##maf version=1 scoring=roast.v3.3 a score=29880.000000 s hg38.chr19_GL383574v1_alt 0 3 + 155864 CAG s panTro5.chr19 36058828 3 + 61309027 CAG i panTro5.chr19 N 0 C 0 s panPan2.chr19 39811017 3 + 64411610 CAG i panPan2.chr19 N 0 C 0 s gorGor5.CYUI01015150v1 6228581 3 - 8369475 CAG i gorGor5.CYUI01015150v1 N 0 C 0 s nomLeu3.chr10 63827421 3 - 106955855 CGG i nomLeu3.chr10 N 0 C 0 s rheMac8.chr19 30126824 3 + 53671032 CAG i rheMac8.chr19 N 0 C 0 s macFas5.chr19 34575031 3 + 59248254 CAG i macFas5.chr19 N 0 C 0 s macNem1.NW_012011689v1 4446000 3 - 13342542 CAG i macNem1.NW_012011689v1 N 0 C 0 s cerAty1.NW_012005268v1 5381126 3 + 7714307 CAG i cerAty1.NW_012005268v1 N 0 C 0 s manLeu1.NW_012102454v1 798368 3 - 2385121 CAG i manLeu1.NW_012102454v1 N 0 C 0 s colAng1.NW_012111697v1 2249520 3 + 4274983 CAG i colAng1.NW_012111697v1 N 0 C 0 s calJac3.chr22 28478018 3 + 49145316 CAT i calJac3.chr22 N 0 C 0 s saiBol1.JH378197 5321563 3 + 8899380 CAG i saiBol1.JH378197 N 0 C 0 s cebCap1.NW_016107633v1 1536381 3 - 2680843 CAG i cebCap1.NW_016107633v1 N 0 C 0 s aotNan1.NW_018505377v1 286605 3 - 4471408 CAG i aotNan1.NW_018505377v1 N 0 C 0 s canFam3.chr1 4548859 3 - 122678785 CAG i canFam3.chr1 N 0 C 0 a score=720599.000000 s hg38.chr19_GL383574v1_alt 3 62 + 155864 CTAACAAAGT-AACACCAATATGGTACCCAGGTCGCATAAGCACTCAAGTGTATCCAGAAAGA s panTro5.chr19 36058831 62 + 61309027 CTAACAAAGT-AACACCAATACGGTACCCAGGTCGCATAAGCACTCAAGTGTATCCAGAAAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39811020 62 + 64411610 CTAACAAAGT-AACACCAATATGGTACCCAGGTCGCATAAGCACTCAAGTGTATCCAGAAAGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6228584 62 - 8369475 CTAACAAAGT-AACACCAATATGGTACCCAGGTCGCATAAGCACTCAAGTGTATCCAGAAAGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63827424 62 - 106955855 CTAACAAAGT-AACACCAATATGGTACCCAGGTCGCATAAGCACTCAAGTGTATCCAGAAAGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30126827 62 + 53671032 CTAACAAAAT-AACACCAATATGGTACCCAGGTCACATAAGCACTCAAGTGTATCCAGAAAGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34575034 62 + 59248254 CTAACAAAAT-AACACCAATATGGTACCCAGGTCACATAAGCACTCAAGTGTATCCAGAAAGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4446003 62 - 13342542 CTAACAAAAT-AACACCAATATGGTACCCAGGTCACATAAGCACTCAAGTGTATCCAGAAAGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5381129 62 + 7714307 CTAACAAAAT-AACACTAATATGGTACCCAGGTCGCATAAGCACTCAAGTGTATCCAGAAAGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29189248 62 + 50890351 CTAACAAAAT-AACACTAATATGGTACCCAGGTCGCATAAGCACTCAAGTGTATCCAGAAAGA i chlSab2.chr6 N 0 C 0 s manLeu1.NW_012102454v1 798371 62 - 2385121 CTAACAAAAT-AACACTAATATGGTACCCAGGTCGCATAAGCACTCAAGTGTATCCAGAAAGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2249523 62 + 4274983 CTAACAAAAT-AATACCAATATGGTACCCAGGTCGCATAAGCACTCAAGTGTATCCAGAAAGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28478021 62 + 49145316 CTAACAAAAT-AACACCAATATGGTACCCAGGTCACATAAGCACTCAAGTGTATCCAGAAAGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5321566 62 + 8899380 CTAACAAAAT-AACACCAATATGGTACCCAGATCACATAAGCACTCAAGTGTATCCAAAAAGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1536384 62 - 2680843 CTAACAAAAT-AACACCAATATGGTACCCAGATCACATAAGCACTCAAGTGTATCCAGAAAGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 286608 62 - 4471408 CTAACAAAAT-AACACCAATATGGTACCCAGATCACATAAGCACTCAAATGTATCCAGAAAGA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4548862 63 - 122678785 CTAACTACGTAAACACCAATATGGTGCCCGGATCTTGTAAGTGGTGAAGTGTATCTGGAAAGA i canFam3.chr1 C 0 C 0 a score=4423.000000 s hg38.chr19_GL383574v1_alt 65 1 + 155864 T s panTro5.chr19 36058893 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39811082 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6228646 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63827486 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30126889 1 + 53671032 T i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4446065 1 - 13342542 T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5381191 1 + 7714307 T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29189310 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 798433 1 - 2385121 T i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2249585 1 + 4274983 T i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1536446 1 - 2680843 C i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 286670 1 - 4471408 C i aotNan1.NW_018505377v1 C 0 C 0 e canFam3.chr1 4548925 0 - 122678785 C e saiBol1.JH378197 5321628 0 + 8899380 C e calJac3.chr22 28478083 0 + 49145316 C e macFas5.chr19 34575096 0 + 59248254 C a score=16836.000000 s hg38.chr19_GL383574v1_alt 66 6 + 155864 GAGCAA s panTro5.chr19 36058894 6 + 61309027 GAGCAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39811083 6 + 64411610 GAGCAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6228647 6 - 8369475 GAGCAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63827487 6 - 106955855 GAGCAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30126890 6 + 53671032 GACCAG i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4446066 6 - 13342542 GACCAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5381192 6 + 7714307 TAACAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29189311 6 + 50890351 GAACAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 798434 6 - 2385121 TAACAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2249586 6 + 4274983 GACCAG i colAng1.NW_012111697v1 C 0 C 0 e canFam3.chr1 4548925 0 - 122678785 C e aotNan1.NW_018505377v1 286671 0 - 4471408 C e cebCap1.NW_016107633v1 1536447 0 - 2680843 C e saiBol1.JH378197 5321628 0 + 8899380 C e calJac3.chr22 28478083 0 + 49145316 C e macFas5.chr19 34575096 0 + 59248254 C a score=82502.000000 s hg38.chr19_GL383574v1_alt 72 101 + 155864 ttctttttttt-tatatatactttaagttttagggtacatgtgcacaacacacaggttagttacacatgtatacatgtgccatgttggtgtgctgcacccat s panTro5.chr19 36058900 102 + 61309027 Ttcttttttttatatatatactttaagttttagggtacatgtgcacaacgcacaggttagttacacatgtatacatgtgccatgttggtgtgctgcacccat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39811089 102 + 64411610 Ttcttttttttatatatatactttaagttttagggtacatgtgcacaacgcacaggttagttacacatgtatacatgtgccatgttggtgtgctgcacccat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6228653 100 - 8369475 Ttc--ttttttatatatatactttaagttttagggtacatgtgcacaacgcgcaggttagttacacatgtatacatgtgccatgttggtgtgctgcacccat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63827493 94 - 106955855 tttttttt--------tatactttaagttttagggtacatgtgcacaacgtgcaggttagttacataagtatacatgtgccatgttggtgtgctgcacccat i nomLeu3.chr10 C 0 C 0 e chlSab2.chr6 29189317 0 + 50890351 C e canFam3.chr1 4548925 0 - 122678785 C e aotNan1.NW_018505377v1 286671 0 - 4471408 C e cebCap1.NW_016107633v1 1536447 0 - 2680843 C e saiBol1.JH378197 5321628 0 + 8899380 C e calJac3.chr22 28478083 0 + 49145316 C e colAng1.NW_012111697v1 2249592 0 + 4274983 C e manLeu1.NW_012102454v1 798440 0 - 2385121 C e cerAty1.NW_012005268v1 5381198 0 + 7714307 C e macNem1.NW_012011689v1 4446072 0 - 13342542 C e macFas5.chr19 34575096 0 + 59248254 C e rheMac8.chr19 30126896 0 + 53671032 C a score=3276.000000 s hg38.chr19_GL383574v1_alt 173 1 + 155864 t s panTro5.chr19 36059002 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39811191 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6228753 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63827587 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34575096 1 + 59248254 T i macFas5.chr19 C 0 C 0 s calJac3.chr22 28478083 1 + 49145316 T i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5321628 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s canFam3.chr1 4548925 1 - 122678785 T i canFam3.chr1 C 0 C 0 e chlSab2.chr6 29189317 0 + 50890351 C e aotNan1.NW_018505377v1 286671 0 - 4471408 C e cebCap1.NW_016107633v1 1536447 0 - 2680843 C e colAng1.NW_012111697v1 2249592 0 + 4274983 C e manLeu1.NW_012102454v1 798440 0 - 2385121 C e cerAty1.NW_012005268v1 5381198 0 + 7714307 C e macNem1.NW_012011689v1 4446072 0 - 13342542 C e rheMac8.chr19 30126896 0 + 53671032 C a score=26245.000000 s hg38.chr19_GL383574v1_alt 174 6 + 155864 gaGCAA s panTro5.chr19 36059003 6 + 61309027 gaGCAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39811192 6 + 64411610 gaGCAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6228754 6 - 8369475 gagcaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63827588 6 - 106955855 gagcaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34575097 6 + 59248254 GACCAG i macFas5.chr19 C 0 C 0 s calJac3.chr22 28478084 6 + 49145316 GAGCAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5321629 6 + 8899380 GAGCAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1536447 6 - 2680843 GAGCAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 286671 6 - 4471408 GAGCAA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4548926 6 - 122678785 GACCAA i canFam3.chr1 C 0 C 0 e chlSab2.chr6 29189317 0 + 50890351 C e colAng1.NW_012111697v1 2249592 0 + 4274983 C e manLeu1.NW_012102454v1 798440 0 - 2385121 C e cerAty1.NW_012005268v1 5381198 0 + 7714307 C e macNem1.NW_012011689v1 4446072 0 - 13342542 C e rheMac8.chr19 30126896 0 + 53671032 C a score=1843478.000000 s hg38.chr19_GL383574v1_alt 180 177 + 155864 TTCTTTAAAATGTGATCCCATGAAATATTTCTAACTTTTCACA-ATCTCAAAAAGTAAGTGACAGCTATTGCTCTAAAT---ATCACTTTCAATAATATAGTACTTGTAGCAAGGCATCCTATAAT-------TTTAAGAGCTACATAATGTAAATTACGTAATTTACATAATTATTATAATATAGTA s panTro5.chr19 36059009 177 + 61309027 TTCTTTAAAATGTGATCCCATGAAATATTTCTAACTTTTCACA-GTCTCAAAAAGTAAGTGACAGCTATTGCTCTAAAT---ATCACTTTCAATAATATAGTACTTGTAGCAAGGCATCCTATAAT-------TTTAAGAGCTACATAATGTAAATTATGTAATTTACATAATTATTATAATATAGTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39811198 177 + 64411610 TTCTTTAAAATGTGATCCCATGAAATATTTCTAACTTTTCACA-GTCTCAAAAAGTAAGTGACAGCTATTGCTCTAAAT---ATCACTTTCAATAATATAGTACTTGTAGCAAGGCATCCTATAAT-------TTTAAGAGCTACATAATGTAAATTATGTAATTTACATAATTATTATAATATAGTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6228760 169 - 8369475 ttctttaaAATGTGATCCCATGAAATATTTCTAACTTTTCACA-ATCTCAGAAAGTAAGTGACAGCTATTGCTCTAAAT---ATCACTTTCAATAATATAGTACTTGTAGCAAGGCATCCTATAAT-------CTTAAGAGCTAC--------TGCTATGTAATTTACATAATTATTATAATATAGTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63827594 169 - 106955855 ttctttaaAATGTGATCCCATGAAATATTTCTAACTTTTCACA-ATCTCAAAAAGTAAGTGACAGCTATTGCTCTAAAT---ATCACTTTCAATAATATAATACTTGTAGCAAGGCATCCTATAAT-------TTTAAGAGCTAC--------TGCTACGTAATTTACATAATTACTATAATATAGTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30126896 169 + 53671032 TTCTTTAAAATGTGATCCCATGAAATATCTCTACCTTTTCACA-ATCTCAAAAGGCAAGTGACAGGTATTGCTCTAAAT---ATCACTTTCAATAATATAATACTTGTGGCAAGGTATCCTATAAT-------TTTAAGAGCTAC--------TGCTATGTAATTTACATAATTACTATAATATAGTA i rheMac8.chr19 C 0 I 15 s macFas5.chr19 34575103 169 + 59248254 TTCTTTAAAATGTGATCCCATGAAATATCTCTACCTTTTCACA-ATCTCAAAAGGCAAGTGACAGGTATTGCTCTAAAT---ATCACTTTCAATAATATAATACTTGTGGCAAGGTATCCTATAAT-------TTTAAGAGCTAC--------TGCTATGTAATTTACATAATTACTATAATATAGTA i macFas5.chr19 C 0 I 15 s macNem1.NW_012011689v1 4446072 169 - 13342542 TTCTTTAAAATGTGATCCCATGAAATATCTCTACCTTTTCACA-ATCTCAAAAGGCAAGTGACAGGTATTGCTCTAAAT---ATCACTTTCAATAATATAATACTTGTGGCAAGGTATCCTATAAT-------TTTAAGAGCTAC--------TGCTATGTAATTTACATAATTACTATAATATAGTA i macNem1.NW_012011689v1 C 0 I 15 s cerAty1.NW_012005268v1 5381198 169 + 7714307 TTCTTTAAAATGTGATCCCATGAAATATCTCTACCTTTTCACA-ATCTCAAAAGGCAAGTGACAGGTATTGCTCTAAAT---ATCACTTTCAATAATATAATACTTGTGGCAAGGTATCCTATAAT-------TTTAAGAGCTAC--------TGCTATGTAATTTACATAATTACTATAATATAGTA i cerAty1.NW_012005268v1 C 0 I 283 s chlSab2.chr6 29189317 169 + 50890351 TTCTTTAAAATGTGATCCCATGAAATATCTCTACCTTTTCACA-ATCTCAAAAGGCAAGTGACAGGTATTGCTCTAAAT---ATCACTTTCAATAATATAATACTTGTGGCAAGGTATCCTATAAT-------TTTAAGAGCTAT--------TGCTATGTAATTTACATAATTACTATAATATAGTA i chlSab2.chr6 C 0 I 15 s manLeu1.NW_012102454v1 798440 169 - 2385121 TTCTTTAAAATGTGATCCCATGAAATATCTCTACCTTTTCACA-ATCTCAAAAGGCAAGTGACAGGTATTGCTCTAAAT---ATCACTTTCAATAATATAATACTTGTGGCAAGGTATCCTATAAT-------TTTAAGAGCTAC--------TGCTATGTAATTTACATAATTACTATAATACAGTA i manLeu1.NW_012102454v1 C 0 I 15 s colAng1.NW_012111697v1 2249592 169 + 4274983 TTCTTTAAAATGTGATCCCATGAAATATCTCTACCTTTTCACA-ATCTCAAAAGGTAAGTGACAGGTATTGCTCTAAAT---ATTACTTTCAATAATATAATACTTGTGGCAAGGTATCCTATAAT-------TTTAAGAGCTAC--------TGCTATGTAATTTACATAATCACTATACTATAGTA i colAng1.NW_012111697v1 C 0 I 15 s calJac3.chr22 28478090 169 + 49145316 TTCTTTAAAATGTGATCCCAAGAAATATCTCTAACTTTTTACA-ATCTCAAAAGGTAAGTGACAGGTATTGCTCTAAAT---ATCACTTTCAATAGTATAATACTTGTAGCAAGGCAGCCTATAAT-------TTTAAGAACTAC--------TGCTATGTAATTTACATAATTACTATAATATAGTA i calJac3.chr22 C 0 I 15 s saiBol1.JH378197 5321635 169 + 8899380 TTCTTTAAAATGTGATCCCGAAAAATATCTTTAACTTTTCACA-ATCTCAAAAGGTAAGTGACAGGTATTGCTCTAAAT---ATCACTTTCAATAGTATATTACTTGTAGCAAGGCAGTCTATAAT-------TTTAAGAACTAC--------TGCTATGTAATTTACATAATTACTATAATATAGTA i saiBol1.JH378197 C 0 I 15 s cebCap1.NW_016107633v1 1536453 169 - 2680843 TTCTTTAAAATGTGATCCCAAGAAATATCTCTAACTTTTCACA-ATCTCAAAAGGTAAGTGACAGGTATTGCTCTAAAT---ATCACTTTCAATAGTATAATACTTGTAGCAAGGCAGCCTATAAT-------TTTAAGAACTAT--------TGCTATGTAATTTACATAATTACTATAATATAGTA i cebCap1.NW_016107633v1 C 0 I 15 s aotNan1.NW_018505377v1 286677 169 - 4471408 TTCTTTAAAATGTGATCCCAAGAAATATCTCTAACTTTTCACG-ATCTCAAAAGGTAAGTGACAGGTATTGCTCTAAAT---ATCACTTTCAATAGTATAATACTTGCAGCAAAGCAGCCTATAAT-------TTTAAGAACTAC--------TGCTATGTAATTTACATAATTACTATAATATAGTA i aotNan1.NW_018505377v1 C 0 I 15 s canFam3.chr1 4548932 180 - 122678785 TTCTTTAAAATGTTATTCTATGAAGTACCTCTAACTTTTAATATTTTTTTAGAGATAACTGTTGAGTATTGGTCTAAATATCATCATTTTCAATAAAGTAATACTTTCAGCAAGGCATCCAATAACATCTAAATTTAAGAATTAC--------TGTTATGTAATTTACATAATTACTAGAATATAGTA i canFam3.chr1 C 0 C 0 a score=731794.000000 s hg38.chr19_GL383574v1_alt 357 69 + 155864 -----------A--CTGTTCTTTTCATTATTTTGCTCAG-TGTTTTTACTTTTATCCTAAAATTGCTTTCCATAAACTCCAAA s panTro5.chr19 36059186 69 + 61309027 -----------A--CTGTTCTTTTCATTATTTTGCTCAG-TGTTTTTACTTTTATCCTAAAATTGCTTTCCATAAACTCCAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39811375 69 + 64411610 -----------A--CTGTTCTTTTCATTATTTTGCTCAG-TGTTTTTACTTTTATCCTAAAATTGCTTTCCATAAACTCCAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6228929 69 - 8369475 -----------A--CTGTTCTTTTCATTATTTTGCTCAG-TGTTTTTACTTTTATCCTAAAATTGCTTTCCATAAACTCCAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63827763 69 - 106955855 -----------A--CTGTTCTTTTCATTATTTTGCTCAG-TGTTTTTACTTTTATCCTAAAATTGCTTTCCATAAACTCCAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30127080 68 + 53671032 -----------A--CTGTTATTTTCATTATTTTGCTCAG-TGTTTTTACTTTTATCCTAAAATTGCTTT-CATAAACTCAAAA i rheMac8.chr19 I 15 C 0 s macFas5.chr19 34575287 68 + 59248254 -----------A--CTGTTGTTTTCATTATTTTGCTCAG-TGTTTTTACTTTTATCCTAAAATTGCTTT-CATAAACTCAAAA i macFas5.chr19 I 15 C 0 s macNem1.NW_012011689v1 4446256 68 - 13342542 -----------A--CTGTTATTTTCATTATTTTGCTCAG-TGTTTTTACTTTTATCCTAAAATCGCTTT-CATAAACTCAAAA i macNem1.NW_012011689v1 I 15 C 0 s cerAty1.NW_012005268v1 5381650 68 + 7714307 -----------A--CTGTTATTTTCATTATTTTGCTCAG-TGTTTTTACTTTTATCCTAAAATTGCTTT-CATAAACTCAAAA i cerAty1.NW_012005268v1 I 283 C 0 s chlSab2.chr6 29189501 70 + 50890351 -----------AATTTTTTATTTTCATTATTTTGCTCAG-TGTTTTTACTTTTATCCTAAAATTGCTTT-CATAAACTCAAAA i chlSab2.chr6 I 15 I 253 s manLeu1.NW_012102454v1 798624 68 - 2385121 -----------A--CTGTTATTTTCATTATTTTGCTCAG-TGTTTTTACTTTTATCCTAAAATTGCTTT-CATAAACTCAAAA i manLeu1.NW_012102454v1 I 15 C 0 s colAng1.NW_012111697v1 2249776 69 + 4274983 -----------A--TTGTTATTTTCATTATTTTGCTCAG-TGTTTTTACTTTTATCCTAAAATTGCTTTCCATAAACTCAAAA i colAng1.NW_012111697v1 I 15 C 0 s calJac3.chr22 28478274 69 + 49145316 -----------A--CTGTTCTTTTCATCATGTTGCTCAG-TGTTTTTACTTTTATCCTAAAATTGCTTTCCATAAACTGCAAA i calJac3.chr22 I 15 C 0 s saiBol1.JH378197 5321819 69 + 8899380 -----------A--CTGTTCTTTTTATTATGTTGCTCAG-TGTTTTTACTTTTATCCTAAAATTGCTTTCCATAAACTGCAAA i saiBol1.JH378197 I 15 C 0 s cebCap1.NW_016107633v1 1536637 69 - 2680843 -----------A--CTGTTCTTTTCATTATGTTGCTCAG-TGTTTTTACTTTTATCCTAAAATTGCTTTCCACAAACTGCAAA i cebCap1.NW_016107633v1 I 15 C 0 s aotNan1.NW_018505377v1 286861 69 - 4471408 -----------A--CTGTTCTTTTCATCATGTTGCTCAG-TGTTTTTACTTTTATCCTAAAATTGCTTTCCATAAACTGCAAA i aotNan1.NW_018505377v1 I 15 C 0 s canFam3.chr1 4549112 81 - 122678785 ACATATAATTTA--CTGTTCTTTTCATTATTTTGCTCAATTTTTTTTACCTTTGTTCTAAAATTGTTTTCTATAAACTCTGAA i canFam3.chr1 C 0 C 0 a score=1882910.000000 s hg38.chr19_GL383574v1_alt 426 187 + 155864 AGTTGTT------------------TCTTTTAATACTTTCAGTCTCTAGAGAAAAAGCAATTTTATGAAAGTG-TTTTGCAATAATATATTGATTAATTACTCTATCA-TTTTATTTGCCAATAGTTAGGCCCATTCCTTAGCATAATTTACTTATTTGTCTCTTCATTGACTCAGGCCACCATCAGAACACATAATTATTCATGAT s panTro5.chr19 36059255 187 + 61309027 AGTTGTT------------------TCTTTTAATACTTTCAGTCTCTAGAGAAAAAGCAATTTTATGAAAGTG-TTTTGCAATAATATATTGATTAATTACTCTATCA-TTTTATTTGCCAATAGTTATGCCCATTCCTTAGCATAATTTACTTATTTATCTCTTCATTGACTCGAGCCACCATCAGAACACATAATTATTCACGAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39811444 187 + 64411610 AGTTGTT------------------TCTTTTAATACTTTCAGTCTCTAGAGAAAAAGCAATTTTATGAAAGTG-TTTTGCAATAATATATTGATTAATTACTCTATCA-TTTTATTTGCCAATAGTTATGCCCATTCCTTAGCATAATTTACTTATTTATCTCTTCATTGACTCGAGCCACCATCAGAACACATAATTATTCACGAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6228998 183 - 8369475 AGTTGTT------------------TCTTTTAATACTTTCAGTCTCTAGAGAAAAAGCAATTTTATGAAAGTG-TTTTGCAATAATATATTGATTAATTATTCTATCA-TTTTATTTGCCAATAGTTACACCCATTCCTTAGCATAATTTACTTA----TCTCTTCATTGACTCAGGCCACCATCAGAACACATAATTATTCACGAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63827832 187 - 106955855 AGTTGTT------------------TCTTTTAATACTTTCAGTCTCTAGAAAAAAAGCAATTTTATGAAATTG-TTTTGCAATAATATATTGATTAATTACTCTATCA-TTTTATTTGCCAATAGTTATGCCCATTCCTTAGTGTAATTTACTTATTTATCTCTTCATTGACTCAGGCCACCATCAGAACACGTAATTATTCACGAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30127148 184 + 53671032 AGTTGTT------------------TCTTTTAATACTTTT--TCTCTAGAGAAAAAGCAATTTTATGAAAGTA-TTTTGCAATAACATATTGATTAGTTATTCTATCA-TTTTATTTGGCAATAGTTATACCCATTCCTTAGCATAA-TTACTTATTTATCTCTTCAATGACCCAGGTCACCATCAGAACACATAATTACTTAAGAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34575355 184 + 59248254 AGTTGTT------------------TCTTTTAATACTTTT--TCTCTAGAGAAAAAGCAATTTTATGAAAGTA-TTTTGCAATAACATATTGATTAGTTATTCTATCA-TTTTATTTGGCAATAGTTATACCCATTCCTTAGCATAA-TTACTTATTTATCTCTTCAATGACCCAGGTCACCATCAGAACACATAATTACTCAAGAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4446324 184 - 13342542 AGTTGTT------------------TCTTTTAATACTTTT--TCTCTAGAGAAAAAGCAATTTTATGAAAGTA-TTTTGCAATAACATATTGATTAGTTATTCTATCA-TTTTATTTGGCAATAGTTATACCCATTCCTTAGCATAA-TTACTTATTTATCTCTTCAATGACCCAGGTCACCATCAGAACACATAATTACTTAAGAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5381718 184 + 7714307 AGTTGTT------------------TCTTTTAATACTTTT--TCTCTAGAGAAAAAGCAATTTTATGAAAGTA-TTTTGCAATAACATATTGATTAGTTATTCTATCA-TTTTATTTGGCAATAGTTATACCCATTCCTTAGCATAA-TTACTTATTTATCTCTTCAATGACCCAGGTCACCATCAGAACACATAATTATTCAAGAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29189824 184 + 50890351 AGTTGTT------------------TCTTTTAATACTTTT--TCTCTAGAGAAAAAGCAATTTTATGAAAGTG-TTTTGCAATAACATATTGATTAGTTATTCTATCA-TTTTATTTGGCCATAGTTATACCCATTCCATAGCATAA-TTACTTATTTATCTCTTCAATGACCCAGGTCACCATCAGAACACATAATTACTCAAGAT i chlSab2.chr6 I 253 C 0 s manLeu1.NW_012102454v1 798692 184 - 2385121 AGTTGTT------------------TCTTTTAATACTTTT--TCTCTAGAGAAAAAGCAATTTTATGAAAGTA-TTTTGCAATAACATATTGATTAGTTATTCTATCA-TTTTATTTGGCAATAGTTATACCTATTCCTTAGCATAA-TTACTTATTTATCTCTTCAATGACCCAGGTCACCATCAGAACACATAATTACTCAAGAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2249845 184 + 4274983 AGTTGTT------------------TCTTTTAATACTTTT--TCTCTAGAGAAAAAGCAATTTTATGAAAGTG-TTTTGCAATAACATATTGATTAGTTATTCTATCA-TTTTATTTGGCAATAGTTATACCCATTTCTTAGCATAA-TTACTTATTTATCTCTTCAGTGACCCAGGTCACCATCAGAACACATAATTACTCAAGAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28478343 181 + 49145316 AGTTG--------------------TCTTTTAATACTTTCAGTCTCTAGAGAAAAAGCAATTTTATGAAAGTG-TTTTGCAATAATAT----ATTAGTTACTGTATCA-TTTTATTTGCCAATAGTTATGCCCATTTCTTAGCATAATTTACTTATTTATCTTTTCAATGACTCAGGTCACCATCAGAACACATAATTATGCCAGAT i calJac3.chr22 C 0 I 145 s saiBol1.JH378197 5321888 181 + 8899380 AGTTGTT------------------TCTTTCAATACTTTCAGTTTCTAGAGAAAAAGCAATTTTATGAAAGTG-TTTTACAATAATAT----ATTAGTTACTATATCA-TTTTATTTGCCA--AGTTATGCCCATATCTTAGCATAATTTACTTATTTATCCCTTCAATGACTCCGATCACCATCAGAACACAAAATTATGCAAGAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1536706 183 - 2680843 AGTTGTT------------------TCTTTTAATACTTTCAGTCTCCAGAGAAAAAGCAATTTTATGAAAGTA-TTTTGCAATAATAT----ATTAGTTACTGTATCA-TTTTATTTGCCAACAGTTATGCCCATTTCTTAGCATAATTTACTTATTTATCTCTTCAGTGACTCAGGTCACCATCAGAACACATAATTATGCAAGAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 286930 183 - 4471408 AGTTGTT------------------TCTTTTAATACTTTCAGTCTCTAGAGAAAAAACCATTTTATGAAAGTG-TTTTGCAATAATAT----ATTAGTTACTGTATCA-TTTTATTTGCCAATAGTTATGCCCATTTCTTAGCATAATTTACTTATTTATCTCTTCAATGACTCAGGTCACCATCAGAACACATAATTATGCAAGAT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4549193 206 - 122678785 AGTTGTTCTATCGTAATTTGTTTCATTTTATGATGCTTTGAATCTCCAGGAGAAAGCCATTTTTATGAAAGTGTTTTTGCAATACTATATGGATGAGTTACTCTATCATTTTTATTTGCCAATAGTTATGCCTATA-CTTATCGTAATTTACTTACTTATATCTTCAATAACTCAGGTCACTGTCAGAACACATAATTAGTCAAGAT i canFam3.chr1 C 0 C 0 a score=130393.000000 s hg38.chr19_GL383574v1_alt 613 12 + 155864 AAGAAGTTGGGC s panTro5.chr19 36059442 12 + 61309027 AAGAAGTTGGGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39811631 12 + 64411610 AAGAAGTTGGGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6229181 12 - 8369475 AAGAAGTTGGGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828019 12 - 106955855 AAGAAGTTGGGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30127332 12 + 53671032 AAGAGGTTGGGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34575539 12 + 59248254 AAGAGGTTGGGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4446508 12 - 13342542 AAGAGGTTGGGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5381902 12 + 7714307 AAGAGGTTGGGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29190008 12 + 50890351 AAGAGGTTGGGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 798876 12 - 2385121 AAGAGGTTGGGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2250029 12 + 4274983 AAGAGGTTGGGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28478669 12 + 49145316 AAAAGGTTGGGT i calJac3.chr22 I 145 C 0 s saiBol1.JH378197 5322069 12 + 8899380 AAAAAGTTGggc i saiBol1.JH378197 C 0 I 142 s cebCap1.NW_016107633v1 1536889 12 - 2680843 AAAAGGTTGggc i cebCap1.NW_016107633v1 C 0 I 144 s aotNan1.NW_018505377v1 287113 12 - 4471408 AAAAGGTTGggc i aotNan1.NW_018505377v1 C 0 I 141 s canFam3.chr1 4549399 12 - 122678785 ATGAGGTAGAGC i canFam3.chr1 C 0 I 1 a score=1173263.000000 s hg38.chr19_GL383574v1_alt 625 113 + 155864 AAAGCAGGAATTTTGCACACAAAGAGGTAGAGCCGAATCAGATATTGAGTACA-----TTAATTTCTTTTGTAACTGggtgctgtaataagagagctgaggcttggactttaaaactt------------- s panTro5.chr19 36059454 113 + 61309027 AAAGCAGGAATTTTGCACACAAAGAGGTAGAGCCGAATCAGATATTGAGTACA-----TTAATTTCTTTTGTAACTGggtgctgtaataagagagctgaggcttggactgtaaaactt------------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39811643 113 + 64411610 AAAGCAGGAATTTTGCACACAAAGAGGTAGAGCCGAATCAGATATTGAGTACA-----TTAATTTCTTTTGTAACTGggtgctgtaataagagagctgaggcttggactttaaaactt------------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6229193 113 - 8369475 AAAGCAGGAATTTTGCACACAAAGAGGTAGAGCTGAATCAGATATTGAGTACA-----TTAATTTCTTTTGTAACTGggtgctgtaataagagagctgaggcttggactttaaaactt------------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828031 110 - 106955855 AAAGCAGGAATTTTGCACACAAAGAGGTAGAGCCGAATCAGATATTGAGTACA-----TTAATTTCTTTTGTAACTGggtgctgtaataagagagctgag--cttgacttt-aaactt------------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30127344 113 + 53671032 AAAGCAGGAATTTTGCACACTAAGAGGTAGAGCCATATCAGTTATTGAGTACG-----TTAATTTCTTTTGTAACTGGGTGCTGTAATAAAAGAGCTGAGGCTTGGACTTTAAAACTT------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34575551 113 + 59248254 AAAGCAGGAATTTTGCACACTAAGAGGTAGAGCCATATCAGTTATTGAGTACG-----TTAATTTCTTTTGTAACTGGGTGCTGTAATAAAAGAGCTGAGGCTTGGACTTTAAAACTT------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4446520 113 - 13342542 AAAGCAGGAATTTTGCACACTAAGAGGTAGAGCCATATCAGTTATTGAGTACG-----TTAATTTCTTTTGTAACTGGGTGCTGTAATAAAAGAGCTGAGGCTTGGACTTTAAAACTT------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5381914 113 + 7714307 AAAGCAGGAATTTTGCACACTAAGAGGTAGAGCCATATCAGTTATTGAGTACG-----TTAATTTCTTTTGTAACTGGGTGCTGTAATAAAAGAGCTGAGGCTTGGACTTTAAAACTT------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29190020 113 + 50890351 AAAGCAGGAATTTTGCACACTAAGAGGTAGAGCCATATCAGTTATTGAGTACG-----TTAATTTCTTTTGTAACTGGGTGCTGTAATAAAAGAGCTGAGGCTTGGACTTTAAAACTT------------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 798888 113 - 2385121 AAAGCAGGAATTTTGCACACTAAGAAGTAGAGCCGTATCAGTTATTGAGTACG-----TTAATTTCTTTTGTAACTGGGTGCTGTAATAAAAGAGCTGAGGCTTGGACTTTAAAACTT------------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2250041 113 + 4274983 AAAGCAGGAATTTTGCACACTAAGAGGTAGAGCCATATCAGTTATTGAGTACG-----TTAATTTCTTTTGTAACTGGGTGCTGTAATAAAAGAGCTGAGGCTTGGACTTTAAAACTT------------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28478681 118 + 49145316 AAAGCAGGAATTTTGCACACAAAGAGGTAGAGCCGAATCAGTTATTGAGTATATTAATTTAATTTCTTTTGTACCTGGGTGCTGTAATAAAAGAGCTGAAGCTTGGACTTTAAAACTT------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5322223 117 + 8899380 AAAGTAGGAATTTTGCACACAAAGAGGTAGAGCCAAATCAGTTATTGAGTACATTAATTTAATTTCTTTTGTA-ATGGGTGCTCTAATAAAAGAGCTGAGGCTTGGACTTTAAAACTT------------- i saiBol1.JH378197 I 142 C 0 s cebCap1.NW_016107633v1 1537045 118 - 2680843 AAAGTAGGAATTTTGCACACAAAGAGGTAGAACCAAATCACTTATTGAGTGCATTAATTTAATTTCTTTTGTAACTGGGTGCTATAATAAAAGAGCTGAGGCTTGGACTTTAAAACTT------------- i cebCap1.NW_016107633v1 I 144 I 289 s aotNan1.NW_018505377v1 287266 118 - 4471408 AAAGTAGGAATTTTGCACACAAAGAGGTAGAGCCGAATCAGTTATTGAGTACATTAATTTAATTTCTTTTGTAACTGGGTGCTGTAATAAAAGAGCTGAGGCTTGGACTTTAAAACTT------------- i aotNan1.NW_018505377v1 I 141 C 0 s canFam3.chr1 4549412 108 - 122678785 AAAACAGGAGTTTTGCACACAAGGATACAGAGCTGAATCAGTCA--------------TTACTTTCTCTTCTAGCTGGGTA-------GACAGAACTGAGGTTTGGAA--TGAGATTTGGATTGAGAAGCC i canFam3.chr1 I 1 C 0 a score=74904.000000 s hg38.chr19_GL383574v1_alt 738 7 + 155864 gtg-gtac s panTro5.chr19 36059567 7 + 61309027 gtg-gtac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39811756 7 + 64411610 gtg-gtac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6229306 7 - 8369475 gtg-gtac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828141 7 - 106955855 gtg-gtac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30127457 7 + 53671032 GTG-GTAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34575664 7 + 59248254 GTG-GTAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4446633 7 - 13342542 GTG-GTAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5382027 7 + 7714307 GTG-GTAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29190133 7 + 50890351 GTG-GTAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 799001 7 - 2385121 GTG-GTAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2250154 7 + 4274983 GTG-GTAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28478799 7 + 49145316 GTG-GTAC i calJac3.chr22 C 0 I 300 s saiBol1.JH378197 5322340 7 + 8899380 GTG-GTAC i saiBol1.JH378197 C 0 I 303 s cebCap1.NW_016107633v1 1537452 7 - 2680843 GTG-GTAG i cebCap1.NW_016107633v1 I 289 C 0 s aotNan1.NW_018505377v1 287384 7 - 4471408 GTG-GTAC i aotNan1.NW_018505377v1 C 0 I 310 s canFam3.chr1 4549520 8 - 122678785 ATGAATGC i canFam3.chr1 C 0 C 0 a score=2069744.000000 s hg38.chr19_GL383574v1_alt 745 257 + 155864 aaatcttgacccagccgtcaaccac-ctcaagtcaagactatcaccttccccagcccttagtgcccccactatcgagaga--ggaacttggtgatactggttc----ctgtacaacacaggtagtatgacgatcaagtgataaaatgcttataagagagcattAATACCAGTGACATCAATGTGCTAGTTGTTATC---TCATGACATGCAAAGTCTTCTCATTGGATCATGATTCCCAATACTGTCATGGCATTGCTTTCCTTTGA s panTro5.chr19 36059574 257 + 61309027 aaatcttgacccagccgtcaaccac-ctcaagtcaagactatcaccttccccagcccttagtgcccccactatcaagaga--ggaacttggtgatactggttc----ctgtacagtacaggtagtatgacgatcaagtgataaaatgcttataagagagcattAATACCGGTGACATCAATGTGCTAGTTGTTATC---TCATGACATGCAAAGTCTTCTCATTGGATCATGATTCCCAATACTGTCATGGCATTGCTTTCCTTTGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39811763 257 + 64411610 aaatcttgacccagccgtcaaccac-ctcaagtcaagactatcaccttccccagcccttagtgcccccactatcaagaga--ggaacttggtgatactggttc----ctgtacagtacaggtagtatgacgatcaagtgataaaatgcttataagagagcattAATACCGGTGACATCAATGTGCTAGTTGTTATC---TCATGACATGCAAAGTCTTCTCATTGGATCATGATTCCCAATACTGTCATGGCATTGCTTTCCTTTGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6229313 257 - 8369475 aaatcttgacccagccgtcaaccac-ctcaagtcaagactatcaccttccccagcccttagtgcccccactatcaagaga--ggaacttggtgatactggttc----ctgtacaatacaggtagtatgacgatcaagtgataaaatgcttataagagagcattAATACCGGTGACATCAATGTGCTAGTTGTTATC---TCATGACATGCAAAGTCTTCTCATTGGATCATGATTCCCAATACTGTCATGGCATTGCTTTCCTTTGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828148 249 - 106955855 aaatcttgacccagccgtcaacccctctcaagtcaagactatcaccttccccagcccttagtgcccccactatcaaaaga--ggaacttggtgatactgattc----ctgtacaacacaggtagtatgaagatcaagtgataaaatgcttataagagagcgttAATACCGGTGACATTAATGTGCTAGTTGTTATC---TCATGACATGCAAAGTCTTCTCATTGGATCATGCTTCC---------CATGGCATTGCTTTCCTTTGA i nomLeu3.chr10 C 0 I 100 s rheMac8.chr19 30127464 197 + 53671032 AAATCTTGACCCAGCTGTCAACCAC-CTCAAGTCAAGACTATCACCTTCCCCGGCCCTTAGTG---CCATTATCAAGAGA--GGAA-------------------------------------------------------------CTTACAAGAAAGCATTAATACCGGTGATATTAATGTGCTAGTTGTTATC---TCATGATGTGCAAAGTCTTCTCATTGGATCATGATTCCCAGTGCTGTCATGGCATTGCTTTCCTTTGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34575671 197 + 59248254 AAATCTTGACCCAGCTGTCAACCAC-CTCAAGTCAAGACTATCACCTTCCCCGGCCCTTAGTG---CCATTATCAAGAGA--GGAA-------------------------------------------------------------CTTACAAGAAAGCATTAATACCGGTGATATTAATGTGCTAGTTGTTATC---TCATGATGTGCAAAGTCTTCTCATTGGATCATGATTCCCAGTGCTGTCATGGCATTGCTTTCCTTTGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4446640 197 - 13342542 AAATCTTGACCCAGCTGTCAACCAC-CTCAAGTCAAGACTATCACCTTCCCCGGCCCTTAGTG---CCATTATCAAGAGA--GGAA-------------------------------------------------------------CTTACAAGAAAGCATTAATACCGGTGATATTAATGTGCTAGTTGTTATC---TCATGATGTGCAAAGTCTTCTCATTGGATCATGATTCCCAGTGCTGTCATGGCATTGCTTTCCTTTGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5382034 197 + 7714307 AAATCTTGACCCAGCTGTCAACCAC-CTCAAGTCAAGACTATCACCTTCCCCGGCCCTTAGTG---CCATTATCAAGAGA--GGAA-------------------------------------------------------------CTTACAAGAAAGCATTAATACCGGTGATATTAATGTGCTAGTTGTTATC---TCATGATGTGCAAAGTCTTCTCATTGTATCATGATTCCCAGTGCTGTCATGGCATTGCTTTCCTTTGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29190140 197 + 50890351 AAATCTTGACCCAGCTGTCAACCAC-CTCAAGTCAAGACTATCACCTTCCCCGGCCCTTAGTG---CCATTATCAAGAGA--GGAA-------------------------------------------------------------CTTACAAGAAAGCGTTAATACCGGTGATATTAATGTGCTAGTTATTATT---TCATGATGTGCAAAGTCTTCTCATTGGATCATGATTCCCAGTGCTGTCATGGCATTGCTTTCCTTTGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 799008 197 - 2385121 AAATCTTGACCCAGCTGTCAACCAC-CTCAAGTCAAGACTGTCACCTTCCCCGGCCCTTAGTG---CCATTATCAAGAGA--GGAA-------------------------------------------------------------CTTACAAGAAAGCATTAATACCGGTGATACTAATGTGCTAGTTGTTATC---TCATGATGTGCAAAGTCTTCTCATTGGATCATGATTCCCAGTGCTGTCATGGCATTGCTTTCCTTTGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2250161 197 + 4274983 AAATCTCGACCCAGCTATCAACCAC-CTCAAGTCAAGACTATCACCTTCCCCGGCCCTTAGTG---CCATTATCAAGAGA--GGAA-------------------------------------------------------------CTTATAAGAAAGCGTTAATACCGGTGACAATAATGTGCTAGTTGTTATC---TCATGACATGCAAAGTCTTCTCATTGAATCATGATTCCCAGTGCTGTCATGGCATTGCTTTCCTTTGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28479106 252 + 49145316 AAATCTTGGCCCAACCATCAACTAC-CTCAAGTCAACACTATCACCTTTCCCAGCCCTTAGTGCCCCCACTATCAAAAGA--GGAA---CTTGATAGTGGTTC----CCGTTCAACACAGGTAGTATGACGATCAAGTGATAAAATGCTTTTAAGAGAATGTTAATACTGGTGACATTAATGTGCTAGTTGTTATC---TCATGGCATGC--AGTCTTCTCATTGGATCATGATTCCCAATGCTGTCATGGCATTGCTTTCCTTTGA i calJac3.chr22 I 300 C 0 s saiBol1.JH378197 5322650 254 + 8899380 AAATCTTGGCCTAACAATCAACCAC-CTCAAGTCAACACTATCACCTTTCCCAGCCCTTAGTGCCCCCACTATCAAGAGA--GGAA---CTTGATAGTGGTTC----CTGTTCAACACAGGTAGTATGAAGATCAAGTGATAAAATGCTTTTAAGAGAAAGTTAATACTGGTGACATTAATGTGCTAGTTGTTATC---TCATGACATGCAAAGTCTTCTCATTGGATCATGATTCCCAGTGCTGTCATGGCATTGCTTTCCTTTGA i saiBol1.JH378197 I 303 C 0 s cebCap1.NW_016107633v1 1537459 252 - 2680843 AAATCGTGACCCAACCATCAACCAC-CTCAAGTCAACACTATCACCTTTCCCAGCCCTTAGTGCCCCC-CCATCAAGAGA--GGAA---CTTGATAGTGGTTC----CCGTTCAACACAGGTAGTATGAAGATCAAGTGATAAAATGCTTTTAAGAGAACATTAATACT-GTGACATTAATGTGCTAGTTGCTATC---TCACGACATGCAAAGTCTTCTCATTGGATCATGATTCCCAATGCTGTCATGGCATTGCTTTCCTTTGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 287701 254 - 4471408 AAATCTTGGCCCAACCATCAACCAC-CTCAAGTCAACACTATCACCTTTCCCAGCCCTTAGTGCCCCCACTATCAAGAGA--GGAA---CTTGATAGTGGTTC----TCATTCAACACAGGTAGTATGAAGATCAAGTAATAAAATGCTTTTAAGGGAACGTTAATACTGGTGACATTAATGTGCTAGTTGTTATC---TCATGACATGCAAAGTCTTCTCATTGGATCATGATTCCCAATGCTGTCATGGCATTGCTTTCCTTTGA i aotNan1.NW_018505377v1 I 310 C 0 s canFam3.chr1 4549528 253 - 122678785 TGGTCTTTGCTTAGCCATTAATCCT-CTGAGGTCAAAACCACCAACTTCCCTGGCCCTTAGTTTTCTCCCCACTGGAAAACTGGAGCATGATAATACTGGTTCTCTGCTCTGTAATGCAGGTCATAGGAAGATGAAATGATAAAAGGCT------------TTATTACTAGT-ACATTCATGTGCCAGTTGTTATCATTTCATGACATGTAAAGGCTGTGCATGGGACCATGATCCCTAACGCTGTAGTGGCATTCCTTTCCTTTGA i canFam3.chr1 C 0 C 0 a score=49263.000000 s hg38.chr19_GL383574v1_alt 1002 5 + 155864 CAGAT s panTro5.chr19 36059831 5 + 61309027 CAGAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39812020 5 + 64411610 CAGAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6229570 5 - 8369475 CAGAT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30127661 5 + 53671032 CAGAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34575868 5 + 59248254 CAGAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4446837 5 - 13342542 CAGAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5382231 5 + 7714307 CAGAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29190337 5 + 50890351 CAGAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 799205 5 - 2385121 CAGAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2250358 5 + 4274983 CAGAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28479358 5 + 49145316 CAGAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5322904 5 + 8899380 CAGAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1537711 5 - 2680843 CAGAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 287955 5 - 4471408 CAGAC i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4549781 5 - 122678785 CAGAT i canFam3.chr1 C 0 I 2753 e nomLeu3.chr10 63828397 100 - 106955855 I a score=2962612.000000 s hg38.chr19_GL383574v1_alt 1007 343 + 155864 tgtgatggttggtttttcatgacaacttggctaggctaagggatgggcagatcactgg-tacaacattatttctgggtgtgtctgtgcagatgcttctggaatagattagcatttgaaacaggtgactgagtaaagattactctcacccatgtgggtgggcatcatccaatctattgagaccctg-----------aatagaacaaaaagacAAGAggccaggcatagtggttcacatctgtaatcccagcattttgggaggccaaggcaggaggattgcttgaggccaggtgttcaagaccagtctgggcaacagagtgagatcttgtctctacaaaaaatttaaaaattagtg s panTro5.chr19 36059836 343 + 61309027 tgtgatggttaatttttcatgacaacttggctaggctaagggatgcgcagatcactgg-tacaacattatttcttggtgtgtctgtgcagatgcttctggaatagattagcatttgaaatgggtgactgagtaaagattactctcacccatgtgggtgggcatcatccaatctattgagaccctg-----------aatagaacaaaaagacAAGAggccaggcatagtggttcacacctgtaatcccagcattttgggaggccaaggcaggaggattgcttgaggccaggtgttcaagaccagtctgggcaacagagtgagatcttgtctctacaaaaaatttaaaaattagtg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39812025 343 + 64411610 tgtgatggttaatttttcgtgacaacttggctaggctaagggatgcgcagatcactgg-tacaacattatttcttggtgtgtctgtgcagatgcttctggaatagattagcatttgaaacgggtgactgagtaaagattactctcacccatgtgggtgggcatcatccaatctattgagaccctg-----------aatagaacaaaaagacAAGAggccaggcatagtggttcacacctgtaatcccagcattttgggaggccaaggcaggaggattgcttgaggccaggtgttcaagaccagtctgggcaacagagtgagatcttgtctctgcaaaaaatttaaaaattagtg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6229575 342 - 8369475 tgtgatggttgatttttcatgacaacttggctaggctaagggatgcgcagatcactgg-tacaacattatttctgggtgtgtctgtgcagatgcttctggaatagattagcatttgaaacaggtgactgagtaaagattactctcacccatgtgggtgggcatcatccaatctattgagaccctg-----------aatagaacaaaaagacAAGAggccaggcatagtggttcacacctgtaatcccagcattttggga-gccaaggcaggaggattgcttgaggccaggtgttcaagaccagtctgggcaacagagtgagatcttgtctctacaaaaaatttaaaaattagtg i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30127666 340 + 53671032 tgtgatggttaatttctcatgacaacttggctaggctaagggatgcccagatcactgg-tacaacattatttctgggtatgtctgtgcagatgcttctggaatagattagcatttgaaacaggtaactgagtaaacattactctcaaccatgtaggcaggcatcatccaatttac-gagaccctg-----------aatagaacaaaaagacAAGAggccaggtatagtggttcacgcctgtaatcccagcattttgggaggccaaggcaggaggattgcttgaggccaggtgttcaagaccagcctgggca--agagtgagatcttgtctctacaaaaaaattaaaaattagtg i rheMac8.chr19 C 0 I 4070 s macFas5.chr19 34575873 340 + 59248254 tgtgatggttaatttctcatgacaacttggctaggctaagggatgcccagatcactgg-tacaacattatttctgggtatgtctgtgcagatgcttctggaatagattagcatttgaaacaggtaactgagtaaacattactctcaaccatgtaggcaggcatcatccaatttac-gagaccctg-----------aatagaacaaaaagacAAGAggccaggtatagtggttcacgcctgtaatcccagcattttgggaggccaaggcaggagaattgcttgaggccaggtgttcaagaccagcctgggca--agagtgagatcttgtctctacaaaaaaattaaaaattagtg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4446842 340 - 13342542 tgtgatggttaatttctcatgacaacttggctaggctaagggatgcccagatcactgg-tacaacattatttctgggtatgtctgtgcagatgcttctggaatagattagcatttgaaacaggtaactgagtaaacattactctcaaccatgtaggcaggcatcatccaatttac-gagaccctg-----------aatagaacaaaaagacAAGAggccaggtatagtggttcacgcctgtaatcccagcattttgggaggccaaggcaggaggattgcttgaggccaggtgttcaagaccagcctgggca--agagtgagatcttgtctctacaaaaaaattaaaaattagtg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5382236 340 + 7714307 tgtgatggttaatttctcatgacaacttggctaggctaagggatgcccagatcactgg-tacaacattatttctgggtatgtctgtgcagatgcttctggaatagattagcatttgaaacaggtaactgagtaaagattactctcaaccatgtaggcaggcatcattcaatttac-gagaccctg-----------aatagaacaaaaagacAAGAggccaggtatagtggttcacgcctgtaatcccagcattttgggaggccaaggcaggaggattgcttgaggccaggtgttcaagaccagcctgggca--agagtgagatcttgtctctacaaaaaaattaaaaattagtg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29190342 341 + 50890351 tgtgatggttaatttctcatgacaacttggctaggctaagggatgcccagatcactgg-tacaacattatttctgggtatgtctgtgcagaggcttctggaatagattagcatttgaaacaggtaactgagtaaagattactctcatccatgtaggcaggcatcatccaatttactgagaccctg-----------aatagaacaaaaagacAAGAggccaggtatagtggttcacgcctgtaatcccagcattttgggaggccaaggcaggaggattgcttgaggccaggtgttcaagaccagcctgggca--agcgtgagatcttgtctctacaaaaaaattaaaaattagtg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 799210 340 - 2385121 tgtgatggttaatttctcatgacaacttggctaggctaagggatgcccagatcactgg-tacaacattatttctgggtatgtctgtgcagatgcttctggaatagattagcatttgaaacaggtaactgagtaaacattagtctcaaccatgtaggcaggcatcatccaatttac-gagaccctg-----------aatagaacaaaaagacAAGAggccaggtatagtggttcacgcctgtaatcccagcattttgggaggccaaggcaggaggattgcttgaggccaggtgttcaagaccagcctgggca--agagtaagatcttgtctctacaaaaaaattaaaaattagtg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2250363 342 + 4274983 tgtgatggttaatttctcatgacaacttggctaggctaagggatgcccagatcactggttacaacattatttctgggtatgtctgtgcagatgcttctggaatagattagcatttgaaacaggtaactgagtaaagattactctcaaccatgtaggcaggcatcatccaatctattgagactctg-----------aatagaacaaaaagacAAGAggccgggtatagtggttcacgcctgtaatcccagcattttgggaggccagggcaggaggattgcttgaggccaggtgtttaagaccagcctgggca--agagtgagatcttgtctctacaaaaaatttaaaaattagcg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28479363 353 + 49145316 tgtgatggttaatttctcatgacaacttggctaggctaagggatgcccgaatcactgg-tacaacattatttctgggtgtgtctgtgcagatgtttctggaatagattagcacttgaaacaggtgactgagtaaagattactctcacccatgtggatggacatcatccaatctattgagaccctgaataaaaaaaaaaTAGAACAAAAAGACAAGAGGGTAGACATAAtgactcacacttgtaatcacagcattttgagaggccaaggcaggaggattgcttaaagccaggtgttcaagaccagcctgggcaacagagtgagatcttttctcta-aaaaaaaataaaaaTTAGTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5322909 342 + 8899380 tgtgatggttaatttctcatgacaacttggctaggctaagggatgcccaaatcactgg-tacaacattatttctgtgtttgtctgtgcagatgcttctggaatagattagcacttgaaacaggtgactgagtaaagattactcccaccaatgtggatagacatcatccaatctattgagaccctg-----------aatagaacaaaaagacaagaggGcagacatagtgactaacacttgtaattgcagcattttgggaggccaaggtaggaggattgcttgaagccaggtgttcaagaccagcctgggcaacagagtgagatcttgtctcta-aaaaaaaTTTTTAAATAGTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1537716 341 - 2680843 tatgatggttaatttctcatgacaacttggctaggctaagggatgcccaaatcactgg-tacaacattatttcttggtgtgtctgtgcagatgcttctgaaataggttagcacttgaaacaggtgactgagtaaagattactctcatccatgtggatggacatcatccaatctattgagaccctg-----------aatagaacaaaaagacaagagggcagacatagtgactcacacttgtaattgcagca-tttgggaggccaaggcaggaggattgcttgaagccagatgttcaagactagcctggggaacagagtgagatcttgtctcta-aaaaaattttttaaatagtg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 287960 341 - 4471408 tgtgatggttaatttctcatgacaacttggctaggctaaaggatgcccaaatcactgg-tacaacattatttctgggtgtgtctgtgcagatgcttctggaatagattagcacttgaaacaggtgactgagtaaagattactctcacccatgtggatggacatcatccaaaccattgagacccca-----------aatagaacaaaaagacaagaggGcagacacaatgactcacacgtgtaatcacagcatttttggaggccaaggcaggaggactgcttgaagccaggtgttcaagaccagcctgggcaacagagtgagatcttgtctcta-aaaaaa-ttaaaaaTTAGTG i aotNan1.NW_018505377v1 C 0 C 0 e canFam3.chr1 4549786 2753 - 122678785 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=1056560.000000 s hg38.chr19_GL383574v1_alt 1350 141 + 155864 tggcgtggtggtgagatgggatttgttcccttgaccttcacccccttcatgggcgagaactggagtggctcatttcgctcagcctgccgctggccactccttgcaagagggagcgtgtgagcaagcgagtgtgggaaccag s panTro5.chr19 36060179 141 + 61309027 tggcgtggtggtgagatgggatttgttcccttgaccttgacccccttcatgggcgagaactggagtggctcatttcgctcagcctgccgctggccactccttgcaagagggagcgtgtgagcaagcgagtgtgggaaccag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39812368 141 + 64411610 tggcgtggtggtgagatgggatttgttcccttgaccttgacccccttcatgggcgagaactggagtggctcatttcgctcagcctgccgctggccactccttgcaagagggagcgtgtgagcaagcgagtgtgggaaccag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6229917 141 - 8369475 tggcgtggtggtgagatgggatttgttcccctgaccttgacccccttcatgggcgataactggagtggctcatttcgctcagcctgccgctggccactccttgcaagagggagcatgtgagcaagcgagtgtgggaaccag i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34576213 141 + 59248254 tggcgtggtggtgacatgggatttgttcccttgaccttgacccccttcatgagcaggaactggagtggctcattttgctcagcctgccgctggccactccttgcaagagggagtgtgcgagcaagcgagtgtcggaacccg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4447182 141 - 13342542 tggcgtggtggtgacatgggatttgttcccttgaccttgacccccttcatgagcaggaactggagtggctcattttgctcagcctgccgctggccactccttgcaagagggagtgtgcgagcaagcgagtgtcggaaccca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5382576 141 + 7714307 tggcgtggtggtgacatgggatttgttcccttgaccttgacccccttcatgagcgggaactggagtggctcattttgctcagcctgccgctggccactccttgcaagagggagtgtgcgagcaagcgagtgtcggaacccg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29190683 141 + 50890351 tggcgtggtggtaacatgggatttgttaccttgaccttgacccccttcatgggcaggaactggggtgactcattttgctcagcctgccgctggccactccttgcaagagggagtgtgcgagcaagagagtgtcggaacccg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 799550 141 - 2385121 tggcgtggtggtgacatgggatttgttcccttgaccttgacccccttcatgagcgggaactggagtggctcattttgctcagcctgccactggccactccttgcaagagggagcgtgcgagcaagcgagtgtcggaacccg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2250705 141 + 4274983 tggcgtggtggtgacatgggatttgttcccttgaccttgacccccttcgtgggcgggaactggagtggctcattttgctcagcctgccgctggccactccttgcaagagggagtgtgcgagcaagcaagtgtcggaacccg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28479716 141 + 49145316 TGGTGTGGTAGtgagataggatttgttcccttgaccttgaccccattcatgggtgggaactggagtggctcatttccctcagtcggcggctggccactccttgcaagagggagcatgggagcaagcaagtgcgggaacgag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5323251 140 + 8899380 TGGTGTGGTAGtgacatgggatttgttcccttgatcttgatccccttca-gggtaggaactggagtggctcatttccctcagtctgccgctggccactccttgcaagagggagcgtgggagcaagcaagtgcgggactcag i saiBol1.JH378197 C 0 I 2349 s cebCap1.NW_016107633v1 1538057 141 - 2680843 tggtgtggtagtgagatgggatttgttcccttgaccttgaccccattcatgggtgggaactagagtggctcatttccctcagtctgccactggccactccttgcaaaagggagcgtgggagcaagcaagtacgggaacgag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 288301 141 - 4471408 TGGTGTGGTAGtgagatgggatttgttcccttgaccttgacccccttcatgggtgggaactggagtggctcatttccctcagtctgccgctggccactccttgcaagagggaacgtgggagcaagcaagtgcgggaacgag i aotNan1.NW_018505377v1 C 0 C 0 e canFam3.chr1 4549786 2753 - 122678785 I e rheMac8.chr19 30128006 4070 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=44694.000000 s hg38.chr19_GL383574v1_alt 1491 6 + 155864 agggaa s panTro5.chr19 36060320 6 + 61309027 agggaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39812509 6 + 64411610 agggaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6230058 6 - 8369475 agggaa i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34576354 6 + 59248254 agggaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4447323 6 - 13342542 agggaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5382717 6 + 7714307 agggaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29190824 6 + 50890351 agggaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 799691 6 - 2385121 agggaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2250846 6 + 4274983 agggaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28479857 6 + 49145316 agggaa i calJac3.chr22 C 0 I 2303 s cebCap1.NW_016107633v1 1538198 6 - 2680843 agggaa i cebCap1.NW_016107633v1 C 0 I 2992 s aotNan1.NW_018505377v1 288442 6 - 4471408 agggaa i aotNan1.NW_018505377v1 C 0 I 2052 e canFam3.chr1 4549786 2753 - 122678785 I e saiBol1.JH378197 5323391 2349 + 8899380 I e rheMac8.chr19 30128006 4070 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=996192.000000 s hg38.chr19_GL383574v1_alt 1497 260 + 155864 caaacgctagaaccaagttctggcgggagcaggctctgtatgggcctcacagcagcatccaagcccctgcccttttcgcacccaggttcttgtccggcatccaggaaggatcaggttgcatgaacggattgaagggtagcatatgtggggtatcttactgggtgatggaagtggctctcagagggatgggaattggaaaggggatg---gtgcgggaagaaggtgatcttcccctgaagccacaccatctgaagttagctgtg s panTro5.chr19 36060326 263 + 61309027 caaacgctagaaggaagttctggtgggagcaggctctgtatgggcctcacagcagcatccaagcccctgccctttacgcacccaggttcttgtccggcatccaggaaggatcaggttgcatgaacggattgaagggtagcatatgtggggtatcttactgggtgatggaagtggctctcagagggatgggaattggaaaggggatgatggtgcgggaagaagatgatcttgccctgaagccacaccatctgaagttagctgtg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39812515 263 + 64411610 caaacgctagaacgaagttctggtgggagcaggctctgtatgggcctcacagcagcatccaagcccctgccctttacgcacccaggttcttgtccggcatccaggaaggatcaggttgcatgaacggattgaagggtagcatatgtggggtatcttactgggtgatggaagtggctctcagagggatgggaattggaaaggggatgatggtgcgggaagaaggtgatcttcccctgaagccacaccatctgaagttagctgtg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6230064 259 - 8369475 caaacgctagaaccaagttctggcgggagcaggctctgtatgggcctcacagcagcatccaag-ccctgcccttttcgcacccaggttcttgtccggcatccaggaaggatcaggttgcatgaacggattgaagggtagcgtatgtggggtatcttactgggtgatggaagtggctctcagagggatgggaattggaaaggggatg---gtgcgggaagaaggtgatcttcccctgaagccacgccatctgaagttagctgtg i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34576360 260 + 59248254 tgaacgctagaaccaggttctggagggagcaggctctgtatggtcctcacagcagcatccaagcccccgccctcttcgcacccaagttcttgtctggcacccaggaagaatcaggttgcatggtcagattgaagggtagcatatgtggaggattttactgggtgatggaagtggctgtcagcgggatgggaattggaaaggggatg---gtgtgggaagaaggtgttcttcccctgaagccacaccatctgaagttagccgtg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4447329 260 - 13342542 tgaacgctagaaccaggttctggagggagcaggctctgtatggtcctcacagcagcatccaagcccccgccctcttcgcacccaagttcttgtctggcacccaggaagaatcaggttgcatggtcagattgaagggtagcatatgtggaggattttactgggtgatggaagtggctgtcagcgggatgggaattggaaaggggatg---gtgtgggaagaaggtgttcttcccctgaagccacaccatctgaagttagccgtg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5382723 260 + 7714307 tgaacgctagaaccaggttctggaggcagcaggctctgtatggtcctcacagcagcatccaagcccccgccctcttcgcacccaagttcttgtctggcacccaggaaaaatcaggttgcatggtcagattgaagggtagcatatgtggaggattttactgggtgatggaagtggctgtcagtgggatgggaattggaaaggggatg---gtgtgggaagaaggtgttcttcccctgaagccacaccatctgaagttagctgtg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29190830 260 + 50890351 cgaacgctagaaccaggttctggagggagcaggctctgtatggtcctcacagcagcatccaagtccccgccctcttcgtacccaggttcttgtctggcacccaggaagaatcaggttgcatggtcagattgaagggtagcatatgtggaggattttactgggtgatggaagtggctgtcagcgggatgggaactggaaaggggatg---gtgtgggaagaaggtgttcttcccctgaagccacaccatctgaagttagccgtg i chlSab2.chr6 C 0 I 1850 s manLeu1.NW_012102454v1 799697 260 - 2385121 tgaacgctagaaccaggttctggagggagcaggctctgtatggtcctcacagcagcatccaagcccccgccctcttcgcacccaagttcttgtctggcacccaggaagaatcaggttgcatggtcagattgaaaggtagcatatgtggaggattttactgggtgatggaagtggctgtcagcgggatgggaattggaaaggggatg---gtgtgggaagaaggtgttcttcccctgaagccacaccatctgaagttagccgtg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2250852 260 + 4274983 cgaatgctagaaccaggttctggtgggagcaggctctgtatggtcctcacagcagcatccaagcccccgccctcttcgcacccaggttcttgtctggcacccaggaagaagcaggttgcatggtcagattgaagggtagcatatgtggaggattttactgtgtgatggaagtggctgtcagcgggatgggaattggaaaggggatg---atgtgggaagaaggtgttcttcccctgaagccatgccatctgaagttagccgtg i colAng1.NW_012111697v1 C 0 C 0 e canFam3.chr1 4549786 2753 - 122678785 I e aotNan1.NW_018505377v1 288448 2052 - 4471408 I e cebCap1.NW_016107633v1 1538204 2992 - 2680843 I e saiBol1.JH378197 5323391 2349 + 8899380 I e calJac3.chr22 28479863 2303 + 49145316 I e rheMac8.chr19 30128006 4070 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=5900.000000 s hg38.chr19_GL383574v1_alt 1757 2 + 155864 tc s panTro5.chr19 36060589 2 + 61309027 tc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39812778 2 + 64411610 cc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6230323 2 - 8369475 tc i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34576620 2 + 59248254 tc i macFas5.chr19 C 0 I 6609 s macNem1.NW_012011689v1 4447589 2 - 13342542 tc i macNem1.NW_012011689v1 C 0 I 3691 s cerAty1.NW_012005268v1 5382983 2 + 7714307 tc i cerAty1.NW_012005268v1 C 0 I 1905 s manLeu1.NW_012102454v1 799957 2 - 2385121 tc i manLeu1.NW_012102454v1 C 0 I 1882 s colAng1.NW_012111697v1 2251112 2 + 4274983 tc i colAng1.NW_012111697v1 C 0 I 1234 e chlSab2.chr6 29191090 1850 + 50890351 I e canFam3.chr1 4549786 2753 - 122678785 I e aotNan1.NW_018505377v1 288448 2052 - 4471408 I e cebCap1.NW_016107633v1 1538204 2992 - 2680843 I e saiBol1.JH378197 5323391 2349 + 8899380 I e calJac3.chr22 28479863 2303 + 49145316 I e rheMac8.chr19 30128006 4070 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=29388.000000 s hg38.chr19_GL383574v1_alt 1759 52 + 155864 tTgcagagatccagccactgcactccagcctgggcaacagagcgagtctccg s panTro5.chr19 36060591 52 + 61309027 tTgcagagatccggccactgcactccagcctgggcaacagagcgagtctccg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39812780 52 + 64411610 tTgcagagatccggccactgcactccagcctgggcaacagagcgagtctccg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6230325 52 - 8369475 tTgcagagatccggccactgcactccagcctgggcaacagagcgagtctctg i gorGor5.CYUI01015150v1 C 0 C 0 e chlSab2.chr6 29191090 1850 + 50890351 I e canFam3.chr1 4549786 2753 - 122678785 I e aotNan1.NW_018505377v1 288448 2052 - 4471408 I e cebCap1.NW_016107633v1 1538204 2992 - 2680843 I e saiBol1.JH378197 5323391 2349 + 8899380 I e calJac3.chr22 28479863 2303 + 49145316 I e colAng1.NW_012111697v1 2251114 1234 + 4274983 I e manLeu1.NW_012102454v1 799959 1882 - 2385121 I e cerAty1.NW_012005268v1 5382985 1905 + 7714307 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e macFas5.chr19 34576622 6609 + 59248254 I e rheMac8.chr19 30128006 4070 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=6584.000000 s hg38.chr19_GL383574v1_alt 1811 22 + 155864 tctcaaaaaaaa-taaaataaaa s panTro5.chr19 36060643 23 + 61309027 tctcaaaaaaaaataaaataaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39812832 22 + 64411610 tctcaaaaaaaa-ataaataaga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6230377 15 - 8369475 tctcaaaaaaaa--------aaa i gorGor5.CYUI01015150v1 C 0 C 0 s canFam3.chr1 4552539 20 - 122678785 TTTCAATAGAAA-TTAAGAAA-- i canFam3.chr1 I 2753 C 0 e chlSab2.chr6 29191090 1850 + 50890351 I e aotNan1.NW_018505377v1 288448 2052 - 4471408 I e cebCap1.NW_016107633v1 1538204 2992 - 2680843 I e saiBol1.JH378197 5323391 2349 + 8899380 I e calJac3.chr22 28479863 2303 + 49145316 I e colAng1.NW_012111697v1 2251114 1234 + 4274983 I e manLeu1.NW_012102454v1 799959 1882 - 2385121 I e cerAty1.NW_012005268v1 5382985 1905 + 7714307 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e macFas5.chr19 34576622 6609 + 59248254 I e rheMac8.chr19 30128006 4070 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=4266.000000 s hg38.chr19_GL383574v1_alt 1833 5 + 155864 taaaT s panTro5.chr19 36060666 5 + 61309027 taaaT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39812854 5 + 64411610 taaaT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6230392 5 - 8369475 aaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s calJac3.chr22 28482166 5 + 49145316 TAAGA i calJac3.chr22 I 2303 C 0 s saiBol1.JH378197 5325740 5 + 8899380 TAAGA i saiBol1.JH378197 I 2349 C 0 s canFam3.chr1 4552559 5 - 122678785 TAAGA i canFam3.chr1 C 0 C 0 e chlSab2.chr6 29191090 1850 + 50890351 I e aotNan1.NW_018505377v1 288448 2052 - 4471408 I e cebCap1.NW_016107633v1 1538204 2992 - 2680843 I e colAng1.NW_012111697v1 2251114 1234 + 4274983 I e manLeu1.NW_012102454v1 799959 1882 - 2385121 I e cerAty1.NW_012005268v1 5382985 1905 + 7714307 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e macFas5.chr19 34576622 6609 + 59248254 I e rheMac8.chr19 30128006 4070 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=142794.000000 s hg38.chr19_GL383574v1_alt 1838 33 + 155864 AATTTCAACAGAATTATTAAAGATGTTAAATAg s panTro5.chr19 36060671 33 + 61309027 AATTTCAACAGAATTATTAAAGATGTTAAATAg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39812859 33 + 64411610 AATTTCAACAGAATTATTAAAGATGTTAAATAg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6230397 33 - 8369475 aTTTTCAACAGAATGATTAAAGATGTTAAATAg i gorGor5.CYUI01015150v1 C 0 C 0 s cerAty1.NW_012005268v1 5384890 33 + 7714307 aatttcaacaaaattactaaagatgttaagtag i cerAty1.NW_012005268v1 I 1905 C 0 s chlSab2.chr6 29192940 33 + 50890351 aatttcaacaaaattactaaagatgttaagtag i chlSab2.chr6 I 1850 C 0 s manLeu1.NW_012102454v1 801841 33 - 2385121 aatttcaacaaaattactaaagatgttaagtag i manLeu1.NW_012102454v1 I 1882 C 0 s calJac3.chr22 28482171 33 + 49145316 ACTTTCAACAGAATTATTAAAGATATTAAGTAg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5325745 33 + 8899380 AATTTCAACAGAATTATTAAAGATATTAAGTAg i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 290500 33 - 4471408 AATTTCAACAGAATTATTAAAGATGTTAAGTAg i aotNan1.NW_018505377v1 I 2052 C 0 s canFam3.chr1 4552564 33 - 122678785 AATTTCAGCAGACTTATTGAAGATATAAAATAG i canFam3.chr1 C 0 I 134 e cebCap1.NW_016107633v1 1538204 2992 - 2680843 I e colAng1.NW_012111697v1 2251114 1234 + 4274983 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e macFas5.chr19 34576622 6609 + 59248254 I e rheMac8.chr19 30128006 4070 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=904707.000000 s hg38.chr19_GL383574v1_alt 1871 295 + 155864 ccaggtgcagcgattcatgccagtaatcccagcactttggaaggctgagacagcaggattatttgaggtcaggagttcaagaccaacacagaaagaccctgtctctaac--aacaacaaaaaaaaa---tttagccaggc---tcatgttggtgtgtacttgtagccccagctactctgaaggctgaggcaggaggatcacttgagatcagaatttgaggccacagtgagttatgactgcactactgtactccagctcaggtgatagacagcaagaccctgtcattaaatt---------------------------------------------------------aaaaaaaa--------aaaa s panTro5.chr19 36060704 295 + 61309027 ccaggtgcagtgattcatgccagtaatcccagcactttggaaggctgagacagcaggattatttgaggtcaggagttcaagaccaacacagaaagaccctgtctctacc--aaaaaaaaaaaaaaa--atttagccaggc---tcgtgttggtgtgtacttgtagccccagctactctgaaggctgaggcaggaggatcacttgagatcagaatttgaggccacagtgagttatgattgcactactgtactccagctcaggtgatagacagcaagaccctgtcattaaaa----------------------------------------------------------aaaaaaaa--------aaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39812892 290 + 64411610 ccaggtgcagtgattcatgccagtaatcccagcactttggaaggctgagacagcaggattatttgaggtcaggagttcaagaccaacacagaaagaccctgtctctacc--aaaaaaaaaaaaa-----tttagccaggc---tcgtgttggtgtgtacttgtagccccagctactctgaaggctgaggcaggaggatcacttgagatcagaatttgaggccacagtgagttatgattgcactactgtactccagctcaggtgatagacagcaagaccctgtcattaa------------------------------------------------------------aaaaaaaa--------aaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6230430 301 - 8369475 ccaggtgcagtgattcatgccagtaatcccagcactttggaaggctgagacagcaggattatttgaggtcaggagttcaagaccaacatagaaagaccctgtctctacc--aaaaaaaaaaaaaaaaaatttagccaggc---tcgtgttggtgtgtacttgtagccccagctactctgaaggctgaggcaggaggatcacttgagatcagaatttgaggccacagtgagttatgattgcactactgtactccagctcaggtgacagacagcaagaccctgtcattaaatt---------------------------------------------------t---aaaaaaataa--------aaaa i gorGor5.CYUI01015150v1 C 0 C 0 s cerAty1.NW_012005268v1 5384923 299 + 7714307 ccaggtgcagtggttcatgcctgtaacaccagcactttggaaggctgagacagcaggattatttgaggtcaggagctcaggaccaacacaaaaagatcccgcctctacc--aaaaaaaaga---------ttagccaggctcatcatgttggtgtgtgcctgtagccccggctactctggaggctgaggcaggaggctcacttgagatcagaacttgaggctatagtgagctatgattgcaccactgcactccagctcaggtgacaaagaataagaccctgtcattaaact---------------------------------------------------ttaaaaaaaagaaaa-------gaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29192973 306 + 50890351 ccaggggcagtggttcatgcctgtaacaccagcactttggaaggctgagacagcaggattatttgaggtcagaagctcaggaccaacacaaaaagatcccgtctctacc--aaaaaaaaga---------ttagccaggctcatcatgttggtgtgtgcctgtagccccggctactctggaggctgaggcgggaggctcacttgagatcagaacttaaggctatagtgagctatgattgcaccactgcactccagctcagatgacagagagcaagaccctgtcattaaatt---------------------------------------------------taaaaaaagagaaaaaagggggaaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 801874 298 - 2385121 ccaggtgcagtggttcatgcctgtaacaccagcactttggaaggctgagacagcaggattatttgaggtcaggagctcaggaccaacacaaaaagatcccgtctctgcc--aaaaaaaaga---------ttagccaggctcatcatgttggtgtgtgcctgtagccccggctactctggaggctgaggcgggaggctcacttgagattagaacttgaggctatagtgagctatgattgcaccactgcactccagctcaggtgacaaagaacaagaccctgtcattaaact---------------------------------------------------ttaaaaaaaagaaa--------agaa i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28482204 331 + 49145316 ccaggtgcagtagttcatgcctgtaatcctagcactttggaaggctgaggcagcaagattatttgaggtcaggagttcatgaccaacatagcaacaccccatctcttcc--aaaaaaaaaa---------ttagccaggc---ttgtggtggtatgtgcctgtagtcccagctactctggaggttgaggcaggaggatcacttgagaccagaatttgaggttacagtgagctatgactgcaccactacactctctctctggtgacagaaggcaagaccctgtcattaaatt----------taaaaaaaaaTCTGACAGGTGCTTCTCAGGTTAAATAATTTTTAaaaaagaaaa------------- i calJac3.chr22 C 0 I 14 s saiBol1.JH378197 5325778 337 + 8899380 ccaggtgcagtagttcatgcctgtaatcctagcactttggaaggctgaggaagcaagattatttgaggtcaggagttcaagaccaacataacaaca-cccatctctacccaaaaaaaaaaa---------ttagccaggt---ttgtggtggtatgtgcctgtagtcccagctactctggaggctgaggcaggaggatcacttgagaccagaaattgaggttacagtgagctatgattgcaccactaca--ctctctctagtaacagagggcaagaccctgtcattaaattaaaaaaaaaaaaaaaaaaaaTCTGACAGGTGCTTCTCAGGTTAAATAA---TTaaaaaaaaaaa------------- i saiBol1.JH378197 C 0 I 14 s aotNan1.NW_018505377v1 290533 289 - 4471408 ccaggtgtagtagtttatgcctgtaatcctagcactttggaaggcggaggcagcaagattatttgaggtcaagagttcaagaacaatatagcaacaccccatctctacc--aaaaaaaaaa---------ttagccaggc---ttgtggtggtatgtgcctgtagtcccagctactctggaagctgaggcaggaggaccacttgtgaccagaatttgaggttacagtgagctatgatcacatcactacactctctctctagtgacagagggcaagaccctgtcattaaat----------------------------------------------------ttaaaaaaaaaaa------------- i aotNan1.NW_018505377v1 C 0 I 109 e canFam3.chr1 4552597 134 - 122678785 I e cebCap1.NW_016107633v1 1538204 2992 - 2680843 I e colAng1.NW_012111697v1 2251114 1234 + 4274983 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e macFas5.chr19 34576622 6609 + 59248254 I e rheMac8.chr19 30128006 4070 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=6552.000000 s hg38.chr19_GL383574v1_alt 2166 2 + 155864 aa s panTro5.chr19 36060999 2 + 61309027 aa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39813182 2 + 64411610 aa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6230731 2 - 8369475 aa i gorGor5.CYUI01015150v1 C 0 C 0 s cerAty1.NW_012005268v1 5385222 2 + 7714307 aa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29193279 2 + 50890351 aa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 802172 2 - 2385121 aa i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28482549 2 + 49145316 aa i calJac3.chr22 I 14 I 38 s saiBol1.JH378197 5326129 2 + 8899380 aa i saiBol1.JH378197 I 14 I 54 e canFam3.chr1 4552597 134 - 122678785 I e aotNan1.NW_018505377v1 290822 109 - 4471408 I e cebCap1.NW_016107633v1 1538204 2992 - 2680843 I e colAng1.NW_012111697v1 2251114 1234 + 4274983 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e macFas5.chr19 34576622 6609 + 59248254 I e rheMac8.chr19 30128006 4070 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=31287.000000 s hg38.chr19_GL383574v1_alt 2168 9 + 155864 aaaGatgta s panTro5.chr19 36061001 9 + 61309027 aaaGatgta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39813184 9 + 64411610 aaaGatgta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6230733 9 - 8369475 aaaGatgta i gorGor5.CYUI01015150v1 C 0 C 0 s cerAty1.NW_012005268v1 5385224 9 + 7714307 aaagatgta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29193281 9 + 50890351 aaagatgta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 802174 9 - 2385121 aaagatgta i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28482589 9 + 49145316 aaaaatCTA i calJac3.chr22 I 38 C 0 s saiBol1.JH378197 5326185 9 + 8899380 aaaaatCTA i saiBol1.JH378197 I 54 C 0 s cebCap1.NW_016107633v1 1541196 9 - 2680843 aaaaatgta i cebCap1.NW_016107633v1 I 2992 C 0 e canFam3.chr1 4552597 134 - 122678785 I e aotNan1.NW_018505377v1 290822 109 - 4471408 I e colAng1.NW_012111697v1 2251114 1234 + 4274983 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e macFas5.chr19 34576622 6609 + 59248254 I e rheMac8.chr19 30128006 4070 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=1691251.000000 s hg38.chr19_GL383574v1_alt 2177 421 + 155864 aagtagagggtggacccaaaggacaaatactgtaggaccaataccacttatatgaggttcccagaggggtcagattcacagccacagtaggcaagatggtggtttccaggggctggggg-aaaggggaatgaagagttattgtttaaattggtactgaattttatttgTGTGTTTGTGGCTTTGTTttttgtttttgctttgtttttgttttgttttgttttgttttgagatagagtctt----tgtcacccaggctggagtgc-ggtggcatcatcttggctcactgcaacctctgcct------cccagattcaagtgattcttgtgccttggctgccccagtagctgggattacaggtgtgcaccatcgtgccaggctaatttttgtatttttagtagagacagcatttcaccatgttgcccagactgat s panTro5.chr19 36061010 421 + 61309027 aagtagagggtggacccaaaggacaaatactgtaggaccaataccacttatatgaggttcccagaggggtcagattcacagccacagtaggcaagatggtggttgccaggggctggggg-aaaggggaatgaagagttattgtttaaattggtacagaattttatttgTGTGTTTGTGGCTTTGTTttttgtttttgctttgtttttgttttgttttgttttgttttgagatagagtctt----tgtcacccaggctggagtgc-ggtggcatcatcttggctcactgcaacctctgcct------cccagattcaagtgattcttgtgccttggctgccccagtagctgggattacaggtgtgcaccaccgtgccaggctaatttttgtatttttagtagagacagcatttcaccatgttgcccagactgat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39813193 421 + 64411610 aagtagagggtggacccaaaggacaaatactgtaggaccaataccacttatatgaggttcccagaggggtcagattcacagccacagtaggcaagacggtggttgccaggggctggggg-aaaggggaatgaagagttattgtttaaattggtacagaattttatttgTGTGTTTGTGGCTTTGTTttttgtttttgctttgtttttgttttgttttgttttgttttgAGATAGAGTctt----tgtcacccaggctggagtgc-ggtggcatcatcttggctcactgcaacctctgcct------cccagattcaagtgattcttgtgccttggctgccccagtagctgggattacaggtgtgcaccaccgtgccaggctaatttttgtatttttagtagagacagcatttcaccatgttgcccagactgat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6230742 418 - 8369475 aagtagagggtggaccgaaaggacaaatactgtaggaccaataccacttatatgaggttcccaga-gggtcagattcacagccacagtaggcaagatggtggttgccaggggctggggg-aaa-gggaatgaagagttattgtttaaattggtacagaattttatttgTGTGTTTGTGGCTTTGTTttttgtttttgctttgt-----ttttgttttgttttgttttgagatagagtctttctctgtcacccaggctggagtgt-ggcggcatcatcttggctcactgcaacctctgcct------cccagattcaagtgattcttgtgccttggctgccccagtagctgggattacaggtgtgcaccaccgtaccaagctaatttttgtatttttagtagagacagcatttcaccatgttgcccagactgat i gorGor5.CYUI01015150v1 C 0 C 0 s cerAty1.NW_012005268v1 5385233 421 + 7714307 aagtagagggtagacccaaaggacaaatactgtaggaccaataccacttatatgaggttcccagaggggtcagattcacaaccgcagtcggcaaaatggtggttgccaggggctgggag-aaaggggaataaagagttcctgtttaaatgggtacataattttatttgTGTGTTTGTGGCTTTGTtttttgtttttgctttgt----------ttttgttttgttttcagacagagtctttctctgtcacccaggctggagtgc-ggtggcatcatcttggctcactgcaacctccacttgccgggtcctggttcaagcaattctcctccctcagcctcccgaatagctgagattacagacatgcaccaccgtgccgggctaatttttgtatttttagtagagacagggtttcaccatgttgcccaggctgat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29193290 415 + 50890351 aagtagagggtggacccaaaggacaaatactacaggaccaataccacttatatgaggttcccagaggggtcagattcacaaccacagtaggcaaaatggtggttgccaggggctgggag-aaaggggaataaagagttcttgtttaaatgggtacataattttatttgTGTGTTTGTGGCTTTGTTTTTTGTTATTGCtttgt----------ttttgttttgttttcagacagagtctttctctgtcacccaggctggagtgc-ggtggcatcatcttggctcactgcaacctctgcct------cccagattcaagtgattcttgtgcctcagctgcccgggtagctgggattacaggtgtgcaccaccgtgccgggctaatttttgtatttttagtagagacagggtttcaccatgttgcccaggctgat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 802183 415 - 2385121 aagtagagggtggacccaaaggacaaatactataggaccaataccacttatatgaggttcccagaggggtcagattcataaccacagtaggcaaaatggtggttgccaggggctgggag-aaaggggaataaagagttcctgtttaaatgggtacataattttatttgtgtgtttgtggctttgttttttgtttttgctttgt----------ttttgttttgttttcagacagagtctttctctgtcacccaggctggagtgc-ggtggcatcatcttcgctcactgcaacctctgcct------cccagattcaagtaattcttgtgcctcagctgcctgagtagctgggattacagacgtgcaccaccgtgccgggctaatttttgtatttttagtagagacagggtttcaccatgttgcccaggctgat i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28482598 404 + 49145316 AAGTagagggtagacccaaaagacaaatagtgtagg----attccacttacatgaggttcccagagtggtcagattcgtagcgacagaaggtaaaatggtggttgccaggggctggggggacaaggaaatgaagagttattgtttaattgtgtacagaattttatt----agtttgtgg---tg-tttttgtttttgctttat----------ttttgttttgcttcgagaccaagtctttctctgtcacccaggctggagtgctggtggcaccatcttggctcactgcaacctctgcct------tccagattcaagcgattcttgtggctcagccaccctagtagctgggattgcaggcatgtgccaccatgccaggctaatttttgtatttttagtagagacacggtttcaccatgttg-ccaggctgat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5326194 403 + 8899380 AAGTagagggtggactcagaagacaaatagtgtagg----attccacttacatgagattcgcagagtggtcagattcatagcgacagaaggtaaaatggtggttgccaggggctaggggtaaaaagaaatgaagagttattgtttaattgtgtacagaattgtatt----tgcTTGTGGTTTTG-Tttttgtttttgctttat----------ttttgttttg-tttgagac--agtctttctctatcacccaggttggagtgc-agtggcaccatcttggctcactgcaacctctgtct------cccagattcaagcgattcttgtgcctcggccaccctagtagctgggattgcaggcatgtgccaccatgccaggctaatttctgtatttttagtagagacagagtttcaccatgttg-ccaggctgat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1541205 401 - 2680843 aagtagagggtggacccaaaagacaaatagtgcaga----attccacttacatgaggttcccagagtggccagattcatagcaacagaaggtaaaatggtggttgccaggggctggggggaaaaggaaatgaagagttattgtttaattgtgtacagaatttT--------GTTCGTGGTTTTG-Tttttg-ttttgctttat----------ttttgttttgttttgagacagagtctttctctgtcacccaggctggagtgc-agtggcaccatcttggctcactgcaacctctgcct------cccagattcaagcgattcttgtgcctcggccaccctagtagctggaattgcaggcgtgtgccaccatgccaggctattttttgtatttttagtagagacagagtttcaccatgttc-ccaggctgat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 290931 406 - 4471408 aagtagagggtggacccaaaagacaaatagtatagg----attccacttacatgaggttcccagagtggtcagattcatagcgacagaaggtaaaatgctggttgccaggggctggggggaaaaggaaatgaagagttattatttaattgtgtacagaattttatt----tGTTTGTGGTTTTG-tttttgtttttgctttat----------ttttgtttcgttttgagacagagtctttctctatcacccaggctggagtgc-agtggcaccatcttggctcactgcaacctctgcct------cccagattcaagtgattcttctgccttggccaccctagtagctgggattgtaggtgtgtgccaccatgccaggctactttttgtatttttagtagagacagggtttcaccatgttg-ctaggctgat i aotNan1.NW_018505377v1 I 109 C 0 e canFam3.chr1 4552597 134 - 122678785 I e colAng1.NW_012111697v1 2251114 1234 + 4274983 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e macFas5.chr19 34576622 6609 + 59248254 I e rheMac8.chr19 30128006 4070 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=336056.000000 s hg38.chr19_GL383574v1_alt 2598 64 + 155864 ctcgaactcctgagctcaagcgatccac--ccgcctcagcctcccaaagtgctggCCGTGCCTGAC s panTro5.chr19 36061431 64 + 61309027 ctcgaactcctgagctcaagcgatccac--ccgcctcagcctcccaaagtgctggCCGTGCCTGAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39813614 64 + 64411610 ctcgaactcctgagctcaagcgatccac--ccgcctcagcctcccaaagtgctggCCGTGCCTGAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231160 63 - 8369475 ctcgaactcctgagctcaagcgatccac--ccgcctcagcct-ccaaagtgctggCCGTGCCTGAC i gorGor5.CYUI01015150v1 C 0 C 0 s cerAty1.NW_012005268v1 5385654 64 + 7714307 ctcgaactcctgagctcaagtgattcac--ctgcctcagcctcccaaagtgctggCTGTGCCTGGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29193705 64 + 50890351 ctcgaactcctgagctcaagtgattcac--ctgcctcagcctcccaaagtgctggCCGCGCCTGGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 802598 64 - 2385121 ctcgaactcctgagctcaagtgattcac--ctgcctcagcctcccaaagtgctggctgtgcctggc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2252348 64 + 4274983 ctcgaacccctgagctcaagtgattcac--ctgcctcagcctcccaaagtgctggCCATGCCTGGC i colAng1.NW_012111697v1 I 1234 C 0 s calJac3.chr22 28483002 64 + 49145316 ctcgaattcctgagctcaaggaatccat--ctgcctcaacctctcaaagtgctggccatgtctggc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5326597 64 + 8899380 ctcgaattcctgagctcaaggtatccat--ctgcctcaacctctcaaagtgctggCCGTGTCTGGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1541606 66 - 2680843 ctcgaattcctgagctcaaggtatccatccccgcctcaacctctcaaagtgctggCCGTGTCTGGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 291337 64 - 4471408 ctcgaattcttgagctcaaggtatccat--ccgccttaacctctcaaagtgctggCCATGTCTGGC i aotNan1.NW_018505377v1 C 0 C 0 e canFam3.chr1 4552597 134 - 122678785 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e macFas5.chr19 34576622 6609 + 59248254 I e rheMac8.chr19 30128006 4070 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=123840.000000 s hg38.chr19_GL383574v1_alt 2662 24 + 155864 tggggatagaattttagtttgggg s panTro5.chr19 36061495 24 + 61309027 tggggatagaattttagtttgggg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39813678 24 + 64411610 tggggatagaattttagtttgggg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231223 24 - 8369475 tggggatagaattttagtttgggg i gorGor5.CYUI01015150v1 C 0 C 0 s cerAty1.NW_012005268v1 5385718 24 + 7714307 tggggatagaattttagtttgggg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29193769 24 + 50890351 tggggatagaattttagtttgggg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 802662 24 - 2385121 tggggatagaattttagtttgggg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2252412 24 + 4274983 tggggatagaattttagtttgggg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28483066 5 + 49145316 tgggt------------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5326661 24 + 8899380 tgggtatagaattttagtttgggg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1541672 24 - 2680843 tgggtatagaattttagtttggag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 291401 24 - 4471408 tgggtatagaattttagtttgggg i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4552731 24 - 122678785 taggtaaagagtttcagtttgagt i canFam3.chr1 I 134 C 0 e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e macFas5.chr19 34576622 6609 + 59248254 I e rheMac8.chr19 30128006 4070 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=19015.000000 s hg38.chr19_GL383574v1_alt 2686 4 + 155864 agat s panTro5.chr19 36061519 4 + 61309027 agat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39813702 4 + 64411610 agat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231247 4 - 8369475 agat i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34583231 3 + 59248254 aaa- i macFas5.chr19 I 6609 C 0 s cerAty1.NW_012005268v1 5385742 4 + 7714307 agat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29193793 4 + 50890351 agat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 802686 4 - 2385121 agag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2252436 4 + 4274983 agat i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5326685 4 + 8899380 agat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1541696 4 - 2680843 agat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 291425 4 - 4471408 agat i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4552755 4 - 122678785 agat i canFam3.chr1 C 0 C 0 e calJac3.chr22 28483071 0 + 49145316 C e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e rheMac8.chr19 30128006 4070 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=1634021.000000 s hg38.chr19_GL383574v1_alt 2690 211 + 155864 agaaaagttctggagacagatggtagtcatggttgcacaataatgtgaatgtatttaatgccactgaactgtacacagagaagtggttaaaatggtgatgtttatgtt--atgtgtattttatcataCGC-ACACAAAAATAAAGGGTAGCAGTAATGGACGAAGTGAAGCAGAGGCTGACGGGGACTGGAATGGCCATGGAGGGGAGGTGGAG s panTro5.chr19 36061523 211 + 61309027 agaaaagttctggagacagatggtagtcatggttgcacaataatgtgaatgtatttaatgccactgaactgtacacagagaagtggttaaaatggtgatgtttatgtt--atgtgtattttatcataCAC-ACACAAAAATAAAGGGTAACAGTAATGGACGAAGTGAAGCAGAGGCTGACAGGGACTGGAATGGCCATGGAGGGGAGGTGGAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39813706 211 + 64411610 agaaaagttctggagacagatggtagtcacggttgcacaataatgtgaatgtatttaatgccactgaactgtacacagagaagtggttaaaatggtgatgtttatgtt--atgtgtattttatcataCAC-ACACAAAAATAAAGGGTAACAGTAATGGACGAAGTGAAGCAGAGGCTGACAGGGACTGGAATGGCCATGGAGGGGAGGTGGAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231251 211 - 8369475 agaaaagttctggagacagatggtagtcatggttgcacaataatgtgaatgtattcaatgccactgaactgtacacagagaagtggttaaaatggtgatgtttatgtt--atgtgtattttatcataCGC-ACACAAAAATAAAGGGTAGCAGTAACGGACGAAGTGAAGCAGAGGCTGACAGGGACTGGAATGGCCATGGAGGGGAGGTGGAG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30132076 211 + 53671032 agaaaagttctggagacagagggtagtcatggttgtacaataacgtgaatgtatttaacgccattgaactgtacacagagaagtggttaaaatggtgatgtttacgtt--atgtgcatttcatcacaCGC-TCACAAAAATAAAGGGTAGCAGTAATGGACGAAGCGAAGCAGAGGCTGACAGGGACTGGAATGGCCACGGAGGGGAGGTGGAG i rheMac8.chr19 I 4070 C 0 s macFas5.chr19 34583234 211 + 59248254 aaaaaagttctggagacagagggtagtcatggttgtacaataacgtgaatgtatttaatgccatcgaactgtacacagagaagtggttaaaatggtgatgtttatgtt--atgtgtatttcatcacaCGC-TCACAAAAATAAAGGGTAGCAGTAATGGACGAAGCGAAGCAGAGGCTGACAGGGACTGGAATGGCCACGGAGGGGAGGTGGAG i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5385746 211 + 7714307 agaaaagttctggagacagatggtagtcatggttgcacaataacgtgaatgtatttaatgccatcgaactgtacacagagaagtggttaaaatggtgatgtttatgtt--atgtgtatttcatcataCGC-TCACAAAAATAAAGGGTAGCAGTAATGGACGAAGCGAAGCAGAGGCTGACAGGGACTGGAATGGCCATGGAGGGGACGTGGAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29193797 211 + 50890351 agaaaagttctggagacagacggtagtcatggttgcacaataacgtgaatgtatttaatgccatcaaactgtacacagagaagtggttaaaatggtgatgtttatgtt--atgcgtatttcatcataCGC-TCACAAAAATAAAGGGTAGCAGTAATGGACGAAGCGAAGCAGAGGCTGACAGGGACTGGAATGGCCACGGAGGGGAGGTGGAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 802690 211 - 2385121 agaaaagttctggagacagatggtagtcatggttgcacaataacgtgaatgtatttaatgccatcgaactgtacacagagaagtggttaaaatggtgacgtttatgtt--atgtgtatttcatcataTGC-TCACAAAAATAAAGGGTAGCAGTAATGGACGAAGCGAAGCAGAGGCCGACAGGGACTGGAATGGCCATGGAGGGGACGTGGAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2252440 211 + 4274983 agaaaagttctggagacagacggtagtcaaggttgcaaaataacatgaatgtatttaatgccatcgaactgtacacagagaagtggttaaaatggtgatgtttgtgtt--atgtgtatttcatcataagc-tcacaaaaaTAAAGGGTAGCAGTAATGGACAAAGCAAAGCAGAGGCTGACAGGGACTGGAATGGCCATGGAGGGGAGCTGGAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28483071 173 + 49145316 --------------------------------------aacaatgtgaatgtatctaatgccatagaactgaacactgagaagtggttaaaatgatgacgtttatgtt--atgtgtattttatcataCAC-ACCCAAAAATGAAGGGTAGCAGTAATGGACGGAGTGAAGCAGAGACTGACAAGGACTGGAATGAGCATGGAGGGGAGGTGGAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5326689 211 + 8899380 aaaaaagttctggagaccgactgtagtcacagctgcacaacaatgcgaacatatttaatgccatagaactggacactgagaagtggttaaaatggtgacgtttatgtt--atgtgtattttatcataCAC-ACCCAAAAATAAAGGGTAGCACTAATGGGTGGAGTGAAGCAGAGGCTGACAAGGACTGGAATGAGCATGGAGGGGAGGCGGAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1541700 213 - 2680843 aaaaaagttctggagactgatcgtagtcacggttgcacaacaatgtgaatgtatttaatgccatagaactggacacttagaagtggttaaaatggtgacgttcatgttaaatgtgtattttatcataCAC-ACCCAAAAATAAAGAGTAGCAGTAATGGACGGAGTGAAGCAGAGGCTGATAAGGACTGGAATGAGCATGCAGGGGAGGTAGAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 291429 211 - 4471408 aaaaaagttctggagaccgatcgtagtcatggttgcacaacaatgtgaatgaatttaatgccatagaactggacactgagaagtggttaaaatggtgacgtttatgtt--atgtgtattttatcataCAC-ACCCAAAAATGAAGGGTAGCAGTAATGGACAGAGTGAAGCAGAGGCTGACAAGGACTGGAATGAGCATGGAGGGGAGGTGGAG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4552759 207 - 122678785 ggaaaagttctggaggtggatggtggtgacagttgcacaacactgtgaatgtagttaatgctactgaaccgtatacttaaaaatgatgaaaacgtaaaaatttat-tt--atgtctattttatcCTACATAACATAAAAATAGAGAATGGAGGTAGCTGGTAAAGCCAAGTACAGGAGGCCAAAGACTGGAATGCACAT----GGGAGGTgggg i canFam3.chr1 C 0 I 181 e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=1058281.000000 s hg38.chr19_GL383574v1_alt 2901 147 + 155864 AGGGGAATAGCAGCCAAGCAGGGAGCAACCCATACTTTGGGACCACCAAGTGGCTCATGCCCCATAAATTCCCAGTAGAGCAAAGGGTAGAAGTAAGACATGGAGTGGAATCTTCCTACACCCTGACCCTCACCCATCTCACACAGC s panTro5.chr19 36061734 147 + 61309027 AGGGGAATAGCAGCCAAGCAGGGAGGAACCCATACTTTGGGACCACCAAGTGGCTCATGCCCCATAAATTCCCAGTAGAGCAAAGGGTAGAAGTAAGACATGGAGTGGAATCTTCCTACACCCTGACCCTCACCCATCTCACACAGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39813917 147 + 64411610 AGGGGAATAGCAGCCAAGCAGGGAGCAACCCATACTTTGGGACCACCAAGTGGCTCATGCCCCATAAATTCCCAGTAGAGCAAAGGGTAGAAGTAAGACATGGAGTGGAATCTTCCTACACCCTGACCCTCACCCATCTCACACAGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231462 147 - 8369475 AGGGGAATAGCAGCCAAGCAGGGAGCAACCCATACTTTGGGACCACCAAGTGGCTCATGCCCCATAAATTCCCAGTAGAGCAAAGGGTAGAAGTAAGACACGGAGTGGAATCTTCCTACACCCTGACCCTCACCCATCTCACACAGC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30132287 147 + 53671032 AGGAGAATAGCAGCCAAGCAGGGAGCAACCCATACCTTGAGACCTCCAAGTGGCTCAAGCCCCATAAATTCCCGGTAGAGCAAAGGATAGAAGTAAGACATGGAGTGGAATCTTCCTACACCCTGACCCTCACGCATATGACACAGC i rheMac8.chr19 C 0 I 403 s macFas5.chr19 34583445 147 + 59248254 AGGAGAATAGCAGCCAAGCAGGGAGCAACCCATACCTTGCGACCTCCAAGTGGCTCAAGCCCCATAAATTCCCGGTAGAGCAAAGGATAGAAGTAAGACATGGAGTGGAATCTTCCTACACCCTGACCCTCACGCATATGACACAGC i macFas5.chr19 C 0 I 79 s cerAty1.NW_012005268v1 5385957 147 + 7714307 AGGAGAATAGCAGCCAAGCAGGGAGCAACCCATACCTTGCGACCTCCAAGTGGCTCAAGCCCCATAAATTCCCGGTAGAGCAAAGGATAGAAGTAAGACATGGAGTGGAATCTTCCTACACCCTGACCctcacgcatatgacacagc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29194008 147 + 50890351 AGGAAAATAGCAGCCAAGCAGGGAGCAACCCATACCTTGCGACCTCCAAGTGGCTCAAGCCCCATATATTCCCGGTAGAGCAAAGGATAGAAGTAAGACATGGAGTGGAATCTTCCTACACCCTGACCCTCACGCATATGACACAGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 802901 147 - 2385121 AGGAGAATAGCAGCCAAGCAAGGAGCAACACATACCTTGCGACCTCCAAGTGGCTCAAGCCCCATATATTCCCAGTAGAGCAAAGGATAGAAGTAAGACATGGAGTGGAATCTTCCTACACCCTGACCctcacgcatatgacacagc i manLeu1.NW_012102454v1 C 0 I 5143 s colAng1.NW_012111697v1 2252651 147 + 4274983 AGGAGAATAGCAGCCAAGCAGGGAGCAACCCATACCTTGCTACCTCCAAGTGGCTCAGGCCCCATAAATTCCCGGTAGAGCAAAGGATAGAAGTAAGACATGGAGCGGAATCTTCCTACACCCTGACCCTCACGCATATCACACAGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28483244 147 + 49145316 AGGGCAACAGCAGCCAAGCAGGAAGCAACAAATACCTTGGGACCACCAAGTGGCTCCTGCCCCATAAATTCCCGGTAGAGCAAAGGTTAGAAGTAAGACATGGAACAGAATCTTTCTATTCTCAACCCCTCATACATCTCACATGGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5326900 147 + 8899380 AGGACAATAGCAGTCAAGCAGGAAGCAACAAATACCTTGGGACCACCAAGTGGCTCCTGCCCCATAAATTCCCGGTAGAGCCAAGGGTAGAAGTAAGACATGGAGCAGAATCTTTCTATACCCAACCCCTCACCTGTCTCACACAGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1541913 147 - 2680843 AGGGTAATAGCAGCCAAGCAGGAAGCAACAAATACCTTGGGACCACCAAGTGGCTCCTGCCCCATAAATTTCCGGTAGAGCAAAGGGTAGAAGACAGACATGGAGCAGAATCTTTCTATACCCAACCCCTTACCCGTCTCACACGGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 291640 147 - 4471408 AGGGCAACAGCAGCCAAGCAGGAAGCAACAAATACCTTGGGACCACCAAGTGGCTCCTGCCCCATAAATTCCCGGTAGAGCAAAGGGTAGAAGTAAGACATGGAGCAGAATCTTTCTATACCCAACCCCTCACCCATCTCACACAGC i aotNan1.NW_018505377v1 C 0 C 0 e canFam3.chr1 4552966 181 - 122678785 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=79443.000000 s hg38.chr19_GL383574v1_alt 3048 41 + 155864 AGCCATGTAG--TAGCTTGACATGCACCCGCCCCAGAAAAGTT s panTro5.chr19 36061881 41 + 61309027 AGCCATGTAG--TAGCTTGACATGCACCCACCCCAGAAAAGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814064 41 + 64411610 AGCCATGTAG--TAGCTTGACATGCACCCGCCCCAGAAAAGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231609 41 - 8369475 AGCCATGTAG--TAGCTTGACATGCATCCGCCCCAGAAAAGTT i gorGor5.CYUI01015150v1 C 0 C 0 s calJac3.chr22 28483391 40 + 49145316 AGCCATATGGTATAGCCTGAAATGCACCTGCCCCAGAAAA--- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5327047 40 + 8899380 AGCCATGTGGTATAGCTTGACGTGCACCTGCCCCAGAAAA--- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1542060 40 - 2680843 AGCCATGTGGTATAGCTTGACATGCACCTGCCCCAGAAAA--- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 291787 40 - 4471408 AGCCATGTGGTATAGCTTGACATGCACCTGCCCCAGAAAA--- i aotNan1.NW_018505377v1 C 0 C 0 e chlSab2.chr6 29194155 0 + 50890351 C e canFam3.chr1 4552966 181 - 122678785 I e colAng1.NW_012111697v1 2252798 0 + 4274983 C e manLeu1.NW_012102454v1 803048 5143 - 2385121 I e cerAty1.NW_012005268v1 5386104 0 + 7714307 C e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e macFas5.chr19 34583592 79 + 59248254 I e rheMac8.chr19 30132434 403 + 53671032 I e nomLeu3.chr10 63828397 100 - 106955855 I a score=27706.000000 s hg38.chr19_GL383574v1_alt 3089 9 + 155864 GCAGGGGTT s panTro5.chr19 36061922 9 + 61309027 GCAGGGGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814105 9 + 64411610 GCAGGGGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231650 9 - 8369475 GCAGGGGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828497 9 - 106955855 GCAGGGGTT i nomLeu3.chr10 I 100 C 0 s calJac3.chr22 28483431 9 + 49145316 GCAAGGATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5327087 9 + 8899380 GCAAGGGTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1542100 9 - 2680843 GCAAGGGTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 291827 9 - 4471408 GCAAGGGTT i aotNan1.NW_018505377v1 C 0 C 0 e chlSab2.chr6 29194155 0 + 50890351 C e canFam3.chr1 4552966 181 - 122678785 I e colAng1.NW_012111697v1 2252798 0 + 4274983 C e manLeu1.NW_012102454v1 803048 5143 - 2385121 I e cerAty1.NW_012005268v1 5386104 0 + 7714307 C e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e macFas5.chr19 34583592 79 + 59248254 I e rheMac8.chr19 30132434 403 + 53671032 I a score=23106.000000 s hg38.chr19_GL383574v1_alt 3098 8 + 155864 CTTCTGTT s panTro5.chr19 36061931 8 + 61309027 CTTCTGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814114 8 + 64411610 CTTCTGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231659 8 - 8369475 CTTCTGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828506 8 - 106955855 CTTTTGTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34583671 8 + 59248254 tctctatt i macFas5.chr19 I 79 C 0 s calJac3.chr22 28483440 8 + 49145316 CTTCTGTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5327096 8 + 8899380 CTTCTGTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1542109 8 - 2680843 CTTCCGTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 291836 8 - 4471408 CTTCTGTA i aotNan1.NW_018505377v1 C 0 C 0 e chlSab2.chr6 29194155 0 + 50890351 C e canFam3.chr1 4552966 181 - 122678785 I e colAng1.NW_012111697v1 2252798 0 + 4274983 C e manLeu1.NW_012102454v1 803048 5143 - 2385121 I e cerAty1.NW_012005268v1 5386104 0 + 7714307 C e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e rheMac8.chr19 30132434 403 + 53671032 I a score=34210.000000 s hg38.chr19_GL383574v1_alt 3106 18 + 155864 AAAAAAAAAAAA---------------AGAggc s panTro5.chr19 36061939 15 + 61309027 AAAAAAAAAA------------------GAggc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814122 23 + 64411610 aaaaaaaaaaaa----------aaaagaaaggc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231667 24 - 8369475 aaaaaaaaaaaa---------aaaaaaaGAggc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828514 29 - 106955855 aaaaaaaaaaaaaa----aaaaaaaaaaGAggc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34583679 19 + 59248254 aaaaataacaaa--------------aattggc i macFas5.chr19 C 0 C 0 s calJac3.chr22 28483448 33 + 49145316 AATAAAAGGAAAAATTTAAAAAAATAAAGAGAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5327104 33 + 8899380 AATAAAAAGAAAAATTTTAAAAAATGAAGAggc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1542117 33 - 2680843 AATACAAAGCAAAATTTAAAAAAATAAAGAggc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 291844 33 - 4471408 AATAAAAAGAAAAATTTTTAAAAATAAAGAGGG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4553147 18 - 122678785 aaaaaaaaAAAA---------------AAAGGA i canFam3.chr1 I 181 I 321 e chlSab2.chr6 29194155 0 + 50890351 C e colAng1.NW_012111697v1 2252798 0 + 4274983 C e manLeu1.NW_012102454v1 803048 5143 - 2385121 I e cerAty1.NW_012005268v1 5386104 0 + 7714307 C e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e rheMac8.chr19 30132434 403 + 53671032 I a score=96051.000000 s hg38.chr19_GL383574v1_alt 3124 30 + 155864 tgggt-gcggtggctcacacctgtaatccca s panTro5.chr19 36061954 30 + 61309027 tgggt-gtggtggctcacacctgtaatccca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814145 31 + 64411610 tgggtggtggtggctcacacctgtaatccca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231691 30 - 8369475 cgggt-gcggtggctcacacctgtaatccca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828543 30 - 106955855 tgggt-gtggtggctcacacctgtaatccca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34583698 30 + 59248254 cgggc-gcggtggctcaagcctgtaatccca i macFas5.chr19 C 0 C 0 s calJac3.chr22 28483481 30 + 49145316 TGGAT-AAgatggctcatacctctaatccca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5327137 30 + 8899380 cagat-aagatggctcacatctgtaatccca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1542150 30 - 2680843 cagat-aagatggctcacacctgtaatccca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 291877 30 - 4471408 CAGAT-AAgatggctcacacctgtaatccca i aotNan1.NW_018505377v1 C 0 C 0 e chlSab2.chr6 29194155 0 + 50890351 C e canFam3.chr1 4553165 321 - 122678785 I e colAng1.NW_012111697v1 2252798 0 + 4274983 C e manLeu1.NW_012102454v1 803048 5143 - 2385121 I e cerAty1.NW_012005268v1 5386104 0 + 7714307 C e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e rheMac8.chr19 30132434 403 + 53671032 I a score=531272.000000 s hg38.chr19_GL383574v1_alt 3154 87 + 155864 gcactttgggaggccgaggtgggcagatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctact s panTro5.chr19 36061984 87 + 61309027 gcactttgggaggccgaggtgggcagatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaacgccgtctctact i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814176 86 + 64411610 gcac-ttgggaggccgaggtgggcagatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctact i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231721 87 - 8369475 gcactttgggaggccgaggtgggcagctcacttcaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828573 87 - 106955855 gcactttgggaggccgaggcgggtggatcacttgaggtcaggagtttgagaacagcctggccaacatggtgaaaccctgtctctact i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34583728 85 + 59248254 gcactttgggaggccgagacgggcggatcac--gaggtcaggagatcgcgaccatcctggctaatacggtgaaaccccatctctact i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5386104 87 + 7714307 gcattttgggaggccgaggcaggtggatcacttaaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctatt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29194155 87 + 50890351 gcattttgggaggccgaggcgggtggatcacttgaggtcaagagtttgagaccagcctggccaacatggtgaaaccctgtctctatt i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2252798 87 + 4274983 gcattttgggaggccaaggtgcgtggatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaacctgtctctatt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28483511 86 + 49145316 gcactttgggaggccaaaatgggcagatcac-tgaggtcaggaatttgagaccagcctggccaacatggtaaaaccccatctctact i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5327167 86 + 8899380 gcactttgggaggccaaaacaggcagatcac-tgaggtcaggagtttgagaccagcctggccaacatggtgaaactccatctctact i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1542180 86 - 2680843 gcactttgggaggccaaagcgggcagatcac-tgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccacctctact i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 291907 86 - 4471408 gcactttgggaggccaaaacaggcagatcac-tgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctact i aotNan1.NW_018505377v1 C 0 C 0 e canFam3.chr1 4553165 321 - 122678785 I e manLeu1.NW_012102454v1 803048 5143 - 2385121 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I e rheMac8.chr19 30132434 403 + 53671032 I a score=41405.000000 s hg38.chr19_GL383574v1_alt 3241 5 + 155864 aaaaa s panTro5.chr19 36062071 5 + 61309027 aaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814262 5 + 64411610 aaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231808 5 - 8369475 aaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828660 5 - 106955855 aaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30132837 5 + 53671032 aaaaa i rheMac8.chr19 I 403 C 0 s macFas5.chr19 34583813 5 + 59248254 aaaaa i macFas5.chr19 C 0 I 181 s cerAty1.NW_012005268v1 5386191 5 + 7714307 aaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29194242 5 + 50890351 aaaaa i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2252885 5 + 4274983 aaaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28483597 5 + 49145316 aaaaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5327253 5 + 8899380 aaaaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1542266 5 - 2680843 aaaaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 291993 5 - 4471408 aaaaa i aotNan1.NW_018505377v1 C 0 C 0 e canFam3.chr1 4553165 321 - 122678785 I e manLeu1.NW_012102454v1 803048 5143 - 2385121 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I a score=388778.000000 s hg38.chr19_GL383574v1_alt 3246 49 + 155864 tacaaaaattagccaggcgtggtggtgcacacctgtaatcccagctact s panTro5.chr19 36062076 49 + 61309027 tacaaaaattagccaggcgtggtggtgcacacctgtaatcccagctact i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814267 49 + 64411610 tacaaaaattagccaggcgtggtggtgcacacctgtaatcccagctact i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231813 49 - 8369475 tacaaaaattagccaggcgtggtggtgcacacctgtaatcccagctact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828665 49 - 106955855 tacaaaaattagccgggtgtggtggtgcacacctgtaatcccagctact i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30132842 49 + 53671032 tacaaaaattagccaggcgtgatggtgcacacctgtaatcccagctact i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34583999 49 + 59248254 tacaaaaattagccaggcgtgatggtgcacacctgtaatcccagctact i macFas5.chr19 I 181 C 0 s cerAty1.NW_012005268v1 5386196 49 + 7714307 tacaaaaattagccaggcgtgatggtgcacacctgtaatcccagctact i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29194247 49 + 50890351 tacaaaaattagccaggcgtgatggtgcacgcctgtaatcccagctact i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2252890 49 + 4274983 tacaaaaattagccaggcgtgatggtgcacacctgtaatcccagctact i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28483602 49 + 49145316 cacaaaaattagccaggcatgatggtacatgcctgtagtcccagctact i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5327258 49 + 8899380 tacaaaaattagccaggcatgatggtgcatgcctgtagtcccagctact i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1542271 49 - 2680843 tacaaaaattagccaggcatgatggtgcatgcctatagtcccagctact i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 291998 49 - 4471408 cacaaaaattagccaggcatgatggtgcatgcctgtagtcccagctact i aotNan1.NW_018505377v1 C 0 C 0 e canFam3.chr1 4553165 321 - 122678785 I e manLeu1.NW_012102454v1 803048 5143 - 2385121 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I a score=702003.000000 s hg38.chr19_GL383574v1_alt 3295 106 + 155864 caggaggctgaggcaggagaactgcttgaac------------------------cagggaggtggatgttgcagtgagccataatcgcaccactacactgcagcctgggcaacacagcaacactctgtc s panTro5.chr19 36062125 106 + 61309027 caggaggctgaggcaggagaactgcttgaac------------------------cagagaggtggatgttgcagtgagccataatcgcaccactacactgcagcctgggcaacacagcaacactctgtc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814316 106 + 64411610 caggaggctgaggcaggagaactgcttgaac------------------------cagggaggtggatgttgcagtgagccataatcgcaccactacactgcagcctgggcaacacagcaacactctgtc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231862 106 - 8369475 caggaggctgaggcaggagaactgcttgaac------------------------cagggaggtggatgttgcagtgagccacaatcgcaccattacactgcagcctgggcaacacagcaacactctgtc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828714 104 - 106955855 caggaggctgaggcaggagaactgcttgaag------------------------cagggaggtggatgttgcagtgagccaaaatcgcaccactacactgcagcctgggcaacagagcaaca--ctGTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30132891 106 + 53671032 cgggaggctgaggcaagagaactgcttgaac------------------------taggaaggtggaggttgcagtgagcctaaatctcgccactacactccagcctgggcaacaaagcaatactctatc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34584048 106 + 59248254 cgggaggctgaggcaagagaactgcttgaac------------------------taggaaggtggaggttgcagtgagtctaaatctcgccactacactccagcctgggcaacaaagcaatactctatc i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5386245 105 + 7714307 cgggagg-tgaggcaagagaactgcttgaac------------------------taggaaggtggaggttgcagtgagcctaaatctcgccactacactccagcctgggcaacaaaccaatactgtatc i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29194296 106 + 50890351 cgggaggctgaggcaagagaactgcttgaac------------------------tagggaggtggaggttgcagtgagcctaaatctcgccactatactccagcctgggcgacaaagcaatactctatc i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2252939 106 + 4274983 cgggaggctgaggcaagagaactgcttgaac------------------------tagggaggtggaggttgcagtgagcctaaatctcgccactacactccagcctgggcaacaaagcaatattctatc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28483651 106 + 49145316 caagaggctgaagcaggggaattgcttgaaa------------------------cacggaggcgaatgttgcagtgagctgagatcgtgccactgtgctccagcctgggcaacagagagacactctgtc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5327307 106 + 8899380 caagaaactgaagcaggggaattgcttgaaa------------------------catggaggcggatgttgcagtgagctgagatcgcgccactgcactccagcctgggcaacggagcgacactctgtc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1542320 106 - 2680843 caagaggctgaagcaggggaattgcttgaaa------------------------catggaggcggatgttgcagtgagctgagatcacgccactgcactccagcctgggcaacagagcgacactctgtc i cebCap1.NW_016107633v1 C 0 I 787 s aotNan1.NW_018505377v1 292047 106 - 4471408 caagaggctgaagcaggggaattgcttgaaa------------------------catggaggcggatgttgcagtgagctgagatcgtgccactgcactccagcctgggcaatagagcgacactctgtc i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4553486 116 - 122678785 CAAAGGGCAGGAGCAAGACAAGGGGCTGAACCTTACCCCTCTCCACCACTCTGAACAAATAGCCATATGATGGCTTGA-------------CAC-GTACCCCACCCTCAGAAAAATGGCAGAGATTCTTC i canFam3.chr1 I 321 C 0 e manLeu1.NW_012102454v1 803048 5143 - 2385121 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I a score=5499.000000 s hg38.chr19_GL383574v1_alt 3401 1 + 155864 t s panTro5.chr19 36062231 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814422 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231968 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828818 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30132997 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34584154 1 + 59248254 t i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5386351 1 + 7714307 t i cerAty1.NW_012005268v1 I 1 C 0 s chlSab2.chr6 29194402 1 + 50890351 t i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2253045 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28483757 1 + 49145316 t i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5327413 1 + 8899380 t i saiBol1.JH378197 C 0 I 850 s aotNan1.NW_018505377v1 292153 1 - 4471408 t i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4553602 1 - 122678785 T i canFam3.chr1 C 0 C 0 e cebCap1.NW_016107633v1 1542426 787 - 2680843 I e manLeu1.NW_012102454v1 803048 5143 - 2385121 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I a score=2753.000000 s hg38.chr19_GL383574v1_alt 3402 9 + 155864 g---aa---------------------aaaaaa s panTro5.chr19 36062232 9 + 61309027 g---aa---------------------aaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814423 9 + 64411610 g---aa---------------------aaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231969 9 - 8369475 g---aa---------------------aaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828819 30 - 106955855 a---aacaaacaaacaaacaaacaaacaaacaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30132998 9 + 53671032 t---aa---------------------aaaaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34584155 9 + 59248254 t---aa---------------------aaaaaa i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5386352 9 + 7714307 t---aa---------------------aaaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29194403 12 + 50890351 taaaaa---------------------aaaaaa i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2253046 8 + 4274983 t----a---------------------aaaaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28483758 9 + 49145316 ---caa---------------------aaaaaa i calJac3.chr22 C 0 I 408 s aotNan1.NW_018505377v1 292154 9 - 4471408 ---caa---------------------aaaaaa i aotNan1.NW_018505377v1 C 0 I 435 s canFam3.chr1 4553603 6 - 122678785 -------------------------CTAAAA-- i canFam3.chr1 C 0 C 0 e cebCap1.NW_016107633v1 1542426 787 - 2680843 I e saiBol1.JH378197 5327414 850 + 8899380 I e manLeu1.NW_012102454v1 803048 5143 - 2385121 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I a score=46235.000000 s hg38.chr19_GL383574v1_alt 3411 9 + 155864 aaaaaGCAA s panTro5.chr19 36062241 8 + 61309027 aaaa-GCAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814432 7 + 64411610 aaa--GCAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231978 7 - 8369475 aaa--TCAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828849 9 - 106955855 aAAAATCAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30133007 9 + 53671032 aaaaaTCGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34584164 9 + 59248254 aaaaaTCGA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5386361 9 + 7714307 aaaaaTCGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29194415 9 + 50890351 aaaaaTCGA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2253054 9 + 4274983 aaaaaTCGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28484175 9 + 49145316 AAATATCAA i calJac3.chr22 I 408 C 0 s saiBol1.JH378197 5328264 9 + 8899380 AAAAATCAA i saiBol1.JH378197 I 850 C 0 s cebCap1.NW_016107633v1 1543213 9 - 2680843 AAAAATCAA i cebCap1.NW_016107633v1 I 787 C 0 s aotNan1.NW_018505377v1 292598 9 - 4471408 AAAAATCAA i aotNan1.NW_018505377v1 I 435 C 0 s canFam3.chr1 4553609 9 - 122678785 AAGAATCAA i canFam3.chr1 C 0 C 0 e manLeu1.NW_012102454v1 803048 5143 - 2385121 I e macNem1.NW_012011689v1 4447591 3691 - 13342542 I a score=751395.000000 s hg38.chr19_GL383574v1_alt 3420 76 + 155864 ATGTCTTAAAACACCCACAATC-TGTCATT-GGAGGTTCACC-----AATGTCT-AGAGAATGGCTTCCTTCCTGATCACCCTA s panTro5.chr19 36062249 77 + 61309027 ATGTCTTAAAACACCCACAATC-TGTCATTTGGAGGTTCACC-----AATGTCT-AGAGAATGGCTTCCTTCCTGATCACCCTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814439 77 + 64411610 ATGTCTTAAAACACCCACAATC-TGTCATTTGGAGGTTCACC-----AATGTCT-AGAGAATGGCTTCCTTCCTGATCACCCTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6231985 78 - 8369475 ATGTCTTAAAACACCCACAATCTTGTCATGTGGAGGTTCACC-----AATGTCT-AGAGAATGGCTTCCTTCCTGATCACCCTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828858 77 - 106955855 ATGTCTTAAAACACCCACAATC-TGTCATTTGGAGGTTCACC-----AATGTCT-AGAGAATGGCTTCCTTCCTGATCACCCTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30133016 77 + 53671032 ATGTCTTAAAACACCCACAATC-TGTCATTTAGAGGTTCACC-----AATGTCT-AGAGAATGGCTTCCTTCCTGATCACCCTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34584173 77 + 59248254 ATGTCTTAAAACACCCACAATC-TGTCATTTAGAGGTTCACC-----AATGTCT-AGAGAATGGCTTCCTTCCTGATCACCCTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4451282 77 - 13342542 ATGTCTTAAAACACCCACAATC-TGTCATTTAGAGGTTCACC-----AATGTCT-AGAGAATGGCTTCCTTCCTGATCACCCTA i macNem1.NW_012011689v1 I 3691 C 0 s cerAty1.NW_012005268v1 5386370 77 + 7714307 ATGTCTTAATACACCCACAATC-TGTCATTTAGAGGTTCACC-----AATGTCT-AGAGAATGGCTTCCTTCCTGATCACCCTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29194424 77 + 50890351 ATGTCTTAAAACACCCACAGTC-TGTCATTTAGAGGTTCATC-----AATGTCT-AGAGAATGGCTTCCTTCCTGATCACCCTA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2253063 77 + 4274983 ATGTCTTAAAACACCCACAATC-TGTCATTTAGAGGTTCACC-----AATGTCT-AGAGAATGGCTTCCTTCCTGATCACCCTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28484184 77 + 49145316 ATGTCTTAAAACACCCACAATC-TATCATTTAGAGGTTCACC-----AATATCT-AGAGAATGGCTTCCTACCTGATCAGCCTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5328273 77 + 8899380 ATGTTTTAAAACACCCACAATC-TATCATTTAGAGGTTCACC-----AATGTCT-AGAGAATGGCTTCCTACCTGATCACCCTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1543222 77 - 2680843 ATGTTTTAAAACACCCACAATC-TATCATTTAGAGGTTCACC-----AATGTCT-AGAGAATGGCTTCCTACCTGATCACCCTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 292607 77 - 4471408 ACGTCTTAAAACACCCACAATC-TATCATTTAGAGGTTCACC-----AATGTCT-AGAGAATGGCTTCCTACCTGATCACCCTG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4553618 83 - 122678785 ACATCTCTGAACTTCCACAGTC-TTGCTTTTAGAGGTTCACCAGTTAAATGTCTAAGAGAGTGCCTTCCCACCAGATGATTCTA i canFam3.chr1 C 0 C 0 e manLeu1.NW_012102454v1 803048 5143 - 2385121 I a score=1056593.000000 s hg38.chr19_GL383574v1_alt 3496 104 + 155864 AGTGAAGTCCTCCAGTGAAT-GAGTCCACTAAAAATACAGAGGCCC--TCA-ACAAATGATTTATGACATCGTTCTCACATACATTCCAATATGGT-----GACTTTGATGAA s panTro5.chr19 36062326 104 + 61309027 AGTGAAGTCCTCCAGTGAAT-GAGTCCACTAAAAATACAGAGGCCC--TCA-ACAAATGATTTATGACATCGTTCTCACATACATTCCAATATGGT-----GACTTTGATGAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814516 104 + 64411610 AGTGAAGTCCTCCAGTGAAT-GAGTCCACTAAAAATACAGAGGCCC--TCA-ACAAATGATTTATGACATCGTTCTCACATACATTCCAATATGGT-----GACTTTGATGAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6232063 104 - 8369475 AGTGAAGTCCTCCAGTGAAT-GAGTCCACTAAAAATACAGAGGCCC--TCA-ACAAATGATTTATGACATCGTTCTCACATACATTCCAATATGGT-----GACTTTGATGAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63828935 104 - 106955855 AGTGAAGTCCTCCAGTGAAT-GAGTCCACTAAAAACACAGAGGCCC--TCA-AGAAATGATTTATGACATCGTTCTCACATACATTCCAATATGGT-----GACTTTGATGAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30133093 104 + 53671032 AGTGAAGGCCTCCAGTGAGT-AAGTCCACTAAAAATACAAAGGCCC--TCA-ACAAATGATTTATGACATCGTTCTCATATACATTCCAATATGGT-----GACTTTGATGAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34584250 104 + 59248254 AGTGAAGGCCTCCAGTGAGT-AAGTCCACTAAAAATACAAAGGCCC--TCA-ACAAATGATTTATGACATCGTTCTCATATACATTCCAATATGGT-----GACTTTGATGAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4451359 104 - 13342542 AGTGAAGGCCTCCAGTGAGT-AAGTCCACTAAAAATACAAAGGCCC--TCA-ACAAATGATTTATGACATCGTTCTCATATACATTCCAATATGGT-----GACTTTGATGAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5386447 104 + 7714307 AGTGAAGGCCTCCAGTGAAT-AAGTCCACTAAAAATACAAAGGCCC--TCA-ACAAATGATTTATGACATCGTTCTCATATACATTCCAATATGGT-----GACTTTGATGAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29194501 104 + 50890351 AGTGAAGGCCTCCAGTGAGT-AAGTCCACTAAAAATACAAAGGCCC--TCA-ACAAATGATTTATGACATCGTTCTCATATACATTCCAATATGGT-----GACTTTGATGAA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2253140 104 + 4274983 AGTGAAGTCCTTCAGTGAAT-AAGTCCAGTAAAAATACAAAGGCCC--TCA-ACAAATGATTTATGACATCGTTCTCATATACATTCCAATATGGT-----GACTTTGATGAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28484261 103 + 49145316 AGTGAAATCCTCCAGTGAAT-AAGTCCACTAAAAATACAGAG-ACC--TTA-ACAAATGATTTATGACATTGTTCTCATATGCATTCCAATATGGT-----GACTTTGATGAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5328350 104 + 8899380 AGTGAAATCCTCCAGTGAAT-AAGTCCACTAAAAATAGAGAGAACC--TAA-ACAAATGATTTATTACATCGTTCTCATATGCATTCCAATATGGT-----GACTTTTATGAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1543299 104 - 2680843 AGTCAAATCCTCCAGTGAAT-AAGTCCACTAAAAATACAGAGACCC--TAA-ACAAATAATTTATTACATCGTTCTCATATGCATTCCAATATGGT-----GACTTTGATGAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 292684 104 - 4471408 AGTGAAATCCTCCAGTGAAT-AAGTCCACTAAAAATACAGAGACCC--TAA-ACAAATGATTTATGACATCGTTCTCATATGCATTCCAATATGGT-----GACTTTGATGAA i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111046435 110 - 145441459 AGTCAAGTTCTCCAGTGAATGAAGTATACTACAAACACAGAGCCCC--CAA-ATAGGTTACTTAGGATCTTATTCTCATATATGTTCCAATATGGTCACCAGACTTGGACAAa i mm10.chr7 N 0 I 170 s canFam3.chr1 4553701 110 - 122678785 AGTGAAGTCCTTCAATCTGT-GAGTCCACTGCAAGCACAGAGGCCCCATCACAGAGATGATTAATGATCTGGTTCTCAAGTGTGCTCCA--GTGGTCACCAGAGTTTGATGAA i canFam3.chr1 C 0 C 0 e manLeu1.NW_012102454v1 803048 5143 - 2385121 I a score=2654603.000000 s hg38.chr19_GL383574v1_alt 3600 278 + 155864 AGTCTCCAACATGCAAGACTCACACTAAGATATGCAAGCAAAAAGCAGGACGAGGAGGC-AGGGACATCTTCATGCTATGTAACTGTCAGCACAGCCAAACCCACGCATAGTCAGAACCAGTAGCACATGTGCATAACGGGCCCACCCTACCATGCACACAGCCTGGACAGCAGGCCTGCGTggagcaaacaaagataactcaggaatagaaaagaactttaaaatatctctaTGTACTTGGCCTGTgagctaaatctgcatttatca---tagctggaaat s panTro5.chr19 36062430 278 + 61309027 AGTCTCCAACATGCAAGACTCACACTAAGATATGCAAGCAAAAAGCAGGACGAGGAGGC-AGGGACATCTTCATGCTATGTAACTGTCAGCACAGCCAAACCCACGCATAGTCAGAACCAGTAGCACATGTGCATAACGGGCCCACCCTACCATGCACACAGCCTGGACAGCAGGCCTGCGTggagcaaacaaagataactcaggaatagaaaagaactttaaaatatctctaCGTACTTGGCCTGTgagctaaatctgcatttatca---tagctggaaat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814620 278 + 64411610 AGTCTCCAACATGCAAGACTCACACTAAGATATGCAAGCAAAAAGCAGGACGAGGAGGC-AGGGACATCTTCATGCTATGTAACTGTCAGCACAGCCAAACCCACGCATAGTCAGAACCAGTAGCACATGTGCATAACGGGCCCACCCTACCATGCACACAGCCTGGACAGCAGGCCTGCGTggagcaaacaaagataactcaggaatagaaaagaactttaaaatatctctaCGTACTTGGCCTGTgagctaaatctgcatttatca---tagctggaaat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6232167 278 - 8369475 AGTCTCCAACATGCAAGACTCACACTAAGATATGCAAGCAAAAAGCAGGACGAGGAGGC-AGGGACATCTTCATGCTGTGTAACTGTCAGCACAGCCAAACCCACACATAGTCAGAACCAGTAGCACATGTGCATAACGGGCCCACCCTACCATGCACACAGCCTGGACAGCAGGCCTGCGTggagcaaacaaagataactcaggaatagaaaagaactttaaaatatctctaCGTACTTGGCCTGTgagctaaatctgcatttatca---tagctggaaat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63829039 278 - 106955855 AGTCTCCAACATGCAAGACTCACACTAAGATATGCAAGCAAAAAGCAGGACCAGGAGGC-AGGGACATCTTCATGCGATGTAACTGTCAGCACAGCCAAACCCATGCATAGTCAGAACCAGTAGCACATGTGCATAACAGGCCCACCCTACCATGCACACAGCCTggacagcagacccgcatggagcaaacaaaggtaactcaggaatagaaaagaactttaaaaTTTCTCTACATACTTGGCCTGTgagctaaatctgcatttatca---tagctggaaat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30133197 278 + 53671032 AGTCTCCAACATGCAAGACTCACTCTAAGATAAGCAAGCAAAAAGCAGGACCAGGAGGC-AGGCACATCTCCATGCTATGGAACTGTCAGCACAGCCGAGCCCATGCTTAGTCAGAACCAGTAGCACATGTGCATAATGGGCCCACCCTATCATGCACACAGCCTGGACAGCAGGCCTGCGTGGAGCAAACAGAGGTAACTCAGGAATAGAAAATAACTTTAAAATTTCTCTATGTACTTGGCCCgtgagctaaatctgcatttatca---tagctgggaat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34584354 278 + 59248254 AGTCTCCAACATGCAAGACTCACTCTAAGATAAGCAAGCAAAAAGCAGGACCAGGAGGC-AGGAACATCTCCATGCTATGGAACTGTCAGCACAGCCGAGCCCATGCTTAGTCAGAACCAGTAGCACATGTGCATAATGGGCCCACCCTATCATGCACACAGCCTGGACAGCAGGCCTGCGTGGAGCAAACAGAGGTAACTCAGGAATAGAAAATAACTTTAAAATTTCTCTATGTACTTGGCCCGTgagctaaatctgcatttatca---tagctggaaat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4451463 278 - 13342542 AGTCTCCAACATGCAAGACTCACTCTAAGATAAGCAAGCAAAAAGCAGGACCAGGAGGC-AGGGACATCTCCATGCTATGTAACTGTCAGCACAGCCAAGCCCATGCTTAGTCAGAACCAGTAGCACATGTGCATAATGGGCCCACCCTATCATGCACACAGCCTGGACAGCAGGCCTGCGTGGAGCAAACAGAGGTAACTCAGGAATAGAAAATAACTTTAAAATTTCTCTATGTACTTGGCCCGTgagctaaatctgcgtttatca---tagctggaaat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5386551 278 + 7714307 AGTCTCCAACATGCAAGACTCACTCTAAGATAAGCAAGCAAAAAGCAGGACCAGGAGGC-AGGGACATCTTCATGCTATGTAACTGTCAGCACAGCCAAGCCCATGCTTAGTCAGAACCAGTAGCACATGTGCATAATGGGCCCACCCTATCATGCACACAGCCTGGACAGCAGGCCTGCGTGGAGCAAACAGAGGTAACTCAGGAATAGAAAATAACTTTAAAATTTCTCTATGTACTTGGCCCGTgagctaaatctgcatttatca---tagctggaaat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29194605 278 + 50890351 AGTCTCCAACATGCAAGACTCACTCTAAGATAAGCAAGCAAAAAGCAGGACCAGGAGGC-AGGGACATCTTCATGCTATGTAACTGTCAGCACAGCCAAGCCCATGCTTACTCAGAACCAGTAGCACATGTGCATAACGGGCCCACCCTATCATGCACACAGCCTGGACAGCAGGCCTGCGTGGAGCAAACAGAGGTAACTCAGGAATAGAAAATAACTTTAAAATTTCTCTATGTACTTGGCCCGTgagctaaatctgcatttatca---tagctggaaat i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2253244 278 + 4274983 AGTCTCCAACATGCAAGACTCACTCTAAGATAAGCAAGCAAAAAGCAGGACCAGGAGGC-AGGGACATCTTCATGCTATGTAACTGTCAGCACAGCCAAGCCCATGCATAGTCAGAACCAGTAGCACATGTGCATAATGGGCCCACCCTATCATGCACACAGCCTGGACAGCAGGCCTGTGTGGAGCAAACAAACGTAAGTCAGGAATAGAAAATAACTTTAAAATTTCTCTATGTACTTGGCCCGTgagctaaatctgcatttatca---tagctggaaat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28484364 278 + 49145316 AGTCTCCAAGATGCAAGACTCACTCTAAGATATGCAAGCAAAAAGCAGGACCAGGAGGC-AGGGACATCTTCATGCTATTTAACTGTCAGTACAACCAAACCCATGCATAGTCACAACCAGTAGCACATGTCCATAATGGGCCCACCCAACTATGCACACAGCCTGGACAGCAGGCCTGCATGGAGCAAACAAACATAACTCAGGAATAGAAAAGAACTTTCACGTTTCTCTACATACTTGGCCCATAagctaaatctgcatttatca---tagctggaaat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5328454 281 + 8899380 AGTCTCCAAGATGCAAGACTCACTCTAAGATATGCAAGCAAAAAGCAGGACCAGGAGGC-AGGGACATCTTCATGCTATGTAACTGTCAGTACAGCCAAACCCATGCATAGTCACAACCGGTAGCACATGTCCATAATGGGCCCACCCTACCATGCACACAGCCTGGACAGCAGGCCTGCATGGAGCAAACAAAGGTAACTCAGGAATAGAAAAGAACTTTCATATTTCTCTACATACTTGGCCCATAagctaaatctgcatttatcatagtagctggaaat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1543403 278 - 2680843 AGTCTCCAAGATACAAGACTCGTTCTAAGATATGCAAGCAAAAAGCAGGACCAGGAGGC-AGGGACATCTTCATGCTATGTAACTGTAAGTACAGCCAAACCTATGCATTGTCGCAACCAGTAGCACATGTCCATAATGGGTCCACCCTACCATACACACAGCCTGGACGGCAGGCCTGCATGGAGCAAACAAAGGTAACTCAGGAATAGAAAAGAACTTTCATATTTCTCTACATGCTTGGCCCATAagctaaatctgcatttatca---tagctggaaat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 292788 278 - 4471408 AGTCTTCAAGATGCAAGATTCACTCTAAGATATGCAAGCAAAAAGCAGGACCAGGAGGC-AGGGACATCTTCATGCTATGTAACTGTCAGTACAGCCAAACCCATGCATAGTCACAACCGGTAGCACATGTCCATAATGGGCGCACCCTACCATGCACACAGCCTGAACAGCAGGCCTGCATGGAGCAAACAAAGGTAACTTAGGAATAGAAAAGAACTTTCACATTTCTCTACATACTTGGCCCATAagctaaatctgcatttatca---tagctggaaat i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4553811 262 - 122678785 AGCCTCCAAAATG-AAGACTCACTCTAAGATAAGCAA------------ACCAAGAGGCAAGGGGCATTCTCATACCATGGAACTGTCAGTAGAGCAAAGGCTGTTCAGAGTCAGAACAGGCACCACGCAGACATAAGAGGCACATCCT----TGCATATAGCCTGAACCTCAGTCCTGCATAAAGGAATTAAAGGCAACTCAGAAATGGCAGGGAACTTTAAAATGTCCTTAAGTACTACCCCAGTgagataaaccttcatttaaca---tagctagaaat i canFam3.chr1 C 0 C 0 e mm10.chr7 111046545 170 - 145441459 I e manLeu1.NW_012102454v1 803048 5143 - 2385121 I a score=644180.000000 s hg38.chr19_GL383574v1_alt 3878 59 + 155864 caatagacaatctccaaaatggatgaatcaagaactggtgataatgggatactactcag s panTro5.chr19 36062708 59 + 61309027 caatagacaatctccaaaatggatgaatcaagaactggtgataatgggatactactcag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39814898 59 + 64411610 caatagacaatctccaaaatggatgaatcaagaactggtgataatgggatactactcag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6232445 59 - 8369475 caatagacaatctccaaaatggatgaatcaagaactggtgatgatgggatactactcag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63829317 59 - 106955855 caatagacaatctccaaaatggatgaatcaagaactggtgataATGGGATACTACTCAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30133475 59 + 53671032 caatagacaacgtccaaaatggatgaatcaagaactggtgataatgggatactattcag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34584632 59 + 59248254 caatagacaacgtccaaaatggatgaaacaagaactggtgataatgggatactattcag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4451741 59 - 13342542 caatagacaacgtccaaaatggatgaatcaagaactggtgataatgggatactattcag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5386829 59 + 7714307 caatagacaacgtccaaaatggatgaatcaagaactggtgataatgggatactattcag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29194883 59 + 50890351 caatagacaacgtccaaaatagatgaatcaagaactggtgataatgggatactattcag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 808191 59 - 2385121 CAACAGACAACGTCCAAAATGGATGAATCAAGAACTGGTGATAATGGGATACTATTCAG i manLeu1.NW_012102454v1 I 5143 C 0 s colAng1.NW_012111697v1 2253522 59 + 4274983 caatagacaacgtccaaaatggatgaatcaagaactggtgacaatgggatactattcag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28484642 59 + 49145316 caatagacaatgtccaaaatggatgcatcaacaactggtgataatgagatactatttag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5328735 59 + 8899380 cagtagacaatgtccaaaatggatgcatcaagaactggtgataatgagatactattcaT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1543681 59 - 2680843 cagtagacaatgtccaaaatggatgcatcaagaactggtgataatgagatactattcag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 293066 59 - 4471408 cagtagacaatgtccaaaatgtatgcatcaagaactggtgataatgagatactattCTG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4554073 57 - 122678785 --taagataatgtctaaaatggatgaatcaagaactggtgatgtaagcatattatttag i canFam3.chr1 C 0 C 0 e mm10.chr7 111046545 170 - 145441459 I a score=40116.000000 s hg38.chr19_GL383574v1_alt 3937 5 + 155864 ccatt s panTro5.chr19 36062767 5 + 61309027 ccatt i panTro5.chr19 C 0 I 1 s panPan2.chr19 39814957 5 + 64411610 ccatt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6232504 5 - 8369475 ccatt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63829376 5 - 106955855 CCATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30133534 5 + 53671032 ccatt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34584691 5 + 59248254 ccatt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4451800 5 - 13342542 ccatt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5386888 5 + 7714307 CCATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29194942 4 + 50890351 cca-t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 808250 5 - 2385121 CCATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2253581 4 + 4274983 cca-t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28484701 5 + 49145316 CCATT i calJac3.chr22 C 0 I 301 s saiBol1.JH378197 5328794 5 + 8899380 CCATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1543740 5 - 2680843 CCATT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 293125 5 - 4471408 CTATT i aotNan1.NW_018505377v1 C 0 C 0 e mm10.chr7 111046545 170 - 145441459 I e canFam3.chr1 4554130 0 - 122678785 C a score=10183891.000000 s hg38.chr19_GL383574v1_alt 3942 1049 + 155864 aaaaaaaaagaaattgtgtcacttCACAtgcaaccccagcactttgggaggccaagatgggaggattgcttgaggccaggagtttgagaccagcctggacaggagagggagacctctgtctctaAAaaaagaaaaagacatc-atgtcttttgcagcaacatggat------ggaactggaggccattatcttaaatgaaacagctcagaaacagaaagaaaaatgctgcatgttctcacttgcaagtgggagccaaataatgtgtacacatggaca--taagtgtggactgatagacactggagactaggaaaggtgggaggctgggaggagagtggatgatgagaaatgaacaggtacaggttgggggcagtggctcatgcctataatcccagcactttgagaggcctagttgggtggctctcttgagcccaggagttcaagactagcctgggcaacagggc-aaaaccctgtttccac-aaaaaatacaaaaattagctgggtatggtggtgcatgcctgtagtcccagctacttaggaggctgaggtgggaggattccttgagtccaggaattccaggctacagtgagcagagatcatgccactgcactctagcctgggccacagagtgacagcctgtctc--aaaaaaaa--taataa------aaacaaaaaataacaggcaaaatgtactttattcagatgatgggtacactaaaagccctgacttcaccattattcaatagatccatgtaacaacactgcacttgtacccctaaaattaacacaaatTTAAAATAGgaccaggtgcagtggttcaggcctgtaatcccagcactataggagacagaagtgggtggatcacttaaggtcaggagttcaagaccagcctaagcaacatggtgaaagcctatctctactaaaaatacaaaaattagccaggcaaggtggtgcatgcctgtaatcccagctactcgggaggctgaggcacaagaattacttgaacccaggaggtagaggttgcagtgagcctagatg--------------------ggtgacagcgaga---tccatctc-aaaaaaat s panTro5.chr19 36062773 1049 + 61309027 aaaaaaaaagaaattgtgtcacttCACAtgcaaccccagcactttgggaggccaagatgggaggattgcttgaggccaggagtttgagaccagcctggacaggagagggagacctctgtctctaAAaaaagaaaaagacatc-atgtcttttgcagcaacatggat------ggaactggaggccattatcttaaatgaaacaactcagaaacagaaagaaaaatgctgcatgttctcacttgtaagtgggagccaaataatgtgtacacatggaca--taagtgtggactgatagacactggagactaggaaaggtgggaggctgggaggagagtggatgatgagaaatgaacaggtacaggttgggggcagtggctcatgcctataatcccagcactttgagaggcctagttgggtggctctcttgagcccaggagttcaagactagcctgggcaatagggc-aaaaccctgtttccac-aaaaaatacaaaaattagctgggtatggtggtgcatgcctgtagtcccagctacttaggaggctgaggtgggaggattccttgagtccaggaattccaggctacagtgagcagagatcatgccactgcactctagcctgggccacagagtgacagcctgtctc--aaaaataa--taataa------aaacaaaaaataacaggcaaaatgtactttattcagatgatgggtacactaaaagccctgatttcaccattattcaatagatccatgtaacaacactgcacttgtacccctaaaattaacacaaatTTAAAATAGgaccaggtgcagtggttcaggcctgttatcccagcactataggagacagaggtgggtggatcacttaaggtcaggagttcaagaccagcctaagcaacatggtgaaatcctatctctactaaaaatacaaaaattagccaggcaaggtggtgcatgcctgtaatcccagctactcgggaggctgaggcacaagaattacttgaacccaggaggtagaggttgcagtgagcctagatg--------------------ggtgacagcgaga---tccatctc-aaaaaaat i panTro5.chr19 I 1 C 0 s panPan2.chr19 39814962 1048 + 64411610 -aaaaaaaagaaattgtgtcacttCACAtgcaaccccagcactttgggaggccaagatgggaggattgcttgaggccaggagtttgagaccagcctggacaggagagggagacctctgtctctaAAaaaagaaaaagacatc-atgtcttttgcagcaacatggat------ggaactggaggccattatcttaaatgaaacaactcagaaacagaaagaaaaatgctgcatgttctcacttgtaagtgggagccaaataatgtgtacacatggaga--taagtgtggactgatagacactggagactaggaaaggtgggaggctgggaggagagtggatgatgagaaatgaacaggtgcaggttgggggcagtggctcatgcctataatcccagcactttgagaggcctagttgggtggctctcttgagcccaggagttcaagactagcctgggcaatagggc-aaaaccctgtttccac-aaaaaatacaaaaattagctgggtatggtggtgcatgcctgtagtcccagctacttaggaggctgaggtgggaggattccttgagtccaggaattccaggctacagtgagcagagatcatgccactgcactctagcctgggccacagagtgacagcctgtctc--aaaaataa--taagaa------gaacaaaaaataacaggcaaaatgtactttattcagatgatgggtacgctaaaagccctgatttcaccattattcaatagatccatgtaacaacactgcacttgtacccctaaaattaacacaaatTTAAAATAGgaccaggtgcagtggttcaggcctgtaatcccagcactataggagacagaggtgggtggatcacttaaggtcaggagttcaagaccagcctaagcaacatggtgaaatcctatctctactaaaaatacaaaaattagccaggcaaggtggtgcatgcctgtaatcccagctactcgggaggctgaggcacaagaattacttgaacccaggaggtagaggttgcagtgagcctagatg--------------------ggtgacggcgaga---tccatctc-aaaaaaat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6232509 1049 - 8369475 aaaaaaaaagaaattgcgtcatttCACAtgtaaccccagcactttgggaggccaagatgggagaattgcttgaggcctggagtttgagaccagcctggacaggagagggagacctctgtctctaAAaaaagaaaaagacatc-atgtcttttgcagcaacatggat------ggaactggaggccattatcttaaatgaaacaactcagaaacagaaagaaaaatgctgcatgttctcacttgtaagtgggagccaaataatgtgtacacatggaca--taagtgcggactgatagacactggagactaggaaaggtgggaggctgggaggagagtggatgatgagaaatgaacaggtacaggttgggggcagtggctcatgcctataatcccagcactttgagaggcctagttgggtggctctcttgagcccaggagttcaagactagcctgggcaatagggc-aaaaccctgtttccac-aaaaaatacaaaaattagctgggtatggtggtgcatgcctgtagtcccagctacttaggagactgaggtgggaggattccttgagtccaggaattccaggctagagtgagcagagatcatgccactgcactctagcctgggccacagagtgacagcctgtctc--aaaaaaaa--taataa------aaacaaaaaataacaggcaaaatgtactttattcagatgatgggtacactaaaagccctgacttcaccattattcaatagatccatctaacaacactgcacttatacccctaaaattaacacaaatTTAAAATAGgaccaggtgcagtggttcaggcctgtaatcccagcactacaggagacagaggtgggtggatcacttaaggtcaggagttcaagaccagcctaagcaacatggtgaaatcctatctctactaaaaatacaaaaattagccaggcaaggtggtgcatgcctgtaatcccagctactcgggaggctgaggcacaagaattacttgaacccaggaggtagaggttgcagtgagcctagatG--------------------GGTGACAGCGAGA---TCCATCTC-AAAaaaat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63829381 1029 - 106955855 -AAAAAAAAGA----------------Atgtaaccgcagcactttgggaggccaagatgggaggattgcttgaggccaggagtttgagaccagcctggacaagagagggagacctctgtctctaaaaaaagaaaaagacatc-atgtcttttgcagcaacatggat------agaactggaggccattatcctaaacgaaacaactcagaaacagaaagaaaaatgctgcatgttctcacttgtaagtgggagccaaataatgtgtacacatggaca--taagtgtggactgatagacactggagactaggaaaggtgggaggctgggaggagtgtggatgatgggaaatgaacaggtacaggttgggtgcaatggcttatgactataatcccagcactttgagaggcctagttgggtggctctcttgagcccaggagttcaagaccagcctgggcaacagggcaaaaaccctgtttccacaaaaaaatacaaaaattagctgggtatggtggtgcatgcctgtagtcccagctacttaagaggctgaggtgggaggattgcttgagtccaggaattccaggctatggtgagcagagatcgtgccactacactctagactgggccacagagtgagagcctgtctc--aaaaaaaaattaat-----------taaaaaataacaggtacaatgtactttattcagacaatgggtacactaaaagccctgacttcaccattactcaatagatccatgtaacgacactgcacttgtacccctaaaattaacacaaatTTAAAATAGGACAAggtgcagtggctcaggcctgtaatcccagcactttaggagacagaggtgggtggatcacttaaggtcaggagttcaagaccagcctgagcaacatggtgaaaccctatctctactaaaaatacaaaaattagccaggcaaggtggtgcatgcttgtaatcccagctactcgggaggctgaggcacaagaattgcttgaacccaggatgtagaggttgcagtaagcctaaatg--------------------ggtgacagagtgagactccatctc-aaa----- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30133539 1055 + 53671032 aaaaaaaaagaaattgcatcttttcacctgtatccccagcactttgggaggccaagacgggaggatcacttgaggccaggagtttgagaccagcctagacaacagagggagaccactgtctctaAAaaaagaaaaagacatc-atgtcttttgcagcaacatggat------ggaactggaggccattattctaaatgaaacaactcagaaacagaaagaaaaatactccatgttctcacttataagtgggagccaaataatgtatacacaaggaca-ttaagtgtggactgatagacactggagactaggaaaggtgggaggctgggaggagtgtagatgatgagaaatgaacaggtacaggttgggcgcagtggctcatgcctgtaatcccagcactttgagaggcctagttgggtggctctcttgagcccaggagttcaagaccagcctgggcaataggac-aaaaccctgtttccac-aaaaaatacaaaaattagctgagtatggtggtgcatgcctgtagtcccagctacttaggaggctgaggtgggaggatcgcttgagtccaggaatgccaggctacagtgagcagagatcgtgccgctgcactcttgcctgggccacagagtaacagcctgtctc-aaaaaataa--taataa------aaataaaaaataacaggtgcaatgtactttattcagatgatggatgcgctaaaagccctgacttcaccattactcaatagatccatgtaacaacattgcacttgtactcctaaaattaacacaaatTTAAAATAGgaccaggtgtagtggctcaggcctgtaatcccagcactttaggagacagaggtgggtggatcacttaaggtcaggagttcaagaccagcctgagcaacatggtgaaaccctatctctactaaaaatacaaaaattagccaggcaaggtggtgcatacctgtaatcccagctactcaggaggctgagacacaagaattccttgaacccaggaggtagaggttgcagtgagcctaggtg--------------------ggtgacagagcgagactccatctcaaaaaaaat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34584696 1054 + 59248254 aaaaaaaaagaaattgcatcttttcacctgtatccccagcactttgggaggccaagacgggaggatcacttgaggccaggagtttgagaccagcctagacaacagagggagaccactgtctctaaaaaaagaaaaagacatc-atgtcttttgcagcaacatggat------ggaactggaggccattattctaaatgaaacaactcagaaacagaaagaaaaatactccatgttctcacttataagtgggagccaaataatgtatacacaaggaca-ttaagtgtggactgatagacactggagactaggaaaggtgggaggctgggaggagtgtagatgatgagaaatgaacaggtacaggttgggcgcagtggctcatgcctgtaatcccagcactttgagaggcctagttgggtggctctcttgagcccaggagttcaagaccagcctgggcaataggac-aaaaccctgtttccac-aaaaaatacaaaaattagctgagtatggtggtgcatgcctgtagtcccagctacttaggaggctgaggtgggaggatcgcttgagtccaggaatgccaggctacagtgagcagagatcgtgccgctgcactcttgcctgggccacagagtaacagcctgtctc-aaaaaataa--taataa------aaataaaaaataacaggtgcaatgtactttattcagatgatggatgcgctaaaagccctgacttcaccattactcaatagatccatgtaacaacattgcacttgtactcctaaaattaacacaaatTTAAAATAGgaccaggtgcagtggctcaggcctgtaatcccagcactttaggagacagaggtgggtggatcacttaaggtcaggagttcaagaccagcctgagcaacatggtgaaaccctatctctactaaaaatacaaaaattagccaggcaaggtggtgcatacctgtaatcccagctactcaggaggctgagacacaagaattccttgaacccaggaggtagaggttgcagtgagcctaggtg--------------------ggtgacagagcgagactccatctc-aaaaaaat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4451805 1054 - 13342542 aaaaaaaaagaaattgcatcttttcacctgtatccccagcactttgggaggccaagacgggaggatcgcttgaggccaggagtttgagaccagcctagacaacagagggagaccactgtctctaAAaaaagaaaaagacatc-aagtcctttgcagcaacatggat------ggaactggaggccattattctaaatgaaacaactcagaaacagaaagaaaaatactccatgttctcacttataagtgggagccaaataatgtatacacaaggaca-ttaagtgtggactgatagacactggagactaggaaaggtgggaggctgggaggagtgtagatgatgagaaatgaacaggtacaggttgggcgcagtggctcatgcctgtaatcccagcactttgagaggcctagttgggtggctctcttgagcccaggagttcaagaccagcctgggcaataggac-aaaaccctgtttccac-aaaaaatacaaaaattagctgagtatggtggtgcatgcctgtagtcccagctacttaggagactgaggtgggaggattgcttgagtccaggaatgccaggatacagtgagcagagatcgtgccgctgcactcttgcctgggccacagagtaacagcctgtctc-aaaaaataa--taataa------aaataaaaaataacaggtgcaatgtactttattcagatgatggatgcgctaaaagccctgacttcaccattactcaatagatccatgtaacaacattgcacttgtactcctaaaattaacacaaatTTAAAATAGgaccaggtgcagtggctcaggcctgtaatcccagcactttaggagacagaggtgggtggatcacttaaggtcaggagttcaagaccagcctgagcaacatggtgaaaccctatctctactaaaaatacaaaaattagccaggcaaggtggtgcatacctgtaatcccagctactcaggaggctgagacacaagaattccttgaacccaggaggtagaggttgcagtgagcctaggtg--------------------ggtgacagagcgagactccatctc-aaaaaaat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5386893 1054 + 7714307 TAAAAAAAAGAAATTGCATCTTTTcacctgtatccccagcactttgggaggccaagacgggaggatcgcttgaggccaggagtttgagaccagcctagacaacagagggagaccactgcgtctaaaaaaagaaaaagacatc-atgtcctttgcagcaacatggat------ggaactggaggccattattctaaatgaaacaactcagaaacagaaagaaaaatactccatgttctcacttataagtgggagccaaataatgtatacacaaggaca-ttaagtgtggactgatagacactggagactaggaaaggtgggaggctgggaggagtgtggatgatgagaaatgaacaggtacaggttgggcgcagtggctcatgcctgtaatcccagcactttgagaggcctagttgggtggctctcttgagcccaggagttcaagaccagcctgggcaataggac-aaaaccctgtttccac-aaaaaatacaaaaattagctgggtatggtggtgcatgcctgtagtcccagctacttaggaggctgaggtgggaggattgcttgagtccaggaatgccaggctacagtgagcagagatcgtgccgctgcactctagtctgggccacagagtaagagcctgtctc-aaaaaataa--taataa------aaataaaaaataacaggtgcaatgtactttattcagacgatggatgcactaaaagccctgacttcaccattactcaatagatccatgtaacaacattacacttgtactcctaaaattaacacaaatTTAAAATAGgaccaggtgcagtggctcaggcctgtaatcccagcactttaggagacagagatgggtggatcgcttaaggtcaggagttcaagaccagcctgagcaacatggtgaaaccctatctctcctaaaaatacaaaaattagccaggcaaggtggtgcatacctgtaatcccagctactcaggaggctgagacacaagaattgcttgaacccaggaggtagaggttgcagtgagcctaggtg--------------------ggtgacagagcgagactccacctc-aaaaaaat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29194946 1055 + 50890351 taaaaaaaagaaattgcatcttttcacctgtatccccagcactttgggagtccaagacgggaggactgcttaaggctaggagtttgagaccagcctagacaacagagggagaccactgtgtctaaaaaaagaaaaagacatc-acgtcttttgcagcaacatggat------ggaactggaggctattattctaaatgaaacaactcagaaacagaaagaaaaatactccgtgttctcacttataagtgggagccaatgaatatatacacaaggaca-ttaagtgtggactgatagacactggagactaggaaaggtgggaggttgggaggagtgtggatgatgagaaatgaacaggtacaggttgggcacagtggctcatgcctgtaatcccagcactttgagaggcctagttgggtggctctcttgagcccaagagttcaagaccagcctgggcaataggac-aaaatcctgtttccac-aaaaaatacaaaaattagctgagtatggtggtgcatgcctgtagtcccagctacttaggaggctgaggtgggaggattgcttgagtccaggaatgccaggctacagtgagcagagatcgtgccactgcactctagcctgggccacagagtaagagcctgtctc-aaaaaataa--taataa------aaataaaaaataacaggtgcaatgtactttattcagatgatggatgcgctaaaagccctgacttcaccattactcaatagatccatgtaacaacattgcacttgtactcctaaaattaacacaaatTTAAAATAGgaccaggtgcagtggctcaggcctgtaatcccagcactttaggagacagagatgggtggatcacttaaggtcaggagttcaagaccagcctgagcaacatggcgaaaccctatctctactaaaaatacaaaaattagccaggcaaggtggtgcatgtctgtaatcccagctactcaggaggctgagacacaagaattgcttgaacccaggaggtagaggttgcagtgagcctaggtg--------------------ggtgacagagcgagactccatctcaaaaaaaat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 808255 1054 - 2385121 TAAAAAAAAGAAATTGCATCTTTTcacctgtatccccagcactttgggaggccaagacgggaggatcgcttgaggccaggagtttgagaccagcctagacaatagagggagaccactgtgtctaAAaaaagaaaaagacatc-atgtcctttgcagcaacatggat------ggaactggaggccattattctaaatgaaacaactcagaaacagaaagaaaaatactccatgttctcacttatacgtgggagccaaataatgtatgcacaaggaca-ttaagtgtggactgatagacactggagactaggaaaggtgggaggctgggaggagtgtggatgatgagaaatgaacaggtacaggttgggcgcagtggctcatgcctgtaatcccagcactttgagaggcctagttgggtggctctcttgagcccaggagttcaagaccagcctgggcaataggac-aaaaccctgtttccac-aaaaaatacaaaaattagctgagtatggtggtgcatgcctgtagtcccagctacttaggaggctgaggtgggaggattgcttgagtccaggaatgccaggctacagtgagcagagatcgtgccgctgcactctagcctgggccacagagtaagagcctgtctc-aaaaaataa--taataa------aaataaaaaataacaggtgcaatgtactttattcagacgatggatgcactaaaagccctgacttcaccattactcaatggatccatgtaacaacattacacttgtactcctaaaattaacacaaatTTAAAATAGgaccaggtgcagtggctcaggcctgtaatcccagcactttaggagacagagatgggtggatcgcttaaggtcaggagttcaagaccagcctgagcaacatggtgaaaccctatctctactaaaaatacaaaaattagccaggcaaggtggggcatacctgtaatcccagctactcaggaggctgagacacaagaattgcttgaacccaggaggtagaggttgcagtgagcctaggtg--------------------ggtgacagagcgagactccacctc-aaaaaaat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2253585 1056 + 4274983 taaaaaaaagaaattgcatcttttcacctgtatccccagcactctgggaggccaagacgggaggattgcttgaggccaggagtttgagaccagcctagacaacagagggagaccactgtatctaAAaaaagaaaaagacatc-atgtcttttgcaacaacatggat------ggaactggaggccattattctaaatgaaacaactcagaaacaaaaagaaaaatactccatgttctcacttataagtgggagccaaataatgtatacacaaggaca-ttaagtgtggactgatagacactggagactaggaaaggtgggaggctgggaggagtgtggatgatgagaaatgagcaggtacagtttgagtgcagtggctcatgcctgtaatctcagcactttgagaggcctaattgggtggctctcttgagcccaggagttcaagaccagcctgggcaatagaac-aaaaccctgtttccac-aaaaaatacaaaaattagctgggtatggtggtgcatgcctgcagtcccagctacttaggaggctgaggtgggaggattgcttgagtccaggaataccaggctacagtgagcagagatcgtgccactgcactctagcctgggccacagagtgagagcctgtctcaaaaaaaaaa--taataa------aaataaaaaataacaggtacaatgtactttattcagatgatggatatgctaaaagccctgacttcaccattactcaatagatccatgtaacaacattgcacttgtactcctaaaattaacacaaatTTAAAATAGgaccaggtgcagtggctcaggcctgtagtcccagcacttgaggagacacaggcggatggatcacttaaggtcaggagttcaagaccagcctgagcaacatggtgaaaccctatctctactaaaaatacaaaaattaaccaggcaaggtggtgcatacctgtaatcccagctactcaggaggctgagacacaagaactgcttgaacgcaggaagtagaggttgcagtgagcctaggtg--------------------ggtgacagagcaagactccatgtcaaaaaaaat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28485007 1060 + 49145316 aaaaaacaagaaaTTGTGTCTTTTcacttgtaaccccagcactttgggaggtcaagatgagaggattgcctgaggccaggagtttgagaccagcctggacaacagaggaagacctctgtctctaaaaaatgaaaaagatatc-acgtcttttgcagcaacacagatggaacaggaactggaggccattatcgtaaatgaaacaactcaaaaacagaaagaaaaatactacatagtctcac-tataagtgggagccaaataatgtgtacatatggacattaaagtgtggactgatagacactggagactaggaaagatgggaggctggcaggggtgtgggtgatgaaaaatgaacaggtacaggtcaggcacagtggctcatgcctgtaatcccagcactatgggaggcctagctgggtggctctcttgagctcaggagttcaagatcagcctgggcaatacggc-aaaa--ctgtctccac-aaaaaatacaaaaattagcctggtatggtggcacatgcctgtagtccaagctact-------------ttggaggattgcttgagtccaggaaatcaaggctgcagtgagcagagatcgtgccactgcactccagcctgggccacagagtaagagcctgtctc--aaaaaaaa--aaataaaaataaaaataaaaaataacaggtacaatgtactttatttggatgatgggtacactaaaagacctgacttcaccattactcaatagatccatgtaacaacattgcacttgtacccctaaaattaatacaaatTTAAAATAAGTccaggtgtggtggctcaggcctgtaatcccagctctttgggaggcagagatgggtggatcacttaaagtcaggagttcaagaccagcctgggcaatatggtgaaaccctgtctctactaaaaatacaaaaattagccaggcgtggtggtg-----ctgtaatccgagctactagggaggctgaggcacaagaatcacttgaacccaggaggcagaggttgcagtgagcctagatggcgccactgcactccagctgggtgacagtgcgggactccgtatc-aaa----- i calJac3.chr22 I 301 C 0 s saiBol1.JH378197 5328799 1049 + 8899380 --AAAAAAAGAAATTGTGTCTTTTcacttgtaacccaagcactttgggaggtcaaggtgagaggattgcttgaggccaggagttagagaccagcctggacaacagagggagatctctgtctctaaaaaacgaaaaagacatc-acatcttttgctgcaacatagat------ggaactggaggccattatcataaatgaaacaactcaaaaacagaaagaaaaatactacatggtctcac-tataagtgggagccaaataatgtgtacaaatggacatttaagtgtggactgacagacactggagactaggaaagatgggaggctggcaggggtatgggtgatgaaaaacgaacaggtacaggtcaggcacagtggctcatgcctgtaatcccagcactatgggaggcctagttgggtggctctcttgagcccagaagttcaagaccagcctgggcaatatggg-aaaactctgtcttcac-aaaaaatacaaaaattagcctggtatggtggcacatgcctgtagtccaagctact-------------ttggaagactgcttgagtccaggaattcgaggctgcagtgagcagagatcgtgccactgcactccagcctgggccacagagtaagagcctgtctc--aaaaaaaa--aaataa----------aataaataacaggtactatgtactttatttagatgacaggtacactaaaagacctgacttcaccattactcaatcgatccatgtaacaacattgcacttgtacccctaaaattaatacaaatTTAAAATAAGTccaggtgtggtggctcaggcctgtaatcccagctctttgggaggcagagatgggtggatcacttaaggtcaggagttcaagaccagcgtgggcaacatggtgaaaccctgtctctactaaagatacaaaaattagccaggcatggtggtgcatgcctgtaatctgagctactcaggaggctgaggcacaagaatcgcttgaacccaggaggcagaggttgcagcaaagctagatggcaccactgcactccagccaggtaacagtgcgagactctgtaac-aaa----- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1543745 1060 - 2680843 --AAAAAAGGAAATTGCGTCTTTTcacttgtaaccccagcactttgggaggtcaagatgagaggattgcttgaggccaggagtttgagaccagcctggacaacagagggagacctctgtctctaaaaaatgaaaaagacattaacgtcttttgctgcaacatagatggaactggaactggaggccattatcgtaaatgaaacaactcaaaaacagaaagaaaaatactacatggtctcac-tgtaagcgggagccaaataatgtgtacacatagacattaaagtgtggactgatagacgctggagactaggaaagatgggaggctgacaggggtatgagtgatgaaaaatgaacaggtacaggtcaggcacagcggctcatgcctgtaattccagcactatgggaggcctagttgggtagctctcttgagcccaggagttcaagaccagcctgggcaatatggt-gaaactctgtcttcac-aaaaaatacaaaaactagcctggtatggtggcacatgcctgtagtccaagctact-------------ttggaggactgcttgagtccaggaattcgaggctgcagtgagcagagatcgtgccactgcactccagcctgggccacagagtaagagcctgtctc--aaaaatga--aaataa------aaataaaaaataacaggtacaatgtactttatttagatgatgggtacactaaaagacctgacttcaccattactcaatagatccatgtaacaacattgcacttgtacccctaaaattaatacaaatTTAAAATAAGTccaggtgtggtggctcaggcctgtaatcccagctctttggcaggcagagatgggtggatcacttaagggcaggagttcaagaccagcctgggcaacatggtgaaaccttgtctctactaaaaatacaaaaattagccaggcatggtggtgcatgcctgtaatccgagctactcaggaggctgaggcacaagaatcgcttgaacccaggaggcagaggttgaagcgaggctagatggcgccactgcactccagctgggtgacagtgtgagattccgtatc-aaa----- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 293130 1065 - 4471408 --AAAAAAAGAAATTGCATCTTTTcacttgtaaccccagcactttgggaggtcaagatgagaggattgcttgaggtcaggagtttgagaccagcctggacaacagagggagacctctgtctctaaaaaatgaaaaagacatc-acgtcttttgcagcaacatagatggaactggaactggaggccattatcgtaaatgaaacaactcaaaaacagaaagaaaaatactacatggtctcac-tataagtgggagccaaataatatgtacacatggacattaaagtgtggactgatagacgctggagactaggaaagatgggaggctggcaggggtgtgggtgatgaaaaatgaacaggtacaggtcaggcacagtggctcatgcctgtaatcccagcactatgggaggcctagttgggtggctctcttgagcccaggagttcaagaccagcctgggcaatacagc-gaaactctgtctccac-aaaaaatacaaaaattagcctggtatggtggcacatgcctgtagtccaagctact-------------ttgcaggattgcttgagtccaggaattcgaggctgcagtgagcagagatcgtgccactgcactccagcctgggccacagagtaagagcccgtctc--aaaaataaataaataa--atataaataaaaaataacaggtacaatgtactttatttagatgatgagtacactaaaagacctgacttcaccattactcaatagatctatgtaacaacattgcacttgtacccctaaaattaatacaaatTTAAAATAAGTccaggtgtggtggctcaggcctgtaatcccagctctttgggaggcagagatgggtggatcacttaaggtcaggagttcaagaccagcctgggcaacgtggtgaaaccctgtctctactaaaaatacaaaaattagccaggcatggtggtgcatgcctgtaatccgagctacttgggaggctgaggcacaagaatcgcttgaacccaggaggcagaggttgcagcgagcctagatggcgccactgcactccagccgggtgacagtgagagactccgtatc-aaa----- i aotNan1.NW_018505377v1 C 0 C 0 e mm10.chr7 111046545 170 - 145441459 I e canFam3.chr1 4554130 0 - 122678785 C a score=78231.000000 s hg38.chr19_GL383574v1_alt 4991 7 + 155864 aaaataa s panTro5.chr19 36063822 7 + 61309027 aaaataa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39816010 7 + 64411610 aaaataa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6233558 7 - 8369475 aaaataa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63830410 7 - 106955855 aaaataa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30134594 7 + 53671032 aaaataa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34585750 7 + 59248254 aaaataa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4452859 7 - 13342542 aaaataa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5387947 7 + 7714307 aaaataa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29196001 7 + 50890351 aaaataa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 809309 7 - 2385121 aaaataa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2254641 7 + 4274983 aaaataa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28486067 7 + 49145316 aaaataa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5329848 7 + 8899380 aaaataa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1544805 7 - 2680843 aaaataa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 294195 7 - 4471408 aacataa i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111046715 7 - 145441459 AAGAGAA i mm10.chr7 I 170 C 0 e canFam3.chr1 4554130 0 - 122678785 C a score=185470.000000 s hg38.chr19_GL383574v1_alt 4998 20 + 155864 aaTaactagtgatgtaaccc s panTro5.chr19 36063829 20 + 61309027 aataaCtagtgatgtaaccc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39816017 20 + 64411610 aataaCtagtgatgtaaccc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6233565 20 - 8369475 aataactagtgatgtaaccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63830417 20 - 106955855 aaTaactagtgatgtaaccc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30134601 20 + 53671032 aaTAACTTGTGACCtaacca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34585757 20 + 59248254 aaTAACTTGTGACCTAACCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4452866 20 - 13342542 aaTAACTTGTGACCtaacca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5387954 20 + 7714307 aaTAACTTGTGACCTAACCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29196008 20 + 50890351 aaTAACTTGTGACCTAACCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 809316 20 - 2385121 aaTAACTTGTGACCtaacca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2254648 20 + 4274983 aaTAACTTGTGacataacca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28486074 20 + 49145316 aataactagtgaggtaagca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5329855 20 + 8899380 aaTaactagtgatgtaagca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1544812 20 - 2680843 aataactagtgatgtaagca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 294202 20 - 4471408 aataactagtgatgtaagca i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5396782 20 + 5549422 aagagctggtgatgagaaca i otoGar3.GL873654 N 0 C 0 s mm10.chr7 111046722 20 - 145441459 AGAAGCTGGTGTTATAAGCA i mm10.chr7 C 0 C 0 e canFam3.chr1 4554130 0 - 122678785 C a score=181902.000000 s hg38.chr19_GL383574v1_alt 5018 17 + 155864 tattatttccatgcaac s panTro5.chr19 36063849 17 + 61309027 tattatttccatgcaac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39816037 17 + 64411610 tattatttccatgcaac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6233585 17 - 8369475 tattatttccatgcaac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63830437 17 - 106955855 tattgtttccatgcaac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30134621 17 + 53671032 tattatttccatgcaac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34585777 17 + 59248254 TATTATTTCCATGCAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4452886 17 - 13342542 tattatttccatgcaac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5387974 17 + 7714307 TATTATTTCCATGCAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29196028 17 + 50890351 TATTATTTCCATGCAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 809336 17 - 2385121 tattatttccatgcaac i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2254668 17 + 4274983 tattatttccatgcaac i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28486094 17 + 49145316 tattattttcaggcaac i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5329875 17 + 8899380 tattatttccaggcaac i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1544832 17 - 2680843 tattatttccaggcaac i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 294222 17 - 4471408 tattatttccaggcaac i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5396802 17 + 5549422 tattgtttggagatgat i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111046742 15 - 145441459 TAGCATGTGCGTTCT-- i mm10.chr7 C 0 C 0 s dasNov3.JH563638 251998 17 + 643850 TATGATTTATAGACAGA i dasNov3.JH563638 N 0 C 0 e canFam3.chr1 4554130 0 - 122678785 C a score=6946098.000000 s hg38.chr19_GL383574v1_alt 5035 488 + 155864 a---ataaccacca-------ggagaaacagctgaaggaactaaatatggttgcctccataggaccacggctggggagag------------------------------------------agaggcc-ggaatgatctccatgcatcataaaccctcctgcataatttgattgtttaaccttatgcatgtattagtgatactttga--tTTTT-------AAAAAAA---------TTGTTCCAAAGA-AAATGACTAGAA-G--G------------TTTTTTCTCCTACAGCACTGTTTCATTCTGGAATCTTCCAATTAAGCTTTTGGCTAAACACATAAATATGATAATGATGATTATTCAGGAATCAGAAGGTTTGTAAAAACAT--TGTACCATTAGAGTAATCAAGCTC-TGCTCTAACACATCTTGGCTTTTTGGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTATCTGCCACAGAGTAACAAGAAAACCGTACACAAACCTACTCAGCTGGTAGTTTGAAATCTGCATGTTAACTTAGTACAC s panTro5.chr19 36063866 488 + 61309027 a---ataaccacca-------ggagaaacagctgaaggaactaaatatggttgcctccataggaccacggctggggagag------------------------------------------agaggcc-ggaatgatctccatgcatcataaatcctcctgcataatttgattgtttaaccttatgcatgtattagtgatactttga--tTTTT-------TAAAAAA---------TTGTTCCAAAGA-AAATGACTAGAA-G--G------------TTTTTTCTCCTACAGCACTGTTTCATTCTGGAATCTTCCAATTAAGCTTTTGGCTAAACACATAAATATGATAATGATAATTATTCAGGAATCAGGAGGTTTGTAAAAACAT--TGTACCATTAGAGTAATCAAGCTC-TGCTCTAACACATCTTGGCTTTTTGGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAGGCCATGGGTATCTGCCACAGAGTAACAAGAAAACATTACACAAACCTACTCAGCTGGTAGTTTGAAATCTGCATGTTAACTTAGTACAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39816054 487 + 64411610 a---ataaccacca-------ggagaaacagctgaaggaactaaatatggttgcctccataggaccacggctggggagag------------------------------------------agaggcc-ggaatgatctccatgcatcataaatcctcctgcataatttgattgtttaaccttatgcatgtattagtgatactttga--tTTTT--------AAAAAA---------TTGTTCCAAAGA-AAATGACTAGAA-G--G------------TTTTTTCTCCTACAGCACTGTTTCATTCTGGAATCTTCCAATTAAGCTTTTGGCTAAACACATAAATATGATAATGATAATTATTCAGGAATCAGGAGGTTTGTAAAAACAT--TGTACCATTAGAGTAATCAAGCTC-TGCTCTAACACATCTTGGCTTTTTGGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAGGCCATGGGTATCTGCCACAGAGTAACAAGAAAACATTACACAAACCTACTCAGCTGGTAGTTTGAAATCTGCATGTTAACTTAGTACAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6233602 487 - 8369475 a---ataaccacca-------ggagaaacagctgaaggaactaaatatggttgcctccataggaccacggctggggagag------------------------------------------agaggcc-ggaatgatctccatgcatcat-aaccctcctgcataatttgattgtttaaccttatgtatgtattagtgatactttga--tTTTT-------AAAAAAA---------TTGTTCCAAAGA-AAATGACTAGAA-G--G------------TTTTTTCTCCTACAGCACTGTTTCATTCTGGAATCTTCCAATTAAGCTTTTGGCTAAACACATAAATATGATAATGATAATTATTCAGGAATCAGGAGGTTTGTAAAAACAT--TGTACCATTAGAGTAATCAAGCTC-TGCTCTAACACATCTTGGCTTTTTGGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCACAGAGTAACAAGAAAACATCACACAAACCTACTCAGCTGGTAGTTTGAAATCTGCATGTTAACTTAGTACAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63830454 488 - 106955855 a---ataaccacca-------ggagaaacagctgaaggaactaaatatggttgcctccataggaccacggctggggagag------------------------------------------agaggcc-ggaatgatctccatgcatcataaaccctcctgcataatttgattgtttaaccttatgcatgtattagtgatactttga--tttaa------aaaaaaaa---------GTGTTCCAAAGA-AAATGACTAGAA-G--G------------TTTTTTCTCCTATAGCATTGTTTCATTCTGGAATCTTCCAATTAAGCTTTTGGCTAAACATATAAATATGATAATGATAATTATTCAGGAATCAGGAGGTTTGTAAAAACAT--TGTGCCATTAGAGTAATCAAGCTC-TGCTCTAACACATCTTGGCTTTTTGGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCACAGAGTAACAAGAAAACATCACACAAACCTACTCAGCTGGTAG-TTGAAATCTGCATGTTAACTTAGTACAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30134638 489 + 53671032 a---ataaccacca-------ggagaaacagctgaaggaactaaatatggttacctccataggaccacggctggggagag------------------------------------------agaggct-ggaatgatttccatgcatcataaaccctcctgcataatttgattgtttaatcttatgcatgtattagtgatactttga--ttttt-----taaaaaaaa---------aTGTTCCAAAGA-AAATGACTAGAA-G--G------------TTTTTTCTCCTATAGCATTGTTTCATTCTGGAATCTTCCAATTAAGCTTTTGGCTAAACACATAAATATGATAATGATAATTATTCAGGAATCAGGAGGTTTGTAAAAACAT--TGTGTCATTAGAGTAATCAAGCTC-TGCTCTAACACATCTTGGCTTTTTGGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCACAGACTAACAAGAAAACATCACACAAACCTACTCAGCTGGTAG-TTGAAATCTGCATGTTAACTTTGTACAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34585794 489 + 59248254 A---Ataaccacca-------ggagaaacagctgaaggaactaaatatggttacctccataggaccacggctggggagag------------------------------------------agaggct-ggaatgatttccatgcatcataaaccctcctgcataatttgattgtttaatcttacgcatgtattagtgatactttga--tTTTT-----TTAAAAAAA---------ATGTTCCAAAGA-AAATGACTAGAA-G--G------------TTTTTTCTCCTATAGCATTGTTTCATTCTGGAATCTTCCAATTAAGCTTTTGGCTAAACACATAAATATGATAATGATAATTATTCAGGAATCAGGAGGTTTGTAAAAACAT--TGTGTCATTAGAGTAATCAAGCTC-TGCTCTAACACATCTTGGCTTTTTGGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCACAGACTAACAAGAAAACATCACACAAACCTACTCAGCTGGTAG-TTGAAATCTGCATGTTAACTTTGTACAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4452903 489 - 13342542 a---ataaccacca-------ggagaaacagctgaaggaactaaatatggttacctccataggaccacggctggggagag------------------------------------------agaggct-ggaatgatttccatgcatcataaaccctcctgcataatttgattgtttaaccttatgcatgtattagtgatactttga--tTTTT-----TTAAAAAAA---------AAGTTCCAAAGA-AAATGACTAGAA-G--G------------TTTTTTCTCCTATAGCATTGTTTCATTCTGGAATCTTCCAATTAAGCTTTTGGCTAAACACATAAATATGATAATGATAATTATTCAGGAATCAGGAGGTTTGTAAAAACAT--TGTGTCATTAGAGTAATCAAGCTC-TGCTCTAACACATCTTGGCTTTTTGGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCACAGACTAACAAGAAAACATCACACAAACCTACTCAGCTGGTAG-TTGAAATCTGCATGTTAACTTTGTACAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5387991 498 + 7714307 A---ATAACCACCAGGTTATTGGTgaaacggctgaaggaactaaatatggttacctccataggaccacggctggggagag------------------------------------------agaggct-ggaacgatttccatgcatcataaaccctcctgcataatttgattgtttaaccttatgcatgtattagtgatactttgat-TTTTT-----TTAAAAAAA---------ATGTTCCAAAGA-AAATGACTAGAA-G--GT-----------TTTTTTCTCCTATAGCATTGTTTCATTCTGGAATCTTCCAATTAAGCTTTTGGCTAAACACATAAATATGATAATGATAATTATTCAGAAATCAGGAGGTTTGTAAAAACAT--TGTGTCATTAGAGTAATCAAGCTC-TGCTCTAACACATCTTGGCTTTTTGGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCACAGACTAACAAGAAAACATCACACAAACCTACTCAGCTGGTAG-TTGAAATCTGCATGTTAACTTTGTACAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29196045 489 + 50890351 A---Ataaccacca-------ggagaaacagctgaaggaactaaatatggttacctccataggaccacggctggggagag------------------------------------------agaggct-ggaacgatttccatgcatcataaactctcctgcataatttgattgtttaaccttacgcatgtattagtgatactttga--tTTTT-----TTAAAAAAA---------TTGTTCCAAATA-AAATGACTGGAA-G--T------------TTTTTTCTCCTATAGCATTGTTTCATTCCGGAATCTTCCAATTAAGCTTTTGGCTAAACACATAAATATGATAATGATAATTATTCAGGAATCAGGAGGTTTGTGAAAACAT--TGTGTCATTAGAGTAATCAAGCTC-TGCTCTAACACATCTTGGCTTTTTGGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCACAGACTAACAAGAAAACATCACACAAACCTACTCAGCTGGTAG-TTGAAATTTGCATGTTAACTTTGTGCAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 809353 490 - 2385121 a---ataaccacca-------ggagaaacagctgaaggaactaaatatggttacctccataggaccacggctggggagag------------------------------------------agaggct-ggaacgatttccatgcatcataaaccctcctgcataatttgattgtttaaccttatgcatgtattagtgatactttga--tTTTT-----TAAAAAAAA---------TTGTTCCAAAGA-AAATGACTAGAAGG--T------------TTTTTTCTCCTATAGCATTGTTTCATTCTGGAATCTTCCAATTAAGCTTTTGGCTAAACACATAAATATGATAATGATAATTATTCAGGAATCAGGAGGTTTGTAAAAACAT--TGTGTCATTAGAGTAATCAAGCTC-TGCTCTAACACATCTTGGCTTTTTGGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCACAGACTAACAAGAAAACATCACACAAACCTACTCAGCTGGTAG-TTGAAATCTGCATGTTAACTTTGTACAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2254685 489 + 4274983 a---ataaccacca-------ggagaaacagctgaaggaactaaatatggttacctcgataggaccatggctggggagag------------------------------------------agaggct-agaatgatttccatgcatcataaaccctcctgcataatttgattgtttaaccttatgcatgtattagtgatactttga--tTTTT-----TTAAAAACT---------TTGTTCCAAAGA-AAATGGCTAGAA-G--G------------TTTTTTCTCCTATAGCATTGTTTCATTCTGGAATCTTCCAATTAAGCTTTTGGCTAAACACATAAATATGATAATGATAATTACACAAGAATCAGGAGGTTTGTAAAAACAT--TGTGTCATGAGAGTAATCAAGCTC-TGCTCTAACACATCTTGGCTTCTTGGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCACAGAGTAACAAGAAAACATCACACAAACCTACTCAGCTGGTAG-TTGAAATCTGCATGTTAACTTTGTACAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28486111 485 + 49145316 a---gtaaccacca-------ggagaaacagctgaaggaactaaaaatggttgcctccatgggaccacggctggggagag------------------------------------------agaggcc-agaatgatttccatgcatcataaaccctcctgcataatttcattgtttaaccttatgcatgtattaGTGATATTCTGA--TTTTT-----TTTTAA------------TTCTTCCAAAGA-AAAGGACTAGAA-T--A-------------TTTTTCTCCCATAACATTGTTTCATTCTGGAATCTTCCAATTAAGCTTTTGGCTAAACACATAAATATGATAATGATAATTATTCAGCAATCAGGAGGTTTGTAAAAACAT--TGTGCCATTAGAGTAATCAAGCTC-TGCTCTAACACATCTTGGCTTTTTGGGATAATTAGACCTCACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCACAGAGTAACAAGAAAACATCTTACAAACCTGCTCAGCTGGCAG-TTGAAATCTGCATGTTAACTTAGTACAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5329892 485 + 8899380 a---ataatcacca-------ggagaaacaggtgaaggaactaaatatggttgcctccatgggaccacggctggggagag------------------------------------------agaggcc-agaatgatttccatgcatcataaaccctcctgcataatttcactgtttaaccttatgcatgtattaGTGATACTTT----TTTTT-----TTTTAA------------TTCTTCCAAAGA-AAAGGACTAGAA-G--AT-----------TTTTTTCTCCTATAACATTGTTTCATTCTGGAATCATCCAATTAAGCTTTTGGCTAAACACACAAATATGATAATGATAATTATTCAGGAATCAGGTGCTTTGTAAAAACAT--TGTGCCATTAGAGTAATCAAGCTC-TGCTCTAACACTTCTTGGCTTTTTGGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCACAGAGCGACAAGAAAACATCTTAAAAACCTACTCAGCTGGTAG-TTGAAATCTGCATGTTAACTTAGTACAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1544849 488 - 2680843 a---ataaccacca-------ggagaaacagctgaaggaactaaatatggttgcctccatgggaccacggctggggagag------------------------------------------agaggcc-agaatgatttccatgcatcataaaccctcctgcataatttcattgtttaatcttatgcatgtattagtgatactttgatTTTTTT-----TTTTAA------------TTCTTCCAAAGA-AAAGGACTAGAA-G--A------------TTTTTTCTCCTATAACATTGTTTCATTCTGGAATCTTCCAATTAAGCTTTTGGCAAAACACAGAAATATGATAATGATAATTATTCAGGAATCAGGAGGTTTGTAAAAACAT--TGTGCCATTAGAGTAATCAAGCTC-TGCTCTAACACATCTTGGCTTTTTGGGATAATCAGACCACACTGGAGGCCCATATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCACAGACTAACAAGAAAACATCTTACAAACCTACTCAGCTGGCAG-TTGAAATCTGCATGTTAACTTAGTACAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 294239 484 - 4471408 a---ataaccacca-------ggaga---agctgaaggaactaaatatggttgcctccatgggaccatggctgaggagag------------------------------------------agaggcc-agaatgatttccatgcatcacaaaccctcctgcataatttcattgtttaaccttattcatgtattaGTGATACTTTGAT-TTTTT-----TTTTAA------------TTCTTCCAAAGA-AAAGGACTAGAA-G--A------------TTTTTTCTCCTATAACATTGTTTCATTCTGGAATCTTCCAATTAAGCTCTTGGCTAAACACATAAATATAATAATGATAATTATTCAGGAATCAGGAGGTTTGTAAAAACAT--TGTGCCATTAGAGTAATCAAGCTC-TGCTCTAACACATCTTGGCTTTTCGGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCACAGAGTAACAAGAAAACATCTTACAAACCTACTCAGCTGGCAG-TTGAAATCTGCATGTTAGCTTAGTACAC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5396819 479 + 5549422 gattataaccaccc-------agagaaacagctga--gagttaaatatggtttccccctacagaccatggctg-ggagag------------------------------------------agagact-ggga------------atgataagtccttctacaccatttgattgtttaaccttatgcatgtattagcaataccttga--tt----------aaaaaaa--aaATTTTCTTTTTCAAAGA-TAATGACTGGAA-G--G-------------TTTTTCTCATGTACCATTGTTTCATTCTGGAATCTTCCAATTAAGCTTTTGGCTAAACACATAAATATGATAATGACAATTATTCAGGAATCAGGAGAATTGCAAAAACAT--CGTGTCATTAGAGTAATCAAACCCAGGCCCTAACACATCTCTGCTTTTCAGGATAATTAGACCACACTGGAAGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCACATAGTAACAAGGAAACATCTCACGAAATTACTCAGCCGGCAA-TTGAAATTTGCATGTTAACTTAATACAC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111046757 545 - 145441459 ----CTAGATGACG-------ACAGAGACACCAGAAAGAGTTAAGTGTGCTTG-CTCCCTGGGAAGGCAGCTGGGAAGAGGCCGGGAATGGTGGCCGTGCACTGCAGTTGCTTCTGCAAGGAAGAGGCTGGGAACGGTTGCCCTGCACTGCAGTTGCTTCTGCAGGATGTGA-TGCTTAGTCTCATGCATTTATCAGCTGTATTTCAA--TCTGC-----aaaaaaaaaaaaaaaattttttttCAAAGAGAAATGACTGAGA-G--GT-------TTTCTTTTTCCTTGTGTAGCATTGTTTCATTCTGGAATCTTCCAATTAAGCTTTTGGCTAAACACATAAATATGATAATGATAATTATTCAGGAATTGAGAGGTTTTCGAAAACACTGTGTGCCATTAGAGTAATCAAGCCA-AGCTCTCACACATCTTGGCTTTTCAGGATAATTACACCACACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCACATAGGAACAAGAAAACACCACACACGACTACTCAACTGGCAA-TTGAAATTTGCA-GTTAACATTGCACAC i mm10.chr7 C 0 C 0 s canFam3.chr1 4554130 501 - 122678785 a---gaaaccacca-------agagaaacagctgaatgagttaaaagtagttgcctccaaaggacctcggcaggggagag------------------------------------------gtaggctgggaataattgctgtgcaatataagctcttctgcatgatttgatggtttaaccttgtgtatgtattagcagcactttga--tTTTT-----TTTTTA------------ATTTTTTAAAGA-AAATGACTGGAA-G--GTTTCTTTTTTTTTTTTTTCTTATGTAGCATTGTTTCATTCTGGAATTTTCCAATTAAGCTTTTGGCTAAACACATACATATGATAATGATAATTATTCAGGAATCGGGAGGTTTGTAAAAACATTGTGTGCCATTAGAGTAATCAAGCTC-AGCTCTAACACATCTTGGCTTTTCAGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCATATAGTAACAAGAAAACATCACCCAGAACTACTCAACTGGCAA-TTGAAATTTGCATGTTAACTTAGAACAC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 252015 477 + 643850 G---ATAACTGCCT-------GGAGAAACAGCTGAA-GAGTTAAGCAAGTTT--------------------GAGGAAAG------------------------------------------GAAGACTGGGGACAAATGCTATTCATTAAAAGCCCTTCTGAATAATTTGA-TGGTTAACCTTACGCAAGTATTAGTGGTACTTTGT--TTTTTTGTTTTTGGGGGTT---------TTTTTCCCAAAG-AAATGACTGGAA-GTTG------------TTTTTCTTCTTATAGTATTGTCATATTCTGGAATCCTCCAATTAAGTTTTTGGCTAAACACATAAATATGATAATGATAATTATTCAGGAATCAGGAGGTTTGTAAAAACATTGTGTGCCATTAGAGTAATCAAGCTC-AGCTCTAACACATCTTGGTTTTTTAGGATAATTAGACCACACTGGAGGCCCAGATGGGGTGAATGAGAAAGCCATGGGTGTCTGCCATATAATAACAAGAAAACATCACAGAGAACTACTCAGCTGACAA-TTGAAATTTGCAAGTTAACTTAGTACAC i dasNov3.JH563638 C 0 I 157 a score=650014.000000 s hg38.chr19_GL383574v1_alt 5523 50 + 155864 AAGGAGAAAGGAATAAAAATACTTGGATTTAGGGCAAAACATTTCACTTT s panTro5.chr19 36064354 50 + 61309027 AAGGAGAAAGGAATAAAAATACTTGGATTTAGGGCAAAACATTTCACTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39816541 50 + 64411610 AAGGAGAAAGGAATAAAAATACTTGGATTTAGGGCAAAACATTTCACTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234089 49 - 8369475 AAGGAGAAAGGAATAAAAATACTTGGA-TTAGGGCAAAACATTTCACTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63830942 50 - 106955855 AAGGAGAAAAGAATAAAAATACTTGGATTTAGGGCAAAACATTTCACTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30135127 49 + 53671032 AAGGAAAAAGGAATAAAAATAC-TAGATTTAGGGCAAACCATTTCACTTT i rheMac8.chr19 C 0 I 321 s macFas5.chr19 34586283 49 + 59248254 AAGGAAAAAGGAATAAAAATAC-TAGATTTAGGGCAAACCATTTCACTTT i macFas5.chr19 C 0 I 428 s macNem1.NW_012011689v1 4453392 49 - 13342542 AAGGAAAAAGGAATAAAAATAC-TAGATTTAGGGCAAACCATTTCACTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5388489 49 + 7714307 AAGGAAAAAGGAATAAAAATAC-TAGATTTAGGGCAAACCATTTCACTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29196534 49 + 50890351 AAGGAAAAAGGAATAAAAATAC-TAGATTTAGGGCAAACCATTTCACTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 809843 49 - 2385121 AAGGAAAAAGGAATAAAAATAC-TAGATTTAGGGCAAACCATTTCACTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2255174 49 + 4274983 AAGGAAAAAGGAATAAAAATAC-TAGATTTAGGGCAAACCATTTCACTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28486596 50 + 49145316 AACGAGAAAGGAATAAAAATACTTGGATTTAGGGCAAACCATTTCACTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5330377 50 + 8899380 AATGAGAAAGGAATAAAAATACTTGAATTTAAGGCAAAACATTTCACTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1545337 50 - 2680843 AATGAGAAAGGAATAAAAATACTTGGATTTAAGGCAAAACATTTCACTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 294723 50 - 4471408 AACGAGAAAGGAATAAAAATACTTGGATTTAGGGCAAAACATTTCACTTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5397298 47 + 5549422 AAG---AAATTAATAAAAATGCTCAGATTTGGGGCAAAACATTTCACTTT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111047302 47 - 145441459 AAG---AAAGGAATTGAAATGCTTGGATTGGGGGCAAAACATTTATTTTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4554631 50 - 122678785 AACAAGAAATGAATAAAAATGCCTGGATTTGAGGCACAACATTTCACTTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 252649 50 + 643850 aaaaagaaATGAGTAAAAGTGCTTGGATTTGGGGCAGAATATTCCATTTT i dasNov3.JH563638 I 157 C 0 a score=896595.000000 s hg38.chr19_GL383574v1_alt 5573 71 + 155864 AAAAACTAAGCATAGAACATGAGTGCAGTAATTAATGTCC--TACATAA----CTTATTTTAAGCCCTTGTG--TTAAA---------------------- s panTro5.chr19 36064404 71 + 61309027 AAAAACTAAGCGTAGAACATGAGTGCAGTAATTAATGTCC--TACATAA----CTTATTTTAAGCCCTTGTG--TTAAA---------------------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39816591 71 + 64411610 AAAAACTAAGCGTAGAACATGAGTGCAGTAATTAATGTCC--TACATAA----CTTATTTTAAGCCCTTGTG--TTAAA---------------------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234138 71 - 8369475 AAAAACTAAGCGTAGAACATGAGTGCAATAATTAATGTCC--TACATAA----CTTATTTTAAGCCCTTGTG--TTAAA---------------------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63830992 71 - 106955855 AAAAACTAAGCGTAGAACATGAGTGCAGTAATTAATGTCC--TACATAA----CTTATTTTAAGTCCTTGTG--TTAAA---------------------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30135497 71 + 53671032 aaaaaCTAAGTACAGAACATGAGTGCAGTAATTAATGTCC--TACATAA----CTTATTTTAAGCCCTTGTG--TTAAA---------------------- i rheMac8.chr19 I 321 C 0 s macFas5.chr19 34586760 71 + 59248254 AAAAACTAAGTACAGAACATGAGTGCAGTAATTAATGTCC--TACATAA----CTTATTTTAAGCCCTTGTG--TTAAA---------------------- i macFas5.chr19 I 428 C 0 s macNem1.NW_012011689v1 4453441 71 - 13342542 AAAAACTAAGTACAGAACATGAGTGCAGTAATTAATGTCC--TACATAA----CTTATTTTAAGCCCTTGTG--TTAAA---------------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5388538 71 + 7714307 AAAAACTAAGTATAGAACATGAGTGCAGTAATTAATGTCC--TACATAA----CTTATTTTAAGCCCTTGTG--TTAAA---------------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29196583 71 + 50890351 AAAAACTAAGTATAGAACATGAGTGCAGTAATTAATGTCC--TACATAA----CTTATTTTAAGCCCTTCTG--TGAAA---------------------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 809892 71 - 2385121 AAAAACTAAGTATAGAACATGAGTGCAGTAATTAATGTCC--TACATAA----CTTATTTTAAGCCCTTGTG--TTAAA---------------------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2255223 71 + 4274983 AAAAACTAAGTATAGAACATGAGTGCAGTAATTAATGCCC--TACATAA----CTTATTTTAAGCCCTTGTG--TTAAA---------------------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28486646 73 + 49145316 AAAAACTAAGCCTAGAACATGGGTGCAGTAATTAACGTCC--TACATAA----CTTATTTTAAGCTCTTGTGTATTAAA---------------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5330427 73 + 8899380 AAAAACCAAGCCTAGAACATGGGTGCAGTAATTAATGTCC--CAAATAA----CTTATTTTAAGCTCCTGTGTATTAAA---------------------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1545387 73 - 2680843 AAAAACCAAGCCTAGAACATGGGTGCAGTAATTAATGTCC--CACATAA----CTTATTTTAAGCTCTTGTGTATTAAA---------------------- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 294773 73 - 4471408 AAAAACCAAGCCTAGAACATGGGTGCAGTAATTAATGTCC--TACATAA----CTTATTTTAAGCTCTTGTGTATTAAA---------------------- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5397345 75 + 5549422 AAAAGCCAAACATAGAATATAGGTACAGTAATTAATATCCTATACATAA----CTCATTTTAAGCTCTCATGTGTTAAA---------------------- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111047349 66 - 145441459 AAAAACCAAACATAGAACA-----GTAGTAAGAAATATTC--CTCACAA----CCTATTTTGATCGTGTGAG--TTAAG---------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4554681 73 - 122678785 AAAAACCAAACATAGAACATAGGTGTGATCACAAAGCTCC--TACACAA----CTCCTTTTAAGCTCTCACGTATTAAA---------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 252699 96 + 643850 AAAAATCAAACATAAGATATAGGTGCAGTAATAGATATTC--TACACAATTCTTtttttttaagat-ttatt--ttatttctctccctcctcattgtttgt i dasNov3.JH563638 C 0 C 0 a score=40777.000000 s hg38.chr19_GL383574v1_alt 5644 5 + 155864 ---ATTGA s panTro5.chr19 36064475 5 + 61309027 ---ATTGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39816662 5 + 64411610 ---ATTGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234209 5 - 8369475 ---ATTGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831063 5 - 106955855 ---ATCAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30135568 5 + 53671032 ---ATCGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34586831 5 + 59248254 ---ATCGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4453512 5 - 13342542 ---ATCGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5388609 5 + 7714307 ---ATCGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29196654 5 + 50890351 ---ATCGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 809963 5 - 2385121 ---ATCGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2255294 5 + 4274983 ---ATCGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28486719 5 + 49145316 ---ATAGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5330500 5 + 8899380 ---ATAGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1545460 5 - 2680843 ---ATAGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 294846 5 - 4471408 ---ATAGA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5397420 5 + 5549422 ---ATAGA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4554754 5 - 122678785 ---ATAGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 252795 5 + 643850 gctgt--- i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111047415 0 - 145441459 C a score=623034.000000 s hg38.chr19_GL383574v1_alt 5649 68 + 155864 -----CTCT------TTTGGGTGAG----------------------------GGGAGg--------------------------------ggacag-gt----ctcactctg---tcccccaggtaggagtgcagtggtgcaatca s panTro5.chr19 36064480 68 + 61309027 -----CTCT------TTTGGGTGAG----------------------------GGGAGg--------------------------------ggacag-gt----ctcactctg---tcccccaggtaggagagcagtggtgcaatca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39816667 68 + 64411610 -----CTCT------TTTGGGTGAG----------------------------GGGAGG--------------------------------Ggacag-gt----ctcactctg---tcccccaggtaggagagcagtggtgcaatca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234214 68 - 8369475 -----CTCT------TTTGGCTGAG----------------------------GGGAGg--------------------------------ggacag-gt----ctcactctg---tcccccaggttggagtgcagtggtgcaatca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831068 68 - 106955855 -----CTAT------TGTGGCTGAG----------------------------GGGAGG--------------------------------Ggacag-gt----ctcactctg---tcctccaggttggagtgcagtggtgcaatca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30135573 66 + 53671032 -----CTCT--------TGGCTGTG----------------------------GGGAGG--------------------------------Ggacag-gt----ctcactctg---tcccccaggttggagtgcagtggtgcagtca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34586836 66 + 59248254 -----CTCT--------TGGCTGTG----------------------------GGGAGG--------------------------------Ggacag-gt----ctcactctg---tcccccaggttggagtgcagtggtgcagtca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4453517 66 - 13342542 -----CTCT--------TGGCTGTG----------------------------GGGAGg--------------------------------ggacag-gt----ctcactctg---tcccccaggttggagtgcagtggtgcagtca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5388614 66 + 7714307 -----CTCT--------TGGCTGTG----------------------------GGGAGg--------------------------------ggacag-gt----ctcgctctg---tcccccaggttggagtgcagtggtgcagtca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29196659 66 + 50890351 -----CTCT--------TGGCTATG----------------------------GGGAGg--------------------------------ggacag-gt----ctcactctg---tcccccaggttggagtgcagtggtgcagtca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 809968 66 - 2385121 -----CTCT--------TGGCTGTG----------------------------GGGAGG--------------------------------Ggacag-gt----ctcgctctg---tcccccaggttggagtgcagtggtgcagtca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2255299 66 + 4274983 -----CTTT--------TGGCTGTG----------------------------GGGAGg--------------------------------ggacag-gt----ctcactctg---tcccccaggttggagtgcagtggtgcagtca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28486724 68 + 49145316 -----CTCT------TTCGGCTGTG----------------------------GGGAAg--------------------------------ggacag-gt----ctcactctg---ttcccgaggttgcagtgcagtggtgcaatca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5330505 68 + 8899380 -----CTCT------TTTGGCTGTG----------------------------GGGAAG--------------------------------GAACAg-gt----ctcactctg---ttcccgaggttgcagtgcagtggtgcaatca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1545465 72 - 2680843 -----CTCT------TTTGGCTGTG----------------------------GGGAAG--------------------------------GGACAG-GTCTCActcactctg---ttcccgaggttgcagtgcagtggtgcagtca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 294851 68 - 4471408 -----CTCT------TTTGGCTGTG----------------------------GGGAAg--------------------------------ggacag-gt----ctcactctg---ttcccgaggctgcagtgcagtggtgcaatca i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5397425 98 + 5549422 -----ATCT------TTAAAGCTAG----------------------------AAGTGGTTCCGTCTGTAtcttctattttttttttttttagacagagt----ctcactatg---tcgccctgggtagagtgctgtggtg---tca i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 252800 110 + 643850 ctgttctctgtgcctgttcgttgtgtgctctctgtgtctactcatcttcttttaggagg--------------------------------catcag-ga---actgaacctggaacctcccatgtgggag-gaagtcgcccaatca i dasNov3.JH563638 C 0 I 167 e mm10.chr7 111047415 0 - 145441459 C e canFam3.chr1 4554759 0 - 122678785 C a score=934310.000000 s hg38.chr19_GL383574v1_alt 5717 105 + 155864 cagctcactgcagcctcgacctcccaagctcaaatgatcctcctgcttcagcccc--ccaagtagctgggactacacacatgcaccaccatg-----------------------------------------------------------------------------cctggctaat----------ttttg s panTro5.chr19 36064548 105 + 61309027 cagctcactgcagcctcgacctcccaagctcaaatgatcctcctgcttcagcccc--ccaagtagctgggactacatacatgcaccaccatg-----------------------------------------------------------------------------cctggctaat----------ttttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39816735 105 + 64411610 cagctcactgcagcctcgacctcccaagctcaaatgatcctcctgcttcagcccc--ccaagtagctgggactacatacatgcaccaccatg-----------------------------------------------------------------------------cctggctaat----------ttttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234282 95 - 8369475 cagctcactgcagcct-gacctcccaagctcaaatgatcctcctgcttcagcccccaccaagtagctgggacta-----------caccatg-----------------------------------------------------------------------------cctggctaat----------ttttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831136 105 - 106955855 tagctcactgcagcctcgatctcccaagctcaaatgatcctcccgcttcagcccc--ccaagtagctggtactacatacatgcaccactatg-----------------------------------------------------------------------------cctggctaat----------ttttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30135639 183 + 53671032 tagctcaccgcagcctctatatcccaagctcaaatgatcctcctgcttcagcccc--cctagtagctgggactacataaatgcaccaccacgctgtagagacgggattttgccatgttgtag---------agatggggtttttgtagagacagggttttgcatattgcccaggctgatcgccaactAAttttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34586902 183 + 59248254 tagctcaccgcagcctctatatcccaagctcaaatgatcctcctgcttcagcccc--cctagtagctgggactacataaatgcaccaccacgctgtagagacgggattttgccatgttgtag---------agatggggtttttgtagagacagggttttgcatattgcccaggctgatcaccaactaattttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4453583 183 - 13342542 tagctcaccgcagcctctatatcccaagctcaaatgatcctcctgcttcagcccc--cctagtagctgggactacataaatgcaccaccacgctgtagagacgggattttgccatgttgtagagatggggt---------ttttgtagagacagggttttgcatattgcccaggctgatcgccaactAAttttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5388680 183 + 7714307 tagctcaccgcagcctctatctcccaagctcaaatgatcctcctgcttcagcccc--cctagtagctgggactacataaatgcaccaccatgctgtagagacgggattttgccatgttgtag---------agatggggtttttgtagagacagggttttgcatgttgcccaggctgatcgccaactAAttttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29196725 183 + 50890351 cagctcaccgcagcctctatctcccaagctcaaatgatcctcctgcttcagtccc--cctagtagctgggactacataaatgcaccaccacgctgtagagacaggattttgccatgttgtag---------agatggggtttttgtagaaacagggttttgcatgttacccaggctgatctccaactaattttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 810034 183 - 2385121 tagctcaccgcagcctctatctcccaagctcaaatgatcctcctgcttcagcccc--tctagtagctgggactacataaatgcaccaccacgctgtagagacgggattatgccatgttgtag---------agatggggtttttgtagagacagggttttgcatgttgcccaggctgatcgccaactAAttttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2255365 183 + 4274983 cagctcactgcagcctctatctcccaagctcaaatgatcctcctgcttcagcccc--ccaagtagctgggactacgtaaatgcactaccacgctgtagagacggggttttgccatgttgtag---------agacggagtttttgtagagacacggttttgcatgttgcccaggctgatctccaactAAttttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28486792 105 + 49145316 tagctcactgcatcctcaaactcccaagctcgagtgatcctcctgcttcagcccc--tcaagtagctggtactacatacatacaccaccatg-----------------------------------------------------------------------------cccaactaat----------tttta i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5330573 105 + 8899380 tagctcactgcagcctcaaactcccaagctcgagtgatcctcctgcttccgcccc--taaagtagctgggactacatacatgcaccaccatg-----------------------------------------------------------------------------cccaactaat----------tttta i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1545537 105 - 2680843 tagctcactgcagcctcaaactcccaagctcgagtgatcctcttgcttcagtccc--tcaagtagctgggactacatacaggtaccaccata-----------------------------------------------------------------------------cccaactaat----------tttta i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 294919 105 - 4471408 tagctcactgcagcctcaaactcccaagctcgagtgatcctcctgcttcagcccc--tcaagtagctgggactacatacatgcaccaccatg-----------------------------------------------------------------------------cccaactaat----------tttta i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5397523 105 + 5549422 cagctcataacaacctcaaactcttgggcttaagtggttctcttgcctcagcctc--ccaattagctatgactttaggcacccactgcaacg-----------------------------------------------------------------------------cctggccatt----------ttttg i otoGar3.GL873654 C 0 I 529 e dasNov3.JH563638 252910 167 + 643850 I e mm10.chr7 111047415 0 - 145441459 C e canFam3.chr1 4554759 0 - 122678785 C a score=581256.000000 s hg38.chr19_GL383574v1_alt 5822 57 + 155864 tagagacggggttttgccatgttgccca---ggctgatctccaactcccgggctcaagag s panTro5.chr19 36064653 57 + 61309027 tagagacggggttttgccatgttgccca---ggctgatctccaactcccgggctcaagag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39816840 57 + 64411610 tagagacggggttttgccatgttgccca---ggctgatctccaactcccgggctcaagag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234377 57 - 8369475 tagagacggggttttgccatgttgccca---ggctggtctccaactcctgggctcaagag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831241 57 - 106955855 tagagacggggttttgccatgttgccca---ggctgatctccaactcccaggctcaagag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30135822 57 + 53671032 tagagacgggtttttgccgtgttgccca---ggctgatctccaactcctgggctcaagcg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34587085 57 + 59248254 tagagacggggttttgccgtgttgccca---ggctgatctccaactcctgggctcaagcg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4453766 57 - 13342542 tagagacggggttttgccgtgttgccca---ggctgatctccaactcctgggctcaagcg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5388863 57 + 7714307 tagagacggagatttgccgtgttgccca---ggctgatctccaactcctgggctcaagcg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29196908 57 + 50890351 tagagacggggttttgccgtattgccca---ggctgatctccaactcctgggctcaagcg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 810217 57 - 2385121 tagagacggagatttgccgtgttgccca---ggctgatctccaactcctgggctcaagcg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2255548 60 + 4274983 tagaaatgggattttgccatgttgcccaggcggctgatctccaactcccgggctcaagcg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28486897 57 + 49145316 tagagatggggttttgccatgttgccca---ggctgatctccaactcctgggctcaagca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5330678 57 + 8899380 tagagatggggttttgccatgttgccca---ggctgatctccaactcctgggctcaagca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1545642 57 - 2680843 tagaggtggggttttgccatgttgccca---ggctgatctccaactcctgggctcaaaca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 295024 57 - 4471408 tagagatgaggttttgccatgttgtcca---ggctgatctccaactcctgggctcaagca i aotNan1.NW_018505377v1 C 0 C 0 e dasNov3.JH563638 252910 167 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047415 0 - 145441459 C e canFam3.chr1 4554759 0 - 122678785 C a score=73994.000000 s hg38.chr19_GL383574v1_alt 5879 9 + 155864 atctgtccg s panTro5.chr19 36064710 9 + 61309027 atctgtccg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39816897 9 + 64411610 atctgtccg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234434 9 - 8369475 ttctgtctg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831298 9 - 106955855 atctgttca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30135879 9 + 53671032 atctgtccg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34587142 9 + 59248254 atctgtccg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4453823 9 - 13342542 atctgtccg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5388920 9 + 7714307 atctgtccg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29196965 9 + 50890351 atctgtccg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 810274 9 - 2385121 atctgtccg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2255608 9 + 4274983 atctgtcca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28486954 9 + 49145316 atccatctg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5330735 9 + 8899380 atccatctg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1545699 9 - 2680843 atccatctg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 295081 9 - 4471408 atccatctg i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4554759 7 - 122678785 ATCTGTA-- i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 252910 167 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047415 0 - 145441459 C a score=558657.000000 s hg38.chr19_GL383574v1_alt 5888 54 + 155864 ccttagcctcccaa---agtgctgggattacag--gcatgaaccac--------------------------caggcctgaccTA--- s panTro5.chr19 36064719 54 + 61309027 ccttagcctcccaa---agtgctgggattacag--gcatgaaccac--------------------------caggcctgaccTA--- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39816906 54 + 64411610 ccttagcctcccaa---agtgctgggattacag--gcatgaaccac--------------------------caggcctgaccTA--- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234443 54 - 8369475 ccttagcctcccaa---agtgctgggattacag--gcatgaaccac--------------------------caggcctgaccTA--- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831307 54 - 106955855 ccttagcctcccaa---agtgctgggattacag--gcatgaaccac--------------------------caggcctggccTA--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30135888 54 + 53671032 ccttagcctcccaa---agtgctggaattacag--gcatgagccac--------------------------caggcctggccTA--- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34587151 54 + 59248254 ccttagcctcccaa---agtgctggaattacag--gcatgagccac--------------------------caggcctggccTA--- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4453832 54 - 13342542 ccttagcctcccaa---agtgctggaattacag--gcatgagccac--------------------------caggcctggccTA--- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5388929 54 + 7714307 ccttagcctcccaa---agtgctggaattacag--gcatgagccac--------------------------caggcctggccTA--- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29196974 54 + 50890351 ccttagcctcccaa---agtgctgaaattacag--gcatgagccac--------------------------caggcctgaccTA--- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 810283 54 - 2385121 ccttagccccccaa---agtgctggaattacag--gcatgagccac--------------------------caggcctggccTA--- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2255617 54 + 4274983 ccttagcctcccaa---agtgctgggattacag--gcctgagccac--------------------------caggcctggccTA--- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28486963 53 + 49145316 ccttagcctcccaa---agcgctgggataacag--gcatgagccac--------------------------caggcctggccT---- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5330744 54 + 8899380 ccttagcctcccaa---aatgctgggattacag--gcatgagccac--------------------------caagcctggccTA--- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1545708 54 - 2680843 ccttagcctcccaa---agcgctgggattacag--gcatgagccac--------------------------caggcctggccTA--- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 295090 54 - 4471408 ccttagccttccaa---agcgctgggattacag--gcataagccac--------------------------caggcctggccTA--- i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 253077 88 + 643850 ccgggacctcccaagtgggaggtgggcatccaactgcttgagccacatccactCTCTACACTATTCATTTTTAAGACCTCATGTATTA i dasNov3.JH563638 I 167 C 0 e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047415 0 - 145441459 C e canFam3.chr1 4554766 0 - 122678785 C a score=514892.000000 s hg38.chr19_GL383574v1_alt 5942 44 + 155864 AAACAAAATCTTTAAAGCTAGAAGTGATTTCTTCTATACGTTCC s panTro5.chr19 36064773 44 + 61309027 AAACAAAATCTTTAAAGCTAGAAGTGATTTCTTCTATACATTCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39816960 44 + 64411610 AAACAAAATCTTTAAAGCTAGAAGTGATTTCTTCTATACATTCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234497 44 - 8369475 AAACAAAATCTTTAAAGCTAGAAGTGATTTCTTCTATATGTTCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831361 44 - 106955855 AAACAAAATCTTTAAAGCTAGAAGTGATTTCTTCTGTATGTTCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30135942 44 + 53671032 AAACAGAATATTTAAAGCTAGAAGTGATCTCTTCTACAGGTTCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34587205 44 + 59248254 AAACAGAATCTTTAAAGCTAGAAGTGATCTCTTCTACAGGTTCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4453886 44 - 13342542 AAACAGAATCTTTAAAGCTAGAAGTGATCTCTTCTACAGGTTCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5388983 44 + 7714307 AAACAAAATCTTTAAAGCTAGAAGTGATCTCTTCTATAGGTTCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29197028 44 + 50890351 AAACAGAATCTTTAAAGCTAGAAGTGATCTCTTCTATAGGTTCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 810337 44 - 2385121 AAACAAAATCTTTAAAGCTAGAAGTGATCTCTTCTATAGGTTCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2255671 44 + 4274983 AAACAAAATCTTTAAAGCTAGAAGTGATCTCTTCTATAGGTTCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28487016 44 + 49145316 AAACAGACTCTTTAAAGCTAGAAGTGATTCTTTCTATATGTTCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5330798 44 + 8899380 AAACAGAATCTTTAAAGCTAGAAGTGATTATTTCTATATGTTCC i saiBol1.JH378197 C 0 I 1206 s cebCap1.NW_016107633v1 1545762 44 - 2680843 AAACAGAATCTTTAAAGCTAGAAGTGATTCTTTCTATATATTCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 295144 44 - 4471408 AAACAGAATCTTTAAAGCTAGAAGTGATTCTTTCTATATGTTCC i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111047415 41 - 145441459 AAACAA---TTTTAAAGCTGAAAATAGTTCATTTTACATGGTCT i mm10.chr7 C 0 C 0 s canFam3.chr1 4554766 30 - 122678785 --------------AAACTAGAAGTGGTCCCTTCCATATCTCCT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 253165 44 + 643850 AGACAGAATCTCTAAAACTATAAGTAGTTACTTCTATATCTTCT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5397628 529 + 5549422 I a score=36210.000000 s hg38.chr19_GL383574v1_alt 5986 3 + 155864 ATT s panTro5.chr19 36064817 3 + 61309027 ATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39817004 3 + 64411610 ATT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234541 3 - 8369475 ATT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831405 3 - 106955855 ATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30135986 3 + 53671032 ATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34587249 3 + 59248254 ATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4453930 3 - 13342542 ATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5389027 3 + 7714307 ATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29197072 3 + 50890351 ATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 810381 3 - 2385121 ATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2255715 3 + 4274983 ATT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28487060 3 + 49145316 ATT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1545806 3 - 2680843 ATT i cebCap1.NW_016107633v1 C 0 I 983 s aotNan1.NW_018505377v1 295188 3 - 4471408 ATT i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111047456 3 - 145441459 ATT i mm10.chr7 C 0 C 0 s canFam3.chr1 4554796 3 - 122678785 AGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 253209 3 + 643850 GTT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5397628 529 + 5549422 I e saiBol1.JH378197 5330842 1206 + 8899380 I a score=99947.000000 s hg38.chr19_GL383574v1_alt 5989 14 + 155864 TTTTAAAA-AA----------TTCA s panTro5.chr19 36064820 14 + 61309027 TTTTAAAA-AA----------TTCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39817007 14 + 64411610 TTTTAAAA-AA----------TTCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234544 14 - 8369475 TGTTTAAA-AA----------TTCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831408 14 - 106955855 TTTTAAAA-AA----------TTCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30135989 14 + 53671032 TTTTAAAA-AA----------TTCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34587252 14 + 59248254 TTTTAAAA-AA----------TTCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4453933 14 - 13342542 TTTTAAAA-AA----------TTCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5389030 14 + 7714307 TTTTAAAA-AA----------TTCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29197075 14 + 50890351 TTTTAAAA-AA----------TTCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 810384 14 - 2385121 TTTTAAAA-AA----------TTCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2255718 15 + 4274983 TTTTAAAAGAA----------TTCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28487063 23 + 49145316 -AAAAAAA-AAAACAAAAAACCTCA i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 295191 14 - 4471408 TAAAAAAA-AA----------CTCA i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111047459 14 - 145441459 TTTTTAGA-GG----------CTTA i mm10.chr7 C 0 I 2781 s canFam3.chr1 4554799 14 - 122678785 TTTTAAAA-AT----------GTCA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 253212 14 + 643850 TTTAAAAA-AG----------ATCA i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5397628 529 + 5549422 I e cebCap1.NW_016107633v1 1545809 983 - 2680843 I e saiBol1.JH378197 5330842 1206 + 8899380 I a score=845626.000000 s hg38.chr19_GL383574v1_alt 6003 114 + 155864 CCTCCTACTGTGAGCAC-------------------AATACAAAAAAAAA-------A---TTTAACCTattaattcatctaaccaagatttattgtgttcctactctgagccaggtc--aagttggcactaagaatgcaatggt s panTro5.chr19 36064834 117 + 61309027 CCTCCTACTGTGAGCAT-------------------AATACAAAAAAAAA-------AAAATTTAACCTattaattcatctaaccaagatttattgtgttcctactctgagccaggtc--aagttggcactaagaatgcaacggt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39817021 115 + 64411610 CCTCCTACTGTGAGCAT-------------------AATACAAAAAAAAA-------A--ATTTAACCTattaattcatctaaccaagatttattgtgttcctactctgagccaggtc--aagttggcactaagaatgcaacggt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234558 117 - 8369475 CCTCCTACTGTGAGCAT-------------------AATACCAAAAAAAA-------CAAATTTAACCTattaattcatctaaccaagatttattgtgttcctactctgagccaggtc--aagttggcactaagaatgcaatggt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831422 114 - 106955855 CCTCGTACTGTGAGCAT-------------------AATACAAAAATAAA-------A---TTTAACCAattaattcatctaaccaagatttactgtgttcctactctgagccaggtc--aagttggtgctaagaatgcaatggt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30136003 115 + 53671032 CCTCCTACTGTGAGCAT-------------------AATACCAAAAAAA--------ATTTTTTAACCTattaattcatctaaccaagatatattg-attcctactctcagccaggcc--aagctggaagtaagaatgcaatagt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34587266 115 + 59248254 CCTCCTACTGTGAGCAT-------------------AATACCAAAAACA--------TTTTTTTAACCTATTAATTCATCTAACCAAGATATATTG-ATTCCTACTCTCAGCCAGGCC--AAGCTGGaagtaagaatgcaatagt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4453947 115 - 13342542 CCTCCTACTGTGAGCAT-------------------AATACCAAAAAAA--------TTTTTTTAACCTattaattcatctaaccaagatatattg-attcctactctcagccaggcc--aagctggaagtaagaatgcaatagt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5389044 116 + 7714307 CCTCCTACTGTGAGCAT-------------------AATACCAAAAAAAT-------TTTTTTTAACCTattaattcatctaaccaagatgtattg-attcctactctcagccaggcc--aagctggaactaagaatgcaatggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29197089 114 + 50890351 CCTCCTACTGTGAGCAT-------------------AATACCAAAAAAA---------TTTTTTAACCTATTAATTCATCTAACCAAGATGTATTG-ATTCCTACTCTCAGCCAGGCC--AAGCTGGAACTAAGAATGCAATGGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 810398 115 - 2385121 CCTCCTACTGTGAGCAT-------------------AATACCAAAAAAA--------TTTTTTTAACCTACTAattcatctaaccaagatgtattg-attcctactctcagccaggcc--aagctggaactaagaatgcaatggt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2255733 116 + 4274983 CCTCCTACTGTGAGCAT-------------------AATACAAAAAACAA-------TTTTTTTAACCTATTAATTCATCTAACCAAGATATATTG-ATTCCTATCCTCAGCCAGGCC--AAGCTGGAACTAAGAATGCAATGGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28487086 111 + 49145316 CCTCCTACTGTGAGAAT-------------------AATACCAAAAAAA-------------TTAACCTattaattcatctaaccaagatttattacattcttattctgagccaggcc--aagttggcactaagaatgcaatggt i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 295205 111 - 4471408 CCTCCTACTGTGAGAAT-------------------AATACAAAAAAAA-------------TTAACCTattaattcatctaaccaagatttattacattcttattctgagccaggcc--aagttggcactaagaatgcaatggt i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4554813 131 - 122678785 CCTTCTACTGTAAGCATCTTTCTTGAAAATTCACAAAATACCAAAAAAT-----------CATTTGTCTACTAattcacccgacagagatgttttgcatgtctgctcaaggccctgt---gtgttggtactaagaacgcagtggc i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 253226 135 + 643850 -CCTTTACTGTGACCATCTTTGCTGTAA--------AAAACAAAACAAAAAACCCACATTAATTTATCTGttcattcttccaaaaaagatttattgagtccttaccctgtgcaaggtcctgagttgg-accaagaatgcaatggt i dasNov3.JH563638 C 0 I 47 e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e cebCap1.NW_016107633v1 1545809 983 - 2680843 I e saiBol1.JH378197 5330842 1206 + 8899380 I a score=110181.000000 s hg38.chr19_GL383574v1_alt 6117 14 + 155864 gagaccaggcacgg s panTro5.chr19 36064951 14 + 61309027 gagaccaggcacgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39817136 14 + 64411610 gagaccaggcacgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234675 14 - 8369475 gagaccaggcacgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831536 14 - 106955855 gagaccgggcacgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30136118 14 + 53671032 gagaccgggcacgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34587381 14 + 59248254 gagaccgggcaccg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4454062 14 - 13342542 gagaccgggcacgg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5389160 14 + 7714307 gagactgggcacgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29197203 14 + 50890351 GAgactgggcacgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 810513 14 - 2385121 gagactgggcacgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2255849 14 + 4274983 GAgactgggcacgg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28487197 14 + 49145316 gagaccaggcatgg i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 295316 14 - 4471408 gagaccaagcatgg i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4554944 12 - 122678785 gaaa--aggcacag i canFam3.chr1 C 0 I 168 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e cebCap1.NW_016107633v1 1545809 983 - 2680843 I e saiBol1.JH378197 5330842 1206 + 8899380 I a score=553815.000000 s hg38.chr19_GL383574v1_alt 6131 74 + 155864 cagctcatgtctgtaataccaggactttgggaggctgaggtgggtggatcacctgacgtcaggagttcgagatc s panTro5.chr19 36064965 74 + 61309027 cagctcatgtctgtaataccaggactttgggaggctgaggtgggtggatcacctgacgtcaggagttcaagatc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39817150 74 + 64411610 cagctcatgtctgtaataccaggactttgggaggctgaggtgggtggatcacctgacgtcaggagttcaagatc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234689 74 - 8369475 cagctcatgtctgtaatcccaggactttgggaggctgaggtgggtggatcacctgacgtcaggagttcgagatc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831550 74 - 106955855 cagctcatgtctgtaatcccaggactttgggaggctgaggtgggtggatcacctgacgtcaggagttcgagacc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30136132 73 + 53671032 cagctcacgtctgtaatcccagcactttgggaggctga-gtgggtggatcacctgacatcaggagttcaagacc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34587395 73 + 59248254 cagctcacgtctgtaatcccagcactttgggaggctga-gtgggtggatcacctgacatcaggagttcaagacc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4454076 73 - 13342542 cagctcacgtctgtaatcccagcactttgggaggctga-gtgggtggatcacctgacatcaggagttcaagacc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5389174 74 + 7714307 cagctcacgtctgtaatcccagcactttgggaggctgaggtgggtggatcacctgacatcaggagttcaagacc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29197217 74 + 50890351 cagctcacgtctgtaatcccagcactttgggaggctgaggtgggtggatcacctgacatcaggagttcaagacc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 810527 74 - 2385121 cagctcacgtctgtaatcccagcactttgggaggctgaggtgggtggatcacttgacatcaggagttcaagacc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2255863 74 + 4274983 cagctcacgtctgtaatcccagcactttgggaggctgaggtgggtgaatcacctgacatcaggagttcaagacc i colAng1.NW_012111697v1 C 0 I 384 s calJac3.chr22 28487211 74 + 49145316 cagctcacatctataatcctagcactttgggaggctgaggcaggtagatcatccaaggtcaggagttcaagatc i calJac3.chr22 C 0 I 1010 s aotNan1.NW_018505377v1 295330 74 - 4471408 cacctcatgtctgtaatcccagcactttgggaggctgaggcgggtagatcatccgaggtcaagagttcgagatc i aotNan1.NW_018505377v1 C 0 I 687 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4554956 168 - 122678785 I e cebCap1.NW_016107633v1 1545809 983 - 2680843 I e saiBol1.JH378197 5330842 1206 + 8899380 I a score=10920.000000 s hg38.chr19_GL383574v1_alt 6205 1 + 155864 a s panTro5.chr19 36065039 1 + 61309027 a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39817224 1 + 64411610 a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234763 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831624 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30136205 1 + 53671032 a i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34587468 1 + 59248254 a i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4454149 1 - 13342542 a i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5389248 1 + 7714307 a i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29197291 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 810601 1 - 2385121 a i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2256321 1 + 4274983 A i colAng1.NW_012111697v1 I 384 C 0 s calJac3.chr22 28488295 1 + 49145316 A i calJac3.chr22 I 1010 C 0 s cebCap1.NW_016107633v1 1546792 1 - 2680843 A i cebCap1.NW_016107633v1 I 983 C 0 s aotNan1.NW_018505377v1 296091 1 - 4471408 A i aotNan1.NW_018505377v1 I 687 C 0 s canFam3.chr1 4555124 1 - 122678785 A i canFam3.chr1 I 168 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e saiBol1.JH378197 5330842 1206 + 8899380 I a score=13600.000000 s hg38.chr19_GL383574v1_alt 6206 1 + 155864 g s panTro5.chr19 36065040 1 + 61309027 g i panTro5.chr19 C 0 C 0 s panPan2.chr19 39817225 1 + 64411610 g i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234764 1 - 8369475 g i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831625 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30136206 1 + 53671032 g i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34587469 1 + 59248254 g i macFas5.chr19 C 0 I 2664 s macNem1.NW_012011689v1 4454150 1 - 13342542 g i macNem1.NW_012011689v1 C 0 I 497 s cerAty1.NW_012005268v1 5389249 1 + 7714307 g i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29197292 1 + 50890351 g i chlSab2.chr6 C 0 I 430 s manLeu1.NW_012102454v1 810602 1 - 2385121 g i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2256322 1 + 4274983 G i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28488296 1 + 49145316 G i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5332048 1 + 8899380 G i saiBol1.JH378197 I 1206 C 0 s cebCap1.NW_016107633v1 1546793 1 - 2680843 G i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 296092 1 - 4471408 G i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4555125 1 - 122678785 G i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I a score=13600.000000 s hg38.chr19_GL383574v1_alt 6207 1 + 155864 c s panTro5.chr19 36065041 1 + 61309027 c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39817226 1 + 64411610 c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234765 1 - 8369475 c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831626 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30136207 1 + 53671032 c i rheMac8.chr19 C 0 I 1820 s macFas5.chr19 34590134 1 + 59248254 C i macFas5.chr19 I 2664 C 0 s macNem1.NW_012011689v1 4454648 1 - 13342542 C i macNem1.NW_012011689v1 I 497 C 0 s cerAty1.NW_012005268v1 5389250 1 + 7714307 c i cerAty1.NW_012005268v1 C 0 I 593 s chlSab2.chr6 29197723 1 + 50890351 C i chlSab2.chr6 I 430 C 0 s manLeu1.NW_012102454v1 810603 1 - 2385121 c i manLeu1.NW_012102454v1 C 0 I 539 s colAng1.NW_012111697v1 2256323 1 + 4274983 C i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28488297 1 + 49145316 C i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5332049 1 + 8899380 C i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1546794 1 - 2680843 C i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 296093 1 - 4471408 C i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4555126 1 - 122678785 C i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I a score=159238.000000 s hg38.chr19_GL383574v1_alt 6208 21 + 155864 AACTATCTCAGACAGCAGATC s panTro5.chr19 36065042 21 + 61309027 AACTATCTCAGACAGCAGATC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39817227 21 + 64411610 AACTATCTCAGACAGCAGATC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234766 21 - 8369475 AGCTATCTCAGACAGCAGATC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831627 21 - 106955855 AACTATCTCAGACAGCAGATC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34590135 21 + 59248254 AACTATCTCAGACAGCAGATC i macFas5.chr19 C 0 I 5 s macNem1.NW_012011689v1 4454649 21 - 13342542 AACTATCTCAGACAGCAGATC i macNem1.NW_012011689v1 C 0 I 5 s chlSab2.chr6 29197724 21 + 50890351 AACTATCTCAGACAGCAGATC i chlSab2.chr6 C 0 I 5 s colAng1.NW_012111697v1 2256324 21 + 4274983 AACTATCTCAGACAGCAGATC i colAng1.NW_012111697v1 C 0 I 5 s calJac3.chr22 28488298 21 + 49145316 AACTATCTCAGACAGCAGATC i calJac3.chr22 C 0 I 5 s saiBol1.JH378197 5332050 21 + 8899380 AACTATTTCAGACAGCAGATC i saiBol1.JH378197 C 0 I 5 s cebCap1.NW_016107633v1 1546795 21 - 2680843 AACTATCTCAGACAGCAGATC i cebCap1.NW_016107633v1 C 0 I 5 s aotNan1.NW_018505377v1 296094 21 - 4471408 AACTATCTCAAACAGCAGATC i aotNan1.NW_018505377v1 C 0 I 5 s canFam3.chr1 4555127 17 - 122678785 AACTATCT----CAGCTGCTC i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e manLeu1.NW_012102454v1 810604 539 - 2385121 I e cerAty1.NW_012005268v1 5389251 593 + 7714307 I e rheMac8.chr19 30136208 1820 + 53671032 I a score=1245565.000000 s hg38.chr19_GL383574v1_alt 6229 132 + 155864 -----TCAGCAGTGAGAAGTCTCCCGAACTGAAAAATATCTAGGCT--GAGCTGCAG-TGAGAAGGCTTGACGGGGAGAATCTGGGAGAAGTTTCATGTGGTTTCTGGAATACAGGACAAAGGCTTGGAGGggcgaggca s panTro5.chr19 36065063 132 + 61309027 -----TCAGCAGTGAGAAGTCTCCCAAACTGAAAAATATCTAGGCT--GAGCTGCAG-TGAGAAGGCTTGACAGGGAGAATCTGGGAGAAGTTTCATGTGGTTTCTGGAATACAGGACAAAGGCTTGGAGGggcgaggca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39817248 132 + 64411610 -----TCAGCAGTGAGAAGTCTCCCAAACTGAAAAATATCTAGGCT--GAGCTGCAG-TGAGAAGGCTTGACAGGGAGAATCTGGGAGAAGTTTCATGTGGTTTCTGGAATACAGGACAAAGGCTTGGAGGggcgaggca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234787 132 - 8369475 -----TCAGCAGTGAGAAGTCTCCTGAACTGAAAAATATCTAGGCT--GAGCTGCAG-TGAGAAGGCTTGACGGGGAGAATCTGGGAGAAGTTTCATGTGGTTTCTGGAATACAGGACAAAGGCTTGGAGGggcgaggca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831648 132 - 106955855 -----TCAGCAGTGAGAAGTCTCCTGAACTGAAAAATATCTAGGCT--GAGCTGCAG-TGAGAAGGCTTGACGGGGAGAACCTGGGAGAAGTTTCATGTGGTTTCTGGAATGCAGGACAAAGGCTTGGAGGggcgaggca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34590161 132 + 59248254 -----GCAGCAGTGAGAAATCTCCTGAACTGAAAAATATCTAGGCT--GAGCTGCAG-TGAGAAGCCTTGATGGGAAGAATCTGGGAGAAGTTTCATGTGGTTTCTGGAATGCAGGACAAAGGCTTGGAGGGACGAGGGA i macFas5.chr19 I 5 C 0 s macNem1.NW_012011689v1 4454675 132 - 13342542 -----GCAGCAGTGAGAAATCTCCTGAACTGAAAAATATCTAGGCT--GAGCTGCAG-TGAGAAGGCTTGATGGGAAGAATCTGGGAGAAGTTTCATGTGGTTTCTGGAATGCAGGACAAAGGCTTGGAGGGACGAggca i macNem1.NW_012011689v1 I 5 C 0 s cerAty1.NW_012005268v1 5389844 132 + 7714307 -----TCAGCAGTGAGAAATCTCCCGAACTGAAAAATATCTAGGCT--GAGCTGCAG-TGAGAAGGCTTGATGGGAAGAATCTGGGAGAAGTTTCATGTGGTTTCTGGAATGCAGGACAAAGGCTTGGAGGGACGAAgca i cerAty1.NW_012005268v1 I 593 C 0 s chlSab2.chr6 29197750 132 + 50890351 -----GCAGCAGTGAGAAATCTCCTGAACTGAAAAATATCTAGGCT--GAGCAGGAG-TGAGAAGGCTTGATGGGAAGAATCTGGGAGAAGTTTCATGTGGTTTCTGGAATGCAGGACAAAGGCTTGGAGGGACGAggca i chlSab2.chr6 I 5 C 0 s manLeu1.NW_012102454v1 811143 132 - 2385121 -----tcagcagtgagaaatctcccgaactgaaaaatatctaggct--gagctgcag-tgagaaggcttgatgggaagaatctgggagaagtttcatgtggtttctggaatgcaggacaaaggcttggaggGACGAAgca i manLeu1.NW_012102454v1 I 539 C 0 s colAng1.NW_012111697v1 2256350 132 + 4274983 -----GCAGCAGTGAGAAATCTCCTGAACTGAAAAATATCTAGGCT--GAGCTGCAG-TAAGAAGGCTTGATGGGAAGAATCTGGGAGAAGTTTCATGTGGTTTCTGGAATGCAGGACAAAGGGTTGGAGGGAAGAggca i colAng1.NW_012111697v1 I 5 C 0 s calJac3.chr22 28488324 135 + 49145316 -----GCAGCAGTGAGAAGTCTCCTCAACTGAAAAATCTCCAGGCTGAGAGCTGCAGTTGAGAAGGCTTGATGGGGAGAATCTGGGAGAAGTTACATGTGGTTTCTGGAATGCAGGACAAAGGCTTGAAGGGGAGAggcg i calJac3.chr22 I 5 C 0 s saiBol1.JH378197 5332076 134 + 8899380 -----GCAGCAGTGAAAAGTCTCCTCAACTGAAAAATATCTAGGCTGAGAGCTGCAG-TGAGAAGGCTTGAGGGGGAGAATCTGGGAGAAGTTACATGTGGTTTCTGGAATGCAGGACAAAGGCTTGAAGGGACTAggcg i saiBol1.JH378197 I 5 C 0 s cebCap1.NW_016107633v1 1546821 134 - 2680843 -----GCAGCAGTGAAAAGTCTCCTCAACTGAAAAATATCTAGGCTGAGAGCTACGG-TGAGAAGGCTTGAGGGGGAGAATCTGGGAGAAGTTACATGTGGTTTCTGGAATGCAGGACAAAGGCTTGAAGGGgctaggcc i cebCap1.NW_016107633v1 I 5 C 0 s aotNan1.NW_018505377v1 296120 134 - 4471408 -----GCAGCAGTGAGAAGTCTCCTCAACTGAAAAATATCTAGGCTGAGAGCTGCAG-TGAGAAGGCTTGAGGGGGAGAATCTGGGAGAAGTTACATGTGGTTTCTGGAATACAGGACAAAGGCTTGAAGGGGCGAggcg i aotNan1.NW_018505377v1 I 5 C 0 s canFam3.chr1 4555144 138 - 122678785 CCAGGACAGTAGTGAGAAGCCCTCTGACTGGAGGGATATCTAGATGAGGAGCTGCAG-TGAGAAGGCTCCAGAGGGAGAATCCCAGAGAAGCCTAATGTGGCTTCCAGATCAGAGGACAAAGGC-TGGAGGGTAGAGACA i canFam3.chr1 C 0 I 492 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e rheMac8.chr19 30136208 1820 + 53671032 I a score=148446.000000 s hg38.chr19_GL383574v1_alt 6361 22 + 155864 cagtggctcat--------------------gcctg-taatcc s panTro5.chr19 36065195 22 + 61309027 cagtggctcac--------------------gcctg-taatcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39817380 22 + 64411610 cagtggctcat--------------------gcctg-taatcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234919 22 - 8369475 cagtgactcct--------------------gcctg-taatcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831780 22 - 106955855 cagtggctaat--------------------gcctg-taatcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34590293 22 + 59248254 cagtggctcac--------------------tcctg-taatcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4454807 22 - 13342542 cagtggctcac--------------------tcctg-taatcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5389976 22 + 7714307 cagtggctcac--------------------tcctg-taatcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29197882 22 + 50890351 caggggctcac--------------------tcctg-taatcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 811275 22 - 2385121 cagtggctcac--------------------tcctg-taatcc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2256482 22 + 4274983 cagtggctcac--------------------tcctg-taatcc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28488459 42 + 49145316 cagtggctcatgcctgtaatcctaacacCATgcctg-taatcc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5332210 16 + 8899380 tggtg--------------------------gcctt-taatcc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1546955 23 - 2680843 cagtggctcag--------------------gcctgataatcc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 296254 22 - 4471408 cagtggctcac--------------------gccta-taatcc i aotNan1.NW_018505377v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555282 492 - 122678785 I e rheMac8.chr19 30136208 1820 + 53671032 I a score=421979.000000 s hg38.chr19_GL383574v1_alt 6383 42 + 155864 tagcacttgggaaagcggaggcaggcagattgcctgaggcca s panTro5.chr19 36065217 42 + 61309027 tagcacttgggaaagcggaggcaggcagattgcctgaggcca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39817402 42 + 64411610 tagcacttgggaaagcggaggcaggcagattgcctgaggcca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234941 42 - 8369475 tagcacttgggaaagcggaggcaggcagattgcctgaggcca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831802 42 - 106955855 tagcacttgggaaagcggaggcaggcagattgactgaggcca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30138028 42 + 53671032 Tagcacttgggaaagcggagggaggtggattgcctgaggcca i rheMac8.chr19 I 1820 C 0 s macFas5.chr19 34590315 42 + 59248254 tagcacttgggaaagcggagggaggtggattgcctgaggcca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4454829 42 - 13342542 tagcacttgggaaagcggagggaggtggattgcctgaggcca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5389998 42 + 7714307 tagcacttgggaaagcggagggaggtggattgcctgaggcca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29197904 42 + 50890351 tagcacttgggaaagcggagggaggtggattgcctgaggcca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 811297 42 - 2385121 tagtacttgggaaagcggagggaggtggattgcctgaggcca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2256504 42 + 4274983 cagcacttgggaaagcggaaggaggtggattgcctgaggcca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28488501 42 + 49145316 taggacttggggaggcggaggcaggcggattgcctgaggcca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5332226 42 + 8899380 tagcacttggtgaggtggaggcaggaggattgcctgaggcca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1546978 42 - 2680843 tagcacttggtgaggcggaggcaggcagattgcctgaggcca i cebCap1.NW_016107633v1 C 0 I 653 s aotNan1.NW_018505377v1 296276 42 - 4471408 tagcacttggggaggcggaggcaggcggattgcctgaggcca i aotNan1.NW_018505377v1 C 0 I 628 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555282 492 - 122678785 I a score=12438.000000 s hg38.chr19_GL383574v1_alt 6425 3 + 155864 -gaa s panTro5.chr19 36065259 3 + 61309027 -gaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39817444 3 + 64411610 -gaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234983 3 - 8369475 -gaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831844 3 - 106955855 -gaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30138070 3 + 53671032 -gaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34590357 3 + 59248254 -gaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4454871 3 - 13342542 -gaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5390040 3 + 7714307 -gaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29197946 3 + 50890351 -gaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 811339 3 - 2385121 -gaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2256546 3 + 4274983 -gaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28488543 3 + 49145316 aga- i calJac3.chr22 C 0 I 1064 s saiBol1.JH378197 5332268 3 + 8899380 aga- i saiBol1.JH378197 C 0 I 598 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555282 492 - 122678785 I e aotNan1.NW_018505377v1 296318 628 - 4471408 I e cebCap1.NW_016107633v1 1547020 653 - 2680843 I a score=3069096.000000 s hg38.chr19_GL383574v1_alt 6428 548 + 155864 gttcaagaccaacctggccaacatagtgagactcacctctctattTATATTTAATCATATTATATGATAAtgaaatggtttggacctgtattcccactcaaatctcatgtcgagttgaaatcctcaatgttgtaaggggggcctggtaggaggtgatcagatcatgggggtggtttctaatgggtttgcaccatccccctagtgctgatctcatgatagagttctcaagagatctccatggctgtttaaaagtgtgtgagcggtggttcctgcctgtaatcccagcacttt----------ggtgggtggatcacttgc-ggtcaggagtttgagactagccttggtaacaagatgaaaccccatctctactaaaaataccaaaattagctgggcgtggtggtgggcacctgtaatcccagctacttggcaggctgaggcaggagaatcgcttgagcccaggaggcaaagattg-cagtgaaccgagattgcgccactgcac-tccagcctgggccacagagtgaaactccatctcaaaacaaaac-aaaaattgtgtgaca s panTro5.chr19 36065262 548 + 61309027 gttcaagaccaacctggccaacatagtgagactcacctctctattTATATTTAATCATATTATATGATAAtgaaatggtttggacctgtattcccacccaaatctcatgtcgagttgaaatccccaatgttgtaaggggggcctggtaggaggtgatcagatcatgggggtggtttctaatgggttagcaccatccccctagtgctgacctcatgatagagttctcaagagatctccatggctgtttaaaagtgtgtgagcggtggttcctgcctgtaatcccagcacttt----------ggtgggtggatcacttgc-agtcaggagtttgagactagccttggtaacaagatgaaaccccatctctactaaaaataccaaaattagctgggcgtggtggtgggcacctgtaatcccagctacttggcaggctgaggcaggagaatcgcttgagcccaggaggcaaaggttg-cagtgaaccgagattgcgccactgcac-tccagcctgggccacagagcgaaactccatctcaaaacaaaac-aaaaattgtgtgaca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39817447 548 + 64411610 gttcaagaccaacctggccaacatagtgagactcacctctctattTATATTTAATCATATTATATGATAAtgaaatggtttggacctgtattcccacccaaatctcatgtcgagttgaaatccccaatgttgtaaggggggcctggtaggaggtgatcagatcatgggggtggtttctaatgggttagcaccatccccctagtgctgatctcatgatagatttctcaagagatctccatggctgtttaaaagtgtgtgagcggtggttcctgcctgtaatcccagcacttt----------ggtgggtggatcacttgc-agtcaggagtttgagactagccttggtaacaagatgaaaccccatctctactaaaaataccaaaattagctgggcgtggtggtgggcacctgtaatcccagctacttggcaggctgaggcaggagaatcgcttgagcccaggaggcaaaggttg-cagtgaaccgagattgcgccactgcac-tccagcctgggccacagagcgaaactccatctcaaaacaaaac-aaaaattgtgtgaca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6234986 546 - 8369475 gttcaagaccaacctggccaacatagtgagactcacctctctattTATATTTAATCATATTATATGATAAtgaaatggtttggacctgtattcccactcaaatctcatgtcgagttgaaatccccaatgttgtaaggggggcctggtaggaggtgatcagatcat-ggggtagtttctaatggtttagcaccatccccctagtgctgatctcatgatagagttctcaagagatctccacggctgtttaaaagtgtgtgagcggtggttcctgcctgtaatcccagcacttt----------ggtgggtggatcacttgc-agtcaggagtttgagactagccttggtaacaagatgaaa-cccatctctactaaaaataccaaaattagctgggcgtggtggtgggcacctgtaatcccagctacttggcaggctgaggcaggagaatcgcttgagcccaggaggcaaaggttg-cagtaaaccgagattgcgccactgcac-tccagcctgggccacagagcgaaaatccatctcaaaacaaaac-aaaaattgtgtgaca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63831847 548 - 106955855 gttcaagaccaacctggccaacatagtgagacccacttctctattTATATTTAATCATATTATATGATAAtgaaatggtttggacctgtgttcccatccaaatctcatgtcgagttgaaatccccaatgttggaaggggggcctggtaggaggtgatcagatcatgggggtggtttctaatggtttagcaccatccccctagtgctactctcatgatagagttctcacgagatctccatggctgtttaaaagtgtgtgagcggtggctcctgcctgtaatcccagcacttt----------ggtgggtggatcacttgg-ggtcaggagtttgagactagtcttggtaacaagatgaaatcccatctctactaaaaataccagaattagctgggcatggtggcgggcgcctgtaatcccagctacttggcaggctgaggcaggagaatcgcttgagcccaggtggtagatgttg-cagtgaaccaagattgcgccactgcac-tccagcctggggcgcagagcaaaactctatctcgaaacaaaac-aaaaattgtgtgaca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30138073 557 + 53671032 gttcaagaccaacctggccaacatagcgagacccacctctctCTTTATACTTAATCATATTATATGATAAtgatatggtttgaatctgtgttcccacccaaatctcatgccgagttgaaatccccaatgttggaagtggggcctggtgggaggtgatcagatcatgggggtgctttctaatggtttagcatcatccccc-agtgctgctctcatgatagagttctcacgagctctccatggctgttgaaaagtgtgtgagaggtggctcctgcctgtcatcccagcactttgggaggctgaggcgggtggatcacttgg-ggtcaggagtttgagaccagcctgggtaacaaggtgaaaccccatctctactaaaaataccaaaattagctggacgtggtggtgggcgcctgtaatcccagctactcggcagactgaggcaggagaatcgcttgagcctaggaggcagaggttg-cagtgaaccgagatcgcaccactgcac-tccagcctgggccacagagcgaaactccatctcaaaacaaaac-aaaacttgtgtgaca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34590360 557 + 59248254 gttcaagaccaacctggccaacatagcgagacccacctctctCTTTATACTTAATCATATTATATGATAAtgatatggtttgaatctgtgttcccacccaaatctcatgccgagttgaaatccccaatgttggaagtggggcctggtgggaggtgatcagatcatgggggtgctttctaatggtttagcatcatccccc-agtgctgctctcatgatagagttctcacgagctctccatggctgttgaaaagtgtgtgagaggtggctcctgcctgtcatcccagcactttgggaggctgaggcgggtggatcacttgg-ggtcaggagtttgagaccagcctgggtaacaaggtgaaaccccatctctactaaaaataccaaaattagctggacgtggtggtgggcgcctgtaatcccagctactcggcagactgaggcaggagaatcgcttgagcctaggaggcagaggttg-cagtgaaccgagatcgcaccactgcac-tccagcctgggccacagagcgaaactccatctcaaaacaaaac-aaaacttgtgtgaca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4454874 557 - 13342542 gttcaagaccaacctggccaacatagcgagacccacctctctCTTTATACTTAATCATATTATATGATAAtgatatggtttgaatctgtgttcccacccaaatctcatgccgagttgaaatccccaatgttggaagtggggcctggtgggaggtgatcagatcatgggggtgctttctaatggtttagcatcatccccc-agtgctgctctcatgatagagttctcacgagctctccatggctgttgaaaagtgtgtgagaggtggctcctgcctgtcatcccagtactttgggaggctgaggcgggtggatcacttggaggtcaggagtttgagaccagcctgggtaacaaggtgaaa-cccatctctactaaaaataccaaaattagctggacgtggtggtgggcgcctgtaatcccagctactcggcagactgaggcaggagaatcgcttgagcctagga-gcagaggttgccagtgaaccgagatcgcaccactgcacttccagcctgg--cacagagcgaaactccatctcaaaacaaaacaaaaacttgtgtgaca i macNem1.NW_012011689v1 C 0 I 4383 s cerAty1.NW_012005268v1 5390043 557 + 7714307 gttcaagaccaacctggccaacatagcgagacccacctctctCTTTATACTTAATCATATTATATGATAAtgatatggtttgaatctgtgttcccacccaaatctcatgccgagttgaaatccccaatgttggaagtggggcctggtgggaggtgatcagatcatgggggtgctttctaatggtttagcatcatccccc-agtgctgctctcatgatagagttctcacgagctctctatggctgttgaaaagtgtgtgagaggtggctcctgcctgtcatcccagcactttgggaggctgaggcgggtggatcacttgg-ggtcaggagtttgagactagcctgggtaacaaggtgaaaccccatctctactaaaaataccaaaattagctggacgtggtggtgggcgcctgtaatcccagctacttggtagactgaggcaggagaatcgcttgagcccaggaggcagaggttg-cagtggaccgagatcgcaccactgcac-tccagcctgggccacagagcgaaactccatctcaaaacaaaac-aaaacttgtgtgaca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29197949 557 + 50890351 gttcaagacaaacctggccaacatagcgagacccacctctctCTTTAAACTTAACCATATTATATGATAAtgatatggtttggatctgtgttcccacccaaatctcatgctgagttgaaatccccaatgttggaagtggggcctggtggaaggtgattagatcatgggggtgctttctaatggtttagcatcatccccc-agtgctgctctcatgatagagttctcacgagctctccacgactgttgaaaagtgtgtgagaggtggctcctgcctgtcatcccagcactttggaaggctgaggcgggtggatcacttgg-ggtcaggagtttgagactagcctgggtaacaaggtgaaaccccatcactactaaaaataccaaaattagctggacttggtggtaagtgcctgtaatcccagctactcggcagactgaggcaggagaattgcttgagctcaggaggcagaggttg-cagtgaactgagatcgcaccactgcac-tccagcctgggccacagagcgaaactccatctcaaaacaaaac-aaaacttgtgtgaca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 811342 557 - 2385121 gttcaagaccaacctggccaacatagcgagacccacctctctCTTTATACTTAATCATATTATATGATAAtgatatggtttgaatctgtgttcccacccaaatctcatgccgagttgaaatccccaatgttggaagtggggcctggtgggaggtgatcagatcatgggggtgctttctaatggtttagcatcatccccc-agtgctgctctcatgatagagttctcacgagctctccatggctgttgaaaagtgtgtgagaggtggctcctgcctgtcatcccagcactttgggaggctgaggcgggtggatcacttgg-ggtcaggagtttgagactagcctgggtaacaaggtgaaaccccatctctactaaaaataccaaaattagctggacgtggtggtgggcgcctgtaatcccagctactcggcagactgaggcaggagaatcgcttgagcccaggaggcagagattg-caatgaactgagatcgcaccactgcac-tccagcctgggccacagagcgaaactccatctcaaaacaaaac-aaaacttgtgtgaca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2256549 555 + 4274983 gttcaagaccaacctggccaacatagcgagacccacctctctaTTTATACTTAATCATATTATATGATAAtgatacggtttggatctgtgttcccacccaaatctcatgctgagttgaaatccccaatgttggaagtggggcctggtgagagatgatcagatcatgggggtgctttctaatggtttagcatcatctccc-agtgctgctctcatgatagagttctcacgagctctccatggctgttgaaaagtgtgtgagaggtggctgctgcctgtcatcccagcactttgggaggccgaggcaggtggatcactcgg-ggtcaggagtttgagactagcctgggtaacaaggtgaaaccccatctctactaaaaata-caaaattagctggacgtggtggtgggcgcctgtaatcccagctactcggcaga-tgaggcaggagaatcgcttgagcccaggaggcagaggttg-cagtgaaccgagatcatgccactgcac-tccagcctgggccacagagcgaaactccatctcaaaacaaaac-aaaacttgtgtgaca i colAng1.NW_012111697v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555282 492 - 122678785 I e aotNan1.NW_018505377v1 296318 628 - 4471408 I e cebCap1.NW_016107633v1 1547020 653 - 2680843 I e saiBol1.JH378197 5332271 598 + 8899380 I e calJac3.chr22 28488546 1064 + 49145316 I a score=1160581.000000 s hg38.chr19_GL383574v1_alt 6976 211 + 155864 cctccccccaccattatttctgctccatccacgtaagacacgcctgcttccccttccccttccatcacagctg-taagttccctgaggcctccccagcca-tgcttcctgtatagcctgc-agaaccatgagccaattaaacctcttttccttataaattacccagcctcaggcatttgtttctagcactgtgagaatgga-ctaatacCGACAA s panTro5.chr19 36065810 211 + 61309027 cctccccccaccattatttctgctccatccacataagacacgcctgcttccccttccccttccaccacagctg-taagttccctgaggcctccccagcta-tgcttcctgtatagcctgc-agaaccatgagccaattaaacctcttttccttataaattacccagcctcaggcatttgtttctagcactgtgagaatgga-ctaatacCGACAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39817995 210 + 64411610 cct-cccccaccattatttctgctccatccacataagacacgcctgcttccccttccccttccaccacagctg-taagttccctgaggcctccccagcta-tgcttcctgtatagcctgc-agaaccatgagccaattaaacctcttttccttataaattacccagcctcaggcatttgtttctagcactgtgagaatgga-ctaatacCGACAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6235532 210 - 8369475 cct-cccccaccattatttctgctccatccacataagacacgcctgcttccccttccccttccaccacagctg-taagttccctgaggcctccccagcca-tgcttcctgtatagcctgc-agaaccatgagccaattaaacctcttttccttataaattacccagcctcaggcatttgtttctagcactgtgagaatgga-ctaatacCGACAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63832395 211 - 106955855 cctccccccaccattatttcagctccatccatataagacatgcctgcttccccttcccctcccaccacagctg-taagttccctgaggcctccccagcca-tgcttcctgtatagcctgc-agaaccatgagccaattaaacctcttttccttataaattacccagcctcaggcatttgtttctagcactgtgagaacaga-ctaataTCAATAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30138630 212 + 53671032 tctctccccaccactatttctgctccatccacataagacgtgcctgcttccccttcccctcccaccacagctgttaagttccctgaggcctccccagcca-tgcttcctgtatagcctgc-agaaccatgagccaattaaaactcttttccttatcaattatcaagtctcaggcatttatttgtagctttgtgagaacgga-ctaatacCGATAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34590917 212 + 59248254 tctctccccaccactatttctgctccatccacataagacgtgcctgcttccccttcccctcccaccacagctgttaagttccctgaggcctccccagcca-tgcttcctgtatagcctgc-agaaccatgagccaattaaaactcttttccttatcaattatcaagtctcaggcatttatttgtagctttgtgagaacgga-ctaatacCGATAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4459814 213 - 13342542 cttctccccaccactatttctgctccatccacataagacgtgcctgcttccc--ttcccctccaccacagctgttaagttccctgaggcctccccagccactgcttcctgtatagcctgcaagaaccatgagccaattaaaactcttttccttatcaattatcaagtctcaggcatttatttgtagctttgtgagaacggagctaatacCGATAA i macNem1.NW_012011689v1 I 4383 C 0 s cerAty1.NW_012005268v1 5390600 212 + 7714307 tctctccccaccactatttctgctccatccacataagacgtgcctgcttccccttcccctcccgccacagctgttaagttccctgaggcctccccagcca-tgcttcctgtatagcctgc-agaaccatgagccaattaaaactcttttccttatcaattatcaagtctcaggcatttattcgtagctttgtgagaaggga-ctaatacCGATAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29198506 212 + 50890351 tctctccccaccattatttctgctccatccacataagacgtgcctacttccccttcccctcccgccacagctgttaagttccctgaggcctccccagcca-tgcttcctgtatagcctgc-agaaccatgagccaattaaaactcttttccttatcaattatcaagtctcaggcatttatttgtagctttgtgagaacgga-ctgatacCGATAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 811899 212 - 2385121 tctctccccaccactatttctgctccatccacataagacgtgcctgcttccccttcccctcccaccacagctgttaagttccctgaggcctccccagcca-cgcttcctgtatagcctgc-agaaccatgagccaattaaaactcttttccttatcaattatcaagtctcaggcatttattcgtggctttgtgagaacgga-ctaatacCGATAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2257104 212 + 4274983 tctctccccgccattatttctgctccatccacataagacgtgcctgcttccccttcccctcccgccacagctgttaagttccctgaggcctccccagcca-tgcttcctgtatagcctgc-agaaccatgagccaattaaaactcttttccttatcaattatccagtctcaggcatttatttctagctttgtgagaacgga-ctaatacCGATAA i colAng1.NW_012111697v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555282 492 - 122678785 I e aotNan1.NW_018505377v1 296318 628 - 4471408 I e cebCap1.NW_016107633v1 1547020 653 - 2680843 I e saiBol1.JH378197 5332271 598 + 8899380 I e calJac3.chr22 28488546 1064 + 49145316 I a score=50532.000000 s hg38.chr19_GL383574v1_alt 7187 8 + 155864 TATAAAAA s panTro5.chr19 36066021 8 + 61309027 TATAAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39818205 8 + 64411610 TATAAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6235742 8 - 8369475 TATAAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63832606 8 - 106955855 TATAAAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30138842 8 + 53671032 TATAAAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34591129 8 + 59248254 TATAAAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4460027 8 - 13342542 TATAAAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5390812 8 + 7714307 TATAAAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29198718 8 + 50890351 TATAAAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 812111 8 - 2385121 TATAAAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2257316 8 + 4274983 TATAAAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28489610 7 + 49145316 TATAAAA- i calJac3.chr22 I 1064 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555282 492 - 122678785 I e aotNan1.NW_018505377v1 296318 628 - 4471408 I e cebCap1.NW_016107633v1 1547020 653 - 2680843 I e saiBol1.JH378197 5332271 598 + 8899380 I a score=170811.000000 s hg38.chr19_GL383574v1_alt 7195 30 + 155864 ATATTTTTAggccgggagtggtggctcaag s panTro5.chr19 36066029 30 + 61309027 ATATTTTTAggccgggagtggtggctcaag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39818213 30 + 64411610 ATATTTTTAggccgagagtggtggctcaag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6235750 30 - 8369475 ATATTTTTAggctgggagtggtggctcaag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63832614 30 - 106955855 ATATTATTAggccgggagtggtggctcaag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30138850 30 + 53671032 ATATTAGTAggccaggtgtggtggctcaag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34591137 30 + 59248254 ATATTAGTAggccaggtgtggtggctcaag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4460035 30 - 13342542 ATATTAGTAggccaggtgtgtggcttcaag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5390820 30 + 7714307 ATATTAGTAggccaggtgtggtggctcaag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29198726 30 + 50890351 ATATTAGTAggccaggtgtggtggctcaag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 812119 30 - 2385121 ATATTAGTAggccaggtgtggtgactcaag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2257324 30 + 4274983 GTATTATTAggccagatgtggtggctcaag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28489617 24 + 49145316 ------TTAgaccagacatggtggcttact i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5332869 30 + 8899380 atataATTAGACAAgacatggtggcttact i saiBol1.JH378197 I 598 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555282 492 - 122678785 I e aotNan1.NW_018505377v1 296318 628 - 4471408 I e cebCap1.NW_016107633v1 1547020 653 - 2680843 I a score=1180112.000000 s hg38.chr19_GL383574v1_alt 7225 120 + 155864 cctgtaatcccagcactttgagagggtgaggcaagccgatcacctgaggtcgggagttcaagaccagcctggccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagctgg s panTro5.chr19 36066059 120 + 61309027 cctgtaatcccagcactttgagagggtgaggcaagccaatcgcctgaggtcgggagttcaagaccagcctggccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagccgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39818243 120 + 64411610 cctgtaatcccagcactttgagagggtgaggcaagccgatcgcctgaggtcgggagttcaagaccagcctggccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagccgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6235780 120 - 8369475 cctgtaatcccagcactttgagagggtgaggcaagccgatcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtgtctactaaaaatacaaaaactagccgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63832644 120 - 106955855 cctgtaatcccaacactttgagaggctgaggcaagccgatcacctgaggtcgggagttcatgaccagcctggccaacatggtgaaaccctgtgtctactaaaaatgcaaaaattagctgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30138880 120 + 53671032 ccggtaatcccagcactttgagaggctgaggcaagccaatcacctgaggtcgggagttcaagaccagcctggccaacaaggtgaaaccctgtgtctactaaaaatacaaaaattagtcgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34591167 120 + 59248254 cctgtaatcccagcactttgagaggctgaggcaagccaatcacctgaggtcaggagttcaagaccagcctggccaacaaggtgaaaccctgtgtctactaaaaatacaaaaattagtcgg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4460065 119 - 13342542 ccggtaatcccagcactttgagaggctgagacaagccaatcacctgaggtc-ggagttcaagaccagcctggccaacaaggtgaaaccctgtgtctactaaaaatacaaaaattagtcgg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5390850 120 + 7714307 ccggtaatcccagcactttgagaggctgaggcaagccaatcacctgaggtcgggagttcaagaccagcctggccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagtcgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29198756 120 + 50890351 ccggtaatcccagcactttgagaggctgaggcaagccaatgacctgaggtcgggagttcaagaccagcctggccaacatggtgaaatcctgtgtctactaaaaatacaaaaatgagtcgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 812149 120 - 2385121 ccggtaatcccagcactttgagaggctgaggcaagccaatcacctgaggtcgggagttcaagaccagcctggccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagtcgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2257354 120 + 4274983 ccggtaatcccagcactttgagaggctgaggcaagccaatcacctgaggtcgggagttcaagaccagcctggccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagtcgg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28489641 120 + 49145316 tctgtaatcccagcactttgggagactgaggcagtcagatcatttgagttcaggagtttgagaccagcctggccaacatggcaaaatgctgtgtctactaaaaatacaaaaattagccag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5332899 120 + 8899380 cctgtaatcccagcactttgggaggctgaggcagtcagatcacttgagttcaggagtttgagaccagcctggccaacatggcaaaacgctgtgtctaccaaaaatacaaaaattagacag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1547673 120 - 2680843 cctgtaatcccagcactttgggaggctgaggcagttggatcacttgagttcaggagtttgagaccagcctggccaacatggcaaaaccctgtgtctactaaaaatacaaaaattagccag i cebCap1.NW_016107633v1 I 653 C 0 s aotNan1.NW_018505377v1 296946 120 - 4471408 cctgtaatcccagcactttgggaggctggggcagtcaaatcacttgagttcaggagtttgagaccagtctggccaacatggcaaaacgctgtgtctactaaaaatacaaaaattagccag i aotNan1.NW_018505377v1 I 628 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555282 492 - 122678785 I a score=1761667.000000 s hg38.chr19_GL383574v1_alt 7345 216 + 155864 gtgtggtggtgcacatctgtaatcccagctacttgagaggctggggca-ggagaatcgcttgaacctgggaggcagaggttgcagtgagccgagattgcaccactgcattccagcctgggtgacaaagcaagaatccatctcaaaataaataaacaaa---TATTATTAAGTT-AAGGCTTGGAGGGAGTAGAGAGACAGAAGCGGGGAAGGTAAACGGGA s panTro5.chr19 36066179 216 + 61309027 gtgtggtggtgcacatctgtaatcccagctacttgagaggctggggca-ggagaatcgcttgaacctgggaggcagaggttgcagtgagccgagattgcaccactgcattccagcctgggtgacaaagcaagaatccgtctcaaaataaataaacaaa---TATTATTAAGTT-AAGGCTTGGAGGGAGTAGAGAGACAGAAGTGGGGAAGGTAAACGGGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39818363 216 + 64411610 gtgtggtggtgcacatctgtaatcccagctacttgagaggctggggca-ggagaatcgcttgaacctgggaggcagaggttgcagtgagccgagattgcaccactgcattccagcctgggtgacaaagcaagaatccgtctcaaaataaataaacaaa---TATTATTAAGTT-AAGGCTTGGAGGGAGTAGAGAGACAGAAGTGGGGAAGGTAAACGGGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6235900 216 - 8369475 gtgtggtggtgcacatctgtaatcccagctacttgagaggctggggca-ggagaatcgcttgaacctgggaggcagaggttgcagtgagtcgagattgcaccactgcattccagcctgggtgacagagcaagactccgtctcaaaataaataaataaa---TATTATTAAGTT-AAGGCTTGGAGGGACTAGAGAGACAGAAGCGGGGAAGGTAAACGGGA i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30139000 212 + 53671032 gtgtggtggcacacatctgtaatcccagctacttgggaggctggggca-ggagaatcgcttgaacctgggaggcagaggttgcagcaggctgagattgcaccactgcactccagcctgggtgacagagcaagactccgtctctaaataaataaataaa-------aTTAAGTT-AAGGCTTGGTGGGAGTAGAGAGACACAATGGGGGAAGGTAAAGGCGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34591287 212 + 59248254 gtgtggtggcacacatctgtaatcccagctacttgggaggctggggca-ggagaatcgcttgaacctgggaggcagaggttgcagcaggctgagattgcaccactgcactccagcctgggtgacagagcaagactccgtctctaaataaataaataaa-------aTTAAGTT-AAGGCTTGGTGGGAGTAGAGAGACACAATGGGGGAAGGTAAAGGCGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4460184 212 - 13342542 gtgtggtggca-acatctgtaatcccagctactt-ggaggctggggcagggagaatcgcttgaacctgggaggcagaggttgcagcgagctgagattgcaccactgcactccagcctgggtgacagagcaagactccgtctctaaataaataaataaa-------aTTAAGTTAAAGGCTTGGTGGGAGTAGAGAGACACAATGGGGGAAGGTAAAGGCGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5390970 212 + 7714307 gtgtggtggcacacatctgtaatcccagctacttgggaggctggggca-ggagaatcgcttgaacctgggaggcagaggttgcagtgagctgagattgcaccactgcactccagcctgggtgacagagcaagactccgtctctaaataaataaataaa-------aTTAAGTT-AAGGCTTGGGGGGAGTAGAGAGACACAATGGGGGAAGGTAAAGGCGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29198876 212 + 50890351 gtgtggtggcacacatctgtaatcccagctacttgggaggctggggca-ggagaatcgcttgaacctggaaggcagaggttgcagcgagctgagattgcatcactgcactccagcctgggtgacagagcaagactccgtctctaaataaataaataaa-------aTTAAGTT-AAGGCTTGGGGGGAGTAGAGAGACACAATAGGGGAAGGTAAAGGCGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 812269 212 - 2385121 gtgtggtggcacacatctgtaatcccagctacttgggaggctggggca-ggagaatcgcttgaacctgggaggcagaggttgcagcgagctgagattgcaccactgcactccagcctgggtgacagagcaagactccgtctctaaataaataaataaa-------aTTAAGTT-AAGGCTTGGGGGGAGTAGAGAGACACAATGAGGGAAGGTAAAGGCGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2257474 211 + 4274983 gtgtggtggcacacatctgtaatcccagctacttgggaggctggggca-ggagaatcacttgaacctgggaggcagaggttgcagcgagctgagattgcaccactgcattccagcctgggtgacagagcaagactctgtctctaaataaataaataaa-------aTTAAGTT-AAGGCTTGGGGGGAGTAGAGAGACACAATGGGGGAA-GTAAAGGAGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28489761 219 + 49145316 gtatggtggtgcatgtctgtaattccagctatgtgggaggctggggca-ggagaatcgcttgaacctgagaggcagaggttgcagtgagccaagactgtgccactgcactccagcctgagtgacagagcaagatcacatctcaaaataaataaataaaCATTATTATTAAGTT-AAGGCTTAGCGGGAGTAGAGAGAGAGAATAGGGGAAGGTAAAGGGGA i calJac3.chr22 C 0 I 358 s saiBol1.JH378197 5333019 219 + 8899380 gtgtggtggtgcatgtctgtaattccagctatgtgggaggctggggca-ggagaatctcttgaaactgagaggcagaggttgcagtgagccaagactgtgccactgcactccagcctgagtgacaggacaagatcacatctcaaaataaataaataaaTATTATTATTAAGTT-AAGGCTTAGGGGGAGTAGAGAGAGAGAATGGGGGAAGGTAAAGGAGA i saiBol1.JH378197 C 0 I 53 s cebCap1.NW_016107633v1 1547793 219 - 2680843 gtgtggtagtgcatgtctgtaattccagctatgtgggaggctggggca-ggagaatcgcttgaacccgagaggcagaggttgcagtgagccaagactgtgccactgcactccagtctgagtgacagagcaagatcacatctcaaaataaataaataaaTATTATTATTAAGTT-AAGGCTTACAGGGAGTAGAGAGAGAGAATGGGGGAAGATAAAGGGGA i cebCap1.NW_016107633v1 C 0 I 56 s aotNan1.NW_018505377v1 297066 218 - 4471408 gagtggtgatgcatgtctgtaattccagctatgtgggaggctggggca-ggagaatcgcttgaacctgagaggcagaggttgcagtgagccaagactgtgccactgcactccagcctgagtgacagagcaagatcacatctcaaaataaataaataaaTATTATTATTAAG-T-AAGGCTTAGGGGGAGTAGAGAGAGAAAATGGGGGAAGGTAAAGAGGA i aotNan1.NW_018505377v1 C 0 I 55 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555282 492 - 122678785 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=48776.000000 s hg38.chr19_GL383574v1_alt 7561 5 + 155864 GAGAC s panTro5.chr19 36066395 5 + 61309027 GAGAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39818579 5 + 64411610 GAGAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236116 5 - 8369475 GAGAC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30139212 5 + 53671032 GAGAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34591499 5 + 59248254 GAGAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4460396 5 - 13342542 GAGAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5391182 5 + 7714307 GAGAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29199088 5 + 50890351 GAGAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 812481 5 - 2385121 GAGAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2257685 5 + 4274983 GAGAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28490338 5 + 49145316 GAGAC i calJac3.chr22 I 358 C 0 s saiBol1.JH378197 5333291 5 + 8899380 GAGAC i saiBol1.JH378197 I 53 C 0 s cebCap1.NW_016107633v1 1548068 5 - 2680843 GAGAC i cebCap1.NW_016107633v1 I 56 C 0 s aotNan1.NW_018505377v1 297339 5 - 4471408 GAGAC i aotNan1.NW_018505377v1 I 55 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555282 492 - 122678785 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=378211.000000 s hg38.chr19_GL383574v1_alt 7566 40 + 155864 AAAAGGCGAGACCAGAGATTTAAGCAAGTGCCAACTCACA s panTro5.chr19 36066400 40 + 61309027 AAAAGGCGAGATCAGAGATTTAAGCAAGTGCCAACTCACA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39818584 40 + 64411610 AAAAGGCGAGATCAGAGATTTAAGCAAGTGCCAACTCACA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236121 40 - 8369475 AAAAGGCGAGACCAGACATTTAAGCAAGTGCCAACTCACA i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30139217 40 + 53671032 AAAAGGTGAGACCAGAGATTTAAGCAAGTGCCAACTCACA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34591504 40 + 59248254 AAAAGGTGAGACCAGAGATTTAAGCAAGTGCCAACTCACA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4460401 40 - 13342542 AAAAGGTGAGACCAGAGAGTTTAAGAAGTGCCAACCCACA i macNem1.NW_012011689v1 C 0 I 374 s cerAty1.NW_012005268v1 5391187 40 + 7714307 AAAAGGTGAGACCAGAGATTTAAGCAAGTGCCAACTCACA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29199093 40 + 50890351 AAAAGGTGAGACCAGAGATTTAAGCAAGTGCCAACTCACG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 812486 40 - 2385121 AAAAGGTGAGACCAGAGATTTAAGCAAGTGCCAACTCACA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2257690 40 + 4274983 AAAAGGTGAGACCAAAGATTCAAGCAAGTGCCAACTCACA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28490343 40 + 49145316 AAGAGGTGAGACCAGAGGTTTAAGCAAGGGCCAACTCACA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5333296 40 + 8899380 AAGAGGTGAGACCAGAGATTTAAGCAAGGGCCAACTCACA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1548073 40 - 2680843 AAGAGGTGAGACCAGACATTTAAGCAAGGGCCAACTCACA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 297344 40 - 4471408 AAGAGGTGAGACCAGAGATTTAAGCAAGGGCCAACTCACA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4555774 40 - 122678785 AAGAGGTAAGACAGGAGAATAAAGCAGGAGACAGTTCACA i canFam3.chr1 I 492 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=298388.000000 s hg38.chr19_GL383574v1_alt 7606 43 + 155864 CAGGATTTTGTAAACAACATAACCCAGGATATTCCAAGAGAAA s panTro5.chr19 36066440 43 + 61309027 CAGGATTTTGTAAACAACATAACCCAGGATATTCCAAGAGAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39818624 43 + 64411610 CAGGATTTTGTAAACAACATAACCCAGGATATTCCAAGAGAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236161 43 - 8369475 CAGAATTTTGTAAACAACATAACCCAGGATATTCCAAGAGAAA i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30139257 43 + 53671032 CAGGCTTTTATAAACAACATAACCAAGGATATTCTAAGAGAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34591544 43 + 59248254 CAGGCTTTTATAAACAACATAACCAAGGATATTCTAAGAGAAC i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5391227 43 + 7714307 CAGGATTTTGTAAACAACATAACCAAGGATATTCTAAGAGAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29199133 43 + 50890351 CAGGATTTTGTAAACAACATAACCAAGGATATTCTAAGAGAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 812526 43 - 2385121 CAGGATTTTGTAAACAACATAACCAAGGATATTCTAAGAGAAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2257730 43 + 4274983 CAGGATTTTGTAAACAACATAACCAAGGATATTCTAAGAGAAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28490383 40 + 49145316 CAGGATTTCAT---CAACATAACCCAGGTTATTCTAAGAGAAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5333336 40 + 8899380 TAGGATTTCGT---CAACATAACCCAGGTTATTCTAAGAGAAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1548113 37 - 2680843 CAGGATT---T---CAACATAACCCAGGTTATTCTAAGAGAAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 297384 40 - 4471408 CAGGATTTTGT---CAACACAATCCAGGTTATTCTAAGAGAAT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4555814 43 - 122678785 CAGGGTTTTGTAAACAATAGACCCTAGGTTATTTTAAGGTCAT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e macNem1.NW_012011689v1 4460441 374 - 13342542 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=400737.000000 s hg38.chr19_GL383574v1_alt 7649 47 + 155864 AGAGCAAGGAGAAGCTATTAAAGCCATTGAAGGCTTTGGGG-A-TGG-GG s panTro5.chr19 36066483 47 + 61309027 AGAGCAAGGAGAAGCTATTAAAGCCATTGAAGGCTTTGGGG-A-TGG-GG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39818667 47 + 64411610 AGAGCAAGGAGAAGCTATTAAAGCCATTGAAGGCTTTGGGG-A-TGG-GG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236204 48 - 8369475 AGAGCAAGGAGAAGCTGTTAAAGCCATTGAAGGCTTTGGGG-A-TGGAGG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30139300 47 + 53671032 AGAGCAAGGAGAAGCTATTAAAGCCACTGATGTCTCTGGGG-A-TGG-GG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34591587 47 + 59248254 AGAGCAAGGAGAAGCTATTAAAGCCACTGATGTCTCTGGGG-A-TGG-GG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4460815 47 - 13342542 AGAGCAAGGAGAAGCTATTAAAG-CATTGATGTCTCTGGAGCA-TGG-GG i macNem1.NW_012011689v1 I 374 C 0 s cerAty1.NW_012005268v1 5391270 47 + 7714307 AGAGCAAGGAGAAGCTATTAAAGCCATTGATGTCTTTGGGG-A-TGG-GG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29199176 47 + 50890351 AGAGCAAGGAGAAGCTATTAAAGCCCTTGATGTCTTTGGGG-A-TGG-GG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 812569 47 - 2385121 AGAGCAAGGAGAAGCTATTAAAGCCATTGATGTCTTCGGGG-A-TGG-GG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2257773 47 + 4274983 AGAGCAAGGAGAAGCTATTAAAGCCATTGATGTCTTTGGGG-A-TGG-GG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28490423 48 + 49145316 AGAACAAGGAGAAGCTATTAAAGCCATTGAAGACTTTGGGG-ATTGG-AG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5333376 48 + 8899380 AGAGCAAGGAGAAGCTACTAAAGCCATTGAAGGCTTTGGGG-ACTGG-GG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1548150 48 - 2680843 AGAGCAAGGTGACGCTATTAAAGCCATTGAAGGCTTTGGGG-ATTGG-GG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 297424 48 - 4471408 AGAGCAAGGAGAAGCTATTAAAGCCATTGAAGGCTTTGGGG-ATTGG-GG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4555857 38 - 122678785 AGAGCCATGAGGAGC---------CATTGAAGGTTTTTGGG-G-TAG-GG i canFam3.chr1 C 0 I 1 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=1166305.000000 s hg38.chr19_GL383574v1_alt 7696 149 + 155864 GGAAGTACAACAGActga---atgtttatgttcccctaaaattcataaattgaaatcttagccctcaaggggatggtattgggaagtggggcctttagaaggtgac--taggtcatgagggtcaagcc-ctcatggataaaattagtgcctttag s panTro5.chr19 36066530 149 + 61309027 GGAAGTACAACAGActga---atgtttatgtttccctaaaattcataaattgaaatcttagccctcaaggggatggtattgggaagtggggcctttagaaggtgat--taggtcatgagggtcaagcc-ctcatggataaaattagtgcctttag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39818714 149 + 64411610 GGAAGTACAACAGActga---atgtttatgtttccctaaaattcataaattgaaatcttagccctcaaggggatggtatcgggaagtggggcctttagaaggtgat--taggtcatgagggtcaagcc-ctcatggataaaattagtgcctttag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236252 148 - 8369475 GGAAGTACAACAGActga---atgtttatgtt-ccctaaaattcataaattgaaatcttagccctcaaggggatggtattgggaagtggggcctttagaaggtgat--taggtcatgagggtcaagcc-ctcatagataaaattagtgcctttag i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30139347 143 + 53671032 GGAAGTACAatagactga---atgtttatgttcccctaaaattcataagttaaaaccttagccctcaaggggatggtatttggaagtagggccttta------gat--taggtcgtgagggtcaagcc-ctcatggataaaattagtgcctttaG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34591634 143 + 59248254 GGAAGTACAatagactga---atgtttatgttcccctaaaattcataagttaaaaccttagccctcaaggggatggtatttggaagtagggccttta------gat--taggtcgtgagggtcaagcc-ctcatggataaaattagtgcctttaG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4460862 149 - 13342542 GAAGTTACAatagactgacatatgtttactgttccctaaatttcataagttaaaaccttagccctccaaggggatgtatttggaagtaggggcttta------gatgctaggtcgtgagggtcaagcctcgaatggataaaattagtgcctttaG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5391317 143 + 7714307 GGAAGTACAatggactga---atgtttatgttcccctaaaattcataagttgaaatcttagccctcaaggggatggtatttggaagtagggccttta------gat--taggtcgtgagggtcaagcc-ctcatggacaaaattagtgcctttaG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29199223 143 + 50890351 GGAAGTACAatagactga---atgtttatgttcccctaaaattcataagttgaaatcttagccctcaaggggatggtatttggaagtagggccttta------gat--taggtcatgagggtcaagcc-ctcatgaacaaaattagtgcctttag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 812616 143 - 2385121 GGAAGTACAatagactga---atgtttatgttcccctaaaattcgtaagttgaaatcttagccctcaaggggatggtatttggaagtagggccttta------gat--taggtcgtgagggtcaagcc-ctcatggacaaaattagtgcctttag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2257820 142 + 4274983 G-AAGTAAAatagactga---atgtttatgttcccctaaaattcataagttgaaatcttagccctcaaggggatggtatttggaagtagggccttta------gat--taggtcgtgagggtcaagcc-ctcatggataaaattagtgcctttag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28490471 149 + 49145316 GGAAGTACAatagactga---atgtttatgttacactcaaattcatatgttgaaatcttagcccccaaaaggatggccttgggaagttgggcctttagaaggtgat--taggtcataagggttaagcc-ctcatggatgagattagcgcctttag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5333424 149 + 8899380 GGAAGTACAACCGActga---atgtttatgttaccctaaaattcatatgttgaaatcttagcccccaaagggatggctttgggaagttgagcctttagaaggtgat--taggtcataagggtcaagcc-ctcatggatgagattagcgcctttag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1548198 148 - 2680843 GGAAGCACAataggctga---atgtttatgttaccctaaaattcatatgttgaaatcttag-ccccagagggatggcattgggaagttgggcctttagaaagtgat--taggtcataagggtcaagcc-ctcatggatgagattagcgcctttag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 297472 149 - 4471408 GGAAGTACAatagactga---atatttatgttaccctaaaattcatatgttgaaatcttagcccccaaagggatggcattgggaagttgggcttttagaaggtgat--taggtcataagggtcaagcc-ttcatggatgaaattagcgcctttag i aotNan1.NW_018505377v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555895 1 - 122678785 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=5500.000000 s hg38.chr19_GL383574v1_alt 7845 1 + 155864 g s panTro5.chr19 36066679 1 + 61309027 g i panTro5.chr19 C 0 C 0 s panPan2.chr19 39818863 1 + 64411610 g i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236400 1 - 8369475 g i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30139490 1 + 53671032 g i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34591777 1 + 59248254 g i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4461011 1 - 13342542 G i macNem1.NW_012011689v1 C 0 I 463 s cerAty1.NW_012005268v1 5391460 1 + 7714307 g i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29199366 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 812759 1 - 2385121 g i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2257962 1 + 4274983 g i colAng1.NW_012111697v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555895 1 - 122678785 I e aotNan1.NW_018505377v1 297621 0 - 4471408 C e cebCap1.NW_016107633v1 1548346 0 - 2680843 C e saiBol1.JH378197 5333573 0 + 8899380 C e calJac3.chr22 28490620 0 + 49145316 C e nomLeu3.chr10 63832764 0 - 106955855 C a score=137469.000000 s hg38.chr19_GL383574v1_alt 7846 40 + 155864 gtcgggcgc-tgtggctcatgactgtaatcccagcactttg s panTro5.chr19 36066680 40 + 61309027 gtcgggcgc-tgtggctcatgactgtaatcccagcactttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39818864 40 + 64411610 gtcgggcgc-tgtggctcatgactgtaatcccagcactttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236401 40 - 8369475 gtcgggcgc-tgtggctaatgactgtaatcccagcactttg i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30139491 40 + 53671032 gttgggtat-ggtggctcatgcctgtaatcccagcactttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34591778 40 + 59248254 gttgggtat-ggtggctcatgcctgtaatcccagcactttg i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5391461 40 + 7714307 gtcgggtat-ggtggctaacgcctgtaatcccagcactttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29199367 40 + 50890351 gtcgggtat-ggtggctcacacctgtaatcccagcactttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 812760 40 - 2385121 gtcgggtat-ggtggctcacacctgtaatcccagcactttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2257963 41 + 4274983 gttgggtatgggtagctcacgcctgtaatcccagcactttg i colAng1.NW_012111697v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555895 1 - 122678785 I e aotNan1.NW_018505377v1 297621 0 - 4471408 C e cebCap1.NW_016107633v1 1548346 0 - 2680843 C e saiBol1.JH378197 5333573 0 + 8899380 C e calJac3.chr22 28490620 0 + 49145316 C e macNem1.NW_012011689v1 4461012 463 - 13342542 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=3600.000000 s hg38.chr19_GL383574v1_alt 7886 1 + 155864 g s panTro5.chr19 36066720 1 + 61309027 g i panTro5.chr19 C 0 C 0 s panPan2.chr19 39818904 1 + 64411610 g i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236441 1 - 8369475 g i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30139531 1 + 53671032 g i rheMac8.chr19 C 0 I 155 s cerAty1.NW_012005268v1 5391501 1 + 7714307 g i cerAty1.NW_012005268v1 C 0 I 92 s chlSab2.chr6 29199407 1 + 50890351 g i chlSab2.chr6 C 0 I 94 s manLeu1.NW_012102454v1 812800 1 - 2385121 g i manLeu1.NW_012102454v1 C 0 I 86 s colAng1.NW_012111697v1 2258004 1 + 4274983 g i colAng1.NW_012111697v1 C 0 I 1 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555895 1 - 122678785 I e aotNan1.NW_018505377v1 297621 0 - 4471408 C e cebCap1.NW_016107633v1 1548346 0 - 2680843 C e saiBol1.JH378197 5333573 0 + 8899380 C e calJac3.chr22 28490620 0 + 49145316 C e macNem1.NW_012011689v1 4461012 463 - 13342542 I e macFas5.chr19 34591818 0 + 59248254 C e nomLeu3.chr10 63832764 0 - 106955855 C a score=103749.000000 s hg38.chr19_GL383574v1_alt 7887 185 + 155864 gaggcctaggcaggcggatcacctgagatcgggcattcaagaccagcctgaccaacatggacaaaccccatctctactaaaaatacaaaattagccaggtgtgatggcgcatgcctgtaatcccagctattgaagaggctgaggcaggagactcgcttgaacccgggaggcggaggttgcggtga s panTro5.chr19 36066721 185 + 61309027 gaggcctaggcaggcggatcacctgagatcgggcattcgagaccagcctgaccaacatggacaaaccccatctctactaaaaatacaaaattagccaggtgtgatggcgcatgcctgtaatcccagctattgaagaggctgaggcaggagactcgcttgaacccgggaggcggaggttgcggtga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39818905 185 + 64411610 gaggcctaggcaggcggatcacctgagatcgggcattcgagaccagcctgaccaacatggacaaaccccatctctactaaaaatacaaaattagccaggtgtgatggcgcatgcctgtaatcccagctattgaagaggctgaggcaggagactcgcttgaacccgggaggcggaggttgcggtga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236442 184 - 8369475 gaggcctaggcaggcggatcacctgagatcgggcatt-gagaccagcctgaccaacatggacaaaccccatctctactaaaaatacaaaattagccaggtgtgatggcgcatgcctgtaatcccagctattgaagaggctgaggcagaagactcgcttgaacccgggaggcggaggttgcagtga i gorGor5.CYUI01015150v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e chlSab2.chr6 29199408 94 + 50890351 I e canFam3.chr1 4555895 1 - 122678785 I e aotNan1.NW_018505377v1 297621 0 - 4471408 C e cebCap1.NW_016107633v1 1548346 0 - 2680843 C e saiBol1.JH378197 5333573 0 + 8899380 C e calJac3.chr22 28490620 0 + 49145316 C e colAng1.NW_012111697v1 2258005 1 + 4274983 I e manLeu1.NW_012102454v1 812801 86 - 2385121 I e cerAty1.NW_012005268v1 5391502 92 + 7714307 I e macNem1.NW_012011689v1 4461012 463 - 13342542 I e macFas5.chr19 34591818 0 + 59248254 C e rheMac8.chr19 30139532 155 + 53671032 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=1476.000000 s hg38.chr19_GL383574v1_alt 8072 2 + 155864 gt s panTro5.chr19 36066906 2 + 61309027 gc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39819090 2 + 64411610 gc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236626 2 - 8369475 gc i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34591818 2 + 59248254 gc i macFas5.chr19 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e chlSab2.chr6 29199408 94 + 50890351 I e canFam3.chr1 4555895 1 - 122678785 I e aotNan1.NW_018505377v1 297621 0 - 4471408 C e cebCap1.NW_016107633v1 1548346 0 - 2680843 C e saiBol1.JH378197 5333573 0 + 8899380 C e calJac3.chr22 28490620 0 + 49145316 C e colAng1.NW_012111697v1 2258005 1 + 4274983 I e manLeu1.NW_012102454v1 812801 86 - 2385121 I e cerAty1.NW_012005268v1 5391502 92 + 7714307 I e macNem1.NW_012011689v1 4461012 463 - 13342542 I e rheMac8.chr19 30139532 155 + 53671032 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=51401.000000 s hg38.chr19_GL383574v1_alt 8074 68 + 155864 caagatcgtaccattgcactccagcctgggcaacaagagtgaaactccgtttc--aaaaa--------------------aaaaaaaatt s panTro5.chr19 36066908 68 + 61309027 caagatcgtaccattgcactccagcctgggcaacaagagtaaaactccgtttc--aaaaa--------------------aaaaaaaatt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39819092 62 + 64411610 caagatcgtaccattgcactccagcctgggc----------------------------annnnnnnnnnnnnnnnnnnnaanaaaaaat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236628 70 - 8369475 caagatcgtaccattgcactccagcctgggcaacaagagtgaaactccgtttcaaaaaaa--------------------aaaaaaaatt i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34591820 66 + 59248254 caagatcataccattgcactccagtctgggcaacaagagtgaaact--gtctc--caaaa--------------------aataacaaaa i macFas5.chr19 C 0 I 47 s colAng1.NW_012111697v1 2258006 64 + 4274983 caagatcataccattgcactccagcctgggcaac--gagtgaaact--gtctc--aaaaa--------------------aaaaaaaTAT i colAng1.NW_012111697v1 I 1 I 9 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e chlSab2.chr6 29199408 94 + 50890351 I e canFam3.chr1 4555895 1 - 122678785 I e aotNan1.NW_018505377v1 297621 0 - 4471408 C e cebCap1.NW_016107633v1 1548346 0 - 2680843 C e saiBol1.JH378197 5333573 0 + 8899380 C e calJac3.chr22 28490620 0 + 49145316 C e manLeu1.NW_012102454v1 812801 86 - 2385121 I e cerAty1.NW_012005268v1 5391502 92 + 7714307 I e macNem1.NW_012011689v1 4461012 463 - 13342542 I e rheMac8.chr19 30139532 155 + 53671032 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=1911.000000 s hg38.chr19_GL383574v1_alt 8142 1 + 155864 t s panTro5.chr19 36066976 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39819154 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236698 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34591933 1 + 59248254 t i macFas5.chr19 I 47 C 0 s cerAty1.NW_012005268v1 5391594 1 + 7714307 t i cerAty1.NW_012005268v1 I 92 C 0 s colAng1.NW_012111697v1 2258079 1 + 4274983 t i colAng1.NW_012111697v1 I 9 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e chlSab2.chr6 29199408 94 + 50890351 I e canFam3.chr1 4555895 1 - 122678785 I e aotNan1.NW_018505377v1 297621 0 - 4471408 C e cebCap1.NW_016107633v1 1548346 0 - 2680843 C e saiBol1.JH378197 5333573 0 + 8899380 C e calJac3.chr22 28490620 0 + 49145316 C e manLeu1.NW_012102454v1 812801 86 - 2385121 I e macNem1.NW_012011689v1 4461012 463 - 13342542 I e rheMac8.chr19 30139532 155 + 53671032 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=3641.000000 s hg38.chr19_GL383574v1_alt 8143 2 + 155864 aa s panTro5.chr19 36066977 2 + 61309027 aa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39819155 2 + 64411610 aa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236699 2 - 8369475 aa i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34591934 2 + 59248254 ag i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5391595 2 + 7714307 aA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29199502 2 + 50890351 AA i chlSab2.chr6 I 94 C 0 s colAng1.NW_012111697v1 2258080 2 + 4274983 ag i colAng1.NW_012111697v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555895 1 - 122678785 I e aotNan1.NW_018505377v1 297621 0 - 4471408 C e cebCap1.NW_016107633v1 1548346 0 - 2680843 C e saiBol1.JH378197 5333573 0 + 8899380 C e calJac3.chr22 28490620 0 + 49145316 C e manLeu1.NW_012102454v1 812801 86 - 2385121 I e macNem1.NW_012011689v1 4461012 463 - 13342542 I e rheMac8.chr19 30139532 155 + 53671032 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=5164.000000 s hg38.chr19_GL383574v1_alt 8145 2 + 155864 tg s panTro5.chr19 36066979 2 + 61309027 tg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39819157 2 + 64411610 tg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236701 2 - 8369475 tg i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34591936 2 + 59248254 ag i macFas5.chr19 C 0 I 36 s cerAty1.NW_012005268v1 5391597 2 + 7714307 TG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29199504 2 + 50890351 Tg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 812887 2 - 2385121 TG i manLeu1.NW_012102454v1 I 86 C 0 s colAng1.NW_012111697v1 2258082 2 + 4274983 tg i colAng1.NW_012111697v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555895 1 - 122678785 I e aotNan1.NW_018505377v1 297621 0 - 4471408 C e cebCap1.NW_016107633v1 1548346 0 - 2680843 C e saiBol1.JH378197 5333573 0 + 8899380 C e calJac3.chr22 28490620 0 + 49145316 C e macNem1.NW_012011689v1 4461012 463 - 13342542 I e rheMac8.chr19 30139532 155 + 53671032 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=26370.000000 s hg38.chr19_GL383574v1_alt 8147 7 + 155864 cctttat s panTro5.chr19 36066981 7 + 61309027 cctttat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39819159 7 + 64411610 cctttat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236703 7 - 8369475 cctttat i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30139687 7 + 53671032 CCTTTAT i rheMac8.chr19 I 155 C 0 s macFas5.chr19 34591974 7 + 59248254 CCTTTAT i macFas5.chr19 I 36 C 0 s cerAty1.NW_012005268v1 5391599 7 + 7714307 CCTTTAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29199506 7 + 50890351 cctttat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 812889 7 - 2385121 CTTTTAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2258084 7 + 4274983 cctttat i colAng1.NW_012111697v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555895 1 - 122678785 I e aotNan1.NW_018505377v1 297621 0 - 4471408 C e cebCap1.NW_016107633v1 1548346 0 - 2680843 C e saiBol1.JH378197 5333573 0 + 8899380 C e calJac3.chr22 28490620 0 + 49145316 C e macNem1.NW_012011689v1 4461012 463 - 13342542 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=1002034.000000 s hg38.chr19_GL383574v1_alt 8154 135 + 155864 aaaagagattctggccaagcatggaggctcacaaatgtaatccctgcactttgggaggccagactgggagaatcacttgagctaaggagtttgagaccaacctgggcaatatggtgaaacactgtctctattaca s panTro5.chr19 36066988 135 + 61309027 aaaagagattctggccaagcatggaggctcacaaatgtaatccctgcactttgggaggccagactgggagaatcacttgagctaaggagtttgagaccaacctgggcaatatggtgaaacactgtctctattaca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39819166 134 + 64411610 aaaagagattctggccaagcatggaggctcacaaatgtaatccctgcactttgggaggccagactgggagaatcacttgagctaaggagtttgagaccaacctgggcaatatggtgaaacactgtctctattac- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236710 135 - 8369475 aaaagagattctggccaagcatggaggctcacaaatgtaatccctgcactttgggaggccagactgggagaatcacttgagctaaggagtttgagaccaacctgggcaatatggtgaaacactgtctctattaca i gorGor5.CYUI01015150v1 C 0 I 1 s rheMac8.chr19 30139694 135 + 53671032 AAAAGAGATTCTggccaagcatggtggctcacaaatgtaattccagcactttgagaggccaagatgggagaatcacttgagccaaggagtctgagaccaacttgggcaatatggtcaaacactgtctctattaca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34591981 135 + 59248254 AAAAGAGATTCTggccaagcatggtggctcacaaatgtaattccagcactttgagaggccaagatgggagaatcacttgagccaaggagtctgagaccaacttgggcaatatggtcaaacactgtctctattaca i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5391606 135 + 7714307 AAAAGAGATTCTggccaagcatggtggctcacaaatgtaatcccagcacttcgagaagccaagatgggagaatcacttgagccaaggagtctgagaccaacttgggcaatatgatcaaatactgtctctattaca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29199513 135 + 50890351 aaaagagattctggccaagcatggtggctcacaaatgtaatcccagtactttgagaagccaagatgggagaatcacttgagccaaggagtctgagaccaacttgggcaatatgatcaaacactgtctctattaca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 812896 135 - 2385121 AAAAGAGATTCTggccaagcatggtgactcacaaatgtaatcccagcactttgagaagccaagatgggagaatcacttgagccaaggagtctgagaccaacttgggcaatatgatcaaacactgtctctattaca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2258091 135 + 4274983 aaaagagattctggccaagcatggtggctcacaaatgtaatcccagcactttgagaagccaagatgagagaatcacttgagccaaggagtctgagaccaacttgggcaatatggtcaaatactgtctctattaca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28490620 135 + 49145316 aaaagagatacttgccaagcatggtggctcacacatgtaatcccagcactttgggaggccaagatgggaggatcacttgagccaaggagtttgagatcaacctgggcaatatggtgaaacactggctctactaaa i calJac3.chr22 C 0 I 12 s saiBol1.JH378197 5333573 135 + 8899380 aaaagagatacttgccaagcatggtggctcacacatgtaatcccagcactttgggaggccaagatgggaggatcacttgagccaaggagtttgagaccaacctaggcaatatggtgaaacactgtctctactaaa i saiBol1.JH378197 C 0 I 22 s cebCap1.NW_016107633v1 1548346 135 - 2680843 aaaagagatatttgccaggcatggtggctcacacatataatcccagcactttgggaggccaagatgggaggatcacttgagccaaggagtttgagaacaacctgggcaatatggtgaaacactggctctactaaa i cebCap1.NW_016107633v1 C 0 I 12 s aotNan1.NW_018505377v1 297621 135 - 4471408 aaaagagataattgccaggcatggtggctcacacatgtaatcccagcactttgggaggccaagatgggaggatcacttgagccaaggagtttgagaccaatctgggcaatatggtgaaacactgtctctacttaa i aotNan1.NW_018505377v1 C 0 I 7 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555895 1 - 122678785 I e macNem1.NW_012011689v1 4461012 463 - 13342542 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=19415.000000 s hg38.chr19_GL383574v1_alt 8289 14 + 155864 tttttttttttttt s panTro5.chr19 36067123 14 + 61309027 tttttttttttttt i panTro5.chr19 C 0 I 2 s panPan2.chr19 39819300 12 + 64411610 --tatttttttttt i panPan2.chr19 C 0 I 2 s gorGor5.CYUI01015150v1 6236846 14 - 8369475 tttttttttttttt i gorGor5.CYUI01015150v1 I 1 I 2 s rheMac8.chr19 30139829 7 + 53671032 -------ctttttt i rheMac8.chr19 C 0 I 2 s macFas5.chr19 34592116 7 + 59248254 -------ctttttt i macFas5.chr19 C 0 I 2 s cerAty1.NW_012005268v1 5391741 7 + 7714307 -------ttttttt i cerAty1.NW_012005268v1 C 0 I 2 s chlSab2.chr6 29199648 7 + 50890351 -------ttttttt i chlSab2.chr6 C 0 I 2 s manLeu1.NW_012102454v1 813031 7 - 2385121 -------ttttttt i manLeu1.NW_012102454v1 C 0 I 2 s colAng1.NW_012111697v1 2258226 7 + 4274983 -------ttttttt i colAng1.NW_012111697v1 C 0 I 2 s calJac3.chr22 28490767 3 + 49145316 -----------ttt i calJac3.chr22 I 12 I 1 s cebCap1.NW_016107633v1 1548493 3 - 2680843 -----------ttt i cebCap1.NW_016107633v1 I 12 I 1 s aotNan1.NW_018505377v1 297763 6 - 4471408 --------tttttt i aotNan1.NW_018505377v1 I 7 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5397628 529 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555895 1 - 122678785 I e saiBol1.JH378197 5333708 22 + 8899380 I e macNem1.NW_012011689v1 4461012 463 - 13342542 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=910921.000000 s hg38.chr19_GL383574v1_alt 8303 118 + 155864 aatagcagggtgttgtggtgaatgcctgtagtcccagtgactatgcacgaggctaagacaagaggattgtttgagcccagaagtttgaggctgtc-gtgagccatgat-cacaccactgt--- s panTro5.chr19 36067139 118 + 61309027 aatagcagggtgttgtggtgaatgcctgtagtcccagtgactatgcatgaggctaagacaagaggattgtttgagcccagaagtttgaggctgtc-gtgagccatgat-cacaccactgt--- i panTro5.chr19 I 2 C 0 s panPan2.chr19 39819314 118 + 64411610 aatagcagggtgttgtggtgaatgcctgtagtcccagtgactatgcacgaggctaagacaagaggattgtttgagcccagaagtttgaggctgtc-gtgagccatgat-cacaccactgt--- i panPan2.chr19 I 2 C 0 s gorGor5.CYUI01015150v1 6236862 118 - 8369475 aatagcagggtgttgtggtgaatgcctgtagtcccagtgactatgcacgaggctaaggcaagaggattgcttgagcccagaagtttgaggctgtc-gtgagccatgat-cacaccactgt--- i gorGor5.CYUI01015150v1 I 2 C 0 s rheMac8.chr19 30139838 118 + 53671032 aatagtggggttctgtggtaaatgcctgtagtcccagtcactatgcaggaggctagggcaagaggattgcttgagcccagaaatttgaggctgtc-atgagccatgat-tacaccactgt--- i rheMac8.chr19 I 2 C 0 s macFas5.chr19 34592125 118 + 59248254 aatagtggggttctgtggtaaatgcctgtagtcccagtcactatgcaggaggctagggcaagaggattgcttgagcccagaaatttgaggctgtc-atgagccatgat-tacaccactgt--- i macFas5.chr19 I 2 C 0 s cerAty1.NW_012005268v1 5391750 118 + 7714307 aatagtggggtgttgtggtaaatgcctgtagtcccagtgactatgcaggaggctagggcaagaggattgcttgagcccagaagtttgaggctgtc-atgagccatgat-tacaccactgt--- i cerAty1.NW_012005268v1 I 2 C 0 s chlSab2.chr6 29199657 118 + 50890351 aatagtggggtgttgtggtaaatgcctgtagtcccagtgactatgcaggaggctagggcaagaggattgcttgagcccagaagtttgaggctgtc-atgagccgtgat-tacaccactgt--- i chlSab2.chr6 I 2 C 0 s manLeu1.NW_012102454v1 813040 118 - 2385121 aatagtggggtgttgtggtaaatgcctgtagtcccagtgactatgcaggaggctagggcaagaggattgcttgagcccagaagtttgaggctgtc-atgagccatgat-tacaccactgt--- i manLeu1.NW_012102454v1 I 2 C 0 s colAng1.NW_012111697v1 2258235 118 + 4274983 aatagtgggctgttgtggtaaacgcctgtagtcccagtgactatgcaggaggctagggcaagaggactgcttgagcccagaagtttgaggctgtc-atgagccatgat-tacaccactgt--- i colAng1.NW_012111697v1 I 2 C 0 s calJac3.chr22 28490771 119 + 49145316 aatagtggggtgttgtggtgcatgcctgtagtcccagtgactattcaggaagctaaaacaagaggatttcttgagcccagaagtttgatgctgtcaataagccatgat-ggcaccactgt--- i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5333730 119 + 8899380 aatagtggggtgttgtggtgcgtgcctgtagtcccagtgactattcaggaagctaaaacaagaggattgcttgagcccagaagtctgatgatgtcaataaaccatgat-ggcaccattgt--- i saiBol1.JH378197 I 22 C 0 s cebCap1.NW_016107633v1 1548497 119 - 2680843 aatagtggggtgttgtggtccatgccagtagtcccagtgactattgaggaagctaaaacaagaggattgcttgaggccagaagtttgatgctgtcaataagccatgat-ggcaccactgt--- i cebCap1.NW_016107633v1 I 1 C 0 s aotNan1.NW_018505377v1 297769 119 - 4471408 aatagtggggtgttgtggtgcatgcctgtagtcccagtgactattcaggaagctaaaacaagaggactgcttgagcccagaagtttgatgctgtcaataagccatgat-ggcaccactgt--- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5398157 118 + 5549422 aatagccgggtgttgtggccggtgcgtgtagtacctgcgact---caggagactgaggcaagagaatcgcct-accccaggagttggaggttgct-gtgagctctgatacacagcacttcggc i otoGar3.GL873654 I 529 C 0 e dasNov3.JH563638 253361 47 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555895 1 - 122678785 I e macNem1.NW_012011689v1 4461012 463 - 13342542 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=397752.000000 s hg38.chr19_GL383574v1_alt 8421 46 + 155864 acttcagcctgggtgacacagcaagaccctatctcaaaagagagag s panTro5.chr19 36067257 46 + 61309027 acttcagcctgggtgacacagcaagaccctatctcaaaagagagag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39819432 46 + 64411610 acttcagcctgggtgacacagcaagaccctatctcaaaagagagag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6236980 46 - 8369475 acttcagcctgggtgacacagcaagaccctatctcaaaagagagag i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30139956 44 + 53671032 acttcagcctgggtgacacagcgagactctatctcaaaaG--ACAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34592243 44 + 59248254 acttcagcctgggtgacacagcgagactctatctcaaaag--aCAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4461475 44 - 13342542 acttcagcctgggtgacacagtgagactctatctcaaaag--aCAG i macNem1.NW_012011689v1 I 463 C 0 s cerAty1.NW_012005268v1 5391868 42 + 7714307 acttcagcctgggtgacacagcgagaccctatctcaaaag----ag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29199775 42 + 50890351 acttcagcctgggtgacacagcgagaccctatctcaaaag----ag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 813158 42 - 2385121 acttcagcctgggtgacacagcgagaccctatctcaaaag----ag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2258353 44 + 4274983 acttcagcctgggtgacacagcgagactctgtctcaaaag--agag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28490890 46 + 49145316 acttcagcctgggtgacacagtgagaccctatctcaaaagagagag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5333849 46 + 8899380 acttcagcctaggtgacacagtgagaccctatctcaaaagagagag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1548616 46 - 2680843 acttcagcctgggtgacacagtgagaccctatctcaaaagagagag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 297888 46 - 4471408 acttcagcctcggtgacacagtgagacactatctcaaaagagagag i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5398275 46 + 5549422 actctacagagggcaacaaagtaagactctatctctaaagaaaaaa i otoGar3.GL873654 C 0 I 100 e dasNov3.JH563638 253361 47 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555895 1 - 122678785 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=536682.000000 s hg38.chr19_GL383574v1_alt 8467 65 + 155864 agacggccaggcgcggtggctcatgcttgtaatcccagcactttgggaggctgaggtgggaggat s panTro5.chr19 36067303 65 + 61309027 agacggccaggcgcggtggctcacacttgtaatcccagcactttgggaggctgaggtgggaggat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39819478 65 + 64411610 agacggccaggcgcggtggctcacgcttgtaatcccagcactttgggaggctgaggtgggaggat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6237026 65 - 8369475 agacggccaggcgcggtggctcacacttgtaatcccagcactttggaaggctgaggtgggaggat i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30140000 65 + 53671032 AGACAgccgggcacggtggctcatatttgtaatcccagcattgtgggaggccaaggtgggaggat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34592287 65 + 59248254 AGACAgccgggcacggtggctcacatttgtaatcccagcattgtgggaggccaaggtgggaggat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4461519 65 - 13342542 AGACAgccgggcacggtggctcacatttgtaatcccagcattgtgggaggccaaggtgggaggat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5391910 65 + 7714307 aaaCAgccgggcgcggtggctcacacttgtaatcccagcattgagggaggccaaggtgggaggat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29199817 65 + 50890351 aaaCAgccgggcgcagtggctcacacttgtaatcccagcattgagggaggccaaggtgggaggat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 813200 65 - 2385121 aaaCAgccgggcgcggtggctcacacttgtaatcccagcattgagggaggccaaggtgggaggat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2258397 65 + 4274983 aaaCAgccgggcgcggtggctcacacttataatcccagcattgtgggaggccaaggtggaaggat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28490936 65 + 49145316 acacagccagacatggtggctcacacttgtaatcccagcactttgggaggctaaagtgggcagat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5333895 65 + 8899380 agacagcaaggcgtggtggctcacacttgtaatcccagcactttgggaggccagagtgggcagat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1548662 65 - 2680843 agacagccaggcgtggtggctcacacttgtaatcccagcactttgggaggccaaagtgggcagat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 297934 65 - 4471408 agacaaccaggcgtggtggctcacacttgtaatcccagcactttgggaggccaaagtcggcagat i aotNan1.NW_018505377v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5398321 100 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555895 1 - 122678785 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=2886946.000000 s hg38.chr19_GL383574v1_alt 8532 339 + 155864 cacttgaggtcaggagttcaagaccag-cctggccagcatggtgaaaccctgtctctactaaaaatacaaaaattagctgggcctggtggtgcatgcctatagtcccagctactcaggaggctgagacaggagaattgcttgaacccaaaaggtagaggttgcagtgagctgaggtggagccactgcactccagcctgggtgacagaacgaaactctgtctc------a------------------------------aaaaaaa---gagagagagacccag------------agagatcccttgccccttt-ctccatg--------ggaggttttagcaaaa---------agacagccatctatgaaccaggagacagtc-ct------------------caccagaaactgaatctgtca s panTro5.chr19 36067368 339 + 61309027 cacttgaggtcaggagttcaagaccag-cctggccaacatggtaaaaccctgtctctactaaaaatacaaaaattagctgggcctggtggtgcacgcctatagtcccagctactcaggaggctgagacaggagaattgcttgaacccaacaggtagaggttgcagtgagctgagatggagccactgcactccagcctgggtgacagaacgaaactctgtctc------a------------------------------aaaaaaa---gagagagagacccag------------agagatcccttgccccttt-ttccatg--------ggaggttttagcaaaa---------agacagccatctatgaaccaggagacagtc-ct------------------caccagaaactgaatctgtca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39819543 339 + 64411610 cacttgaggtcaggagttcaagaccag-cctggccaacatggtaaaaccctgtctctactaaaaatacaaaaattagctgggcctggtggtgcacgcctatagtcccagctactcaggaggctgagacaggagaattgcttgaacccaaaaggtagaggttgcagtgagctgagatggagccactgcactccagcctgggtgacagaacgaaactctgtctc------a------------------------------aaaaaaa---gagagagagacccag------------agagatcccttgccccttt-ttccatg--------ggaggttttagcaaaa---------agacagccatctatgaaccaggagacagtc-ct------------------caccagaaactgaatctgtca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6237091 338 - 8369475 cacttgaggtcacaagttcaagaccag-cctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggcctggtggtgcacgcctatagtcccagctactcaggaggctgagacaggagaattgcttgaacccaaaaggtagaggttgcagtgagctgagatggagccgccgcacaccagcctgggtgacagaacgaaactctgtctc-------------------------------------aaaaaaa---gagagagagacccag------------agagatcccttgccccttt-tgccatg--------ggaggttttagcaaaa---------agacagccatctatgaaccaggagacagtc-ct------------------caccagaaactgaatctgtca i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30140065 341 + 53671032 cacttgaggtcaggaattcaagaccag-cctggccaacatggtgaaaccctgtctctactaaaaatataaaaattagccaggcgtggtagtgcacgtctatagtcccagctactcgggaggctgagacaggagaattgcttgaacccaaaaggtggaggttgcagtgagctgagatggagccactgcactccagcctgggtgacagagcgagactctgtctc------a------------------------------aaaaaaa--TGAGagagagacccag------------agagatctcttgccccttt-ctccatg--------tgaggttttagcaaaa---------agacagccatctatgaaccaggaggcagtccct------------------caccagagactgaatctatca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34592352 341 + 59248254 cacttgaggtcaggaattcaagaccag-cctggccaacatggtgaaaccctgtctctactaaaaatataaaaattagccaggcgtggtagtgcacgtctatagtcccagctactcgggaggctgagacaggagaattgcttgaacccaaaaggtggaggttgcagtgagctgagatggagccactgcactccagcctgggtgacagagcgagactctgtctc------a------------------------------aaaaaaa--TGAGagagagacccag------------agagatctcttgccccttt-ctccatg--------tgaggttttagcaaaa---------agacagccatctatgaaccaggaggcagtccct------------------caccagagactgaatctatca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4461584 341 - 13342542 cacttgaggtcaggaattcaagaccag-cctggccaacatggtgaaaccctgtctctactaaaaatataaaaattagccaggcatggtagtgcacgtctatagtcccagctactcgggaggctgagacaggagaattgcttgaacccaaaaggtggaggttgcagtgacctgagatggagccactgcactccagcctgggtgacagagcgagactctgtctc------a------------------------------aaaaaaa--TGAGagagagacccag------------agagatctcttgccccttt-ctccatg--------tgaggttttagcaaaa---------agacagccatctatgaaccaggaggcagtccct------------------caccagagactgaatctatca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5391975 341 + 7714307 cacttgaggtcaggagttgaagaccag-cctggccaacatggtggaaccctgtctctactaaaaatataaaaattagccaggcatggtggtgcacgtctatagtcccagctactcgggaggctgagacaggagaattgcttgaacccaaaaggtggaggttgcagtgagctgagatggagccactgcactccagcctgggtgacagagcgagactctgtctc------a------------------------------aaaaaaG--TGAGagagagacccag------------agagatcccttgccccttt-ctccatg--------tgaggttttagcaaaa---------agacagccatctatgaaccaggaggcagtccct------------------caccagagactgaatctatca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29199882 341 + 50890351 cacttgaggtcaggagttcaagaccag-cctggccaacatggtgaaaccctgtctctactaaaaatataaaaattagccaagcatggtggtgcacgtctatagtcccagctactcgggaggctgagacaggagaattacttgaacccaaaaggtggaggttgcagtgagctgagatggagccactgcactccagcctgggtgacagagcgagactctgtctc------a------------------------------aaaaaag--tgagagagagacccag------------agagatcccttgccccttt-ctccatg--------tgaggttttagcaaaa---------agacagccatctatgaaccaggaggcagtccct------------------caccagagactgaatctatca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 813265 341 - 2385121 cacttgaggtcaggagttgaagaccag-cctggccaacatggtggaaccctgtctctactaaaaatataaaaattagccaggcatggtggtgcacgtctatagtcccagctactcgggaggctgagacaggagaattgcttgaacccaaaaggtggaggttgcagtgagctgagatggagccactgcactccagcctgggtgacagagcgagactctgtctc------a------------------------------aaaaaaG--TGAGagagagacccag------------agagatcccttgccccttt-ctccatg--------tgaggttttagcaaaa---------agacagccatctatgaaccaggaggcagtccct------------------caccagagactgaatctatca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2258462 341 + 4274983 cacttgaggtcaggagttcaagaccag-cctggccaacatggtgaaaccctgtctctactaaaaatataaaaattagccaggcatggtgatgcacgtctatagtcccagctactcgggaggctgagacaggagaattgcttgaacccaaaaggtggaggttgcagtgagctgagatggagccactgcactccagcctgggtgacagagcgagactctgtctc------a------------------------------aaaaaaa--tgagagagagacccag------------agagatcccttgccccttt-ctccatg--------tgaggttttagcaaaa---------agacagccatctatgaaccaggaggcagtctct------------------caccagagactgaatctatca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28491001 360 + 49145316 cacttgaagtgaggagttcgagaccag-cctgaccaatatggtgacaccccatctctactaaaaatacaaaaattaactgagcatggcggcatatgcctatattcccagctactcaggaagctgagacaggagaattgctggaacctgaaaggtggaggttgcagcaagccaagattatgccactgcactccagcctggatgacagag------tctgtctg------a-aaataaagagagagcctgtctga-aaataaagagagagagagaaagagacccag------------agagatcccttgccccttt-ctccacg--------tgaaattttagcaaaa-------------agccatctatgaacca-ggggcagtccct------------------cgccagacactgaatctgtca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5333960 369 + 8899380 cacttgaggtgaggagttcaagaccag-cctgaccactatgatcacaccccatctctactaaaaacacaaaaattaactgagcatggtggcatatgcctatagtcccagctactcaggaagctgagacaggagaattgcttgaacctgaaaggtggaggttgcagcaagccaagatcatgccactgcactccagcctggatgacagagccagactctgtctA------agagagagagagagagagagagagagagagagacagagagagagagagagacccag------------agagatcccttgccccttt-ctccacg--------tgaaattttagcaaaa-------------agccatctatgaaccagggggcagtccct------------------caccagacactgactctgtca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1548727 339 - 2680843 cacttgaggtgaggagttcaagaccag-cctgatcaatatggtgacaccccatctctactaaaaataaaaaaattaactgagcatggtggcatatgcctatagtcccagctactcaggaagctgagacaggagaattgcttgaacctgaaaggtggagactgcagcaagccaagatcatgccactgcactccagcctggatgacagggccagactctgtctg------a------------------------------aaaaaagagagagagagagacccaa------------agagatcccttgccccttt-ctccacg--------tgaaattttagcaaaa-------------agccatctatgaaccagggggcagtccct------------------caccagacactgaatctgtca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 297999 348 - 4471408 cacttgaggtgaggatttcgagaccag-cctgatcaatatggtgataccccatctctactaaaaatacaaaaattaactgagcatggtggcatatgcctatagtcccagctactcaggaagctgagacaggagaattgcttgaacctgaaaggtggaggttgcagcaagccaagatcatgccactgcactccagcctggatgacagagccagactctgtctg------a-aaaaagaga--------------------gagagagagagacagacaaacccag------------agagatcccttgccccttt-ctccacg--------tgaaattttagcaaaa-------------agccatctatgaaccagggggcagtccct------------------caccagacactgaatctgtca i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5398421 362 + 5549422 taccgagggtggcgggttcaaacacagacctggccaa--------------------actgca---acaaaaaatagcagg---ttgtggcgggcgcctgtaggcccagctactcaggaggttgaagcaaaagaattgcctaagcccagtagttggaggttgctgtgagctgtg-tgacgtcacggcactcta-caaggacaataaagtgagactctgtctctctctta------------------------------aaaaaaa---aaaGTattcattcatctgccaaaattcaaaattttattacacctctgctctgtgaaagaccctgagttagtactaaaagtgcagtttggacagacggtta-----caggagacagtctctgctcttggcacagtttaaagccaagtacagaatatgaca i otoGar3.GL873654 I 100 I 316 e dasNov3.JH563638 253361 47 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555895 1 - 122678785 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=1030632.000000 s hg38.chr19_GL383574v1_alt 8871 128 + 155864 gccttaa-tcttggacatcccagcctccagaactatgagaaataaatttcttttgctgataagccaccggtgtgtgatattttgttac----agcagcccaaatggactaagaTGT-GGG-GTGGGCAGGGAGTC s panTro5.chr19 36067707 128 + 61309027 gccttaa-tcttggacatcccagcctccagaactatgagaaataaatttcttttgctgataagccaccagtgtgtgatattttgttac----agcagcccaaatggactaagaTGT-GGG-GTGGGCAGGGAGTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39819882 128 + 64411610 gccttaa-tcttggacatcccagcctccagaactatgagaaataaatttcttttgctgataagccaccagtgtgtgatattttgttac----agcagcccaaatggactaagaTGT-GGG-GTGGGCAGGGAGTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6237429 109 - 8369475 gcctc-a-tcttgga------------------tatgagaaataaatttcttttgctgataagccactggtgtgtgatattttgttac----agcagcccaaatggactaagaTGT-GGG-GTGGGCAGGGAGTC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30140406 132 + 53671032 gccttaa-tcttggacttcccagcctccagaactatgagaaataaatttcttttgcggataagccaccggtgtgtgatattttgttacagcaagcagctcaaccggactaggacGG-GGG-GTGGGCAGGGAGTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34592693 132 + 59248254 gtcttaa-tcttggacttcccagcctccagaactatgagaaataaatttcttttgcggataagccaccggtgtgtgatattttgttacagcaagcagctcaaccggactaggacGG-GGG-GTGGGCAGGGAGTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4461925 132 - 13342542 gccttaa-tcttggacttcccagcctccagaactatgagaaataaatttcttttgcggataagccaccggtgtgtgatattttgttacagcaagcagctcaaccggactaggacaG-GGG-GTGGGCAGGGAGTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5392316 132 + 7714307 gccttaa-tcttggacttcccagcctccaaaactacgagaaataaatttcttttgctgataagccaccggtgtgtgatattttgttacagcaagcagcccaaccggactaagaTGG-GGG-GTGGGCAGGGAGTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29200223 132 + 50890351 gccttaa-tcttggacttcccagcctccaaaactacgagaaataaatttcttttgctgataagccactggcgtgtgatattttgttacagcaagcagcccaaccggactaagaTGG-GGG-GTGGGCAGGGAGTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 813606 133 - 2385121 gccttaattcttggacttcccagcctccaaaactacgagaaataaatttcttttgctgataagccaccggtgtgtgatattttgttacagcaagcagcccaaccggactaagaTCG-GGG-GTGGGCAGGGAGTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2258803 133 + 4274983 gccttag-tcttggacttcccagcctccagaactatgagaaataaatttcttttgctgataagccaccggtgtgtgatattttgttacagcaagcagcccaaccagactaagataGAGGG-GTGGGCAGGAAGTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28491361 128 + 49145316 gccttga-tcttggacttcccagcctcaaaaactatgagaaataaatttcttttgctgataagccac-ggtgtgtgatatttcgttac----agcagcccaaatggactaagTTAG-GGGGGTGGGCAGGGAGTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5334329 128 + 8899380 gccttga-tcttggactttctagcctcaagaactatgagaaataaatttcttttgctgataagccat-ggtgtgtgatatttcgttac----agcagcccaaatggactaagTTAG-GGGTGTGGGCAGGGAGTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1549066 128 - 2680843 gccttga-tcttggacttcccagcctcaagaactatgagaaataaatttcttttgctgataagccac-ggtgtgtgatatttcgttac----agcagcccaaatggactaagTTAG-GGGTGTGGGCAGGGAGTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 298347 128 - 4471408 gccttga-tcttggacttcccagcctcaagaactatgagaaataaatttcttttgctgataagccac-ggtatgtgatatttcgttat----agcagcccaaatggactaagTTAG-GGGAGTGGGCAGGGAGTC i aotNan1.NW_018505377v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5398783 316 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555895 1 - 122678785 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=369788.000000 s hg38.chr19_GL383574v1_alt 8999 43 + 155864 TTGAGGGACAGGTTTGGCATCATCAAATTTGC--TTTAGAAATAT s panTro5.chr19 36067835 43 + 61309027 TTGAGGGACAGGTCTGGCATCATCAAATTTGC--TTTAGAAATAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39820010 43 + 64411610 TTGAGGGACAGGTCTGGCATCATCAAATTTGC--TTTAGAAATAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6237538 43 - 8369475 TTGAGGGACAGGTCTGGCATCATCAAATTTGC--TTTAGAAATAT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30140538 43 + 53671032 TTGAGGGACAGGTCTGGCATCATCAAATTTGC--TTTAGAAATAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34592825 43 + 59248254 TTGAGGGACAGGTCTGGCATCATCAAATTTGC--TTTAGAAATAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4462057 43 - 13342542 TTGAGGGACAGGTCTGGCATCATCAAATTTGC--TTTAGAAATAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5392448 43 + 7714307 TTGAGGGACAGGTCTGGCATCATCAAATTTGC--TTTAGAAATAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29200355 43 + 50890351 TTGAGGGACAGGTCTGGCATCATCAAATTTGC--TTTAGAAGTAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 813739 43 - 2385121 TTGAGGGACAGGTCTGGCATCATCAAATTTGC--TTTAGAAATGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2258936 43 + 4274983 TTGAGGGACAGGTGTGGCATCATCAAATTTGC--TTTAGAAATAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28491489 43 + 49145316 TAGAGGGACAGGCCTGACATCATCAAATATGA--AATAAAAATAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5334457 41 + 8899380 TAGAGGGACAGGCCTGACATCATCAAATATGG--AATAAAA--AT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1549194 41 - 2680843 TAGAGGGACAGGCCTGACATTATCAAATATGG--AATAAAA--AT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 298475 43 - 4471408 TAGAGGGACAGGCCTGACATCATCAAATATGG--AATAAAAATAT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4555896 45 - 122678785 TTGAGGGCCAGGTCTGGCATCATAAGATTTGCATTTTAGAAAGAT i canFam3.chr1 I 1 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5398783 316 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e nomLeu3.chr10 63832764 0 - 106955855 C a score=36512.000000 s hg38.chr19_GL383574v1_alt 9042 4 + 155864 TATT s panTro5.chr19 36067878 4 + 61309027 TATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39820053 4 + 64411610 TATT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6237581 4 - 8369475 TATT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30140581 4 + 53671032 TATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34592868 4 + 59248254 TATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4462100 4 - 13342542 TATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5392491 4 + 7714307 TATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29200398 4 + 50890351 TATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 813782 4 - 2385121 TATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2258979 4 + 4274983 TATC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28491532 4 + 49145316 TATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5334498 4 + 8899380 TATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1549235 4 - 2680843 TATT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 298518 4 - 4471408 TATT i aotNan1.NW_018505377v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5398783 316 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555941 0 - 122678785 C e nomLeu3.chr10 63832764 0 - 106955855 C a score=1302037.000000 s hg38.chr19_GL383574v1_alt 9046 146 + 155864 TTCAggctgggcgtagtggctcatgcctgtaatcccagcactttagcaggccaaggccagaggatcacttgaggtcaggagttcaacaccagcctggccaacat-ggcgaagccccatctcta-------------------------------------------------------------------------------------------------ct-aaaaaata--------------caaaaattagccga s panTro5.chr19 36067882 146 + 61309027 TTCAggctgggcgtagtggctcatgcctgtaatcccagcactttagtaggccaaggccagcggatcacttgaggtcaggagttcaagaccagcctggccaacat-ggcaaagccccatctcta-------------------------------------------------------------------------------------------------ct-aaaaaata--------------caaaaattagccga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39820057 146 + 64411610 TTCAggctgggcgtagtggctcatgcctgtaatcccagcactttagtaggccaaggccagcggatcacttgaggtcaggagttcaagaccagcctggccaacat-ggcaaagccccatctcta-------------------------------------------------------------------------------------------------ct-aaaaaata--------------caaaaattagccga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6237585 146 - 8369475 TTCAggctgggcgtagtggctcatgcctgtaatcccagcactttagtaggccaaggccagcggatcacttgaggtcaggagttcaagaccagcctggccaacat-ggcaaagccccatctcta-------------------------------------------------------------------------------------------------ct-aaaaaata--------------caaaaattagctgg i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30140585 146 + 53671032 TTCAggctgggtgtagtggctgatgcctgtaatcctagtactttaggaggccaaggccagcggatcacttgaggtcaggagttcaagaccagcctggccaacat-ggcgaagccccgtctcta-------------------------------------------------------------------------------------------------ct-aaaaaata--------------cacaaattagccag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34592872 146 + 59248254 TTCAggctgggtgtagtggctgatgcctgtaatcctagtactttaggaggccaaggccagcggatcacttgaggtcaggagttcaagaccagcctggccaacat-ggcgaagccccgtctcta-------------------------------------------------------------------------------------------------ct-aaaaaata--------------cacaaattagccag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4462104 146 - 13342542 TTCAggctgagtgtagtggctgatgcctgtaatcctagtactttaggaggccaaggccagcggatcacttgaggtcaggagttcaagaccagcctggccaacat-ggcgaagccccgtctcta-------------------------------------------------------------------------------------------------ct-aaaaaata--------------cacaaattagccag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5392495 146 + 7714307 TTCAggctgggcgtagtggctgatgcctgtaatcctagtactttaggaggccaaggccagcggatcacttgaggtcaggagttcaagaccagcctggccaacat-ggcgaagccctgtctcta-------------------------------------------------------------------------------------------------ct-aaaaaata--------------cacaaattagccgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29200402 146 + 50890351 TTCAggctaggcgtagtggctgatgcctgtaatcctagtactttaggaggccaaggccagcggatcacttgaggtcaggagttcaagaccagcctggccaacat-ggcgaagccccgtctcta-------------------------------------------------------------------------------------------------ct-aaaaaata--------------cacaaattagccgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 813786 146 - 2385121 TTCAggctgggcgtagtggctgatgcctgtaatcctagtactttaggaggccaaggccagcggatcacttgaggtcaggagttcaagaccagcctggccaacat-ggcaaagccccgtctcta-------------------------------------------------------------------------------------------------ct-aaaaaata--------------cacaaattagccag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2258983 146 + 4274983 TTCAggctgggcgtagtggctgatgcctgtaatcctagttctttaggaggccaaggccagcggatcacttgaggtcaggagttcaagaccagcctggccaacac-ggtgaagccccatctcta-------------------------------------------------------------------------------------------------ct-aaaaaata--------------caaaaattagccgg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28491536 147 + 49145316 TTCAggctgggcgcagtggctcatgcctgtaatctcagcactttaggaggccaaggctagcagatcacttgaggtcaagagttcaagatcagcctggccaacatgggcaaaaccctgtctcta-------------------------------------------------------------------------------------------------ct-aaaaaata--------------caaaaaatagctga i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5334502 147 + 8899380 TTCAggctgggcgcagtggctcatgcctgtaatcccagcactttaggaggtcaagaccagcagatcacttgaggtcaggagttcgagaccagcctggtcaacat-ggcgaaaccctatctcta-------------------------------------------------------------------------------------------------ctaaaaaaata--------------caaaatatagctga i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1549239 147 - 2680843 TTCAggctgggcacagtggctcatgcctgtaatcccagcactttaggaggtcaaggccagcagatcacttgaggtcaggagttcaggaccagcctggccaacat-ggtaaaaccctatctcta-------------------------------------------------------------------------------------------------ctaaaaaaata--------------caaaaaatagctga i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 298522 144 - 4471408 TTCAggctgggcacagtggctgatgcctgtaatcccagcactttaggaggccaaggccagcagatcacttgaggtcaggagttcaagaccagcctggccaacat-ggcgaaaccctgtctcta-------------------------------------------------------------------------------------------------ct-aaaaaaca--------------caaaaaatagct-- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5399099 246 + 5549422 gtagggccaggcacagtgggtcatgcctgtaatcctagcactct--------gaggcaggtggattgcctgagcctatgagttggaggctAGCCTGTCAAA----ACCAAGACCCCATCTCTAAAAATAGCAAGGCGTTggctcagcgcctatagctctagcaactaaggcgccagccacatacaccagagtcggcgtgtttgaatccatcctgggcctgcc-aaacaacaatgacaactacaaccaaaaaatagccgg i otoGar3.GL873654 I 316 C 0 e dasNov3.JH563638 253361 47 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555941 0 - 122678785 C e nomLeu3.chr10 63832764 0 - 106955855 C a score=1595455.000000 s hg38.chr19_GL383574v1_alt 9192 160 + 155864 gtgtggtggcacacacctgtagtcccagctactctggaggctgaggcaagagaattgcttgaacccagaaggcagaggttgcagtgagccgagatcgcaacactgcactccagcctgagcaacagagagagactctgtctcaaaaaaaaaGGAAT--------TTTTC s panTro5.chr19 36068028 160 + 61309027 gtgtggtggcacacacctgtagtcccagctactccggaggctgaggcaagagaattgcttgaacccagaaggcagaggttgcagtgagccgagatcgcaacactgcactccagcctgagcaacagagagagactctgtctcaaaaaaaaaGGAAT--------TTTTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39820203 160 + 64411610 gtgtggtggcacacacctgtagtcccagctactccggaggctgaggcaagagaattgcttgaacccagaaggcagaggttgcagtgagccgagatcgcaacactgcactccagcctgagcaacagagagagactctgtctcaaaaaaaaaGGAAT--------TTTTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6237731 159 - 8369475 gtgtggtggcacacacctgtagtcccagctactccggaggctgaggcaagagaattgcttgaacccagaaggcagaggttgcagtgagccgagatcgcaacactgcactccagcctgagcaacagagagagactctgtctcaaaaaaaaaGGAAT--------TTTT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63832764 160 - 106955855 gtgtggtggcacacacctgtagtcccagctactccagaggctgaggcaagagaattgcttgaacccagaaggcagaggttgcagtgagccgagatcacaacactgcactccagcctgagcaacagagacagactctgtctcaaaaaaaaaagaaT--------TTTTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30140731 156 + 53671032 gtgtggtggcacacacctttagtcccagctactctggaggctgaggcaagagaattgcttgaacccagaaggcagaagttgcagtgagctgagatcgcaacactgcactccagcctaagcaacagagagagactctgtctcaaaaaaaa--gaaT--------TTT-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34593018 156 + 59248254 gtgtggtggcacacacctttagtcccagctactctggaggctgaggcaagagaattgcttgaacccagaaggcagaagttgcagtgagctgagatcgcaacactgcactccagcctaagcaacagagagagactctgtctcaaaaaaaa--gaaT--------TTT-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4462250 156 - 13342542 gtgtggtggcacacacctttagtcccagctactctggaggctgaggcaagagaattgcttgaacccagaaggcagaagttgcagtgagctgagatcgcaacactgcactccagcctaagcaacagagagagattctgtctcaaaaaaaa--gaaT--------TTT-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5392641 156 + 7714307 gtgtggcggcacacacctgtagtcccagctactctggaggctgaggcaagagaattgcttgaacccagaaggcagaagttgcagtgagccgagatcgcaacattgcactccagcctaagcaacagagagagactctgtctcaaaaaaaa--gaaT--------TTT-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29200548 156 + 50890351 gtgtggtggcacacacctgtagtcccagctactctggaggctgaggcaagagaattgcttgaacccagaaggcagaagttgcagtgagccgagatcgcaacattgcactccagcctaagcaacaaagagagactctgtctcaaaaaaaa--gaaT--------TTT-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 813932 156 - 2385121 gtgtggtggcacacacctgtagtcccagctactctggaggctgaggcaagagaattgcttgaacccagaaggcagaagttgcagtgagctgagatcgcaacactgcactccagcctaagcaacagagagagactctgtctcaaaaaaaa--gaaT--------TTT-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2259129 156 + 4274983 gtgtggtggcacacacctgtagtcccagctactctggaggctgaggcaagagaattgcttgaacccagaaggcagaagttgcagtgagctgagatcgcaacactgcactccagcctaagcaacagagagaaactctgtttccaaaaaaa--gaaT--------TTT-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28491683 160 + 49145316 gtgtggtgatatacacctgtagtcccagctactcaggaggctgaggcaggagaattgcttgaacctggaagtcagaggttgcagtgagccaagatttcaccactgcactccagcctgagcaacagagcaagaccctgtctccaaaaaaaTTAACA--------TTTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5334649 164 + 8899380 gtgtggtgatacacacctgtagtcccagctacccaggaggctgaggcaggagaattgcttaaacctggaagtcagaggttgcagtgagtcgagatttcaccactgcactccagcctgagcaacagagcaagaccctgtcacaaaaaaaaaaaaaa----gaaTTTTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1549386 168 - 2680843 gtgtggtgatacacacctgtagtcccagctactcaggaggctggggcaggagaactgcttgaacctggaagtcagaggttgcagtgagctgagatttcaccactgcactccagcctgagcaacagagcaagaacctgtctcaaaaaaaaaaaaaaaaaaaaaaTTTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 298666 163 - 4471408 gtgtggtgatacacatctgtagacccagctactcaggaggctgaggcagaagaattgcttgaatctggaagtcagaggttgcagtgagccgagatttcaccactgcactccagcctgagcaacagagcaagaccctgtctcaaaaaaaaaaaaaa-----gaaTTTTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5399345 154 + 5549422 gcattgtggccggtgcctgtagtcgcaactacaaagtaggctgaggcaagaggatcatttgagcccaggagtt-gaggttgctgtcagctacgatgatggcacagcactctacccagagtgacagagtaagacactgtctccaaaaaaaaagaaa------------- i otoGar3.GL873654 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4555941 0 - 122678785 C a score=1509356.000000 s hg38.chr19_GL383574v1_alt 9352 133 + 155864 TTTACTCAGAAAAATTAATTATAGATTAGTTTCCATTATTTTGATTACTTTCCAAT------CATACATATCTTAT-CAATTTCTATTGTTCGTTGTTAGGGTAGTTGGACAAATATTTGAGAAACGGTAAGGATAATAA s panTro5.chr19 36068188 133 + 61309027 TTTACTCAGAAAAATTAATTATAGATTAGTTTCCATTATTTTGATTACTTTCCAAT------CATACATATCTTAT-CAATTTCTATTGTTCGTTGTTAGGGTAGTTGGACAAATATTTGAGAAACGGTAAGGATAATAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39820363 133 + 64411610 TTTACTCAGAAAAATTAATTATAGATTAGTTTCCATTATTTTGATTACTTTCCAAT------CATACATATCTTAT-CAATTTCTATTGTTCGTTGTTAGGGTAGTTGGACAAATATTTGAGAAACGGTAAGGATAATAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6237890 133 - 8369475 TTTGCTCAGAAAAATTAATTATAGATTAGTTTCCATTATTTTGATTACTTTCCAAT------CATACATATCTTAT-CAATTTCTATTGTTCATTGTTAGGGTAGTTGGACAAATATTTGAGAAACGGTAAGGATAATAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63832924 133 - 106955855 TTTACTCAGAAAAATTAATTATAGATTAGTTTCCATTATTTTGATTACTTTCCAAT------CATACATATCTTAT-CAATTTCTATTGTTCGTTGTTAGGGTAGTTGGACAAATATTTGAGAAATGGTAAGGATAATAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30140887 132 + 53671032 TTTATTCAGAAAAATTAA-TATAGCTTAGTTTCCATTATTTTGATTACTTTCCAAT------CATACATGTCTTAT-CAATTTCTATTGTTCGTTGTTAGGGTAGTTGGACAAATATTTGAGAAATGGTAAGGATAATAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34593174 132 + 59248254 TTTATTCAGAAAAATTAA-TATAGCTTAGTTTCCATTATTTTGATTACTTTCCAAT------CATACATGTCTTAT-CAATTTCTATTGTTCGTTGTTAGGGTAGTTGGACAAATATTTGAGAAATGGTAAGGATAATAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4462406 132 - 13342542 TTTATTCAGAAAAATTAA-TATAGCTTAGTTTCCATTATTTTGATTACTTTCCAAT------CATACATGTCTTAC-CAATTTCTATTGTTCGTTGTTAGGGTAGTTGGACAAATATTTGAGAAATGGTAAGGATAATAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5392797 132 + 7714307 TTTATTCAGAAAAATTAATTATAGATTAGTTTCCATTA-TTTGATTACTTTCCAAT------CATACATATCTTAT-CAACTTCTATTGTTCATTGTTAGGGTAGTTGGACAAATATTTGAGAAATGGTAAGGATAATAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29200704 132 + 50890351 TTTATTCAGAAAAATTAATTATAGATTAGTTTCCATTA-TTTGATTACTTTCCAAT------CATACATATCTTAT-CAATTTCTATTGTTCGTTGTTAGGGTAGTTGGACAAATATTTGAGAAAAAGTAAGGATAATAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 814088 133 - 2385121 TTTATTCAGAAAAATTAATTATAGCTTAGTTTCCATTATTTTGATTACTTTCCAAT------CATACATATCTTAT-CAATTTCTATTGTTCGTTGTTAGGGTAGTTGGACAAATATTTGAGAAATGGTAAGGATAATAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2259285 133 + 4274983 TTTATTCAGAAAAATTAATTATAGATTAGTTTCCATTATTTTGATTACTTTCCAAT------CATATATATCTTAT-CAATTTCTATTGTTCATTGTTAGGGTAGTTGGACAAATATTTGAGAAATGGTAAGGATAATAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28491843 133 + 49145316 TTCCCTCAGAAAAATTCATTCTAGATGAGTTTCCATTACTTTGATTACTTTTTAAT------CATACATGTCTTAC-CAATTTCTATTGTTTCTTTTTAGGGTAGTTAGACAAATATTTGAGAAATGGCAAGGATAATAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5334813 129 + 8899380 TTCCCTCAGAAAAATTCATCCTAGATGAGTTTCCACTACTTTGATTACTTTCTAAT------TATACATGTCTTAC-CAATTTCTATTGTTCGTTTTTAGGG----TAGACAAATATTTGAGAAATGGTAAGGATAATAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1549554 129 - 2680843 TTCCCTCAGAAAAATTCATTCTAGATGAGTTTCCATTACTTTGATTACTTTCTAAT------CATACATATCTTAC-CAATTTCTACTGTTCGTTTTTAGGG----TAGACAAATATTTGAGAAATGGTAAGGATAATAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 298829 133 - 4471408 TTCCCTCAGAAAAATTCATTCTAGATGAGTTTCCATTACTTTGATTACTTTCTAAT------TATACATGTTTTAC-CAATTTCTATTGTTCGTTTTTAGGGTAGTTAGACAAATATTTGAGAAATGGTAAGGATAATAA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5399499 129 + 5549422 ------aagaaaAATTCACTGTAGATTAGTTTCCATTAATTTTCTTACTTTCCAACCA----CACACACATCTTGC-ACATTCCTATTGTTTGTTGTTAAGGTAGTTGGACAAATATTTGAGATAGAGTAAGAATAATAA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4555941 140 - 122678785 TTTCCTTCGATAAATTCATTATAGACTAGTTTCTATTATTTAGCTTACTTTCCAATCACATGCACACACTTCTTACGCATTTTCTGTTGTTTGTTGTTAAGATCATTGGACAGGTATTTGAATAATGGTAAGATTAATAA i canFam3.chr1 C 0 I 381 e dasNov3.JH563638 253361 47 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I a score=482396.000000 s hg38.chr19_GL383574v1_alt 9485 40 + 155864 AACTAATTGTAGAATGCTATTAAGTTTACAAAGCACTTAG s panTro5.chr19 36068321 40 + 61309027 AACTAATTGTAGAATGCTATTAAGTTTACAAAGCACTTAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39820496 40 + 64411610 AACTAATTGTAGAATGCTATTAAGTTTACAAAGCACTTAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6238023 40 - 8369475 GACTAATTGTAGAATGCTATTAAGTTGACAAAGCACTTAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63833057 38 - 106955855 AAC--ATTGTAGAATGCTATTAAGTTTACAAAGCACTTAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30141019 40 + 53671032 AACTAATTGTAGAATGCTATTAAATTCACAAACCACTTAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34593306 40 + 59248254 AACTAATTGTAGAATGCTATTAAATTCACAAACCACTTAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4462538 40 - 13342542 AACTAATTGTAGAATGCTATTAAATTCACAAACCACTTAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5392929 40 + 7714307 AACTAATTGTAGAATGCTATTAAATTCACAAAGCACTTAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29200836 40 + 50890351 AACTAATTGTAGAACGCTATTAAATTCACAAAGCACTTAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 814221 40 - 2385121 AACTAATTGTAGAATGCTATTAAATTCACAAACCACTTAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2259418 40 + 4274983 AACTAATTATAGAATGCTATTAAATTCACAAAGCACTTAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28491976 40 + 49145316 AACTAATTGTAGAATGCTATTAAGTTTACAAAGCACTTAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5334942 40 + 8899380 AACTAATTGTAGAATACTATTAAGTTTACAAAGCACTTAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1549683 40 - 2680843 AACTAATTGTAGAATGCTATTAAGTTTACAAAGCATTTAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 298962 40 - 4471408 AACTAATTGTAGAATGCTATTAAGTTTACAAAGCACTTAG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5399628 40 + 5549422 AACTAAATGTAGAGTGCTATTAAAATTTTAAAGTTCTTgg i otoGar3.GL873654 C 0 I 1645 s canFam3.chr1 4556462 40 - 122678785 AACTAATTATAGAGTGCTATTAAGTTTACAAAGCACTTTA i canFam3.chr1 I 381 C 0 e dasNov3.JH563638 253361 47 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I a score=2782073.000000 s hg38.chr19_GL383574v1_alt 9525 270 + 155864 TCAT----GCTTTTACTGCATTTACTTAGGAGGCAGATGGTATAGACAGATTTGCACCTGgtgccaccattcttctgccctgtgtccatggaaggcactggtaa-ttgatcacggtacaagctcctgat-gtctcagacacaatctcagaatccttctcaacacaaatttccaggcaagcagtgtcatctgcttaagttgtcacttgatgaaaaattatattt--gccatccTAAAATGG-TTTAAAGCACCCACATTGTGGAATTATAACAACTTGAT s panTro5.chr19 36068361 270 + 61309027 TCAT----GCTTTTACTGCATTTACTTAGGAGGCAGATGGTATAGACAGATTTGCACCTGgtgccaccattcttctgccctgtgtccatggaaggcactggtaa-ttgatcacggtacgagctcccgat-gtctcagacacaatctcagaatccttctcaacacaaatttccaggcaagcagtgtcatctgcttaagttgtcacttgatgaaaaattatattt--gccatccTAAAATGG-TTTAAAGCACCCACATTGTGGAATTATAACAACTTGAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39820536 270 + 64411610 TCAT----GCTTTTACCGCATTTACTTAGGAGGCAGATGGTATAGACAGATTTGCACCTGgtgccaccattcttctgccctgtgtccatggaaggcactggtaa-ttgatcacggtacgagctcccgat-gtctcagacacaatctcagaatccttctcaacacaaatttccaggcaagcagtgtcatctgcttaagttgtcacttgatgaaaaattatattt--gccatccTAAAATGG-TTTAAAGCACCCACATTGTGGAATTATAACAACTTGAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6238063 272 - 8369475 TCAT----GCTTTTACTGCATTTACTTAGGAGGCAGATGGTATAGACAGATTTGCACCTGgtgccaccattcttctgccctgtgtccatggaaggcactggtaatttgatcacggtacaagctcctgat-gtctcagacacaatctcagaatccttctcaacacaaatttccaggcaagcagtgtcatctgcttaagttgtcacttgacgaaaaattatattt--gccatccTAAAATGGTTTTAAAGCACCCACATTGTGGAATTATAACAACTTGAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63833095 270 - 106955855 TCAT----GCTTTTACTGCATTTACTTAGGAGGCAGATGGTATAGACAGATTTGCACCTGgtgccaccattcttctgccctgtgtccatggaaggcactggtaa-ttgatcacggtacaagctcctgat-gtctcagacacaatctcagaatccttctcaacacaaatctccaggcaagcagtgtcatctgcttaagttgtcacttgatgaaaaattatattt--gccatccTAAAACGG-TTTAAAGCACCTACATTGTGGAATTATAACAACTTGAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30141059 259 + 53671032 TCAT----GCTTTTACTGCATTTACTTAAGAGGCAGATGGTATAGACAGATTTGCACCTGgtgccaccattcttctgccctatgtccactgaaggcactggtaa-t-------------agctcctgat-gtctcagacacagtctcacaatccttctcaacacaaatctccaggcaagaagtatcatctgcttaagttgtcacttgataaaaaattatatttgcgccatccTAAAATGG-TGTAAAGCACCTACATTGTGGAATTACAACCACTTGAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34593346 259 + 59248254 TCAT----GCTTTTACTGCATTTACTTAAGAGGCAGATGGTATAGACAGATTTGCACCTGgtgccaccattcttctgccctatgtccactgaaggcactggtaa-t-------------agctcctgat-gtctcagacacagtctcacaatccttctcaacacaaatctccaggcaagaagtatcatctgcttaagttgtcacttgataaaaaattatatttgcgccatccTAAAATGG-TGTAAAGCACCTACATTGTGGAATTACAACCACTTGAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4462578 259 - 13342542 TCAT----GCTTTTACTGCATTTACTTAAGAGGCAGATGGTATAGACAGATTTGCACCTGgtgccaccattcttctgccctatgtccattgaaggcactggtaa-t-------------agctcctgat-gtctcagacacagtctcacaatccttctcaacacaaatctccaggcaagaagtatcatctgcttaagttgtcacttgataaaaaattatatttgcgccatccTAAAATGG-TGTAAAGCACCTACAATGTGGAATTACAACCACTTGAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5392969 272 + 7714307 TCAT----GCTTTTACTGCATTTACTTAAGAGGCAGATGGTATAGACAGATTTGCACCTGgtgccaccattcttctgccctatgtccactgaaggcactggtaa-ttgatcatggtacaagctcctgat-gtctcagacacagtctcacaatccttctcaacacaaatctccaagcaagaagtgtcatctgcttaagttgtcacttgataaaaaattatatttgtgccatccTAAAATGG-TGTAAAGCACCTACATTGTGGAATTATAACCACTTGAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29200876 263 + 50890351 TCA-------------TGCATTTACTTAAGAGGCAGATGGTATAGACAGATTTGCACCTGgtgccaccatccttctgccctatgtccactgaaggcactggtaa-ttgatcatgatacaagctcctgat-gtctcagacacagtctcacaatccttctcaacacaaatctccaggcaagaagtgtcacctgcttaagttgtcacttgataaaaaattatatttgcgccatccTAAAATGG-TGTAAAGCACCTACATTGTGGAATTATAACCACTTGAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 814261 270 - 2385121 TCAT----GCTTTTACTGCATTTACTTAAGAGGCAGATGGTATAGACAGATTTGCACCTGgtgccaccattcttctgccctatgtccactgaaggcactggtaa-ttgatcatggtacaagctcctgat-gtctcag--acagtctcacaatccttctcaacacaaatctccaggcaagaagtgtcatctgcttaagttgtcacttgataaaaaattatatttgcgccatccTAAAATGG-TGTAAAGCACCTACATTGTGGAATTACAACCACTTGAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2259458 272 + 4274983 TCAT----GCTTTTACTGCATTTACTTAAGAGGCAGATGGCATAGACAGATTTTCACCTGgtgccaccattcttctgccctatgtccactgaaggcactggtaa-ttgatcatggtacaagctcctgat-gtctcagacacagtctcacaatccttctcaacacaaatctccaggcaagaagtgtcatctgcttaagttgtcacttgataaaaaattatatttgcgccatccTAAAATGG-TGTAAAGCGCCTACATTGTGGAATTATAACCACTTGAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28492016 270 + 49145316 TCAT----GCTTTTACTGCATTTATTTAGGAGGCAGATGGTATAGACAGAATTGCACCTGgtggcaccattcttccaccctgtgcccatgcaaggcactggcaa-ctaatcacagtacaagctcctgat-gtttcagacacaacctcagaatccttctcaacacaaatctccaggcaagcagtaccatctacttaagttgtcaattgataaaaaattatattt--gccgtccTAAAATGG-TGTAAAGCACCTGCATTGTGGAACTGTAACAACTTGAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5334982 270 + 8899380 TCAT----GCTTTTACTGTATTTACTTAGGAGGCAGACAGTATAGACAGATTTGCACCTGgtggcaccattcttccactctgtgtccatggaaggcactggcaa-ctgatcacagtacaagctcctgat-atttcagacacaacctcagaatccttctcaacacaaatctccaggcaagcagtatcatctacttaagttgtcaattgataaaaaattatattt--gccatccTAAAATGG-CATAAAGCACCTACATTGTGGAACTGTAACAACTTGAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1549723 270 - 2680843 TCAT----GCTTTGACTGCATTTACTTAGGAGGCAGACGGTATAGACAGATTTGCATATGgtggcaccattcttccaccctgtgtccatggaaggcactggcaa-ctaatcacagtacaagctcctgac-gtttcagacacaacctcagaatccttctcaacacaaatctccaggcaagcagtatcatctacttaagttgtcaatggataaaaaattatattt--gccatccTAAAATGG-TGTAAAGCACCTACATTGTGAAACTGTAACAACTTGAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 299002 270 - 4471408 TCAT----GCTTTTACTGCATTTACTTAGGAGGCAGATGGTATAGACAGATTTGCACCTGgtggcaccattcttccaccctgtgtccatggaaggcactggaaa-ctaatcacagtacaagctcctgat-gtttcagacacaacctcagaatccttctcaacacaaatctccaggcaagcagtatcatctacttaagttgtcaattgataaaaaattatattt--gccatccTAAAATGG-TGTAAAGCACCTACATTGTGGAACTGTAACAACTTGAT i aotNan1.NW_018505377v1 C 0 I 7 s canFam3.chr1 4556502 265 - 122678785 CCATAGGCACTCTCGTGGCAGGTACTTAAGAGGCAAAGGGTAGACAGAGATTT---CCTAGTATCA-cattcttccaccctgtgtccacggaagatactgataa-ccaatcatggaacaaagtcctgttggtttcagacacatcctcagaa---ttgtcaacacaaatct---ggcaagtagtgccatttctttgagttgtcatttgatgaaaaattcaattt--gccatccTAGAATGC-TGTAAACCACATCTATTATAGAATCATACAGATGAGGC i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5399668 1645 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I a score=298047.000000 s hg38.chr19_GL383574v1_alt 9795 32 + 155864 TGAAATCCACGACTT-CCACCTTAATACTAGAT s panTro5.chr19 36068631 32 + 61309027 TGAAATCCACGACTT-CCACCTTAATACTAGAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39820806 32 + 64411610 TGAAATCCACGACTT-CCACCTTAATACTAGAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6238335 32 - 8369475 TGAAATCCATGACTT-CCACCTTAATACTAGAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63833365 32 - 106955855 TGAAATCCACGACTT-CCACCTTAATACTAGAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30141318 32 + 53671032 TGAAATCCATGACTT-CCACCTTAATACTAGAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34593605 32 + 59248254 TGAAATCCATGACTT-CCACCTTAATACTAGAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4462837 32 - 13342542 TGAAATCCATGACTT-CCACCTTAATACTAGAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5393241 32 + 7714307 TGAAATCCACGCCTT-CCACCTTAATACTAGAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29201139 32 + 50890351 AGAAATCCATGACTT-CCACCTTAATACTAGAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 814531 32 - 2385121 TGAAATCCATGACTT-CCACCTTAATACTAGAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2259730 32 + 4274983 TGAAATCCATGACTT-CCACCTTAATACTAGAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28492286 32 + 49145316 TGAAATCCCTGGCTT-CCACCTTAATACTAAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5335252 31 + 8899380 TGAAAT-CCTGACTT-CCACCTTAATACTAAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1549993 32 - 2680843 TGAAATCCCTGACTT-CCACTTTAATACTAAAA i cebCap1.NW_016107633v1 C 0 C 0 s canFam3.chr1 4556767 33 - 122678785 TGAAATTCATGATTTCCCACCTTAGTGGTAGAT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5399668 1645 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e aotNan1.NW_018505377v1 299272 7 - 4471408 I a score=291982.000000 s hg38.chr19_GL383574v1_alt 9827 28 + 155864 CTAAGTTACTTGAC---------------TTCTGCTTTTGAGT-- s panTro5.chr19 36068663 28 + 61309027 CTAAGTTACTTGAC---------------TTCTGCTTTTGAGT-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39820838 28 + 64411610 CTAAGTTACTTGAC---------------TTCGGCTTTTGAGT-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6238367 28 - 8369475 CTAAGTTACTTGAC---------------TTCTGCTTTTGAGT-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63833397 28 - 106955855 CTAAGTTACTTGAC---------------TTCCGCTTTtgagt-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30141350 28 + 53671032 CTAAGTTACTTGAC---------------TTCCACTTTTGAGT-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34593637 28 + 59248254 CTAAGTTACTTGAC---------------TTCCACTTTTGAGT-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4462869 28 - 13342542 CTAAGTTACTTGAC---------------TTCCACTTTtgagt-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5393273 28 + 7714307 CTAAGTTACTTGAC---------------TTCCGCTTTTGAGT-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29201171 28 + 50890351 CTAAGTTACTTGAC---------------TTCCACTTTtgagt-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 814563 28 - 2385121 CTAAGTTACTTGAC---------------TTCCACTTTTGAGT-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2259762 28 + 4274983 CTAAGTTACTTGAC---------------TTCCACTTTtgagt-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28492318 28 + 49145316 CTAAGTTACTTGAC---------------TTCCGCTTTTAAGT-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5335283 28 + 8899380 CTAAGTTACTTGAC---------------TTCCGTTTTTAAGT-- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1550025 28 - 2680843 CTAAGTTACCTGAC---------------TTCCGTTTTTAAGT-- i cebCap1.NW_016107633v1 C 0 I 40 s aotNan1.NW_018505377v1 299279 28 - 4471408 CTAAGTTACTTGAC---------------TTCTGCTTTTAAGT-- i aotNan1.NW_018505377v1 I 7 I 36 s canFam3.chr1 4556800 45 - 122678785 CTAAGCTACTTGACATTCCCTGAGTCTGTTTCTTCATTTAAAAAT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5399668 1645 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I a score=35860.000000 s hg38.chr19_GL383574v1_alt 9855 13 + 155864 TGGGAGGgtgtgt s panTro5.chr19 36068691 13 + 61309027 TGGGAGGgtgtgt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39820866 13 + 64411610 TGGGAGGgtgtgt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6238395 10 - 8369475 TGGGGG---gtgt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63833425 7 - 106955855 ggg------gtgt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30141378 13 + 53671032 Ggtgtgtgtgtgc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34593665 13 + 59248254 Ggtgtgtgtgtgc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4462897 13 - 13342542 ggtgtgtgtgtgc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5393301 13 + 7714307 Ggtgtgtgtgtgc i cerAty1.NW_012005268v1 C 0 I 2 s chlSab2.chr6 29201199 13 + 50890351 ggtgtgtgtgtgc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 814591 13 - 2385121 Ggtgtgtgtgtgc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2259790 13 + 4274983 ggtgtgtgtgtgt i colAng1.NW_012111697v1 C 0 I 2 s calJac3.chr22 28492346 7 + 49145316 ------GGTGTGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5335311 7 + 8899380 ------GGTGTGC i saiBol1.JH378197 C 0 C 0 s canFam3.chr1 4556845 13 - 122678785 TAGAAgggcgcct i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5399668 1645 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e aotNan1.NW_018505377v1 299307 36 - 4471408 I e cebCap1.NW_016107633v1 1550053 40 - 2680843 I a score=570745.000000 s hg38.chr19_GL383574v1_alt 9868 148 + 155864 gtgtgtgtgtgt-------atgtgtatgGtttttgtttca-tttttttttt------gagacagaatctcactctgttgcccaggctgaagtgcaatggcgtgatctcagctcactgcaac----ctctgcctcctgggttcaagcaattcccctgcctcagcctc s panTro5.chr19 36068704 150 + 61309027 gtgtgtgtgtgt-------atgtgtatgGtttttgtttca-tttttttttt----ttgagacagaatctcactctgttgcccaggctgaagtgcaatggcgtgatctcagctcactgcaac----ctctgcctcctgggttcaagcaattctcctgcctcagcctc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39820879 149 + 64411610 gtgtgtgtgtgt-------atgtgtatgGtttttgtttca-tttttttttt-----tgagacagaatctcactctgttgcccaggctgaagtgcaatggcgtgatctcagctcactgcaac----ctctgcctcctgggttcaagcaattctcctgcctcagcctc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6238405 154 - 8369475 gtgtgtgtgtgt-------atgtgtatgGtttttgtttca-ttttttttttctttttgagacagaatctcactctgttgcccaggctgaagtgcaatggcatgatctcagctcactgcaac----ctctgcctcctgggttcaagcaattctcctgcctcagcctc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63833432 151 - 106955855 gtgtgtgtgtgt-------atgtgtgtgGtttttgtttca-tttttttttt---tttgagacagagtctcgctctgttgcccaggctgaagtgcaatggcgtgatctcagctcactgcaac----ctctgcctcctaggttcaagcaattctcctgcctcagcctc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30141391 127 + 53671032 gtgtgtgtgtgttgtgtgcgtgtgtgtgGtttttgtttca-ttatatttta--------gacagggtctcgctttgttgcccaggctaaagtgcaatggcacaagctcagctcactgcaac----ctccacctcccaggt-------------------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34593678 127 + 59248254 gtgtgtgtgtgttgtgtgcgtgtgtgtgGtttttgtttca-ttatatttta--------gacagggtctcgctttgttgcccaggctaaagtgcaatggcacaagctcagctcactgcaac----ctccacctcccaggt-------------------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4462910 127 - 13342542 gtgtgtgtgtgttgtgtgcatgtgtgtgGtttttgtttca-ttatatttta--------gacagggtctcgctctgttgcccaggctaaagtgcaatggcacaagctcagctcactgcaac----ctccacctcccaggt-------------------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5393316 127 + 7714307 gtgtgtgtgtgttgtgtgcatgtgtgtgGttttcgtttca-ttttttttta--------gacggagtcttgctctgttgcccaggctaaagtgcaatggcacaacctcagctcactgcaac----ctccacctcccaggt-------------------------- i cerAty1.NW_012005268v1 I 2 C 0 s chlSab2.chr6 29201212 128 + 50890351 atgtgtgtgtgttgtgtgcatgtgtgtgGtttttgtttcatttttttttta--------gacggagtctcactctgttgcccaggctaaaatgcaatggcacaacctcagctcactgcaac----ctccacctcccaggt-------------------------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 814604 127 - 2385121 gtgtgtgtgtgttgtgtgcgtgtgtgtgGtttttgtttca-ttatatttta--------gacggagtcttgctctgttgcccaggctaaagtgcaatggcacaagctcagctcactgcaac----ctccacctcccaggt-------------------------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2259805 127 + 4274983 atgtgtgtatgttgtgtgcatgtgtgtgGtttttgtttca-ttttttttta--------gacagagtatcgctctgttgcccaggctaaagtgcaatggcacaacctcagctcactgcaac----ctccatctcccaggt-------------------------- i colAng1.NW_012111697v1 I 2 C 0 s canFam3.chr1 4556858 88 - 122678785 -----------------------gggtgg--ctcagttta-ttaagctgct--------gac----tcttgattt-cagctcaggt-------------ctcaatctcaaggtggtaaaattgagccctgcctc--aggctc------------------------ i canFam3.chr1 C 0 I 549 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5399668 1645 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e aotNan1.NW_018505377v1 299307 36 - 4471408 I e cebCap1.NW_016107633v1 1550053 40 - 2680843 I e saiBol1.JH378197 5335318 0 + 8899380 C e calJac3.chr22 28492353 0 + 49145316 C a score=888159.000000 s hg38.chr19_GL383574v1_alt 10016 186 + 155864 ctgagtagctgagattacagacatgcatcgccacgcccagctaatttttgtattttagtagagacagggtttaaccatgttggccaagctggtctcgaactcctgacttcaagtgatccacccgcctctgcctcccaaagtgctgggattacaggcatgagccaccttgcctggcTGGttttcgtt s panTro5.chr19 36068854 186 + 61309027 ctgagtagctgagattacagacatgcatcgccacgcccagctaatttttgtattttagtagagacagggtttaaccatgttggccaggctggtctcgaactcctgacttcaagtgatccacccgcctctgcctcccaaagtgctgggattacaggcatgagccaccttgcctggcTGGttttcgtt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39821028 185 + 64411610 ctgagtagctgagattacagacatgcatcgccacgcccagctaatttttgtattttagtagagacagggtttaaccatgttggccaggctggtctcgaactcctgacttcaagtgatccacccgcctctgcctcccaaagtgctgggattacaggcatgagccaccttgcctggcTGGttttcg-t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6238559 185 - 8369475 ctgagtagctgagattacagacatgcatcgccacgcccagctaatttttgtattttagtagagacagggtttaaccatgttggccaggctggtctcgaactcctgacttcaagtgatccaccc-cctctgcctcccaaagtgctgggattacaggcatgagccaccttgcctggcTGGtttttgtt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63833583 186 - 106955855 ccgagtagctgaaattacagacatgcatcgccacacccaactaatttttgtattttagtagagacagggtttaaccatgttggccaggctggtctcgaactcctgacttcaagtgatccaccctcctccgcctcccaaagtgctgggattacaggcatgagccaccgtgcctggcTGGtttttgtt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30141518 159 + 53671032 --------------------------gttgccatgcccagctaatttttgtattttagaagagaga-ggtttaaccatgttggccaggctggttttgaactcctgacttcaagtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagccaccgtgcctggcTGGtttttatt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34593805 159 + 59248254 --------------------------gttgccatgcccagctaatttttgtattttagaagagaga-ggtttaaccatgttggccaggctggttttgaactcctgacttcaagtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagccaccgtgcctggcTGGtttttatt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4463037 159 - 13342542 --------------------------gttgccatgcccagctaatttttgtattttagaagagaca-ggtttaaccatgttggccaggctggtttggaactcctgacttcaagtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagccatcgtgcctggcTGGtttttatt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5393443 159 + 7714307 --------------------------gttgccacgcccagctaatttttgtattttaaaagagaca-ggtttaaccatgttggccaggctggttttgaactcctgacttcaagtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagccaccacgcctggTTGGtttttatt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29201340 159 + 50890351 --------------------------gttgccatgcccagttaatttttgtattttagaagagaca-ggtttaaccacgttggccaggctggttttgaactcctgacttcaagtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagccaccgcgcctggcTGGtttttatt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 814731 159 - 2385121 --------------------------gttgccatgcccagctaatttttgtattttagaagagaca-ggtttaaccatgttggccaggctggttttgaactcctgacttcaagtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagccaccgcgcctggcTGGtttttatt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2259932 159 + 4274983 --------------------------gttgccacgcccagctaatttttgtattttagaagagaca-ggtttaaccatgttggccaggctggttttgaactcctgacttcaagtgatccacctgccttggcctcccaaagtgctgggattacaggaatgagccaccatgcctggcTGGtttttatt i colAng1.NW_012111697v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5399668 1645 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4556946 549 - 122678785 I e aotNan1.NW_018505377v1 299307 36 - 4471408 I e cebCap1.NW_016107633v1 1550053 40 - 2680843 I e saiBol1.JH378197 5335318 0 + 8899380 C e calJac3.chr22 28492353 0 + 49145316 C a score=130816.000000 s hg38.chr19_GL383574v1_alt 10202 31 + 155864 ttttgtttttgggggt-tttttttgagacat--t s panTro5.chr19 36069040 31 + 61309027 ttttgtttttgggggg-tttttttgagacat--t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39821213 31 + 64411610 ttttgtttttgggggg-tttttttgagacat--t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6238744 31 - 8369475 ttttgtttttgggggt-tttttttgagacat--t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63833769 32 - 106955855 ttttgtttttggggggttttttttgagacat--t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30141677 32 + 53671032 ttttg-ttttggggag-tttttttgagacattct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34593964 32 + 59248254 ttttg-ttttggggag-tttttttgagacattct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4463196 32 - 13342542 ttttg-ttttggggag-tttttttgaaacattct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5393602 31 + 7714307 ttttg-ttttggggag--ttttttgagacattct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29201499 31 + 50890351 ttttg-ttttggggag--ttttttgagacattct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 814890 32 - 2385121 ttttg-ttttggggag-tttttttgagacattct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2260091 31 + 4274983 ttttg-ctttggggag--ttttttgagacattct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28492353 27 + 49145316 TTTGGtttttg----t-tttttttgagatggc-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5335318 27 + 8899380 TTTGGtttttg----t-tttttttgagatggc-- i saiBol1.JH378197 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5399668 1645 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4556946 549 - 122678785 I e aotNan1.NW_018505377v1 299307 36 - 4471408 I e cebCap1.NW_016107633v1 1550053 40 - 2680843 I a score=48523.000000 s hg38.chr19_GL383574v1_alt 10233 6 + 155864 ctcgcc s panTro5.chr19 36069071 6 + 61309027 ctcacc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39821244 6 + 64411610 ctcacc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6238775 6 - 8369475 ctcgcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63833801 6 - 106955855 ctcgcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30141709 6 + 53671032 ctcacc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34593996 6 + 59248254 ctcacc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4463228 6 - 13342542 ctcacc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5393633 6 + 7714307 ctcacc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29201530 6 + 50890351 ctcacc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 814922 6 - 2385121 ctcacc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2260122 6 + 4274983 ctcacc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28492380 6 + 49145316 ctcact i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5335345 6 + 8899380 ctcgtt i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 299343 6 - 4471408 ctcgct i aotNan1.NW_018505377v1 I 36 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5399668 1645 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4556946 549 - 122678785 I e cebCap1.NW_016107633v1 1550053 40 - 2680843 I a score=171555.000000 s hg38.chr19_GL383574v1_alt 10239 15 + 155864 ctgttgccaaggctg s panTro5.chr19 36069077 15 + 61309027 ctgttgccaaggctg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39821250 15 + 64411610 ctgttgccaaggctg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6238781 15 - 8369475 ctgttgccaaggctg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63833807 15 - 106955855 ctgttgccaaggctg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30141715 15 + 53671032 ctgttgccaaggctg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34594002 15 + 59248254 ctgttgccaaggctg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4463234 15 - 13342542 ctgttgccaaggctg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5393639 15 + 7714307 ctgttgccaaggctg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29201536 15 + 50890351 ctgttgccaaggctg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 814928 15 - 2385121 ctgttgccaaggctg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2260128 15 + 4274983 ctgttgccaaggctg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28492386 15 + 49145316 ctgttgccaaggctg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5335351 15 + 8899380 ttgttgccaaggctg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1550093 15 - 2680843 ctgttgccaaggctg i cebCap1.NW_016107633v1 I 40 C 0 s aotNan1.NW_018505377v1 299349 15 - 4471408 ctgttgccaaggctg i aotNan1.NW_018505377v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5399668 1645 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4556946 549 - 122678785 I a score=3106402.000000 s hg38.chr19_GL383574v1_alt 10254 306 + 155864 gagtgcagcaccacg--atcacagctcactgcagccttgacctcttgg--tcaagtgatcttcccagctcagcctcctgagtagctgggactactggaatgtgctaccacgtacaactaattttgttttatttttgaagagccagggtctcactatgt----tgcccaggctggtctcgaactcctggactcaggcaatcctcctgcttcagcctcccaaagtgctgggattacagtca--tgagccacc-atgcccagcTAGTTTTCTCATTTTAAAATTAGACATAAAGACATGTAACAGAGGGCTGCTCTAA--------------------CT s panTro5.chr19 36069092 306 + 61309027 gagtgcagcaccacg--atcacagctcactgcagccttgacctcttgg--tcaagtgatcttcccagctcagcctcctgagtagctgggactacaggaatgtgctaccacgtacaactaattttgttttatttttgtagagccaggttctcactatgt----tgcccaggctggtctcgaactcctggactcaggcaatcctcctgcttcagcctcccaaagtgctgggattacagtca--tgagccacc-atgcccagcTAGTTTTCTCATTTTAAAATTAGACATAAAGACATGTAACAGAGGGCTGCTCTAA--------------------CT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39821265 305 + 64411610 gagtgcagcaccacg--atcacagctcactgcagccttgacctcttgg--tcaagtgatcttcccagctcagcctcctgagtagctgggactacaggaatgtgctaccacgtacaactaattttg-tttatttttgtagagccaggttctcactatgt----tgcccaggctggtctcgaactcctggactcaggcaatcctcctgcttcagcctcccaaagtgctgggattacagtca--tgagccacc-atgcccagcTAGTTTTCTCATTTTAAAATTAGACATAAAGACATGTAACAGAGGGCTGCTCTAA--------------------CT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6238796 303 - 8369475 gagcgcagcaccacg--atcacagctcactgcagccttgacctcttgg--tcaagtgatcttcccagctcagcctcctgagtagctgggactacaggaatgtgctaccacgtacaactaattttgttttatttttgtagagcca-gttctcactatgt----tgcccaggctggtctcgaactcctggactcaggcaatcctcctgcttcagcctcccaaagtgct-ggattacagtca--tgagccacc-atg-ccGGCTAGTTTTCTCATTTTAAAATTAGACATAAAGACATGTAACAGAGGGCTGCTCTAA--------------------CT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63833822 308 - 106955855 gagtgcagcaccacg--atcacagctcactgcagccttgacctcttgggctcaagtgatcttcccagctcagcctcctgagtagctgggactacagcaatgtgctaccacgtacaactaattttgttttatttttgtagagccagggtctcgctatgt----tgcccaggctggtctcgaactcctggactcaagcaatcctcctgcttcagcctcccaaagtgctgggattacagtca--tgagccacc-atgcccagcTAGTTTTCTCATTTTAAAATTAGACATAAAGACATGTAACAGAGGGCTGCTGTAA--------------------CT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30141730 308 + 53671032 gagtacagtagcatg--atcacagctcactgcagccttgacctcttgggctcaagtgatcttcccagctcagtctcctgagtagctgggactacaggaatgtgctatcacatacaactaattttgttttatttttgtagagccagggactcgctatgt----tgcccaggctggtctcgaactcctggacgcaggcaatcctcctgcttcagcctcccaaagtgctgggattacagtca--tgagccatc-atgcccagtcAGTTTTCTCATTTTAAAAATAGACATAAAGACATGTAACAGAGGGCTGCTGTAA--------------------CT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34594017 308 + 59248254 gagtacagtagcatg--atcacagctcactgcagccttgacctcttgggctcaagtgatcttcccagctcagtctcctgagtagctgggactacaggaatgtgctatcacatacaactaattttgttttatttttgtagagccagggactcgctatgt----tgcccaggctggtctcgaactcctggacgcaggcaatcctcctgcttcagcctcccaaagtgctgggattacagtca--tgagccacc-atgcccagtcAGTTTTCTCATTTTAAAAATAGACATAAAGACATGTAACAGAGGGCTGCTGTAA--------------------CT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4463249 308 - 13342542 gagtacagtagcatg--atcacagctcactgcagccttgacctcttgggctcaagtgatcttcccagctcagtatcctgagtagctgggactacaggaatgtgctatcacatacaactaattttgttttatttttgtagagccagggactcgctatgt----tgcccaggctggtctcgaactcctggacgcaggcaatcctcttgcttcagcctcccaaagtgctgggattacagtca--tgagccacc-atgcccagtcAGTTTTCTCATTTTAAAAATAGACATAAAGACATGTAACAGAGGGCTGCTGTAA--------------------CT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5393654 308 + 7714307 gagtacagtagcatg--atcacagctcactgcagccttgacctcttgggctcaagtgatcttcccagctcagtctcctgagtagctgggactacaggaatgtgctatcacgtacaactaattttgttttatttttgtagagccagggactcgctatgt----tgcccaggctggtctcgaactcctggacgcaggcaatcctcctgcttcagcctcccaaagtgctgggattacagtca--tgagccatc-acgcccagtcAGTTTTCTCATTTTAAAAATAGACATAAAGACATGTAACAGAGGGCTGCTGTAA--------------------CT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29201551 308 + 50890351 gagtgcagtatcatg--atcacagctcactgcagccttgacctcttgggctcaagtgatcttcccagctcagtctcctgagtagctgggactacaggaatgtgctatcacatacaactaattttgttttatttttgtagagccagggactcgctatgt----tgcccaggctggtctggaactcctggacgcaggcaatcctcctgcttcagcctcccaaagtgctgggattacagtca--tgagccatc-acacccagtcAGTTTTCTCATTTTAAAAATAGACAGAAAGACATGTAACAGAGGGCTGCTGTAA--------------------CT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 814943 308 - 2385121 gagtgcagtagcatg--atcacagctcactgcagccttgacctctcgggctcaagtgatcttcccagctcagtctcctgagtagctgggactacaggaatgtgctatcacatacaactaattttgttttatttttgtagagccagggactcactatgt----tgcccaggctggtctcgaactcctggacgcaggcaatcctcctgcttcagcctcccaaagtgctgggattacagtca--tgagccacc-atgcccagtcAGTTTTCTCATTTTAAAAATAGACATAAAGACATGTAACAGAGGGCTGCTGTAA--------------------CT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2260143 308 + 4274983 gagtgcagtagcatg--atcacagctcactgcagccttgaccttttgggctcaagtgatcttcccagctcagtctcctgagtagctgggactacaggaatgtgctatcacatacaactaattttgttttatttttgtagagccagggactcgctatgt----tgcccaggctggtctcgaacttctggacgcaggcaatcctcctgcttcagcctcccaaagtgctgggattacagtca--tgagccacc-acgcccagtcAGTTTTCTCATTTTAAAAACAGACATAAAGACATGTAACAGAGGGCTGCTGTAA--------------------CT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28492401 307 + 49145316 gagtgcagtggcatg--atcacagcttactgaa-ccttgacctcttgggctcaagagatcttcccacctcagcctcctgagtagctgggactacaggaatatgctaccatgtgcaagtaattttgttctatttttgtagagctgggatctcactatat----tgtccaggcttgccttgaactcctggattcaggcagtcctcctgcttcagcctcccaaagtgctggtattacagtca--tgagccacc-atgcccagccAGTTATCTCATTTTAATATTAGATGTAAAGGCATATAATAGTGGGTTGCTGTAA--------------------CT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5335366 308 + 8899380 gagtgcagtggcatg--atcacagctcactgaagtcttgacctcttgggctcaagagatcttcccacttcagcctcctgagtagctgggactacaggaatatgctaccacgtgcagctaattttgttctatttttgtagagctgggatctcactatat----tgcccaggctactctcaaactcctggattcaggcaatcctcctgcttcagcctcccaaagtgctggaattatagtca--tgagccacc-atgcccagccAGTTTTCTCATTTTAATATTAGATGTAAAGGCATGTAATAGTGGGTTGCTGTAA--------------------CT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1550108 308 - 2680843 gagtgcggtggcatg--atcacagctcactgaagccttgacctcttgggctcaagagatcttcctacctcagccccctgagtagctgggactacaggaatatgctaccatgtgcagctaattttgttctatttttgtagagctgggatctcactatat----tgcccaggctagtctcaaactcctggattcaggcaatcctcctgcttcagcctcccaaagtgctgggattacagtca--tgagccacc-atgcccagccAGTTTTCTCATTTTAATATTAGATGTAAAGGCATGTAATAGTGGGTTGCTGTAA--------------------CT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 299364 308 - 4471408 gagtgcagtggcatg--atcacagctcactgaagccttaacctcttgggctcaagagatcttcccacttcagcctcctgagtagctgggactacaggaatatgctaccatttgcagctaattttgttctatttttgtagagctgggatctcactatat----tgcccaggctagtctcgaactcctggattcaggcaatcctcctgcttcggcctcccaaagtgctgggattacagtca--tgagccacc-gtgcccagccAGTTTTCTCATTTTAATATTAGATGTAAAGGCATGTAACAGTGGGTTGCTGTAA--------------------CT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5401313 290 + 5549422 gagtagagtgctatggcgtcacagctcacagcaacctccaactcctgggctcaagtgagtctcctgtctctgcttcccaagtagctgggaccataggtgcctgccacaacgcccggctattttttggttgc--------agcca-----tcattgtttggtgggcccgggctggattcgaactcactaccttaggtg--------------------tatgtggctggcgccttagccacttgagccacaggtgccgagcc--------------AAGACTAACCTTAACTAAATTAAAAAGGAGCAAACTCTAAAATTGTATCCCCTGTGCATTTA i otoGar3.GL873654 I 1645 C 0 e dasNov3.JH563638 253361 47 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4556946 549 - 122678785 I a score=342553.000000 s hg38.chr19_GL383574v1_alt 10560 27 + 155864 AAATTAAGAAGCAGCAAACTATGAAAT s panTro5.chr19 36069398 27 + 61309027 CAATTAAGAAGCAGCAAACTATGAAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39821570 27 + 64411610 CAATTAAGAAGCAGCAAACTATGAAAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6239099 27 - 8369475 AAATTAAGAAGCAGCAAACTATGAAAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63834130 27 - 106955855 AAATTAAGAAGCAGCAAACTATGAAAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30142038 27 + 53671032 AAATTAAGAAGCAGCAAACTATGAAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34594325 27 + 59248254 AAATTAAGAAGCAGCAAACTATGAAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4463557 27 - 13342542 AAATTAAGAAGCAGCAAACTATGAAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5393962 27 + 7714307 AAATTAAGAAGCAGCAAACTATGAAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29201859 27 + 50890351 AAATTAAGAAGCAGCAAACTATGAAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 815251 27 - 2385121 AAATTAAGAAGCAGCAAACTATGAAAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2260451 27 + 4274983 AAATTAAGAAGCAGTAAACTATGAAAT i colAng1.NW_012111697v1 C 0 I 19 s calJac3.chr22 28492708 27 + 49145316 AAATTAAGAAGCAGAAAACTATGAAAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5335674 27 + 8899380 AAACTAAGAAGCAGCAAACTACGAAAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1550416 27 - 2680843 AAATTAGGAAGCAGCAAACCATGAAAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 299672 27 - 4471408 AAATTAAGAAGCAGCAAACTATGAAAT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5401603 27 + 5549422 GAATTAAAAAGCAGCAAACTCTAAAAT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4557495 27 - 122678785 AAAATAAAAAGAAGCAAACAATGAAAT i canFam3.chr1 I 549 C 0 e dasNov3.JH563638 253361 47 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I a score=143253.000000 s hg38.chr19_GL383574v1_alt 10587 21 + 155864 TTTACCATCTATGTATTTAAC s panTro5.chr19 36069425 21 + 61309027 TTTACCATCTATGTATTTAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39821597 21 + 64411610 TTTACCATCTATGTATTTAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6239126 21 - 8369475 TTTACCATCTATGTCTTTAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63834157 21 - 106955855 TTTACCATCTATGTCTTTAAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30142065 17 + 53671032 TGTACCATCTATGTCTT---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34594352 17 + 59248254 TGTACCATCTATGTCTt---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4463584 17 - 13342542 TGTACCATCTATGTCTT---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5393989 17 + 7714307 TGTACCATCTATGTCTT---- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29201886 17 + 50890351 TGTACCGTCTATGTCTt---- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 815278 17 - 2385121 TGTACCATCTATGTCTT---- i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28492735 17 + 49145316 TGTATCATCTATGTCTT---- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5335701 17 + 8899380 TGTACCATCTATGTCTt---- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1550443 17 - 2680843 TGTACCATCTATGTCTT---- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 299699 17 - 4471408 TGTACCATCTATGTCTT---- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5401630 21 + 5549422 TGTATCCCCTGTGCATTTAGC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4557522 21 - 122678785 TGTATCATCTGTGTATTTACC i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I e colAng1.NW_012111697v1 2260478 19 + 4274983 I a score=599959.000000 s hg38.chr19_GL383574v1_alt 10608 60 + 155864 TATACCAATTCAACGATCCTGCCTTGGCAAGAGAGAGTAAGAGAAAGATAGGAATTAGTA s panTro5.chr19 36069446 60 + 61309027 TATACCAATTCAACGATCCTGCCTTGGCAAGAGAGAGTAAGAGAAAGATAGGAATTAGTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39821618 60 + 64411610 TATACCAATTCAACGATCCTGCCTTGGCAAGAGAGAGTAAGAGAAAGATAGGAATTAGTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6239147 60 - 8369475 TATACCAATTCAACGATCCTGCCTTGGCAAGAGAGAGTAAGAGAAAGATAGGAATTAGTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63834178 60 - 106955855 TATACCAGTTCAATGATTCTGCTTTGACAAGAGAGAGTAAGAGAAAGATAGGAATTAGTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30142082 60 + 53671032 TATACCAATTCAATGATCCTGTTTTGGAAAGAGAGAGTAAGAGAAAGATAGGAATCAGTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34594369 60 + 59248254 tataccaattcaatgatcctgttttggaaagagagagtaagagaaagataggaatcagta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4463601 60 - 13342542 TATACCAATTCAATGATCCTGTTTTGGAAAGAGAGAGTAAGAGAAAGATAGGAATCAGTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5394006 60 + 7714307 TATACCAATTCAATGATCCTGTTTTGGAAAGAGAGAGTAAAAGAAAGATAGGAATCAGTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29201903 60 + 50890351 tataccaattcaatgatcctgttttggaaagagagagtaaaagaaagataggaatcagta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 815295 60 - 2385121 TATACCAATTCAATGATCCTGTTTTGGAAAAAGAGAGTAAGAGAAAGATAGGAATCAGTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2260497 60 + 4274983 TATACCAATTCAATGATCCTGCTTTGGAAAGAGAGAATAAGAGAAAGACAGGAATCAGTA i colAng1.NW_012111697v1 I 19 C 0 s calJac3.chr22 28492752 59 + 49145316 TCTATC-ATTCAATGATCGTGCTTTGGAAAGAGACAGTAAGAGAAAGATAGTAATCAGCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5335718 60 + 8899380 tatatcaattcaatgatcatgctttggaaagagacagtaagagaaagacagtaatcagca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1550460 60 - 2680843 TATATCaattcaattaacatgctttggaaagagacagtaagagaaagatagtaatcagca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 299716 60 - 4471408 TATATCaattcaatgatcatgctttggaaagagacagtaagagaaagatagtaatcagca i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5401651 57 + 5549422 TATGTAAATT-AATGTTCTTGCTCTTAAAAGAGAGGG--AGAGAAAGAGAGGGAAAAGGA i otoGar3.GL873654 C 0 I 177 s canFam3.chr1 4557543 38 - 122678785 TATAGAAATTCAATGATCACGCTATGGAGAGAGA------------------AATc---- i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I a score=2716122.000000 s hg38.chr19_GL383574v1_alt 10668 261 + 155864 ACAattccactcaatgtgcatgcaccccagagcacgtatgggatgggcgacaccttccctagcaatggttattagtctcagtttcagagtgtctc-------------tcacagaataagaggttcacccagtgagagtgggtctgttgttcgaagggacatattttccaaaacacatggcccccaaatgcaagccaagagcattatatattgcttaaatgaaggaccagcagtctatctc-----tagag--aaaaaaaa---ctagctAGGAGGTCCTCCCT s panTro5.chr19 36069506 261 + 61309027 ACAattccattcaatgtgcatgcaccccagagcacgtatgggatgggcgacaccttccctggcaatggttattagtctcagtttcagagtgtctc-------------tcacagaataagaggttcacccaatgagagtgggtctgttgttcaaagggacatattttccaaaacacatggcccccaaatgcaagccaagagcattatatattgcttaaatgaaggaccagcagtctatctc-----tagag--aaaaaaaa---ctagctAGGAGGTCCTCCCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39821678 261 + 64411610 ACAattccactcaatgtgcatgcaccccagagcacgtatgggatgggcgacaccttccctagcaatggttattagtctcagtttcagagtgtctc-------------tcacagaataagaggttcacccaatgagagtgggtctgttgttcaaagggacatattttccaaaacacatggcccccaaatgcaagccaagagcattatatattgcttaaatgaaggaccagcagtctatctc-----tagag--aaaaaaaa---ctagctAGGAGGTCCTCCCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6239207 266 - 8369475 ACAattccactcaatgtgcatgcatcccagagcacgtatgggatgggcgacaccttccctagcaatggttattagtctcattttcagagtgtctc-------------tcacagaataagaggttcacccaatgaaagtgggtctgttgttcgaagggacatattttccaaaacacatggcccccaaatgcaagccaagagcattatatattgcttaaatgaaggaccagcagtctatctctactttagag--aaaaaaaa---ctagctAGGAGGTCCTCCCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63834238 267 - 106955855 ACAattccactcaatgtgcatgcaccccagagcacgtatgggatgggagacaccttccctagcaatggttattagtctcagtttcagtgtgtctc-------------tcacagaatgagaagttcacccaatgagaatgggtctgttgtttgaaggaacatattttccaaaacacatggcctccaaatgcaagccaacagcatcatatattgcttaaatgaaggaccagcagtctatctcaactttagag-aaaaaaaaa---ctagctAGGAGGTCCTCCCT i nomLeu3.chr10 C 0 M 100 s rheMac8.chr19 30142142 269 + 53671032 ACAattccactcaatgtgcatgcaccccagagcacgtatgggatgagagacactttccctagcaatggttattagtttcggtttcagtgtgtctc-------------tcacagcatgagaagttcacccagtgagagtgggtctgtggtttgaagggacatattttccaaaacacatggcccccaaatgcaagccaacagcatcacatattgcttaaacaaaagaccagcagtctatctcaactttagag--aaaaaaaaaacctagctaggagggactccct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34594429 269 + 59248254 acaattccactcaatgtgcatgcaccccagagcacgtatgggatgagagacactttccctagcaatggttattagtttcggtttcagtgtgtctc-------------tcacagcatgagaagttcacccagtgagagtgggtctgtggtttgaagggacatattttccaaaacacatggcccccaaatgcaagccaacagcatcacatattgcttaaacaaaagaccagcagtctatctcaactttagag--aaaaaaaaaacctagctaggagggactccct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4463661 270 - 13342542 ACAattccactcaatgtgcatgcaccccagagcacgtatgggatgagagacactttccctagcaatggttattagtttcggtttcagtgtgtctc-------------tcacagcatgagaagttcacccagtgagagtgggtctgtggtttgaagggacatattttccaaaacacatggcccccaaatgcaagccaacagcatcacatattgcttaaacaaaagaccagcagtctatctcaactttagag-aaaaaaaaaaacctagctaggagggactccct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5394066 270 + 7714307 ACAattccactcaatgtgcatgcaccccagagcacgtatgggatgagagacactttccctagcaatggttattagtttcggtttcagtgtgtctc-------------tcacagaatgagacgttcacccagtgagagtgggtctgtggtttgaagggacatattttccaaaacacagggcccccaaatgcaagccaacagcatcacatattgcttaaacaaaagaccagcagtctatctcaactttagag-aaaaaaaaaaacctagctaggagggactccct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29201963 264 + 50890351 acaattccactcaatgtgcatgtaccccagagcacgtatgggatgagagacactttccctagcaatggttattagtttcagcttcagtgtgtctc-------------tcacagaatgagacgttcacccaatgagagtgggtctgtgatttgaagggacatattttccaaaacacagggcccccaaatgcaagccaacagcatcatatattgcttaaacaaaggaccagcggtttatctcaactttagag--aaaaag-----ctagttaggagggactccct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 815355 269 - 2385121 ACAattccactcagtgtgcatgcaccccagagcacgtatgggatgagagacactttccctagcaatggttattagtttcggtttcagtgtgtctc-------------tcacagaatgagaagttcacccagtgagagtgggtctgtggtttgaagggacatattttccaaaacacatggcccccaaatgcaagccaacagcatcacatattgcttaaacaaaagaccagcagtctatctcaactttagag--aaaaaaaaaacctagctaggagggactccct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2260557 268 + 4274983 ACAattccactcaatgtgcatgcatcccagagcacgtatgggatgagagacaccttccctagcaatggttattagtctcagtttcagtgtgtctc-------------tcacagaatgagaagttcacccaataagagtgggtctgtggtttgaaaggacatattttccaaaacacatagcccccaaatgcaagccaacagcatcaaatattgcttaaacaaaggaccagcagtctatctcaactttagag--gaaaaaaaaa-ctagctaggagggactccct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28492811 267 + 49145316 ACAattccactcaatgtgcatgcaccccaaagtacatatgggatgggagacaccttccctagcaatgattattagtctccgtttcagtgtgcctc-------------tcacagaatgagaagttcaccgaatgaaagtgggtctgttgtttgaagggacatattttccaaaacatacagtccccagatacaagccaatagcatcatatattgcctaaatgaaggaccagcagtctatctgaactttagagaaaaaaAAAA---CTAGCTAGGA-GGCGTCCCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5335778 280 + 8899380 acaattccactcaatgtgcatgcaccccagagcacgtatgggatgggagacaccttccctagcaatgattattagtctcagtttcagtgtgcctctcacagaatgagttcacagaatgagaagttcaccaaatgaaagtgggtctgttgtttgaagggacctattttccaaaacacacggctcccagatgcaagccaacagcatcatatattgcttaaatgaaggaccagcagtctatctcaactttagag-aaaaaaaaa---ctagctAGGAGGGCTTCCCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1550520 280 - 2680843 acaattccactcagtgtgcatgcaccccagagcacgtatgagatgggagacaccttccctagcaatgattattagtctcggtttcagtgtgcctctcacagaatgagttcacagaatgagaagttcaccgaatgaaagtgggtctgttgtttgaagggacatattttccaaaacacatggcccccagatgcaagccaacagcatcatatattgcttaaatgaaggaccagcagtctatctcaactttagag-aaaaaaaaa---ctagctaggagggcttcctt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 299776 279 - 4471408 acaattccactcaatgtgcatgcaccccaaagcacgtatgggatgggagacaccttccctagcaatgattattagtctcagtttcagtgtgcctctcacagaatgagttcacagaatgagaagttcaccgaatgaaagtaggtctgttgtctgaagggacatattttccaaaacacacggcccccaggtgcaagccaacagcatcatatattgcttaaatgaaggaccagcagtctgtctcaactttagag--aaaaaaaa---ctagctAGGAGGGCTTCCCT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4557581 251 - 122678785 acaattccacataacgtgcctgcatcacagaacaaacgtgggactggacgtatcatgcatagcaccatcaattagtct--gtttcggtgtgtatc-------------tcatagaatgagcatctcac----tgcagggagatct----ttgaagggaatatagtttcccaaa-acacagaccttaaatgaaagccaacaatgtcag--gttacttaactgaaaggctagcagtctatcccaactctagag--gaaaaa-----ctgactgggagggcctttct i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5401708 177 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I a score=242659.000000 s hg38.chr19_GL383574v1_alt 10929 26 + 155864 AAGGATATAACAGATATGTTCCTAAT s panTro5.chr19 36069767 26 + 61309027 AAGGATATAACAGATATGTTCCTAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39821939 26 + 64411610 AAGGATATAACAGATATGTTCCTAAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6239473 26 - 8369475 AAGGATATAACAGATATGTTCCTAAT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30142411 26 + 53671032 aagGATATAACAGATATGCTCCTAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34594698 26 + 59248254 aagGATATAACAGATATGCTCCTAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4463931 26 - 13342542 aagGATATAACAGATATGCTCCTAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5394336 26 + 7714307 aaggatataacagatatgttcctaat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29202227 26 + 50890351 aagGATATAACAGATATGTTCCTAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 815624 26 - 2385121 aaggatataacagatatgttcctaat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2260825 26 + 4274983 aaggatataacagatatgttcctaat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28493078 26 + 49145316 AAAGATATAACAGATATATTTCTCAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5336058 26 + 8899380 AAAGATGTAACAGATACATTTCTCAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1550800 26 - 2680843 aaagaTATAACAGATATATTTCTCAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 300055 26 - 4471408 AAAGATATAACAGATATATTTCTCAT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4557832 26 - 122678785 aagGATAAAATGGACATATCCCTAAT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5401708 177 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e nomLeu3.chr10 63834505 100 - 106955855 M a score=193497.000000 s hg38.chr19_GL383574v1_alt 10955 20 + 155864 GGATTTAAATATGGCCAAAg s panTro5.chr19 36069793 20 + 61309027 GGATTTAAATATGGCCAAAg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39821965 20 + 64411610 GGATTTAAATATGGCCAAAg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6239499 20 - 8369475 GGATTTAAATATGGCCAAAg i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30142437 20 + 53671032 GAATTTAAATATGGCCAAAg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34594724 20 + 59248254 GAATTTAAATATGGCCAAAg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4463957 20 - 13342542 GAATTTAAATATGGCCAAAg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5394362 20 + 7714307 ggatttAAATATGGCCAAAg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29202253 20 + 50890351 GGATTTAAATATGGCCAAAg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 815650 20 - 2385121 ggatttAAATATGGCCAAAg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2260851 20 + 4274983 ggatttAAATATGGCCAAAg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28493104 20 + 49145316 GAATTTAAGTATGGCCAAAg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5336084 20 + 8899380 GAATTTAAATATAGCCAAAg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1550826 20 - 2680843 GAATTTAAATACGGCCAAAg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 300081 20 - 4471408 GAATTTAAATATGGCCAAAg i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5401885 11 + 5549422 gagtttgaAT---------g i otoGar3.GL873654 I 177 C 0 s canFam3.chr1 4557858 18 - 122678785 --GGGTATATATGACCAAAA i canFam3.chr1 C 0 I 82 e dasNov3.JH563638 253361 47 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I e nomLeu3.chr10 63834505 100 - 106955855 M a score=339948.000000 s hg38.chr19_GL383574v1_alt 10975 35 + 155864 gctgggtgtggtggctcacacctgtaatcccagca s panTro5.chr19 36069813 35 + 61309027 gctgggtgtggtggctcacacctgtaatcccagca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39821985 35 + 64411610 gctgggtgtggtggctcacacctgtaatcccagca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6239519 35 - 8369475 gctgggtgtggtggctcacacctgtaatcccagca i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30142457 35 + 53671032 gccgggtgtggtggctctcacctgtaatctcagca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34594744 35 + 59248254 gccgggtgtggtggctctcacctgtaatctcagca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4463977 35 - 13342542 gccgggtgtggtggctcacacctgtaatcccagca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5394382 35 + 7714307 gccgggtgtggtggctcacacctgtaatcccagca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29202273 35 + 50890351 gccgggtgtggtggctcacacctgtaattccagca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 815670 35 - 2385121 gccggatgtggtggctcacacctgtaatcccagca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2260871 35 + 4274983 gtcaggtgtggtggctcacacctgtaatcccagta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28493124 35 + 49145316 gcggggcatggtggctcacacctgtaatcccagca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5336104 35 + 8899380 gctgggcatggtggctcacacctgtaatcccagca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1550846 35 - 2680843 gctgggcatggtggctcacacctgtaatcccagca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 300101 35 - 4471408 gccgggcatggtggctcacacctgtaatctcagca i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5401896 31 + 5549422 gctgggcatggtgg----cgcctgtaattccaata i otoGar3.GL873654 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4557876 82 - 122678785 I e nomLeu3.chr10 63834505 100 - 106955855 M a score=2453485.000000 s hg38.chr19_GL383574v1_alt 11010 257 + 155864 ctttgggaggccaaggccggtggatcacctgaggtcagaagttcaagaccagcctggccaacatggcgaaa-ccctgtctctactgaaaatgcaaaaatgagccaggcatggtggtgcatg-cctgtaaccccagctactcgggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagcagagattgtgccact---gcactccagcctgggcaaaagagtgagactccatctcaaaa-----aaat-aaa- s panTro5.chr19 36069848 257 + 61309027 ctttgggaggccaaggccggtggatcacctgaggtcagaagttcaagaccagcctggccaacatggcgaaa-ccctgtctctactgaaaatgcaaaaatgagccaggcatggtggtgcatg-cctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagcagagattgtgccact---gcactccagcctgggcaaaagagtgagactccatctcaaaa-----aaat-aaa- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39822020 257 + 64411610 ctttgggaggccaaggccggtggatcacctgaggtcagaagttcaagaccagcctggccaacatggcgaaa-ccctgtctctactgaaaatgcaaaaatgagccaggcatggtggtgcatg-cctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagcagagattgtgccact---gcactccagcctgggcaaaagagtgagactccatctcaaaa-----aaat-aaa- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6239554 256 - 8369475 ctttgggaggccaaggccggtggat-acctgaggtcagaagttcaagaccagcctggccaacatggcgaaa-ccctgtctctactgaaaatgcaaaaatgagccaggcatggtggtgcatg-cctgtaatcccagctactcgggaggctgaggcatgagaattgcttgaacctgggaggtggaggttgcagtgagcagagattgtgccact---gcactccagtctgggtgacagagcaagactccatctcaaaa-----aaat-aaa- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63834605 231 - 106955855 ctttgggaggccaaggccggtggatcacctgaggtcagaagttcaagacctacctggccaaaatggcgaaa-ccctgtctctactgaaaatacaaaaattagccaggcatggtggttcatg-cctgtaatcccagctactcgggaggctgaggca--------------------------gaggttgcagtgagcagagattgtgccact---gcactccagcctgggcaaaagagtgagactccatctcaaaa-----aaat-aaa- i nomLeu3.chr10 M 100 C 0 s rheMac8.chr19 30142492 256 + 53671032 ttttgggaggccgaggcgggtggatcaccagaggtcagaagttcaagaccggcctggccaacatggcaaaa-ccctgtctctactaaaaatacaaaaattagccagggatggtggcacatg-cctgtaataccagctactcgggaagctgaggcagaagaatcgcttgaacccgggaggcagaggttgcagtgagctaagatcgtgccact---gcactccagcctgggcaaaagagtgagactccatctc-aaa-----aaat-aaa- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34594779 256 + 59248254 ttttgggaggccgaggcgggtggatcaccagaggtcagaagttcaagaccggcctggccaacatggcaaaa-ccctgtctctactaaaaatacaaaaattagccagggatggtggcacatg-cctgtaataccagctactcgggaagctgaggcagaagaatcgcttgaacccgggaggcagaggttgcagtgagctaagatcgtgccact---gcactccagcctgggcaaaagagtgagactccatctc-aaa-----aaat-aaa- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4464012 256 - 13342542 ttttgggaggccgaggcaggtggatcaccagaggtcagaagttcaagaccggcctggccaacatggcaaaa-ccctgtctctactaaaaatacaaaaattagccagggatggtggcacatg-cctgtaataccagctactcgggaagctgaggcagaagaatcgcttgaacccgggaggcagaggttgcagtgagctaagatcgtgccact---gcactccagcctgggcaaaagagtgagactccatctc-aaa-----aaat-aaa- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5394417 253 + 7714307 ttttgggaggccgaggcgggtggatcaccagaggtcagaagttcaagaccggcctggccaacatggcaaaa-ccctgtctctactaaaaatacaaaaattagccagggatggtggcacatg-cctgtaataccagctactcgggaagctgaggcagaagaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcatgccact---gcactccagcctgggtaaaagagtgagactccattcc-aaa-----aaat----- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29202308 256 + 50890351 gtttgggaggccgaggtgggtggatcaccagaggtcagaagtttaagaccagcctggccaacatggcaaaa-ccctgtctctactaaaaatacaaaaattagccaggcatggtggcacatg-cctgtaatcccagctactcgggaagctgaggcagaagaatcgcttgaacccgggaggcagaggttgcagtgagcaaagatcatgccact---gcactccagcctgggcaaaagagtgagactccatctc-aaa-----aaat-aaa- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 815705 256 - 2385121 tttcgggaggccgaggcgggtggatcaccagaggtcagaagttcaagaccggcctggccaacatggcaaag-ccctgtctctactaaaaatacaaaaattagccagggatggtggcacatg-cgtgtaataccagctactcgggaagctgaggcagaagaatcgcttgaacctgggaggcagaggttgcagtgagccgagatcgtgccact---gcattccagcctgggcaaaagagtgagactccatctc-aaa-----aaat-aaa- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2260906 256 + 4274983 ctttgggaggccgaggcaggtggatcaccagaggtcagaagtttaagaccggcctggccaacatggcaaaa-ccctgtctctactaaaaatacaaaaattagccaggcatggtggtacatg-cctgtaatcccagctactcgggaagctgaggcagaagaatcacttgaacccgggaggcagaggttgcagtgagccgagatcatgccatt---gccctccagcctgggcaaaagagtgagactccacctc-aaa-----aaat-aaa- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28493159 248 + 49145316 ctttgggaggccaagaccggtggaacacctgaggtcagaagttcaagaccagcctggccaacatggtgaaa-ccctgactct---------------gttagccaggcatgatggtacatgccctgtgatcccagctactcagggggctgaggcaggagaatgtcttgaacttgggagacagaggttgcagtgagcagagatcatgccact---gcactccagcctgggcaaaagagtgaaactccatttc-aaaaatttaatttaat- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5336139 242 + 8899380 ctttgggaggccaaggcaggtggatcacctgaggtcagaagttcaagaccggcctggccaacatggcgaaa-gcctgattct---------------attagccaggcatggtggcacacg-cctgtgatcccagctactcagggggctaaggcaggaaaatggtttgaacctgggagacagaggttgcagtgagcagagatcatgccact---gcactccagcctgggcaaaagagtgagactccatttc-aaa-----aattaaat- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1550881 237 - 2680843 ctttgggaggccaagacaggtggatcaccggaagtcagaagttcaagaccagcctggccaacatggcgaaa-ccctaactct---------------attagccaggcatggtggcacatg-cctgtgatcccagctactcagggggctgaggcaggagaatggcttgaacctgggagagagaggttgcagtgagcagagatcatgccact---gcactccagcctgggcaaaagagtgagactccatttc-aaa----------aat- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 300136 237 - 4471408 ctttgggaggccaagacaggtggatcacctgaggtcagaagttcaagaccggcctggccaacatggcgaaa-ccctgactct---------------attagccaggcatggtggtacatg-cctgtgatcccagctactcagggggctgaggcaggagaatggcttgaacctgagagacagaggttgcagtgagcagagatcatgccact---gcactccagcctgggcaaaagagtgagactccatttc-aaa----------aat- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5401927 237 + 5549422 -cttgagaggccagggtgggtggactgcctgagctcacaggttcaagaccagcctaagc--cagagcaagacccccatctct------------aaaaatagccaggcactgtggcaggcg-cctgtcatcccagctactaaggaggccaatgcaaaagaatcacttaagcct-agagtttgagcttgctgtgagc------tgtgccaccatggcactctaccaagggcgacataatgacact--gtctc-aaa-----aaaa-aaaa i otoGar3.GL873654 C 0 I 10416 e dasNov3.JH563638 253361 47 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4557876 82 - 122678785 I a score=879746.000000 s hg38.chr19_GL383574v1_alt 11267 97 + 155864 taaataaaataaaaaTTAAAAATGAATATGGCCAAAAAAATCTTTCAAATTCCTCTTCCAATTAGGCTGT-AAATATCTAAATAAGCCACCAGTTTTG s panTro5.chr19 36070105 97 + 61309027 taaataaaataaaaaTTAAAAATGAATATGGCCAAAAAAATCTTTCAAATTCCTCTTCCAATTAGGCTGT-AAATATCTAAATAAGCCACCGGTTTTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39822277 97 + 64411610 taaataaaataaaaaTTAAAAATGAATATGGCCAAAAAAATCTTTCAAAttcctcttccaattaggctgt-aaatatctaaataagccaccggttttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6239810 97 - 8369475 taaataaaataaaaaTTAAAAATGAATATGGCCAAAAAAATCTTTCAAAttcctcttccaattaggctgt-aaatatctaaataagccaccagttttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63834836 97 - 106955855 taaataaaataaaaaTTAAAAATGAATATGGCCAAAAAAATCTTTCAAATTCCCCTTCCAGTTAGGCTGT-AAAGATCTAAATAAGCCACCAGTTTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30142748 97 + 53671032 caaataaaataagaataaaaAATAAATACAGCCAAAAAAATCTTTCAAATTCCTCTTCCAATTAGGCTGT-AAAGATCTAAATAAACCACCAGTTTTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34595035 97 + 59248254 caaataaaataagaataaaaAATAAATACAGCCAAAAAAATCTTTCAAAttcctcttccaattaggctgt-aaagatctaaataaaccaccagttttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4464268 97 - 13342542 caaataaaataagaataaaaAATAAATACAGCCAAAAAAATCTTTCAAAttcctcttccaattaggctgt-aaagatctaaataaaccaccagttttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5394670 96 + 7714307 -aaataaaataagaataaaaaaTAAATACAGCCAAAAAAATCTTTCAAAttcctcttccaattaggctgt-aaagatctaaataaaccaccagttttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29202564 97 + 50890351 caaataaaataagaataaaaAATAAATACAGCCAAAAAAATCTTTCAAATTCCTCTTCCAATTAGGCTGT-AAAGATCTAAATAAACCACCAGTTTTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 815961 97 - 2385121 caaataaaataagaataaaaAATAAATACAGCCAAAAAAATCTTTCAAATTCCTCTTCCAATTAGGCTAT-AAAGATCTAAATAAACCACCAGTTTTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2261162 97 + 4274983 caaataaaataagaataaaaAATAAATACAGCCAAAAAAATCTTTCAAAttcctcttccaattaggctgt-aaagatctaaataaaccaccagttttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28493407 98 + 49145316 ttaatttaatttaaattaaAAAGAAATGTGGCCCAAAAAATCTTTCCAATTCCTCTTCCAATTAGGCTGTAAAAGATGTAAATAAAACACCAGTTTCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5336381 98 + 8899380 taaattaaatttaaattTAAAATAAATGTGGCCAAAAAACTCTTTCCAATTCCTCTTCCAATTAGGCTGTAAAAGATCTAAATAAAACACCAGTTTCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1551118 97 - 2680843 taaattaaatttaaatttaaaataaatGTGGCC-AAAAAATCTTTCCAATTCCTCTTCCAATTAGGCTGTAAAATATGTAAATAAAACACCAGTTTCA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 300373 98 - 4471408 taaattaaatttaaattaaaaataaatGTGGCCAAAAAAATCTTTCTAATTCCTCTTCCAATTAGGCTGTAAAAGATCTAAATAAAACACCAGTTTCA i aotNan1.NW_018505377v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4557876 82 - 122678785 I a score=2523436.000000 s hg38.chr19_GL383574v1_alt 11364 245 + 155864 CTGTAAAGATGGGGGAAAACAGATAAAGTAAAATATCATACTGATTTTT-CAGATGTCTATAAAATAGTctaaaggaactaaattctagagaaagaggacaaggcttcataggt-aggaaaaattagggatcattgggggcatttgccaagtctgggcatgggcaggcagaggatgggccctgccacagaggatggggctctccttggctaagaagaaaccactgattctttaaacatc-tctacggg s panTro5.chr19 36070202 245 + 61309027 CTGTAAAGATGGGGGAAAACAGATAAAGTAAAATATCATACTGATTTTT-CAGATATCTATAAAATAGTctaaaggaactaaattctagagaaagaggacaaggcttcataggt-aggaaaaattagggatcattgggggcatttgccaagtctgggcatgggcaggcagaggatgggccctgccacagaggatggggctctccttggctaagaagaaaccactgattctttaaacatc-tctacggg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39822374 245 + 64411610 ctgtaaagatgggggaaaacagacaaagtaaaatatcatactgattttt-cagatatctataaaatagtctaaaggaactaaattctagagaaagaggacaaggcttcataggt-aggaaaaattagggatcattgggggcatttgccaagtctgggcatgggcaggcagaggatgggccctgccacagaggatggggctctccttggctaagaagaaaccactgattctttaaacatc-tctacggg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6239907 244 - 8369475 ctgtaaaggtgggggaaaacagataaagtaaaatatcatactgattttt-cagatatc-ataaaatagtctaaaggaactaaattctagagaaagaggacaaggcttcataggt-aggaacaattagggatcactgggggcatttgccaagtctgggcatgggcaggcagaggatgggccctgccacagaggatggggctctccttggctaagaagaaaccactgattctttaaacatc-tctacggg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63834933 223 - 106955855 CTCTAAAGATGGGGGAAAAC--ATAAAGTAAAATATCATACTGATTTTT-TGGATATC-ATAAAATAGTctaaaggaactaaattctagagaaagaggacaacgcttcataggt-aggaaaaattagggatcagtgggggcatttgccaagtctgggtatgggcagg-------------------cagaggatggggctctccatggctaagaagaaaccactgattctttaaacatc-tctacggg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30142845 244 + 53671032 TTGTAAACATGGGGGAAAACAGATAAAGTAAAATATCATATTGATTTTT-CAGATATC-ATAAAATAGTctaaaggaactaaattctagagaaaggggacaaggcttcataggt-aggaaaaattagggatcagtgggggcatttgccaagtctgggcatgggcaggcagaagatgggccctgccacagaggatggggctctgcttggctaagaagaaaccactg-ttctttaaactccttctatggg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34595132 244 + 59248254 ttgtaaacatgggggaaaacagataaagtaaaatatcatattgattttt-cagatatc-ataaaatagtctaaaggaactaaattctagagaaaggggacaaggcttcataggt-aggaaaaattagggatcagtgggggcatttgccaagtctgggcatgggcaggcagaagatgggccctgccacagaggatggggctctgcttggctaagaagaaaccactgattctttaaacatc-tctatggg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4464365 244 - 13342542 ttgtaaacatgggggaaaacagataaagtaaaatatcatattgattttt-cagatatc-ataaaatagtctaaaggaactaaattctagagaaaggggacaaggcttcataggt-aggaaaaattagggatcagtgggggcatttgccaagtctgggcatgggcaggcagaagatgggccctgccacagaggatggggctctgcttggctaagaagaaaccactgattctttaaacatc-tctatggg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5394766 244 + 7714307 ttgtaaagatgggggaaaacagataaagtaaaatatcatactgattttt-cagatatc-ataaaatagtctaaaggaactaaattctagagaaaggggacaaggcttcataggt-aggaaaaattagggatcagtggggacatttgccaagtctgggcatgggcaggcagaggacgggccctgccacagaggatggggctctgcttggctaagaagaaaccactgattctttaaacatc-tctatggg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29202661 244 + 50890351 TTATAAAGATGGGGGAAAACAGATAAAGTAAAATATCATACTGATTTTT-CAGATACC-ATAAAATAGTCTAAAGGAACTAAATTCTAGAGAAAAGGGACAAGGCTTCATAGGT-AGGAAAAATTAGGGATCAGtgggggcatttgccaagtctgggcatgggcaggcagaggacgggccctgccacagaggatggggctctgcttggctaagaagaaaccactaattctttaaacatc-tctatggg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 816058 243 - 2385121 TTGTAAAGAT-GGGGAAAACAGATAAAGTAAAATATCACATTGATTTTT-CAGATATC-ATAAAATAGTctaaaggaactaaattctagagaagggggacaaggcttcacaggt-aggaaaaattagggatcagtgggggcatttgccaagtctgggcatgggcaggcagaggacgggccctgccacagaggatggggctctgcttggctaagaagaaaccactgattctttaaacatc-tctatggg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2261259 243 + 4274983 ttgtaaagatgggggaaaacagataaagtaaaatatcatactgattttt-cagatatc-ataaaatagtctaaaggaactaaattctagagaaa-gggacaaggcttcataggt-aggaaaaattagggatcagtgggggcatttgccaagtctgggcatgggcaggcagagaatgggccctgacacagaggatggggctctgcttggctaagaagaaaccactgattctttaaacatc-tctatggg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28493505 244 + 49145316 CTGTAAAGAGGGGGGAAAACAGATGAAGTAAAATATCATATTGATTTTT-CAGGTATC-ATAAAATAGTctaaaggaactaagttctagagaagggag-caagacttcataagtgaggaaagattaaggatcagtaggggcatttgccaagtctggtcatgggcaagcagaggatgggtcctgccacagagaatagggctttgctttgctaagaagaaaccaccgattctttAAACATC-TCTACGGG i calJac3.chr22 C 0 I 931 s saiBol1.JH378197 5336479 241 + 8899380 CTGTGAAGATGGGGGAAAACAGATAAAGTAAAAT---ATATTGATTTTT-TAGATATC-ATAAAATAGTctaaaggaactaaattctggagaagggag-caagacttcataagtgaggaaaaattaaggatcagtaggggcatttgccaagtctggtcatgggcaggcagaggataggtcctgccacagaggatggggctctgcttggctaagaagaaaccactgattctttaaacatc-tctatggg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1551215 244 - 2680843 CTGTAAAGATGGGggaaaacagataaagtaaaatatcatattgattttt-cagatatc-ataaaatagtctaaaggaactaaattctagagaagggag-caagacttcataagtgaggaaagattaaggatcagtaggagcatttgccaagtctggtcatgggcaggcagaggatgggtcctgccacaggggttggggctctgcttggctaagaggaaaccactgattctttaaacatc-tctatggg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 300471 225 - 4471408 CTGTAAAGATGGGGGAAAACAGATAAAGTAAAATATTATATTGATTTTT-CAGATATC-ATAAAATAGTctaaaggaaccaaattctagagaaaggag-caaagcttcataagtgaggaaagattaaggatcagtaggggcatttgccaagtctagtcttgggcaggcagagga-------------------tggggctctgcttggctaagaagaaaccactgattctttaaacatc-tctacggg i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4557958 220 - 122678785 gtgtaaag-----------------aagcaaaat---atatttatttgtacaaatatc-acaaaatagcctaaaggaactaaattctggagaagggggacaagatttcatagat-----gagattaaccgctctggggggcatttgtcacatctgggcatgggcaggcaaatgatgaggcctcccacag-tcagagggctctgcttggcaaagaagaaaccactaacactttAAACATC-TCTATGGA i canFam3.chr1 I 82 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I a score=1816814.000000 s hg38.chr19_GL383574v1_alt 11609 207 + 155864 ctg-gagcaacagatggaaatatctaagaactc-aaaacacag-tgctagtcttccatttttgctaagtgggttacagtgcaggaggctgggtcttctgtcttcct-cattgaaagaca-gacagaaaactccactaattcttcatgctcaggtcc-aaaattccactagaagaaggggcccacaagacacgcagatcacatcttgcccttaa s panTro5.chr19 36070447 207 + 61309027 ctg-gagcaacagatggaaatatctaagaactc-aaaacacag-tgctagtcttccatttttgctaagtgggttacagtgcaggaggctgggtcttctgtcttcct-cactgaaagaca-gacagaaaactccactaattcttcatgctcaggtcc-aaaattccactagaagaaggggcccgcaagacacgcagatcacatcttgcccttaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39822619 207 + 64411610 ctg-gagcaacagatggaaatatctaagaactc-aaaacacag-tgctagtcttccatttttgctaagtgggttacagtgcaggaggctgggtcttctgtcttcct-cactgaaagaca-gacagaaaactccactaattcttcatgctcaggtcc-aaaattccactagaagaaggggcccgcaagacacgcagatcacatcttgcccttaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6240151 207 - 8369475 ctg-gagcaacagatggaaatatctaagaactc-aaaacacag-cgctagtcttccatttttgctaagtgggttacagtgcaggaggctgggtcttctgtcttcct-cattgaaagaca-gacagaaaactccactaactcttcatgctcgggtcc-aaaattccactagaagaaggggcccacaagacacacagatcacatcttgcccttaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63835156 207 - 106955855 ctg-gagcaacagatggaaatatctaagaactc-aaaacacag-tgctagtcttccatttttgctaagtgggttgcagtgcaggaggctgggtcttctgtcttcct-cattgaaagaca-gacagaaaattccactaactcttcatgcttgggtcc-aaaattccactagaagaaggggccCATAAGACACGCAGATCACATCTTGCCCTTAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30143089 207 + 53671032 ctgaaagcaacagatgg-aatatctaagaactcaaaaacacagttgctagtcctcc-cttttgctaagtgggttgcagtgcagg-ggctgggg-TTCCGTCTTCCTCCACTGAAAAGGACGAGAGGAAACTCCACTAACTCTTCATGCTTGGGTCCAAAAATCCCACTAGAAGAAAGGGGCCATAAGACA--CAGAGCACATCTTGCCCTTAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34595376 205 + 59248254 ctg-aagcaacagatggaaatatctaagaactc-aaaacacag-tgctagtcttccacttttgctaagtgggttgcagtgcaggaggctgggtcttccgtcttcct-cactgaaagacg-gagagaaaactccactaactcttcatgcttgggtcc-aaaattccactagaagaaggggccCATAAGACA--CAGAGCACATCTTGCCCTTAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4464609 205 - 13342542 ctg-aagcaacagatggaaatatctaagaactc-aaaacacag-tgctagtcttccacttttgctaagtgggttgcagtgcaggaggctgggtcttccgtcttcct-cactaaaagaca-gagagaaaactccactaactcttcatgcttgggtcc-aaaattccactagaagaaggggcccataagaca--cagagcacatcttgcccttaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5395010 205 + 7714307 ctg-aagcaacagatggaaatatctaagaactc-aaaacacag-tgctagtcttccatttttgctaagtgggttgcagtgcaggaggctgggtcttctgtcttcct-cactgaaagaca-gagagaaaactctactaactcttcatgcttgggtcc-aaaattccactagaagaaggggcccataagacg--cagatcacatcttgcccttaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29202905 205 + 50890351 ctg-aagcaacagatggaaatatctaagaactc-aaaacacag-tgctagtcttccatttttgctaagtgggttgcagtgcaggaggctgggtcttctgtcttcct-cactgaaagaca-gagagaaaactccactaactcttcatgcttgggtgc-aaaattcctctagaagaaggggccCATAAGATG--CAGATCACATCTTGCTCTTAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 816301 200 - 2385121 ctg-aagcaacagatggaaatatctaagaactc-aaaacacag-tgctagtcttccatttttgctaagtgggttgcagtgcaggaggctgggtcttctgtcttcct-cactgaaagaca-gagagaaaactccact-----ttcatgcttgggtcc-aaaattccactagaagaaggggcccataagaca--cagatcacatcttgcccttaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2261502 205 + 4274983 ctg-aagcaacagatggaaatatctaagaactc-aaaacacag-tgctaatcttccatttttgctaagtgggttgcagtgcaggaggctgggtcttctgttttcct-cactgaaagaca-gagagaaaactccactaactcttcatgcttgggtcc-aaaatttcactagaagaaggggcccataagatg--cagatcacatcttgcccttaa i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5336720 203 + 8899380 ctg-gagtaacagatggaaatatgtaagaacta-aaaccgtag-cactagtcttccatttttgctaagtggattgcagtacaagaggctgggTCTTCTGTCTCCCT-CACAGAAA-----GAGAGAAAACTCCACTAACTCTTCATGCTTGGGTCC-AAAATTCCACTAGAAAAAGGAACCCATAAGACACGCAGATGACATCTTGCCCTTAA i saiBol1.JH378197 C 0 I 2 s cebCap1.NW_016107633v1 1551459 203 - 2680843 ctg-gagtaacagatggaaatatgtaagaacta-aaaccacag-cactagtcttccatttttgctaagtgggttgcagtgcaagaggctgggTCTTCTGTCTCCCT-CACTGAAA-----GGGAGAAAACTCCACTAACTCTTCATGCTTGGGTCC-AAAATTCCACTAGAAGAAGGAACCCATAAGACACGCAGATGACATCTTGCCCTTAA i cebCap1.NW_016107633v1 C 0 I 784 s aotNan1.NW_018505377v1 300696 203 - 4471408 ctg-gagtaacagatggaaatatgtaagaacta-aaaccacag-cactagtcttccatttttgctaagtgggttgcagtgcaagaggctgggTCTTCTGTCTCCCT-CACTGAAA-----AGGAGAAAACTCTACTAACTCTTCATGCTTGGGTAC-AAAATTCCACTAGAAGAAGGAACCCATAAGACACGCAGATGACATCTTGCCCTTAA i aotNan1.NW_018505377v1 C 0 I 2 s canFam3.chr1 4558178 186 - 122678785 CTA-AACCAACAGATAAGAATATATGAAAATTC-AAAACACAG-AACTAGTCTTCCTCTTTGATTAAATGGGCGGCAGGGCAGAAGCCTGGGGCCTG----------AACGGAAAGACA------------TTATCATCTCCCAATGCTTGGGTCC--AGGTCCCACTAGAAGGGGAAGCCTCTAAGACACATCGATCATATCTTGCCCTCAA i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e calJac3.chr22 28493749 931 + 49145316 I a score=124624.000000 s hg38.chr19_GL383574v1_alt 11816 16 + 155864 gacatttaaaatccag s panTro5.chr19 36070654 16 + 61309027 gacatttaaaatccag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39822826 16 + 64411610 gacatttaaaatccag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6240358 16 - 8369475 gacatttaaaatccag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63835363 16 - 106955855 GACATTTAAAATCCAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30143296 15 + 53671032 GA-ATTTAAaatccag i rheMac8.chr19 C 0 I 375 s macFas5.chr19 34595581 16 + 59248254 GACATTTAAAATCCAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4464814 16 - 13342542 gacatttaaaatccag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5395215 16 + 7714307 gacgtttaaaatccag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29203110 16 + 50890351 GACatttaaaatccag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 816501 16 - 2385121 gacatttaaaatccag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2261707 16 + 4274983 gacatttaaaatccag i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5336925 16 + 8899380 CCCATTTAAAACCCAA i saiBol1.JH378197 I 2 C 0 s aotNan1.NW_018505377v1 300901 16 - 4471408 CCCATTTAAAACCCAA i aotNan1.NW_018505377v1 I 2 C 0 s canFam3.chr1 4558364 16 - 122678785 GGCATTTGAAGCCCAG i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e cebCap1.NW_016107633v1 1551662 784 - 2680843 I e calJac3.chr22 28493749 931 + 49145316 I a score=60734.000000 s hg38.chr19_GL383574v1_alt 11832 13 + 155864 gtgaacaaaaact s panTro5.chr19 36070670 13 + 61309027 gtgaacaaaaact i panTro5.chr19 C 0 C 0 s panPan2.chr19 39822842 13 + 64411610 gtgaacaaaaact i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6240374 13 - 8369475 gtgaacaaaaact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63835379 9 - 106955855 GTGAACAAA---- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34595597 13 + 59248254 GTGGACAAAAGCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4464830 13 - 13342542 gtggacaaaagct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5395231 13 + 7714307 gtggacaaaagct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29203126 13 + 50890351 gtggacaaaagct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 816517 13 - 2385121 gtggacaaaagct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2261723 13 + 4274983 gtggacaaaagct i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5336941 9 + 8899380 GTGAACAGA---- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 300917 9 - 4471408 GTGAACAGA---- i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4558380 13 - 122678785 GTGAACTTATACT i canFam3.chr1 C 0 I 1475 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e cebCap1.NW_016107633v1 1551662 784 - 2680843 I e calJac3.chr22 28493749 931 + 49145316 I e rheMac8.chr19 30143311 375 + 53671032 I a score=253536.000000 s hg38.chr19_GL383574v1_alt 11845 39 + 155864 aactaaatctgcaattcatccaaccccaattcagctcca s panTro5.chr19 36070683 39 + 61309027 aactaaatctgcaattcatccaaccccaattcagctcca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39822855 39 + 64411610 aactaaatctgcaattcatccaaccccaattcagctcca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6240387 39 - 8369475 aactaaatctgcaattcatccaaccccaattcagctcca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63835388 39 - 106955855 AACTAAATCTGCAATTCatccagccccagttcaactcca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34595610 39 + 59248254 AACTGAACCTGCAACTAATCCAACCCCAATTCAGCTCCA i macFas5.chr19 C 0 M 817 s macNem1.NW_012011689v1 4464843 39 - 13342542 aactaaacctgcaactaatccaaccccaattcagctcca i macNem1.NW_012011689v1 C 0 I 2 s cerAty1.NW_012005268v1 5395244 39 + 7714307 aactaaacctgcaattaatccaaccccaattcagctcca i cerAty1.NW_012005268v1 C 0 I 2 s chlSab2.chr6 29203139 39 + 50890351 aactaaacctgcaattaatccaaccccaattcagctcca i chlSab2.chr6 C 0 I 2 s manLeu1.NW_012102454v1 816530 39 - 2385121 aactaaacctgcaattaatccaaccccaattcagctcca i manLeu1.NW_012102454v1 C 0 I 2 s colAng1.NW_012111697v1 2261736 39 + 4274983 aactaaacctgcaattaatccaaccccaattcagctcca i colAng1.NW_012111697v1 C 0 I 2 s saiBol1.JH378197 5336950 39 + 8899380 AATTGAATCTGCAATTCAACCAACCCCAACTCGGCTCCA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 300926 39 - 4471408 AATTGAATCTGCAATTCATCCAACCCCAACTCAGCTCCA i aotNan1.NW_018505377v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e cebCap1.NW_016107633v1 1551662 784 - 2680843 I e calJac3.chr22 28493749 931 + 49145316 I e rheMac8.chr19 30143311 375 + 53671032 I a score=-6539.000000 s hg38.chr19_GL383574v1_alt 11884 2 + 155864 ct s panTro5.chr19 36070722 2 + 61309027 ct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39822894 2 + 64411610 ct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6240426 2 - 8369475 ct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63835427 2 - 106955855 ct i nomLeu3.chr10 C 0 C 0 s macNem1.NW_012011689v1 4464884 1 - 13342542 c- i macNem1.NW_012011689v1 I 2 C 0 s cerAty1.NW_012005268v1 5395285 1 + 7714307 c- i cerAty1.NW_012005268v1 I 2 C 0 s chlSab2.chr6 29203180 1 + 50890351 c- i chlSab2.chr6 I 2 C 0 s manLeu1.NW_012102454v1 816571 1 - 2385121 c- i manLeu1.NW_012102454v1 I 2 C 0 s colAng1.NW_012111697v1 2261777 1 + 4274983 c- i colAng1.NW_012111697v1 I 2 C 0 s saiBol1.JH378197 5336989 2 + 8899380 CT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 300965 2 - 4471408 CT i aotNan1.NW_018505377v1 C 0 I 345 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e cebCap1.NW_016107633v1 1551662 784 - 2680843 I e calJac3.chr22 28493749 931 + 49145316 I e macFas5.chr19 34595649 817 + 59248254 M e rheMac8.chr19 30143311 375 + 53671032 I a score=375.000000 s hg38.chr19_GL383574v1_alt 11886 1 + 155864 g s panTro5.chr19 36070724 1 + 61309027 c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39822896 1 + 64411610 c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6240428 1 - 8369475 c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63835429 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s saiBol1.JH378197 5336991 1 + 8899380 C i saiBol1.JH378197 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e chlSab2.chr6 29203181 0 + 50890351 C e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I e cebCap1.NW_016107633v1 1551662 784 - 2680843 I e calJac3.chr22 28493749 931 + 49145316 I e colAng1.NW_012111697v1 2261778 0 + 4274983 C e manLeu1.NW_012102454v1 816572 0 - 2385121 C e cerAty1.NW_012005268v1 5395286 0 + 7714307 C e macNem1.NW_012011689v1 4464885 0 - 13342542 C e macFas5.chr19 34595649 817 + 59248254 M e rheMac8.chr19 30143311 375 + 53671032 I a score=12012.000000 s hg38.chr19_GL383574v1_alt 11887 2 + 155864 tt s panTro5.chr19 36070725 2 + 61309027 tt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39822897 2 + 64411610 tt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6240429 2 - 8369475 tt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63835430 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34596496 2 + 59248254 tt i macFas5.chr19 M 817 C 0 s macNem1.NW_012011689v1 4464885 2 - 13342542 tt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5395286 2 + 7714307 tt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29203181 2 + 50890351 tt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 816572 2 - 2385121 tt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2261778 2 + 4274983 tt i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5336992 2 + 8899380 tt i saiBol1.JH378197 C 0 I 739 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I e cebCap1.NW_016107633v1 1551662 784 - 2680843 I e calJac3.chr22 28493749 931 + 49145316 I e rheMac8.chr19 30143311 375 + 53671032 I a score=86500.000000 s hg38.chr19_GL383574v1_alt 11889 18 + 155864 gattggatctgactgatc s panTro5.chr19 36070727 18 + 61309027 gattggatctgactgatc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39822899 18 + 64411610 gattggatctgactgatc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6240431 18 - 8369475 gattggatctgactgatc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63835432 18 - 106955855 gattggatcttaatgatc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34596498 18 + 59248254 gattggatctgactgatc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4464887 18 - 13342542 gactggatctgactgatc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5395288 18 + 7714307 gattggatctgactgatc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29203183 18 + 50890351 gattggatctgactgatc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 816574 18 - 2385121 gattggatctgactgatc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2261780 18 + 4274983 gattggatctgactgctc i colAng1.NW_012111697v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I e cebCap1.NW_016107633v1 1551662 784 - 2680843 I e saiBol1.JH378197 5336994 739 + 8899380 I e calJac3.chr22 28493749 931 + 49145316 I e rheMac8.chr19 30143311 375 + 53671032 I a score=3952440.000000 s hg38.chr19_GL383574v1_alt 11907 712 + 155864 -aagctcctcatcctaattgactggcaagaggaaagggcttgccctctccagggaaaaaaatatttacttccgtcactttggttctttacaatgtctagaatacagtatctagctagacacaatatctggcat-aaaattaaaaattatgagatgcaaagaagcaggaaaatgtgatgcataatcaagag-aaaaaacaat----acatgcagattcttatatgattgagatgctggaactcacagataaggactttatgataattactataaatatgttaatgaaattagagcat-aaaatagacaaaatgataagaagatgaaga-----ttttt---------ttttttttttt---ggagacagaatttcactcttgtcgcc-----cagacaggagtgcaatggcatgatctcggctcactgcaacctccacctcccgggttcaagcaattctcctgcctcagtctccccagtagctaggattacaggttcctgccaccacacccagctaattttggtatttttagtagagatggggtttcactgtgttggccaggctggtcctgaactcctgacttcaggtgatccacctgtcttggcctcccaaagtgctgggattacaagcatgagccactgtgccaagccaacaagatgcagattttcaacagaaaaatACACTCTCTTTAaaaagatagctggacgtggtggtgtgcacctgtggtcccagctacttggggg s panTro5.chr19 36070745 718 + 61309027 -a-gctcctcatcctaattgactggcaagaagaaagggcttgccctctccagggaaaaaaatatttacttcagtcactttggttctttacaatgtctagaatacagtatctagctagacacaatatctggcat-aaaatttaaaattatgagatgcaaagaagcaggaaaatgtgatgcataatcaagag-aaaaaacaatcaatacatgcagattcttatatgattgagatgctggaactcacagataaggactttatgataattactataaatatgttaatgaaattagagcat-aaaatagacaaaatgataagaagatgaagt-----ttttt---------ttttttttttttttggagacagaatttcactcttgtcgcc-----cagacaggagtgcaatggcatgatctcggctcactgcaacctccacctcccgggttcaagcaattctcctgcctcagtctccccagtagctaggattacaggttcctgccaccacacccagctaattttggtatttttagtagagatggggtttcactgcgttggccaggctggtcctgaactcctgacttcaggtgatccacctgtcttggcctcccaaagtgctgggattacaagcacgagccactgtgccaagtcaacaagatgcagattttcaacagaaaaataCACTCTCTTTAaaaagatagctggacgtggtggggtgcacctgtggtcccagctacttggggg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39822917 714 + 64411610 -a-gctcctcatcctaattgactggcaagaagaaagggcttgccctctccagggaaaaaaatatttacttcagtcactttggttctttacaatgtctaaaatacagtatctagctagacacaatatctggcat-aaaatttaaaattatgagatgcaaagaagcaggaaaatgtgatgcataatcaagag-aaaaaacaatcaatacatgcagattcttatatgattgagatgctggaactcacagataaggactttatgataattactataaatatgttaatgaaattagagcat-aaaatagacaaaatgataagaagatgaaga-----ttttt---------tttttttttt----ggagacagaatttcactcttgtcgcc-----cagacaggagtgcaatggcatgatctcggctcactgcaacctccacctcccgggttcaagcaattctcctgcctcagtctccccagtagctaggattacaggttcctgccaccacacccagctaattttggtatttttagtagagatggggtttcactgtgttggccaggctggtcctgaactcctgacttcaggtgatccacctgtcttggcctcccaaagtgctgggattacaagcatgagccactgtgccaagtcaacaagatgcagattttcaacagaaaaataCACTCTCTTTAaaaagatagctggacgtggtggggtgcacctgtggtcccagctacttggggg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6240449 715 - 8369475 -a-gctcctcatcctaattgactggcaagaggaaagggcttgccctctccagggaaaaaaatatttacttcagtcacttttgttctttacaatgtctagaatacagtatctagctagacacaatat-tggcat-aaaattaaaaattatgagatgcaaagaagcaggaaaatgtgatgcataatcaagag-aaaaaacaaccaatacatgcagattcttatatgactgagatgctggaattcacagataaggactttatgataattactataaatatgttaatgaaattagagc------atagacaaaatgataagaagatgaaga-----ttttt---------ttttttttttttt-ggtgacagaatttcactcttgtcgccagcagcagacaggagtgcaatggcatgatctcggctcactgcaacctccacctccc-ggttcaagcgattttcctgcctcagtctccccagtagctaggattacaggttcctgccaccacgcccagctaattttggtatttttagtagagatggggtttcactgtgttggccaggctggtcctgaactcctgacttcaggtgatccacctgtcttggcctcccaaagtgctgggattacaagcatgagatactgtgccaagccaacaagatgcagattttcaacagaaaaatACACTCTCTTTAaaaagatagctggacgtggtggtgtgcacctgtggtcccagctacttggtgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63835450 722 - 106955855 -a-gttcctcatcctaattgactggcaagaggaaagggcttgccctctccagggaaaaaaatatttacttcagtcactttggttctttacaatgtctagcatacagtatctggctagacacaatatctggcat-aaaattaaaaattgtgagatgcaaagaagcagg-aaatgtgacacataatcaagagaaaaaaacaatcaatacatacagattcttatatgattgagatgctggaattcacagataaggactttatgataattactataaatatgttaatgaaattagagcat-aaaatagacaaaaagataagaagatgaagacttgcttttt---------ttttttttttttt-tgagacagagtttcactcttgtcgcc-----cagacaggagtgcaatggcatgatctcggctcactgcaacctccacctcccaggttcaagccattctcctgcctcagcctccccagtagctaggattacaggttcctgccaccacgcccagctaattttggtatttttagtagagatggggtttcactatgttggcgaggctggtcttgaactcctgacttcaggtgatccacctatcttggcctcccaaagtgctgggattacaggcgtgagccactgtgccaagccaacaagatgcagattttcaacagaaaaataCACTCTCTTTAaaaagatagctggacatgctggtgtgcacctgtgatcccagctacttggggg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30143686 718 + 53671032 aa-gctcctcatcctaattgactggcaagaggaaagggcttgccctctccagga-aaaaaatatttacttcagtcactttggttctttacaatgtctagtgtacagtatctagctagacacaatatctggcat-aaaattaaaaattatgagatgca---aagcaggaaaatgtgattcgtaatcaagag-aaaaaacaatcgatatatgcagattcttacatgactgagatactggaatttgcagataaggactttatgataactactataagtatgttaatgaaattagagcgt-aaaatagacaaaatgataagaagat---ga-----ttttctttttcc--ttttttttttttt-tgagacagagtttcactcttgtcact-----caggctggagtgcaatggcatgatcttggctcactgcaacctccaactcccaggttcaagcgattctcctgcctcagtctccccagtagttaggattacacgttcctgccaccacgcctggttaattttgctatttttagtagagatggggtttcaccatgttggccaggctggtctcgaactcctgacttcaggtgatccacctgtcttggcctcccaaaatgctgggattacaggtgtgagccactgtgccgggccaacaagatgcagattttcaacagaaaaataCACTCTCTTTaaaaagataggtggacgtggtggtgtgcacccgtggtcccagctacttggggg i rheMac8.chr19 I 375 I 77 s macFas5.chr19 34596516 717 + 59248254 -a-gctcctcatcctaattgactggcaagaggaaagggcttgccctctccagga-aaaaaatatttacttcagtcactttggttctttacaatgtctagtgtacagtatctagctagacacaatatctggcat-aaaattaaaaattatgagatgca---aagcaggaaaatgtgattcgtaatcaagag-aaaaaacaatcgatatatgcagattcttacatgactgagatactggaatttgcagataaggactttatgataactactataagtatgttaatgaaattagagcgt-aaaatagacaaaatgataagaagat---ga-----ttttctttttcc--ttttttttttttt-tgagacagagtttcactcttgtcact-----caggctggagtgcaatggcatgatcttggctcactgcaacctccaactcccaggttcaagcgattctcctgcctcagtctccccagtagttaggattacacgttcctgccaccacgcctggttaattttgctatttttagtagagatggggtttcaccatgttggccaggctggtctcgaactcctgacttcaggtgatccacctgtcttggcctcccaaaatgctgggattacaggtgtgagccactgtgccgggccaacaagatgcagattttcaacagaaaaatACACTCTCTTTAaaaagataggtggacgtggtggtgtgcacccgtggtcccagctacttggggg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4464905 722 - 13342542 -a-gctcctcatcctaattgactggcaagaggaaagggcttgccctctccaggg-aaaaaatatttacttcagtcactttggttctttacaatgtctagtgtacagtatctagctagacacaatatctggcat-aaaatcaaaaattatgagatgaa---aagcaggaaaatgtgattcgtaatcaagag-aaaaaacaatcgatatatgcagattcttacatgactgagatactggaatttgcagataaggactttatgataactactataagtatgttaatgaaattagagcgt-aaaatagacaaaatgataagaagatgaaga-----ttttctttttccttttttttttttttt-tgagacagagtttcactcttgtcact-----caggctggagtgcaatggcatgatcttggctcactgcaacctccaactcccaggttcaagcgattctcctgcctcagtctccccagtagttaggattacacgttcctgccaccacgcctggttaattttgctatttttagtagagatggggtttcaccatgttggccaggctggtctcgaactcctgacttcaggtgatccacctgtcttggcctcccaaaatgctgggattacaggtgtgagccactgtgccgggccaacaagatgcagattttcaacagaaaaatACACTCTCTTTAaaaagataggtggacgtggtggtgtgcacccgtggtcccagctacttggggg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5395306 717 + 7714307 -a-gctcctcatcctaattgactggcaagaggaaagggcttgccctctccaagg-aaaaaatatttacttcagtcactttggttctttacaatgtctagcatacagtatctagctagacacaatatctggtat-aaaattaaaaattatgagatgca---aagcaggaaaatgtgattcgtaatcaagag-aaaaaacaatcgatatatgcagattcttacatgattgagatactggaatttgcagataaggactttatgataactactataagtatgttaatgaaattagagcgt-aaaatagacaaaatgataagaagatgaaga-----ttttctttttcc-----tttttttttt-tgagacagagtttcactcttgtcact-----caggctagagtgcaatggcatgatctcggctcactgcaacctccacctcccaggttcaagcgattctcctgcctcagtctccccagtacttaggattacacgttcctgcaaccacgcctggttaattttgctatttttagtagagatggggtttcaccatgttggccaggctggtctcgaactcctgacttcaggtgatccacctgtcttggcctcccaaaatgctgggattacaggtatgagccactgtgctgggccaacaagatgcagattttcaacagaaaaataCACTCTCTTTAaaaagataggtggacgtggtggtgtgcacccgtggtcccagctacttggggg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29203201 708 + 50890351 -a-gctcctcatcctaattgattggcaagaggaaagggcttgccctctccaggg-aaaaaatatttacttcagtcactttggttctttacaacgtctagcatacagtatctagctagacacaatatctggcat-aaaattaaaaattatgagatgca---aagcaggaaaatgtgattcataatcaagag-aaaaaacaatcaacatatgcagattcttacatgattgagatattggaatttgcagataaggactttatgataactactataagtatgttcatgaaattagagcgtcaaaacagacaaaatgatga-aagatgaaga-------------------ttttttttttttt-taagacagagtttcactcttgtcacc-----caggctggagtgcaatggcatgatcttggctcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagtctccccagtagttaggattacatgtttctgccaccacgcctggttaattttgctatttttagtagagatgggatttcaccatgttggccaggctggtctcgaactcctgacttcaggtgatccacctgtcttggcctcccaaagtgctgggattacacgtgtgagccactgtgccgggccaacaagatgcagattttcaacagaaaaatACACTCTCTTTAaaaagataggtggacgtggtggtgtgcacccgtggtcccagctacttggggg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 816592 721 - 2385121 -a-gctcctcatcctaattgactggcaagaggaaaaggcttgccctccccaggg-aaaaaatatttacttcagtcactttggttctttacaatgtctagcatacagtatctagctagacacaatatctggcat-aaaattaaaaattatgagatgca---aagcaggaaaatgtgattcgtaatcaagag-aaaaaacaatcgatatatgcagattcttacatgattgagatactggaatttgcagataaggactttatgataactactataagtatgttaatgaaattagagcgt-aaaatagacaaaatgataagaagatgaaga-----ttttctttttcc-tttttttttttttt-tgagacagagtttcactcttgtcact-----caggctggagtgcaatggcatgatcttggctcactgcaacctccacctcccaggttcaagcgattctcctgcctcagtctccccagtagttaggattacacgttcctgccaccacgcctggttaattttgctatttttagtagagatggggtttcaccatgttggccaggctggtctcgaactcctgacttcaggtgatccacctgtcttggcctcccaaaatgctgggattacaggtgtgagccactgtgccgggccaacaagatgcagattttcaacagaaaaataCACTCTCTTTAaaaagataggtggacgtggtggtgtgcacccgtggtcccagctacttggggg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2261798 721 + 4274983 -a-gctcctcatcctaattgactggcaagaggaaagggcttgccctctccaggg-aaaaaatatttacttcagtcactttggttctttacaatgtctagcatacagtatctagctagacacaatatctggcataaaaattaaaaattatgagatgca---aagcaggaaaatgtgattcataatcaagag-aaaaaacaatcgatatatgcagattcttacatgattgagatactggaatttgcagataaggactttatgataactactataagtatgttaatgaaattagagcat-aaaatagacaaaatgataataagaagaaga-----ttttctttttct--ttttttttttttt-tgagacagagtttcattcttgtcacc-----caggctggagtgcaattgcatgatcttggctcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagtctccccagtagttaggattacacgttcctgccaccacgcccagttaattttgctatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgacttcaggtgatccacctgtcttggcctcccaaagtgctgggattacaggtgtgagccactgtgccgggccaacaagattcagattttcaacagaaaaataCACTCTCTTTAaaaagatagctggacatggtggtgtgcacctgtggtcccagctacttggggg i colAng1.NW_012111697v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I e cebCap1.NW_016107633v1 1551662 784 - 2680843 I e saiBol1.JH378197 5336994 739 + 8899380 I e calJac3.chr22 28493749 931 + 49145316 I a score=495098.000000 s hg38.chr19_GL383574v1_alt 12619 102 + 155864 cgctgaggtgggaggatcccctgagcccaggaggttgaggctacagtgggctgcgctcgcaccctatactccatcctgggtgacagagcaaaagcctgtctc s panTro5.chr19 36071463 102 + 61309027 cgctgaggtgggaggatcccctgagcccaggaggttgaggctacagtgggctgcgctcgcaccctatactccatcctgggtgacagagcaaaagcctgtctc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39823631 102 + 64411610 cgctgaggtgggaggatcccctgagcccaggaggttgaggctacagtgggctgcgctcgcaccctatactccatcctgggtgacagagcaaaagcctgtctc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6241164 102 - 8369475 ggctgaggtgggaggatcccctgagcccaggaggttgaggctacagtgggctgcgctcgcaccctatactccatcctgggtgacagagcaaaagcctgtctc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63836172 101 - 106955855 -gctgaggtgggaggatcccctgagcccaggaggttgaggctgcagtaagctgagctcgcaccctatactccatcctgggtgacagagcaaaagcctgtctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34597233 101 + 59248254 -gctgaggtagcaggatcccctgagcccaggaggttgaggctgcagtgagctgagcttgcaccctgtactccaccctgggtgacagagcaaaagcctgtctc i macFas5.chr19 C 0 I 12 s macNem1.NW_012011689v1 4465627 101 - 13342542 -gctgaggtagcaggatcccctgagcccaggaggttgaggctgcagtgagctgagcttgcaccctgtactccaccctgggtgacagagcaaaagcctgtctc i macNem1.NW_012011689v1 C 0 I 12 s cerAty1.NW_012005268v1 5396023 101 + 7714307 -gctgaggtagcaggatcccctgagcccaggaggttgaggctgcagtgagctgagcttgcaccctgtactccatcctgggtgacagagcaaaagcctgtctc i cerAty1.NW_012005268v1 C 0 I 12 s chlSab2.chr6 29203909 101 + 50890351 -gctgaggtagcaggatctcctgagctcaggaggttgaggctgcagtgagctgagcttgcaccctgtactccatcctgggtgacagagcaaaagcctgtctc i chlSab2.chr6 C 0 I 12 s manLeu1.NW_012102454v1 817313 101 - 2385121 -gctgaggtagcaggatcccctgagcccaggaggttgaggctgcagtgagctgagcttgcaccctgtactccatcctgggtgacagagcaaaagcctgtctc i manLeu1.NW_012102454v1 C 0 I 12 s colAng1.NW_012111697v1 2262519 101 + 4274983 -gctgaggtgggaggatcccccgagcccaggaggttgaggctgcagtgagctgagcctgcaccctgtactccatcctgggtgacagagcaaaagcctgtctc i colAng1.NW_012111697v1 C 0 I 12 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I e cebCap1.NW_016107633v1 1551662 784 - 2680843 I e saiBol1.JH378197 5336994 739 + 8899380 I e calJac3.chr22 28493749 931 + 49145316 I e rheMac8.chr19 30144404 77 + 53671032 I a score=600897.000000 s hg38.chr19_GL383574v1_alt 12721 108 + 155864 aaaaaattaaaa-------aagagagaaaTCCATTAATCTGGGGATCAAGTGTACTAACACTAAGGTGAGATGCAATCTCAGGATAAGACTTTGGAGTATTGTTTACC----------ATATATA s panTro5.chr19 36071565 108 + 61309027 aaaaaatttaaa-------aagagagaaaTCCATTAATCTGGGGATCAAGTGTACTAACACTAAGGTGAGATGCAATCTCAGGATAAGACTTTGGAGTATTGTTTACC----------ATATATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39823733 108 + 64411610 aaaaaattaaaa-------aagagagaaaTCCATTAATCTGGGGATCAAGTGTACTAACACTAAGGTGAGATGCAATCTCAGGATAAGACTTTGGAGTATTGTTTACC----------ATATATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6241266 108 - 8369475 aaaaaattaaaa-------aagagagaaaTCCATTAATCTGGGGATCAAGTGTACTAACACTAAGGTGAGATGCAATCTCAGGATAAGACTTTGGAGTATTGCTTACC----------ATATATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63836273 125 - 106955855 aaaaaatttaaaaaaaattaaaaaTGAAATCCATTAATCTGGGGATCAAGTGTACTAACACTAAGGTGAGATGCAATTTCAGGATAAGACTTTGGAGTATTGTTTACCatatatatatatatata i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30144481 108 + 53671032 AAAAATTTAAAA-------AAGAGAGAAACTCATTAATCTGGGGATCAAGTGTACTAATACTAAGGTGAGATGCAATCTCAGGATAAGACTTTAGAGTATTGTTTACC----------atatata i rheMac8.chr19 I 77 C 0 s macFas5.chr19 34597346 108 + 59248254 AAAAATTTAAAA-------AAGAGAGAAACTCATTAATCTGGGGATCAAGTGTACTAATACTAAGGTGAGATGCAATCTCAGGATAAGACTTTAGAGTATTGTTTACC----------atatata i macFas5.chr19 I 12 C 0 s macNem1.NW_012011689v1 4465740 108 - 13342542 aaaaatttaaaa-------aagagagaaaCTCATTAATCTGGGGATCAAGTGTACTAATACTAAGGTGAGATGCAATCTCAGGATAAGACTTTAGAGTATTGTTTACc----------atatata i macNem1.NW_012011689v1 I 12 C 0 s cerAty1.NW_012005268v1 5396136 108 + 7714307 AAAAATTTAAAA-------AAGAGAGAAACTCATTAATCTGGGGATCAAGTGTACTAATACTAAGGTGAGATGCAATCTCTGGATAAGACTTTAGAGTATTGTTTACC----------atatata i cerAty1.NW_012005268v1 I 12 C 0 s chlSab2.chr6 29204022 108 + 50890351 TAAAATTTAAAA-------AAGAGAGAAACCCATTAATCTGGGGATCAAGTGTACTAATACTAAGGTGAGATGCAATCTCAGGATAAGACTTTAGAGTATTTTTTacc----------atagata i chlSab2.chr6 I 12 C 0 s manLeu1.NW_012102454v1 817426 108 - 2385121 aaaaatttaaaa-------aagaaagaaaCTCATTAATCTGGGGATCAAGTGTGCTAATACTAAGGTGAGATGCAATCTCAGGATAAGACTTTAGAGTATTGTTTACC----------atatata i manLeu1.NW_012102454v1 I 12 C 0 s colAng1.NW_012111697v1 2262632 108 + 4274983 aaaaatttaaaa-------aagagagaaaCCCATTAATCTGGGGATCCAGTGTACTAATACTAAGGTGAGATGCAACCTCAGGATAAGACTTTAGAGTATTGTTTACC----------atatata i colAng1.NW_012111697v1 I 12 I 147 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I e cebCap1.NW_016107633v1 1551662 784 - 2680843 I e saiBol1.JH378197 5336994 739 + 8899380 I e calJac3.chr22 28493749 931 + 49145316 I a score=13143.000000 s hg38.chr19_GL383574v1_alt 12829 3 + 155864 CAT s panTro5.chr19 36071673 3 + 61309027 CAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39823841 3 + 64411610 CAt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6241374 3 - 8369475 TAt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63836398 3 - 106955855 tat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30144589 3 + 53671032 cat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34597454 3 + 59248254 cat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4465848 3 - 13342542 cat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5396244 3 + 7714307 cat i cerAty1.NW_012005268v1 C 0 I 165 s chlSab2.chr6 29204130 3 + 50890351 cat i chlSab2.chr6 C 0 I 122 s manLeu1.NW_012102454v1 817534 3 - 2385121 cat i manLeu1.NW_012102454v1 C 0 I 99 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I e cebCap1.NW_016107633v1 1551662 784 - 2680843 I e saiBol1.JH378197 5336994 739 + 8899380 I e calJac3.chr22 28493749 931 + 49145316 I e colAng1.NW_012111697v1 2262740 147 + 4274983 I a score=-3901.000000 s hg38.chr19_GL383574v1_alt 12832 28 + 155864 ------------tttgtttgtttgtt-----------------------tgtttgtttgtttg s panTro5.chr19 36071676 28 + 61309027 ------------tttgtttgtttgtt-----------------------tgtttgtttgtttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39823844 24 + 64411610 ------------tttgtttgtttgtt-----------------------tgtttgtttg---- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6241377 28 - 8369475 ------------tttgtttgtttgtt-----------------------tgtttgttcatttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63836401 26 - 106955855 ------------tttttttttttttt-----------------------tttttttttatt-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30144592 57 + 53671032 atatatacaccatatatatataaaatatacacatatacacacacacacacatatatt------ i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34597457 55 + 59248254 atatatacaccatatatatataaaatatacacat--atacacacacacacatatatt------ i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4465851 57 - 13342542 atatatacaccatatatatataaaatatacacatacacacacacacacacaTATAtt------ i macNem1.NW_012011689v1 C 0 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e chlSab2.chr6 29204133 122 + 50890351 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I e cebCap1.NW_016107633v1 1551662 784 - 2680843 I e saiBol1.JH378197 5336994 739 + 8899380 I e calJac3.chr22 28493749 931 + 49145316 I e colAng1.NW_012111697v1 2262740 147 + 4274983 I e manLeu1.NW_012102454v1 817537 99 - 2385121 I e cerAty1.NW_012005268v1 5396247 165 + 7714307 I a score=1700.000000 s hg38.chr19_GL383574v1_alt 12860 3 + 155864 ttt s rheMac8.chr19 30144649 2 + 53671032 -tt i rheMac8.chr19 C 0 I 1 s macFas5.chr19 34597512 2 + 59248254 -tt i macFas5.chr19 C 0 I 1 s macNem1.NW_012011689v1 4465908 2 - 13342542 -tt i macNem1.NW_012011689v1 C 0 I 1 s manLeu1.NW_012102454v1 817636 2 - 2385121 -tt i manLeu1.NW_012102454v1 I 99 I 1 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e chlSab2.chr6 29204133 122 + 50890351 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I e cebCap1.NW_016107633v1 1551662 784 - 2680843 I e saiBol1.JH378197 5336994 739 + 8899380 I e calJac3.chr22 28493749 931 + 49145316 I e colAng1.NW_012111697v1 2262740 147 + 4274983 I e cerAty1.NW_012005268v1 5396247 165 + 7714307 I e nomLeu3.chr10 63836427 0 - 106955855 C e gorGor5.CYUI01015150v1 6241405 0 - 8369475 C e panPan2.chr19 39823868 0 + 64411610 C e panTro5.chr19 36071704 0 + 61309027 C a score=1412038.000000 s hg38.chr19_GL383574v1_alt 12863 249 + 155864 gaaacggagtctggctctgtcacccaggctggagtgcagtggcgccatctcggctccctgcagctccctgcttcccaggttcaagtgattctcgggcctcagcctcctgagtaactgggataacaggtgtgtgccaccatgccctgctaa-ttttttgtattttt-------acagtatctcattgtgttggccaggctggtcttgaactcctgacctcaagtgatctgcctgcctcggcctcccaaagtgctggga s panTro5.chr19 36071704 248 + 61309027 -aaacggagtctggctctgtcacccaggctggagtgcagtggcgccatctcggctccctgcagttccctgcttcccaggttcaagtgattctcgggcctcagcctcctgagtaactgggataacaggtgtgtgccaccatgccctgctaa-ttttttgtattttt-------acagtatctcattgtgttggccaggctggtcttgaactcctgacctcaagtgatctgcctgcctcggcctcccaaagtgctggga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39823868 248 + 64411610 -aaacggagtctggctctgtcacccaggctggagtgcagtggcgccatctcggctccctgcagttccctgcttcccaggttcaagtgattctcgggcctcagcctcctgagtaactgggataacaggtgtgtgccaccatgccctgctaa-ttttttgtattttt-------acagtatctcattgtgttggccaggctggtcttgaactcctgatctcaagtgatctgcctgcctcggcctcccaaagtgctggga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6241405 255 - 8369475 -aaacggagtctggctctgtcacccaagctggagtgcagtggcgccatctcagctccctgcagctccctgcttcccaggttcaagtgattctcgggcctcagcctcctgagtaactgggattacaggtgtgtgccaccatgccctgctaa-ttttttgtatttttagtagagacagggtctcattgtgttggccaggctggtcttgaactcctgacctcaagtgatctgcctgcctcggcctcccaaagtgctggga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63836427 255 - 106955855 -aaacggagtctggctctgtcacccaagctggaatgcagtggcgccatcttggctccctgcagctccctgcttcccaggttcaagtgattctcgtgcctcagcctcctggataactgggattacaggtgtgtgccatcatgccctgctaa-ttttttgtatttttagtagagacaaggtctcattgtgttggctaggctggtcttgaactcctgatctcaagtgatctgtctgcctcggcctcccaaagtgctggga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30144652 257 + 53671032 gaaatggagtcttgctctgtcacccaggctagagtgtagtggcgccatctcagctcactgcagccccctgcttcccaggttcaagtgattctcgtgcctcagcctcctgagaagctgggattacaggtgtgtgtcaccacaccctgctaatttttttgtgtttttagtagagacagggtctcattgtgttggccaggctggtctcaaacccctgatctcaagtaagctgcgtgcctcggcctcccaaagtgctggga i rheMac8.chr19 I 1 C 0 s macFas5.chr19 34597515 257 + 59248254 gaaacggagtcttgctctgtcacccaggctagagtgtagtggcaccatctcagctcactgcagccccctgcttcccaggttcaagtgattctcgtgcctcagcctcctgagaagctgggattacaggtgtgtgtcaccacaccctgctaatttttttgtgtttttagtagagacagggtctcattgtgttggccaggctggtctcaaacccctgatctcaagtaagctgcgtgcctcggcctcccaaagtgctggga i macFas5.chr19 I 1 C 0 s macNem1.NW_012011689v1 4465911 256 - 13342542 gaaacggagtcttgctctgtcacccaggctagagtgtagtggcgccatctcagctcactgcagtcccctgcttcccaggttcaagtgattctcgtgcctcagcctcctgagaagctgggattacaggtgtgtgtcaccacaccctgctaa-ttttttgtgtttttagtagagacagggtctcattgtgttggccaggctggtctcaaacccctgacctcaagtgatctgcgtgcctcggcctcccaaagtgctggga i macNem1.NW_012011689v1 I 1 C 0 s cerAty1.NW_012005268v1 5396412 256 + 7714307 gaaacggagtcttgctctgtcacccaggctagagtgtagtggcgccatctcagctcactgcagctccctgcttcccaggttcaagtgattctcgtgcctcagcctcctgagaagctgggattacaggtgtgtgtcaccacaccctgctaa-ttttttgtgtttttagtagagacagggtctcattgtgttggccaggctggtctcaaacccctggcctcaagtgatctgcgtgcctcggcctcccaaagtgctggga i cerAty1.NW_012005268v1 I 165 C 0 s chlSab2.chr6 29204255 256 + 50890351 gaaacggagtcttgctctgtcacccaggctagagtgtagtggcgccatctgggctcactgcagccccctgcttcccaggttcaagtgattctcgtgcctcagcctcctaagaagctgggattacaggtgtgtgtcaccacaccctgctaa-ttttttgtgtttttagtagagacagggtctcattgtgttggccaggctggtctcaaacccctgacctcaagtgatcttcgtgcctcggcctcccaaagtgctggga i chlSab2.chr6 I 122 C 0 s manLeu1.NW_012102454v1 817639 255 - 2385121 gaaacagagtcttgctctgtcacccaggctagagtgtagtggcgccatctcagctcactgcagccccctgcttcccaggttcaagtgattctcgtgcctcagcctcctgagaagctgggattacaggcgtgtgtcaccacgccctgctaa-ttttttgtgtttttagtagagacagggtctcattgtgttggccaggctggtctcaaacccctgacctcaagtgatctgcgtccctcggcctcccaaagtgct-gga i manLeu1.NW_012102454v1 I 1 C 0 s colAng1.NW_012111697v1 2262887 256 + 4274983 gaaacggagtcttgctctgtcacccaggctagagtatagtggcgccatctcggctcactgcagccccctgcttcccaggttcaagtgattctcgtgcctcagcttcctgagaagctgggattacaggtgtgtgtcaccacaccctgctaa-ttttttgtgtttttagtagagacagggtctcattgtgttggccaggctggtctcaaacccctgacctcaagtgatctgcgtgcctcagcctcccaaagtgctggga i colAng1.NW_012111697v1 I 147 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I e cebCap1.NW_016107633v1 1551662 784 - 2680843 I e saiBol1.JH378197 5336994 739 + 8899380 I e calJac3.chr22 28493749 931 + 49145316 I a score=22509.000000 s hg38.chr19_GL383574v1_alt 13112 3 + 155864 ttg s panTro5.chr19 36071952 3 + 61309027 ttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39824116 3 + 64411610 ttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6241660 3 - 8369475 ttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63836682 3 - 106955855 ttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30144909 3 + 53671032 ttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34597772 3 + 59248254 ttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4466167 3 - 13342542 ttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5396668 3 + 7714307 ttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29204511 3 + 50890351 ttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 817894 3 - 2385121 ttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2263143 3 + 4274983 ttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28494680 3 + 49145316 TTA i calJac3.chr22 I 931 C 0 s saiBol1.JH378197 5337733 3 + 8899380 ttA i saiBol1.JH378197 I 739 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I e cebCap1.NW_016107633v1 1551662 784 - 2680843 I a score=612384.000000 s hg38.chr19_GL383574v1_alt 13115 76 + 155864 caggcataggccaccacgcccagtcACTATATCTAATTTTTACTGGTttccagaaagaactaatcgtgctgttcca s panTro5.chr19 36071955 76 + 61309027 caggcataggccaccacgcccagtcACTATATCTAATTTTTACTGGTttccagaaagaactaatcgtgctgttcca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39824119 76 + 64411610 caggcataggccaccacgcccagtcACTATATCTAATTTTTACTGGTttccagaaagaactaatcgtgctgttcca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6241663 76 - 8369475 caggcatgggccaccacgcctagtcACTATATCTGATTTTTACTGGTttccagaaagaactaatcgtgctgttcca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63836685 76 - 106955855 cagggatgagccaccacgcccACTCACTATATCTAATTTTTACTGGcttccagaaagaactcatcatgctgttcca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30144912 76 + 53671032 caggcatgggccaccacgcccagGCACTACCTCTAATTTTTACTGGCTTCCAGAAATAACTCATCATGCTGTTCCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34597775 76 + 59248254 caggcatgggccaccacgcccagGCACTACCTCTAATTTTTACTGGcttccagaaataactcatcatgctgttcca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4466170 76 - 13342542 caggcatgggccaccacgcccagGCACTACCTCTAATTTTTACTGGCTTCCAGAAATAACTCATCATGCTGTTCCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5396671 76 + 7714307 caggcatgggccaccacgcccagGCACTACCTCTAAGTTTTACTGGCTTCCAGAAATAACTCATCATGCTGTTCCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29204514 76 + 50890351 caggcatgggccaccacgcccagGCACTACCTCTAATTTTTACTGGCTTCCAGAAATAACTCATCATGCTGTTCCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 817897 76 - 2385121 caggcatgggccaccacgcccagGCACTACCTCTAATTTTTACTGGCTTCCAGAAATAACTCATCATGCTGTTCCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2263146 76 + 4274983 caggcatgggccaccacgcccagGCACTACCTCTAATTTTTACTGGCTTCTGGAAATAACTCATCATGCTGTTCCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28494683 75 + 49145316 CAGGCATGAGCCACTACGCCCAGCCACTACACCTAATTTTTACTGACTTCCGGAAAGAACTCATTA-GCTGTTGCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5337736 75 + 8899380 CAGGCATGAGCCAACATGCCCAGCCACTACACCTAATTTTTACTGACCTCCGTAAAGAACTCATCA-GCTGTTGCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1552446 75 - 2680843 CAGGCATGAGCCACCATGCCCAGCCACTACACCTAATTTTTACTGACTTCTGGAAAGAACTCATCA-GCTGTTGCG i cebCap1.NW_016107633v1 I 784 C 0 e dasNov3.JH563638 253361 47 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I a score=2333057.000000 s hg38.chr19_GL383574v1_alt 13191 262 + 155864 agaagtg--aagttagccaacaggatcta----cttcctctttca---------------------atccaag----gccacgctcctcccagacaaccccagccaacgacagaacacaacaggggtactagggcctaaccattt---------------ctgttccaaagagccatcttcactccagggcttcctgttgggttggccaaga-cgttgtcagatctgcagtacggtctggggctctccctgctcaatcctgcttcttctccgttttacctttctcaggcattacctccaataaacctct s panTro5.chr19 36072031 262 + 61309027 agaagtg--aagttagccaacaggatcta----cttcctctttca---------------------atccaag----gccacgctcctcccagacaaccccagccaacgacagaacacagcaggggtactagggcctaaccattt---------------ctgttccaaagagccatcttcactccagggcttcctgttgggttggccaaga-cgttgtcagatctgcagtacggtctggggctctccctgctcaatcctgcttcttctccgttttacctttcccaggcattacctccaataaacctct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39824195 262 + 64411610 agaagtg--aagttagccaacaggatcta----cttcctctttca---------------------atccaag----gccacgctcctcccagacaaccccagccaacgacagaacacagcaggggtactagggcctaaccattt---------------ctgttccaaagagccatcttcgctccagggcttcctgttgggttggccaaga-cgttgtcagatctgcagtacggtctggggctctccctgctcaatcctgcttcttctccgttttacctttcccaggcattacctccaataaacctct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6241739 261 - 8369475 agaagtg--aagttagccaaca-gatcta----cttcctctttca---------------------atccaag----gccatgctcctcccagacaaccccagccaacgacagaatacagcaggggtactagggcctaaccattt---------------ctgttccaaagagccatctttgctccagggcttcctgttgggttggccaaga-cgttgtcagatctgcagtacggcctggggctctccctgctcaatcctgcttcttctccgttttacctttcccaggcattacctccaataaacctct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63836761 262 - 106955855 aaaagtg--aagttagccaacagaatcta----cttcctctttca---------------------atccgag----tccacgctcctcccagacaatcccagccaacgacagaacacagcaggggtactagggcctaaccattt---------------ctgttccaaagagccatctttgctccagggcttcctgttgggttggccaaga-cgttgtcagatctgcagtacagtctggggctctccctgctcaatcctgcttcttctccgttttacctttcccaggcattacctccaataaacctct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30144988 262 + 53671032 AGAAGTG--AAGTTAGCCAAcaggatcta----cttccgctttca---------------------atccaag----tccatgctcctcccaggcaaccccagccaacgacagaacacagcaggggtattagggcctaactattt---------------ctgttccaaagagccatctttgctccagggcttcctgttgggttggccaaga-cgttgtcagatctgcagtacagtctggggctctcccagctcaatcctgcttcttctcccttttacctttcccaggcattacctccaataaacctct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34597851 262 + 59248254 agaagtg--aagttagccaacaggatcta----cttccgctttca---------------------atccaag----tccatgctcctcccaggcaaccccagccaacgacagaacacagcaggggtattagggcctaactattt---------------ctgttccaaagagccatctttgctccagggcttcctgttgggttggccaaga-cgttgtcagatctgcagtacagtctggggctctcccagctcaatcctgcttcttctcccttttacctttcccaggcattacctccaataaacctct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4466246 262 - 13342542 AGAAGTG--AAGTTAGCCAAcaggatcta----cttccgctttca---------------------atccaag----tccatgctcctcccaggcaaccccagccaacgacagaacacagcaggggtattagggcctaactattt---------------ctgtcccaaagagccatctttgctccagggcttcctgttgggttggccaaga-tgttgtcagatctgcagtacagtctggggctctcccagctcaatcctgcttcttctcccttttacctttcccaggcattacctccaataaacctct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5396747 262 + 7714307 AGAAGTG--AAGTTAGCCAAcaggatcta----cttccgctttca---------------------atccaag----tccatgctcctcccaggcaaccccagccaatgacagaacacagcaggagtattagggcctaaccattt---------------ctgttccaaagagccatctttgctccagggcttcctgttgggttggccaaga-cgttgtcagatctgcagtacagtctggggctctccctgctcaatcctgcttcttctcccttttacctttcccaggcattacctccaataaacctct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29204590 262 + 50890351 AGAAGTG--AAGTTAGCCAAcaggatcta----cttccgcttgca---------------------atcccag----tccatgctcctcccaggcaaccccagccaatgacagaacacagcaggggtattagggcctaaccattt---------------ctgttccaaagagccatctttgctccagggcttcctgttgggttggccaaga-cgttgtcagatctgcagtacagtctggggctctcgctgctcaatcctgcttcttctcccttttacctttcccaggcatgacctccaataaacctct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 817973 262 - 2385121 AGAAGTG--AAGTTAGCCAAcaggatcta----cttccgctttca---------------------atccaag----tccatgctcctcccaggcaaccccagccaacgacagaacacagcaggggtattagggcctaactattt---------------ctgttccaaagagccatctttgctccagggcttcctgttgggttggccaaga-cgttgtcagatctgcagtacagtctggggctctccctgctcaatcctgcttcttctcccttttacctttcccaggcattacctccaataaacctct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2263222 262 + 4274983 AGAAGTG--AAGTTAGCCAAcaggatcta----cttccactttca---------------------atccaag----tccatgctcctcccaggcaaccccagccaacgacagaacacagcaggggtattagggcctaaccattt---------------ccgttccaaagagccatctttgctccagggcttcctgttgggttggccaaga-tgttgtcagatctgcagtacagtctggggctctccctgctcaatcttgcttcttctcccttttacctttcccagacattacctctaataaacctct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28494758 249 + 49145316 AGAAGTGAAAAAGTAGCCAAcaagattta----cttctgccttca---------------------atccaag----tccatgctcct-ccaggcaaccccacccaatgacagaacacagcgggggtatgaaggcctaaccatttctgaccaatgcatgactgttccagagagcaatctttgctccagggctt-ctgttaggttggccaaga-tgttgtcagatctgcagcacagtct-gggctctccctgctcaatcctgcttcttctcc---------------------------aataaacctct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5337811 254 + 8899380 AGAAGTGAAAAAGTAGCCAACGAAattta----cttccgccttca---------------------atccaagtacttcaatgctcct-ccaggcaaccccacccaatgacagaacacagcaggggtatgagggcctaaccatttctgaccaatacaggactgctccaaagagcaatctttgctccagggctt-ctgttaggttggccaagattgttgtgagatctgcagcacagtct-gggctctccctgctcaatcctgcttctcctcc---------------------------aataaacctct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1552521 253 - 2680843 AGAAGTGAAAAAGTAGCCAAcaagattta----cttccgccttca---------------------atccaagtccttcaatgctcct-ccaggcaaccccacccaatgacagaacacagcagaggtatgagggcctaaccatttccgaccaatgcaggactgttccaaagagcaatctttgctccagggctt-ctgttaggttggccaaga-tgttgtgagatctgcagcacagtct-gggctctccatgctcaatcctgcttcttctcc---------------------------aataaacctct i cebCap1.NW_016107633v1 C 0 C 0 s dasNov3.JH563638 253408 302 + 643850 agaagtg--cagttagcagacagcctctagctgtttgcaccttcaggatggatcctgacaggttggaatcgag----accatgctcttcctgggcagcctcagccaatgacagagcatagcagaggtaccacggcctggccatttctgtccaatgcagcactattgtaatgagcaatttttgctctagagttccctattgagttggctaaga-ctttgtcagatctgcaatacactctggggctctccctgctcaaccctgcttcttctcccttttacctttcgtaggcattaccTTGTGTGTGTAtgt i dasNov3.JH563638 I 47 I 412 e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I a score=2961445.000000 s hg38.chr19_GL383574v1_alt 13453 357 + 155864 taactctggctcagcatctaattctgagaagaaccaacagacacaCATGGCTTTAGAACTCAACCTGTGGACTGGCCTCCCAAAGTgcctgtaatcccagcactttgggaggccgaggcatgtggatcacttgaggtcaggagctccagaccagcctggccaacatggtgaaaacccgtctctactaaaaatacaaaaattaggtgggtgtggtggtgcatgcctgtaatcccagctacttgggaggctgaagcacgagaatcgcttgaacccaggaggtgtaggttgcaatgagccgagatcatgccactgcaccccagcctgggccatagagtgagaccctgtctcaaaaa-g--aaa s panTro5.chr19 36072293 357 + 61309027 taactctggctcagcatctaattctgagaagaaccaacagacacaCATGGCTTTAGAACTCAACCTGTGGACTGGCCTCCCAAAGTgcctgtaatcccagcactttgggaggccgaggcatgtggatcacttgaggtcaggagctccagaccagcctggccaacatggtgaaaacccgtctctacacaaaatacaaaaattaggtgggtgtggtggtgcatgcctgtaatcccagctacttgggaggctgaggcacgagaatcgcttgaacccaggaggtgtaggttgcaatgagccgagatcatgccactgcaccccagcctgggccatagagcgagaccctgtctcaaaaa-g--aaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39824457 357 + 64411610 taactctggctcagcatctaattctgagaagaaccaacagacacaCATGGCTTTAGAACTCAACCTGTGGACTGGCCTCCCAAAGTgcctgtaatcccagcactttgggaggccgaggcatgtggatcacttgaggtcaggagctccagaccagcctggccaacatggtgaaaacccgtctctacaaaaaatacaaaaattaggtgggtgtggtggtgcatgcctgtaatcccagctacttgggaggctgaggcacgagaatcgcttgaacccaggaggtgtaggttgcaatgagccgagatcatgccactgcaccccagcctgggccatagagcgagaccctgtctcaaaaa-g--aaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6242000 357 - 8369475 taactctggctcagcatctaattctgagaagaaccaacagacacaTATGGCTTTAGAACTCAACCTGTGGACTGGCCTCCCAAAGTgcctgtaatcccagcactttgggaggctgaggcatgtggatcacttgaggtcaggagctccagaccagcctggccaacatggtgaaaacccgtctctactaaaaatacaaaaattaggtgggtgtggtggtgcatgcctgtaatcccagctacttgggaggctgaggcacgagaatcgcttgaacccaggaggtgtaggttgcaatgagccgagatcatgccactgcaccccagccagggccatagagcgagaccctgtctcaaaaa-g--aaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63837023 358 - 106955855 taactctggctcagcatctatttctgagaagaaccaacagacacaCATGGCTTTAGAACTCAACCTGTGGACTGGCCTCCCAAAGTgcctgtaatcccagcactttgggaggccgaggcaggtggatcatttgaggtcaggagttccagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattaggttggcgtggtggtgcatgcctgtaatcccagctacttgggaggctgaggcgcgagaatcacttgaacccaggaggtgtacgttgcaatgagccgagatcatgccactgcaatccagcctgggccacagagcgagaccctgtttcaaaaagg--aaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30145250 358 + 53671032 taactctggctcagcatctatttctgagaagaaccaatagacacaCATGGCTTTAGAACTCAACCTGTGGACTGGCCTCCCAAAGCGCTGGGATTACAGgcactttgggaggccgaggctggcggatcacttgaggtcaggagttccagactagcctggccaacatggtgaaaccacatctccactaaaaacacaaaaattaggtgggcgtggtggtgcatacctgtaatcccagctacttgggaggctgaggcacaagaatcgcttgaaccaaggaggtgtaggttgcaatgagccaagatcatgccactgcactccagcctgggccacagagtgagaccctgtcccaaaaa-g-aaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34598113 358 + 59248254 taactctggctcagcatctatttctgagaagaaccaatagacacaCATGGCTTTAGAACTCAACCTGTGGACTggcctcccaaagcgctgggattacaggcactttgggaggccgaggctggcggatcacttgaggtcaggagttccagactagcctggccaacatggtgaaaccacatctccactaaaaatacaaaaattaggtgggcgtggtggtgcatacctgtaatcccagctacttgggaggctgaggcacaagaatcgcttgaaccaaggaggtgtaggttgcaatgagccaagatcatgccactgcactccagcctgggccacagagtgagaccctgtcccaaaaa-g-aaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4466508 358 - 13342542 taactctggctcagcatctatttctgagaagaaccaatagacacaCATGGCTTTAGAACTCAAAATGTGGACTGGCCTCCCAAAGCGCTGGGATTACAGgcactttgggaggccgaggctggcggatcacttgaggtcaggagttccagactagcctggccaacatggtgaaaccacatctccactaaaaatacaaaaattaggtgggcgtggtggtgcatacctgtaatcccagctacttgggaggctgaggcacaagaattgcttgaaccaaggaggtgtaggttgcaatgagccaagatcatgccactgcactccagcctgggccacagagtgagaccctgtcccaaaaa-g-aaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5397009 358 + 7714307 taactctggctcagcatctatttctgagaagaaccaacagacacaCATGGCTTTAGAACTCAACCTGTGGACTggcctcccaaagtgctgggattacaggcactttgggaggccgaggctggcggatcacttgaggtcaggagttccagactagcctggccaacatggtgaaaccacatctccactaaaaatacaaaaattaggtgggcgtggtggtgcatacctgtaatcccagctacttgggaggctgaggcacaagaatcgcttgaaccaaggaggtgtaggttgcaatgagccaagatcatgccactgcactccagcctgggccacaaagtgagaccctgtctcaaaaa-g-aaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29204852 356 + 50890351 taactctggctcagcatctatttctgagaagaaccaacagacacaCATGGTTTTAGAACTCAACCTGTGGACTGGCCTCCCAAAGCGCTGGGATTACAGgcactttgggaggccgaggctggcagatcacttgaggtcaggagttccagatgagcctggccaacatggtgaaaccacatctccactaaaaatacaaaaattaggtgggcgtggtggtgcatacctgtaatcccagctacttgggaggctgaggcacaagaatcgcttgaaccaaggaggtgtaggttgcaatgagccgagatcatgccactgca-tccagcccgggccatagagtgagaccctgtctcaaaaa-g--aaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 818235 358 - 2385121 taactctggctcagcatctatttctgagaagaaccaatagacacaCATGGCTTTAGAACTCAACCTGTGGACTGGCCTCCCAAAGCGCTGGGATTACAGgcactttgggaggccgaggctggcggatcacttcaggtcaggagttccagactagcctggccaacatggtgaaaccacatctccactaaaaatacaaaaattaggtgggcgtggtggtgcatacctgtaatcccagctacttgggaggctgaggcacaagaatcgcttgaaccaaggaggtgtaggttgcaatgagccaagatcatgccactgcactccagcctgggccacagagtgagaccctgtctcaaaaa-g-aaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2263484 358 + 4274983 taactctggctcagcatctatttctgagaagaaccaacagacacaCATGGCTTTAGAACTCAACCTGTGGACTggcctcccaaagtgctgggattacaggcactttgggaggctgaggctggtggatcacttgaggtcaggagttccagactagcctggccaacatggtgaaaccacatccccactaaaaatacaaaacttaggtgggcgtggtggttcatacctgtaatcccagctacttgggaggctgaggcacaggaatcgcttgaaccaaggaggtggaggttgcaatgagccgagatcatgccactgcactccagcctgggccatagagtgagaccctgtctcaaaaa-g-aaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28495007 339 + 49145316 taactctggctcagcatctccttctgagaagaaccaatggacacaCATGGCTTTAGAACTCAGCCTTTGGGCCAGCCACCCAAAGAgcctgtaatcccagcactttgggaggccaaggcagatggatgtcttgaggtcaggagttccagaccagcctggccaacaaggtgaaactccatctctactaaaaatacaaaaatgaggtgggcgtggtggtacacacctgtaatctcagctactcagaaggctgagggatgagaatcgcttgaatccaagaggtgtaggttgcaatgagctgagatcatgccactgcactccagcctgggcaatacagcaag---------------------a i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5338065 351 + 8899380 taactctggctcagcatctccttctgagaagaaccaatggacacGCATGGCTTTAGAACTCAGCCTTTGGACCAGCCACCCAAAGAgcctgtaaccccagaactttggcaggccaaggcagatggatgccttgaggtcaggagttccaga-----ctggccaacgtggtaaaaccccatctctactgaaaacagaaaaatgaggtgggcatggtggtgcacgcctgtaatcccagctattcaggaggctga-ggatgagaattgcttgaacccaagaggtgcaggttgcaatgagctgagatcatgccactgcactccagcctgggcaatacagcaagacactgtctcagaaa-g--aaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1552774 358 - 2680843 taactctggctcagcatctcc-tctgggaagaaccaatagacacaCATGGCTTTAGAACTCAGCCTTTGGGCCAGCCACCCAAAAAgcctgtaatcccagcactttgggaggccaaggcagatggatgccttgaggtcaggagttccagaccagcgtggccaatgtagtaaaacaccatctctactaaaaatacaaaaatgaggtgggtgtggtggtgcacacctttaatcccagctactcaggaggctcagggacgagaatcgcttgaacccaagaggtgtaggttgcaatgagcggagatcacgccactgcactccagcctgggcgatacagcaagaccctgtctcagaaa-gaaaaa i cebCap1.NW_016107633v1 C 0 C 0 e dasNov3.JH563638 253710 412 + 643850 I e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I a score=660551.000000 s hg38.chr19_GL383574v1_alt 13810 75 + 155864 aaaaTTCAAC-CTGTGT-AAGATGTGTCTCCTCCAATGTGTGTAAGATGACTGACCCAAT-ACCAAGCACAAAGTAGA s panTro5.chr19 36072650 75 + 61309027 aaaaTTCAAC-CTGTGT-AAGATGTGTCTCCTCCAATGTGTGTAAGATGACTGACCCAAT-ACCAAGCACAAAGTAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39824814 75 + 64411610 aaaaTTCAAC-CTGTGT-AAGATGTGTCTCCTCCAATGTGTGTAAGATGACTGACCCAAT-ACCAAGCACAAAGTAGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6242357 75 - 8369475 aaaaCTCAGC-CTGTGT-AAGATGTGTCTCCTCCACTGTGTGTAAGATGACTGACCCAAT-ACCAAGCACAAAGTAGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63837381 75 - 106955855 aaaaCTCAAC-CTGTGT-AAGATGTGTCTCCTCCAATGTGTGTAAGATGACTGACCCAAT-ACCAGGCACAAAGCAGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30145608 77 + 53671032 aaaaCTCAAC-CTGTGTCAAGATGTGTCTCCTCCAATATGTGTAAGATGACTGACCCAACAACCAGGCACAAAGTAGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34598471 77 + 59248254 aaaaCTCAAC-CTGTGTCAAGATGTGTCTCCTCCAATATGTGTAAGATGACTGACCCAACAACCAGGCACAAAGTAGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4466866 77 - 13342542 aaaaCTCAAC-CTGTGTCAAGATGTGTCTCCTCCAATATGTGTAAGATGACTGACCCAACAACCAGGCACAAAGTAGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5397367 77 + 7714307 aaaaCTCAAC-CTGTGTTAAGATGTGTCTCCTCCAATGTGTGTAAGATGACTGACCCAACAACCAGGCACAAAGTAGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29205208 77 + 50890351 aaaaTTAAAC-CTGTGTTAAGATGTGTCTCCTCCAATGTGTGTAAGATGACTGACCCAACAACCAGGCACAAAGTAGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 818593 77 - 2385121 aaaaCTCAAC-CTGTGTCAAGATGTGTCTCCTCCAATATGTGTAAGATGACTGACCCAACAACCAGGCACAAAGTAGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2263842 77 + 4274983 aaaaCTCAAC-CTGTGTTAAGATGTGTCTCCTCCAATGTGTGTAAGATGACTGACCCAATAACCAGGCATAAAGTAGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28495346 75 + 49145316 AAAAAAAAAC-CTACCT-AAGATGTGTTTCCTCCAATGTGTATAAGATGACTGACCCAAT-ACCAGGCACAAAGTAGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5338416 75 + 8899380 aaaaaaaaaa-CTTTGT-AAGATGTGTCTCCTCCAATGTGTGTAAGATGACTGACCCAAT-ACCAGGTACAAAGTAGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1553132 75 - 2680843 aaaaaaaaaC-CTACGT-AAGATGTGTCTCCTCCAATGTGTGTAAGATGACTGACCCAAT-ACCAGGTACAAAGTAGA i cebCap1.NW_016107633v1 C 0 I 151 s dasNov3.JH563638 254122 68 + 643850 AGAACCCAGCACTGTTT-AAGATGTGACTCCTTCACTCTATGTTAAATAACT---------ACCTGGCACAAAGTAGG i dasNov3.JH563638 I 412 C 0 e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I a score=21312.000000 s hg38.chr19_GL383574v1_alt 13885 3 + 155864 CTT s panTro5.chr19 36072725 3 + 61309027 CTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39824889 3 + 64411610 CTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6242432 3 - 8369475 TTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63837456 3 - 106955855 CTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30145685 3 + 53671032 CTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34598548 3 + 59248254 CTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4466943 3 - 13342542 CTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5397444 3 + 7714307 CTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29205285 3 + 50890351 CTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 818670 3 - 2385121 CTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2263919 3 + 4274983 CTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28495421 3 + 49145316 TTT i calJac3.chr22 C 0 I 141 s saiBol1.JH378197 5338491 3 + 8899380 TTT i saiBol1.JH378197 C 0 I 148 e dasNov3.JH563638 254190 0 + 643850 C e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I e cebCap1.NW_016107633v1 1553207 151 - 2680843 I a score=20145.000000 s hg38.chr19_GL383574v1_alt 13888 25 + 155864 TGTGTACTTTACAAAGTATACAATA s panTro5.chr19 36072728 25 + 61309027 TGTGTACTTTACAAAGTATACAATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39824892 25 + 64411610 TGTGTACTTTACAAAGTATACAATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6242435 25 - 8369475 TGTGTACTTTACAAAGTATACAATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63837459 25 - 106955855 TGTGTACTTTACAAAGTATACAATA i nomLeu3.chr10 C 0 C 0 s dasNov3.JH563638 254190 1 + 643850 ------------------------A i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e chlSab2.chr6 29205288 0 + 50890351 C e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I e cebCap1.NW_016107633v1 1553207 151 - 2680843 I e saiBol1.JH378197 5338494 148 + 8899380 I e calJac3.chr22 28495424 141 + 49145316 I e colAng1.NW_012111697v1 2263922 0 + 4274983 C e manLeu1.NW_012102454v1 818673 0 - 2385121 C e cerAty1.NW_012005268v1 5397447 0 + 7714307 C e macNem1.NW_012011689v1 4466946 0 - 13342542 C e macFas5.chr19 34598551 0 + 59248254 C e rheMac8.chr19 30145688 0 + 53671032 C a score=44055.000000 s hg38.chr19_GL383574v1_alt 13913 6 + 155864 CCAGTA s panTro5.chr19 36072753 6 + 61309027 CCAGTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39824917 6 + 64411610 CCAGTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6242460 6 - 8369475 CCAGCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63837484 6 - 106955855 CCAGTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30145688 6 + 53671032 CCAGTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34598551 6 + 59248254 CCAGTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4466946 6 - 13342542 CCAGTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5397447 6 + 7714307 CCAGTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29205288 6 + 50890351 CCAGTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 818673 6 - 2385121 CCAGTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2263922 6 + 4274983 CCAGTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28495565 6 + 49145316 ccggcT i calJac3.chr22 I 141 C 0 s saiBol1.JH378197 5338642 6 + 8899380 ccagcT i saiBol1.JH378197 I 148 C 0 s dasNov3.JH563638 254191 6 + 643850 TCAGTG i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 300967 345 - 4471408 I e cebCap1.NW_016107633v1 1553207 151 - 2680843 I a score=3735397.000000 s hg38.chr19_GL383574v1_alt 13919 355 + 155864 GATGTTAGATATCTTTGCCTTTTGCATCATTTAGGATATGTGTTTGCTGGTCAGGAGAGACTCAAAATAACACTGCCACAAAT--------------------------------------AGTGTCACAAAATTcctggacttctagctgatcctgt-gaaatagtcagataagtgagtaaagccatcttggaccctctagaccaggcaagctgcc-ctcaatgattccagttgaggctacacggaactgaa--ttgcttagtcaag-------------cctgatccatgaaattgagaggtataataaagtgataattgttttaagtcactgaatttgggggtggttcct-------------ataaacagaacacatctcctaactaatacaGAGAC-AAAAACTTACCTTAAAAGTTTA s panTro5.chr19 36072759 355 + 61309027 GATGTTAGGTATCTTTGCCTTTTGCATCATTTAGGATATGTGTTTGCTGGTCAGGAGAGACTCAAAATAACACTGCCACAAAT--------------------------------------AGTGTCACAAAATTcctggacttctagctgatcctgt-gaaatagtcagataagtgagtaaagccatcttggaccctctagaccaggcaagctgcc-ctcaatgattccagttgaggctacacggaactgaa--ttgcttagtcaag-------------cctgatccatgaaattgagaggtataataaagtgataattgttttaagtcactgaatttgggggtggttcct-------------ataaacagaacacatctcctaactaatacaGAGAC-AAAAACTTACCTTAAAAGTTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39824923 355 + 64411610 GATGTTAGGTATCTTTGCCTTTTGCATCATTTAGGATATGTGTTTGCTGGTCAGGAGAGACTCAAAATAACACTGCCACAAAT--------------------------------------AGTGTCACAAAATTcctggacttctagctgatcctgt-gaaatagtcagataagtgagtaaagccatcttggaccctctagaccaggcaagctgcc-ctcaatgattccagttgaggctacacggaactgaa--ttgcttagtcaag-------------cctgatccatgaaattgagaggtataataaagtgataattgttttaagtcactgaatttgggggtggttcct-------------ataaacagaacacatctcctaactaatacaGAGAC-AAAAACTTACCTTAAAAGTTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6242466 353 - 8369475 GATGTTAGGTATCTTT-TCTTTTGCATCATTTAGGATATGTGTTTGCTGGTCAGGAGAGACTCAAAATAACACTGCCACAAAT--------------------------------------AGTGTCACAAAATTACTGGActtctagctgatcctgt-gaaatagtcagataagtgagtaaagccatcttggaccctctagaccaggcaagctgcc-ctcaatgattccagttgaggctacatggaactgaa--ttgcttagtcaag-------------cctgatccatgaaattgagaggtataataaagtgataattgttttaagtcactgaattt-ggggtggttcct-------------ataaacagaacacatctcctaactaatacaGAGAC-AAAAACTTACCTTAAAAGTTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63837490 392 - 106955855 TATGTTAGGTATCTTTGCCTTTTGCATCATTTAGGATATGTGTTTGCTGGTCAGGAGAGACTCAAAATAACACTGCCACAAATAGGACAGCTGACAGTCCA-AACGGTAAGGTGGCTTCACAGTGTCACAAAAGTcctggacttctagctgatcctgt-gaaatggtcagataagtgagtgaagccatcttggaccctctagaccaggcaagctgcc-ctcaatgattccagttgaggctatatggaactgaa--tggcttagtcaag-------------cctgatccatgaaattgagaggtataataaagtgataattgttttaagtcactgaatttgggggtggttcct-------------ataaacagaacacagctcctaactaatacaAAGAC-AAAAACTTACCTTAGAAGTTTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30145694 392 + 53671032 GATGTTAGGAATCTTTGCCTTTTGCGTCACTTAAGGTATGTGTTTGCTGCTCAGGAGAGCCTCAAAATAACACTGCCACAAATAGGACAGCTGACAGTCCA-AATGGTAAGGTGGCTTCACAGTgtcccaaaagtcctggacttctagctgatcctgt-gaaatagtcagataagtgagtgaagccatcttggaccctctagaccaggcaagctgcc-cccagtgattccagttgaggctacatggaactgaa--ttgcttagtcaag-------------catgatccatgaaattgagaggtataataaagtgataattgttttaagtcactgaatttgtgggtggttcct-------------gtaaacagaacacatctcctaactaatacaGAGAG-AAAACCTTACTTTAAAATTGTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34598557 392 + 59248254 GATGTTAGGAATCTTTGCCTTTTGCGTCACTTAAGGTATGTGTTTGCTGCTCAGGAGAGCCTCAAAATAACACTGCCACAAATAGGACAGCTGACAGTCCA-AATGGTAAGGTGGCTTCACAGTgtcccaaaagtcctggacttctagctgatcctgt-gaaatagtcagataagtgagtgaagccatcttggaccctctagaccaggcaagctgcc-cccagtgattccagttgaggctacatggaactgaa--ttgcttagtcaag-------------catgatccatgaaattgagaggtataataaagtgataattgttttaagtcactgaatttgtgggtggttcct-------------gtaaacagaacacatctcctaactaatacaGAGAG-AAAACCTTACTTTAAAATTGTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4466952 392 - 13342542 GATGTTAGGAATCTTTGCCTTTTGCGTCACTTAAGGTATGTGTTTGCTGCTCAGGAGAGCCTCAAAATAACACAGCCACAAATAGGACAGCTGACAGTCCA-AATGGTAAGGTGGCTTCACAGTgtcccaaaagtcctggacttctagctgatcctgt-gaaatagtcagataagtgagtgaagccatcttggaccctctagaccaggcaagctgcc-cccagtgattccagttgaggctacatggaactgaa--ttgcttagtcaag-------------catgatccatgaaattgagaggtataataaagtgataattgttttaagtcactgaatttgtgggtggttcct-------------gtaaacagaacacatctcctaactaatacaGAGAG-AAAACCTTACTTTAAAATTGTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5397453 392 + 7714307 GATGTTAGGAATCTTTGCCTTTTGCGTCACTTAGGGTATGTGTTTGCTGGTCAGGAGAGACTCAAAATAACACTGCCACAAATAGGACAGCTGACAGTCCA-AATGGTAAGGTGGCTTCACAGTgtcccaaaagtcctggacttctagctgatcctgt-gaaatagtcagataagtgagagaagccatcttggaccctctagaccaggcaagctgcc-cccagtgattccagttgaggctacatggaactgaa--ttgcttagtcaag-------------catgatccatgaaattgagaggtataataaagtgataattgttttaagtcactgaatttgtgggtggttcct-------------gtaaacagaacacatctcctaactaatacaGAGAG-AAAATCTTACCTTAAAATTGTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29205294 392 + 50890351 GATGTTAGGAATCTTTGCCTTTTGCGTCACTTAGGGTATGTGTTTGCTGGTCAGGAGAGACTCAAAATAACACTGCCACAAATAGGACAGCTGACAGCCCA-AATGGTAAGGTGGCTTCACAGTgtcccaaaagtcctagacttctagctgaccctgt-gaaatagtcagataagtgagtggagccatcttggaccctctagaccaggcgagctgcc-cccagtgattccagttgaggctacatggaactgaa--ttgctcagtcaag-------------catgatccatgaaattgagaggtataataaagtgataattgttttaagtcaccgaatgtgtgggtggttCCT-------------GTAAACAGAACACATCTCCTAACTAATACAGAGAG-AAAACCTTACCTTAAAATTGTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 818679 392 - 2385121 GACGTTAGGAATCTTTGCCTTTTGCATCACTTAGGGTATGTGTTTGCTGGTCAGGAGAGACTCAAAATAACACTGCCACAAATAGGACAGCTGACAGTCCA-AATGGTAAGGTGGCTTCACAGTgtcccaaaagtcctggacttctagctgatcctgt-gaaatagtcagataagtgagtgaagccatcttggaccctctagaccaggcaagctgcc-cccagtgattccagttgaggctacatggaactgaa--ttgcttagtcaag-------------catgatccatgaaattgagaggtataataaagtgataattgttttaagtcactgaatttgtgggtggttCCT-------------GTAAACAGAACACATCTCCTAACTAACACAGAGAG-AAAACCTTACCTTAAAATTGTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2263928 392 + 4274983 GATGTTAGGAATCTTTGCCTTTTGCGTCACTTAGGGTATGTGTTTGCTGGTCAGAAGAGACTCAAAATAACACTGCCACAAATAGGACAGCTGACAGTCCA-AATGGTAAGGTGGCTTCACAGTgtcccaaaagtcctggacttctagctgatcctgt-gaaatagtcagataagtgagtgaagccatcttggaccctctagaccaggcaagctgcc-cccagtgattccagctgaggctacatggaactgaa--ttgcttagtcaag-------------catgattcatgaaattgagaggtataataaagtgagaattgttttaagtcactgaatttgtgggtggttcct-------------gtaaacagaacacgtctcctaactaatacaGAGAG-AAAACTTTACCTTAAAATTTTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28495571 385 + 49145316 GATATTAGGTATCTTTGCCTTTTGCATCATTTAGGATACGTGTTTGCTGGTCAGGAGAGACTCAAAATAATACTGCCACAAATAGGATAGCTGATAGTCCA-AAAGGTTAGGTGGCTTCACAGTGTCACAAAA-TCCTGGCCTTCTAGCTGATCCTGT--AAATAGTCAGATA-------------ATCTTGGACCCACTAGAC----CAAACTGCC-CCCAATGATTAcagctgaagctacatagaactgaa--ttgcttagccaag-------------cctgatccatgaaattgagaggtataataagatgataatcgttttaagtcactgaatttgggggtggttccttacacataaaaggataaacagagcaCACCACCTAA-TAATACAGAGAG-AAAAACTTTCCTTAAAATTTTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5338648 386 + 8899380 GATGTTAGGTATCTTTGCCTTTTGCATCATTTAGGATACATGTTTGCTGGTCAGGAGAGACTCAAAATAACACTGCCACAAATAGAACAGCTGATAGTCCA-AAAGGTAAGGTGGCTTCACATTGTCACAAAATTTCTGGCCTTCTAGCTGATCCTGTAAAAATAGTCAGATA-------------ATCTTGGGCCCTCTAGACCAGACAAACTGTC-CCCAATGATTCCAGTTGAGGCTACATAGAACTGAA--TTGCTTAGCCAAG-------------cctgatccatgaaattgagaggt---ttaagatgataattgttgtaagtcactgaatttgggggtggttgcttacacataaaaggataaacagagcaCACCTCC----TAATACAGAAAG-AAAAACTTACCTTAAAATTTTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1553358 387 - 2680843 GATGTTAGGTATCTCTGCATTTTGCATCATTTAGGATACATGTTTGCTGGTCAGGAGAGACTCAAAATAACACTGCCACAAATAGAATAGCTGACAGTCCA-AAACGTAAGGTGGCTTCACAGTGTCACAAAATTCCCGGCCTTCTAGCTGATCCTGT--AAAT----AGATA-------------ATCCTGGACCCTCTAGACCAGACAAACTGCC-CCCAATGATTCCAGTTGAGGCTACATAGAACTGAA--TTGCTTAGCCAAG-------------CCTGATCCATGAAATTGAGAGGTATAATAAGATGGTAATTGTTGTAAGTCACTGAATTTGGGGGTGGTTCCTTACACATAAAAGGATAAACAGAGCACACCTCCTAACTAATACAGAGAG-AAAAACTTACCTTAAAATTTTA i cebCap1.NW_016107633v1 I 151 C 0 s aotNan1.NW_018505377v1 301312 391 - 4471408 GATGTTAGGTGGCTTTGCCTTTTGCATCGTTTAGGATATGTGTTTGCTGGTCAGGAGAGACTCAAAACAACACTGCCACAAATAGGATAGCTGATAGTCCA-AAAGGTAAGGTGGCTTCACAGTGTCACAAAATTCCTGGCCTTCTAGCTGATCCTGT--AAATAGTCAGATA-------------Atcttggaccctctagaccagacgaactgcc-cccaatgattccagttgaggctatatagaactgaa--ttgcttagccaag-------------cctgatccatgaaattgagaagtataataagatgataattgttttaagtcattgaatttgggggtggttccttacacataaaaggataaacagaacaCACCTCCTAACTAATACAGAGAG-AAAAACTTACCTTAAAATTTTA i aotNan1.NW_018505377v1 I 345 C 0 s dasNov3.JH563638 254197 413 + 643850 GATATTAGTTGCCTTTTCCTTTTGCTTCATTTAGGATATGCATTTGGCTTCTAGTTAAGAATCAAAATAACACTGGCATAAATAAGATAGTTAACAATCCATGATGATAGGGTGGCTTCATAGTGTCACAAATATcccagcttttcagctgatcttac-catgaagtaagacatgtaggggaagccatcttggaccaac-agaccaacctagctgccaccaaataaccccagttgatgctacatggagcaagagcttgctcagtcaaggcttgcttgatttcctgattcacaaaattgtgag-----ataaaataataa---ttttgagtcaccgaatttggggtagattgtt-acacataaatagataaccagaGTACATTCTCTAACTAATACATGGAGAAAAAAAATACCATAAAATCCTA i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I a score=4449.000000 s hg38.chr19_GL383574v1_alt 14274 3 + 155864 TAT s panTro5.chr19 36073114 3 + 61309027 TAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39825278 3 + 64411610 TAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6242819 3 - 8369475 TAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63837882 3 - 106955855 TAT i nomLeu3.chr10 C 0 C 0 s cebCap1.NW_016107633v1 1553745 3 - 2680843 TAT i cebCap1.NW_016107633v1 C 0 C 0 s dasNov3.JH563638 254610 3 + 643850 TTT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e chlSab2.chr6 29205686 0 + 50890351 C e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 301703 0 - 4471408 C e saiBol1.JH378197 5339034 0 + 8899380 C e calJac3.chr22 28495956 0 + 49145316 C e colAng1.NW_012111697v1 2264320 0 + 4274983 C e manLeu1.NW_012102454v1 819071 0 - 2385121 C e cerAty1.NW_012005268v1 5397845 0 + 7714307 C e macNem1.NW_012011689v1 4467344 0 - 13342542 C e macFas5.chr19 34598949 0 + 59248254 C e rheMac8.chr19 30146086 0 + 53671032 C a score=1740.000000 s hg38.chr19_GL383574v1_alt 14277 2 + 155864 CT s panTro5.chr19 36073117 2 + 61309027 CT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39825281 2 + 64411610 CT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6242822 2 - 8369475 CT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63837885 2 - 106955855 GT i nomLeu3.chr10 C 0 C 0 s cebCap1.NW_016107633v1 1553748 2 - 2680843 CT i cebCap1.NW_016107633v1 C 0 C 0 e dasNov3.JH563638 254613 0 + 643850 C e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e chlSab2.chr6 29205686 0 + 50890351 C e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 301703 0 - 4471408 C e saiBol1.JH378197 5339034 0 + 8899380 C e calJac3.chr22 28495956 0 + 49145316 C e colAng1.NW_012111697v1 2264320 0 + 4274983 C e manLeu1.NW_012102454v1 819071 0 - 2385121 C e cerAty1.NW_012005268v1 5397845 0 + 7714307 C e macNem1.NW_012011689v1 4467344 0 - 13342542 C e macFas5.chr19 34598949 0 + 59248254 C e rheMac8.chr19 30146086 0 + 53671032 C a score=115383.000000 s hg38.chr19_GL383574v1_alt 14279 134 + 155864 Aggccgggcatggtggctcacgcctgtaatcccagcactttgggaggccgagacgggcggatcacgacgtcaggagattgagaccatcctcgttaacacggtgaaatcccttctctactaaaaatacaaaaaat s panTro5.chr19 36073119 134 + 61309027 Aggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgagacgggcggatcatgacgtcagaagattgagaccatcctcgttaacacggtgaaatcccgtctctactaaaaatacaaaaaat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39825283 134 + 64411610 Aggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgagacgggcggatcatgacgtcaggagattgagaccatcctcgttaacacggtgaaatcccgtctctactaaaaatacaaaaaat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6242824 134 - 8369475 Aggccgggcacggtggctcacgcctgtaatccgagcactttgggaggccgagacaggcggatcacgacgtcaggagactgagaccatcctcgttaccacagtgaaagcccgtctctactaaaaatacaaaaaat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63837887 134 - 106955855 Aggccgggcgcggtggctcgtgcctgtaatcccagcactttgggagggcgagacgggcggatcacaaggtcaggagatcgagaccatcctggttaacacagtgaaaccccatctctactaaaaatacaaaaaat i nomLeu3.chr10 C 0 M 100 e dasNov3.JH563638 254613 0 + 643850 C e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e chlSab2.chr6 29205686 0 + 50890351 C e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 301703 0 - 4471408 C e cebCap1.NW_016107633v1 1553750 0 - 2680843 C e saiBol1.JH378197 5339034 0 + 8899380 C e calJac3.chr22 28495956 0 + 49145316 C e colAng1.NW_012111697v1 2264320 0 + 4274983 C e manLeu1.NW_012102454v1 819071 0 - 2385121 C e cerAty1.NW_012005268v1 5397845 0 + 7714307 C e macNem1.NW_012011689v1 4467344 0 - 13342542 C e macFas5.chr19 34598949 0 + 59248254 C e rheMac8.chr19 30146086 0 + 53671032 C a score=63420.000000 s hg38.chr19_GL383574v1_alt 14413 110 + 155864 tagctgggcatggtggcgagcacctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccaggaggtggagcttgcagtgagccgagatcgcgccac s panTro5.chr19 36073253 110 + 61309027 tagctgggcatggtggcgagcacctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccaggaggtggagcttgcagtgagccgagatcgcgccac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39825417 110 + 64411610 tagctgggcatggtggcgagcacctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccaggaggtggagcttgcagtgagccgagatcgcgccac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6242958 110 - 8369475 tagctgggcatggtggcgagcacctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcagtgagccgagatcgcgccac i gorGor5.CYUI01015150v1 C 0 C 0 e dasNov3.JH563638 254613 0 + 643850 C e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e chlSab2.chr6 29205686 0 + 50890351 C e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 301703 0 - 4471408 C e cebCap1.NW_016107633v1 1553750 0 - 2680843 C e saiBol1.JH378197 5339034 0 + 8899380 C e calJac3.chr22 28495956 0 + 49145316 C e colAng1.NW_012111697v1 2264320 0 + 4274983 C e manLeu1.NW_012102454v1 819071 0 - 2385121 C e cerAty1.NW_012005268v1 5397845 0 + 7714307 C e macNem1.NW_012011689v1 4467344 0 - 13342542 C e macFas5.chr19 34598949 0 + 59248254 C e rheMac8.chr19 30146086 0 + 53671032 C e nomLeu3.chr10 63838021 100 - 106955855 M a score=64156.000000 s hg38.chr19_GL383574v1_alt 14523 70 + 155864 tgcactccatccagcctgggcgacacagcgagactccatctcaaaaaacaaacaaacaaacaaaaaaTTT- s panTro5.chr19 36073363 70 + 61309027 tgcactccatccagcctgggcgacacagcgagactccatctcaaaaaacaaacaaacaaacaaaaaaTTT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39825527 70 + 64411610 tgcactccatccagcctgggcgacacagcgagactccatctcaaaaaacaaacaaacaaacaaaaaaTTT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6243068 70 - 8369475 tgcactccatccagcctgggcgacacagcgagactccatctcaaaaaacaaacaaacaaacaaaaaaTTT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63838122 71 - 106955855 tgcactccatccagcctgggtgacacagcgagactccatctcaaaaaacaaacaaacaaacaaaaaaTTTA i nomLeu3.chr10 M 100 C 0 e dasNov3.JH563638 254613 0 + 643850 C e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e chlSab2.chr6 29205686 0 + 50890351 C e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 301703 0 - 4471408 C e cebCap1.NW_016107633v1 1553750 0 - 2680843 C e saiBol1.JH378197 5339034 0 + 8899380 C e calJac3.chr22 28495956 0 + 49145316 C e colAng1.NW_012111697v1 2264320 0 + 4274983 C e manLeu1.NW_012102454v1 819071 0 - 2385121 C e cerAty1.NW_012005268v1 5397845 0 + 7714307 C e macNem1.NW_012011689v1 4467344 0 - 13342542 C e macFas5.chr19 34598949 0 + 59248254 C e rheMac8.chr19 30146086 0 + 53671032 C a score=28665.000000 s hg38.chr19_GL383574v1_alt 14593 3 + 155864 TAT s panTro5.chr19 36073433 3 + 61309027 TAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39825597 3 + 64411610 TAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6243138 3 - 8369475 TAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63838193 3 - 106955855 TAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30146086 3 + 53671032 TAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34598949 3 + 59248254 TAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4467344 3 - 13342542 TAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5397845 3 + 7714307 TAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29205686 3 + 50890351 TAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 819071 3 - 2385121 TAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2264320 3 + 4274983 TAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28495956 3 + 49145316 TAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5339034 3 + 8899380 TAT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 301703 3 - 4471408 TAT i aotNan1.NW_018505377v1 C 0 C 0 e dasNov3.JH563638 254613 0 + 643850 C e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e cebCap1.NW_016107633v1 1553750 0 - 2680843 C a score=22920.000000 s hg38.chr19_GL383574v1_alt 14596 2 + 155864 CT s panTro5.chr19 36073436 2 + 61309027 CT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39825600 2 + 64411610 CT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6243141 2 - 8369475 CT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63838196 2 - 106955855 CT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30146089 2 + 53671032 CT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34598952 2 + 59248254 CT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4467347 2 - 13342542 CT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5397848 2 + 7714307 CT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29205689 2 + 50890351 CT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 819074 2 - 2385121 CT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2264323 2 + 4274983 CT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28495959 2 + 49145316 CT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5339037 2 + 8899380 CT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 301706 2 - 4471408 CT i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 254613 2 + 643850 CT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e cebCap1.NW_016107633v1 1553750 0 - 2680843 C a score=1019297.000000 s hg38.chr19_GL383574v1_alt 14598 107 + 155864 AATACCATGGTACCATAGCATTTGGAAATTACTGCTTTCCTCCTTTATTTTCATATGT----TGTTTG----TT--TTTTTTCCTTTTAAGAA--AGTCTTTATACTCACACAATTCTG s panTro5.chr19 36073438 106 + 61309027 AATACCATGGTACCATAGCATTTGGAAATTACTGCTTTCCTCCTTTATTTTCATATGT----TGTTTG----TT--TTTTT-CCTTTTAAGAA--AGTCTTTATACTCACACAATTCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39825602 105 + 64411610 AATACCATGGTAGCATAGCATTTGGAAATTACTGCTTTCCTCCTTTATTTTCATATGT----TG-TTG----TT--TTTTT-CCTTTTAAGAA--AGTCTTTATACTCACACAATTCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6243143 108 - 8369475 AATACCATGGTACCATAGCATTTGGAAATTACTGCTTTCCTCCTTTATTTTCATATGT----TGTTTG----TTTGTTTTT-CCTTTTAAGAA--AGTCTTTATACTCACACAATTCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63838198 104 - 106955855 AATACCATGGTACCATAGCATTTGGAAATTACTACTTTCCTGCTTTATTTTCATATGT----TGTT------TT--TTTTT-CCTTTTAAGAA--AGTCTTTATACTCACATAATTCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30146091 107 + 53671032 AATACCATGGTACCACAGCATTTGGAAATTACTACTTTCCTGCTTTATTTTTATATGT----TGTTCG----TT--TTTTTTCCTTTTAAGAA--AGTCTTTATACTCACACAATTCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34598954 107 + 59248254 AATACCATGGTACCACAGCATTTGGAAATTACTACTTTCCTGCTTTATTTTTATATGT----TGTTCG----TT--TTTTTTCCTTTTAAGAA--AGTCTTTATACTCACACAATTCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4467349 107 - 13342542 AATACCATGGTACCACAGCATTTGGAAATTACTACTTTCCTGCTTTATTTTTATATGT----TGTTCA----TT--TTTTTTCCTTTTAAGAA--AGTCTTTATACTCACACAATTCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5397850 109 + 7714307 AATACCATGGTACCACAGCATTTGGAAATTACTACTTTCCTGCTTTATTTTTATATGT----TGTTCG--TTTT--TTTTTTCCTTTTAAGAA--AGTCTTTATACTCACACAATTCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29205691 111 + 50890351 AATACCATGGTACCACAGCATTTGGAAATTACTACTTTCCTGCTTTATTTTTATATGT----TGTTCGTTTTTT--TTTTTTCCTTTCAAGAA--AGTCTTTATACTCACACAATTCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 819076 108 - 2385121 AATACCATGGTACCACAGCATTTGGAAATTACTACTTTCCTGCTTTATTTTTATATGT----TGTTCG---TTT--TTTTTTCCTTTTAAGAA--AGTCTTTATACTCACACAATTCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2264325 107 + 4274983 AATACCATGGTACCACAGCATTTGGAAATTACTACTTTCCTGCTTTATTTTTATAGGC----TGTTTG----TT--TTTTTTCCTTTTAAGAA--AGTCTTTATACTCACACAATTCTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28495961 102 + 49145316 AATACCATGGTACTAAAGCATTTCAAAATTACTACTTTCCTGCTTTATTTTCATATGC----TATTTG----TT--TCTTT-CCTTTTAATTA------TTTATATTCACACAACTCTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5339039 106 + 8899380 AATACCATGGCACTAAAACATTTCAAAATTACTACTTTCCTGCTTTATTTTCATATGC----GGTTTG----TT--TCTTT-CCTTTTAATTA--AGACTTTATATTTACACAACTCTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1553750 110 - 2680843 AATACCATGGTACTAAAGCATTTCAAAATTACTATTTTCCTGCTTTATTTTCATATGCTGTTTGTTTG----TT--TCCTT-CCTTTTAATTA--AGACTTTATATTCACACAACTCTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 301708 106 - 4471408 AATACCATGGTACTAAAGCATTTCAAAATTACTACTTTCCTGCTTTATTTTCATATGC----TATTTG----TT--TCTTT-TCTTTTAATTA--AATCTTTATATTCGCACAAATCTA i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 254615 108 + 643850 AATACTTTGATACAATAGCATTTGGGGACTATTACTTTCCTGCTTTATTTTCATAGGT----TTGTCA----AT--TTTTC-TCCTTTAATAAATAGTCTTTATACTCTTACAATATTG i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5402164 10416 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I a score=172896.000000 s hg38.chr19_GL383574v1_alt 14705 14 + 155864 TATTCAGCTTTTTT s panTro5.chr19 36073544 14 + 61309027 TATTCAGCTTTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39825707 14 + 64411610 TATTCAGCTTTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6243251 14 - 8369475 TATTCAGCTTTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63838302 14 - 106955855 TATTCAGCTTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30146198 14 + 53671032 TATTCAGTTTTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34599061 14 + 59248254 TATTCAGTTTTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4467456 14 - 13342542 TATTCAGTTTTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5397959 14 + 7714307 TATTCAGTTTTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29205802 14 + 50890351 TATTCAGTTTTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 819184 14 - 2385121 TATTCAGTTTTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2264432 14 + 4274983 TATTCAGTTTTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28496063 14 + 49145316 TATTTAGCTTTTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5339145 14 + 8899380 TATTTAGCTTTTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1553860 14 - 2680843 TATTTAGCtttttt i cebCap1.NW_016107633v1 C 0 I 882 s aotNan1.NW_018505377v1 301814 14 - 4471408 TATTTAGCTTTTTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5412580 14 + 5549422 TATTTAGCTTTTTT i otoGar3.GL873654 I 10416 C 0 s dasNov3.JH563638 254723 14 + 643850 TATTCAGCTTTTAA i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I a score=1131544.000000 s hg38.chr19_GL383574v1_alt 14719 116 + 155864 ACTTACATATTATTTCAAAAGCAAGTGCCTGTTTTTGCTACATAAACTTAGT------------TTTTAATAGGGCCATTTTACATGGAAAGTTT--gccttt------ttgagatagaattcacatatcataaaa s panTro5.chr19 36073558 116 + 61309027 ACTTAGATATTATTTCAAAAGCAAGTGCCTGTTTTTGCTACATAAACTTAGT------------TTTTAATAGGGCCATTTTACATGGAAAGTTT--gccttt------ttgagatagaattcacatatcataaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39825721 116 + 64411610 ACTTAGATATTATTTCAAAAGCAAGTGCCTGTTTTTGCTACATAAACTTAGT------------TTTTAATAGGGCCATTTTACATGGAAAGTTT--gccttt------ttgagatagaattcacatatcataaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6243265 116 - 8369475 ACTTAAATATTATTTCAAAAGCAAGTGCCTGTTTTTGCTACGTAAACTTAGT------------TTTTAATAGGGCCATTTTGCATGGTAAGTTT--gccttt------ttgagatagaattcacatatcataaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63838316 115 - 106955855 ACTTAAATATTATTTCAAAAGCAAGTGCCTGTTTTTGCTATATAACCTTAG-------------TTTTAATAGGGCCATTTTACATGGAAAGTTT--gccttt------ttgagatagaattcacatatcataaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30146212 115 + 53671032 ACTTAAATATTATTTCAAAAGCAAGTGCTTGTTTTTGCTACATAACCTCAG-------------TTTTAATAGGGCCATTTTACATGGAAAGTTT--gccttt------ttgagatagaattcacgtatcataaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34599075 115 + 59248254 ACTTAAATATTATTTCAAAAGCAAGTGCTTGTTTTTGCTACATAACCTCAG-------------TTTTAATAGGGCCATTTTACATGGAAAGTTT--gccttt------ttgagatagaattcacgtatcataaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4467470 115 - 13342542 ACTTAAATATTATTTCAAAAGCAAGTGCTTGTTTTTGCTACATAACCTCAG-------------TTTTAATAGGGCCATTTTACATGGAAAGTTT--gccttt------ttgagatagaattcacgtatcataaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5397973 115 + 7714307 ACTTAAATATTATTTCAAAAGCAAGTGTTTGTTTTTGCTACATAACCTCAG-------------TTTTAATAGGGCCATTTTACATGGAAAGTTT--gccttt------ttgagatagaattcacgtatcataaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29205816 115 + 50890351 ACTTAAATATTATTTCAAAAGCAAGTGCTTATTTTTGCTACATAACCTCAG-------------TTTTAATAGGGCCATTTTACATGGAAAGTTT--GTcttt------ttgagatagaattcacgtatcataaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 819198 115 - 2385121 ACTTAAATATTATTTCAAAAGCAAGTGCTTGTTTTTGCTACATAACCTCAG-------------TTTTAATAGGGCCATTTTACATGGAAAGTTT--GCCTTT------TTGAGTTAGAATTCACGTATCATAAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2264446 115 + 4274983 ACTTAAATATTATTTCAAAAGCAAGTGCCTGTTTTTGCTACATAACCTCAG-------------TTTTAATAGGGCCACTTTACATGGCAAGTTT--gccttt------ttgagatagaattcacgtatcataaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28496077 115 + 49145316 ACTTAAATATTATTTCAAAAGCAAGTGGTTGTTTTTGCTACACAACCTTAG-------------TTTTAATAGGGCCATTTTATATAGAAAGTTT--gccttt------ttgaaatagaattcacatatcacaaaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5339159 114 + 8899380 ACTTAAATATTATTTCAAAAGCAAGTGGCTG-TTTTGCTACATAATCTTAG-------------TTTTAATAGGGCCATTTTATACAGAAAGTTT--gccttt------ttgaaatagaattcacatatcatgaaa i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 301828 115 - 4471408 ACTTAAATATTATTTCAAAAGCAAGTGGCTGTTTTTGCTACATAACCTTAG-------------TTTTAATAGGGCCATTTCATATGGAAAGTTT--gccttt------ttgaaatagaattcacatatcataaaa i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5412594 115 + 5549422 ATTTAAGTGTTACTTCACAAGCAAGCGCCCA-TGTTACTACATATCTTTCA-------------TTTTAATAAGGCTGTAATACATGTAGACTTC-Aaacttt------tggaaatataattcaaatatgataaaa i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 254737 133 + 643850 ATTTAAATACTATTTCATAAATATGTGTATA---TTGATAAATAGCCTTAGTTTTGATGTTTAGTTTTAATCATTTTATAATACAAGAAGACTTTAAATCTTTTTAAAattgagatataattcacataccataaaa i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I a score=69367.000000 s hg38.chr19_GL383574v1_alt 14835 11 + 155864 ttcactctttt s panTro5.chr19 36073674 8 + 61309027 ttcact---tt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39825837 11 + 64411610 ttcacttttct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6243381 11 - 8369475 ttcactctttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63838431 11 - 106955855 ttcactctttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30146327 11 + 53671032 ttcactttctt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34599190 11 + 59248254 ttcactttctt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4467585 11 - 13342542 ttcactttctt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5398088 11 + 7714307 ttcactttctt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29205931 11 + 50890351 ttcactttctt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 819313 11 - 2385121 TTCACtttctt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2264561 11 + 4274983 ttcactttctt i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5412709 11 + 5549422 ttcactttttt i otoGar3.GL873654 C 0 I 141 s dasNov3.JH563638 254870 11 + 643850 tttaccTtttt i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 301943 0 - 4471408 C e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e saiBol1.JH378197 5339273 0 + 8899380 C e calJac3.chr22 28496192 0 + 49145316 C a score=79608.000000 s hg38.chr19_GL383574v1_alt 14846 19 + 155864 ------------ttttttt--tttttttttttt s panTro5.chr19 36073682 19 + 61309027 ------------ttttttt--tttttttttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39825848 19 + 64411610 ------------ttttttt--tttttttttttt i panPan2.chr19 C 0 M 235 s gorGor5.CYUI01015150v1 6243392 19 - 8369475 ------------ttttttt--tttttttttttt i gorGor5.CYUI01015150v1 C 0 I 1 s nomLeu3.chr10 63838442 19 - 106955855 ------------ttttttt--tttttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30146338 21 + 53671032 ------------ttctttctttttttttttttt i rheMac8.chr19 C 0 I 1 s macFas5.chr19 34599201 21 + 59248254 ------------ttctttctttttttttttttt i macFas5.chr19 C 0 I 1 s macNem1.NW_012011689v1 4467596 19 - 13342542 ------------ttctttc--tttttttttttt i macNem1.NW_012011689v1 C 0 I 1 s cerAty1.NW_012005268v1 5398099 19 + 7714307 ------------ttctttt--cttttttttttt i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29205942 16 + 50890351 ------------ttctttt--ttttttttt--- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 819324 19 - 2385121 ------------ttctttt--tttttttttttt i manLeu1.NW_012102454v1 C 0 I 1 s colAng1.NW_012111697v1 2264572 17 + 4274983 ------------ttctttt--tttttttttt-- i colAng1.NW_012111697v1 C 0 C 0 s dasNov3.JH563638 254881 28 + 643850 ttaaagatctatttattta--ctttatttt--- i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5412720 141 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 301943 0 - 4471408 C e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e saiBol1.JH378197 5339273 0 + 8899380 C e calJac3.chr22 28496192 0 + 49145316 C a score=1748.000000 s hg38.chr19_GL383574v1_alt 14865 1 + 155864 t s panTro5.chr19 36073701 1 + 61309027 t i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6243412 1 - 8369475 t i gorGor5.CYUI01015150v1 I 1 C 0 s rheMac8.chr19 30146360 1 + 53671032 t i rheMac8.chr19 I 1 C 0 s macFas5.chr19 34599223 1 + 59248254 t i macFas5.chr19 I 1 C 0 s macNem1.NW_012011689v1 4467616 1 - 13342542 t i macNem1.NW_012011689v1 I 1 C 0 s cerAty1.NW_012005268v1 5398119 1 + 7714307 t i cerAty1.NW_012005268v1 I 1 C 0 s manLeu1.NW_012102454v1 819344 1 - 2385121 N i manLeu1.NW_012102454v1 I 1 C 0 s dasNov3.JH563638 254909 1 + 643850 t i dasNov3.JH563638 C 0 I 11419 e otoGar3.GL873654 5412720 141 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e chlSab2.chr6 29205958 0 + 50890351 C e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 301943 0 - 4471408 C e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e saiBol1.JH378197 5339273 0 + 8899380 C e calJac3.chr22 28496192 0 + 49145316 C e colAng1.NW_012111697v1 2264589 0 + 4274983 C e nomLeu3.chr10 63838461 0 - 106955855 C e panPan2.chr19 39825867 235 + 64411610 M a score=263289.000000 s hg38.chr19_GL383574v1_alt 14866 59 + 155864 -------------------------------------------------tgcgatggagtcttgctctgtcgcccagactggagtgcagtggcgtgatctcggctcac s panTro5.chr19 36073702 59 + 61309027 -------------------------------------------------tgcggtggagtcttgctctgtcgcccagactggagtgcagtggcgcgatctcagctcac i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6243413 59 - 8369475 -------------------------------------------------tgcgatggagtcttgctctgtcgcccagactggagtgcagtggcgtgatctcggctcac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63838461 59 - 106955855 -------------------------------------------------tgcgatggagtcttgctccgtcgcccaggctggagtgcagtggtgcgatctcggctctc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30146361 59 + 53671032 -------------------------------------------------tgtgatggaatcttgctctgtcatccaggctggagtgcagtggcacaatctcggctcac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34599224 59 + 59248254 -------------------------------------------------tgtgatggaatcttgctctgtcatccaggctggagtgcagtggcgcaatctcggctcac i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4467617 59 - 13342542 -------------------------------------------------tgtgatggaatcttgctctgtcatccaggctggagtgcagtggcgcaatctcggctcac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5398120 59 + 7714307 -------------------------------------------------tgtgatggaatcttgctctgtcatccaggctggagtgcagtggcgcaatctcggctcac i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29205958 59 + 50890351 -------------------------------------------------tgtgatggaatcttgctctgtcatccaggctgaagtgcagtggtgcaatctcggctcac i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 819345 108 - 2385121 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTgatggaatcttgctctgtcatccaggctggagtgcagtggcgcaatctcggctcac i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2264589 59 + 4274983 -------------------------------------------------tgtgatggagtcttgctctgtcacccaggctggagtgcagtggcgcaatctcggctcac i colAng1.NW_012111697v1 C 0 I 267 e dasNov3.JH563638 254910 11419 + 643850 I e otoGar3.GL873654 5412720 141 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 301943 0 - 4471408 C e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e saiBol1.JH378197 5339273 0 + 8899380 C e calJac3.chr22 28496192 0 + 49145316 C e panPan2.chr19 39825867 235 + 64411610 M a score=287520.000000 s hg38.chr19_GL383574v1_alt 14925 61 + 155864 tgcaacctctgcctcccaagttcaagcaattctcctgcctcagcctcctgaggagctggga s panTro5.chr19 36073761 61 + 61309027 tgcaacctctgcctcccaagttcaagcaattctcctgcctcagcctcctgaggagctggga i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6243472 61 - 8369475 tgcaacctctgcctcccaagttcaagcaattctcctgcctcagcctcctgagtagctggga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63838520 61 - 106955855 tgcaacctctgcctcccaagttcaagcaattctcctgcctcagcctcccgagtagctggga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30146420 61 + 53671032 tgcaacctccgcctcccgagtccaagcaattctcctgcctcagcctcctgagtagctggga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34599283 61 + 59248254 tgcaacctccgcctcccgagtccaagcaattctcctgcctcagcctcctgagtagctggga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4467676 61 - 13342542 tgcaacctccgcctcccgagtccagccaatttctcctgctcagcctcctgagtagctggga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5398179 61 + 7714307 tgcaacctccgcctcccgagtccaagcaattctcctgcctcagtctcctgagtagctggga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29206017 61 + 50890351 tgcaacctccgcctccctagttcaagcaattctcctgcctcagcctcctgagtagctggga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 819453 61 - 2385121 tgcaacctccgcctcccaagttcaagcaattctcctgcctcagcctcctgagtaactggga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2264915 61 + 4274983 tgcagcctccgcctcctgagttcaagcaattctcctgcctcagcctcctgagtagctggga i colAng1.NW_012111697v1 I 267 C 0 e dasNov3.JH563638 254910 11419 + 643850 I e otoGar3.GL873654 5412720 141 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 301943 0 - 4471408 C e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e saiBol1.JH378197 5339273 0 + 8899380 C e calJac3.chr22 28496192 0 + 49145316 C e panPan2.chr19 39825867 235 + 64411610 M a score=194462.000000 s hg38.chr19_GL383574v1_alt 14986 48 + 155864 ttacag--acgcccgccacca-cgcccagctaa-ttttttttgtattttta-g s panTro5.chr19 36073822 48 + 61309027 ttacag--acgcccgccacca-tgcccagctaa-ttttttttgtattttta-g i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6243533 48 - 8369475 ttacag--acgcccgccacca-cgcccagctaa-ttttttttgtattttta-g i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63838581 48 - 106955855 ttacag--actcccgccacca-tgcccaggtag-ttttttttgtattttta-g i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30146481 48 + 53671032 ttacag--gcatgcaccacca-tgcctagctaa-ttttttttgtattttta-g i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34599344 48 + 59248254 ttacag--gcatgcaccacca-tgcctagctaa-ttttttttgtattttta-g i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4467737 45 - 13342542 ttacagcagca-----cacca-tgcctag-taa-ttttttttgtatttttagg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5398240 48 + 7714307 ttacag--gcatgcatcacca-tgcccagctaa-ttttttttgtattttta-g i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29206078 48 + 50890351 ttacag--gcatgcactacca-tgcccagctaa-ttttttttgtattttta-g i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 819514 49 - 2385121 ttacag--gcatgcaccatca-tgcccagctaatttttttttgtattttta-g i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2264976 48 + 4274983 ttacag--gcatgcaccacca-tgcccggctaa-ttttttttgtattttta-g i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5412861 49 + 5549422 tcatag--tcccttgtagccattgacccactaa-tattttctgcctctata-g i otoGar3.GL873654 I 141 I 185 e dasNov3.JH563638 254910 11419 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 301943 0 - 4471408 C e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e saiBol1.JH378197 5339273 0 + 8899380 C e calJac3.chr22 28496192 0 + 49145316 C e panPan2.chr19 39825867 235 + 64411610 M a score=483235.000000 s hg38.chr19_GL383574v1_alt 15034 107 + 155864 tactacg-ttggtcacgttggtctcgaactcctgacctcgtgatctgcccacctcagcctcccaaagtgctgggatcacaggcttgagccaccgcgcccggccctaag s panTro5.chr19 36073870 107 + 61309027 tactacg-ttggtcacgttggtctcgaactcctgacctcgtgatctgcccacctcagcctcccaaagtgctgggatcacaggcttgagccaccgcgcccggccctaag i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6243581 107 - 8369475 tactatg-ttggtcacgttggtctcgaactcctgacctcgtgatctgcccacctcagcctcccaaagtgctgggattacaggcttgagccaccgcgccccggcccaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63838629 107 - 106955855 tactatg-ttggtcaggttggtctcgaactcctgacctcatgatctgcccacctcggcctcccaaagtgctgggattacaggcttaagccaccgcgcccagccctaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30146529 107 + 53671032 taccatg-ttggtcaggttggtctcaaactcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggctggagccaccccacctggcccaaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34599392 107 + 59248254 taccatg-ttggtcaggttggtctcaaactcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggctggagccaccccacctggcccaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4467782 105 - 13342542 taccatgtttggtcaggtt-gtctcaaactcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggctggagccaccccacctggccc--aa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5398288 107 + 7714307 taccatg-ttggtcaggttggtctcgaactcctgaccttgtgatccacccacctcagcctcccaaagtgctgggattacaggctggagccacctcgcctggcccaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29206126 107 + 50890351 taccatg-ttggtcaggttggtctcgaactcctgacttcgtgatccgcccacctcagcctcccaaaatgctgggattacaggctggagccaccccgcccggcccaaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 819563 107 - 2385121 taccatg-ttggtcaggttcgtctcgaactcctgacctcgtgatccacccacctcagcctcccaaagtgctgggattacaggctggagccactccgcccggccCaaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2265024 107 + 4274983 taccatg-ttggtcaggttggtctcgaactcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattataggctggagccaccccgcccggccCaaaa i colAng1.NW_012111697v1 C 0 C 0 e dasNov3.JH563638 254910 11419 + 643850 I e otoGar3.GL873654 5412910 185 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e aotNan1.NW_018505377v1 301943 0 - 4471408 C e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e saiBol1.JH378197 5339273 0 + 8899380 C e calJac3.chr22 28496192 0 + 49145316 C e panPan2.chr19 39825867 235 + 64411610 M a score=122304.000000 s hg38.chr19_GL383574v1_alt 15141 15 + 155864 ttcactttttaaagt s panTro5.chr19 36073977 15 + 61309027 ttcactttttaaagt i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6243688 15 - 8369475 atcactttttaaagt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63838736 15 - 106955855 ttcactttttaaagt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30146636 15 + 53671032 ttcactttttaaagt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34599499 15 + 59248254 ttcactttttaaagt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4467887 15 - 13342542 ttcactttttaaagt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5398395 15 + 7714307 ttcactttttaaagt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29206233 15 + 50890351 ttcactttttaaagt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 819670 15 - 2385121 ttcactttttaaagt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2265131 15 + 4274983 ttcactttttaaagt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28496192 15 + 49145316 tccactttttaaagt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5339273 15 + 8899380 ttcactttttaaagt i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 301943 15 - 4471408 ttcactttttaaagt i aotNan1.NW_018505377v1 C 0 C 0 e dasNov3.JH563638 254910 11419 + 643850 I e otoGar3.GL873654 5412910 185 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e panPan2.chr19 39825867 235 + 64411610 M a score=867209.000000 s hg38.chr19_GL383574v1_alt 15156 129 + 155864 atacaatttagtgggttttcg-tatatccacaaagccatgcaaccattatcatt--------atatacttccagacattttc----------ttttttcttt-cccttttt--gagatggagtttcactcttgttgtccagactggagtgt s panTro5.chr19 36073992 129 + 61309027 atacaatttagtgggttttcg-tatatccacaaagccatgcaaccattatcatt--------atatacttccagacattttc----------ttttttcttt-cccttttt--gagatggagtttcactcttgttgtccagactggagtgt i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6243703 129 - 8369475 atacaatttagtgggttttcg-tatatccacaaagccatgcaaccattatcatt--------atatacttccagacattttc----------ttttttcttt-tccttttt--gagatggagtttcactcttgttgtccagactggagtgt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63838751 129 - 106955855 atacaatttagtgggttttag-tatatccacaatgccatgcaaccattatcatt--------atatacttccagacattttc----------ttttttcttt-tccttttt--gacatggagtttcactcttgttgtccagagtggagtgt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30146651 126 + 53671032 atacaatttagtgggttttag-tatatctacaaagtcatgcaaccattatcatt--------atatactaccagacatt-------------ttttttcttt-ttcttttt--gagatggagtttcactcttgttgtccagactggagtgc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34599514 126 + 59248254 atacaatttagtgggttttag-tatatctacaaagtcatgcaaccattatcatt--------atatactaccagacatt-------------ttttttcttt-ttcttttt--gagatggagtttcactcttgttgtccagactggagtgc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4467902 125 - 13342542 atacaatttagtgggttttagatatatctacaaagtcatgcaa-cattatcatt--------atatactaccagaca-t-------------ttttttcttt-ttcttttt--gagatggagtttcactcttgttgtccagactggagtgc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5398410 126 + 7714307 atacaatttactgggttttag-tatatctacaaagtcatacaaccattatcatt--------atatactaccagacatt-------------ttttttcttt-ttcttttt--gagatggagtttcactcttgttgtccagactggagtgc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29206248 126 + 50890351 atacaatttagtgggttttag-tatatctacaaagtcatgcaaccattatcatt--------atatactaccagacctt-------------ttttttcttt-ttcttttt--gagacggagtttcgctcttgttgtccagactggagtgc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 819685 126 - 2385121 atacaatttagtgggttttag-tatatctacaaagtcatgcaaccattatcatt--------atatactaccagacatt-------------ttttttcttt-ttcttttt--gagacggagtttcactcttgttgtccagactggagtgc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2265146 126 + 4274983 atacaatttagtgggttttag-tatatctacaaagtcatgcaaccattatcatt--------atatactaccagacatt-------------ttttttcttt-ttcttttt--gagacagagtttaactcttgttgtccagactggagtgc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28496207 133 + 49145316 atatactttagtggtttttcg-tatatccacaaagctgtgcaaccattatcatg--------atctacttctagacattttctc-------tttttgtttttcttattttt--gagatgcagtttcactcttgttgcccaggctggagtgc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5339288 130 + 8899380 gtatactttagtg--ttttca-catatccacaaagctgtgcaaccattatcatg--------atctacttctagacattttctc-------tttttgttttt-ttattttt--gagatgcagtttcactcttgttgcccaggctggagtgc i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 301958 131 - 4471408 gtatactttagtggtttttca-tatatccacaaagctgtgcaaccattatcatg--------atctacttctagacattttctc--------ttttgttttt-ttattttt--gagatgcagtttcactcttgttgcccaggctggagtgc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5413095 143 + 5549422 acacagtctag-ggctctccc-tatattca----atcctgctgcttctcccgtttactgttcacaagcctgtggatatctatacacaaggtttttttttatt-ttttttttaagagacagagtctcact-ttgtcaccctcggtagaatgc i otoGar3.GL873654 I 185 C 0 e dasNov3.JH563638 254910 11419 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e panPan2.chr19 39825867 235 + 64411610 M a score=1166780.000000 s hg38.chr19_GL383574v1_alt 15285 142 + 155864 aat-ggcactatcttggctcacagcagcctccgcctcccggattcaagctattctcctgcctcagcctcccaagtaac-tgggattacaggcgtgcgcca-ccacgcctgactaa-tttttttgtgtt--tttagtagagacggggtt s panTro5.chr19 36074121 142 + 61309027 aat-ggcactatcttggctcacagcagcctccgcctcccggattcaagctattctcctgcctcagcctcccaagtaac-tgggattacaggcgtgcgcca-ccacgcctgactaa-tttttttgtgtt--tttagtagagacggggtt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39826102 142 + 64411610 aat-ggcactatcttggctcacagcagcctccgcctcccggattcaagctattctcctgcctcagcctcccaagtaac-tgggatttcaggcgtgcgcca-ccacgcctgactaa-tttttttgtgtt--tttagtagagacggggtt i panPan2.chr19 M 235 C 0 s gorGor5.CYUI01015150v1 6243832 143 - 8369475 aat-ggcactatcttggctcacagcagtctccgcctcccggattcaagctattctcctgcctcagcctcccaagtaac-tgggattacaggcgtgcgccacccacgcctgactaa-tttttttgtgtt--tttagtagagacggggtt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63838880 142 - 106955855 aat-ggcactatcttggctcactgcagcctccacctcctggattcaagctattctcctgcctcagcctcccaagtaac-tgggattacaggtgtgtgcca-ccacgcctgacaaa-tttttttgtatt--tttagcagagacggggtt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30146777 143 + 53671032 aat-ggcgctatcttggctcactacagcctccacctcctggattcaagtgattctcctgcctcagcctcccaagtagc-taggattacaggcgtgtacca-ccacgcctagctaattttttttgtatt--tttagtagaggcggggtt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34599640 143 + 59248254 aat-ggcgctatcttggctcactacagcctccacctcctggattcaagtgattctcctgcctcagcctcccaagtagc-taggattacaggcgtgtgcca-ccacgcctagctaattttttttgtatt--tttagtagaggcggggtt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4468027 142 - 13342542 aatgggcgct-tcttggctcactacagcctcca-ctcctggattcaagtgattctcctgcctcagcctcccaagtagcttaggattacagg-gcgtgcca-ccacgcctagctaattttttttgtatt--tttagtagaggcggggtt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5398536 143 + 7714307 aat-ggcgctatcttggctcactacagcctccacctcctggattcaagtgattctcctgcctcagcctcccaagtagc-taggattacaggcgtgtgcca-ccacgcctagctaattttttttgtatt--tttagtagaggcggggtt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29206374 141 + 50890351 aac-ggcactatcttggctcacttgaa--tctacctcccggattcaagtgattctcctgcctcagcctcccaagtagc-taggattataggcgtgtgcca-ccacgcctagctaattttttttgtatt--tttagtagagatgggatt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 819811 141 - 2385121 aat-ggcgatatcttggctcacttgaa--tccacctcccggattcaagtgattctcctgcctcagcttcccaagtagc-taggattataggcgtgtgcca-ccacgcctagctaattttttttgtatt--tttagtagagacagggtt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2265272 142 + 4274983 aat-gttgctatcttggctcactacagcctccacctcctggattcaagtgattctcctgcctcagcctcccaagtagc-taggattacaggcgtgtgcca-ccacgcctggctaa-tttttttgtatt--tttagtagagagggcgtt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28496340 141 + 49145316 aat-tgcaagaccttggctcactgcaacctccccctcccaggttcaagcgattctcctgcttcagcctcctgagtagc-tgggattacaggtatgtacca-ctatgccca-ctaa-tttttttgtatc--tttagtagagacagggtt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5339418 141 + 8899380 aat-tggaagaccttggctcactgcagcctctgcctcccaggttcaagcgattttcctgcttcggcctcctgagtagc-tgggattacaggtgtgtgcca-ccatgccca-ctaa-tttttttgtatt--tttagtagagacagggtt i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 302089 141 - 4471408 aat-tgcaagaccttggctcactgcagcctctgcctcccaggttcaagtgattctcctgcttcagcctcctgagtagc-tgggattataggtgtgtgcca-ccacgccca-ctaa-tttttttgtatt--tttagtagagacaaggtt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5413238 140 + 5549422 ----agtagcctcaaagctcacagcaacctccagctcttgggcttaggcgattctcttgcctcagcctgccaagaaac-tgggactaccggagcccgcca-caacgcctggcta--tttttttgttgcagtttggcaggggccaggtt i otoGar3.GL873654 C 0 I 3475 e dasNov3.JH563638 254910 11419 + 643850 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I a score=2748433.000000 s hg38.chr19_GL383574v1_alt 15427 361 + 155864 tcaccatgttggccag-gctag-tcttgacctcctgacctaaggcgatccaccagcctcggtct-ccgaaagtgctgggattacaggcacaagcccctgtgcccatcctacttccagacatttttatcaccccagaaagaaaccctgcgccccttggtagtgacttcccattcctactcctcacccccatgtcccagccccttgcagcc--------actaatctactaatattttctgcctctgtggattt--gcctgttcttggtgtttcttttttttttttttttttt-tttttttttgagacagagtctcgctctgtcgcccaggctgcagtgcctctcgagtagctggaattacaggcatgagccactga s panTro5.chr19 36074263 352 + 61309027 tcaccatgttggccag-gctag-tcttgacctcctgacctaaggcgatccaccagcctcggtct-ccgaaagtgctgggattacaggcacaagcccctgtgcccatcctacttccagacatttttgtcaccccagaaagaaaccctgcgccccttggtagtgacttcccattcctactcctcacccccatgtcccagccccttgcagcc--------actaatctactaatattttctgcctctgtggattt--gcctgttctTGGTGtttcttttttttttttttttttt----------gagacagagtctcgctctgtcgcccaggctgcagtgcctctcgagtagctggaattacaggcatgagccactgA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39826244 349 + 64411610 tcaccatgttggccag-gctag-tcttgacctcctgacctaaggcgatccaccagcctcagtct-ccgaaagtgctgggattacaggcacaagcccctgtgcccATCctacttccagacatttttgtcaccccagaaagaaaccctgcgccccttggtagtgacttcccattcctactcctcacccccatgtcccagccccttgcagcc--------actgatctactaatattttctgcctctgtggattt--gcctgttctTGGTG--tctttttttttttttttttgt-----------agacagagtctcgctctgtcgcccaggctgcagtgcctcttgagtagctggaattacaggcatgagccactga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6243975 370 - 8369475 tcaccatgttggccag-gctgg-tcttgacctcctgacctaaggcgatccaccagccttggtctcccaaaagtgctgggattacaggcacaag-ccctgtgcccgtcctgcttccagatatttttatcaccccagaaagaaaccctgcgccccttggtagtgacttcccattcctactcctcacccccatgtcccagccccttgcagccactaatctactaatctactaatattttctgcctctgtggattt--gcctgttcttggtgtttctttttttttttttttttttttttttttttgagacagagtctcgctctgtcgcccaggctgcagtgcctctcgagtagctggaattacaggcatgagccactgA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63839022 361 - 106955855 tcaccatgttggccag-gctgg-tcttgacctcctgacctaaggcaatccaccagcctcggtct-cccaaagtgctgggattacaggcacaagccattgtgcccgtcctacttccagacatttttatcaccccagaaagaaaccctgcaccccttggtagtgacttcccattcccactcctcacccccatgtcccagccccttgcagcc--------actaatccactaatattttctgcctctatggattt--gcctgttcttggcatttcttttttttttttttttttt-tttttttttgagacagagtctcgctttgtcgcccaggctggagtgcCTCTTGAGTAGCTGGAATTACAGGAATGAGCCACTGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30146920 360 + 53671032 tcaccatgttggccag-gctgg-tcttgaactcctgacctcaggtgatccaaccgcctcagtct-cccaaagtgctgggattacaggcatgagccattgcacctgtcctacttccagacatttttatcaccccagaaagaaaccctgcaccccttggtagtgacctcccatacccactcctcacccccatgtcccag-cccttgcagcc--------actaatccactaatattttctgcctctatggattt--gcgtgttcttggcatttcttttctttccttttctttt-tgtttttttgagacggagtctctctctgttgcccaggctggagtgcctcttgagtagctggaATTACAGGTATGAGCCACTGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34599783 360 + 59248254 tcaccatgttggccag-gctgg-tcttgaactcctgacctcaggtgatccaaccgcctcagtct-cccaaagtgctgggattacaggcatgagccattgcacctgtcctacttccagacatttttatcaccccagaaagaaaccctgcaccccttggtagtgacctcccatacccactcctcacccccatgtcccag-cccttgcagcc--------actaatccactaatattttctgcctctatggattt--gcgtgttcttggcatttcttttctttccttttctttt-tgtttttttgagacggagtctctctctgttgcccaggctggagtgcctcttgagtagctggaATTACAGGTATGAGCCACTGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4468169 361 - 13342542 tcaccatgttggccagtgctggttcttgaactcctgacctcaggtgatccaaccgcctcagtct-ccc-aagtgctgggattacaggcataagccattgcacctgtcctacttccagacatttttatcaccccagaaagaaaccctgcaccccttggtagtgacttcccatacccactcctcacccccatgtcccag-cccttgcagcc--------actaatccactaatattttctgcctctatggattt--gcgtgttcttggcatttcttttctttccttttctttt-tgtttttttgagacggagtctctctctgttgcccaggctggagtgcctcttgagtagctggaATTACAGGTATGAGCCACTGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5398679 360 + 7714307 tcaccatgttggccag-gctgg-tcttgaactcctgacctcaggtgatccaactgcctcagtct-cccaaagtgctgggattacaggcatgagccattgcacctgtcctacttccagacatttttatcaccccagaaagaaaccctgcaccccttggtagtgacttcccatacccactcctcacccccatgtcccag-cccttgcagtc--------actaatccactaatattttctgcctctatggattt--gcgtgttcttggcatttcttttcttttcttttctttt-tgtttttttgagacggagtctctctctgttgcccaggctggagtgcctcttgagtagctggaATTACAGGTATGAGCCACTGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29206515 356 + 50890351 tcaccatgttggccag-gctgg-tcttgaactcctgacctccggtgatccaaccgcctccgtcg-cccaaagtgctgggattacaggcatgagccattgcacctgtcctacttccagacatttttatcaccccagaaagaaaccctgcaccccttggtagtgacttcccattcccactcctcacccccatgtcccag-cccttgcagcc--------actaatccactaatattttctgcctctatggatctTGGCAt-ttcttttcttttctttt-----cttttctttt-TGtttttttgagatggagtctctctctgttgcccaggctggagtgcctcttgagtagctggaattacaggtatgagccACTGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 819952 354 - 2385121 tcaccatgttggccag-gctgg-tcttgaactcctgacctcaggtgatccaaccgcctcagtcg-cccaaagtgctgagattacaggcatgagccattgcacctgtcctacttccagacatttttatcaccccagaaagaaaccctgcacccctt-gtagtcacttcccattcccactcctcacctccatgtcccag-cccttgcagcc--------actaatccactaatattttctgcctctatggattt--gcgtgttcttggcatttctttt-----cctttctttt-tgtttttttgagacggagtctctctctgttgcccaggctggagtgcctcttgagtagctggaATTACAGGTATGAGCCACTGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2265414 351 + 4274983 tcaccatgttggccag-gctgg-tcttgaactcctgacctcaggtgatccaaccgcctcagtct-cccaaagtgctgggattacaggcatgaaccattgcacctgtcctacttccagacatttttatcacccctgaaagaaaccctgcaccccttggtagtgacttcccattcccactccttacccccatgtcccag-cccttgtagcc--------actaatccactaatattttctgcccctatggattt--gcgtgttcttggcatttctttt---------tttgtt-tgtttctttgagacggagtctcgctctgtcgcccaggctgaagtgcctcttgagtagctggaATTACAGGTATGAGCCACTGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28496481 335 + 49145316 tcaccatgtttgccag-gctgg-tctcaaactcgcgacctcacagggtccac------cggcct-cccaaagtgctgggattacaggtgtgagccactgtgccctgcttacttccagacattttcatcaccccaaaacgaaaccctgtacccattgagaatcacttcccattcccactcctcacccctatgtcccaggcctttgcagcc--------actaatccac---tattttctgcctctacggatct--gcctgttccaggca-----------------tttatt-tatttattttttacagaatctcactctgtcactcaggctggagtgcCTCTCAAGTAGCTGGAATTACAGAAATGAGCCACTGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5339559 341 + 8899380 tcaccatgtttgccag-gctgg-tctcgaactcctgacctcacaggatccacccacctcggcct-cccaaagtgttgggattacaggtgtgagccactgtgccctgccaacttccagacattttcatcaccccaaaaagaaaccctgtactcattggtagtcacttcccattcccactcttcacccctatatcccaggcccttgcagcc--------actaatccac---tattttctaactctatggatct--gcctgttTCAGGAt-----------------tttttt-tttttttttgagacagagtctcaatctgtcactcaggctggagtgcCTCTCAAGTAGCTGGAATTACAGAAATGAGCCACTGA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 302230 339 - 4471408 tcaccatgtttgccag-gctgg-tctcgaactcctgacctcacaggatccacccacctcggcct-cccaaagtgctgggattacagatgtgagccactgtgccctgcctacttccagacattttcatcaccccaaatagaaaccctgtacccattggtagtcatttcccattcccactcctcacccctatgtcccaggcccttgcagcc--------actaatcaac---tattttctgcctctatggatct--gcctgttccaggca-----------------tttttt-tttttttttgagacag--tcttactctgttgctcaggctggagtgcCTCTCAAGTAGCTGGAATTACAGAAATGAGCCACTGA i aotNan1.NW_018505377v1 C 0 C 0 e dasNov3.JH563638 254910 11419 + 643850 I e otoGar3.GL873654 5413378 3475 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I a score=-1500.000000 s hg38.chr19_GL383574v1_alt 15788 1 + 155864 C s panTro5.chr19 36074615 1 + 61309027 C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39826593 1 + 64411610 C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6244345 1 - 8369475 C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63839383 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30147280 1 + 53671032 G i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34600143 1 + 59248254 G i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4468530 1 - 13342542 G i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5399039 1 + 7714307 G i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29206871 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 820306 1 - 2385121 G i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2265765 1 + 4274983 G i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28496816 1 + 49145316 G i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5339900 1 + 8899380 G i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 302569 1 - 4471408 G i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 377562 1 - 643850 c i dasNov3.JH563638 n 11419 C 0 e otoGar3.GL873654 5413378 3475 + 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I a score=18857.000000 s hg38.chr19_GL383574v1_alt 15789 2 + 155864 AG s panTro5.chr19 36074616 2 + 61309027 AG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39826594 2 + 64411610 AG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6244346 2 - 8369475 AG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63839384 2 - 106955855 AG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30147281 2 + 53671032 AG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34600144 2 + 59248254 AG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4468531 2 - 13342542 AG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5399040 2 + 7714307 AG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29206872 2 + 50890351 AG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 820307 2 - 2385121 AG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2265766 2 + 4274983 AG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28496817 2 + 49145316 AG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5339901 2 + 8899380 AG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 302570 2 - 4471408 AA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 132619 2 - 5549422 aa i otoGar3.GL873654 n 3475 C 0 s dasNov3.JH563638 377563 2 - 643850 at i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 4558393 1475 - 122678785 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I a score=5080483.000000 s hg38.chr19_GL383574v1_alt 15791 506 + 155864 TGAGCTTATCCTTTTTccatct-----gtaa-----c-----aatttccaaatgtacacctccatttcagatctcctgacttttagggtcataccaattatgaaat--agacgcaattgctt-gg-----tgtcccaacaggcacttccagctcaacaagtgc-aaaattATTTGCATCTATTAGTATTTCCATCCTCCCCCC--------------AAATAAA-CTTCCTTTTATCCGTTCTCCTTATGCTCATCACTAGCCCTAGGACTGACCTAGGTGTTCAGTCCTGGAACTAGGAGTCCTTATCTGGCTACACCCAAT-------CAGTCACCAATCTGTTAGATTCTACTTTATGTTTTGCAACTCATGGTTTCCTGCACCCTAGGGCGGCAGGAACTATGTATAA-TGCAGCTGATCAGT-TGGTAGCCCCTAGTGTAATATGCACATTAATCTCCGTTTCATGTACTAGAAACAAGGTTGAGAACCGTG----ACACATTTTATGACCATCGCAGGCTTCCTAAAGATCCAAAATCCATTGTTGCTTCCC s panTro5.chr19 36074618 506 + 61309027 TGAGCTTATCCTTTTTccatct-----gtaa-----c-----aatttccaaatgtacatctccatttcagatctcctgacttttagggtcataccaattatgaaat--agacgcaattgctt-gg-----tgtcccaacaggcacttccagctcaacaagtgc-aaaattATTTGCATCTATTAGTATTTCCATCCTCCCCCC--------------AAATAAA-CTTCCTTTTATCCATTCTCCTTATGCTCATCACTAGCCCTAGGACTGACCTAGGTGTTCAGTCCTGGAACTAGGAGTCCTTATCTGGCTACACCCGAT-------CAGTCACCAATCTGTTAGATTCTACTTTATGTTTTGCAACTCATGGTTTCCTGCACCCTAGGGCGGCAGGAACTATGTATAA-TGCAGCTGATCAGT-TGGTAGCCCCTAGTGTAATATGCACATTAATCTCCGTTTCATGTACTAGAAACAAGGTTGAGAACCGTG----ACACATTTTGTGACCATCGCAGGCTTCCTAAAGATCCAAAATTCATTGTTGCTTCCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39826596 506 + 64411610 TGAGCTTATCCTTTTTccatct-----gtaa-----c-----aatttccaaatgtacatctccatttcagatctcctgacttttagggtcataccaattatgaaat--agacgcaattgctt-gg-----tgtcccaacaggcacttccagctcaacaagtgc-aaaattATTTGCATCTATTAGTATTTCCATCCTCCCCCC--------------AAATAAA-CTTCCTTTTATCCATTCTCCTTATGCTCATCACTAGCCCTAGGACTGACCTAGGTGTTCAGTCCTGGAACTAGGAGTCCTTATCTGGCTACACCCGAT-------CAGTCACCAATCTGTTAGATTCTACTTTATGTTTTGCAACTCATGGTTTCCTGCACCCTAGGGCGGCAGGAACTATGTATAA-TGCAGCTGATCAGT-TGGTAGCCCCTAGTGTAATATGCACATTAATCTCCGTTTCATGTACTAGAAACAAGGTTGAGAACCGTG----ACACATTTTGTGACCATCGCAGGCTTCCTAAAGATCCAAAATTCATTGTTGCTTCCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6244348 506 - 8369475 TGAGCTTATCCTTTTTccatct-----gtaa-----c-----aatttccaaatttacatctccatttcagatctcctgacttttagggtcataccaattatgaaat--agacgcaattgctt-gg-----tgtcccaacaggcacttccagctcaacaagtgc-aaaattATTTGCATCTATTCGTATTTCCATCCTCCCTCC--------------AAATAAA-CTTCCTTTTATCCATTCTCCTTATGCTCATCACTAGCCCTAGGACTCACCTAGGTGTTCAGTCCTGGAACTAGGAGTCCTTATCTGGCTACACCCAAT-------CAGTCACCAATCTGTTAGATTCTACTTTATGTTTTGCAACTCATGGTTTCCTGCACCCTAGGGCGGCAGGAACTATGTATAA-TGCAGCTGATCAGT-TGGTAGCCCCTAGTGTAATATGCACATTAATCTCCATTTCATGTACTAGAAACAAGGTTGAGAACCATG----ACACATTTTGTGACCATCGCAGGCTTCCTAAAGATCCAAAATCCATTGTTGCTTCCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63839386 506 - 106955855 TGAGCTTACCCTTTTTccatct-----ataa-----c-----aatttccaaatttacatctccatttcaaatctcctgacttttagggtcataccaattatgagac--agatgcaattgctt-gg-----tgtcccaacaggcacttccagctcaacaagtgc-aaaattatctgcatctattaatatttccatcctcccctc--------------aaataaa-ctaccttttatccattctccttatgcccatcactggccctaggactcacctaggtgttcagtcctggaactaggagtccttatctggctacacccaat-------cagtcaccaacctggtagattctactttATGTTTTGCAACTCATAGTTTCCTGCACTCTAGGGCATCAGGAACTATGTATAA-TGCAGCTGATCAGC-TGGTAGCCCATAGTGTAATATGCACATTAATCTCCGTTTCATGTACTACAAACAAGGTTGAGAACTGTG----ACACATTTTGTGACCATCGCAGCCTTCCTAAAGATCCAAAATCCATTGTTGTTTCCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30147283 495 + 53671032 TGAGCTTATCCTTTTTccatct-----ataa-----c-----aatttccaaatttacatctccatttcagatctcccgacttttagggtcataccaactatgaagt--agatggaattgctt-gg-----tgtcccaacaggcacttccagctcaacaagtgc-aaaattatctacatctattaatatttccatcccccccac--------------aaataaa-ctgccttttatccattctccttatgcccgtcactggccctaggactcaccaaggtgttcagtcctggaactgggagtccttaactggctacaaccaat-------cagtcaccaatcttgtagcttctacgttATGTTTTGCAACTCATGGCTTCCTGCACCCTAGGGCAGCAGGAACTATGTATAA-TGCAACTGATCAGT-TGGTAGCCCATAGTGTAATAAGCACATTAATCTCCGTTTCGTGTACTAGAAACAAGGTTGAGAACTGTG----ACA-----------CATCGCAGGATTCCTAAAAATCCAAAATCCATTGTTGCTTCCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34600146 495 + 59248254 TGAGCTTATCCTTTTTccatct-----ataa-----c-----aatttccaaatttacatctccatttcagatctcccgacttttagggtcataccaactatgaagt--agatggaattgctt-gg-----tgtcccaacaggcacttccagctcaacaagtgc-aaaattatctacatctattaatatttccatcccccccac--------------aaataaa-ctgccttttatccattctccttatgcccgtcactggccctaggactcaccaaggtgttcagtcctggaactgggagtccttaactGGCTACAACCAAT-------CAGTCACCAATCTTGTAGCTTCTACGTTATGTTTTGCAACTCATGGCTTCCTGCACCCTAGGGCAGCAGGAACTATGTATAA-TGCAACTGATCAGT-TGGTAGCCCATAGTGTAATATGCACATTAATCTCCGTTTCGTGTACTAGAAACAAGGTTGAGAACTGTG----ACA-----------CATCGCAGGATTCCTAAAAATCCAAAATCCATTGTTGCTTCCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4468533 495 - 13342542 TGAGCTTATCCTTTTTccatct-----ataa-----c-----aatttccaaatttacatctccatttcagatctcccgacttttagggtcataccaactatgaagt--agatggaattgctt-gg-----tgtcccaacaggcacttccagctcaacaagtgc-aaaattATCTACATCTATTAATATTTCCATCCCCCCCAC--------------AAATAAA-CTGCCTTTTATCCATTCTCCTTATGCCCATCACTGGCCCTAGGACTCACCAAGGTGTTCAGTCCTGGAACTGGGAGTCCTTAACTGGCTACAACCAAT-------CAGTCACCAATCTTGTAGCTTCTACTTTATGTTTTGCAACTCATGGCTTCCTGCACCCTAGGGCAGCAGGAACTATGTATAA-TGCAACTGATCAGT-TGGTAGCCCATAGTGTAATATGCACATTAATCTCCGTTTCGTGTACTAGAAACAAGGTTGAGAACTGTG----ACA-----------CATCGCAGGATTCCTAAAAATCCAAAATCCATTGTTGCTTCCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5399042 493 + 7714307 TGAGCTTATCCTTTTTccatct-----ataa-----c-----aatttccaaatttacatctccatttcagatctcccgacttttagggtcataccaactatgaagt--agatggaattgctt-gg-----tgtcccaacaggcacttccagctcaacaagtgc-aaaattATCTACATCTATTAATATTTCCAT-CCCCCCAC--------------AAATAAA-CTGCCTTTTATCCATTCTCCTTATGCCCATCACTGGCCCTAGGACTCACCAAGGTG-TCAGTCCTGGAACTGGGAGTCCTTAACTGGCTACAACCAAT-------CAGTCACCAATCTTGTAGCTTCTACTTTATGTTTTGCAACTCATGGTTTCCTGCACCCTAGGGCAGCAGAAACTATGTATAA-TGCAACTGATCAGT-TGGTAGTCCATAGTGTAATATGCACATTAATCTCCGTTTCGCAAACTAGAAACAAGGTTGAGAACTGTG----ACA-----------CATCGCAGGATTCCTAAAAATCCAAAATCCATTGTTGCTTCCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29206874 494 + 50890351 TGAGCTTATCCTTTTTCCATCT-----ATAA-----C-----AATTTCCAAATTTACATCTCCATTTCATATCTCCCGACTTTTAGGGTCATACCAACTATGAAGT--AGATGGAATTGCTT-GG-----TGTCCCAACAGGCACTTCCAGTTCAACAAGTGC-AAAATTATCTACATCTATTAATATTTCCAT-CCCCTCAC--------------AAATAAA-CTGCCTTTTATCCATTCTCCTTATGCCCATCACTGGCCCTAGGACTCACCAAGGTGTTCAGTCCTGGAACTGGGAGTCCTTAACTGGCTACAACCAAT-------CAGTCACCAATCTTATAGCTTCTACTTTATGTTTTGCAACTCATGGTTTCCTGCACCCTAGGGCAGCAGGAACTATGTATAA-AGCAACTGATCAGT-TGGTAGCCCATAGTGTAATATGCACATTAATCTCCGTTTCGTGTACTAGAAACAAGGTTGAGAACTGTG----ACA-----------CATCGCAAGATTCCTAAAAATCCAAGATCCATTGTTGCTTCCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 820309 494 - 2385121 TAAGCTTATCCTTTTTccatct-----ataa-----c-----aatttccaaatttacatctccatttcagatctcccgacttttagggtcataccaactatgaagt--agatggaattgctt-gg-----tgtcccaacaggcacttccagctcaacaagtgc-aaaattatctacatctattaatatttccat-ccccccac--------------aaataaa-ctgccttttatccattctccttatgcccttcactggccctaggactcaccaaggtgttcagtcctggaactgggagtccttaactggctacaaccaat-------cagtcaccaatcttgtagcttctactttATGTTTTGCAACTCATGGTTTCCTGCACCCTAGGGCAGCAGGAACTATGTATAA-TGCAACTGATCAGT-TGGTAGTCCATAGTGTAATATGCACATTAATCTCCGTTTCGTGTACTAGAAACAAGGTTGAGAACTGTG----ACA-----------CATCGCAGGATTCCTAAGAATCCAAAATCCATTGTTGCTTCCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2265768 495 + 4274983 TGAGCTTATCCTTTTTccatct-----ataa-----c-----aatttccaaatttacatctccatttcagatctcccgacttttagggtcataccaactacgaagt--agatggaattgctc-gg-----tgtcccaacaggcacttccagctcaacaagtgc-aaaattATCTACATCTGTTAATATTTCCATCCTCCCCCC--------------AAATAAA-CTGCCTTTTATCCATTCTCCTTATGCCCATCACTGGCCCTAGGACTCACCAAGGTGTTCAGTCCTGGAACTAGGAGTCCTTAACTGGCTACAACCAAT-------CACTCACCAATCTTGTAGCTTCTACTTTATGTTTTGCAACTCATGGTTTCCTGCATCCTAGGTCAGCAGGAACTATGTATAA-TGCAACTGATCAGT-TGGTAGCCCATAGTGTAATATGCACATTAATCTCCGTTTCCTGTACTAGAAACAAGGTTGAGAACTGTG----ACA-----------CATCGCAGGATTCCTAAAAATCCAAAATCCATTGTTGCTTCCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28496819 512 + 49145316 CGAGCTTATCC-TTTTccatct-----ataa-----c-----aatttccaaatttacatctccattccagatctcccgacttctagggtcataccaactacaaagt--agatgcaattgctcagg-----tgtcccaacaggcacttccagatcaacaagggc-aaaattACCTGCATCTATTAATATTTTCATCCTCCCACC--------------AAATAAG-CTGCTCTTTATCCACTCTCCTTATGCCCATCACTGGCCCTAGGACTCACTTAGGTGTTCGGTCCTGGAACTAGGAGTCCTTATCTGGCTACACCCAATCAGTCACCAGTCACCAATCTTGTAGATTCTACTTTATGTTTTGAAACTCATGGTTTCCTGCACCATACTGTGGCAGGAACTAGGCATAA-TGCAGCT-ATTGAT-TGGTAGCCCGTAGTGTAATATGCACATTAATCTCCATTTCATGTACTAGAAACAACGTTGAGAACTGTG----ACATATTTTGTGACCATCACAAGCTTCCTAAAAATCAAAAATCCATGGTTGCTTCCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5339903 505 + 8899380 CGAGCTTATCC-TTTTccatct-----ataa-----c-----aattcccaaatttacatctccatttcagatctcccgacttctagggtcataccaactatgaagt--agatgcaattgcttggg-----tgtctcaacaggcacttccagatcaacaagggc-aaaattatctgcatctattaatattttcatcttcccgct--------------aaataaa-ctgctctttatccattctccttatgcccatcactggccctaggactcacttaggtgttcagtactggaactaggagtccttatctggctacacccaatcagtcaccagtcaccaatcttgtagattctactttATGTTTTGCAACTCATGGTTTCCTGCACCGTAGTGTGGCAGGAACTGG--------GCAGCT-ATCAAT-TGGTAGCCTACAGTGTAATATGCACATTAATTTCCATTTCATGTACCAGAAACAAGGTTGAGAACTGTG----ACATATTTCGTGACCATCTTAAGCTTCCTAAAAATCCAAAATCCATTGTTGCTTCCC i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 302572 512 - 4471408 CGAGCTTATCC-TTTTccatct-----ataa-----c-----aatttccaaatttacatctccatttcagatctctcgacttctagggtcataccaactaagaagt--agatgcaattgcgcggg-----tgtcccaacaggcacttccagatcaacaagggc-aaaattATCTGCATCTATTACTATTTTCATCCTCCCACC--------------AAATAAA-CTGCTCTTTATCCACCCTCCTTATGCCCATCACTGGGCCTAGGACTCACTTAAGTGTTCAGTCCTGGAACTAGGAGTCCTTATCTGGCTACACCCAATCAGTCACCAGTCACCAATCTTGTATATTCTACTCTATATTTTGCAACTCATGGTTTCCTGCACCGTAGTGTGGCAGGAACTAGGCATAA-TGCAGCT-ATTGAT-TGGTAGCGCGTAGTGTAATATGCACATTAATTTCCGTTTCATGTACCAGAAACAAGGTTGAGAACTGTG----ACATATTTTGTGACCATCACAAGCTTCCTAAAAATCCAAAATCCATTGTTGCTTCCC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 132621 485 - 5549422 tgagctcatcc-tttcctatct-----acaaactgga-----aattcccaaatttacaaatccattccagatctccggactgccatggccgtgataacttcttggt---gatgcaattgcttgga-----tgtccc-acaggcactttcag--cagaatgtgc-aaaattacctgcatctacttgt------ctcctctctcc--------------aaataaa-ctgccgttta-ccacattctctgtactcatcactggcCTTAGGACCCACTTAGGTGTCCAATCCTTAAACCAGGATTTCTTATCTAG-TATACCCCAT-------AAGTCACCAATCTTGCAGATTCTGCTTTATGTTCTGCAAGTCATAGTTTTCTGTACTATAGAACACGAGGAACTATGCATAA-TGCAGCTGATTGGTATGGTATCCTGTGGTGTATTGTACATATGAATTTCTATTTTATGGGCTAGAAAGAAGATTGAGAACTGTT----AC------------TGTAGCAGCATCCT--AAAATCCAAAACCC-CTGTTGCTATCC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 118118958 510 + 122678785 TGAGCTCATCC-TTTTccgtctcaaagctga-----t-----gattccccaatttacatgctcattcaggatctcccaacttcca-ggtcacacaaactgtactttccagaggcaattgctt-gggggcatgtctc-acaggcacttccaactcaatatgttcaaaaataatctgcatttatacacttt------cttcccct--------------aaataaacctgccctttatccacgctcctcattcccatcACTGGCCCCAGGACTCAGTGGGGTGTGCAATACTGAAACCAAGAGTAGTCCTCTAGCTATACCCCAT-------GGATCACCACTCTTGTTGCTCCTACTTAATGCCTTGCAACTCCTGGTTTCTTGCACCCTGTGGCACCAGGAACCATGCGTAATTGCAACTTATCAGTGTGATAGCCCATATTATACTATATATATGAATCTCTATCTTGTGTGCTAGAAA-ATGGTTGAGAACTGCGTGCAGCGTGTTTCATTATCAT-----GCCTTCCAAAAACCCAAATCCCAT-ATTGCTCCCC i canFam3.chr1 n 1475 T 71582 s dasNov3.JH563638 377565 441 - 643850 tgaactcatcc--tttccatct-----ataa-----cctggtgattcctgaaatcacatctccattacagatc-cctgacttccaggaccatattacctac----t--agatgcaattgcttggg-----tgttcc-acaggcatttcaaactcagtgtgccc-caaattatccccatctat-----cccttaccctccccacacaCACATCACAAAAAGTAAACCTGCTCTTTGTCTATGCTTCCTATCCCTATCACGGGCCCCAGGACTCACTCAGGTGTCCAACCCTGAAAGCAGGAGTACTTATCTAGCTGCACCCAAT-------CAGTCACCAA---------------------------AACTTATG------------------CACCAGAAACTATGTATAAATGCAATTGATCAGAGTGGTAG-CCATGGTATATTATTCATTTGAACCACCAACTTATGTGCTAGAAAAAAAA----------------TCA---------------GCAGTTTTCCTAAAG--CCCAAATTCCCTGTTGCTTCCC i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111047473 2781 - 145441459 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I a score=3725326.000000 s hg38.chr19_GL383574v1_alt 16297 397 + 155864 TGCTTAAGA----------GCTCCCGGCAACCTGCAGAAAAA----CTAAA-TTCTTCCCCATTCATG-TTTTC--AGcagtagaagctctagaatttctacac----ttgaggagctatggggtaa-----------gaaagaagatctggaggatttgcgaggcttgtccaaagc--aattcccagctagtacactg-ttttttccttatatttgtctttactt--tatgaggcta-ggggatggctgttggacaatatgggagaaacaaagccctcaaccctcacca-cctttggtgtggccactgCTATC------CACTATAACTCCTAATATA--CTCTGCATTCTTTAGGCTGTGGCCACACTGAATTGCTTA---------------CTTTCC---------------------AGAA--TGCATCTCACTCTTCCTCCT---GTAATCACTC---CATC---TCCTGTTTGATCTGAAA-GCTT- s panTro5.chr19 36075124 397 + 61309027 TGCTTAAGA----------GCTCCCGGCAGCCTGCAGAAAAA----CTAAA-TTCTTCCCCATTCATG-TTTTC--AGcagtagaagctctagaatttctacac----ttgaggagctatggggtaa-----------gaaagaagatctggaggatttgcgaggcttgtccaaagc--aattcccagctagtacactg-ttttttccttatatttgtctttactt--tatgaggcta-ggggatggctgttggacaacatgggagaaacaaagccctcaaccctgacca-cctttggtgtggccactgCTATC------CACTATAACTCCTAATACA--CTCTGCATTCTTTAGGCTGTGGCCACACTGAATTGCTTA---------------CTTTCC---------------------AGAA--TGCATCTCACTCTTCCTCCT---GTAATCACTC---CATC---TCCTGTTTGATCTGAAA-GCTT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39827102 397 + 64411610 TGCTTAAGA----------GCTCCCGGCAGCCTGCAGAAAAA----CTAAA-TTCTTCCCCATTCATG-TTTTC--AGcagtagaagctctagaatttctacac----ttgaggagctatggggtaa-----------gaaagaagatctggaggatttgcgaggcttgtccaaagc--aattcccagctagtacactg-ttttttccttatatttgtctttactt--tatgaggcta-ggggatggctgttggacaatatgggagaaacaaagccctcaaccctcacca-cctttggtgtggccactgCTATC------CACTATAACTCCTAATACA--CTCTGCATTCTTTAGGCTGTGGCCACACTGAATTGCTTA---------------CTTTCC---------------------AGAA--TGCATCTCACTCTTCCTCCT---GTAATCACTC---CATC---TCCTGTTTGATCTGAAA-GCTT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6244854 395 - 8369475 TGCTTAAGA----------GCTCCCGGCAGCCTGCAGAAAAA----ATAAA-TTCTTCCCCATTCATG-TTTTC--AGcagtagaagctctagaatttctacac----ttgaggagctgtggggtaa-----------gaaagaagatctggaggatttgcgaggcttgtccaaag---aattcccagctggtacactg-ttttttcc-tatatttgtctttactt--tatgaggcta-ggggatggctgttggacaatatgggagaaacaaagccctcaaccctcacca-cctttggtgtggccactgCTATC------CACTATAACTCCTAATATA--CTCTGCATTATTTAGGCTGTGGCCACACTGAATTGCTTA---------------CTTTCC---------------------AGAA--TGCATCTCACTCTTCCTCCT---GTAATCACTC---CATC---TCCTGTTTGATCTGAAC-GCTT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63839892 397 - 106955855 TGCTTAAGA----------GCTCCCGGTAGCCTGTAGAAAAA----ATAAA-TTCTTCCCCATTCATG-TTTTC--AGcagtagaagctctagaatttctacac----ttgaggagctatggggtaa-----------ga---aagatctggaagatttgcaaggcttgtccaaagc--aattcccacctagtacactg-ttttttccttgtatttgt-----ctt--tatgaggcta-ggggatggctgttggacaatacgggagaaacaacgccctcaaccctcacca-cctttggtgtggccactgCTATCCACTATCACTATAACTCCTAATATA--CTCTGCATACTGtaggctctggccacactgaattgctta---------------ctttcc---------------------AGAATGTGTATCTCACTCTTCCTCCT---GTAATCACTC---CATC---TCCTGTTTGATCTGAAA-GCTT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30147778 399 + 53671032 TGCTTAAAA----------GCTCCTGGCAGCCTGTGGAAAAA----ATAAA-TTCTTCCCCATTAATG-TTTTC--AGcagtagaagctctagaatttctacac----ttgaggagctatggggtaa-----------gaaagaagatctggaggctttgcgaggcttgtccaaagc--aattcccagctagtacactg-ttttttccttatatttgtctctattt--tatgaggcta-ggggatggctgttggacaacacgggagaaacaaggccctcaaccctcacca-cctttggtgtggccactgCTATC------CACTATAACTCCTAATATA--TTCTGCATACTTTAGGCTCTGGCCATATTGAATTGCTTA---------------CTTTCC---------------------AGAACATATATCTCACTCTTCCTCCT---GTAATCACTC---CATC---TCCTGTTTGATCTGAAA-GCTT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34600641 399 + 59248254 TGCTTAAAA----------GCTCCTGGCAGCCTGTGGAAAAA----ATAAA-TTCTTCCCCATTAATG-TTTTC--AGcagtagaagctctagaatttctacac----ttgaggagctatggggtaa-----------gaaagaagatctggaggctttgcgaggcttgtccaaagc--aattcccagctagtacactg-ttttttccttatatttgtctctattt--tatgaggcta-ggggatggctgttggacaacacgggagaaacaaggccctcaaccctcacta-cctttggtgtggccactgCTATC------CACTATAACTCCTAATATA--TTCTGCATACTTTAGGCTCTGGCCATATTGAATTGCTTA---------------CTTTCC---------------------AGAACATATATCTCACTCTTCCTCCT---GTAATCACTC---CATC---TCCTGTTTGATCTGAAA-GCTT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4469028 399 - 13342542 TGCTTAAAA----------GCTCCTGACAGCCTGTAGAAAAA----ATAAA-TTCTTCCCCATTAATG-TTTTC--AGcagtagaagctctagaatttctacac----ttgaggagctatggggtaa-----------gaaagaaaatctggaggctttgcgaggcttgtccaaagc--aattcccagctagtacactg-ttttttccttatatttgtctctattt--tatgaggcta-ggggatggctgttggacaacacgggagaaacaaggccctcaaccctcacca-cctttggtgtggccactgCTATC------CACTATAACTCCTAATATA--TTCTGCATGCTTTAGGCTCTGGCCATATTGAATTGCTTA---------------CTTTCC---------------------AGAACATATATCTCACTCTTCCTCCT---GTAATCACTC---CATC---TCCTGTTTGATCTGAAA-GCTT- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5399535 396 + 7714307 TGCTTAAAA----------GCTCCTGGCAGCCTGTAGAAAAA----ATAAA-TTATTCCCCATTAATG-TTTTC--AGcagtagaagctctagaatttctacac----ttgaggagctatggggtaa-----------gaaag---atctggaggctttgcgaggcttgtccaaagc--aattcccagctagtacacta-ttttttccttatatttgtctctattt--tatgaggcta-ggggatagctgttggacaacacgggagaaacaaggccctcaaccctcacca-cctttggtgtggccactgCTATC------CACTATAACTCCTAATATA--TTCTGCATACTTTAGGCTCTGGCGATATTGAATTGCTTA---------------CTTTCC---------------------AGAACATATATCTCACTCTTCCTCCT---GTAATCACTC---CATC---TCCTGTTTGATCTGAAA-GCTT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29207368 400 + 50890351 TGCTTAAAA----------GCTCCTGGCAGCCTGTAGAAAAA----ATAAA-TTCTTCCCCATTAATG-TTTTC--AGcagtagaagctctagaatttctacac----ttgaggagctatggggtaa-----------gaaagaagatctggaggctttgcgaggcttgtccaaagc--aattcccagctagtacactgtttttttccttatatctgtctctattt--tatgaggtta-ggggatggctgttggacaacacgggagaaacaaagccctcaaccctcacca-cctttggtgtggccactgCTGTC------CACTATAACTCCTAATACA--TTCTGCATACTTTAGCCTCTGGCCATATTGAACTGCTTA---------------CTTTCC---------------------AGAACGTATATCTCACTCTTCCTCCT---ATAATCACTC---CATC---TCCTGTTTGATCTGAAA-GCTT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 820803 399 - 2385121 TGCTTAAAA----------GCTCCTGGCAGCCTGTAGAAAAA----ATAAA-TTCTTCCCCATTAATG-TTTTC--AGcagtagaagctctagaatttctacac----ttgaggagctatggggtaa-----------gaaagaagatctggaggctttgcgaggcttgtccaaagc--agttcccagctagtacactg-ttttttccttatatttgtctctattt--tatgaggcta-ggggatggctgttggacaacatgggagaaacgaggccttcaaccctcacca-cctttggtgtggccactgCTATC------CACTGTAACTCCTAATATA--TTCTGCATACTTTAGGCTCTGGCCATATTGAATTGCTTA---------------CTTTCC---------------------AGAACATATATCTCACTCTTCCTCCT---GTAATCACTC---CATC---TCCTGTTTGATCTGAAA-GCTT- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2266263 399 + 4274983 TGCTTAAGA----------GCTCCTGGCAGCCTGTAGAAAAA----ATAAA-TTATTCCCCATTAATG-TTTTC--AGcagtagaagctctagaatttctatac----ttgaggagctatgtggtaa-----------gaaagaagatctggaagatttgcgaggcttgtccaaagc--aattcccagctagtacactg-tttttcccttatatttgtctctattt--tatgaggtta-gaggatggctgttggacaatacaggagaaacaaagcccttaaccctcacca-cctttggtgtggccactgCTATC------CACTATAACTCCAAATACA--TTCTGCATACTTTAGGCTCTGGCCATATTGAATTGCTTA---------------CTTTCC---------------------AGAATGTATATCTCACTCTTCCTCCT---GTAATCACTC---CATC---TCCTGTTTGATCTGAAA-GCTT- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28497331 393 + 49145316 TGCTTAAGA----------GCTCCTGGTAGCTTGTAGAAAAA----ATAAA-TTCTTCCTCATTAATG-TTTTC--AGcagtagcagctctagaatttcttcac----ttgaggagctatggggaag-----------gagaggagacctgaaggatctgtgaggcttctccaaagc--aactcctatctagtacactg-tcttttccctatatttgtctttactt----tgaggcta-gggtatggctgatggacaatatgggagaaacaag-------cccctcacca-tctttgctgtggccactgCTATT------CACTGTAACTCCTAATATA--CTCTGCATACCTTAGGCTCTGGCCACACTGAATTGCTTC---------------CTTCCC---------------------AGAACATATATCTCACTCTTCCTCCT---GTAATCACTC---CTTCATCTCCTGTTTGATCTGAAA-GCtt- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5340408 390 + 8899380 TGCTTAAGA----------GCTCCTGATAGCTTGTAAAAAAT----ATAAA-TTCTTCCTCATTAATG-TTTTC--AGcagtagcagctctagaatttcttcac----ttgaggagctatggggtag-----------gagaggagacctgaaggatttgtgaggcttctccaaagc--aattcctatctagtacactg-tcttttccctatatttgtctttactt----tgaggcta-ggggatggctgatgggcaatatgggagaaacaag-------cccctcacca-cctttgctgtggccactgCTATT------CATTTTAACTCCTAATATA--CTCTGCATACctc-tgctctgaccacactgaattgctta---------------cttccc---------------------agaacaTATATCTCACTCTTCCTCCT---GTAATCATTC---CTTCA--TCCCGTTTGATCTGAAA-GCtt- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 303084 391 - 4471408 TGCTTAAGA----------GCTCCTGGTAGCTTGTAGAAAAT----ATAAA-TTCTTCCTCATTAATG-TTTTC--AGcagtagcagctctagaatttcttcac----ttgaggagctatggggtag-----------gagaggagacctgaaggatttgtgaggcttctccaaagc--aattcctatctagtacactg-tcttttccc-at-tttgtctttactt----tgaggcta-ggggatggctgatggacaatatgggagaaacaag-------cccctcacca-cctttgctgtggccactgCTATT------CACTTTAACTCCTAATATA--CTCTGCATACCTTAGGCTATGGCCACACTGAATTGCTTG---------------CTTCCC---------------------AGAACATATATCTCACTCTTCCTCCT---GTAATCACTC---CTTCATCTCCTGTTTGATCTGAAA-GCtt- i aotNan1.NW_018505377v1 C 0 I 989 s otoGar3.GL873654 133106 436 - 5549422 TACTT--------------GTTTCCAGTAGCCTACAGGAAAA----AAAAATTTCTTCCCCATTGAAACTTTTC--AGCAATATAAgctctagaatttctacgt----tggaagggctcaggggtgacagaat-gttggaaggagagactgggagtattg-gagacttgtctaaagc--tgtt-ctacctagt---ctt-atatttgtttatatttgtttttgctc--tgtgagactg-ggaggtgggtgatggagaatatgagagaaacaagg--------cctcaccagcctttggtgtggccactgCTATT------CATTGCAATTCCTAGCATACTCTCTGCACACCTTAGGCTCTGGCCACACTGAATTGCTTCTCAGAACATATGTCTCTTGCCtatattaaaaaaaaaaaaaaaaGAACATACGTCTCGCTCTCCCTCCT---GTAATCATTC---CTTCATCTCCTGTTTGGTCTGAAATGCT-- i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 378006 419 - 643850 TGCTTAAGAGCTGTTGTTGGCTCCCAGTATCCTACAGAAAAAAATTATAGC-TCCCTCTCCATTGAAC-ATTCTAGAGcagcagaagttctagaatttctatatcacacacagggattaagagatgacaatccaattggaagggagaccagtaggactgg--agttttctttaaagttgtacttccaactagtatactg-tttttaacttatgtttgtctttgcttgagatggggtggtggtggtggctgttgaagaatgtgggAAA-------------ACCCAGATAT-CGTTTGGTTTAGTCACTGCTATG--TGGGCAC-----------ATACT--CTTTTCACACCTTAGGCCCTGGCCACACAGAATTTCTT----------------CTTCCT---------------------GGAACATACTTCTCACTTGCCCTCCCTGAGCATTCATTCAGTCATC---TCCTGTTTGATCTGAAA-GGCTC i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 118119468 71582 + 122678785 T e cebCap1.NW_016107633v1 1553874 882 - 2680843 I a score=19243.000000 s hg38.chr19_GL383574v1_alt 16694 2 + 155864 CT s panTro5.chr19 36075521 2 + 61309027 CT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39827499 2 + 64411610 CT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6245249 2 - 8369475 CT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63840289 2 - 106955855 CT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30148177 2 + 53671032 CT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34601040 2 + 59248254 CT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4469427 2 - 13342542 CT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5399931 2 + 7714307 CT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29207768 2 + 50890351 CT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 821202 2 - 2385121 CT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2266662 2 + 4274983 CT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28497724 2 + 49145316 tt i calJac3.chr22 C 0 I 318 s saiBol1.JH378197 5340798 2 + 8899380 tt i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 133542 2 - 5549422 CT i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 378425 2 - 643850 CT i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 118119468 71582 + 122678785 T e aotNan1.NW_018505377v1 303475 989 - 4471408 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I a score=127345.000000 s hg38.chr19_GL383574v1_alt 16696 17 + 155864 TAATCCCATCTCTATTT s panTro5.chr19 36075523 17 + 61309027 TAATCCCACCTCTATTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39827501 17 + 64411610 TAATCCCACCTCTATTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6245251 17 - 8369475 TAATCCCATCTCTATTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63840291 17 - 106955855 TAATCCCATCTCTATTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30148179 17 + 53671032 TAATCCCATCTCCATTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34601042 17 + 59248254 TAATCCCATCTCCATTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4469429 17 - 13342542 TAATCCCATCTCCATTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5399933 17 + 7714307 TAATCCCATCTCCATTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29207770 17 + 50890351 TAATCCCATCTCCATTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 821204 17 - 2385121 TAATCCCATCTCCATTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2266664 17 + 4274983 TAATCCCATCTCCATTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28498044 17 + 49145316 TAATCCCATCTCCATTT i calJac3.chr22 I 318 C 0 s saiBol1.JH378197 5340800 15 + 8899380 --ttcttttcttttttt i saiBol1.JH378197 C 0 I 1790 s otoGar3.GL873654 133544 16 - 5549422 CTCTTCCCTCTC-ATTT i otoGar3.GL873654 C 0 I 1 s dasNov3.JH563638 378427 17 - 643850 TATATCCCTCTGCACTT i dasNov3.JH563638 C 0 I 2 e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 118119468 71582 + 122678785 T e aotNan1.NW_018505377v1 303475 989 - 4471408 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I a score=950946.000000 s hg38.chr19_GL383574v1_alt 16713 119 + 155864 CAGGCAAGATTtgaagtccccctcataccatagacaaaaattggctcaaaata-------------------aatcaaagacctaaatgtaagagctaac---ac-ataaaa----cttagaagcaaacattatgggtaaatattt s panTro5.chr19 36075540 119 + 61309027 CAGGCAAGATTtgaagtccccctcataccatagacaaaaattggctcaaaata-------------------aatcaaagacctaaatgtaagagctaac---ac-ataaaa----cttagaagcaaacattatgggtaaatattt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39827518 119 + 64411610 CAGGCAAGATTtgaagtccccctcataccatagacaaaaattggctcaaaata-------------------aatcaaagacctaaatgtaagagctaac---ac-ataaaa----cttaaaggcaaacattatgggtaaatattt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6245268 118 - 8369475 CAGGCAAGATttgaag-ccccctcataccatagacaaaaattggctcaaaata-------------------aatcaaagacctaaatgtaagagctaat---ac-ataaaa----cttagaagcaaacattatgggtaaatattt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63840308 119 - 106955855 CAGGCAAGATttgaagtcctcctcataccatagacaaaaattggctcaaaata-------------------aatcaaagacctaaatgtaagagttaac---ac-ataaaa----cttagaagcaaacattatgggtaaatatct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30148196 119 + 53671032 CAGGCAAGATTCGAAGTCCCcctcataccatagacaaaaattggctcaggata-------------------aatcaaagacctaaatgtaagagttaac---ac-ataaaa----cttagaagcaaacattgtgggtaaatattt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34601059 119 + 59248254 CAGGCAAGATTCGAAGTCCCcctcataccatagacaaaaattggctcaggata-------------------aatcaaagacctaaatgtaagagttaac---ac-ataaaa----cttagaagcaaacattgtgggtaaatattt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4469446 119 - 13342542 CAGGCAAGATTCGAAGTCCCcctcataccatagacaaaaattggctcaggata-------------------aatcaaagacctaaatgtaagagttaac---ac-ataaaa----cttagaagcaaacattgtgggtaaatattt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5399950 119 + 7714307 CAGGCAAGATTCGAAGTCCCcctcataccacagacaaaaattggctcaggata-------------------aatcaaagacctaaatgtaagagttaac---ac-ataaaa----cttagaagcaaacattgtgggtaaatattt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29207787 119 + 50890351 CAGGCAAGATTTGAAGTCCCcctcataccatagacaaaaattggctcaggata-------------------aatcaaagacctaaatgtaagagttaac---ac-ataaaa----cttagaagcaaacattgtgggtaaatattt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 821221 119 - 2385121 CAGGCAAGATTCGAAGTCCCcctcataccatagacaaaaattggctcaggata-------------------aatcaaagacctaaatataagagttaac---ac-ataaaa----cttagaagcaaacattgtgggtaaatattt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2266681 119 + 4274983 CAGGCAAGATTCGAAGTCCCcctcataccatagacaaaaattggctcaggata-------------------aatcaaagacctaaatgtaagagttaac---ac-ataaaa----cttagaagcaaacattgtgggtaaatattt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28498061 118 + 49145316 CAGCCAAAATTCAAAGTCCGccttattccatagacaaaaattggctcaaaata-------------------aatcaaagacctaaatgtaagagctaac---ac-ataaag----cttagaagaaaacattgggggtaaatat-t i calJac3.chr22 C 0 C 0 s otoGar3.GL873654 133561 121 - 5549422 CAGACAAGATTCAAAGTCACcttcatatgatggacaaaaattagctcaaaata-------------------ggccaaaggcctaaatagcagagcttacactac-aaaaat----cttagaagaaaacatt-tgggtaaattttt i otoGar3.GL873654 I 1 n 1 s dasNov3.JH563638 378446 140 - 643850 TATGCAAGATTCAAAAt--atctcacaccatagacaaaaattaactcaaaggatcaaataccaaaattaaaggatcaaagacctaaatgtaagacctaaa---actataaaataatcttagaagaaaacatag-gagtaaatcttt i dasNov3.JH563638 I 2 C 0 e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 118119468 71582 + 122678785 T e aotNan1.NW_018505377v1 303475 989 - 4471408 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e saiBol1.JH378197 5340815 1790 + 8899380 I a score=1208388.000000 s hg38.chr19_GL383574v1_alt 16832 175 + 155864 gt-atcctggattaggcaatgctttattgca--------tatgacaccaaaagtgcaaacaac--aacaacaacaaaaatgaataaactggactttataaaaattaaaaacttttgtgcttcaaaggacactatcaagaaagtgaaaagacaaccaatccgctgaataag-agagactatttacaaa s panTro5.chr19 36075659 175 + 61309027 gt-atcctggattaggcaatgctttattgca--------tatgacaccaaaagagcaaacaac--aacaacaacaaaaatgaataaactggactttataaaaattaaaaacttttgtgcttcaaaggacactatcaagaaagtgaaaagacaaccaatccactgaataag-agagactatttacaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39827637 175 + 64411610 gt-atcctggattaggcaatgctttattgca--------tatgacaccaaaagagcaaacaac--aacaacaacaaaaatgaataaactggactttataaaaattaaaaacttttgtgcttcaaaggacactatcaagaaagtgaaaagacaaccaatccactgaataag-agagactatttacaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6245386 175 - 8369475 gt-atcctggattaggcaatgctttattgca--------tatgacaccaaaagtgcaaacaac--aacaacaataaaaatgaataaactggacttcataaaaattaaaaacttttgtgcttcaaaggacactatcaagaaagtgaaaagacaactaatcccctgaataag-agagactatttacaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63840427 172 - 106955855 gt-atcctggattaggcaatgctttattgca--------tatgacaccaaaagtgcaaacaac--aacaac---aaaaatgaataaactggactttataaaaattaaaaacttttgtgcttcaaaggacactatcaagaaagtgaaaagacaaccaacccactgaatgag-agagactatttacaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30148315 181 + 53671032 gt-atcctggattaggcaatgctttattgcaccaaaagttgttgcaccaaaagtgcaaacaac--aacaac---aaaaatgaataaactggactttataaaaattaaaaacttttgtgcttcaaaggacactatcaagaaagtgaaaagacaaccaacccactgaatgagaagagactatttgcaga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34601178 181 + 59248254 gt-atcctggattaggcaatgctttattgcaccaaaagttgttgcaccaaaagtgcaaacaac--aacaac---aaaaatgaataaactggactttataaaaattaaaaacttttgtgcttcaaaggacactatcaagaaagtgaaaagacaaccaacccactgaatgagaagagactatttgcaga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4469565 181 - 13342542 gt-atcctggattaggcaatgctttattgcaccaaaagttgttgcaccaaaagtgcaaacaac--aacaac---aaaaattaataaactggactttataaaaattaaaaacttttgtgcttcaaaggacactatcaagaaagtgaaaagacaaccaacccactgaatgagaagagactatttgcaga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5400069 181 + 7714307 gt-atcctggattaggcaatgctttattgcaccaaaagttgttgcaccaaaagtgcaaacaac--aacaac---aaaaatgaataaactggacattataaaaattaaaaacttttgtgcttcaaaggacactatcaagaaagtgaaaagacaaccaacccactgaatgagaagagactatttgcaga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29207906 180 + 50890351 gt-atcctggattaggcaatgctttattgcaccaaaagttgttgcaccaaaagtgcaaacaac--aacaac---aaaaatgaataaactggactttataaaaattaaaaacttttgtgcttcaaaggacactatcaagaaagtgaaaagacaaccagcccactgaatgag-agatactatttgcaga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 821340 181 - 2385121 gt-atcctggattaggcaatgctttattgcaccaaaagttgttgcaccaaaagtgcaaacaac--aacaaa---caaaatgaataaactggacattataaaaattaaaaacttttgtgcttcaaaggacactatcaagaaagtgaaaagacaaccaacccactgaatgagaagagactatttgcaga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2266800 180 + 4274983 gt-atcctggattaggcaatgctttattgcaccaaaagttgttgcaccaaaagtgcaaacaac--aacaac---aaaaatgaataaactggactttataaaaattaaaaacttttgtgcttcaaatgacactatcaagaaagtgaaaagacaaccaacccactgaatgag-agagactatttgcaga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28498179 170 + 49145316 gt-atcctagattaggcaatgctttattgga--------tatgacaccaaaagttcaaacaac--aacca----aaaaatggataaactggactttataaaaattaaaaacttttgtgcttcaaaggacaccatcaagaaagtgaaaa-acaaccaactcaccgaatgag-agagacaacttgaaaa i calJac3.chr22 C 0 I 509 s dasNov3.JH563638 378586 171 - 643850 gtgactttggattaagcagtgttttctcaga--------taggacaccaaaatcacaaacagccaaagaaa---gaaaatagataaactgaacttaatcaaaattaaaaacctttgtgcttcaaaggacactaactggaaagcaaaaatacaac----tcatagaattag-aaatagtatttgcaaa i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 133682 1 - 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 118119468 71582 + 122678785 T e aotNan1.NW_018505377v1 303475 989 - 4471408 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e saiBol1.JH378197 5340815 1790 + 8899380 I a score=588853.000000 s hg38.chr19_GL383574v1_alt 17007 91 + 155864 ttatagatctgattagggacttgtatctagaatatataaaagaactcttgccactcaacaataaaaagaaaaattgcccaatttaaaagtg s panTro5.chr19 36075834 91 + 61309027 ttatagatctgattagggacttgtatctagaatatataaaagaactcttgccactcaacaataaaaagaaaaattgcccaatttaaaagtg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39827812 91 + 64411610 ttatagatctgattagggacttgtatctagaatatataaaagaactcttgccactcaacaataaaaagaaaaattgcccaatttaaaagtg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6245561 91 - 8369475 ttatagatctgattagggacttgtatctagaatatataaaagaactctttccactcaacaataaaaagaaaaattgcccaatttaaaagtg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63840599 91 - 106955855 ttatagatctgactagggacttgtatctagaatatataaaagaactctttccactcaacgacaaaaagaaaaattgcccaatttaaaagtg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30148496 91 + 53671032 ttgtagatctgattagagatttgtatctagaatatataaaagaactctttccactcaacaatgaaaaggaaaattgcccaatttaaaagtg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34601359 91 + 59248254 ttgtagatctgattagagatttgtatctagaatatataaaagaactctttccactcaacaatgaaaaggaaaattgcccaatttaaaagtg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4469746 91 - 13342542 ttgtagatctgattagagatttgtatctagaatatataaaagaactctttccactcaacaatgaaaaggaaaattgcccaatttaaaagtg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5400250 91 + 7714307 ttgtagatctgattagagatttgtatctagaatatataaaagaactctttccactcaacaataaaaaggaaaattgcccaatttaaaagtg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29208086 91 + 50890351 ttgtagatctgattagagatttgtatctagaatatataaaagaactctttccactcaacaataaaaaggaaaattgcccaatttaaaagtg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 821521 91 - 2385121 ttgtagatctgattagagatttgtatctagaatatataaaagaactctttccactcaacaataaaaaggaaaattgcccaatttaaaagtg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2266980 91 + 4274983 ttgtagatctgattagagatttgtatctagaatatataaaagaactctttccactcagcaataaaaaggaaaattgcccaatttaaaagtg i colAng1.NW_012111697v1 C 0 C 0 s dasNov3.JH563638 378757 90 - 643850 taatagatctgataagagacttctatccataatatat-aaagaacacttacaactcaacaatgaaaagataaatagcctgattaaaaaatg i dasNov3.JH563638 C 0 n 0 e otoGar3.GL873654 133682 1 - 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 118119468 71582 + 122678785 T e aotNan1.NW_018505377v1 303475 989 - 4471408 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e saiBol1.JH378197 5340815 1790 + 8899380 I e calJac3.chr22 28498349 509 + 49145316 I a score=896990.000000 s hg38.chr19_GL383574v1_alt 17098 169 + 155864 TTTAgctgggtgtggggctcaacgcctgtaattccagcactctgggaagccaaggcgagaggatcacttgagtccaggcatttgagaccaacctgggcaacatggcaaggccctgtctctacaaaaaaa-tacaaaaattatctgggcatggtggtttgcacctgtggtc s panTro5.chr19 36075925 170 + 61309027 TTTAgctgggtgtggggctcaacgcctgtaattccagcactctgggaagccaaggcgagaggatcacttgagtccaggcatttgagaccaacctgggcaacatggcaaggccctgtctctacaaaaaaaatacaaaaattacctgggcatggtggtgtgcacctgtggtc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39827903 169 + 64411610 TTTAgctgggtgtggggctcaacgcctgtaattccagcactctgggaagcgaaggcgagaggatcacttgagtccaggcatttgagaccaacctgggcaacatggcaaggccctgtctctacaaaaaaa-tacaaaaattacctgggcatggtggtgtgcacctgtggtc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6245652 169 - 8369475 TTTAgctgggtgtggggctcaacgcctgtaattccagcactctgggaagtcaaggcgagaggatcacttgagtccaggcatttgagaccaacctgggcaacatggcaaggccctgtctctacaaaaaaa-tacaaaaattatctgggcatggtggtgtgcacctgtggtc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63840690 168 - 106955855 TTTAGCTGTGTGTGGggctc-acgcctgtaattccagcactctgggaagccaaggcgagaggatcacttgagtccaggcgtttgagaccaacctgggcaacatggcaaggccctgtctctacaaaaaaa-tacaaaaattatctgggcatggtggtgtgcacctgtggtc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30148587 158 + 53671032 gTTggctgggtgtggggctc-acacctgtaattccagcactccgggaagccaaggcgagaggctcacttgagttcaggcatttaagaccaacctgggcaacatggcaaggccctgtctctacaaaaaaa-tacaaaaattatctgggcgt----------acctgtgctc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34601450 158 + 59248254 gTTggctgggtgtggggctc-acacctgtaattccagcactccgggaagccaaggcgagaggctcacttgagttcaggcatttaagaccaacctgggcaacatggcaaggccctgtctctacaaaaaaa-tacaaaaattatctgggcgt----------acctgtgctc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4469837 158 - 13342542 gTTggctgggtgtggggctc-acacctgtaattccagcactccgggaagccaaggcgagaggctcacttgagttcaggcatttaagaccaacctgggcaacatggcaaggccctgtctctacaaaaaaa-tacaaaaattatctgggcgt----------acctgtgctc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5400341 158 + 7714307 gTTggctgggtgtggggctc-acgcctgtaattccagcactccgggaagccaaggcaagaggctcacttgagtccaggcatttaagaccaacctgggcaacatggcaaggccctgtctctacaaaaaaa-tacaaaaattatctgggcgt----------acctgtgctc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29208177 158 + 50890351 gtcgactgggtgtggggctc-acgcctgtaattccagcactccgggaagccaaggcgagaggctcacttgagtccaggcatttgagaccaacctgggcaacatggcaaggccctgtctctacaaaaaaa-tacaaaaattatctgggcgt----------acctgtggtc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 821612 158 - 2385121 gTTggctgggtgtggggctc-acgcctgtaattccagcactccgggaagccaagacgagaggctcacttgagtccaggcatttaagaccaacctgggcaacatggcaaggccctgtctctacaaaaaaa-tacaaaaattatctgggcgt----------acctgtgctc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2267071 158 + 4274983 gTTggctggttgtggggctc-acgcctgtaattccagcactctgggaagccaaggcgagaggatcacttgagtccaggcatttgagaccaacctgggcaacatggcaaggccctgtctctacaaaaaaa-tacaaaagttatctgggcat----------acctgtggtc i colAng1.NW_012111697v1 C 0 C 0 e dasNov3.JH563638 378847 0 - 643850 I e otoGar3.GL873654 133682 1 - 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 118119468 71582 + 122678785 T e aotNan1.NW_018505377v1 303475 989 - 4471408 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e saiBol1.JH378197 5340815 1790 + 8899380 I e calJac3.chr22 28498349 509 + 49145316 I a score=1406985.000000 s hg38.chr19_GL383574v1_alt 17267 231 + 155864 ccagctacctgggaggctgaggtggaggattgcttgagcccag--gaaggttgcagtgagccatgatagggccactgcattccagcctggatgacag-agtggcaccctgtctcaaaaaGATACACAAA--------------------------------------------------------------------------------------------------Tggcggggtgcggtggctcacgcctgtaatcccaccactttgggaggccaaggagggcggatcacctgaggtcgggagtttgagaccagcctgaccaacatggag s panTro5.chr19 36076095 231 + 61309027 ccagctacctgggaggctgaggtggaggattgcttgagcccag--gaaggttgcagtgagccatgatagggccactgcattccggcctgggtgacag-agtggcaccctgtctcaaaaaGATACACAAA--------------------------------------------------------------------------------------------------Tggcggggtgcggtggctcacgcctgtaatcccaccactttgggaggccaaggagggcggatcacctgaggtcgggagtttgagaccagcctgaccaacatggag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39828072 231 + 64411610 ccagctacctgggaggctgaggtggaggattgcttgagcccag--gaaggttgcagtgagccatgatagggccactgcattccggcctgggtgacag-agtggcaccctgtctcaaaaaGATACACAAA--------------------------------------------------------------------------------------------------Tggcggggtgcggtggctcacgcctgtaatcccaccactttgggaggccaaggagggcggatcacctgaggtcgggagtttgagaccagcctgaccaacatggag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6245821 228 - 8369475 ccagctacctgggaggct--ggtggaggattgcttgagcccag--gaaggttgcagcgagccatgatagggccactgcattccggcctgggtgacgg-agtggcaccctgtctcaaaaaGATACACAAA--------------------------------------------------------------------------------------------------Tggcggggcacggtggttcacacctgtaatcccaccactttggggggccaagga-ggtggatcacctgaggtcgggagtttgagaccagcctgaccaacatggag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63840858 228 - 106955855 ccagctacctgggaggctgaggcggaggattgcttgaacccag--gaaggctgcagtgagccatgacagggccactacattccggcctgggtgacag-agcggcaccctgccttgaaaaGATACACAAA--------------------------------------------------------------------------------------------------Tggccgggcgcggtggctcaggcctgtaatcccatcactttgggaggccaagacgggcggatcacctgaggtcaggagtttgagaccagcctgaccaacatg--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30148745 231 + 53671032 ccagctacctgggaggctgaggtgaaggattgcttgagcccag--gaagactgcagtgagccatgatagggccactgcactccggcctggttgacag-agtgacaccctgtctcaaaaaGACAGACAAA--------------------------------------------------------------------------------------------------Tggccgggtgcggtggctcatgcctgtaatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacatggag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34601608 231 + 59248254 ccagctacctgggaggctgaggtgaaggattgcttgagcccag--gaagactgcagtgagccatgatagggccactgcactccggcctggttgacag-agtgacaccctgtctcaaaaaGACAGACAAA--------------------------------------------------------------------------------------------------Tggccgggtgtggtggctcatgcctgtaatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacatggag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4469995 231 - 13342542 ccagctacctgggaggctgaggtgaaggattgcttgagcccag--gaagactgcagtgagccatgatagggccactgcactctggcctggttgacag-agtgacaccctgtctcaaaaaGACAGACAAA--------------------------------------------------------------------------------------------------Tggccgggtgcggtggctcatgcctgtaatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacatggag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5400499 231 + 7714307 ccagctacctgggaggctgaggtgaaggattgcttgagcccag--gaagactgcagtgagccatgatagggccactgcactccggcctggttgacag-agtgacatcctgtctcaaaaaGACAGACAAA--------------------------------------------------------------------------------------------------Tggctgggtgcggtggctcatgcctgtaatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacatggag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29208335 231 + 50890351 ccagctacctgggaggctgaggtgaaggattgcttgagcccag--gaaggctgcagtgagccatgatagggccactgcactccggcctggttgacag-agtgacaccctgtttcaaaaagacagacaaa--------------------------------------------------------------------------------------------------cggccagacgcggtggctcatgcctgtaatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacatggag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 821770 231 - 2385121 ccagctacctgggaggctgaggtgaaggattgcttgagcccag--gaagactgcagtgagccatgatagggccactgcactccagcctggttgacag-agtgacactctgtctcaaaaaGACAGACAAA--------------------------------------------------------------------------------------------------TggccaggtgcggtggctcatgcctgtaatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacatggAG i manLeu1.NW_012102454v1 C 0 I 390 s colAng1.NW_012111697v1 2267229 231 + 4274983 ccagctacctgggatgctgaggtgaaggattgcttgagcccag--gaaggctgcagtgagccacgatagggccactgcactctggcctggttgacag-agtgacatcctgtctcaaaaaGACAGACAAA--------------------------------------------------------------------------------------------------Tggccgggcacggtggctcatgcctgtaatcccagcactttgagaggccaaggcgggcagatcacctgaggtcaggagtttgagaccagcctgatcaacatggag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28498858 329 + 49145316 cccgctactcgggaggtggca--ggagaattgcttgaacccagaaggaggttgcggtgagccaagatcatgccattgcactccagtctgggtaacaacagcgaaactccatttcaaagaaaaagaaaaagaaaattatagatctgattagggacttgtatccagaacatataaaaggactctttcgactcaacaataaaaagacaaattgcccaatttaaaagtgggtagccgggtatgg-ggctcttgcccataattctagcactctgggaggtcaaggtgagaggatcacttgagtctgggagtttcagaccagcctgggcaacatggca i calJac3.chr22 I 509 C 0 e dasNov3.JH563638 378847 0 - 643850 I e otoGar3.GL873654 133682 1 - 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 118119468 71582 + 122678785 T e aotNan1.NW_018505377v1 303475 989 - 4471408 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e saiBol1.JH378197 5340815 1790 + 8899380 I a score=411863.000000 s hg38.chr19_GL383574v1_alt 17498 84 + 155864 aaacccccactctactaaaaa-tacaa-aattagccgggcttggtggtgcatgcctgtaatcccagctactagggaggctgaggct s panTro5.chr19 36076326 84 + 61309027 aaacccccactctactaaaaa-tacaa-aattagccgggcttggtggtgcatgcctgtaatcccagctactagggaggctgaggct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39828303 84 + 64411610 aaacccccactctactaaaaa-tacaa-aattagccaggcttggtggtgcatgcctgtaatcccagctactagggaggctgaggct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6246049 83 - 8369475 aaacccccactctattaaaaa--acaa-aattagccgggcttggtggtgcatgcctgtaatcccagctactagggaggctgaggca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63841086 77 - 106955855 -------ttttgtactaaaaa-tacaa-aattagccgggcttggtggtgcatgcctgtaatcccagctactagggaggctgaggca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30148976 84 + 53671032 aaactccgactctaccaaaaa-tacaa-aattagccagatgtggtgatgcatgcctgtaatcccagctactagggaggctgaggca i rheMac8.chr19 C 0 I 304 s macFas5.chr19 34601839 84 + 59248254 aaactccgactctaccaaaaa-tacaa-aattagccagatgtggtgatgcatgcctgtaatcccagctactagggaggctgaggca i macFas5.chr19 C 0 I 304 s macNem1.NW_012011689v1 4470226 84 - 13342542 aaactccgactctaccaaaaa-tacaa-aattagccagatgtggtgatgcatgcctgtaatcccagctactagggaggctgaggca i macNem1.NW_012011689v1 C 0 I 304 s cerAty1.NW_012005268v1 5400730 84 + 7714307 aaactccgactctactaaaaa-tacaa-aattagccagatgtggtgatgcatgcctgtaatcccagctaccagggaggctgaggca i cerAty1.NW_012005268v1 C 0 I 304 s chlSab2.chr6 29208566 83 + 50890351 aaactctgactctactaaaaa-tacaa-aattagccagatgtggtgatgcatgcctgtaatcccagctact-gggagactgaggca i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2267460 84 + 4274983 aaactccgactctactaaaaa-tacaa-aattagccagttgtggtgatgcatgcctgtaatcccagctactagggaggctgaggca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28499187 85 + 49145316 aaaccctgtctctacaaaaaaatacaagaattatctgggcatggtggtgtacacctgtggtcccagctacctgggaggctgaggt- i calJac3.chr22 C 0 C 0 e dasNov3.JH563638 378847 0 - 643850 I e otoGar3.GL873654 133682 1 - 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 118119468 71582 + 122678785 T e aotNan1.NW_018505377v1 303475 989 - 4471408 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e saiBol1.JH378197 5340815 1790 + 8899380 I e manLeu1.NW_012102454v1 822001 390 - 2385121 I a score=617573.000000 s hg38.chr19_GL383574v1_alt 17582 108 + 155864 ggagaatctcttgaacccgggaggcggaggttgcggtgagccaagatcacgccactgcactccagcctgagcaacaagagcgaaacaccgtctcaaacaaac-aaacaa- s panTro5.chr19 36076410 108 + 61309027 ggagaatctcttgaacccgggaggtggaggttgcggtgagccaagatcgcgccattgcactccagcctgagcaacaagagcgaaacaccgtctcaaacaaac-aaacaa- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39828387 108 + 64411610 ggagaatctcttgaacccgggaggcggaggttgcggtgagccaagatcgcgccattgcactccagcctgagcaacaagagcgaaacaccgtctcaaacaaac-aaacaa- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6246132 107 - 8369475 ggagaatctcttgaa-ccgggaggcagaggttgcggtgagccaagattgcgccattgcactccagcctgagcaacaaaaatgaaacaccgtctcaaacaaac-aaacaa- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63841163 104 - 106955855 ggagaatctcttgaacctgggaggcggaggctgaggtgagccaagatcgcaccattgcactccagcctgagcaacaagagtgaaacactgtct----caaac-aaacaa- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30149364 104 + 53671032 ggagaatctcttgaacccgggaggtggaggttgcggtgagccaagatcgcaccattgcactccagcctaagcaacaagagcaaaacaccatct----caaac-aaacaa- i rheMac8.chr19 I 304 C 0 s macFas5.chr19 34602227 104 + 59248254 ggagaatctcttgaacccgggaggtggaggttgcggtgagccaagatcgcaccattgcactccagcctaagcaacaagagcaaaacaccatct----caaac-aaacaa- i macFas5.chr19 I 304 C 0 s macNem1.NW_012011689v1 4470614 100 - 13342542 ggagaatctcttgaacccgggaggtggaggttgcggtgagccaagatcgcaccattgcactccagcctaagcaacaagagcaaaacaccatct--------c-aaacaa- i macNem1.NW_012011689v1 I 304 C 0 s cerAty1.NW_012005268v1 5401118 105 + 7714307 ggagaatctcttgaacccgggaggtggaggttgcggtgagccaagatcgcaccattgcactccagcctaagcaacaagagcaaaacaccatct----caaacaaaaaaa- i cerAty1.NW_012005268v1 I 304 C 0 s chlSab2.chr6 29208649 104 + 50890351 ggagaatctcttgaacccaggaggtggaggttgcggtgagccgaaatcgcaccattgcactccagcctaagcaacaagagcaaaacaccatct----caaac-aaataa- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 822391 104 - 2385121 ggagaatctcttgaacccgggaggtggaggttgcggtgagccaagatcgcaccattgcactccagcctaagcaacaagagcaaaacaccatct----caaac-aaacaa- i manLeu1.NW_012102454v1 I 390 C 0 s colAng1.NW_012111697v1 2267544 104 + 4274983 ggagaatctctggaacccaggaggtggaggttacagtgagccgagatcgcaccattgcactccagcctaagcaacaagagcaaaacaccatct----caaac-aaataa- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28499272 100 + 49145316 ggaggactgcttgagactagga-----aggctgcagcaagccatgatagggccactgcactctggcctgggtaacaagagcgaaactccgcct----caaaa-aaaaaaa i calJac3.chr22 C 0 C 0 e dasNov3.JH563638 378847 0 - 643850 I e otoGar3.GL873654 133682 1 - 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 118119468 71582 + 122678785 T e aotNan1.NW_018505377v1 303475 989 - 4471408 I e cebCap1.NW_016107633v1 1553874 882 - 2680843 I e saiBol1.JH378197 5340815 1790 + 8899380 I a score=2842759.000000 s hg38.chr19_GL383574v1_alt 17690 324 + 155864 aaaaagatagacaataataggtgttggtgaggctgtggagaaaattggagccctcatacaattgccagtggaaatgtaaaatagtgtagctgctttggaaaacagtttgacagttcctcaaaaagttaaactctgagttaccatatggctcaactacttcattcttaggaggattgaaaacacatgttcccacaaaaacttgttcatagagg-tactcatggatatttataatagcagaagtg-aaaacaacccaaatgttcatcaactgataaatggataaacaaaatatggtatgtccatacaaagggatattatttagccttg s panTro5.chr19 36076518 324 + 61309027 aaaaagatagacaataataggtgttggtgaggctgtggagaaaattggagccctcatacaattgccagtggaaatgtaaaatagtgtagctgctctggaaaacagtttgacagttcctcaaaaagttaaactctgagttaccatatggctgaactacttcattcttaggaggattgaaaacacatgttcccacaaaaacttgttcatagagg-tactcatggatatttataatagcagaagtg-aaaacaacccaaatgttcatcaactgataaatggataaacaaaatacagtatgttcatacaaagggatattatttagccttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39828495 324 + 64411610 aaaaagatagacaataataggtgttggtgaggctgtggagaaaattggagccctcatacaattgccagtggaaatgtaaaatagtgtagctgctctggaaaacagtttgacagttcctcaaaaagttaaactctgagttaccatatggctgaactacttcattcttaggacgattgaaaacacatgttcccacaaaaacttgttcatagagg-tactcatggatatttataatagcagaagtg-aaaacaacccaaatgttcatcaactgataaatggataaacaaaatacagtatgttcatacaaagggatattatttagccttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6246239 325 - 8369475 aaaaagatagacaataataggtgttggtgaggccgtggagaaaattggagccctcatacaattgccggtggaaatgtaaaatagtgtagctgctttggaaaacagtttgacagttcctcaaaaagttaaactctgagttaccatatggctcaactacttcattcttaggaggactgaaaacacatgttcccacaaaaacttgttcatagagg-tactcatggatatttataatagcagaagtgaaaaacaacccaaatgttcatcaacagataaatggataaacaaaatatggtatgtccatacaaagggatattatttagccttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63841267 322 - 106955855 aaaaagatagacaataataggtgttggtgaggctgtggagaaaattggagccctcatacaattgccggtggaaatgtaaaatagtgtagctgctttggaaaatagtttgacagttcctcaaaaagttaaactctaagttaccatatggctcaactacttcattcttaggaggattgaaaacac--gttcccataaaaacttgttcatagagg-tattcatggatatttataatagcagaaatg-aaaacaacccaaatgttcatcaactgataaatggataaacaaaatatggtatgtccatacaaagggatattatttagccttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30149468 324 + 53671032 aaaaagataaacaataacaggtgttggtgaggatgtggagaaaactggagccctcatacaattgccagtggaaaagtaaaacagtgtagctgctttggaaaatagtttgacagttcctcaagaagttaaactctaagttactatatggctcaatcacttcattcctaggaggattgaaaacacatgttcccacaacaactagttcatagagg-tattcatggatatttataatagcagaagtg-aaaacaacccaaatgttcatcaactgattaatggataaacaaaatatggtatgtccatacaaagggatattatttaaccatg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34602331 324 + 59248254 aaaaagataaacaataacaggtgttggtgaggatgtggagaaaactggagccctcatacaattgccagtggaaaagtaaaacagtgtagctgctttggaaaatagtttgacagttcctcaagaagttaaactctaagttactatatggctcaatcacttcattcctaggaggattgaaaacacatgttcccacaacaactagttcatagagg-tattcatggatatttataatagcagaagtg-aaaacaacccaaatgttcatcaactgattaatggataaacaaaatatggtatgtccatacaaagggatattatttaaccatg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4470714 324 - 13342542 aaaaagataaacaataacaggtgttggtgaggatgtggagaaaactggagccctcatacaattgccagtggaaaagtaaaacagtgtagctgctttggaaaatagtttgacagttcctcaagaagttaaactctaagttactatatggctcaatcacttcattcctagaaggattgaaaacacatgttcccacaacaactagttcatagagg-tattcatggatatttataatagcagaagtg-aaaacaacccaaatgttcatcaactgattaatggataaacaaaatatggtatgtccatacaaagggatattatttaaccatg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5401223 324 + 7714307 aaaaagataaacaataacaggtgttggtgaggatgtggagaaaactggagccctcatacaattgccagtggaaaagtaaaacagtgtagctgctttggaaaatagtttgacagttcctcaagaagttaaactctaagttactatatggctcaatcacttcattcctaggaggattgaaaacacatgttcccacaacaactagttcatagagg-tattcatggatatttataatagcagaagtg-aaaacaacccaaatgttcatcaactgattaatggataaacaaaatatggtatgtccatacaaagggatattatttaaccatg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29208753 324 + 50890351 aaaaagataagcaataacaggtgttggtgaggatgtggagaaaattggagccctcatacaattgccagtggaaaagtaaaacagtgtagctgctttggaaaatagtttgacagttcctcaagaagttaaactctaagttactatatggctcaactacttcattcctaggaggattgaaaacacatgttcccacaaaaacttgttcatagagg-tattcatggatatttacaatagcagaagtg-aaaacaacccaaatgttcatcaactgattaatggataaacaaaatacagtctgtccctacaaagggatattatttagccttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 822495 324 - 2385121 aaaaagataaacaataacaggtgttggtgaggatgtggagaaaactggagccctcatacaattgccagtggaaaagtaaaacagtgtagctgctttggaaaatagtttgacagttcctcaagaagttaaactctaagttactatatggctcaatcacttcattcctaggaggattgaaaacacatgttcccacaacaactagttcatagagg-tattcatggatatttataatagcagaagtg-aaaacaacccaaatgttcatcaactgattaatggataaacaaaatatggtatgtccatacaaagggatattatttaaccatg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2267648 324 + 4274983 aaaaagataaacaataacaggtgttggtgaggatgtggagaaaattggagccctcatacaattgccagtggaaaagtaaaacagtgtagctgctttggaaaatagtttgacagttcctcaagaagttaaactctaagttactatatggctcaactacttcattcctaggaggattgaaaacacatgttcccacaaaaacttgttcatagagg-tattcatggatatttataatggcagaagtg-aaaacaacccaaatgttcatcaactgattaatggataaacaaaatatggtatgtccatacaaagggatattatttagccttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28499372 315 + 49145316 -aaGagagagacaacaataggtgttggtgaggatgtggagaaaattggaaccctcatacaattgccagtggaaatgtaaaagagtgtagctgctttggaaaatagttcaacagttcctcaaaaagttaaacttcaagttaccatatggctcaaccacttcattcctaggagaactgataacacatgttcccacagaaacttgctcatagagg-tattcatggatatttatagtagcagaagtg-aaaacaacccaaatgttcatcaact--------gataaacaaaatatggtatgtccatacaaagggatattatttcgcctta i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1554756 316 - 2680843 aaaaagatagacaacaataggtgttggtgaggatgtggagaaaattggaaccctcatacaattgccagtggaaatgtaaaacagtgtagctgctttggaaaatagttccacagttcctcaaaaagttaaacttcaagttaccatatggttcaattacttcattcctaggagaactgataacacatgttcccacagaaactcgctcacagagg-tattcatggatatttatagcagcagaagtg-aaaacaacccaaatgttcatcaact--------gataaacaaaatacggtacgtccatacaaagggatattatttagccttg i cebCap1.NW_016107633v1 I 882 C 0 s aotNan1.NW_018505377v1 304464 317 - 4471408 aaaaagatagacaacaataggtgttggtgaggacgtggagaaaattggaaccctcatacaattgccagtggaaatgtaagatagcgtagctgctttggaaaacagttcaacagttcctcaaaaagttaaacttcaagttaccatatggctcaactacttcattcctaggagaactgataacacatgttcccacagaaacttgctcatagaggttattcatggatatttatagtagcagaagtg-aaaacaacccaaatgttcatcaatt--------gataaacaaaatatggtatgtccatacaaagggatattatttagtcttg i aotNan1.NW_018505377v1 I 989 C 0 e dasNov3.JH563638 378847 0 - 643850 I e otoGar3.GL873654 133682 1 - 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 118119468 71582 + 122678785 T e saiBol1.JH378197 5340815 1790 + 8899380 I a score=2589936.000000 s hg38.chr19_GL383574v1_alt 18014 286 + 155864 aaagaatTTccgggcacggtggctcacgcctgtaatcccagcactttgggaggccaaggcaggt-gaacacttgaggccaggagttc-----aagaccagcctggccaacatggtgaaa-cccatctctactaaaaatac-aaaaaatcagtcaggcgtggtggcatgcg---------------------------cctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacagaggagacagaggttgcagtgagc--cgagatggcaccattgcactccatcccgagtgacagagtgagactgtctc------ s panTro5.chr19 36076842 286 + 61309027 aaagaatTgccgggcacggtggctcacgcctgtaatcccagcactttgggaggccaaggcaggt-gatcacttgaggccaggagttc-----gagaccagcctggccaacatggtgaaa-cccatctctactaaaattac-aaaaaatcagtcaggcgtggtggcatgcg---------------------------cctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacagaggagacggaggttgcagtgagc--cgagatggcaccattgcactccatcccgagtgacagagtgagactgtctc------ i panTro5.chr19 C 0 C 0 s panPan2.chr19 39828819 286 + 64411610 aaagaattgccgggcacggtggctcacgcctgtaatcccagcactttgggaggccaaggcaggt-gatcacttgaggccaggagttc-----gagaccagcctggccaacatggtgaaa-cccatctctactaaaaatac-aaaaaatcagtcaggcgtggtggcatgcg---------------------------cctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacagaggagacggaggttgcagtgagc--cgagatggcaccattgcactccatcccgagtgacagagtcagactgtctc------ i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6246564 284 - 8369475 aaagaatTgccgggcacggtggctcacgcctgtaatcccagccctttgggaggccaaggcaggt-gatcacttgaggccaggagttc-----gagaccagcctggccaacatggtgaaa-cccatctctactaaaaatac-aaaaaatcagtcaggtgtggtggcatgc----------------------------cctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacagaggagacggaggttgcagtgagc--cgagatggcaccactgcactccatcccgagcgaca-agtgagactgtctc------ i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63841589 288 - 106955855 aaagaatTgccgggcacggtggctcacgcctgtaatcccagcactttgggaagccaaggcgggtggatcacttgaggccaggagttc-----gagaccagcctggccaatatggtgaaaccccatctctactaaaaatac-aaaaaattggtcaggcgtggtggtatgca---------------------------cctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaattcaggaggcggaggttgcagtgagc--caaaatggcaccactgcactccatcccgggtgacagagtaagactgtctc------ i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30149792 290 + 53671032 aaagaatTgccaagcacggtggttcacgcctgtaaacccagcactttggaaggccaaggcaggtggataactcgaggccaagagttt-----gagaccagcctggccaacatggtgaagccccatctctactaaaaatac-aaaaaattagtcaggcgtagtggcgtgca---------------------------cctgtaatcccagctactcgggaggctgaggcaggagaatggcatgaacccaggaggtggaggttgcagtgagcaaccagatggcaccactgcactctatcccaggtgaaagagtgagactgtctc------ i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34602655 290 + 59248254 aaagaatTgccaagcacggtggttcacgcctgtaaacccagcactttggaaggccaaggcaggtggataactcgaggccaagagttt-----gagaccagcctggccaacatggtgaagccccatctctactaaaaatac-aaaaaattagtcaggcgtagtggcgtgca---------------------------cctgtaatcccagctactcgggaggctgaggcaggagaatggcatgaacccaggaggtggaggttgcagtgagcaaccagatggcaccactgcactctatcccaggtgaaagagtgagactgtctc------ i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4471038 295 - 13342542 aaagaatTgccaagcacggtggttcacgcctggaaacccagcactttggaaggccaaggcaggtggataactcgaggccaagagtttgagacgagaccagcctggccaacatggtgaagccccatctctactaaaaatac-aaaaaattagtcaggcgtagtggcgtgca---------------------------cctgtaatcccagctactcgggaggctgaggcaggagaatggcatgaacccaggaggtggaggttgcagtgagcaaccagaaggcaccactgcactccatcccaggtgaaagagtgagactgtctc------ i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5401547 290 + 7714307 aaagaatTGCGAAgcacggtggttcacgcctgtaaacccagcactttggaaggccaaggcaggtggataactcgaggccaagagttt-----gagaccagcctggccaacatggtgaagccccatctctactaaaaatac-aaaaaattagtcaggcgtagtggcatgca---------------------------cctctaatcccagctactcgggaggctgaggcaggagaatggcatgaacccgggaggcggaggttgcagtgagcaaccagatggcaccactgcactccatcccaggtgaaagagtgagactgtctc------ i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29209077 290 + 50890351 aaagaatTgctgagcacggtggctcacgcctgtaaacccagcactttggaaggccaaggcaagtggataacttgaggccaggagttt-----gagaccagcctggccaacatggtgaagccccatctctactaaaaatac-aaaaaattagtcaggcgtggtggcgtgca---------------------------cctgtaatcccagctactcgggaggctgaggcaagagaatggcatgaacccacgaggcggaggttgcagtgagcaaccagatggtaccactgtactccatcccaggtgacagagtgagactgtctc------ i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 822819 290 - 2385121 aaagaatTgccaagcacggtggttcacgcctgtaaacccagcactttggaaggccaaggcaggtggataactcgaggccaagagttt-----gagaccagcctggccaacatggtgaagccccatctctactaaaaatac-aaaaaattagtcaggcgtagtggcgtgca---------------------------cctgtaatcccagctactcgggaggctgaggcaggagaatggcatgaacccaggaggcggaggttgcagtgagcaaccagatggcaccactgcactccatcccaggtgaaagagtgagactgtctc------ i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2267972 290 + 4274983 aaagaatTgccgagcacggtggcttatgcctgtaaacccagcactttggaaggccaaggcaggtggataacttgaggccaggagttt-----gagaccagcctggccaacatggtgaagccccatctctactaaaaatac-aaaaaattagtcaggcgtggtggcgtgca---------------------------cctgtaatcccagctcctcgggaggctgaggcaagagaatggcatgaacccagggggcagaggttgcagtgagcaaccagatggtaccactgcactccatcccaggtgacagagtgagactgtctc------ i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28499687 287 + 49145316 aaagaatTgccgggcatgatagctcttgcctgtaatcttagcactttggg-ggccaaggcgggtggatcacttgaggccaggagatt-----gagaccagcctggccaacattgcaaaaccccatctctactaaaactacaaaaaaa---attaggcgtggtgacatgca---------------------------cctgtaatcccagctactcaggaggctaaggcaggaaaatcgcttgaacccaggaggcagaggttgcagtaagc--caagatggaaccactgcactccagcccaagtgaca----gagaatgtctcaaaaaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5342605 312 + 8899380 aaagaaTTgctgggcatgatagctcttgcctgtaattttagcactatggg-ggccaaggtgggtggatcacttgaggccaggagatc-----gagaccagcctggccaacatggcaaaaccccatctctactaaaaatac-aaaaaa---attaggcgtggtgacacgcacttgtaatcccagcatggtggcgcgtgcctgtaatcccagctactcaggaggctgaggcaggaaaatcgcttgaacccaggaggcagaggttgcagtaagc--caagatggcaccactgcactccagcccaagtgaca----gagactgtctc-aaaaa i saiBol1.JH378197 I 1790 C 0 s cebCap1.NW_016107633v1 1555072 280 - 2680843 aaagaatTgcagggcgtgatagctcttgcctgtaatcttagcactttggg-ggccaaggtgggtggatcacttgaggccaggagatc-----gagaccagcctggccaacatggcaaaatcccatctctactaaaaatac-aaaaaa---attaggcgtggtgatatgca---------------------------cctgtaatcccagctactcgggaggctgaggcaggaaaatcgcttgaacccaggaggcagaggttgcagtatgc--caagatggcaccactgcactccagcccaagttacg----gagactgtctc------ i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 304781 280 - 4471408 aaagaatTgccgggcatgatagctcttgcctgtaatcttagcactttggg-ggccaaggtgggtggatcacttgaggccaggagatc-----aagaccagcctggccaacacggcaaaaccccatctctactaaaaatac-aaaaaa---attaggcgtggtgacacgca---------------------------cctgtaatcccagctactcgggaggctgaggcaggaaaatcgcttgaacccaggaggcagaggttgcagtaagc--caagatggcaccactgcactccagcccaagtgacg----gagactgtctc------ i aotNan1.NW_018505377v1 C 0 C 0 e dasNov3.JH563638 378847 0 - 643850 I e otoGar3.GL873654 133682 1 - 5549422 I e mm10.chr7 111047473 2781 - 145441459 I e canFam3.chr1 118119468 71582 + 122678785 T a score=39695.000000 s hg38.chr19_GL383574v1_alt 18300 3 + 155864 aaa s panTro5.chr19 36077128 3 + 61309027 aaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39829105 3 + 64411610 aaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6246848 3 - 8369475 aaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63841877 3 - 106955855 aaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30150082 3 + 53671032 aaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34602945 3 + 59248254 aaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4471333 3 - 13342542 aaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5401837 3 + 7714307 aaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29209367 3 + 50890351 aaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 823109 3 - 2385121 aaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2268262 3 + 4274983 aaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28499974 3 + 49145316 aaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5342917 3 + 8899380 aaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1555352 3 - 2680843 aaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 305061 3 - 4471408 aaa i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4559868 3 - 122678785 AAA i canFam3.chr1 I 1475 C 0 s dasNov3.JH563638 266329 3 + 643850 AAG i dasNov3.JH563638 I 11419 C 0 e otoGar3.GL873654 133682 1 - 5549422 I e mm10.chr7 111047473 2781 - 145441459 I a score=333972.000000 s hg38.chr19_GL383574v1_alt 18303 34 + 155864 aaaacaaaaacaaaTAA---TTCAACTTCCTCGCATG s panTro5.chr19 36077131 34 + 61309027 aaaacgaaaacaaaTAA---TTCAACTTCCTCGCAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39829108 34 + 64411610 aaaacgaaaacaaataa---ttcaacttcctcgcaag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6246851 34 - 8369475 aaaacaaaaacaaaTAA---TTCAACTTCCTCGCATG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63841880 34 - 106955855 aaaacaaaaacaaaTAA---TTCAACTTCCTCGCACG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30150085 34 + 53671032 aaaacaaaaacaaacaa---TTCAACTTCCTCGCACG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34602948 34 + 59248254 aaaacaaaaacaaacaa---TTCAACTTCCTCGCACG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4471336 34 - 13342542 aaaacaaaaacaaaCAA---TTCAACTTCCTTGCACG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5401840 33 + 7714307 aaaacaaaaacaaaCAA----TCAACTTCCTCGCACG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29209370 34 + 50890351 aaaacaaaaacaaagaa---TTCAACTTCCTCGCAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 823112 34 - 2385121 aaaacaaaaacaaacaa---TTCAACTTCCTCGCACA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2268265 34 + 4274983 aaaacaaaaacaaagaa---TTCAACTTCCTCGCACG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28499977 33 + 49145316 aaaaaaaaaacaaagaa---TTCACCTTCCTCATA-G i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5342920 33 + 8899380 aaaacaaaaacaaagaa---TTCAACTTCCTCTTA-G i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1555355 33 - 2680843 aaaacaaaaacaaagaa---TTCAACTTCCTCTTA-G i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 305064 33 - 4471408 aaaacaaaaacaaaGAT---TTCAGCTTCCTCATA-G i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5416853 33 + 5549422 AAAATAGGAATAAG-AA---TTCACCTCCCTGGCATG i otoGar3.GL873654 I 3475 C 0 s canFam3.chr1 4559871 37 - 122678785 AGAATGAGCATGAATAAAAGCTCAACTCCCTGGCAGG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 266332 33 + 643850 AGAACATGAATAAG-AT---TCCAACTCCTTGCCAGG i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111047473 2781 - 145441459 I a score=974706.000000 s hg38.chr19_GL383574v1_alt 18337 82 + 155864 GACCTTGTA-----------CTGAAACAGGGATTTCCAAACCTTTCTTT-GTAGCCACTGTGCACCA-GCCCCATCAGAGCTCT---GTCTCTCTCCT s panTro5.chr19 36077165 82 + 61309027 GACCTTGTA-----------CTGAAACAGGGATTTCCAAACCTTTCTTT-GTAGCCACTGTGCACCA-GCCCCATCAGAGCTCT---GTCTCTCTCCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39829142 82 + 64411610 gaccttgta-----------ctgaaacaggaaTTTCCAAACCTTTCTTT-GTAGCCACTGTGCACCA-GCCCCATCAGAGCTCT---GTCTCTCTCCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6246885 83 - 8369475 GACCTTGTA-----------CTGAAACAGGGATTTCCAAACCTTTCTTTGGTAGCCACTGTGCACCA-GCCCCATCAGAGTTCT---GTCTCTCTCCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63841914 82 - 106955855 GACCTTGTA-----------CTGAAACAGGGATTTCCAAACCTTTCTTT-GTAGCCACTGTGCACTA-GCCCCATCAGAGCTCT---GTCTCTCTCCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30150119 82 + 53671032 GACCTTGTA-----------CTGAAACAGGGATTTCCAAACCTTTCTTT-GTAGCCACTGTGCACCA-GCACCATCAGAGCTCT---GTCTCTCTCCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34602982 82 + 59248254 GACCTTGTA-----------CTGAAACAGGGATTTCCAAACCTTTCTTT-GTAGCCACTGTGCACCA-GCACCATCAGAGCTCT---GTCTCTCTCCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4471370 82 - 13342542 GACCTTGTA-----------CTGAAACAGGGATTTCCAAACCTTTCTTT-GTAGCCACTGTGCACCA-GCACCATCAGAGCTCT---GTCTCTCTCCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5401873 82 + 7714307 GACCTTGTA-----------CTGAAACAGGGATTTCCAAACCTTTCTTT-GTAGCCACTGTGCACCA-GCCCCATCAGAGCTCT---GTCTCTCTCCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29209404 82 + 50890351 GACCTTGTA-----------CTGAAACAGGGATTTCCAAACCTTTCTTT-GTAGCCACTGTGCACCA-GCCCCATCAGAACTCT---GTCTCTCTCCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 823146 82 - 2385121 GACCTTGTA-----------CTGAAACAGGGATTTCCAAACCTTTCTTT-ATAGCCACTGTGCACCA-GCCCCATCAGAGctct---ctctctctcct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2268299 82 + 4274983 GACCTTGTA-----------CTGAAACAGGGATTTCCAAACCTTTCTTT-GTAGCCACTGTGCACCA-GCCCCATCAGAGCTCT---GTCTCTCTCCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28500010 89 + 49145316 GACAGGTGATTTCCAAACCTTTGAAACAGGGATTTCCAAACCTTTCTTT-GTAGCCACTGTGCACCA-GCCCCATCAGAGC-------TCTCTCTCCT i calJac3.chr22 C 0 I 299 s saiBol1.JH378197 5342953 78 + 8899380 GACCTGGTA-----------CTGAAACAGGGATTTCCAAACCTTTCTTT-GTAGCCACTGTAGACCA-GCCCCATCAGAGC-------TCTCTCTCCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1555388 78 - 2680843 AACCTTGTA-----------CTGAAACAGGGATTCCCAAATCTTTCTTT-GTAGCCACTGTGCACCA-GCCCCATCAGAGC-------TCTCTCTCCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 305097 78 - 4471408 GACCTTGTA-----------CTAAAACAGGGATTTCCAAACCTTTCTTT-GTAGCCACTGTGCACCA-GCCCCATCAGAGC-------TCTCTCTCCT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5416886 71 + 5549422 GACCTTCTA-----------CTGAACCAGGGATTTCACAGCCCTTCCTG-GAAGCC-------ACCA-ATCCCATCACAAC-------TCTCTCTCCT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111050254 71 - 145441459 GACTGTATG-----------CTGAAGCAGGGACCCCC----------TT-GAAGCCACTGGGCACCA-GTCACAGCTCAGCTCA----TCAATCTTCT i mm10.chr7 I 2781 C 0 s canFam3.chr1 4559908 86 - 122678785 AAGCTGATA-----------CTGAAGAGGTTATTTCATAGCCTTCCTTT-GAAGGCATCGTGCACCAGGGCTCAACACAACCTCTAGACTTCTTTCCT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 266365 85 + 643850 GACCTTGCA-----------CTGAACTCAGTATGTCATAGGCTTTCTTT-GAAGTCACTGTGCATCA-GCTTCAACACAGCCTCCTACTCTTCCTCCT i dasNov3.JH563638 C 0 C 0 a score=158924.000000 s hg38.chr19_GL383574v1_alt 18419 14 + 155864 GTGTCCCTCTC-TTA-- s panTro5.chr19 36077247 14 + 61309027 GTGTCCCTCTC-TTA-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39829224 14 + 64411610 GTGTCCCTCTC-TTA-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6246968 14 - 8369475 GTGTCCCTCTC-TTA-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63841996 14 - 106955855 GTGTCCCTCTC-TTA-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30150201 14 + 53671032 GCGTCCCTCTC-TTA-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34603064 14 + 59248254 GCGTCCCTCTC-TTA-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4471452 14 - 13342542 GTGTCCCTCTC-TTA-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5401955 14 + 7714307 GTGTCCCTCTC-TTA-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29209486 14 + 50890351 GTGTCCCTCTC-TTA-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 823228 14 - 2385121 gtgtccctctc-tTA-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2268381 14 + 4274983 GTGTCCCTCTC-TTA-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28500398 14 + 49145316 GCATCCCTCTC-TTA-- i calJac3.chr22 I 299 C 0 s saiBol1.JH378197 5343031 14 + 8899380 GCGTCCCTCTC-TTA-- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1555466 14 - 2680843 GCGTCCCTCTC-TTA-- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 305175 15 - 4471408 GCATCCCTCTCTTTA-- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5416957 14 + 5549422 GCTTCCCCCCT-TTC-- i otoGar3.GL873654 C 0 I 2 s mm10.chr7 111050325 12 - 145441459 --CTCCTGCTT-TCC-- i mm10.chr7 C 0 I 2 s canFam3.chr1 4559994 14 - 122678785 GCCTCCCCCTC-TCG-- i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 266450 14 + 643850 --GCTTCTCTC-CTCAG i dasNov3.JH563638 C 0 C 0 a score=3715113.000000 s hg38.chr19_GL383574v1_alt 18433 274 + 155864 TGATGCCAGGCTTCTCGCCATTTGCTCACTCAGCTC----A--------CCG-TCCTGCCTGTGCTCTGCCTTCATCCT-GCTGttcattcatgcagcaaatattaactgagcagctgccctgagccacgtgctgttactaggcccct---gatgatac-ggcagcaaccaaaa--caacatcactatctcaaaatgtttacattctagtgaaggagacagatacatacaaataattaaacagacatacttgagagagatacatgctataaagaaaatacaagctgagttaagg s panTro5.chr19 36077261 274 + 61309027 TGATGCCAGGCTTCTCGCCATTTGCTCACTCAGCTC----A--------CCG-TCCTGCCTGTGCTCTGCCTTCATCCT-GCTGttcattcatgcagcaaatattaactgagcagctgccctgtgccaggtgctgttactaagcccct---gatgatac-ggcagcgaccaaaa--caacatcactatctcaaaatgtttacattctagtgaaggagacagatacatacaaataattaaacagacatacttgagagagatacatgctataaagaaaatacaagctgagttaagg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39829238 274 + 64411610 TGATGCCAGGCTTCTCGCCATTTGCTCACTCAGCTC----A--------CCG-TCCTGCCTGTGCTCTGCCTTCATCCT-GCTGttcattcatgcagcaaatattaactgagcagctgccctgtgccaggtgctgttactaagcccct---gatgatac-ggcagcgaccaaaa--caacatcactatctcaaaatgtttacattctagtgaaggagacagatacatacaaataattaaacagacatacttgagagagatacatgctataaagaaaatacaagctgagttaagg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6246982 274 - 8369475 TGATGCCAGGCCTCTCGCCATTTGCTCACTCAGCTC----A--------CCA-TCCTGCCTGTGCTCTGCCTTCATCCT-GCTGttcattcatgcagcaaatattaactgagcagctgccctgagccaggtgctgttactaggcccct---gatgatac-agcagcgaccaaaa--caacatcactatctcaaaatgtttacattctagtgaaggagacagatacatacaaataattaaacagacatacttgagagagatacatgctataaagaaaatacaagctgagttaagg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63842010 269 - 106955855 TGATGCCAAGCTTCTCGCCATTTGCTCACTCAGCTC----A--------CCA-TCCTGCCTGTGCTCTGCCTTCATCCT-GCTGttcattcatgcagcaaatattaactgagcagctaccctgagccaggtgctg-tactaggcccct---gatgatac-agcagtgaccaaaa--caacatccctatctcaaaatgtttacattctagtgaaggagacag----atacaaataattaaacagacatacttgagagagatacatgctataaagaaaatgcaagctgagttaagg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30150215 271 + 53671032 TGATGCCAGACTTCTCGCCATTTGCTCACTCAGCTCA-CTA--------CCA-TCCTGCCTGTGCTCTGCCTTCATCCT-GCTGttcattcatgcagcaaatattaactgagcagctgcccggagccaggtgctg-tactagg-ccct---gatgatac-agcagcgaccaaaa--caacatctctctctcaaaatgtttacattctagtgaagaagacagac----acaaataattaaacagacatacttgagagagatacatgctataaagaaaatgcaagctgagttaagg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34603078 271 + 59248254 TGATGCCAGACTTCTCGCCATTTGCTCACTCAGCTCA-CTA--------CCA-TCCTGCCTGTGCTCTGCCTTCATCCT-GCTGttcattcatgcagcaaatattaactgagcagctgcccggagccaggtgctg-tactagg-ccct---gatgatac-agcagcgaccaaaa--caacatctctctctcaaaatgtttacattctagtgaagaagacagac----acaaataattaaacagacatacttgagagagatacatgctataaagaaaatgcaagctgagttaagg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4471466 271 - 13342542 TGATGCCAGACTTCTCGCCATTTGCTCACTCAGCTCA-CTA--------CCA-TCCTGCCTGTGCTCTGCCTTCATCCT-GCTGttcattcatgcagcaaatattaactgagcagctgcccggagccaggtgctg-tactagg-ccct---gatgatac-agcagcgaccaaaa--caacatctctctctcaaaatgtttacattctagtgaagaagacagac----acaaataattaaacagacatacttgagagagatacatgctataaagaaaatgcaagctgagttaagg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5401969 271 + 7714307 TGATGCCAGACTTCTCGCCATTTGCTCACTCAGCTCA-CTA--------CCA-TCCTGCCTGTGCTCTGCCTTCATCCT-GCTGttcattcatgccgcaaatattaactgagcagctgccctgagccaggtgctg-tactagg-ccct---gatgatac-agcagtgaccaaaa--caacatctctctctcaaaatgtttacattctaatgaagaagacagac----acaaataattaaacagacatacttgagagagatacatgctataaagaaaatgcaagctgagttaagg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29209500 275 + 50890351 TGATGTCAGACTTCTCGCCATTTGCTCACTCAGCTCA-CCA--------CCA-TCCTGCCTGTGCTCTGCCTTCATCCT-GCTGttcattcatgcagcaaatattaactgagcagctgcccagagccaggtgctg-ttctagg-ccct---gatgatac-agcagtgaccaaaa--caacatctctctctcaaaatgtttacattctagtgaagaagacagacacatacaaataattaaacagacatacttgagagagatacatgctatgaagaaaatgcaagctgagttaagg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 823242 271 - 2385121 CGATGCCAGACTTCTCGCCATTTGCTCACTCAGCTCA-CTA--------CCA-TCCTGCCTGTGCTCTGCCTTCATCCT-GCTGttcattcatgcagcaaatattaactgagcagctgccctgagccaggtgctg-tactagg-ccct---gatgatac-agcagtgaccaaaa--caacatctctctctcaaaatgtttacattctagtgaagaagacagac----acaaataattaaacagacatacttgagagagatacatgctataaagaaaatgcaagctgagttaacg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2268395 272 + 4274983 TGATGCCAGACTTCTCGCCATTTGCTCACTCAGCTCA-CCA--------CCA-TCCTGCCTGTGCTCTGCCTTCATCCT-GCTGttcattcatgcagcaaatattaactgagcagctgccctgggccaggtgctg-tactagg-ccct---gatgatac-agcagtgaccaa-----aacatctctatctcaaaatgtttacattctagtgaagaagacagacacatacaaataattaaacagacatacttgagagagatacatgctataaagaaaatgcaagctgagttaagg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28500412 271 + 49145316 AGATGCCAGGCTTCTTGCCATTTGCTCTCTTAGCTCA-CCA--------CCA-TTCTGCCTGTGCTCTGCCTTCATCCT-GCTGtttatttgttcagcaaatattaactgagcagctgccctgagccaggtgctg-taccagg-ccct---gatgatac-agcagtgaccaaaa--caacatccctatctcaaaatgtttatgttctaatgaaagagacagacacatac----aaataagtaaacatacttgagagagatacatgctatgaagaaaatgcaaactgagttaagg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5343045 271 + 8899380 AGATGCGAGACGTCTTGCCATTTGGTCTCTCAGCTCA-CCA--------CCA-TTCTGCCTGTGCTCTACCTTCATCCT-GCTGtttattcattcagcaaatattaactgagtagctgcccttagccaggtactg-taccagg-ccct---gatgatac-agcagtgaccaaaa--catcatccctatctcaaaatgtttacattctaatgaaggagacagacacaaat----aagtaaacagatatacttgagagagatacacgctatgaagaaaatgcaagctgagttaaag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1555480 275 - 2680843 AGATGCCAGGCTTCTTGCCATTTGCTCTCTCAGCTCA-CCA--------CCA-TTCTGTCTGTGCTCTACCTTCATCCT-GCTGtttattcattcagcaaatattaactgagcagctaccctgagccaggtgctg-taccagg-ccct---gatgatac-agcagtgaccaaaa--caacatccctatctcaaaatgtttacattctaatgaaggagacagacacatacaaataagtaaacagacatacttgagagagatacatgctatgaagaaaatgcaagctgagttaagg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 305190 275 - 4471408 AGATGCCAGGCTTCTTGCCATTTGCTCTCTCAGCTCA-CCA--------CCA-TTCTGCCTGTGCTCTGCCTTCATCCT-GCTCtttattcattcagcaaatattaactgagcagctgccctgagccaggtgctg-tgccagg-ccct---gatgatac-agcagtgaccaaaa--caacatccctgtctcaaaatgtttacattctaatgaaggagacagacacatacaaataagtaaacagacatacttgagagagatacacgctatgaagaaaatgcaagctgagttaagg i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3916948 255 - 30143674 TGATGCCAGGCTTCTCGCCATTTGTT---------------------------CCCTGCCTGAGCTCTGGCTTCATCCA-GCTGttcattcatgcagcaaatatttactgagcagtttccttttccccggtgtta-cactagg-ccct---gatgatac-agcagtgaccaaaa--caatgtccctgactcaaaatatttacattctagtgaaggagacagac--acacaaataattaaatagacatatttgggagaggtaaatgctatgaagaaaaagcaagctaagtaagg- i micMur3.chr22 N 0 I 12 s otoGar3.GL873654 5416973 270 + 5549422 TGATACGAGGCTTCTCACCATTTGTC-ACTCAGTTTG-CCA--------CATGCCCTCCCTGCGCTTTGCTTCCATCTA-GCTGttcattcgcacagcaaatttctactgggcagtttccttgtaccaggagcta-cgctaca-ccct---aatgatac-agcagtgaccaaaa--caatatccctgcctcaaaatatttacattctagtgaaggagacagaca-acacaaataattaaatagatatgtctggga----taaatgctatgaaggaaaagcaatttgagtacagg i otoGar3.GL873654 I 2 I 294 s mm10.chr7 111050339 281 - 145441459 GAACACGCAGATAATCACCATGCATTGGCTCAGCGCA-CCAGACATCCTACT-TGCTGCCTGTGTTCGGCTCTTATCCCAGTTGttcactcttgcagcaaatgtctaccgagcagctgtcctgggccggttgcta-cacttgg-ccccaaggatgatgcaaacagtgtctaaaa-ccagaaacccttcctcaaaatatttgcattctagccaagaagggagacaaacacttatgactaaatagacaaatgcgatggggg--------gtagggagggagcaaggcaagaagagg i mm10.chr7 I 2 I 11 s canFam3.chr1 4560009 258 - 122678785 TGTTGCCACGCTTCTCATCATTTGTTCACTCAGCTCA-CCAG-------ACA-TCCTGTCTGCGCCCTGCCCTCATCTA-ACTGttcatccatacaacaa---tttactgagaagccaccctgtgccaggagcta-tcctagg-tcgg---gaccacac-agtggtgaccaaaa-----cattcttatctcaaaatgtttacattctagcaaaggagacagacacacgcaaata-----------atatcagggagagagaaatgctatgaagaaaacataagc-aagctaagg i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 266464 279 + 643850 TGATGCCAGGCTTCTCACCATTTGTTCACTCAGTTCATCTG--------ACA-TGCTGCCTGTGCTCTGCCTTCATCCA-ACTGttcattcatgcagcaaatatttactgaacagccaccccatgccaaatgctattatcagc-tcct---gagtacac-atcagtgaccaaaaaacaaagaccctgcctcaaaaagtttacattctaatgaaggagccagacacgcataaataattaacaaggcatgtcgggaaaagataaatgttgtgaaggtaaagcaagcagaataaacg i dasNov3.JH563638 C 0 C 0 a score=989131.000000 s hg38.chr19_GL383574v1_alt 18707 71 + 155864 agatg------------a-gtg---gtattattttaaacaaggctgtca----gggacgtcatctct--ggaggtgatgcttgagcagagact s panTro5.chr19 36077535 83 + 61309027 agatgtagagtgatgtga-gtg---gtattattttaaacaaggctgtca----gggacgtcatctct--ggaggtgatgcttcagcagagact i panTro5.chr19 C 0 C 0 s panPan2.chr19 39829512 83 + 64411610 agatgtagagtgatgtga-gtg---gtattattttaaacaaggctgtca----gggacgtcatctct--ggaggtgatgcttcagcagagact i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6247256 83 - 8369475 agatgtagagtgatgtga-gtg---gtattattttaaacaaggctgtca----gggacgtcatctct--ggaggtgatgcttgagcagagact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63842279 83 - 106955855 agatgtagagtgatgtga-gtg---gtattattttaaacaaggctgtca----gggacgtcatctct--ggaggtgatggttgagcagacact i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30150486 83 + 53671032 agatgtagagtgatgtga-gtg---gtattattttaaacaaggttgtca----gagacgtcatacct--ggaggtgatacttgagcagatact i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34603349 83 + 59248254 agatgtagagtgatgtga-gtg---gtattattttaaacaaggttgtca----gagacgtcatacct--ggaggtgatacttgagcagatact i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4471737 83 - 13342542 agatgtagagtgatgtga-gtg---gtattattttaaacaaggttgtca----gagacgtcatatct--ggaggtgatacttgagcagatact i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5402240 83 + 7714307 agatgtagagtgatgtga-gtg---gtattattttaaacaaggctgtca----gggacgtcatatct--ggaggtgatacttgagcagatact i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29209775 83 + 50890351 agatgtagagtgatgtga-gtg---gtattattttaaacaaggctgtca----gggacgtcatatct--ggaggtgatactcgagcagatgct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 823513 83 - 2385121 agatgtagagtgatgtga-gtg---gtattattttaaataaggttgtca----gggacgtcatatct--ggaggtgatacttgagcagatact i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2268667 83 + 4274983 agatgtagagtgatgtga-atg---gtattattttaaacaaggctgtca----gggacgtcatatct--ggaggtgatacttgagcagatact i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28500683 83 + 49145316 ggatgtagagtgatgtgg-gtg---gtattattttaaacaaggttgtca----gggacgtcatctct--ggaggtgatatttgagcagagatt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5343316 87 + 8899380 ggatgtagagtgatgtgg-gcg---gtattattttaaacaaggttgtcatctctggacgtcatctct--ggaggtgatatctgagcagagatt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1555755 83 - 2680843 gtatgtagagtgatgtgg-gtg---gtgctattttaaacaaggttgtag----gggacgtcatctct--ggaggtgatatttgagcagagGTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 305465 83 - 4471408 ggatatagagtgatgtgg-gtg---gtattattttaaacaaggttgtca----gggacgtcatctct--agaggtgatatttgagcagagatt i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3917215 71 - 30143674 ------------atgtgg-gtg---gcattatcttaaacagggcaatca----gggaagtcatctct--ggaggtgacatttgagcagagact i micMur3.chr22 I 12 C 0 s otoGar3.GL873654 5417537 71 + 5549422 ------------agccgg-atg---gtattatcttaaatggggcagtca----gggaagtcatctct--ggaggtgacatttgagcagagact i otoGar3.GL873654 I 294 C 0 s mm10.chr7 111050631 55 - 145441459 AGATCTAC---------T-GTA---GTTTTGT----------------A----AATACATCACCTCT--TAGGGCAGC-TTTGAGCAGAG--T i mm10.chr7 I 11 C 0 s canFam3.chr1 4560267 77 - 122678785 --gcatatggtggtgcag-gcaggtgtcctgttttaatccc--cagtaa----ggaaagtcatctct--ggaggtcacatttgag-----atc i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 266743 83 + 643850 --atgtaaagtgatattatggg---gtattattttaaa-acagtgctca----gggaagccatctctaaggagggggcatttgagcagagtct i dasNov3.JH563638 C 0 I 543 a score=286759.000000 s hg38.chr19_GL383574v1_alt 18778 23 + 155864 ggaataaagtgCTCAAGTACTGG s panTro5.chr19 36077618 23 + 61309027 ggaataaagtgCTCAAGTACTGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39829595 23 + 64411610 ggaataaagtgctcaagtactgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6247339 23 - 8369475 ggaataaagtgCTCAAGTACTGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63842362 23 - 106955855 ggaataaagtgCTCAAGTACTGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30150569 23 + 53671032 ggaataaagtgCTCAAGTACCGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34603432 23 + 59248254 ggaataaagtgCTCAAGTACCGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4471820 23 - 13342542 ggaataaagtgCTCAAGTACCGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5402323 23 + 7714307 ggaataaagtgCTCAAGTACCGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29209858 23 + 50890351 ggaataaagtgCTCAAGTACTGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 823596 23 - 2385121 ggaataaagtgCTCAAGTACCGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2268750 23 + 4274983 ggaataaagtgCTCAAGTACTGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28500766 23 + 49145316 ggaataaagtgTTCAAATACTAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5343403 23 + 8899380 ggaataaagtgTTCAAATACTGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1555838 23 - 2680843 GCAATAAAGTGTTCAAATACTGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 305548 23 - 4471408 ggaataaagtgTTCAAATACTGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3917286 23 - 30143674 ggagtgaagtgCTAAAGTTCTGG i micMur3.chr22 C 0 I 1147 s otoGar3.GL873654 5417608 23 + 5549422 agaatgaagtACTAAAGTTCTCa i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111050686 21 - 145441459 ATAATGAACTGTGGAAGCTGT-- i mm10.chr7 C 0 C 0 s canFam3.chr1 4560344 23 - 122678785 tgaatgaagagcgaaagttctgg i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 266826 543 + 643850 I a score=1219442.000000 s hg38.chr19_GL383574v1_alt 18801 120 + 155864 TTGAATTAGACGC---GACTGGAACAG-------------aacga--------------gaagctaaatcatgtatatccttagacaccaa-------agtctggttttctctctgtgtaacatgggatcagtag---------agtgagtagaggaaggacatga s panTro5.chr19 36077641 120 + 61309027 TCGAATTAGACGC---GACTGGAACAG-------------aacga--------------gaagctaaatcctgtatatccttagacaccaa-------agtctggttttctctctgtgtaacatgggatcagtag---------agtgagtagaggaaggacatga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39829618 120 + 64411610 tcgaattagacgc---gactggaacag-------------aacga--------------gaagctaaatcctgtatatccttagacaccaa-------agtctggttttctctctgtgtaacatgggatcagtag---------agtgagtagaggaaggacatga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6247362 120 - 8369475 TTAAATTagacgc---gactggaaaag-------------aacga--------------gaagctaaatcatgtatatccttagacaccaa-------agtctggttttctctctgtgtaacatgggatcaggag---------agtgagtagaggaaggacacga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63842385 120 - 106955855 CTGAATTAGACGT---GACTGGAACAG-------------aacac--------------gaagctaaatcatgtatatccttagacaccaa-------agtctgattttctctctgtgtagcatgggatcagtag---------agtgagtagaggaaggacatga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30150592 120 + 53671032 TTGAATTAGACGT---GACTGGAATAG-------------aacga--------------gaagctaattcatgtatatccttagaagccaa-------agtctggttttctctctgtgtaacatgggatcagtag---------agtgagtagaggaagaacatga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34603455 120 + 59248254 TTGAATTAGACGT---GACTGGAATAG-------------aacga--------------gaagctaattcatgtatatccttagaagccaa-------agtctggttttctctctgtgtaacatgggatcagtag---------agtgagtagaggaagaacatga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4471843 120 - 13342542 TTGAATTAGACGT---GACTGGAATAG-------------aacga--------------gaagctaattcatgtatatccttagaagccaa-------agtctggttttctctctgtgtaacatgggatcagtag---------aatgagtagaggaagaacatga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5402346 120 + 7714307 TTGAATTAGACGT---GACTGGAATAG-------------aacga--------------gaagctaattcatgtatatccttagaagccaa-------agtctggttttctctctgtgtaacatgggatcagtag---------agtgagtagaggaagaacatgc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29209881 120 + 50890351 TTGAATTAGACGT---GACTGGAATAG-------------aacga--------------gaagctaaatcatgtatatccttagaagccaa-------agtctggttttctctctgtgtaacatgggatcagcag---------agtgagtagaggaagaacatga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 823619 120 - 2385121 CTGAATTAGACGT---GACTGGAATAG-------------aacga--------------gaagctaattcatgtatatccttagaagccaa-------agtctggttttctctctgtgtaacatgggatcagtag---------agtgagtagaggaagaacatga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2268773 120 + 4274983 TTGAATTAGACAT---GACTGGAATAG-------------aacga--------------gaagctaaatcatgtatatccttagaagccaa-------agtctggttttctctctgtgtaacaggggatcagtag---------agagagtagaggaagaacatga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28500789 117 + 49145316 TTGAATTAGACGT---GACTGGAACAG-------------aacga--------------gaagcaaaatcatgcatgtcctttgaagc----------agtctggtttcctctctgtgtaacatgggatcagtag---------agtgagtagagaaaggacatga i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5343426 119 + 8899380 TTAAATTAGACGT---GACTGGAACAG-------------aacga--------------gaagcaaaatcatgcatgtcctttgaagc-aa-------agtctggtttgctctctgtgtaacacgggatcagtag---------agtgagtagaggaaggacatga i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1555861 122 - 2680843 TTGAATTAGACGTGACGACTGGAACAG-------------aacga--------------gaagcaaaatcatgcatgtcctttgaggc-aa-------agtctggtttgctctctgtgtaacataggatcagtag---------agtgagtagaggaaggacatga i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 305571 119 - 4471408 TTGAATTAGACGT---GACTGGAACAG-------------aacga--------------gaagcaaaatcatgcatgtcctttgaagc-aa-------agtctggtttgctctccgtataacatgggatcagtag---------agtgagtagaggaaggacatga i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5417631 147 + 5549422 gtgaagaaggagt---ggctgcaatag-------------aagggagaaggaaaataacaaagctaaatcatgtatgtccttataagccaaaggaaggagtctgatgttcactgtgtgacccacaggatcagtgggtggaaaatagtgggtag---aatgacatgg i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111050707 124 - 145441459 GAGAAGAAGGGAT---GCTTGGAACAGTATGGAGCTGTgtaacaa--------------caaattaaatcatccatgccctcataagccaaactaggaagtctggttttcaccttgtgtaaaatgtaacctgtgg---------agcgca---------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4560367 48 - 122678785 gtgaagaaagggt---ggctagaacag-------------aatgg---------------------------------------------------------------------------------------tga---------aatgaggtgacgaggg------ i canFam3.chr1 C 0 C 0 e micMur3.chr22 3917309 1147 - 30143674 I e dasNov3.JH563638 266826 543 + 643850 I a score=10920.000000 s hg38.chr19_GL383574v1_alt 18921 1 + 155864 t s panTro5.chr19 36077761 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39829738 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6247482 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63842505 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30150712 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34603575 1 + 59248254 t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4471963 1 - 13342542 t i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5402466 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29210001 1 + 50890351 t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 823739 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2268893 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28500906 1 + 49145316 t i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5343545 1 + 8899380 t i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 305690 1 - 4471408 t i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5417778 1 + 5549422 t i otoGar3.GL873654 C 0 C 0 e micMur3.chr22 3917309 1147 - 30143674 I e dasNov3.JH563638 266826 543 + 643850 I e mm10.chr7 111050831 0 - 145441459 C e canFam3.chr1 4560415 0 - 122678785 C e cebCap1.NW_016107633v1 1555983 0 - 2680843 C a score=122113.000000 s hg38.chr19_GL383574v1_alt 18922 35 + 155864 ctgagttaga-------------ttttttttttttttttt----------gagacgga s panTro5.chr19 36077762 44 + 61309027 ctgagttaga-------------ttttttttttttttttt-tttttttttgagacgga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39829739 35 + 64411610 ctgagttaga-------------ttttttttttttttttt----------gagacgga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6247483 45 - 8369475 ctgggttaga-------------tttttttttttttttttttttttttttgagacgga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63842506 36 - 106955855 ctgagttagt-------------ttttttttttttttttt---------tgagacgga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30150713 48 + 53671032 cagagttatatattttttcttttctttttttttttttttt----------gagacaga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34603576 48 + 59248254 cagagttatatattttttcttttctttttttttttttttt----------gagacaga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4471964 52 - 13342542 cagagttatatattttttcttttctttttttttttttttt------tttggagacaga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5402467 44 + 7714307 cagagttatatattt----ttttctttttttttttttttt----------gagacaga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29210002 35 + 50890351 cagagttaga-------------ttttttttttttttttt----------gagacgga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 823740 42 - 2385121 cagagttatatat------ttttttctttttttttttttt----------gagacaga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2268894 34 + 4274983 cagagttaga--------------ttttttttttcttttt----------gagacaaa i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5417779 34 + 5549422 ttgagttaga--------------ttcttttttttttttt----------gagacaga i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111050831 13 - 145441459 ---------------------------------------------ctgagtagacgga i mm10.chr7 C 0 I 52 s canFam3.chr1 4560415 22 - 122678785 ----gttaag-------------tcgtctatgtttttgt------------------- i canFam3.chr1 C 0 C 0 e micMur3.chr22 3917309 1147 - 30143674 I e dasNov3.JH563638 266826 543 + 643850 I e aotNan1.NW_018505377v1 305691 0 - 4471408 C e cebCap1.NW_016107633v1 1555983 0 - 2680843 C e saiBol1.JH378197 5343546 0 + 8899380 C e calJac3.chr22 28500907 0 + 49145316 C a score=115764.000000 s hg38.chr19_GL383574v1_alt 18957 20 + 155864 gtctcgctctgtcgcccagg s panTro5.chr19 36077806 20 + 61309027 gtctcgctctgtcgcccagg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39829774 20 + 64411610 gtctcgctctgtcgcccagg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6247528 20 - 8369475 gtctcgctctgtcgcccagg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63842542 20 - 106955855 gtctccctctgtcgtccagg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30150761 20 + 53671032 gtctcgttctgtagcccaga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34603624 20 + 59248254 gtctcgttctgtagcccaga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4472016 20 - 13342542 gtctccttctgtagcccaga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5402511 20 + 7714307 gtctcgttctgtagcccaga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29210037 20 + 50890351 gtctcgctctgtcgcccagg i chlSab2.chr6 C 0 I 293 s manLeu1.NW_012102454v1 823782 20 - 2385121 gtctcgttctgtagcccaga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2268928 20 + 4274983 gtctcactctgtcgcccaga i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5417813 20 + 5549422 gcctcacactgttgccctgg i otoGar3.GL873654 C 0 C 0 e micMur3.chr22 3917309 1147 - 30143674 I e dasNov3.JH563638 266826 543 + 643850 I e mm10.chr7 111050844 52 - 145441459 I e canFam3.chr1 4560437 0 - 122678785 C e aotNan1.NW_018505377v1 305691 0 - 4471408 C e cebCap1.NW_016107633v1 1555983 0 - 2680843 C e saiBol1.JH378197 5343546 0 + 8899380 C e calJac3.chr22 28500907 0 + 49145316 C a score=1495264.000000 s hg38.chr19_GL383574v1_alt 18977 252 + 155864 ctggagtgcagtggcacaatctcggctcaccacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgagactataggcgcgcgccaccacgcctggctaa-tttttttatatttttagtagagacggggtttcaccatgttggcca-ggctggtctcgaactcctgaccggtgatgcgcccgcctcgggcccccaaagtactg---ggagtacaggcgt-gagccactgcgcccagc s panTro5.chr19 36077826 252 + 61309027 ctggagtgcagtggcataatctcggctcaccacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgagactataggcgcgcgccaccacgcctggctaa-tttttttgtatttttagtagagacggggtttcaccatgttggcca-ggctggtctcgaactcctgaccggtgatgcgcccgcctcgggcccccaaagtactg---ggagtacaggcgt-gagccactgcgcccagc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39829794 252 + 64411610 ctggagtgcagtggcataatctcggctcaccacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgagactataggcgcgcgccaccacgcctggctaa-tttttttgtatttttagtagagacggggtttcaccatgttggcca-ggctggtctcgaactcctgaccggtgatgcgcccgcctcgggcccccaaagtactg---ggagtacaggcgt-gagccactgcgcccagc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6247548 252 - 8369475 ctggagtgcagtggcacaatctcggctcaccacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccaagtggctgagactataggcgcgcgccaccacgcctggctaa-tttttttgtatttttagtagagatggggtttcaccatgttggcca-ggctggtctcgaactcctgaccggtgatgcgcccgcctcgggcccccaaagtactg---ggagtacaggcgt-gagccactgcgcccagc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63842562 253 - 106955855 ctggagtgcagtggcacaatctcagctcaccacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgagactataggcgccggccaccgcgcccggctaattttttttgtatttttagtagagacgcggtttcaccatgtttgcca-ggctggtctcgaactcctgacctgtgatccgccggtctcaggctcccaaagtactg---ggagtacaggcgt-gagccactgcgcccggc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30150781 252 + 53671032 ctggagtgcagtggcacaatctcggctcaccacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggactataggtgcgcgccaccatgcccggctaa-tttttttgtatttttagtagagacggggtttcaccatgttggcca-ggctggtctccaactcctgacctgtgatccgcccgcctcgggcttccaaagtactg---ggattacaggcgt-gagccaccgcacccagc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34603644 252 + 59248254 ctggagtgcagtggcacaatctcggctcaccacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggactataggtgcgcgccaccatgcccggctaa-tttttttgtatttttagtagagacggggtttcaccatgttggcca-ggctggtctccaactcctgacctgtgatccgcccgcctcgggcttccaaagtactg---ggattacaggcgt-gagccaccgcacccagc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4472036 252 - 13342542 ctggagggcagtggcacaatctcggctcaccacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggactataggtgcgcgccaccatgcccggctaa-tttttttgtatttttagtagagacggggtttcaccatgttggcca-ggctggtctccaactcctgacctgtgatccgcccgcctcgggcttccaaagtactg---ggattacaggcgt-gagccaccgcgcccagc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5402531 252 + 7714307 ctggagtgcagtggcacaatctcggctcaccacaacctccgcctcctgggttcaagcaattttcctgcctcagcctcccaagtagctgggactataggtgcgcgccaccatgcccggctaa-tttttttgtatttttagtagagacggggtttcaccatgttggcca-ggctggtctccaactcctgacctgtgatccgcccgcctcgggcttccaaagtactg---ggattaccggcgt-gagccaccgcgcccagc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29210350 252 + 50890351 ctggagtgcagtggcacaatcccggctcaccacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggactataggcgcgcgccaccatgcccggctaa-tttttttgtatttttagtagagacggggtttcaccatgttggcca-ggctggtctccaactcctgacctgtgatccgcccgcctcgggcttccaaagtactg---ggattacaggcgt-gagccaccgcgcccagc i chlSab2.chr6 I 293 C 0 s manLeu1.NW_012102454v1 823802 252 - 2385121 ctggagtgcagtggcacaatctcggctcaccacaacctccgcctcctgggttcaagcagttctcctgcctcagcctcccaagtagctgggactataggtgcgcgccaccatgcccggctaa-tttttttgtatttttagtagagacggggtttcaccatgttggcca-ggctggtctccaactcctgacctgtgatccgcccgcctcgggcttccaaagtactg---ggattacaggcgt-gagccaccgcgcccagc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2268948 252 + 4274983 caggagtgcagtggcacaatctcggctcaccacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggactataggtgcgcgccaccatgcccggctaa-tttttttgtatttttagtagagacggggtttcaccatgttggcca-ggctggtctccaactcctgacctgtgatccgcccacctcgggcttccaaagtactg---ggattacaggcgt-gagccaccgcgcccagc i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5417833 229 + 5549422 gtagagggctgtggc---atcacaactcacaacaatctccaactcctgggctcaagcaattctcttgcctcagcctcccaagtagctgggactacaggcgcccaccacaacactgtgctat-tttcttattgcagttgtcattgattg---tttacc----tggccagggctggatgtgaacccgccagcactggtgcatgtggctagtgcgtt--agctgctt---gagcaacaggtgcagagc------------- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4560437 81 - 122678785 -------------------------------------------------------------------------------------------------------------aagcctaagtaa-------------------ggagtccggctttcactctg-tgacta-ga--gatc----actcgggagagg-------------------------agtactgagtagaagaaagacat-ga--------------- i canFam3.chr1 C 0 C 0 e micMur3.chr22 3917309 1147 - 30143674 I e dasNov3.JH563638 266826 543 + 643850 I e mm10.chr7 111050844 52 - 145441459 I e aotNan1.NW_018505377v1 305691 0 - 4471408 C e cebCap1.NW_016107633v1 1555983 0 - 2680843 C e saiBol1.JH378197 5343546 0 + 8899380 C e calJac3.chr22 28500907 0 + 49145316 C a score=4219.000000 s hg38.chr19_GL383574v1_alt 19229 1 + 155864 c s panTro5.chr19 36078078 1 + 61309027 c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39830046 1 + 64411610 c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6247800 1 - 8369475 c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63842815 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30151033 1 + 53671032 c i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34603896 1 + 59248254 c i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4472288 1 - 13342542 c i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5402783 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29210602 1 + 50890351 c i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 824054 1 - 2385121 c i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2269200 1 + 4274983 g i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1555983 1 - 2680843 c i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5418062 1 + 5549422 c i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4560518 1 - 122678785 t i canFam3.chr1 C 0 C 0 e micMur3.chr22 3917309 1147 - 30143674 I e dasNov3.JH563638 266826 543 + 643850 I e mm10.chr7 111050844 52 - 145441459 I e aotNan1.NW_018505377v1 305691 0 - 4471408 C e saiBol1.JH378197 5343546 0 + 8899380 C e calJac3.chr22 28500907 0 + 49145316 C a score=57986.000000 s hg38.chr19_GL383574v1_alt 19230 5 + 155864 ctgag s panTro5.chr19 36078079 5 + 61309027 ctgag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39830047 5 + 64411610 ctgag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6247801 5 - 8369475 ctgag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63842816 5 - 106955855 ctgag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30151034 5 + 53671032 ctgag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34603897 5 + 59248254 ctgag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4472289 5 - 13342542 ctgag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5402784 5 + 7714307 ctgag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29210603 5 + 50890351 ctgag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 824055 5 - 2385121 ctgag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2269201 5 + 4274983 ctgag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28500907 5 + 49145316 ctgag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5343546 5 + 8899380 ctgac i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1555984 5 - 2680843 ctgac i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 305691 5 - 4471408 ctgag i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5418063 5 + 5549422 ctgag i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4560519 4 - 122678785 ctga- i canFam3.chr1 C 0 C 0 e micMur3.chr22 3917309 1147 - 30143674 I e dasNov3.JH563638 266826 543 + 643850 I e mm10.chr7 111050844 52 - 145441459 I a score=207421.000000 s hg38.chr19_GL383574v1_alt 19235 16 + 155864 ttagattttaagaaga s panTro5.chr19 36078084 16 + 61309027 ttagattttaagaaga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39830052 16 + 64411610 ttagattttaagaaga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6247806 16 - 8369475 ttagattttaacaaga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63842821 16 - 106955855 ttagattttaacaaga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30151039 16 + 53671032 ttagattttaacaaga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34603902 16 + 59248254 ttagattttaacaaga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4472294 16 - 13342542 ttagattttaacaaga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5402789 16 + 7714307 ttagattttaacaaga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29210608 16 + 50890351 ttagattttaacaaga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 824060 16 - 2385121 tgagattttaacaaga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2269206 16 + 4274983 ttagattttaacaaga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28500912 16 + 49145316 ttcgattttaacaagt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5343551 16 + 8899380 ttagattttaacaagt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1555989 16 - 2680843 ttagattttaacaagt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 305696 16 - 4471408 ttagattttagcaagt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5418068 16 + 5549422 ttagatttcaacaaaa i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4560523 15 - 122678785 -cagattttagcagga i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 267369 16 + 643850 ttagattttaacaaga i dasNov3.JH563638 I 543 C 0 e micMur3.chr22 3917309 1147 - 30143674 I e mm10.chr7 111050844 52 - 145441459 I a score=4726863.000000 s hg38.chr19_GL383574v1_alt 19251 448 + 155864 tctctctggctgctgtattgagaataaagtactgggggcaagagttgacacagaggcaacttttagaaggctactgc-aataattc-----------ag-cccgagtaatcgtggcttgtgggagaagtgtagg-aatggagatgag-----------aagtcagatttagg-atatattgtgtatacataacgg---agaggtgtagtca-gaacagatgtggaag--caagac--agggcaaggctgact-cacggcttttagtctgagcagctgagtaaaaat----ggtac-cgtttacatcaaatagggaac--ggtgg-tgaaggagcagg-ttagaggg-gaaacagggag-cat-ggctttggacccttaacgtttg--ag------atTCGAC----------AG---------------------------AAACCCTGGTTCACG-GAATTGATCCAAGCTACATACTGATAATTGG-----------------GATTAGTGAGT-TACAATGGCGTTGCAAGCCATGAAACTGGTTCAGACCGGCTG s panTro5.chr19 36078100 450 + 61309027 tctctctggctgctgtattgagaataaagtactgggagcaagagttgacacagaggcaactttcagaaggctactgc-aataattc-----------ag-cccgagtaatcgtggcttgtgggagaagtgtagg-aatggagatgagg--------agaagtcagatttagg-atatattgtgtatacataacgg---agaggtgtagtca-gaacagatgtggaag--caagac--agggcaaggctgact-cacggcttttagtctgagcagctgagtaaaaat----ggtac-cgtttacatcaa-tcgggaac--ggtgg-tgaaggagcagg-ttagaggg-gaaacagggag-cat-ggctttggacccttaacgtttg--ag------atTCGAC----------AG---------------------------AAACCCTGGTTCACG-GAATTGATCCAAGCTACATACTGATAATTGG-----------------GATTAGTGAGT-TACAATGGCGTTGCAAGCCATGAAACTGGTTCAGACCGGCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39830068 450 + 64411610 tctctctggctgctgtattgagaataaagtactgggagcaagagttgacacagaggaaactttcagaaggctactgc-aataattc-----------ag-cccgagtaatcgtggcttgtgggagaagtgtagg-aatggagatgagg--------agaagtcagatttagg-atatattgtgtatacataacgg---agaggtgtagtca-gaacagatgtggaag--caagac--agggcaaggctgact-cacggcttttagtctgagcagctgagtaaaaat----ggtac-cgtttacatcaa-tcgggagc--ggtgg-tgaaggagcagg-ttagaggg-gaaacagggag-cat-ggctttggacccttaacgtttg--ag------atTCGAC----------AG---------------------------AAACCCTGgttcacg-gaattgatccaagctacatactgataattgg-----------------gattagtgagt-tacaatggcgttgcaagccatgaaactggttcagaccggctg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6247822 450 - 8369475 tctctctggctgctgtattgagaataaagtactgggggcaagagttgacacagaggcaacttttagaaggctactgc-aataattc-----------ag-cccgagtaatcgtggcttgtgggagaagtgtagg-aatggagatgagg--------agaagtcagatttagg-atatattgtgtatacataacgg---agaggtgtagtca-gaacagatgtggaag--caagac--agggcaaggctgact-cacggcttttagtctgagcagctgagtaaaaat----ggtac-cgtttacatcaa-tagggaac--ggtgg-tgaaggagcagg-ttagaggg-gaaacagggag-cat-ggctttggacccttaacgtttg--ag------atTCGAC----------AG---------------------------AAACCCTGGTTCACG-GAATTGATCCAAGCTACATACTGATAATTGG-----------------GATTTGTGAGT-TACAATGGCGTTGCAAGCCATGAAACTGGTTCAGACCGGCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63842837 446 - 106955855 tctctctggctgccgtattgagaataaagtattggaagcaagggttgacacagaggcaacttttagaaggctactgc----aattc-----------ag-cccgagtaatcgtggcttgtgggagaggtctagg-aatggagataag-----------aggtcagatttaggaatatattgtgtagacataacgg---agagctgtagtca-gaacagatgtggaag--caagacagagggcaaggctgact-caaggcttttagtctgagcagctgagtaaaaat----ggtac-cgtttacatcaa-cagggaac--ggtgg-tgaaggagcatt-ttagaggg-gaaacaggg-g-cat-ggctttggacccttaacgtttg--ag------atTCGAC----------AG---------------------------AAACCCTGGTCCACG-GAATTGATCCAAGCTACATACTGATAATTGG-----------------GATTGGTGAGT-TACAGTGGCGTTGCAAGCCATGAAGCTGGTTCAGGCCGGCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30151055 467 + 53671032 tctctctagctgctgtgttgagaataaagtactgggggcaagggttgacacagaggcaacttttagaaggctactgc-aataattc-----------ag-cccgagtaatcgtggtttgtgggagaggtgtagg-gatggagatgagca-----gaagaggtcagatttagg-atacattgtgtatatataacgg---agaggtgtagtca-gaacagatgtggaag--caagacagaggtcaaggctgact-caaggcttttagtctgagcagctgagtaaaaat----ggtac-cggttacatcaa-cagggaac--ggtgg-tgaaggagcagg-ttagaggg-gaaatagggag-cat-ggctttggacccttaacgttgg--ag------attggac----------agaggctagg---------------cgcgaaacccgagttcacg-gaattgatccaagctacagactgataattgg-----------------gattggtgagt-tacaatggcgttgcaagccatgaagctagctcagaccggctg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34603918 467 + 59248254 tctctctagctgctgtgttgagaataaagtactgggggcaagggttgacacagaggcaacttttagaaggctactgc-aataattc-----------ag-cccgagtaatcgtggtttgtgggagaggtgtagg-gatggagatgagca-----gaagaggtcagatttagg-atacattgtgtatatataacgg---agaggtgtagtca-gaacagatgtggaag--caagacagaggtcaaggctgact-caaggcttttagtctgagcagctgagtaaaaat----ggtac-cggttacatcaa-cagggaac--ggtgg-tgaaggagcagg-ttagaggg-gaaatagggag-cat-ggctttggacccttaacgttgg--ag------attggac----------agaggctagg---------------cgcgaaacccgagttcacg-gaattgatccaagctacagactgataattgg-----------------gattggtgagt-tacaatggcgttgcaagccatgaagctagctcagaccggctg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4472310 467 - 13342542 tctctctagctgctgtgttgagaataaagtactgggggcaagggttgacacagaggcaacttttagaaggctactgc-aataattc-----------ag-ccctagtaatcgtggtttgtgggagaggtgtagg-gatggagatgagga-----gaagaggtcagatttagg-atacattgtgtagatataacgg---agaggtgtagtca-gaacagatgtggaag--caagacagaggtcaagactgact-caaggcttttagtctgagcagctgagtaaaaat----ggtac-cggttacatcaa-cagggaac--ggtgg-tgaaggagcagg-ttagaggg-gaaatagggag-cat-ggctttggacccttaacgttgg--ag------attggac----------agaggctagg---------------cgcgaaacccgagttcacg-gaattgatccaagctacagactgataattgg-----------------gatttgtgagt-tacaatggcgttgcaagccatgaagctagttcagaccggctg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5402805 467 + 7714307 tctctctagctgctgtgttgagaataaagtactgggggcaagggttgacacagaggcaacttttagaaggctactgc-aataattc-----------ag-cccgagtaatcgtggtttgtgggagaggtgtagg-gatggagatgagga-----gaagaggtcagatttagg-atatattgtgtagatataacgg---agaggtgtagtca-gaacagacgtggaag--caagacagaggtcaagactgact-caaggcttttagtctgagcagctgagtaaaaat----ggtac-cggttacatcaa-cagggaac--ggtgg-tgaaggagcagg-ttagaggg-gaaatagggag-cat-ggctttggacccttaacgttgg--ag------attcgac----------agaggctggg---------------cgcgaaacccgagttcacg-gaattgatccaagctacagactgataattgg-----------------gattggtgagt-tacaatggcgttgcaagccatgaagctggttcagaccggctg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29210624 467 + 50890351 tctctctagctgctgtgttgagaataaagtactgggggcaagggttgacacagaagcaactttcagaaggctactgc-aataattc-----------ag-cccgagtaatcgtggtttgtgggagaggtgtagg-gatggagatgagga-----gaagaggtcagatttagg-atatattgtgtagatataacgg---agaggtgtagtca-gaacagatgtggaag--caagacagaggtcaagactgact-caaggcttttagtctgagcagctgagtaaaaat----ggtac-cggttacatcaa-cagggaac--ggtgg-tgaaggagcagg-ttagaggg-gaaatagggag-cat-ggctttggacccttaacgttgg--ag------attcgac----------ggaggctggg---------------cgcgaaacccgagttcacg-gaattgatccaagctacagactgataattgg-----------------gattggtgagt-tacaatggcgttgcaagccatgaagctggttcagaccGGCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 824076 467 - 2385121 tctctctagctgctgcgttgagaataaagtactgggggcaagggttgacacagaggcaacttttagaaggctactgc-aataattc-----------ag-cccgagtaatcgtggtttgtgggagaggtgtagg-gatggagatgagga-----gaagaggtcagatttagg-atatattgtgtagatataacgg---agaggtgtagtca-gaacagatgtggaag--caagacagaggtcaagactgact-caaggcttttagtctgagcagctgagtaaaaat----ggtac-cggttacatcaa-cagggaac--ggtgg-tgaaggagcagg-ttagaggg-gaaatagggag-cat-ggctttggacccttaacgttga--ag------attcgac----------agaggctggg---------------cgcgaaacccgagttcacg-gaattgatccaagctacagactgataattgg-----------------gattggtgagt-tacaatggcgttgcaagccatgaagctggttcagaccggctg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2269222 467 + 4274983 tctctctagctgctgtgctgagaataaagtactgggggcaatggttgacacagaagcaacttttagaaggctactgc-aataattc-----------ag-cccgagtaatcgtggtttgtgggagaggtgtagg-gatggagatgaggg-----gaagaggtcagatttagg-atatattgtgtagatataacgg---agaggtgtagtca-gaacagatgtggaag--caagacagaggtcaagactgact-caaggcttttagtctgagcagctgagtaaaaat----ggtac-cggttacatcaa-cagggaac--ggtgg-tgaaggagcagg-ttagaggg-gaaacagggag-cat-ggctttggacccttaacgttgg--ag------attcgac----------ggaggccggg---------------cgccaaacccgagttcatg-gaattgatccaagctatagactgataattgg-----------------gattggtgagt-tacaatggcgttgtaagccatgaagctggttcagaccggctg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28500928 457 + 49145316 tctctctggctgctgtgttgagaataaacta--gagggcaagggttgacacaaaagcaacttttagaaggctgctgc-aataactt-----------ag-ccagagtaatcgcggcttgtcgtgcagctgtagg-gatggagatgagga-----gaaggggtcagatttagg-aaatattctgtagacataac-----agaggtgtactca-gaacagatgtggagg--caagacagaggtcaaggctgact-caaggcttttagtctgagcagctgagtaaaaat----ggtac-ctgttacatcaa-tggggaac--ggtgg-tgaaggagcagg-ttagagga-gaaacagggag-cat-ggctttggacccttaacgtttg--agataccaattccac----------ag---------------------------aaatcggagtTCACG-GAATTGATCCAAGTTACAGACTGATACTTGG-----------------GATTGGTGAGT-TGCAATGGCGATGCAAGCCATTAGGCTGGTTCAGACCAGATG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5343567 423 + 8899380 tctccctggctgctgtgttgagaatacagtattgagagcaagggctgacacaaaggcaacttttagaaggctactgc-agtaattt-----------ag-ccagagtgaccgcggcttgtcgtacagctgtagg-gatggagat---ga-----gaaggggtcggatttagg-cgatattctgtagacataac-----agaggtgtagtca-caacagatgtggaag--caagacagaggtcaaggctgact-caaggcttttagtctgagcagctgggtgaaaat----ggtac-ctgttacatcaa-cggggaac--ggtgg-tgaaggagcagg-ttagagga-gaaacagggag-cat-ggctttggacccttaacgtttg--agatatcaattccac----------ag---------------------------aaatcggagtTCACG-GAATTGATCCAAGTTACAGACTGATAGTTGG-----------------GATTGGTGAGT-TGCAATGGC--------------------------------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1556005 423 - 2680843 tctctctggctgctgtgttgagaataaagtattgagggcaagggttgacacagaggcaacttttagaaggctactgc-aataattt-----------ag-ccagagtaatcgcggcttgtcgtacagctgcagg-gatggagatgagga-----gaaggggtcagatttagg-atatattctgtagacataac-----a-aggtgtagtca-gaacagatgtggagg--caagacagaggtcaaggctgact-caaggcttttagtctgagcagctgagtaaaaat----ggtac-ctgtt--atcag-tggggaac--ggtgg-tgaaggagcagg-ttagagga-gaaacagggag-cat-ggctttggacccttaacgtttg--agataccaattCCAC----------AG---------------------------AAATCGGAGTTCACG-GAATTGATCCAAGTTACAGACTGATACTTGG-----------------GATTGGTGAGT-TGCAATGGC--------------------------------- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 305712 455 - 4471408 tctctctggctgctgtgttgagaataaagtattgagggcaagggttgacacagaggcaacttttagaaggctactgc-aataattt-----------ag-ccagagtaatcgcggcttgtagtacagctgtagg-gatggagatgagga-----gaaggggtcagatttagg-atatattctgtagacataac-----agaggtgtagtca-gaacagatgtggagg--caagacagaggtcaaggctgact-caaggcttttagtctgagcagctgagtaaaaat----ggtac-ctgttacatcaa-tggggaac--ggtgt-----ggagcagg-ttagagga-gaaacagggag-cat-ggctttggacccttaacgtttg--agataccaattCCAC----------AG---------------------------AAATCGGAGTTCACG-GAATTGATCCAAGTTACAGACTGATACTTGG-----------------GATTGGTGAGT-TGCAATGGCGATGTAAGCCATAAGGCTGGTTCAGACCAGATG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5418084 478 + 5549422 tctcttcagctgctgtgttgaggataaactactg-ggtcaaaggcagccatggagggaaattttgtaagacttctgc-aataattc-----------tgacccgactaattgtggcttcttgtagcattgtagg-ggtagaaatgatgagaagggaagtgatcagattccgg-atgtattccatagatggaatgggcaagatttgcagtca-gaacagatgtgaaggt-taagagggaagtcaagggtgagtccaaggctcttggtctgaacagccgaataaa----------------ttaactcaa-tggggaa-------------ggagcaggtttagatgg-gggtcagggaa-tatgggctttggacacacaaaatttg--tactgtcaattcaacacacaactggagaggctgaagtgtgt-actgtttccatgaaactggagttcaca-gaacctatcaaagc-----------acttga-----------------gattggtcagtgtactgcggcactgaaagccatgagcccagatcacaccgtctg i otoGar3.GL873654 C 0 I 372 s mm10.chr7 111050896 463 - 145441459 tccccctgactgctgtgttaagaaaaacctagtaggggtaagag-------aaatagaattcttcgggagctactgccaacaactct----------gg-ccagggtaactgaggcgttatatagagctgtacg-gatggagacg--------------gtccagcctgaac-agaca--------------------agatttatagtta-ggacaggtgtggaggtgtaagac--------------aat-ccaggactggggtcttagctactaagcaaacgttcccggttcatagttacct----ccgagaac--aagct-agagggacgagt-ttggagta-aaaccgaagagttac-atctctggatgca-aagtttta--agatgccaatttggt----------atccgatcggagaGATGATCGTTATTAAGAAAGTGGAGCTGACATTAAGTGATCAAAGCGGCAGAGAAACACTTGGACTGGTGTTTCTTGCATAGTTAGTGACC-GGGAACATC-TTGAAAGCTAGGACAC-GGATCAAGCCGCATA i mm10.chr7 I 52 C 0 s canFam3.chr1 4560538 508 - 122678785 ---ccccggctgctgtgtggagagttaagtactgggggcaagaacagaggtagaaggaccttttaggaggcgattgc-ggtaaccccgggcagggaagg-gcaggggacgtggggtttgttgtagagaggcaggagatggagatggtga-----gaagtgatcagattcggg-tcacccattatcgatggagagggcaggatttgcaatca-gaacagatgtcgggg--tgagagagaagtccaggatgact-cca-------aggatgagcagttggataaa--c----agcac-cagttcccgcgg-tggtgaaccgagtggccgaaggttaatc-tcagagggaaaaaccgggag-cct-tggtttggagacacaaagttaatcagatgcggattaaacgtgcaactagagagaatgagggggtctacggctgatctgagtccagagttctcc-gaattgatcaaagcagcagacaaatgcctgg-----------------gattggtctgtgtagagtggccctgaaagccacgagcccagatgagagcatcCC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 267385 438 + 643850 tctttccagctgctgtgttgcaaataaactatagggggcaaggacaaaaggtaagggaacattcagaaggctactgt-aaaatcct-----------ga-cctctgtgattgtggcttattgtagggcagtagc-ggtgtaggttgtga-----gacgt-----------gc-tcatattttgtaggcaaaatggacaagatttgcagtcataaaaagctgtgacag--aa------aagtca--gtaagtt-taaggcttttcatcagggcatttgggtaaa--t----ggtac-caactacctcga-tggggaac--catga-agaaagagcaag-tttaggga--------ggag-taa-gcctttcgacatgcaaaatttg--aaatgccaattaaac----------acccaactgg------------------------agaggccagg-gagttcac---agctgcaggcaaatatttgg-----------------aactggtcagtataaaatggcactgaaagccatgagcttggatgacaccatcca i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3917309 1147 - 30143674 I a score=1797167.000000 s hg38.chr19_GL383574v1_alt 19699 181 + 155864 AATGAGCGGGACAGGAAGGGGCTGAAACACTTGAGTCCTTGTG---AGAGCCCCAG---CTCCAGGGGCAG----CCTCGGGG---------------------------GAAGCTCCCCGGGCGAT-GACTGC-GGTAATGGAGCCGTAGGAGCTCCACGAGGT-----GCA-GGTT------------------CAGC--------GTCTTAGAAGGATGAGCAGCGGCTC-------------GCCA-CAGCTCGGAGGCGGG s panTro5.chr19 36078550 181 + 61309027 AATGAGCGGGACAGGAAGGGGCTGAAACACTTGAGTCCTTGTG---AGAGCCCCAG---CTCCAGGGGCAG----CCTCGGGG---------------------------GAAGCTCCCTGGGCGAT-GACTGC-GGTAATGGAGCCGCAGGAGCTCCACGAGGT-----GCA-GGTT------------------CAGC--------GTCTTAAAAGGATGAGCAGCGGCTC-------------GCCA-CAGCTCGGAGGCGGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39830518 181 + 64411610 aatgagcgggacaggaaggggctgaaacacttgagtcctTGTG---AGAGCCCCAG---CTCCAGGGGCAG----CCTCGGGG---------------------------GAAGCTCCCTGGGCGAT-GACTGC-GGTAATGGAGCCGCAGGAGCTCCACGAGGT-----GCA-GGTT------------------CAGC--------GTCTTAAAAGGATGAGCAGCGGCTC-------------GCCA-CAGCTCGGAGGCGGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6248272 181 - 8369475 AATGAGCGGGACAGGAAGGGGCTGAAACACTTGAGTCTTTGTG---AGAGCCCCAG---CTCCAGAGGCAG----CCTCGGGG---------------------------GAAGCTCCCTGGGCGAT-GACGGC-GGTAATGGAGCCGTAGGAGCTCCACGAGGT-----GCA-GGTT------------------CAGC--------GTCTTAAAAGGATGAGCAGCGGCTC-------------GCCA-CAGCTCGGAGGCGGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63843283 181 - 106955855 AATGAGCTGGACAGGAAGGGGCTGAAACACTTGAGTCCTTGTG---AGAGCCCCAG---CTCCAGGAGCAG----CCTCGGGG---------------------------AAAGCTCCCTGGGCGAT-GGCTGC-GGTAATGGAACCGTGGGAGCTCCACGAGGT-----GCA-GGTT------------------CAGC--------GTCTTAAAAGGATGAGCAGCGGCTC-------------GCCA-CAGCTCGGAGGCGAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30151522 180 + 53671032 aatgagagggacaggaagggactaaaacac-tgagccgtcggg---agagccccag---ctccaggggcag----cctcgggg---------------------------gaaGCTCCCTGGACGAT-GGCTGC-GGTAATAGAGCCGTAGAAGCTCCACGAGGT-----GCA-GGTT------------------CAGT--------GTCTTAAAAGGATGAGCAGCGGCTC-------------GCCA-CAACTCGGAGGCGGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34604385 180 + 59248254 aatgagagggacaggaagggactaaaacac-tgagccgtcggg---agagccccag---ctccaggggcag----cctcgggg---------------------------gaaGCTCCCTGGACGAT-GGCTGC-GGTAATAGAGCCGTAGAAGCTCCACGAGGT-----GCA-GGTT------------------CAGT--------GTCTTAAAAGGATGAGCAGCGGCTC-------------ACCA-CAACTCGGAGGCGGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4472777 180 - 13342542 aatgagagggacaggaagggactaaaacac-tgagccgtcggg---AGAGCCCCAG---CTCCAGGGGCAG----CCTCGGGG---------------------------GAAGCTCCCTGGACGAT-GGCTGC-GGTAATAGAGCCGTAGGAGCTCCACGAGGT-----GCA-GGTT------------------CAGT--------GTCTTAAAAGGATGAGCAGCGGCTC-------------GCCA-CAACTCGGAGGCGGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5403272 180 + 7714307 aatgagagggacaggaagggactaaaacac-tgagtcgtcggg---agagccccag---cttcaggggcag----cctcgggg---------------------------GAAGCTCCCTGGACGAT-GGCTGC-GGTAATAGAGCCGTAGGAGCTCCACGAGGT-----GCA-GGTT------------------CAGT--------GTCTTAAAAGGATGAGCAGCGGCTC-------------GCCA-CAACTCGGAGGCGGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29211091 180 + 50890351 AATGAGAGGGACAGGAAGGGACTAAAACAC-TCAGTCGTCGGG---AGAGCCCCAG---CTCCAGGGGCAG----CCTCGGGG---------------------------GAAGCTCCCTGGACGAT-GGCTGC-GGTAATAGAGCCGTAGGAGCTCCACGAGGT-----GCA-GGTT------------------CAGT--------GTCTTAAAAGGATGAGCAGCGGCTC-------------GCCA-CAACTCGGAGGCGGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 824543 180 - 2385121 aatgagagggacaggaagggactaaaacac-tgagtcgtcggg---agagccccag---ctccaggggcag----cctcgggg---------------------------gaaGCTCCCTGGACGAT-GGCTGC-GGTAATAGAGCCGTAGGAGCTCCACGAGGT-----GCA-GGTT------------------CAGT--------GTCTTAAAAGGATGAGCAGCGGTTC-------------GCCA-CAACTCGGAGGCGGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2269689 180 + 4274983 aatgagagggacaggaaggggctgaaacac-tgaggccttggg---agagccccag---ctccaggggcag----cctcgggg---------------------------GAAGCTCCCTGGACGAT-GGCTGC-GGTAATAGAGCCGTGGGAACTCCACGAGGT-----GCA-GGTT------------------CAGT--------GTCTTAAAAGGATGAGCAGCGGCTC-------------GCCA-CAACTCGGAGGCGGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28501385 179 + 49145316 AACGAGCGGGACAGGGC-GAGCTGAAAAAC-TGGGTCCTTTTG---AGAGCCCCAG---CTCCAGGAGCAA----CCTCAGGG---------------------------GAAACTTCCTGGGCGAT-GGCTGC-GGTAATGGAGCCGTGGAAGCTCCACGAGGT-----ACA-GGTT------------------CAGC--------GTCTTAAAAGGATGAGCAGCGACTC-------------GCCA-AAGCTCGGAGGCAGG i calJac3.chr22 C 0 I 4 s saiBol1.JH378197 5343990 160 + 8899380 --------------------GCTGACAAAC-GGGGTCCTTTTG---AGAGTCCCAG---CTCCAGGAGCAA----CCTCGGGG---------------------------GAAACTTCCTGGGCGAT-GGCTGC-GGTAATGGAGCCGTGGGAGCTCCACGAGGT-----GCA-GGTT------------------CAGC--------GTCTTAAAAGGATGAGCAGCGACTC-------------GCCA-GAGCTCGGAGGTGGG i saiBol1.JH378197 C 0 M 564 s cebCap1.NW_016107633v1 1556428 159 - 2680843 --------------------GCTGAAAAAC-TGGGTCCTTTTG---AGAGCCCCAG---CTCCAGGAGCAA----CCTCGGGG---------------------------GAAACTTCCTGAGCGAT-GGCTGC-GGTAATGGAGCCGTGGGAGCTCCACGAGGT-----GCA-GGTT------------------CAGC--------GTCTTAAAAGGATGAACAGCGACTC-------------GCCA-AAGCTCGGAGGCGG- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 306167 179 - 4471408 AACGAGCGGGACAGGGC-GAGCTGAAAAAC-TGGGTCCTTTTG---ACAGCCCCAG---CTCCAGGAGCAA----CCTCGGTG---------------------------GAAACTTCCTGGGCGAT-GGCTGT-GGTAATGGAGCCGTGGGAGCTCCACGAGGT-----GCG-GGTT------------------CAGC--------GTCTTAAAAGGATGAGCAGCGACTT-------------GCCA-AAGTTCGGAGGCGGG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5418934 203 + 5549422 AAAGAGTTGAACCGTGCGGGGCTAAAAAAT-TGAGTTGTTGTGACAAGAGTCCCAG---CTCTAGAAGCAA----CCT-AGGG---------------------------GAAACTCTTTGGGCGAT-GGATGCTGTTAACAGGGTCATGAGAGCTCCATGAGAT-----GCACAGTTGCCTCAAAAAGGAAAAGACAAT--------GTCTTAAATGGATGACCAGCAGCTC-------------ATGAGAAGCTTGGAGGCGGG i otoGar3.GL873654 I 372 C 0 s mm10.chr7 111051359 154 - 145441459 --------------AAAAGGGTTGG---AC-TCAGTTTGGGGGAC-AGAGTCCCAGAGCCTCCCGGAGCGGCAGCCCTTGGAG------------------------TGTGAGACTCCTCAGGCGAA-GATGGC-TGCTCTGGCG----------TTTAC--AGT-----GAG-AGTT------------------CCGT--------GGCCCGCGGAG------AGCGGCT---------------CCG-GAGCTGGGAGGCGA- i mm10.chr7 C 0 C 0 s canFam3.chr1 4561046 188 - 122678785 --------------------------------GAGGTGTTGGA-C-AGAGTCCCAG---CTCCAGCAGCTG----CGAAGGGGAGAAGgggggagggggaaggggagggggGGACGGGCTGGGTAATGGGATGC-TGCGATGGAGCCCGGGGAGCTTCCAGAGGG-----CCA-----------------------CAGT-------AGCCTCGAACGGGAAAGGACCGGGTCCTAACGGGGCTCGGCGG-GAGCTCGGGGGCGGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 267823 192 + 643850 aaagtgttggaaagagtagggttaaggatc--gagtcttcggcat-acagtcccaga--ctccaggagtag----caagatgg---------------------------gga--taaaagggcgac-aaacac-tgtaatgggaccat--gagTTTCATGAGTTCTCCAATT-GCCT------------------caactgaggaaaggttttaagggatgactaggagttg-------------ggaaggagctttaaggcggg i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3917309 1147 - 30143674 I a score=2122879.000000 s hg38.chr19_GL383574v1_alt 19880 236 + 155864 TGGGCAGCGCTCCAGGCCGAGGGCCCCGCGTCGGC-AAAGACA--CAGGA-CCCACGACAAGGC-----------------------GGCCACGGCCTGAGTCAAAAGG---AAGGCCGC--GCGCCTCCTCTCCAGCCCGCAGCAAGC--GGGTGC----CACGAGGCACTCAGCCGGTC--CCCGAAG---TTCCTCTCACGCGGCCCCAAG---------A--CCACCACC--GT----AGTCCAGGCC-AACAAGCGCTGCC---GGGACTCCCGAGGCCA--CGA-ATGAGCCGGGAG s panTro5.chr19 36078731 236 + 61309027 TGGGCAGCGCTCCAGGCCAGGGGCCCCGCGTCGGC-AAAGACA--CAGGA-CCCACGACAAGGC-----------------------GGCCACGGCCTGAGTCAAAAGG---AGGGCCGC--CCGCCTCCTCTCCAGCCCGCAGCAAGC--GGGTGC----CAGGAGGCACTCAGCCGGTC--CCCGAAG---TTCCTCTCACGCGGCCCCAAG---------A--CCACCACC--GT----AGTCCAGGCC-AAGAAGCGCTGCC---GGGACTCCCGAGGCCA--CGA-ATGAGCCGGGAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39830699 236 + 64411610 TGGGCAGCGCCCCAGGCCAGGGGCCCCGCGTCGGC-AAAGACA--CAGGA-CCCACGACAAGGC-----------------------GGCCACGGCCTGAGTCAAAAGG---AGGGCCGC--CCGCCTCCTCTCCAGCCCGCAGCAAGC--GGGTGC----CAGGAGGCACTCAGCCGGTC--CCCGAAG---TTCCTCTCACGCGGCCCCAAG---------A--CCACCACC--GT----AGTCCAGGCC-AAGAAGCGCTGCC---TGGACTCCCGAGGCCA--CGA-ATGAGCCGGGAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6248453 236 - 8369475 TGGGCAGCGCTCCAGGCCGAGGGCCCCGCGTCGGC-AAAGACA--CAGGA-CCCACGACAAGGC-----------------------GGCCACGGCCTGAGTCAAAAGG---AGGGCCGC--GCGCCTCCTCTCCAGCCCGCAGCAAGC--GGGTGC----CACGAGGCATTCAGCCGGTC--CCCGAAG---TTCCTCTCACGCGGCCCCAAG---------A--CCACCACC--GT----AGTCCAGGCC-AAGAAGCGCCGCC---GGGACTCCCGAGGCCA--CGA-ATGAGCCGAGAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63843464 236 - 106955855 TGGGCAGCGCTCCAGGCCGAGGGCCCCGCGTCGGC-AAAGACA--CAGGA-CCCACGACAAGGC-----------------------GACCACGGCCTGAGTCAAAAGG---AGGGCCGC--GCGCCTCCTCTCCAGCCCGCAGCAAGC--GGGTGC----CACGAGGCACTCTGCCGGTC--CCCGAAG---TTCCTCTCACGCGGCCCCAGG---------A--CCGCCGCC--GT----AGTCCAGGCC-AAAAAGCGCTGCG---GGGACTCCCGAGGCCG--CGA-ATGAGCCAGGAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30151702 235 + 53671032 TGGGCAGCGCTCCAGGCGGAGGGCCCCGCGTCGGC-AAAGACA--CAGGA-CCCACGACAAGGC-----------------------GGCCAAGGCCTGAGTCAAAAGG---AGGGCCGC--GCGCCTCCTCTCCAGCCCGCAGCAAGC---GGTGC----CACGAGGCACTCAGCCGGTC--CCCGAAG---TTCCTCTCACGCGGCCCCAGG---------A--CCACCGCC--GT----AGCCCAAGCC-AATAGGCGCTGCC---GGGACTCCCGAGGCCG--CGA-AGGAGCCGGGAG i rheMac8.chr19 C 0 I 14 s macFas5.chr19 34604565 235 + 59248254 TGGGCAGCGCTCCAGGCGGAGGGCCCCGCGTCGGC-AAAGACA--CAGGA-CCCACGACAAGGC-----------------------GGCCAAGGCCTGAGTCAAAAGG---AGGGCCGC--GCGCCTCCTCTCCAGCCCGCAGCAAGC---GGTGC----CACGAGGCACTCAGCCGGTC--CCCGAAG---TTCCTCTCACGCGGCCCCAGG---------A--CCACCGCC--GT----AGCCCAAGCC-AATAGGCGCTGCC---GGGACTCCCGAGGCCG--CGA-AGGAGCCGGGAG i macFas5.chr19 C 0 I 14 s macNem1.NW_012011689v1 4472957 235 - 13342542 TGGGCAGCGCTCCAGGCGGAGGGCCCCGCGTCGGC-AAAGACA--CAGGA-CCCACGACAAGGC-----------------------GGCCAAGGCCTGAGTCAAAAGG---AGGGCCGC--GCGCCTCCTCTCCAGCCCGCAGCAAGC---GGTGC----CACGAGGCACTCAGCCGGTC--CCCGAAG---TTCCTCTCACGCGGCCCCAGG---------A--CCACCGCC--GT----AGCCCAAGCC-AATAGGCGCTGCC---GGGACTCCCGAGGCCG--CGA-AGGAGCCGGGAG i macNem1.NW_012011689v1 C 0 I 14 s cerAty1.NW_012005268v1 5403452 235 + 7714307 TGGGCAGCGCTCCAGGCGGAGGGCCCCGCGTAGGC-AAAGACA--CAGGA-CCCACGACAAGGT-----------------------GGCCAAGGCCTGAGTCAAAAGG---AGGGCCGC--GCGCCTCCTCTCCAGCCCGCAGCAAGC---GGTGC----CACAAGGCACTCAGCCGGTC--CCCGAAG---TTCCTCTCACGCGGCCCCAGG---------A--CCACCGCC--GT----AGCCCAAGCC-AATAGGCGCTGCC---GGGACTCCCGAGGCCG--CGA-AGGAGCCGGGAG i cerAty1.NW_012005268v1 C 0 I 14 s chlSab2.chr6 29211271 235 + 50890351 TGGGCAGCGCTCCAGGCGGAGGGCCCCGCGTCGGC-AAAGACA--CAGGA-CCCACGACAAGGC-----------------------GGCCAAGGCCTGAATCAAAAGG---AGGGCCGC--GCGCCTCCTCTCCAGCCCGCAGCAAGC---GGTGC----CACGAGGCACGCAGCCGGTC--CCCAAAG---TTCCTCTCACGCGGCCCCAGG---------A--CCACCGCC--GT----AGCCCAAGCC-AACAGGCGCTGCC---AGGACTCCCGAGACCG--CAA-AGGAGCCGGGAG i chlSab2.chr6 C 0 I 14 s manLeu1.NW_012102454v1 824723 235 - 2385121 TGGGCAGCGCTCCAGGCGGAGGGCCCCGCGTCGGC-AAAGACA--CAGGA-CCCACGACAAGGC-----------------------GGCCAAGGCCTGAGTCAAAAGG---AGGGCCGC--GCGCCTCCTCTCCAGCCCGCAGCAAGC---GGTGC----CACAAGGCACTCAGCCGGTC--CCCGAAG---TTCCTCTCACGCGGCCCCAGG---------A--CCACCGCC--GT----AGCCCAAGCC-AATAGGCGCTGCC---GGGACTCCCGAGGCCG--CGA-AGGAGCCGGGAG i manLeu1.NW_012102454v1 C 0 I 673 s colAng1.NW_012111697v1 2269869 236 + 4274983 TGGGCAGCGCTCCAGGCGGAGGGCCCCGCGTCGGC-AAAGACA--CAGGA-CCCACGACAAGGC-----------------------GGCCAAGGCCTGAGTCAAAAGG---AGGGCCGC--GCGCCTCCTCTCCAGCCCGCAGCAAGC--GGGTGC----CACGAGGCACTCAGCCGGTC--CCCGAAG---TTCCTCTCACGCGGCCCCAGG---------A--CCACCGCC--GT----AGCCCAGGCC-AATAGGCGCTGCC---GGGAAACCCGAGGCTG--CGA-CGGAGCCCGGAG i colAng1.NW_012111697v1 C 0 I 14 s calJac3.chr22 28501568 233 + 49145316 TGGGCAGCGCTCCAGACGGGGGGCCTCGCGTCGGC-AAAGACA--CGGGA-CCCACGACAAAGA-----------------------GGCCGCGGCCTGGGTC---AGG---AGGGCCGC--GCGCCTCCTCTCCAGCCCTCAGCGAGC--GGGTGC----CACGAGGCACTCAGCAAGTC--CCCGAAA---TTCCTCTCACGCTGCCCCAGG---------A--CTGCCGTC--GT----AGCCCAGGTA-AATAGGCGCTGAC---AGGACTCCCGAAGCCG--CCA-AGCAGTCGGGAA i calJac3.chr22 I 4 C 0 s cebCap1.NW_016107633v1 1556587 218 - 2680843 -------------------AGGGCCTCGCGTCGGC-AAAGACA--CGGGACCCCACGACAAAGA-----------------------GGCCGCGGCCTGGGTCAGAAGG---AGGGCCGC--GCGCCTCCTCTCCAGCCCTCAGCGAAC--GGGTGC----CACGAGGCACTCAGCTAATC--CCCGAAA---TTCCTCTCACGCGGCCCCGGG---------A--CCACCGTC--GT----AGCCCAGGTA-AATAGGCGCTGAC---AGGACTCACGAGGCCG--CGA-AGTAATCGGGAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 306346 236 - 4471408 TGGGCAGCGCTCCAGGCGGAGGGCCTCGCGTCGGC-AAAGACA--CGGGA-CCCACGACAAAGA-----------------------GGTCGCGGCCTGGGTCAGAAGG---AGGGCCGC--GCGGCTCCTCTCCAGCCCTCAGCGAGC--GGGTGC----CACGAGGCACTCAGCAAGTC--CCCGAAA---TTCCTCTCACGCGACCCCGGG---------A--CCACCGTC--GT----AGCCCAGGTA-AATAAGCGCTGAC---AGGACTCCCGAGGCCG--CAA-AGCAGTCGGGAG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5419137 276 + 5549422 TGTCCAACTTTCCAGGTGGAGGGACCCACCTTTGCAAAAGATA--CAAGA-CTCCAGACAAGGTACGACGCGCCTGGAAAT---GGAGGGTGCAGCCGGCGTCAAAAGG---AGAGCTACCTGTGTCTCCGCTCCCGCCCTCGGGATGC--AGGTACCGTACATAAGGCACTTCTCCTCTCCTCCCCAAA---CTCCTCCAAGAGGGGTTGGAGGGGAGGCCAG--CAGGCGCCGAGT----AGATCAGGCCGAATACGGTTTATC---TGGA-TACAGAGACCA--CTAGACGAGCCGGAG- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111051513 186 - 145441459 -------------------------CCGCTT--AC-AAAGACT--CTGGG-CTCGTACCAAAGT-----------------------G----CAGCCCGCCTAGAAATGGCAGAGGCCGC--AGTCAGCATCACCA----------------GGCGG----GATG-GGCCCTCGTCTAGTCTTCCCGCGA---CATCT---AGGTGCCGTGAAA---------A--CCTTCCAC--GTCGGGAGCGCAAGCC-AA---GCGCT--C---TGGGCCGCCGCGG-------A-AAGAGCCCGGGA i mm10.chr7 C 0 C 0 s canFam3.chr1 4561234 262 - 122678785 AGGGCCCCTTTCCAGGCTGAGGGATCCGCATTCGC---CGACG--CAGGA-CGCAGGACAAGATGCGACGGGTCTGCAAATGGCGGAGGCCGCGGGGGAGGCCGA---G---AGCGCCGC--GCGCGCCCCCACCGCCGCCCACCGAGTCCCGGCGC----CGCCAGGTACGCCGCCTCTC--CCTCAGTCGCCGCCTCTCAGGCCGCGCGAGC---------A--CGGCGGCC--GG----GGACTCGAcc-cggcggcgccgccgcggagacccccgaggccgcccgg-ggaggcccag-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 268015 263 + 643850 tgggcaactttccaggcagaaggatccgcatctgc-aaagacaaccagga-ctcctgacacggttcgagtggtccagaaacggccgaggcagcagcaggggtcagcaag---agTCGCGC--GTGCCTCCACACCAGCCTGAGGTATCT--AGGCGC----TAGGAGAAACTGAACCCCGC--CCCCGCG---ACCGCCTTCCTCGGCGCCGGG---------AGCCGGACAGC--GA----TACGCAGGCC-ACGGGTATTCTGC---TGTACCACCGAAACTG--CAG-GGCCGTCCGGAG i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3917309 1147 - 30143674 I e saiBol1.JH378197 5344150 564 + 8899380 M a score=65610.000000 s hg38.chr19_GL383574v1_alt 20116 7 + 155864 CCACCAG s panTro5.chr19 36078967 7 + 61309027 CCACCAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39830935 7 + 64411610 CCACCAG i panPan2.chr19 C 0 M 168 s gorGor5.CYUI01015150v1 6248689 7 - 8369475 CCACCAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63843700 7 - 106955855 CCTCCAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30151951 7 + 53671032 CCGCCAG i rheMac8.chr19 I 14 C 0 s macFas5.chr19 34604814 7 + 59248254 CCGCCAG i macFas5.chr19 I 14 C 0 s macNem1.NW_012011689v1 4473206 7 - 13342542 CCGCCAG i macNem1.NW_012011689v1 I 14 C 0 s cerAty1.NW_012005268v1 5403701 7 + 7714307 CCGCCAG i cerAty1.NW_012005268v1 I 14 C 0 s chlSab2.chr6 29211520 7 + 50890351 CCGCCAG i chlSab2.chr6 I 14 C 0 s colAng1.NW_012111697v1 2270119 7 + 4274983 CCGCCAG i colAng1.NW_012111697v1 I 14 C 0 s calJac3.chr22 28501801 7 + 49145316 CCACCCG i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1556805 7 - 2680843 CCACCGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 306582 7 - 4471408 CCACCCG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5419413 7 + 5549422 CCGCTCG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111051699 7 - 145441459 CCGTCCG i mm10.chr7 C 0 C 0 s canFam3.chr1 4561496 7 - 122678785 ccgcccg i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 268278 7 + 643850 CTTTCCG i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3917309 1147 - 30143674 I e saiBol1.JH378197 5344150 564 + 8899380 M e manLeu1.NW_012102454v1 824958 673 - 2385121 I a score=4260.000000 s hg38.chr19_GL383574v1_alt 20123 2 + 155864 TA s panTro5.chr19 36078974 2 + 61309027 TA i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6248696 2 - 8369475 TA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63843707 2 - 106955855 CC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30151958 2 + 53671032 CC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34604821 2 + 59248254 CC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4473213 2 - 13342542 CC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5403708 2 + 7714307 CC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29211527 2 + 50890351 CC i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2270126 2 + 4274983 CC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28501808 2 + 49145316 CC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1556812 2 - 2680843 CC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 306589 2 - 4471408 CC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5419420 2 + 5549422 CA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111051706 2 - 145441459 TG i mm10.chr7 C 0 I 1 s canFam3.chr1 4561503 2 - 122678785 cc i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 268285 2 + 643850 TA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3917309 1147 - 30143674 I e saiBol1.JH378197 5344150 564 + 8899380 M e manLeu1.NW_012102454v1 824958 673 - 2385121 I e panPan2.chr19 39830942 168 + 64411610 M a score=557211.000000 s hg38.chr19_GL383574v1_alt 20125 48 + 155864 GCCGGCC-AAGTCTCGCGAGAG----CGCGGCCTCGCCCT-CCCAGCATGCCCC s panTro5.chr19 36078976 48 + 61309027 GCCGGCC-AAGTCTCGCGAGAG----CGCGGCCTCGCCCT-CCCAGCATGCCCC i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6248698 48 - 8369475 GCCGGCC-AAGTCTCGCGAGAG----CGCGGCCTCGCCCT-CCCAGCATGCCCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63843709 48 - 106955855 GTCGGCC-AAGTATCGCGAGAG----CGCGGCCTCGCCCT-CCCAGCATGCCCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30151960 48 + 53671032 GTCGGCC-AAGTCTCGCGACAG----CGCGGCCCAGCCCT-CCCAGCATGCCcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34604823 48 + 59248254 GTCGGCC-AAGTCTCGCGACAG----CGCGGCCCAGCCCT-CCCAGCATGCCcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4473215 48 - 13342542 GTCGGCC-AAGTCTCGCGACAG----CGCGGCCTAGCCCT-CCCAGCATGCCCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5403710 48 + 7714307 GTCGGCC-AAGTCTCGCGACAG----TGCGGCCTAGCCCT-CCCAGCATGCCcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29211529 48 + 50890351 GTCGGCC-AAGTCTCGCGACAG----CGCGGCCTACTCCT-CCCAGCATGCCcc i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2270128 48 + 4274983 GTCGGCG-AAGTCTCGCGACAG----CGCGGCCTCACCCT-CCCAGCATGCCCC i colAng1.NW_012111697v1 C 0 I 464 s calJac3.chr22 28501810 48 + 49145316 ACCTGCC-AAGTCTCGCGAGGG----CGCGGCCTCGCCCT-CCCAGCATGCTCC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1556814 48 - 2680843 GCCGGCC-AAGTATCGcgaggg----cgcggcctcgccct-cccagcatgcccc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 306591 48 - 4471408 GCCGGCC-AAGTCTCGcgaggg----cgcggcctcgccct-cccagcatgcccc i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3918456 49 - 30143674 GCCGGCC-AAGTCTCGCGAGAG---CCGCGGCCTCGCCCT-CCCAGCATGCCCC i micMur3.chr22 I 1147 C 0 s otoGar3.GL873654 5419422 48 + 5549422 GCCGGCC-AAGTCTCGCGAGAG----CGCAGCCTCGCCCT-CCCGGCATGCCCC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111051709 52 - 145441459 GCTCGGC-GAGTCTCGCGAGAAAGCACGCCGCCTCGCCCT-CCCGGCATGCCCT i mm10.chr7 I 1 I 3 s canFam3.chr1 4561505 50 - 122678785 gccggccTGAGTCTCGCGAGAG----CGCGGCCTCACCTTGCCCAGCATGCCCC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 268287 47 + 643850 -ACTACC-GAGTCTCGCGAGAG----CGCGGCCTCGCCGA-CCCAGCATGCCCT i dasNov3.JH563638 C 0 C 0 e saiBol1.JH378197 5344150 564 + 8899380 M e manLeu1.NW_012102454v1 824958 673 - 2385121 I e panPan2.chr19 39830942 168 + 64411610 M a score=1212764.000000 s hg38.chr19_GL383574v1_alt 20173 106 + 155864 Gcgccgccgccgctgccgccgccgccgccgccgc---------cgcgccgcGGCTTGAGGGCGGGAGGCTGGGGGAGGGT-AGCGGAGCCGGCGCCGCCGCCATGTTGGGTCTGAA s panTro5.chr19 36079024 103 + 61309027 Gcgccgccgccgctgccgccgccgccgccgccgc------------gccgcGGCTTGAGGGCGGGAGGCTGGGGGAGGGT-AGCGGAGCCGGCGCCGCCGCCATGTTGGGTCTGAA i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6248746 115 - 8369475 GcgccgccgacgctgccgccgccgccgccgccgccgccgccgccgcgccgcGGCTTGAGGGCGGGAGGCTGGGGGAGGGT-AGCGGAGCCGGCGCCGCCGCCATGTTGGGTCTGAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63843757 103 - 106955855 Gcgccgccgccgctgccgccgccgccgccgccgc------------gccgcGGCTTGAGGGCGGGAGGCTGGGGGAGGGT-AGCGGAGCCGGCGCCGCCGCCATGTTGGGTCTGAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30152008 103 + 53671032 gcgccgccgccgctgccgctgccgccgccgccgc------------gccgcGGCTTGAGGGCGGGAGGCTGGGGGAGGGT-AGCGGACCCGGCGCCGCCGCCATGTTGGGTCTGAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34604871 103 + 59248254 gcgccgccgccgctgccgctgccgccgccgccgc------------gccgcGGCTTGAGGGCGGGAGGCTGGGGGAGGGT-AGCGGACCCGGCGCCGCCGCCATGTTGGGTCTGAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4473263 103 - 13342542 Gcgccgccgccgctgccgctgccgccgccgccgc------------gccgcGGCTTGAGGGCGGGAGGCTGGGGGAGGGT-AGCGGACCCGGCGCCGCCGCCATGTTGGGTCTGAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5403758 103 + 7714307 gcgccgccgccgctgccgctgccgccgccgccgc------------gccgcGGCTTGAGGGCGGGAGGCTGGGGGAGGGT-AGCGGACCCGGCGCCGCCGCCATGTTGGGTCTGAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29211577 103 + 50890351 gcgccgccgccgctgccgctgccgccgccgccgc------------gccgcGGCTTGAGGGCGGGAGGCTGGGGGAGGGT-AGCGGACCCGGCGCCGCCGCCATGTTGGGTCTGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28501858 103 + 49145316 Gcgccgccgccgctgccgccgcggccgccgccgc------------gccgcGACTTGAGGGCGGGAGGCTGGGGGAGGGT-AGCGGAGCCGGCACCGTCGCCATGTTGGGTCTGAA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1556862 103 - 2680843 gcgctgccgccgctaccgccgcggccgccgccgc------------gccgcggcTTGAGGGCGGGAGGCTGGGGGAGGGT-AGCGGAGCCGGCACCGCCGCCATGTTGGGTCTGAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 306639 103 - 4471408 gcgccgccgccgcggccgccgcggccgccgccgc------------gccgcggcTTGAGGGCGGGAGGCTGGGGGAGGGT-AGCGGAGCCAGCACCGCCGCCATGTTAGGTCTGAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3918505 103 - 30143674 Gcgccgccgccgctgccgccgccgccgccgccgc------------gccgcGGCTAGAGGGCGGGAGGCTGGGGGAGGGT-AGCGGAGCCGGCGCTGCCGCCATGTTAAGTCTGAA i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5419470 98 + 5549422 Gcgccgccgccgctgccgccgccgccgc-----c------------gccgcGGCTAGAGGGCGGGAGGCTGGGGGAGGGT-AGCGGAGCCGGCGCTGCCGCCATGTTAGGTCTTAG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111051764 104 - 145441459 ccgccgccgctgctgccgccgccgccgccgccgc------------gccgcGGTTTGAGGGCGGGAGGCTGGGGGAGGGTAAGCGGAGCCGGCGCGGCCGCCATGTTGGTTCTGAG i mm10.chr7 I 3 C 0 s canFam3.chr1 4561555 103 - 122678785 Gcgcagctgccgctgctgccgccgccgcggccgc------------gccgcggcTAGAGGCCGGGAGCCTGGGGGAGGGT-AGCGGAGCCGGCGCCGCCGCCATGTTGGGTCTGAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 268334 103 + 643850 Gcgccgccgctgctgccgccgccgccgccgccgc------------gccgcGGCTTGAGGGCGGGAGGCTGGGGGAGGGT-AGCGGAGCCGGCACTGCCGCCATGTTGGGTTTGAG i dasNov3.JH563638 C 0 C 0 e saiBol1.JH378197 5344150 564 + 8899380 M e colAng1.NW_012111697v1 2270176 464 + 4274983 I e manLeu1.NW_012102454v1 824958 673 - 2385121 I e panPan2.chr19 39830942 168 + 64411610 M a score=373477.000000 s hg38.chr19_GL383574v1_alt 20279 34 + 155864 GC-GGCTGCTGT-AGGCGCCGACG------------G---AGCGAGCG----GGC---- s panTro5.chr19 36079127 38 + 61309027 GC-GGCTGCTGT-AGGCGCCGACG------------g---agcgagcgagcgggc---- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39831110 34 + 64411610 GC-GGCTGCTGT-AGGCGCCGACG------------G---AGCGAGCG----GGC---- i panPan2.chr19 M 168 C 0 s gorGor5.CYUI01015150v1 6248861 34 - 8369475 GC-GGCTGCTGT-AGGCGCTAACG------------G---AGCGAGCG----GGC---- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63843860 34 - 106955855 GC-GGCTGCTGT-AGGCGCCGACG------------G---AGCGAGCG----GGC---- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30152111 34 + 53671032 GC-GGCTGCTGT-AGGTGTCGACG------------G---AGCTAGCG----GGC---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34604974 34 + 59248254 GC-GGCTGCTGT-AGGTGTCGACG------------G---AGCTAGCG----GGC---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4473366 34 - 13342542 GC-GGCTGCTGT-AGGTGTCGACG------------G---AGCTAGCG----GGC---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5403861 34 + 7714307 GC-GGCTGCTGT-AGGTGTCGACG------------G---AGCTAGCG----GGC---- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29211680 34 + 50890351 GC-GGCTGCTGT-AGGTGTCGACG------------G---AGCTAGCG----GGC---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28501961 34 + 49145316 GC-GGCTGCTGT-AGGCGCCGACC------------T---AGCGAGCG----GGC---- i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1556965 34 - 2680843 GC-GGCTGCTGT-AGGCGCCGACG------------G---AGCGAGCA----GGC---- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 306742 34 - 4471408 GC-GGCTGCTGT-AGGCGCCGACG------------G---AGCGAGCG----GGT---- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3918608 34 - 30143674 GC-GGCTGCTGT-AGGCGCCGACA------------G---AGCGAGCA----GGC---- i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5419568 34 + 5549422 GC-GACTGCTGT-AGGCGCCGACG------------G---AGCGAGCG----GGC---- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111051868 47 - 145441459 GC-GGCTGCTGTGAGGCGCCGACGGAGGGAgcgagcg---agcgggcg----ggc---- i mm10.chr7 C 0 C 0 s canFam3.chr1 4561658 35 - 122678785 GCAAAATGCTGT-AGGCGCCGACG------------G---AGCGAGCG----GGC---- i canFam3.chr1 C 0 M 836 s dasNov3.JH563638 268437 41 + 643850 GC-GGCTGCTGT-AGGGGCGAGCA------------GGTTAGCAGGCG----TGCGTGC i dasNov3.JH563638 C 0 C 0 e saiBol1.JH378197 5344150 564 + 8899380 M e colAng1.NW_012111697v1 2270176 464 + 4274983 I e manLeu1.NW_012102454v1 824958 673 - 2385121 I a score=780748.000000 s hg38.chr19_GL383574v1_alt 20313 72 + 155864 GTGCGGAGCGGGCGACAGTGGCGTGGGATCTGCCTCTCTGCGAGCAGCTG---GGAGCGGCGGC---GGCGGCGCCAT s panTro5.chr19 36079165 72 + 61309027 gtgcggagcgggcgaCAGTGGCGTGGGATCTGCCTCTCTGCGAGCAGCTA---GGAGCGGCGGC---GGCGGCGCCAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39831144 72 + 64411610 GTGCGGAGCGGGCGACAGTGGCGTGGGATCTGCCTCTCTGCGAGCAGCTG---GGAGCGGCGGC---GGCGGCGCCAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6248895 72 - 8369475 GTGCGGAGCGGGCGACAGTGGCGTGGGATCTGCCTCTCTGCGAGCAGCTG---GGAGCGGCGGC---GGCGGCGCCAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63843894 72 - 106955855 GTGCGGAGCGGGCGACAGCGGCGTGGGATCTGCCTCTCTGCGAGCAGCTG---GGAGCGGCGGC---GGCGGCGCCAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30152145 72 + 53671032 GTGCGGAGCGGGCGACAGCGGCGTGGGATCTGCCTCTCTGCGAGCAGCCG---GGAGCGGCGGC---GGCGGCGCCAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34605008 72 + 59248254 GTGCGGAGCGGGCGACAGCGGCGTGGGATCTGCCTCTCTGCGAGCAGCCG---GGAGCGGCGGC---GGCGGCGCCAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4473400 72 - 13342542 GTGCGGAGCGGGCGACAGCGGCGTGGGATCTGCCTCTCTGCGAGCAGCCG---GGAGCGGCGGC---GGCGGCGCCAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5403895 72 + 7714307 GTGCGGAGCGGGCGACAGCGGCGTGGGATCTGCCTCTCTGCGAGCAGCCG---GGAGCGGCGGC---GGCGGCGCCAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29211714 72 + 50890351 GTGCGGAGCGGGCGACAGCGGCGTGGGATCTGCCTCTCTGCGAGCAGCCG---GGAGCGGCGGC---GGCGGCGCCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28501995 75 + 49145316 GTGCGGAGCGGGCGACAGCGGCGTGGGATCTGCCTCTCTGCGAgcgggcccgggaggcggcggc---ggcggcgccAT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1556999 72 - 2680843 GTGCGGAGCGGGCGACAGCGGCGTGGGATCTGCCTCTCTGCGAGCGGCCC---GGGGCGGCGGC---GGCGGCGCCAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 306776 70 - 4471408 GTGCGGAGCGGGCGACAGCGGCGTGGGATCTGC--CTCTGCGAGCGGCCC---GGGGCGGCGGC---GGCGGCGCCAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3918642 74 - 30143674 GCGCGGAGC-GGCGACAGCGGCGCGGAATCTGCCTCTCTGCGAGCGGCCC---GGAGCGGCGGCGGCGGCGGCGCCAT i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5419602 74 + 5549422 GTGCGGAAC-GGCGACAGCGGCGTGGGATCTGCCTCTCTGCGAGCGGCCC---GGAGCGGCGGCGGTGGCGGCGCCAT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111051915 68 - 145441459 gggcggagc-ggcgggcgCAGCGCGGGATCTGACTGAGTGCGAGCGGCGG------GCGACGGC---GGCGGCGCCAT i mm10.chr7 C 0 C 0 s dasNov3.JH563638 268478 71 + 643850 GTGCGGAGCGGG-GACGGCGGCGTAGGATCTGCCTCTCTGCGAGCGGGCC---CGAGCGGCGGC---GGCGGCGCCAT i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4561693 836 - 122678785 M e saiBol1.JH378197 5344150 564 + 8899380 M e colAng1.NW_012111697v1 2270176 464 + 4274983 I e manLeu1.NW_012102454v1 824958 673 - 2385121 I a score=233359.000000 s hg38.chr19_GL383574v1_alt 20385 16 + 155864 GAGCGGGGG-CACCCCT s panTro5.chr19 36079237 16 + 61309027 GAGCGGGGG-CACCCCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39831216 16 + 64411610 GAGCGGGGG-CACCCCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6248967 16 - 8369475 GAGCGGGGG-CACCCCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63843966 16 - 106955855 GAGCGGGGG-CACCCCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30152217 16 + 53671032 GAGCGGGGG-CACCCCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34605080 16 + 59248254 GAGCGGGGG-CACCCCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4473472 16 - 13342542 GAGCGGGGG-CACCCCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5403967 16 + 7714307 GAGCGGGGG-CACCCCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29211786 16 + 50890351 GAGCGGGGG-CACCCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28502070 17 + 49145316 GAGCGGGGGTCACCCCT i calJac3.chr22 C 0 I 205 s saiBol1.JH378197 5344716 16 + 8899380 GAGCGGGGG-CACCCCT i saiBol1.JH378197 M 564 C 0 s cebCap1.NW_016107633v1 1557071 16 - 2680843 GAGCGGGGG-CACCCCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 306846 16 - 4471408 GAGCGGGGG-CACCCCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3918716 16 - 30143674 GAGCGGGGG-CACCCCT i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5419676 16 + 5549422 GAGCGGGGG-CACCCCT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111051983 16 - 145441459 GAGCGGGGG-CACCCCT i mm10.chr7 C 0 C 0 s dasNov3.JH563638 268549 16 + 643850 GAGCGGGGG-CACCCCT i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4561693 836 - 122678785 M e colAng1.NW_012111697v1 2270176 464 + 4274983 I e manLeu1.NW_012102454v1 824958 673 - 2385121 I a score=13923.000000 s hg38.chr19_GL383574v1_alt 20401 1 + 155864 T s panTro5.chr19 36079253 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39831232 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6248983 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63843982 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30152233 1 + 53671032 T i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34605096 1 + 59248254 T i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4473488 1 - 13342542 T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5403983 1 + 7714307 T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29211802 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28502292 1 + 49145316 T i calJac3.chr22 I 205 C 0 s saiBol1.JH378197 5344732 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1557087 1 - 2680843 T i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 306862 1 - 4471408 T i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3918732 1 - 30143674 T i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5419692 1 + 5549422 T i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111051999 1 - 145441459 T i mm10.chr7 C 0 C 0 s dasNov3.JH563638 268565 1 + 643850 T i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4561693 836 - 122678785 M e colAng1.NW_012111697v1 2270176 464 + 4274983 I e manLeu1.NW_012102454v1 824958 673 - 2385121 I a score=2130902.000000 s hg38.chr19_GL383574v1_alt 20402 145 + 155864 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAAAACT-CCACCGTAGCCCTTGCCAAAGGTACGCGGGACCGGGCCTCAGGG-T----GG-----G-GGC-CGAGCCGGGCGCC s panTro5.chr19 36079254 145 + 61309027 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAAAACT-CCACCGTAGCCCTTGCCAAAGGTACGcgggaccgggcctcaggg-t----gg-----g-ggc-cgggccgggcgcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39831233 144 + 64411610 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAAAACT-CCACCGTAGCCCTTGCCAAAGGTACGCGGGACCGGGCCTCAGGG-T-----G-----G-GGC-CGGGCCGGGCGCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6248984 150 - 8369475 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAAAACT-CCACCGTAGCCCTTGCCAAAGGTACGCGGGACCGGGCCTCAGGG-T----GGGGGCCG-GGC-CGGGCCGGGCGCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63843983 145 - 106955855 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAAAACT-CCACCGTAGCCCTTGCCAAAGGTACGcgggaccgggcctcaggg-t----gg-----g-ggc-cgggccgggcgcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30152234 145 + 53671032 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAAAACT-CCACCGTAGCCCTTGCCAAAGGTACGcgggaccgggcctcgggg-t----gg-----g-ggc-cgggccgggcgcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34605097 145 + 59248254 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAAAACT-CCACCGTAGCCCTTGCCAAAGGTACGcgggaccgggcctcgggg-t----gg-----g-ggc-cgggccgggcgcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4473489 145 - 13342542 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAAAACT-CCACCGTAGCCCTTGCCAAAGGTACGcgggaccgggcctcgggg-t----gg-----g-ggc-cgggccgggcgcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5403984 145 + 7714307 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAAAACT-CCACCGTAGCCCTTGCCAAAGGTACGcgggaccgggcctcgggg-t----gg-----g-ggc-cgggccgggcgcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29211803 145 + 50890351 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAAAACT-CCACCGTAGCCCTTGCCAAAGGTACGcgggaccgggcctcgggg-t----gg-----g-ggc-cgggccgggcgcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28502293 147 + 49145316 ACATCGGCAGCAAGATAAGCCTCATCTCCCAAGGCAGAGATCCGGTACGAGGGCATCCTCTACACCATCGACACCGAAAACTCCCCCCGTAGCCCTCGCCAAAGGTACGTGGGACCGGGCCTCGGGG-T----GG-----G-GGT-CGGACCGGGCGCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5344733 145 + 8899380 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAAAACT-CCACCGTAGCCCTCGCCAAAGGTACGTGGGACCGGGCCTCGGGG-T----GG-----G-GGC-CGGACCGGGCGCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1557088 145 - 2680843 ACATTGGCAGCAAGATCAGCCTCATTT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAAAACT-CCACCGTAGCCCTCGCCAAAGGTACGTGAGACCCGGCCTCGGGG-T----GG-----G-GGC-CGGGccgggcgcc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 306863 145 - 4471408 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAAAACT-CCACCGTAGCCCTCGCCAAAGGTACGTGGGACCGGGCCTCGGGG-T----GG-----G-GGC-CGGACCGAGCGCC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3918733 146 - 30143674 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAGAACT-CCACCGTAGCCCTCGCCAAAGGTACGCCGCGGCGGGCCTCGGGGCT----GC-----G-GGC-CGGGCCGGGCGCC i micMur3.chr22 C 0 I 1 s proCoq1.NW_012149263v1 516150 146 + 2501019 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAGAACT-CCACCGTAGCCCTCGCCAAAGGTACGCTGGGGCGGGCCTCGGGGTT----GC-----G-GGC-CGGGCCGGGCGCC i proCoq1.NW_012149263v1 N 0 I 1 s otoGar3.GL873654 5419693 146 + 5549422 ACATCGGTAGCAAGATCAGCCTCATCT-CCAAGGCCGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAGAACT-CCACCGTAGCCCTCGCCAAAGGTACGAGCGGGCGGGCCTAGGGGCT----gc-----g-ggc-cgggccgcgcgcc i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111052000 149 - 145441459 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAGGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAGAACT-CCACGGTAGCCCTCGCCAAAGGTACGGCGGGGCGGGCCTCGGGG-TTTTGGG-----G-GGCGCGGGTAGAGCGC- i mm10.chr7 C 0 C 0 s dasNov3.JH563638 268566 146 + 643850 ACATCGGCAGCAAGATCAGCCTCATCT-CCAAAGCGGAGATCCGCTACGAGGGCATCCTCTACACCATCGACACCGAGAACT-CCACCGTAGCTCTCGCCAAAGGTTCGCTGGGGTGGGCCTCGGGG-T----GG-----GAGGC-CGGGCCTGGCATC i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4561693 836 - 122678785 M e colAng1.NW_012111697v1 2270176 464 + 4274983 I e manLeu1.NW_012102454v1 824958 673 - 2385121 I a score=1496907.000000 s hg38.chr19_GL383574v1_alt 20547 127 + 155864 GCTCGGGGCTGCTCCCCGCTCCGGCCCGCGGCCTC----CTCGTTCCCTCCCCTCCCTCCGTCGAGCTCCGGGAGG-------CCTCTCGC-CTCCCTTCTCCG--------------GGCCCC--GGCGTCGCGGGCCGGACCGCGGCCTCCCC s panTro5.chr19 36079399 127 + 61309027 gCTCGGGGCTGCTCCCCGCTCCGGCCCGCAGCCTC----CTCGTTCCCTCCCCTCCCTCCGTCGAGCTCCGGGAGG-------CCTCTCGC-TTCCCTTCTCCG--------------GGCCCC--GGCGTCGCGGGCCGGACCGCGGCCTCCCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39831377 127 + 64411610 GCTCGGGGCTGCTCCCCGCTCCGGCCCGCAGCCTC----CTCGTTCCCTCCCCTCCCTCCGTCGAGCTCCGGGAGG-------CCTCTCGC-CTCCCTTCTCCG--------------GGCCCC--GGCGTCGCGGGCCGGACCGCGGCCTCCCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6249134 127 - 8369475 GCTCGGGGCTGCTCCCCGCTCCGGCCCGCGGCCTC----CTCGTTCCCTCCCCTCCCTCCGTCGAGCTCCGGGAGG-------CCTCTCGC-CTCCCTTCTCCG--------------GGCCCC--GGCGTCGCGGGCCGGACCGCGGCCTCCCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63844128 115 - 106955855 gCTCGGGGCTGCTCCCCACTCCGGCCC-CGGCCTT----CTCGTTCCCTCCCCTCCCTCCGTCGAGCTCCGGGAGG-------CCTCTCCC-CTCCCTTCTCCG--------------GGCCCC--GGCGTCGCGGGCCGGA-----------CC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30152379 134 + 53671032 gCTCGGGGCTGCTCCCCGCTCCGGCCCGTGGCCTC----CTCGTTCCCTTCCCTCCCTCCGTCGAGCTCCGGCAGGCCTTTCCCCTCTCCC-CTCCCTTCTCCG--------------GGCCAC--GGCGTCGCGGGCCGGACCGCGGCCTTCCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34605242 134 + 59248254 gCTCGGGGCTGCTCCCCGCTCCGGCCCGTGGCCTC----CTCGTTCCCTTCCCTCCCTCCGTCGAGCTCCGGCAGGCCTTTCCCCTCTCCC-CTCCCTTCTCCG--------------GGCCCC--GGCGTCGCGGGCCGGACCGCGGCCTTCCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4473634 134 - 13342542 gCTCGGGGCTGCTCCCCGCTCCGGCCCGTGGCCTC----CTCGTTCCCTTCCCTCCCTCCGTCGAGCTCCGGCAGGCCTTTCCCCTCTCCC-CTCCCTTCTCCG--------------GGCCCC--GGCGTCGCGGGCCGGACCGCGGCCTCCCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5404129 134 + 7714307 gCTCGGGGCTGCTCCCCGCTCCGGCCCGTGGCCTC----CTCGTTCCCTTCCCTCCCTCCGTCGAGCTCCGGCAGGCCTTTCCCCTCTCCC-CTCCCTTCTCCG--------------GGCCCC--GGCGTCGCGGGCCGGACCGCGGCCTCCCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29211948 134 + 50890351 gCTCGGGGCTGCTCCCCGCTCCGGCCCGCGGCCTC----CTCGTTCCCTTCCCTCCCTCCGTCGAGCTCCGGCAGGCCTTTCCCCTCTCCC-CTCCCTTCTGCG--------------GGCCCC--GGCGTCGCGGGCCGGACCGCGGCCTCCCC i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2270640 133 + 4274983 GCTCGGGGCTGCTCCCCGCTCCAGCCCGCGGCCTC----CTCGTTCCCTTCCCTCCCTCCGTCGAGCTCCGGCAGGCCTCTCCCCTCTCCC-CTCCCTTCTCCG--------------GGCCCC--GGCGTCGCGGGCCGGACCGCGGCCTCCC- i colAng1.NW_012111697v1 I 464 C 0 s calJac3.chr22 28502440 131 + 49145316 ACTCAAGGCTGCTCCCCGCTCCGGCCCTCAGCCTCCTGGCTCGCTCCTTCCCCTCCCTCCGTGGAGCTCCGGGAGG-------CCGCTCCC-CTCCATTCTCCG--------------GGCCCT--GGCGTCGCGGGCCGGACCGCGGCCTCCCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5344878 127 + 8899380 GCTCAGGGCTGCTCCCCGCTCCGGCCCTCAGCCTC----CTCGCCCCTTCCCCTCCCTCCGTGGAGCTCCGGGAGG-------CCGCTCCC-CTCCCTTCTCCG--------------GGCCCT--GGCGTCGCGGGCCAGACCGCGGCCTCCCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1557233 127 - 2680843 gctcagggctgctccccgctccggccctcagcctc----ctcgctccTTCCCCTTCCTCCGTGGAGCTCCGGGAGG-------CCGCTCCC-CTCCCTTCTCCG--------------GGGCCT--GGCTTTGCGGGCCGGACCGCGGCCTCCCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 307008 125 - 4471408 GCTCAGGGCTgctccccgctccggccctcagcctc----ctcgctccttctcctccctccGTGGAGCTCCGGGAGG-------CCGCTCCC-CTCCCTTCTCCC--------------GACCCT--GGCGTCGCGGGCCGGACCGCGGCCTCC-- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3918880 123 - 30143674 GCTCCGAGCCGCTCCCGCTCTCGGCCCGCGGCCTC----CTCGCTCCCGCCCGGCCCTCCGTCGCGCTCGGGGAGG-------CCGCTCCC-CTCCTTCC------------------TGCCCC--GGCGTCGCGGGCCGGGCCGCGGCCTCCCC i micMur3.chr22 I 1 C 0 s proCoq1.NW_012149263v1 516297 123 + 2501019 GCTCGGAGCCGTTCCGACTCTCGCCTCGCGGCCTC----CTCGCTCTCTCCCCTCTCTCCGTCGTGCTCCGGGAGG-------CCGCTCCC-CTCCCTCC------------------CGCCTC--GGCGTCGCGGGCCGGGCCGCGGCCTCCCC i proCoq1.NW_012149263v1 I 1 C 0 s otoGar3.GL873654 5419840 139 + 5549422 gcTCGGAGCTGCTGCA--CCTCGGCCCGCGGCGGC----CTC-CTCCCCTCCCTCCCTCCGTCGTCCTCGGGGAGG-------CCGCTcccgccccgtcccgcccggcctccccgaggcgcccc--ggcttcgcgggccgggccccggccTCCCC i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111052149 93 - 145441459 ------------------------CCCGCCGCCCT----CGCGCTCTT----CTCCCTCTGCGGTCCTC--ACGGG-------CCTCGCTC-C------CTCCC--------------GGCCCCCAAGCGACAAGGGCCGGGCTGCGGCCTCCCC i mm10.chr7 C 0 C 0 s dasNov3.JH563638 268712 113 + 643850 -CGCGG---------CCCCTTCGTTCCGCCTCCCC----TTCGTTCCG---CCCCACTCCGTCTCCCTCTCGGAGG-------CCTCTCCC-TTCCCTTTCCC---------------GGTTGG--GGCATCGCGGGCCGGGCTGCGGCCTCCTC i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4561693 836 - 122678785 M e manLeu1.NW_012102454v1 824958 673 - 2385121 I a score=2327121.000000 s hg38.chr19_GL383574v1_alt 20674 174 + 155864 GCGGCTCCCTG----GTTTCCG-CCCCCCGGAATGTCCGCGCCTGAAGCCCGGGGAACTACGGGACTGAGTGCGC-------------G----GC----GGGCG----GCCCTGAAGTC-CGAGAACGGGCCGGAGAACACG--GAGAAACGCGTCTTCCAACTCCGAAATTCGGGGCTTCTGCCGTC-TTAGCACAAAACAAAGCCG s panTro5.chr19 36079526 146 + 61309027 GCGGCTCCCTG----GCTTCCG-CCCCCCGGAATGTCCGCGCCTGAAGCCCGGGGAACTACGGGACTGAGTGCGC-------------G----GC----GGGCG----GCCCTGAAGT-------------------------------ACGCGTCTTCCAACTCCGAAATTCGGGGCTTCTGCCGTC-TTAGCACAAAACAAAGCCG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39831504 146 + 64411610 GCGGCTCCCTG----GCTTCCG-CCCCCCGGAATGTCCGCGCCTGAAGCCCGGGGAACTACGGGACTGAGTGCGC-------------G----GC----GGGCG----GCCCTGAAGT-------------------------------ACGCGTCTTCCAACTCCGAAATTCGGGGCTTCTGCCGTC-TTAGCACAAAACAAAGCCG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6249261 174 - 8369475 GCGGCTCCCTG----GCTTCCG-CCCCCCGGAATGTCCGCGCCTGAAGCCCGGGGAACTACGGGACTGAGTGCGC-------------G----GC----GGGCG----GCCCTGAAGTC-CGAGAACGGTCCGGAGAACACG--GAGAAACGCGTCTTCCAACTCCGAAATTCGGGGCTTCTGCCGTC-TTAGCACAAAACAAAGCCG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63844243 184 - 106955855 GCGGCTCCCTG----GCTTCCGCCCCCCCGGAAGGTCCGCGCCTGAAGCCCGGGGAACTACGGGACTGAGTGCGCGGCGGGC-----GG----GC----GGGCG----GCCCTGAAGTC-CGAGAACGGGCCGGAGAACACG--GAGAAACGTGTCTTCCAACTCCGAAATTCGGGGCTTCTGTCGTCTTTAGCACAAAACAAAGCCG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30152513 179 + 53671032 GCGGCTCCCTG----GCTTCCGCCCCCCTGGAAGGTCCGCGCCTGAAGCCCAGGGAACTACGGGACTGAGTGCGC----GGC-----GG----GC----GGGCG----GCCCTGAAGTC-CGAGAACGGGCTGGAGAACACG--GAGAAACGCGTCTTCCAACTCCGAAATTCGGGGCTTCTGTCGTC-TTAGCACAAAACAAAGCCG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34605376 179 + 59248254 GCGGCTCCCTG----GCTTCCGCCCCCCTGGAAGGTCCGCGCCTGAAGCCCAGGGAACTACGGGACTGAGTGCGC----GGC-----GG----GC----GGGCG----GCCCTGAAGTC-CGAGAACGGGCTGGAGAACTCG--GAGAAACGCGTCTTCCAACTCCGAAATTCGGGGCTTCTGTCGTC-TTAGCACAAAACAAAGCCG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4473768 179 - 13342542 GCGGCTCCCTG----GCTTCCGCCCCCCTGGAAGGTCCGCGCCTGAAGCCCAGGGAACTACGGGACTGAGTGCGC----GGC-----GG----GC----GGGCG----GCCCTGAAGTC-CGAGAACGGGCTGGAGAACACG--GAGAAACGCGTCTTCCAACTCCGAAATTCGGGGCTTCTGTCGTC-TTAGCACAAAACAAAGCCG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5404263 179 + 7714307 GCGGCTCCCTG----GCTTCCGCCCCCCTGGAAGGTCCGCGCCTGAAGCCCGGGGAACTACGGGACTGAGTGCGC----GGC-----GG----GC----GGGCG----GCCCTGAAGTC-CGAGAACGGGCTGGAGAACACG--GAGAAACGCGTCTTCCAACTCCGAAATTCGGGGCTTCTGTCGTC-TTAGCACAAAACAAAGCCG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29212082 179 + 50890351 GCGGCTCCCTG----GCTTCCGCCCCCCTGGAAGGTCCGCGCCTGAAGCCCGGGGAACTACGGGACTGAGTGCGC----GGC-----GG----GC----GGGCG----GCCCTGAAGTC-CGAGAACGGGCTGGAGAACACG--GAGAAACGCGTCTTCCAACTCCGAAATTCGGGGCTTCTGTCGTC-TTAGCACAAAACAAAGCCG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 825631 179 - 2385121 gcGGCTCCCTG----GCTTCCGCCCCCCTGGAAGGTCCGCGCCTGAAGCCCGGGGAGCTACGGGACTGAGTGCGC----GGC-----GG----GC----GGGCG----GCCCTGAAGTC-CGAGAACGGGCTGGAGAACACG--GAGAAACGCGTCTTCCAACTCCGAAATTCGGGGCTTCTGCCGTC-TTAGCACAAAACAAAGCCG i manLeu1.NW_012102454v1 I 673 C 0 s colAng1.NW_012111697v1 2270773 168 + 4274983 GCGGCTCCCTG----GCTTCCGCCCCCCTGGAAGGTCCGCGCCTGAAGCCCGGGGAACTACGGGACTGAGTGC----------------------------GCG----GCCCTGAAGTC-CGAGAACGGGCTGGAGCACACG--GAGAAACGCGTCTTCCAACTCCGAAATTCGGGGCTTCTGTCGTC-TTAGCACAAAACAAAGCCG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28502571 187 + 49145316 GCGTCTCCCTG----GCTTCCGCCCCCCAGGAAGGTCCGCGCCTGAAGCACGGGGAACTACGGGACTGAGTgcgcggcgggc-----gggcgtgc----gggcg----gcccTGAAGTC-CGACAACGGGCGGGAGAACACG--GAGAAACGGGTCTTCCAACTCCGAGATTCGGGAGTTCTGTTGTC-TTAGCACAAAACAAAGCCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5345005 184 + 8899380 GCGTCTCCCTG----GCTTCCGCCCCCCAGGAAGGTCCGCGCCTGGAGCCCGGGGAACTACGGGACTGAGTgcgcggcgggc-----gg----gc----gggcg----gcccTGAAGTCGGGACAACGGGCGGGAGAACACG--GAGAAACGCGTCTTCCAACTCCGAAATTCGGGGGTTCTGTCGTG-TTAGCACAAAACAAAGCCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1557360 183 - 2680843 GCGTTTCCCTG----GCTTCCGCCCCCCAGGAGGGTCCGCGCCTGAAGCCCGGGGAACTACGGGACTGAGTGCGCGGCGGGC-----GG----GC----GAGCG----GCCCTGAAGTC-CGACAACGGGCGGGAGAACACG--GAGAAACGCGTCTTCCAACTCCGAAATTCGGGGGTTCTGTCGTC-TTAGCACAAAACAAAGCCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 307133 177 - 4471408 ------CCCTG----GCTTCCGCCCCCCAGGAGGGTCCGCGCCTGAAGCCCGGGGAACTACGGCACTGAGTGCGCGGCGGGC-----GG----GC----GGGCG----GCCCTGGAGTC-CGACAACGGGCGGGAGAACACG--GAGAAACGCGTCTTCCAACTCCGAAATTCGGGGGTTCTGTCGTC-TTAGCACAAAACAAAGCCC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3919003 183 - 30143674 GGGGCTTCCTG----GCTCCCGCCGC----GAAGGTCTGCGCCCGAGGTCCGGGGAAGTAGgggccggggtgcgc----ggc-----gg----gcgggcgggcggCCCGCCCTCAAGTC-CGAGAACGGGCCGGAGAACACG--GAGGTACGCGTCTTCCAACTCCGAAATTCGGTGGTTCGGTCGCC-TCGCCACAAAACAAAGCCG i micMur3.chr22 C 0 I 124 s proCoq1.NW_012149263v1 516420 175 + 2501019 CGGGCTTCCTG----GCGCCCGTCCC----GAAGGTCTGCGCCCTAAATCTGGGGAACTACGGGACGGAGTGCGC----GGC-----GG----ACG---GGGCG----GCCCTCAAGTC-CGAGAACGGGCCGGAGAACACG--GAGATACGTGTCTTCCAACTCCGAAATTCGGTGGTTCTGTCGCC-TTGCCACAAAACAAAGCC- i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5419979 154 + 5549422 GAGGCTCCCCG----GCGTCC--------------------------ATCTGGGGACCTACGGGACGGAGTgcgc----ggc-----gg----gcg---gggcg----ccccgcAAGTC-CGAGAACGGGCCGGAGAACACG--GAGATACGTGTCTTCCGACTCTGAAATTCGGCGGTTCTGTTGTG-TGCCCACTAAACAAAGCCG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111052242 182 - 145441459 -GGGCTCCCCGGGCTGCTTCCTTTCCCCC-GAAGCTCCGCGCCTTCCATCCGGGGAAC---------GAGTgcgc----ggcgcccggg----gcg---gggcg----ATGCTAAAGTCCCGGGAACCAGCCGGAGAACACACCCAGGTTCGCGGCTTCCAAGACCGAAATTCGGTCGTTCCTTCTTCGGAAGCGCCGAACAAAGCCG i mm10.chr7 C 0 C 0 s dasNov3.JH563638 268825 175 + 643850 GCGGCTTCTCG----GCGACCG----CTCGGCAGGTCCGCGCCTTCAATCCGGGGAACTCCAGGGCCGAG-GCTG----GGC-----GG----GCG---GGGCG----TCCCGTAAGTC-CGAGAACCGGCCGGAGAACACC--GAGATGCGTGTCTTCCAACTCCGAAATTCGGTGGTTCTGTCCTC-TTAACACAAAACAAAGGCA i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4561693 836 - 122678785 M a score=1639373.000000 s hg38.chr19_GL383574v1_alt 20848 120 + 155864 GAGTATTCAAAGAATTTTTCCGCCCAGCTTGAGTTCATCGCGGATGCGTTGACTACAC-AGCACCCATTTTCTCA-CTTTGTTCATTTCAATTCGTGGCGATCTTCCTCTGGTGAACTCTTG s panTro5.chr19 36079672 120 + 61309027 GAGTATTCAAAGAATTTTTCCGCCCAGCTTGAGTTCATCGCGGATGCGTTGACTACAC-AGCACCCATTTTCTCA-CTTTGTTCATTTCAATTCGTGGCGATCTTCCTCTGGTGAACTCTTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39831650 120 + 64411610 GAGTATTCAAAGAATTTTTCCGCCCAGCTTGAGTTCATCGCGGATGCGTTGACTACAC-AGCACCCATTTTCTCA-CTTTGTTCATTTCAATTCGTGGCGATCTTCCTCTGGTGAACTCTTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6249435 120 - 8369475 GAGTATTCAAAGAATTTTTCCGCCCAGCTTGAGTTCATCGCGGATGCGTTGACTACAC-AGCACCCATTTTCTCA-CTTTGTTCATTTCAATTCGTGGTGATCTTCCTCTGTTGAACTCTTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63844427 120 - 106955855 GAGTATTCAAAGAATTTTTCCGCCCAGCTTGAGTTCATCGCGGATGCGTTGACTACAC-AGCACCCATTTTCTCA-CTTTGTTCATTTCAATTCGTGGCGATCTTCCTCTAGTGAACTCTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30152692 119 + 53671032 GAGTATTCAAAGAATTTTTCCGCCCAGCTTGAGTTCATCGCGGATGCATTGACTACAC-AGCACCCATTTTCTCA-CTTTGTTCATTTCAATTCGTGGCAATCTTCCTCTGGTGAACTC-TG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34605555 119 + 59248254 GAGTATTCAAAGAATTTTTCCGCCCAGCTTGAGTTCATCGCGGATGCATTGACTACAC-AGCACCCATTTTCTCA-CTTTGTTCATTTCAATTCGTGGCAATCTTCCTCTGGTGAACTC-TG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4473947 119 - 13342542 GAGTATTCAAAGAATTTTTCCGCCCAGCTTGAGTTCATCGCGGATGCATTGACTACAC-AGCACCCATTTTCTCA-CTTTGTTCATTTCAATTCGTGGCAATCTTCCTCTGGTGAACTC-TG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5404442 119 + 7714307 GAGTATTCAAAGAATTTTTCCGCCCAGCTTGAGTTCATCGCGGATGCATTGACTACAC-AGCACCCATTTTCTCA-CTTTGTTCATTTCAATTCGTGGCAATCTTCCTCTGGTGAACTC-TG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29212261 119 + 50890351 GAGTATTCAAAGAATTTTTCCGCCCAGCTTGAGTTCATCGCGGATGCATTGACTACAC-AGCACCCATTTTCTCA-CTTTGTTCATTTCAATTCGTGGCAATCTTCCTCTGGTGAACTC-TG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 825810 119 - 2385121 GAGTATTCAAAGAATTTTTCCGCCCAGCTTGAGTTCATCGCGGATGCATTGACTACAC-AGCACCCATTTTCTCA-CTTTGTTCATTTCAATTCGTGGCAATCTTCCTCTGGTGAACTC-TG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2270941 119 + 4274983 GAGTATTCAAAGAATTTTTCCGCCCAGCTTGAGTTCATCGCGGATGCGTTGACTACAC-AGCACCCATTTTCTCA-CTTTGTTCATTTCAATTCGTGGCAGTCTTCCTCTGGTGAACTC-TG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28502758 119 + 49145316 GAGTATTCAAAGAATTTTTTCGCCCAGCTTGAGTTCATCGTGGATGCGTTGACTCCAC-AGCACCCATTTTCTCA-CTTTATTCATTTCTGTTCGTGGCGATCTTCCTCAGGAGAACTC-TG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5345189 119 + 8899380 GAGTATTCAAAGAATTTTTCCGCCCAGCTTGAGTTCATCGTGGATGCGTTGACTCCAC-AGCACCCATTTTCTCA-CTTTGTTCATTTCTGTTCGTGGCGGTCTTCCTCGGGTGAACTC-TG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1557543 119 - 2680843 GAGTATTCAAAGAATTTTTCCGCCCAGCTTGAGTTCATTGTGGATGCGTTGACTCCAC-AGCACCCATTTTCTCA-CTTTGCTCATTTCTATTCGTGGCGATCTTCCTCAGGTGAACTC-TG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 307310 119 - 4471408 GAGTATTCAAAGAATTTTTCCTCTCAGCTTGAGTTCATCGTGGATGCGTTGACTCCAC-AACACCCATTTTCTCA-CTTCGTTCATTTCTATTCTTGGCGATCTTCCTCAGGTGAACTC-TG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 516595 119 + 2501019 GAGTATTCAAAGCATTTTTCTGCCTAGCTTGAGTTTAGTGCTGATTTGTTGATTCCGT-AGCACCCATTTTCTCA-AATTCCTCATTTCAGCCCGTTGCGATATTCCTCAGGTGAGCTC-TA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5420133 119 + 5549422 GAGTATTCAAAGAATTTTTCCGCCTAGCTTGAGTTTAGGGCTGATTAGTCGATTCCAT-AGCACCCGTTTGCTCA-CAATACCAATTTCAGCTCGTCGCGATATTCCGCAGGTGAGCCA-CA i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111052424 122 - 145441459 GAGGAGTCGAAGAATCTTGACGCCTACCTCGAGATGAATGCGGATGTGTTGATTCCTCGGGCACCCATTTTCTCAGCGTTCTTCGTCTGGGTCGGTGGCGACGGTTGTCGAGTGAACTCCTA i mm10.chr7 C 0 C 0 s dasNov3.JH563638 269000 118 + 643850 GCGCATTCAAAGAATTTTTCCACTTAGCTGGAGTTTAGTGTTGATGTATTGATTCCAC-AGGACCCATTTTTTCA-CATTCATAATTTCAGTTTGTTGAGATATTCCTCAGGTGAACTC-T- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3919186 124 - 30143674 I e canFam3.chr1 4561693 836 - 122678785 M a score=2035379.000000 s hg38.chr19_GL383574v1_alt 20968 130 + 155864 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-GACGCAGACAT----TCTCGAAATGCCATCG-ATGCCGTGGAGCAGATCCCATCTCCCTCGGCTCATCCTCTGTTGGTATTTACCTGTTAAACCGGAATCCTC--- s panTro5.chr19 36079792 130 + 61309027 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-GACGCAGACAT----TCTCGAAATGCCATCG-ATGCCGTGGAGCAGATCCCATCTCCCTCGGCTCATCCTCTGTTGGTATTTACCTGTTAAACCGGAATCCTC--- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39831770 130 + 64411610 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-GACGCAGACAT----TCTCGAAATGCCATCG-ATGCCGTGGAGCAGATCCCATCTCCCTCGGCTCATCCTCTGTTGGTATTTACCTGTTAAACCGGAATCCTC--- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6249555 130 - 8369475 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-GACGCAGACAT----TCTCGAAATGCCATCG-ATGCCGTGGAGCAGATCCCATCTCCCTCGGCTCATCCTCTGTTGGTATTTACCTGTTAAACCGGAATCCTC--- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63844547 130 - 106955855 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-GACGCAGACAT----TCTCGAAATGCCATCG-ATGCCGTGGAGCAGATCCCATCTCCCTCGGCTCATCCTCTGTTGGTATTTACCTGTTAAACCGGAATCCTC--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30152811 130 + 53671032 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-GACGCAGACAT----TCTCGAAATGCCATCG-ATGCCGTGGAGCAGATCCCATCTCCCTCGGCTCATTCTCTGTTGGTATTTACCTGTTAAACCGGAATCCTC--- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34605674 130 + 59248254 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-GACGCAGACAT----TCTCGAAATGCCATCG-ATGCCGTGGAGCAGATCCCATCTCCCTCGGCTCATTCTCTGTTGGTATTTACCTGTTAAACCGGAATCCTC--- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4474066 130 - 13342542 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-GACGCAGACAT----TCTCGAAATGCCATCG-ATGCCGTGGAGCAGATCCCATCTCCCTCGGCTCATTCTCTGTTGGTATTTACCTGTTAAACCGGAATCCTC--- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5404561 130 + 7714307 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-GACGCAGACAT----TCTCGAAATGCCATCG-ATGCCGTGGAGCAGATCCCATCTCCTTCGGCTCATTCTCTGTTGGTATTTACCTGTTAAACCGGAATCCTC--- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29212380 130 + 50890351 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-GACGCAGACAT----TCTCGAAATGCCATCG-ATGCCGTGGAGCAGATCCCATCTCCCTCGGCTCATTCTCTGTTGGTATTTACCTGTTAAACCGGAATCCTC--- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 825929 130 - 2385121 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-GACGCAGACAT----TCTCGAAATGCCATCG-ATGCCGTGGAGCAGATCCCATCTCCTTCGGCTCGTTCTCTGTTGGTATTTACCTGTTAAACCGGAATCCTC--- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2271060 129 + 4274983 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-TACGCAGACAT----TCTCGAAATGCCATCG-ATGCCGTGGAGCAGAT-CCATCTCCCTCGGCTCATTCTCTGTTGGTATTTACCTGTTAAACCGGAATCCTC--- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28502877 130 + 49145316 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-GACGCAGACAT----TTTCGAAATGCCATCG-GTGCAGTGGAGCAGATCCCATCTCCCTCGGCTCATCCTCTGTTGGTATTTACCTGTTAAACCGGAATTCTC--- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5345308 130 + 8899380 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-GACGCAGACAT----TCTCGAAATGCCATCG-GTGCCGTGGAGCAGATCCCATCTCCCTCGGCTCATCCTCTGTCGGTATTTACCTGTTAAACCGGAATTCTG--- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1557662 130 - 2680843 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-GACGCAGACAT----TCTCGAAATGCCATCG-GTGCCGTGGAGCAGATCCCATCTCCCTCGGCTCATCCTCTGTTGGCATTTACCTGTTAAACCGGAATTCTC--- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 307429 130 - 4471408 AGTAATGTGCT-AAAACTTTGGGTTTGCTCTGC-GACGCAGACAT----TCTCGAAATGCCATCG-GTGCCGTGGAGCAGATCCCATCTCCCTCGGCTCATCCTCTGTTGGTATTTACCTGTTAAACCGGAATTCTC--- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3919310 126 - 30143674 AGTAATGTGCT-GAAACTTTGGGATTGCTCCGC-AACGCAGACAT----TCTCGAAATGCCGCCG-GTACCCTGGGGCAGATCGCCTCTCGCTTGGCTCCTC----GGTGGCATTTACCTGTTAGACCGGAGTCCTC--- i micMur3.chr22 I 124 I 250 s proCoq1.NW_012149263v1 516714 126 + 2501019 AGTAATGTGCT-AAAACTTTGGGTTTGCTCCGC-AACGCAAACAT----TCTCGAAATGCCGTCG-GTACCATGGAGCAGATCACCTCTCACTTGGTTCATC----GGTGGTATTGACCTGTTAAACCGGAATCCTT--- i proCoq1.NW_012149263v1 C 0 I 3 s otoGar3.GL873654 5420253 123 + 5549422 GTTAAATTGCT-AAAACTTTGGGTTCGCTGTGCAAATGCAAACAT----TCTCGAAATGCCGTCG-ATACCGTCGAGCAGATCCCCT----CTTGTCTCATC----TGTGGTATTTACCTGTTAAACCGGAATCCTT--- i otoGar3.GL873654 I 1 I 3 s mm10.chr7 111052546 125 - 145441459 AGGAGTGTGCTCCAAACTTTGGGTTTGC------GCCGCAGACTTGTGATCTCGAAAGGCCGTTTCGTACCGTCCAGTCGATCGCATCCCGTTTGTCTCCTC----TGTGATTGTTACCTGTTATGCCGGAATTC----- i mm10.chr7 C 0 C 0 s dasNov3.JH563638 269118 129 + 643850 AGTAGCCTGCC-AAAACTTTGGGTTTGCTCTGC-GGCACAGACGG----TCTCAAAATGCCATTC-GTACCATCGAGCAGATCACATCCCACTTGTCTCAGA----TGTATTATTTACCTGTTAAACCGGAATCCTTTTC i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4561693 836 - 122678785 M a score=477723.000000 s hg38.chr19_GL383574v1_alt 21098 38 + 155864 AAAGCCTGTTGTGCAACCACC-TCATTAGGGCGCGTGGT s panTro5.chr19 36079922 38 + 61309027 AAAGCCTGTTGTGCAACCCTC-TCATTAGGGCGCGTGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39831900 38 + 64411610 AAAGCCTGTTGTGCAACCCTC-TCATTAGGGCGCGTGGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6249685 37 - 8369475 -AAGCCTGTTGTGCAACCATC-TCATTAGGGCGCGTGGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63844677 38 - 106955855 AAAGCCTGTTGTGCAACCATC-TCATTAGGGCGCGTGGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30152941 38 + 53671032 AAAGCCTGTTGTGCAACCATC-TCATTAGGGCGCGTGGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34605804 38 + 59248254 AAAGCCTGTTGTGCAACCATC-TCATTAGGGCGCGTGGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4474196 38 - 13342542 AAAGCCTGTTGTGCAACCATC-TCATTAGGGCGCGTGGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5404691 38 + 7714307 AAAGCCTGTTGTGCAACCATC-TCATTAGGGCGCGTGGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29212510 38 + 50890351 AAAGCCTGTTGTGCAACCATC-TCATTAGGGCGCGTGGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826059 38 - 2385121 AAAGCCTGTTGTGCAACCATC-TCATTAGGGCGCGTGGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2271189 38 + 4274983 AAAGCCTGTTCTGCAACCATC-TCATTAGGGCGCGTGGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28503007 39 + 49145316 AAAGCCTGTTGTGCAACCATCTTCATTAGAGCGTGCGGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5345438 39 + 8899380 AAAGCCTGTTGTGCAACCATCTTCATTAGAGCGCGCGGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1557792 39 - 2680843 AAAGCCTGTTGTGCAACCATCTTCATTAGAGCGCGCGGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 307559 39 - 4471408 AAAGCCTGTTGTGCAACCATCTTCATTAGAGCGCGCGGT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 516843 38 + 2501019 AGAGGCTGTTGTGCAACCATC-TCTTTAGGGTGCATTTC i proCoq1.NW_012149263v1 I 3 C 0 s otoGar3.GL873654 5420379 38 + 5549422 CAGGTCTGTTGTGCAACTGTC-TGTGTAGGGTGTACTTT i otoGar3.GL873654 I 3 C 0 s mm10.chr7 111052671 24 - 145441459 --------TTATGCAACCGAA-------GGGTGCGCGTT i mm10.chr7 C 0 C 0 s dasNov3.JH563638 269247 38 + 643850 AAAGCCTGTTGAACAGCCATC-TCTTTTGGTTGCACATT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3919436 250 - 30143674 I e canFam3.chr1 4561693 836 - 122678785 M a score=578742.000000 s hg38.chr19_GL383574v1_alt 21136 42 + 155864 AAAAATGCTTGC-TGCTGC---CCCGA---CG-CCCCTGTTTCTGGAAAC s panTro5.chr19 36079960 42 + 61309027 AAAAATGCTTGC-TGCTGC---CCTGG---CG-CCCCTGTTTCTGGAAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39831938 42 + 64411610 AAAAATGCTTGC-TGCTGC---CCTGA---CG-CCCCTGTTTCTGGAAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6249722 42 - 8369475 AAAAATGCTTGC-TGCTGC---CCCGA---CG-CCCCTGTTTCTGGAAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63844715 42 - 106955855 AAAAATGCTTGC-TGCTGC---CCCGA---CG-CCCCTGTTTCTGGAAAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30152979 42 + 53671032 AAAAATGCTTGC-TGCTGC---CCCGA---CT-GCCCTGTTTCTGGAAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34605842 42 + 59248254 AAAAATGCTTGC-TGCTGC---CCCGA---CT-GCCCTGTTTCTGGAAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4474234 42 - 13342542 AAAAATGCTTGC-TGCTGC---CCCGA---CT-GCCCTGTTTCTGGAAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5404729 42 + 7714307 AAAAATGCTTGC-TGCTGC---CCCGA---CT-GCCCTGTTTCTGGAAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29212548 42 + 50890351 AAAAATGCTTGC-TGCTGC---CCCGA---CT-CCCCTGTTTCTGGAAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826097 42 - 2385121 AAAAATGCTTGC-TGCTGC---CCCGA---CT-GCCCTGTTTCTGGAAAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2271227 42 + 4274983 AAAAATGCTTGC-TGCTGC---CCCAA---CT-CCCTTGTTTCTGGAAAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28503046 42 + 49145316 AAAAATGTTTGC-TGCTTC---CCGGA---CG-CCCCTGCTTCTGGAAAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5345477 42 + 8899380 AAAAATGCTTGC-TGCTGT---CCCGA---CG-CCCCTGCTTCTGGAAAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1557831 43 - 2680843 AAAAATGCTTGC-TGCTGC---CCCGA---CGCCCCCTGCTTCTGGAAAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 307598 42 - 4471408 AAAAATGCTTGC-TGCTGC---CCCGA---CG-CCCCTGCTTCTGGAAAC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 516881 42 + 2501019 AGAAATGCTTGC-TACTGT---CCCGA---CG-ACCCTGTTTCTGGAAAC i proCoq1.NW_012149263v1 C 0 I 68 s otoGar3.GL873654 5420417 42 + 5549422 GAAAGTGTTTGC-TGCTGT---CCCCA---CG-ACCCTGTTTCTGAAAAT i otoGar3.GL873654 C 0 I 13 s mm10.chr7 111052695 42 - 145441459 -AAAATGCTTGCTTGCTGT---CCCCA---TG-GGCCAATTTTCTGGAAC i mm10.chr7 C 0 I 14 s canFam3.chr1 4562543 44 - 122678785 AAAAATGCTCGC-CGGGGTGCGCCCGG---GG-TACCCGGTGC-GGAGGC i canFam3.chr1 M 836 C 0 s dasNov3.JH563638 269285 41 + 643850 ----ATAAACGC-TGTTGT---CCGAAGACCC-TCCCTGCTTCTGGAAAC i dasNov3.JH563638 C 0 I 37 e micMur3.chr22 3919436 250 - 30143674 I a score=657482.000000 s hg38.chr19_GL383574v1_alt 21178 62 + 155864 GGGTTCAAGCT----TGATCCAGGATCCTTCTTGA-CCAGGCAAGCTTGACCTTTGATCCAGGC--TCA s panTro5.chr19 36080002 62 + 61309027 GGGTTCAAGCT----TGATCCAGGATCCTTCTTGA-CCAGGCAAGCTTGACCTTTGATCCAGGC--TCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39831980 62 + 64411610 GGGTTCAAGCT----TGATCCAGGATCCTTCTTGA-CCAGGCAAGCTTGACCTTTGATCCAGGC--TCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6249764 62 - 8369475 GGGTTCAAGCT----TGATCCAGGATCCTTCTTGA-CCAGGCAAGCTTGACCTTTGATCCAGGC--TCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63844757 62 - 106955855 GGGTTCAAGCT----TGATCTAGGAACCTTCTTGA-CCAGGCAAGCTTGACCTTTGATCCAGGC--TTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153021 62 + 53671032 GGGTTCAAGCT----TGATCCAGGATCCTTCTTGA-CCAGGCAAGCTTGACCTTTGATCCAGGC--TCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34605884 62 + 59248254 GGGTTCAAGCT----TGATCCAGGATCCTTCTTGA-CCAGGCAAGCTTGACCTTTGATCCAGGC--TCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4474276 62 - 13342542 GGGTTCAAGCT----TGATCCAGGATCCTTCTTGA-CCAGGCAAGCTTGACCTTTGATCCAGGC--TCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5404771 62 + 7714307 GGGTTCAAGCT----TGATCCAGGATCCTTCTTGA-CCAGGCAAGCTTGACCTTTGATCCAGGC--TCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29212590 62 + 50890351 GGGCTCAAGCT----TGATCCAGGATCCTTCCTGA-CCAGGCAAGCTTGACCTTTGATCCAGGC--TCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826139 62 - 2385121 GGGTTCAAGCT----TGATCCAGGATCCTTCTTGA-CCAGGCAAGCTTGACCTTTGATCCAGGC--TCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2271269 62 + 4274983 GGGTTCAAGCT----TGATCCAGGATCCTTCTTGA-CCAGGCAAGCTTGACCTTTGATCCAGGC--TCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28503088 62 + 49145316 GAGTTCAAGCT----TG-TCCGGGACCCTTCTTGATCCAGGCGATCTTGACCTTTGATCCAGGC--TCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5345519 63 + 8899380 GAGTTCAAGCT----TGATCCGGGACCCTTCTGGATCCAGGCAAGCTTGACCTTTGATCCAGGC--TCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1557874 63 - 2680843 GAGTTCAGGCT----TGATCCGGGACCCTTCTTGATCCAGGCAAGCTTGACCTTTGATCCAAGC--TCA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 307640 63 - 4471408 GAGTTCAAGCT----TGATCCGGGACCCTTCTTGATCCAGGCAAGCTTGACCTTTGATCCAGGC--TCA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5420472 39 + 5549422 GGGTTGGAGTT----TGATCCCGGACCTTCGTT---CC-----------------GATCTGGG------ i otoGar3.GL873654 I 13 I 9 s mm10.chr7 111052751 54 - 145441459 AAGTTTAAGTTTTGATGATCCGGGACTCTTGTACA-C------------ACTTCAGAGCGAGTA--CTA i mm10.chr7 I 14 I 1 s canFam3.chr1 4562587 42 - 122678785 GGGTTCGAGCT----TGACCCAGGTTGCACCCTCG-TCCCGAAGGCT---------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 269363 52 + 643850 GGGGTCAAGCT----TGATCCAGGACCCTTGTTCC-AAAGGCA------------CATCCTAGTGGTCA i dasNov3.JH563638 I 37 C 0 e proCoq1.NW_012149263v1 516923 68 + 2501019 I e micMur3.chr22 3919436 250 - 30143674 I a score=891987.000000 s hg38.chr19_GL383574v1_alt 21240 85 + 155864 GTGGGCGTTGACTGATCCCT-CTGGAGGCTCTCTGGGAAAG----GGAATTCGGC------CGAGAAG----GA---------AGGTGCCCCTA-CCCACAGTG--TTAATA s panTro5.chr19 36080064 85 + 61309027 GTGGGCGTTGACTGATCCCT-CTGGAGGCTCTCTGGGAAAG----GGAATTCGGC------CGAGAAG----GA---------AGGTGCCCCTA-CCCACAGTG--TTAATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832042 85 + 64411610 GTGGGCGTTGACTGATCCCT-CTGGAGGCTCTCTGGGAAAG----GGAATTCGGC------CGAGAAG----GA---------AGGTGCCCCTA-CCCACAGTG--TTAATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6249826 85 - 8369475 GTGGGCGTTGACTGATCCCT-CTGGAGGCTCTCTGGGAAAG----GGAATTCGAC------CGAGAAG----GA---------AGGTGCCCCTA-CCCACAGTG--TTAATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63844819 85 - 106955855 GTGGGCGTTGACTGATCCCT-CTGGAGGCTCTCTGGGAAAG----GGAATTCGGC------CGAGAAG----GA---------AGGTGCTCCTA-CCCATAGTA--TTAATA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153083 85 + 53671032 GTGGGCGTTGACTGATCCCT-CTGGAGGCTCTCTGGGAAAA----GGAATTCGGC------CGAGAAA----GA---------AGGTGCCCCTA-CCCATAGTA--TTAATA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34605946 85 + 59248254 GTGGGCGTTGACTGATCCCT-CTGGAGGCTCTCTGGGAAAA----GGAATTCGGC------CGAGAAA----GA---------AGGTGCCCCTA-CCCATAGTA--TTAATA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4474338 85 - 13342542 GTGGGCGTTGACTGATCCCT-CTGGAGGCTCTCTGGGAAAA----GGAATTCGGC------CGAGAAA----GA---------AGGTGTCCCTA-CCCATAGTA--TTAATA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5404833 85 + 7714307 GTGGGCGTTGACTGATCCCT-CTGGAGGCTCTCTGGGAAAG----GGAATTCGGC------TGAGAAG----GA---------AGGTGCCCCTA-CCCATAGTA--TTAATA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29212652 85 + 50890351 GTGGGCGTTGACTGATCCCT-CTGGAGGCTCTCTGGGAAAG----GGAATTCGGC------CGAGAAG----GA---------AGGTGCCCCTA-CCCATAGTA--TTAATA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826201 85 - 2385121 GTGGGCGTTGACTGATCCCT-CTGGAGGCTCTCTGGGAAAG----GGAATTCGGC------TGAGAAG----GA---------AGGTGCCCCTA-CCCATAGTA--TTAATA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2271331 81 + 4274983 GTGGGCGTTGACTGA----T-CTGGAGGCTCTCGGGGAAAG----GGAATTCGGC------CGAGAAG----GA---------AGGTGCCCCTA-CCCATAGTA--TTAATA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28503150 76 + 49145316 GTGGGCATTGACTGA----------AGGCTCGTTGGGAAAG----GGAATTCTGT------CGAGAAG----GA---------AGGTGCCCCTA-CCCATAGTA--TTAATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5345582 76 + 8899380 GTGGGCATTGACTGA----------AGGCTCGCTGGGAAAG----GGAATTCTGT------CGAGAAG----GA---------GGGTGCCCCTA-CCCATAGTA--TTAGTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1557937 72 - 2680843 GTGGGCATTGACTGA----------AGGCTCGCTGGGAAGG----GG----CTGT------CGAGAAG----GA---------AGGTGCCCCTA-CCCATAGTA--TTAATA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 307703 76 - 4471408 GTGGGCATTGACCGA----------AGGCTCGCTGGGAAAG----GGAATTCTGT------CGAGAAG----GA---------AGGTGCCCCTA-CCCATAGTA--TTAATA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 516991 79 + 2501019 GTGAGCGCCAACTGGTCTCT-CTGGGTGCTCGCTGGGAAAG----GGGGGTCTGT------TGAGGAG----GA---------AGGTGACCCAA-CCCACAGTA-------- i proCoq1.NW_012149263v1 I 68 C 0 s otoGar3.GL873654 5420520 72 + 5549422 GTGAGCAC-------------CTGGATGCTTGCTGAG-AAG----GGAGCTCTGTGGAGGACGAGGAG----GA---------AGGTGTCTCTA-CACATAGAA-------- i otoGar3.GL873654 I 9 C 0 s mm10.chr7 111052806 91 - 145441459 CGGGGCGCTGACCGACTCCG-CTGTA----CTTGGGGAGAG----GAAGTTGTGT------GGAAGGG----GATCCCCCCCTACTTACCCCAACCCCATAGTC--TGTACA i mm10.chr7 I 1 C 0 s canFam3.chr1 4562629 90 - 122678785 ----gcgccgcgcgggccctgccggcgggtcccggggacggcggcgggTTCGGGG------CGTGGAGCACCGA---------AGGG--CCCTG-CCCCTAGGATCTCACTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 269415 82 + 643850 GTGGGCACTGACAGAACCCG-GTAGAGGCATGCTAGAAAAG----GGAGTTCTGG---ATGTGAGGAG----GA---------GAGTGCCATTA-----TAGTA--TTTA-- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3919436 250 - 30143674 I a score=3053960.000000 s hg38.chr19_GL383574v1_alt 21325 206 + 155864 TTTGGCATCCCTAGAGTC--TGTGTGGG-TTTTGTTTCCGTTCACACGT-GCAGGGCCTTT-GCTCCGCCAGG---AAACCAGAAAGAAAAT--AAA---CTTTAGCTCCTGAATC-TTAAAGGAAATCTCACAACAGTGTAAAATA-CTTT----GAGGGAAGCTA---GATAA-CCTAGGTGATTTTCCCA-GCACTTC-TGGTAGAGGTGGGAACTGCAT-AGCATGGT s panTro5.chr19 36080149 206 + 61309027 TTTGGCATCCCTAGAGTC--TGTGTGGG-TTTTGTTTCCGTTCACACGT-GCAGAGCCTTT-GCTCCGCCAGG---AAACCAGAAAGAAAAT--AAA---CTTTAGCTCCTGAATC-TTAAAGGAAATCTCACAACAGTGTAAAATA-CTTT----GAGGGAAGCTA---GATAA-CCTAGGTGATTTTCCCA-GCACTTC-TGGTAGAGGTGGGAACTGCAT-AGCATGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832127 206 + 64411610 TTTGGCATCCCTAGAGTC--TGTGTGGG-TTTTGTTTCCGTTCACACGT-GCAGAGCCTTT-GCTCCGCCAGG---AAACCAGAAAGAAAAT--AAA---CTTTAGCTCCTGAATC-TTAAAGGAAATCTCACAACAGTGTAAAATA-CTTT----GAGGGAAGCTA---GATAA-CCTAGGTGATTTTCCCA-GCACTTC-TGGTAGAGGTGGGAACTGCAT-AGCATGGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6249911 206 - 8369475 TTTGGCATCCCTAGAGTC--TGTGTGGG-TTTTGTTTCCGTTCACACGT-GCAGGGCCTTT-GCTCCGCCAGG---AAACCAGAAAGAAAAT--AAA---CTTTAGCTCCTGAATC-TTAAAGGAAATCTCACAACAGTGTAAAATA-CTTT----GAGGGAAGCTA---GATAA-CCTAGGTGATTTTCCCA-GCACTTC-TGGTAGAGGTGGGAACTGCAT-AGCATGGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63844904 206 - 106955855 TTTGGCATCTCTAGAGTC--TGTGTGGG-TTTTGTTTCCGTTCACACGT-GCAGGCCCTTT-GCTCCGCCAGG---AAACCAGAAAGAAAAT--AAA---CTTTAGCTCCTGAATC-TTAAAGAAAATCTCACAACAGTGTAAAATA-CTTT----GGGGGAAGCTA---GATAA-CCTAGGTGATTTTCCCA-GCACATC-TGGTAGAGATGGGAACTGCAT-GGCATGGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153168 204 + 53671032 TTTGGCATCGCTAGAGTC--TGTGTGGG-TTTTGTTTCCGTTCACACGT-GCAGGGCCTTT-GCTCTGCCAGG---AAACCAGAAAGTAAAT--AAA---C--TAGCTCCTGAATC-TTAAAGGAAATCTCACAACAGTGTAAAATA-CTTT----GGGGGAAGCTA---GATAA-CCTAGGTGATTTTCCCA-GCACTTC-TGGTAGAGGTGGGAGCTGCAT-AGCATGGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606031 204 + 59248254 TTTGGCATCGCTAGAGTC--TGTGTGGG-TTTTGTTTCCGTTCACACGT-GCAGGGCCTTT-GCTCTGCCAGG---AAACCAGAAAGTAAAT--AAA---C--TAGCTCCTGAATC-TTAAAGGAAATCTCACAACAGTGTAAAATA-CTTT----GGGGGAAGCTA---GATAA-CCTAGGTGATTTTCCCA-GCACTTC-TGGTAGAGGTGGGAGCTGCAT-AGCATGGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4474423 204 - 13342542 TTTGGCATCGCTAGAGTC--TGTGTGGG-TTTTGTTTCCGTTCACACGT-GCAGGGCCTTT-GCTCTGCCAGG---AAACCAGAAAGTAAAT--AAA---C--TAGCTCCTGAATC-TTAAAGGAAATCTCACAACAGTGTAAAATA-CTTT----GGGGGAAGCTA---GATAA-CCTAGGTGATTTTCCCA-GCACTTC-TGGTAGAGGTGGGAGCTGCAT-AGCATGGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5404918 204 + 7714307 TTTGGCATAGCTAGAGTC--TGTGTGGG-TTTTGTTTCCGTTCACACGT-GCAGGGCCTTT-GCTCTGCCAGG---AAACCAGAAAGTAAAT--AAA---C--TAGCTCCTGAATC-TTAAAGGAAATCTCACAACAGTGTAAAATA-CTTT----GGGGGAAGCTA---GATAA-CCTAGGTGATTTTCCCA-GCACTTC-TGGTAGAGGTGGGAGCTGCAT-AGCATGGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29212737 203 + 50890351 TTTGGCATCGCTAGAGTC--TGTGTGGG-TTTTGTTTCCGTTCACACGT-GCAGGGCCTTT-GCTCTGCCAGG----AACCAGAAAGTAAAT--AAA---C--TAGCTCCTGAATC-TTAAAGGAAATCTCACAACAGTGTAAAATA-CTTT----GGGGGAAGCTA---GATAA-CCTAGGTGATTTTCCCA-GCACTTC-TGGTAGAGGTGGGAGCTGCAT-AGCATGGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826286 204 - 2385121 TTTGGCATCGCTAGAGTC--TGTGTGGG-TTTTGTTTCCGTTCACACGT-GCAGGGCCTTT-GCTCTGCCAGG---AAACCAGAAAGTAAAT--AAA---C--TAGCTCCTGAATC-TTAAAGGAAATCTCACAACAGTGTAAAATA-CTTT----GGGGGAAGCTA---GATAA-CCTAGGTGATTTTCCCA-GCACTTC-TGGTAGAGGTGGGAGCTGCAT-AGCATGGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2271412 206 + 4274983 TTTGGCATCGCTAGAGTC--TGTGTGGG-TTTTGTTTCCGTTCACACGT-GCAGGGCCTTT-GCTCTGCCAGG---AAACCAGAAAGAAAAT--AAA---CTTTAGCTCCTGAATC-TTAAAGGAAATCTCACAACAGTGTAAAATA-CTTT----GGGGGAAGCTA---GATAA-CCTAGGTGATTTTCCCA-GCACTTA-TGGTAGAGGTGGGAACTGCAT-AGCATGGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28503226 202 + 49145316 TTTGGCATCCCTAGA------GTGTGGG-TTTTGTTTCCGTTCACACGT-GCAGGGCCTTT-GCTCCTCCAGG---AAAGCAGAAAGAAAAT--AAA---CGTTAGCTCCTGAATC-TT-AAGGAAATCTCACAATAGTGTAAAATA-TTTT----GGGGGAAGCTA---GATAA-CCTAGGTGATTTTCCCA-GCGCTTC-TGGTAGAGGTGGGAACTGCATAAGCATGCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5345658 206 + 8899380 TTTGGCATCGCTAGAGCC--TGTGTGGG-TTTTGTTTCCGTTCACACGT-GCAGGGCATTT-GCTCCTCCAGG---AAACCAGAAAGAAAAT--AAA---CTTTAGCTCCTGAATC-TTAAAGGAACTCTCACAACAGTTTAAAATA-CTTT----GGGGGAAGCTA---GATAA-CCTGGGTGATTTTCCCA-GCACTTC-TGGTAGAGGTGGGAACTGCAT-AGCATGCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1558009 207 - 2680843 TTTGGCATCGCTAGAGTC--TGTGTGGG-TTTTGTTTCCGTTCACACGT-GCAGGGCCTTT-GCTCCTCCAGG---AAACCAGAAAGAAAAT--AAA---CTTTAGCTCCCAAATC-TTAAAGGAAATCTCACAACAGTATAAAATAGCTTC----GGGGGAAGCTA---GATAA-CCTGGGTGATTTTCCCA-CCACTTC-TGGTAGAGGTGGGAACTGCAT-AGCATGCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 307779 206 - 4471408 TTTGGCATCGCTAGAGGC--TGTGTGGG-TTTTGTTTCCGTTCAAATGT-TCAGGGCCTTT-GCTCCTCCAGA---AAACCAGAAAGAAAAT--AAA---CTTTAGCTCCTGAATC-TTAAAGGAAATCTCACAACAGTATAAAATA-CTTT----GGGGGAAGACA---GATAA-CCTGGGTGATTTTCCCA-GCACTTC-TGGTAGAGGTGGGAACTGCAT-AGCATGCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3919686 209 - 30143674 TTTGGCATCGCTCTAGTC--TGTGTGCG-TTTTGTTTCCGTTCACGCGT-GCTGGGCCTTT-GCTCCGCCAGG---AAACCAGAAAGAAAATAAAAA---CTTTAGCTCTCT-GTCGTTAAAGGAAATGTCACGACAGTTTAGAATA-CTTA----CGGGGAAGAAA---GGTAA-CCCAGGTAATTTCCCCA-GCACAGCTTGGTAGAGGTAGGAGCTGCAT-AGCCTGGT i micMur3.chr22 I 250 I 281 s proCoq1.NW_012149263v1 517070 207 + 2501019 TTTGACATCACTGTAGTC--TATGTGGG-TTTTGTTTCCGTTCTCATGT-GCTGGGCCTTT-GCTCTGCCAGG---AAACCAGAAAGAAAAT-AAAA---CTTTAGCTCCCG-ATC-TTAAAGGAAATATCACAACAGTTTGGAATA-CTTA----GAAGGAAGCAA---GATAAGCTCAGGTAATTTTCCCA-GCACAGC-TGGTAAAGGTAGGAACTGCAT-AGCATGGT i proCoq1.NW_012149263v1 C 0 I 290 s otoGar3.GL873654 5420592 204 + 5549422 TTTGGCATCCCTATAGTC--TGTGTGGGTTTTTGTTTCCGTTCACACGT-GCTGGGCCTTTCGCTCTGCCAGG---AAACCAGAAAGAAAAT-AAAA---CTTTACCTCCAG-ATG-TCAAAGGACATCTCA--ACAGTTTGGGATA-CTT-----GGGGGAAGTGA---GATAA-CCCAGGTAATTCTCCCA-GCACATC-TGGTAGAAGGAGGAACTGTAT-AGCAGAG- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111052897 175 - 145441459 ------GTCGATACAGTCAATTTGTGGG-TTTTGTTTCCGTTCACGCGT-GCTAG-----T-G-----ACAGG---AAGGCACAAAGAAAAT--AAA---CTTGAGTTTCTG-ATC-CTAGGGGAAGTCTTATAACAGTTTCTGATA-CCAG----GGAGG---------------TCT-----ATTTTCCTA-CCACACC-TAGTAGAATTGTTAAGAACTA-AGTATGCT i mm10.chr7 C 0 I 5 s canFam3.chr1 4562719 198 - 122678785 ---AGCGTCGCCCC-GTC--TGAGTGGGGTTTTGTTTCCGTTCACACGTGGTGGGGCCTTG-GCTCCGCCGGA---AAACCGGCAAGAACGT--AAA---CTTGAGCTCCCGCTTC-CTCAGG----TCTCACG--AGTTTGGGATG-ACTTAGGCGAGGGGAGCAAGGTGATAA-CCAAGGTAGCCTTTCCAGGTACATC-TGGTAGAGAGACGGAACGAAT--------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 269497 198 + 643850 TTTAGCGTCGCCACCGTC--TGTTTGGG---TTGTTTCCTTTCACACAT----GGGCCTTT-TCTCTGCCAGGAGGAAATCAGGAAGAAAAT--AAATCTCCTTAGCTCCTG-ATC-CTAAAGGAAATCTCACACCAGTT---AGGA---------GAGGGAAGCTA---GATA--CCAAGGTTATTTCCCCA-GTACATA-TGGTAAAGTTGTGGATTGAAT-AGCATGGT i dasNov3.JH563638 C 0 C 0 a score=156891.000000 s hg38.chr19_GL383574v1_alt 21531 18 + 155864 TA-GGGACCCTGTGGATAG s panTro5.chr19 36080355 18 + 61309027 TA-GGGACCCTCTGGATAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832333 18 + 64411610 TA-GGGACCCTCTGGATAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250117 18 - 8369475 TA-GGGACCCTCTGGATAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845110 18 - 106955855 TA-GGGACCCTCTGGGTAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153372 18 + 53671032 TA-GGGACTCTCTGGGTAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606235 18 + 59248254 TA-GGGACTCTCTGGGTAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4474627 18 - 13342542 TA-GGGACTCTCTGGGTAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405122 19 + 7714307 TAGGGGACTCTCTGGGTAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29212940 18 + 50890351 TA-GGGACCCTCTGGGTAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826490 19 - 2385121 TAGGGGACTCTCTGGGTAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2271618 18 + 4274983 TA-GGGACCCTCTGGATAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28503428 18 + 49145316 TA-GGGATCCTCTAGATAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5345864 18 + 8899380 TA-GGGATCCTCTAGATAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1558216 18 - 2680843 TA-GGGATCCTCTAGATAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 307985 18 - 4471408 TA-GGGATCCTCTAGATAG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5420796 10 + 5549422 TA-GGGA-------GAGA- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111053077 18 - 145441459 AA-AAGGTCCTAGGGATAG i mm10.chr7 I 5 I 2304 s canFam3.chr1 4562917 13 - 122678785 ---GAGACCGT---GGTAG i canFam3.chr1 C 0 I 4 s dasNov3.JH563638 269695 13 + 643850 ------AGGTTCAGAGCAG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e micMur3.chr22 3919895 281 - 30143674 I a score=29403.000000 s hg38.chr19_GL383574v1_alt 21549 4 + 155864 GTTA- s panTro5.chr19 36080373 4 + 61309027 GTTA- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832351 4 + 64411610 GTTA- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250135 4 - 8369475 GTTA- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845128 4 - 106955855 GTTA- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153390 4 + 53671032 GTTT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606253 4 + 59248254 GTTT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4474645 4 - 13342542 GTTT- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405141 4 + 7714307 GTTA- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29212958 4 + 50890351 GTTA- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826509 4 - 2385121 GTTA- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2271636 4 + 4274983 GTTA- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28503446 4 + 49145316 GTCA- i calJac3.chr22 C 0 I 2 s saiBol1.JH378197 5345882 4 + 8899380 GTTA- i saiBol1.JH378197 C 0 I 2 s cebCap1.NW_016107633v1 1558234 4 - 2680843 GTTA- i cebCap1.NW_016107633v1 C 0 I 555 s aotNan1.NW_018505377v1 308003 4 - 4471408 GTTA- i aotNan1.NW_018505377v1 C 0 I 2 s canFam3.chr1 4562934 1 - 122678785 ---A- i canFam3.chr1 I 4 I 3 s dasNov3.JH563638 269708 4 + 643850 -TTAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e micMur3.chr22 3919895 281 - 30143674 I e otoGar3.GL873654 5420806 0 + 5549422 C e mm10.chr7 111053095 2304 - 145441459 I a score=930995.000000 s hg38.chr19_GL383574v1_alt 21553 112 + 155864 GGTCCAAGGATAAA---GAAGAAGATTTTCGAAATCTGT--AAAA-TTTTAA----AAATCGTTAACA---GATAG-----------------GGGAGTGGTTTCACGGGATCA----AGTATTTAATAATATTTC---TTGGATGCTC s panTro5.chr19 36080377 112 + 61309027 GGTCCAAGGATAAA---GAAGAAGATTTTCGAAATCTGT--AAAA-TTTTAA----AAATCGTTAACT---GATAG-----------------GGGAGTGGTTTCACGGGATCA----AGTATTTAATAATATTTC---TTGGATGCTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832355 112 + 64411610 GGTCCAAGGATAAA---GAAGAAGATTTTCGAAATCTGT--AAAA-TTTTAA----AAATCGTTAACT---GATAG-----------------GGGAGTGGTTTCACGGGATCA----AGTATTTAATAATATTTC---TTGGATGCTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250139 111 - 8369475 GGTCCAAGGATAA-----AAGAAGATTTTCGAAATCTGT--AAAATTTTTTA----AAATCGTTAACT---GATAG-----------------GGGAGTGGTTTCACGGGATCA----AGTATTTAATAATATTTC---TTGGATGCTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845132 109 - 106955855 GGTCCAAGGATA------AAGAAGGTTTTCGAAATCTGT--AAAA-TTTTAA----AAATCGTTAACT---GATAG-----------------GGGAGTGGTTTCACGGGATCA----AGTATTTAATAATATTTC---TTGGATGCTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153394 109 + 53671032 GGTCCAAGGATA------AAGAAGATTTTTGAAATCTGT--AAAC-TTTTAA----AAATCGTTAACT---GATAG-----------------GGAAGTGGTTTCACGGGATCA----AGTATTTAATAATACTTG---TTGGATGCTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606257 109 + 59248254 GGTCCAAGGATA------AAGAAGATTTTTGAAATCTGT--AAAC-TTTTAA----AAATCGTTAACT---GATAG-----------------GGAAGTGGTTTCACGGGATCA----AGTATTTAATAATACTTG---TTGGATGCTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4474649 109 - 13342542 GGTCCAAGGATA------AAGAAGATTTTTGAAATCTCT--AAAC-TTTTAA----AAATCGTTAACT---GATAG-----------------GGAAGTGGTTTCACGGGATCA----AGTATTTAATAATACTTG---TTGGATGCTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405145 109 + 7714307 AGTCCAAGGATA------AAGAAGATTTTTGAAATCTGT--AAAC-TTTTAA----AAATCGTTAACT---GATAG-----------------GGAAGTGGTTTCACGGGATCA----AGTATTTAATAATACTTG---TTGGATGCTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29212962 112 + 50890351 GGTCCAAGGATAAA---GAAGAAGATTTTTGAAATCTGT--AAAC-TTTTAA----AAATCGTTAACT---GATAG-----------------GGAAGTGGTTTCACGGGATCA----AGTATTTAATAATACTTG---TTGGATGCTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826513 109 - 2385121 GGTCCAAGGATA------AAGAAGATTTTTGAAATCTGT--AAAC-TTTTAA----AAATCGTTAACT---GATAG-----------------GGAAGTGGTTTCACGGGATCA----AGTATTTAATAATACTTG---TTGGATGCTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2271640 109 + 4274983 GGTCCAAGGATA------AAGAAGATTTTTGAAATCTGT--AAAC-TTTTAA----AAATCGTTAGCT---GATAG-----------------GGGAGTGATTTCATGGGATCA----AGTATTTAATAACACTTG---TTGGATGCTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28503452 110 + 49145316 GGTACAAGGATA------AGGAAGATTTTCATAATCTGT--AAAA-TTTTTT----AAATCTTTAACT---GATAG-----------------GGGAGTGGTTTCACGGAATCA----AGTATTTCAGGACATTTC--TTTGGATGCTT i calJac3.chr22 I 2 C 0 s saiBol1.JH378197 5345888 110 + 8899380 GGTACAAGGATA------AGGAAGGTTTTCGTAATCTGT--AAAA-TTTTTT----GAATCGTTTACT---GATAG-----------------GGGAGTGGTTTCACGGAATCA----AGTATTTAAGGACATTTC--TTTGGATGCTC i saiBol1.JH378197 I 2 C 0 s aotNan1.NW_018505377v1 308009 110 - 4471408 GGTACAAGGATA------AGAAAGATTTTCGTAATCTGT--AAAA-TTTTTT----AAATCGTTAACT---GATAG-----------------GGGAGTGGTTTCACGGAATCA----AGTATTTAAGGACATTTC--TTTGGACTCTT i aotNan1.NW_018505377v1 I 2 C 0 s otoGar3.GL873654 5420806 134 + 5549422 GATTCAAGGATAGA----AAGAAAAATTTCTAAACCTAT--CAAG-TTTTTT----TTTTTGttgttttgagatagtctcagtctgtccccctgggtagggtgccatgatgtca----tggctcgcaacaccctccagcttaggggctc i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4562938 118 - 122678785 GGCCCAGGGCCAG-----GAAGAAATTTTCTAAGTCTGC--AAAA-AAAAGAAGACAAATTTATAACG---GAGCG-----------------GGAAGTTATTTCACAGCATCACACGAGTACTTAGTGACATTTG---GGGGGTCCTT i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 269712 115 + 643850 AGTTCACTGATGGAAGGAAAAAAAATTTT--AACTCCATTAAAAA-AAATGT----TAATCTTTAACT---GATGA-----------------GACAGTCATTTCAC-ACAGCA----ATTATTTAATGACTTTGC--TTTGGATGTTC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e micMur3.chr22 3919895 281 - 30143674 I e mm10.chr7 111053095 2304 - 145441459 I e cebCap1.NW_016107633v1 1558238 555 - 2680843 I a score=83146.000000 s hg38.chr19_GL383574v1_alt 21665 13 + 155864 TGGTAAA------------------------TCC-ttt s panTro5.chr19 36080489 13 + 61309027 TGGTAAA------------------------TCC-ttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832467 13 + 64411610 TGGTAAA------------------------TCC-ttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250250 13 - 8369475 TGGTAAA------------------------TCC-ttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845241 37 - 106955855 TGGTAAATTcttccttccttccttccttccttcc-ttc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153503 13 + 53671032 TGGTAAA------------------------TCC-ttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606366 13 + 59248254 TGGTAAA------------------------TCC-ttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4474758 13 - 13342542 TGGTAAA------------------------TCC-ttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405254 13 + 7714307 TGGTAAA------------------------TCC-ttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213074 10 + 50890351 TGGTAAA------------------------TCC---- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826622 13 - 2385121 TGGTAAA------------------------TCC-ttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2271749 13 + 4274983 TGGTAAA------------------------TCC-ttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28503562 14 + 49145316 TGGTAAA------------------------TCCCttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5345998 10 + 8899380 TGGTAAA------------------------TCC---- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 308119 13 - 4471408 TTGTAAA------------------------TCC-ttt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5420940 13 + 5549422 aactgat------------------------cct-ctt i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 269827 13 + 643850 TATTAGA------------------------TAC-TTT i dasNov3.JH563638 C 0 I 180 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e micMur3.chr22 3919895 281 - 30143674 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563056 0 - 122678785 C e cebCap1.NW_016107633v1 1558238 555 - 2680843 I a score=167604.000000 s hg38.chr19_GL383574v1_alt 21678 48 + 155864 atttatttatttatttatttattt----------ttctaagatgga-gtttagctctt-t s panTro5.chr19 36080502 52 + 61309027 atttatttatttatttatttattt------atttttctaagatgga-gtttagctctt-t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832480 48 + 64411610 atttatttatttatttatttattt----------ttctaagatgga-gtttagctctt-t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250263 58 - 8369475 atttatttatttatttatttatttatttTTAtttttctgagatgga-gtttagctctt-t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845278 58 - 106955855 ctttctttctttcttcctttctttctttctttttttctgagatgga-gtttagctctt-t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153516 35 + 53671032 atttatttattt----------------------ttctgagatgga-gtttagctctt-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606379 35 + 59248254 atttatttattt----------------------ttctgagatgga-gtttagctctt-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4474771 35 - 13342542 atttatttattt----------------------ttctgagatgga-gtttagctctt-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405267 35 + 7714307 atttatttattt----------------------ttctgagataga-gtttagctctt-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213084 34 + 50890351 -tttatttattt----------------------ttctgagatgtt-gtttagctctt-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826635 35 - 2385121 atttatttattt----------------------ttctgagatgga-gtttagctctt-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2271762 36 + 4274983 atttatttattt----------------------ttctgagatgga-gtttagctcttt- i colAng1.NW_012111697v1 C 0 I 5 s calJac3.chr22 28503576 45 + 49145316 ttttttttcctc--tctctccttc----------ccctgagatgga-gtttcgctctc-- i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5346008 39 + 8899380 ------TTTCCC--CCACCCCTTC----------CCCtgagatgga-gtttcgctctt-- i saiBol1.JH378197 C 0 I 1 s aotNan1.NW_018505377v1 308132 45 - 4471408 tttttttttttt--cttctccttc----------ccctgagatgga-atttcactctt-- i aotNan1.NW_018505377v1 C 0 I 1 s otoGar3.GL873654 5420953 39 + 5549422 gctcagtttttc-------tattt----------ttagtagagaaaggtctcactc---- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e micMur3.chr22 3919895 281 - 30143674 I e dasNov3.JH563638 269840 180 + 643850 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563056 0 - 122678785 C e cebCap1.NW_016107633v1 1558238 555 - 2680843 I a score=23784.000000 s hg38.chr19_GL383574v1_alt 21726 14 + 155864 ttgctcaggctgga s panTro5.chr19 36080554 14 + 61309027 ttgcccaggctgga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832528 14 + 64411610 ttgcccaggctgga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250321 14 - 8369475 tggcccaggctgga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845336 14 - 106955855 ttgcccaggctgga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153551 7 + 53671032 tagatca------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606414 7 + 59248254 tagatca------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4474806 7 - 13342542 tagatca------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405302 7 + 7714307 tagatca------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213118 7 + 50890351 tagatca------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826670 7 - 2385121 tagatca------- i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28503622 14 + 49145316 ttgcccaggctgga i calJac3.chr22 I 1 I 3 s saiBol1.JH378197 5346048 14 + 8899380 ttgcccaggctgga i saiBol1.JH378197 I 1 I 3 s aotNan1.NW_018505377v1 308178 14 - 4471408 ttgcccgggctgga i aotNan1.NW_018505377v1 I 1 I 3 s otoGar3.GL873654 5420992 14 + 5549422 ttgctgaggctggt i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e micMur3.chr22 3919895 281 - 30143674 I e dasNov3.JH563638 269840 180 + 643850 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563056 0 - 122678785 C e cebCap1.NW_016107633v1 1558238 555 - 2680843 I e colAng1.NW_012111697v1 2271798 5 + 4274983 I a score=95173.000000 s hg38.chr19_GL383574v1_alt 21740 18 + 155864 gtgcaaaggcaatgattt s panTro5.chr19 36080568 18 + 61309027 gtgcaaaggcaatgattt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832542 18 + 64411610 gtgcaaaggcaatgattt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250335 18 - 8369475 gtgcaaaggcaatgattt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845350 17 - 106955855 gtgcaatggc-atgatct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153558 16 + 53671032 -tgcaatggc-ataatct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606421 16 + 59248254 -tgcaatggc-ataatct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4474813 16 - 13342542 -tgcaatggc-ataatct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405309 16 + 7714307 -tgcaatggc-ataatct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213125 16 + 50890351 -tgcaatgac-atgatct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826677 16 - 2385121 -tgcaatggc-ataatct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2271803 17 + 4274983 gtgcaatggc-atgatct i colAng1.NW_012111697v1 I 5 C 0 s calJac3.chr22 28503639 17 + 49145316 ctgcaatggc-atgatcc i calJac3.chr22 I 3 C 0 s saiBol1.JH378197 5346065 17 + 8899380 ctgcaatggc-atgatcc i saiBol1.JH378197 I 3 C 0 s aotNan1.NW_018505377v1 308195 17 - 4471408 ctgcaatgac-atgatcc i aotNan1.NW_018505377v1 I 3 C 0 s otoGar3.GL873654 5421006 6 + 5549422 -ctcaaa----------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e micMur3.chr22 3919895 281 - 30143674 I e dasNov3.JH563638 269840 180 + 643850 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563056 0 - 122678785 C e cebCap1.NW_016107633v1 1558238 555 - 2680843 I a score=1175525.000000 s hg38.chr19_GL383574v1_alt 21758 115 + 155864 cggctcactgcaacgtccgcctcccgggttcaagtgattctcctgcctcagcctccc-aagtagctgggattataggcgcctgccaccacccctagct--aatttg----gtatttttagta s panTro5.chr19 36080586 115 + 61309027 cggctcactggaacgtccgcctcccgggttcaagtgattctcctgcctcagcctccc-aagtagctgggattataggcgcctgccaccacccctggct--aatttg----gtatttttagta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832560 115 + 64411610 cggctcactggaacgtccgcctcccgggttcaagtgattctcctgcctcagcctccc-aagtagctgggattataggcgcctgccaccacccctggct--aatttg----gtatttttagta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250353 115 - 8369475 cggctcactgcaacgtccgcctcccgggttcaagtgattctcctgcctcagcctccc-aagtagctgggattataggcgcctgccaccacccctggct--aatttg----gtatttttagta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845367 115 - 106955855 cggctcactgcaacgtccgcctcccgggttcaagtgattcttctgcctcagcctccc-aagtagctgggattataggcgcctgccaccacccccggct--aatttg----gtatttttagta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153574 115 + 53671032 cagctcactgcaatctccgcctcccgggttcaagtgattctcctgcctcagcatccc-aagtacctgggattataggggcccgccaccacgcccggct--aatttg----gtatttttagta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606437 115 + 59248254 cagctcactgcaatctccgcctcccgggttcaagtgattctcctgcctcagcatccc-aagtacctgggattataggggcccgccaccacgcccggct--aatttg----gtatttttagta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4474829 115 - 13342542 cagctcactgcaatctccgcctcccgggttcaagtgattctcctgcctcagcatccc-aagtacctgggattataggggcccgccaccacgcccggct--aatttg----gtatttttagta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405325 115 + 7714307 cagttcactgcaatctccgcctcccgggttcaagtgattctcctgcctcagcatccc-aagtacctgggattataggggcccgccaccaggcccggct--aatttg----gtatttttagta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213141 115 + 50890351 cggctcactgcaatctccgcctcccgggttcaagtgattctcctgcctcagcatccc-aagtacctgggattataggggcccgccaccacgcccggct--aatttg----gtatttttagta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826693 115 - 2385121 cagttcactgcaatctccgcctcccgggttcaagtgattctcctgcctcagcatccc-aagtacctgggattataggggcccgccaccacgcccggct--aatttg----gtatttttagta i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2271820 115 + 4274983 cggctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcatccc-aagtacctgggattataggcgcccgccaccacacccggct--agtttg----gtatttttagta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28503656 116 + 49145316 cggcttactgcaatctctgcctcccgggttcaagcgattctcctgcctcagcctcccaaagtagctgggatcactggcatccgccacagcgccctgct--aatttt----gtgttttgagta i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346082 115 + 8899380 cggcttactgtaacctccacctcccgggttcaagcgattctcctgcctcagcctccc-aagtagctaggattacaggtatccgccaccacgcccggct--aatttt----gtatttttagta i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1558793 115 - 2680843 cggcttactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctccc-aggtagctgggattacaggcatccgccaccacgcctggct--aatttt----gtatttttagta i cebCap1.NW_016107633v1 I 555 C 0 s aotNan1.NW_018505377v1 308212 115 - 4471408 cggcttactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctccc-aagtagctgggattacaggcatccgccgccacgcccggct--aatttt----gtgtttttagta i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5421012 100 + 5549422 ---------------------ctctgaactcaggcaatccacccgcctcagcctccc-agagtgctgggattatgggcgtgagccaccacgcccagccCAAACCTGTGAAGTATTTTCAGTC i otoGar3.GL873654 C 0 I 111 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e micMur3.chr22 3919895 281 - 30143674 I e dasNov3.JH563638 269840 180 + 643850 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563056 0 - 122678785 C a score=799484.000000 s hg38.chr19_GL383574v1_alt 21873 87 + 155864 gagacggggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctcggccacccaaagtgctggg s panTro5.chr19 36080701 87 + 61309027 gagacggggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctcggccacccaaagtgctggg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832675 87 + 64411610 gagacggggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctcggccacccaaagtgctggg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250468 87 - 8369475 gagacggggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccgcccgcctcggccacccaaagtgctggg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845482 87 - 106955855 gagacggggtttcaccgtgatggccaggctggtctcgaactcctgacctcaggtgatccacccgcttcggccacacaaagtgctggg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153689 87 + 53671032 gagacagggtttcatcatgttggccaggctggtctcgaactcctgacctccggtgatccacccgcctcagcctcccaaagtgctggg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606552 87 + 59248254 gagacagggtttcatcatgttggccaggctggtctcgaactcctgacctccggtgatccacccgcctcagcctcccaaagtgctggg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4474944 87 - 13342542 gagacagggtttcatcatgttggccaggctggtctcgaactcctgacctccggtgatccacccgcctcagcctcccaaagtgctggg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405440 87 + 7714307 gaaacagggtttcatcatgttggccaggctggtctcgaactcctgacctccggtgatccacccgcctcggcctcccaaagtgctggg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213256 87 + 50890351 gagacagggtttcatcatgttggccaggctggtctcgaactcctaacctccggtgatccacccgcctcggcctcccagagtgctggg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826808 87 - 2385121 gaaacagggtttcatcatgttggccaggctggtctcgaactcctgacctccggtgatccacccgcctcggcctcccaaagtgctggg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2271935 87 + 4274983 gagacagggtttcatcatgttggccaggctgatctcgaactcctgacctcaggtgatccacccgcctcggcctcccaaagtgctggg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28503772 86 + 49145316 gagacggggtttcaccaggttggccagtctggtctt-aactcccgacctcagttgatcaaccctcctgagcctcccaaattgctggg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346197 86 + 8899380 gagacagggtttcaccatgttggccagtgtggtctt-aactcctgacctcagttgatccacccacctgagcctcccaaattgctggg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1558908 68 - 2680843 gagacggggtttcgccatgttggccagtctggtctt-aactcctgg------------------cctgagcttcccaaattgctggg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308327 86 - 4471408 gagacagggtttcaccatgttggccaatctagtctt-aactcccgacctcagttgatccacccacctgagcctcccaaattgctggg i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e micMur3.chr22 3919895 281 - 30143674 I e dasNov3.JH563638 269840 180 + 643850 I e otoGar3.GL873654 5421112 111 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563056 0 - 122678785 C a score=380081.000000 s hg38.chr19_GL383574v1_alt 21960 42 + 155864 attacaggcatgagccacc-gcgcccagc---------------------cTCTGGTAAATCTT------ s panTro5.chr19 36080788 42 + 61309027 attacaggcatgagccacc-acgcccagc---------------------cTCTGGTAAATCTT------ i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832762 42 + 64411610 attacaggcatgagccacc-acgcccagc---------------------cTCTGGTAAATCTT------ i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250555 42 - 8369475 attacaggcatgagccacc-gcgcccagc---------------------cTCTGGTAAATCTT------ i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845569 42 - 106955855 attacaggcatgagccacc-gtgcccagc---------------------cTCTGGTAAATCTT------ i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153776 42 + 53671032 attacaggcgtgagccacc-gcacccagc---------------------cTAAGGTAAATCTT------ i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606639 42 + 59248254 attacaggcgtgagccacc-gcacccagc---------------------cTAAGGTAAATCTT------ i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475031 42 - 13342542 attacaggcgtgagccacc-gcacccagc---------------------cTCAGGTAAATCTT------ i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405527 46 + 7714307 attacaggcatgagccacc-gcgtccagcc-----------------TCACTCAGGTAAATCTT------ i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213343 42 + 50890351 attacaggcgtgagccacc-gcgcccagc---------------------cTCAGGTAAATCTT------ i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826895 42 - 2385121 attacaggcgtgagccacc-gcgcccagc---------------------cTCAGGTAAATCTT------ i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272022 48 + 4274983 attacaggcatgagccact-gcgcccagc---------------------cTCAGGTAAATCTTTTTAGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28503858 42 + 49145316 attataggcgagagctacc-acgcctggc---------------------cTCTGGTAAATCTT------ i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346283 42 + 8899380 attataggcgagagccacc-acgcccagc---------------------cTCTGATAAATCTT------ i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1558976 41 - 2680843 attataggcgagagtcacc-acgcc-ggc---------------------cTCTGGTAAATCCT------ i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308413 42 - 4471408 attataggcgagagccacc-acgcccggc---------------------cTCTGGTAAATCTT------ i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5421223 64 + 5549422 atctcgggcatatgcgaccagtgccctacccttttgagccacaagctctgcccAGGTAGATCCT------ i otoGar3.GL873654 I 111 C 0 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e micMur3.chr22 3919895 281 - 30143674 I e dasNov3.JH563638 269840 180 + 643850 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563056 0 - 122678785 C a score=556712.000000 s hg38.chr19_GL383574v1_alt 22002 55 + 155864 TTTAATAGCCCTGGTGTTGGGACAAATCTTATACCTGGG-TAGGGAACCTTTTGAT s panTro5.chr19 36080830 55 + 61309027 TTTAATAGCCCTGGTGTTGGGACAAATCTTATACCTGGG-TAGGGAACCTTTTGAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832804 55 + 64411610 TTTAATAGCCCTGGTGTTGGGACAAATCTTATACCTGGG-TAGGGAACCTTTTGAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250597 55 - 8369475 TTTAATAGCCCTGGTGTTGGGACAAATCTTATACCTGGG-TAGGGAACCTTTTGAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845611 55 - 106955855 TTTAATAGCCCTGGTGTTGGGATAAATCTTATACCTGGG-TAGGGAACCTTTTGAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153818 55 + 53671032 TTTACTAGCCCTGGCGTTGGGACAAATCTTATACCTGAG-TAGGGAACCTTTTGAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606681 55 + 59248254 TTTACTAGCCCTGGCGTTGGGACAAATCTTATACCTGAG-TAGGGAACCTTTTGAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475073 55 - 13342542 TTTACTAGCCCTGGCGTTGGGACAAATCTTATACCTGAG-TAGGGAACCTTTTGAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405573 55 + 7714307 TTTACTAGCCCTGGCGTTGGGACAAATCTTATATCTGAG-TAGGGAACCTTTTGAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213385 55 + 50890351 TTTACTAGCCCTGGCGTTGGGACAAATCTTATACCTGGC-TAGGGAACCTTTTGAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826937 55 - 2385121 TTTACTAGCCCTGGCGTTGGGACAAATCTTATACCTGAG-TAGGGAACCTTTTGAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272070 55 + 4274983 TTTACTAGTCTTGGCGTTGGGGAAAATCTTATACCTGGA-TAGGGAACCTTTTGAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28503900 53 + 49145316 TTTAACAGCCCTAGTACTGGAACAAATTTTACACCTGGG-TAGGGAACC--TTGAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346325 53 + 8899380 TTTAACAGCCCTAGTGTTGGGACAAATTTTACACCTAGG-TAGGGAACC--TTGAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559017 53 - 2680843 TTTAACAGCCCTAGCGTTGGGACAGATTTTACACCTGGG-TAGGGAACC--TTGAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308455 52 - 4471408 TTTAACAGCCCTAGTGTTGGGACAAATTTTACACCTGGG-TAGGG-ACC--TTGAT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5421287 45 + 5549422 TTTAATAGCTCTAAAGTTGGGAC--ATCTTAC---------AGGGAGAGTCTTTAT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4563056 56 - 122678785 TTTAATAACACTTGTGTTGGGACAGATTGTATACCTGAGTTACGGAGTCTTTTTTT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e micMur3.chr22 3919895 281 - 30143674 I e dasNov3.JH563638 269840 180 + 643850 I e mm10.chr7 111053095 2304 - 145441459 I a score=92939.000000 s hg38.chr19_GL383574v1_alt 22057 9 + 155864 GTTACAGAA s panTro5.chr19 36080885 9 + 61309027 GTTATAGAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832859 9 + 64411610 GTTATAGAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250652 9 - 8369475 GTTATAGAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845666 9 - 106955855 GTTATAGAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153873 9 + 53671032 GTTTTAGAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606736 9 + 59248254 GTTTTAGAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475128 9 - 13342542 GTTTTAGAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405628 9 + 7714307 GTTTTAGAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213440 9 + 50890351 GTTTTAGAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 826992 9 - 2385121 GTTTTAGAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272125 9 + 4274983 GTTATAGAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28503953 9 + 49145316 GTTATAGAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346378 9 + 8899380 GCTATAGAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559070 9 - 2680843 GTTGTAGAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308507 9 - 4471408 GTTATAGAA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5421332 9 + 5549422 GTTACAGAA i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e micMur3.chr22 3919895 281 - 30143674 I e dasNov3.JH563638 269840 180 + 643850 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563112 0 - 122678785 C a score=1005036.000000 s hg38.chr19_GL383574v1_alt 22066 93 + 155864 CTGTACACCATAAAGGAGTAGTATGAGA------------------tggtgatagttgcacaactctgcaaatttgctgaagatcattgaat--tatacactttttaaaatca s panTro5.chr19 36080894 93 + 61309027 CTGTACACCATAAAGGAGTAGTacgaga------------------tggtgatagttgcacaactctgcaaatttgctgaagatcattgaat--tatacactttttaaaatca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832868 93 + 64411610 CTGTACACCATAAAGGAGTAGTacgaga------------------tggtgatagttgcacaactctgcaaatttgctgaagatcattgaat--tatacactttttaaaatca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250661 93 - 8369475 CTGTACACCATAAAGGAGTAGTACGAGA------------------tggtgatagttgcacaactctgcaaatttgctgaagatcattgaat--tacacactttttaaaatca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845675 93 - 106955855 CTGTACACCATAAAGGAGTAGTACGAGg------------------tggtggtagttgcacaactctgcaaatttgctgaagatcattgaat--tatacactttttaaaatCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153882 93 + 53671032 CTGTACACCATAAAGGAGTAGTACAAGA------------------tggtgatagtttcacagctctgcaaatttgctgaagatcattgaat--tatacactttTTAAAATCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606745 93 + 59248254 CTGTACACCATAAAGGAGTAGTACAAGA------------------tggtgatagtttcacagctctgcaaatttgctgaagatcattgaat--tatacactttTTAAAATCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475137 93 - 13342542 CTGTACACCATAAAGGAGTAGTACAAGA------------------tggtgatagtttcacagctctgcaaatttactgaagatcattgaat--tatacactttTTAAAATCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405637 93 + 7714307 CTGTACACCATAAAGGAGTAGTACACGA------------------tggtgatagttgcacagctctgcagatttgctgaagatcattgaat--tatacactttTTAAAATCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213449 93 + 50890351 CTGTACACCATAAAGGAGTAGTACAAGA------------------tggtgatagttgcacagctctgcaaatttgctgaagatcattgaat--tatagactttTTAAAGTCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827001 93 - 2385121 CTGTACACCATAAAGGAGTAGTACACGA------------------tggtgatagttgcacagctctgcagatttgctgaagatcattgaat--tatacactttTTAAAATCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272134 95 + 4274983 CTGTACACTATAAAGGAGTAGTACAAGA------------------tggtgatagttgcacagctctgcaaatttgctgaagatcattgaattatatatactttttaaaATCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28503962 91 + 49145316 CTGTACACAGTAAGGGAGTAGTACGAGA------------------tggctacagttgcacaactctgcagatttgctgaaaatcattgaat--tatacac--tttgaaATCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346387 91 + 8899380 CAGTACACAGTAAAGGAGTAGTACgagg------------------tggtgatagttgcacaactctgcaaatttgctgaaaatcattaaat--tatacac--tttaaaatcc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559079 91 - 2680843 CTGTACACAGTAAAGGAGCAGTACGAGA------------------tggtaatagttgtacaactctgcaagtttgctggaaatcattgaat--tatacac--tttaaaATCA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308516 91 - 4471408 CTGTACACAGTAAAGGAGTAGTACgagg------------------tggtgatagttgcacaactctgcaaatttgctgaaactcattgaat--tatacac--tttaaaatca i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5421341 111 + 5549422 CTATACACCATAAAAgagatgtatgagatgtcctacaattggattgtggtgatggctgcacaactgtgtacatttactaaaaatatttgaat--tatgcagtttaaaaaATTA i otoGar3.GL873654 C 0 I 476 s dasNov3.JH563638 270020 106 + 643850 CTGCGAGATATGCAAAAGTAGTGTGAGatggtcttcagttgtatcgtagtgatgattgtacaa-tctgtagatttaccaaaaatcattggat--tgtacacttt----aGTTA i dasNov3.JH563638 I 180 C 0 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e micMur3.chr22 3919895 281 - 30143674 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563112 0 - 122678785 C a score=44624.000000 s hg38.chr19_GL383574v1_alt 22159 4 + 155864 ccaa s panTro5.chr19 36080987 4 + 61309027 ccaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832961 4 + 64411610 ccaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250754 4 - 8369475 ccaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845768 4 - 106955855 CCAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153975 4 + 53671032 CCAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606838 4 + 59248254 CCAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475230 4 - 13342542 CCAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405730 4 + 7714307 CCAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213542 4 + 50890351 CCAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827094 4 - 2385121 CCAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272229 4 + 4274983 CCAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28504053 4 + 49145316 CCAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346478 4 + 8899380 ccaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559170 4 - 2680843 CCGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308607 4 - 4471408 ccaa i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 270126 4 + 643850 ACAG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e micMur3.chr22 3919895 281 - 30143674 I e otoGar3.GL873654 5421452 476 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563112 0 - 122678785 C a score=13600.000000 s hg38.chr19_GL383574v1_alt 22163 1 + 155864 g s panTro5.chr19 36080991 1 + 61309027 g i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832965 1 + 64411610 g i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250758 1 - 8369475 g i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30153979 1 + 53671032 G i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606842 1 + 59248254 G i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475234 1 - 13342542 G i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405734 1 + 7714307 G i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213546 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827098 1 - 2385121 G i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272233 1 + 4274983 G i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28504057 1 + 49145316 G i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346482 1 + 8899380 g i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559174 1 - 2680843 G i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308611 1 - 4471408 g i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5421928 1 + 5549422 G i otoGar3.GL873654 I 476 C 0 s dasNov3.JH563638 270130 1 + 643850 G i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e micMur3.chr22 3919895 281 - 30143674 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563112 0 - 122678785 C e nomLeu3.chr10 63845772 0 - 106955855 C a score=71241.000000 s hg38.chr19_GL383574v1_alt 22164 6 + 155864 tctaat s panTro5.chr19 36080992 6 + 61309027 tctaat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832966 6 + 64411610 tctaat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250759 6 - 8369475 tctaat i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30153980 6 + 53671032 TCTAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606843 6 + 59248254 TCTAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475235 6 - 13342542 TCTAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405735 6 + 7714307 TCTAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213547 6 + 50890351 TCTAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827099 6 - 2385121 TCTAAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272234 6 + 4274983 TCTAAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28504058 6 + 49145316 TCTAAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346483 6 + 8899380 tctaat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559175 6 - 2680843 TCTAAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308612 6 - 4471408 tctaat i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3920176 6 - 30143674 tctaaa i micMur3.chr22 I 281 C 0 s otoGar3.GL873654 5421929 6 + 5549422 TCTATA i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 270131 6 + 643850 TCTACT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517277 290 + 2501019 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563112 0 - 122678785 C e nomLeu3.chr10 63845772 0 - 106955855 C a score=130696.000000 s hg38.chr19_GL383574v1_alt 22170 14 + 155864 ---tttaAAAGTAGTAT s panTro5.chr19 36080998 14 + 61309027 ---tttaAAAGTAGTAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832972 14 + 64411610 ---tttaAAAGTAGTAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250765 14 - 8369475 ---tttaAAAGTAGTAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845772 6 - 106955855 -----------TAGTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30153986 14 + 53671032 ---TTTAAAAGTAGTGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606849 14 + 59248254 ---TTTAAAAGTAGTAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475241 14 - 13342542 ---TTTAAAAGTAGTAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405741 14 + 7714307 ---TTTAAAAGTAGTAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213553 14 + 50890351 ---TTTAAAAGTAGTAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827105 14 - 2385121 ---TTTAAAAGTAGTAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272240 14 + 4274983 ---TTTAAAAGTGGTAT i colAng1.NW_012111697v1 C 0 I 330 s calJac3.chr22 28504064 11 + 49145316 ---TTTAAAAGTGT--- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346489 11 + 8899380 ---tttaAAAGTAT--- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559181 11 - 2680843 ---TTTAAAAGTAT--- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308618 11 - 4471408 ---tttaAAAGTAT--- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3920182 14 - 30143674 ---tttaaaagtagtat i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 517567 14 + 2501019 ---TTTAAAAGTAGTAT i proCoq1.NW_012149263v1 I 290 C 0 s otoGar3.GL873654 5421935 14 + 5549422 ---TTTAAAAGTAGTAT i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 270137 17 + 643850 TAAAAAAAAAATAGTCT i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563112 0 - 122678785 C a score=940698.000000 s hg38.chr19_GL383574v1_alt 22184 72 + 155864 GAAAAACCAGGGAGTACCCCCACATTTCCCTCTTCACCTTG-TGAAACATTATGCAGTGACACATTACCTCAT- s panTro5.chr19 36081012 72 + 61309027 GAAAAACCAGGGAGTACCCCCACATTTCCCTCTTCACCTTG-TGAAACATTATGCAGTGACACATTACCTCAT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39832986 72 + 64411610 GAAAAACCAGGGAGTACCCCCACATTTCCCTCTTCACCTTG-TGAAACATTATGCAGTGACACATTACCTCAT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250779 72 - 8369475 GAAAAACCAGGGAGTACCCCCACATTTCCCTCTTCACCTTG-TGAAACATTATGCAGTGACACATTACCTCAT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845778 72 - 106955855 GAAAAACCAGGGAGTACCCCCACATTTCCCTCTTCACCTTG-TGAAACATTGTGCTGTGACACAGTACCTCAT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154000 72 + 53671032 GAAAAACCAGGGAGTACCCCCACATTTCCCTCTTTACCTTG-TGAAACATTGTATTATGACACATTACCTCAT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606863 72 + 59248254 GAAAAACCAGGGAGTACCCCCACATTTCCCTCTTTACCTTG-TGAAACATTGTATTATGACACATTACCTCAT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475255 72 - 13342542 GAAAAACCAGGGAGTACCCCCACATTTCCCTCTTTACCTTG-TGAAACATTGTATTATGACACATTACCTCAT- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405755 72 + 7714307 GAAAAACCAGGGAGTACCCCCACATTTCCCCCTTTACCTTG-TGAAACATTGTATTATGACACATTACCTCAT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213567 72 + 50890351 GAAAAACCAGGGAGTACCCCGACATTTCCCTGTTTACCTTG-TGAAACATTGTATTATGACACATTACCTCAT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827119 72 - 2385121 GAAAAACCAGGGAGTACCCCCACATTTCCCTCTTTACCTTG-TGAAACATTGTATTATGACACATTACCTCAT- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272584 72 + 4274983 GAAAAATCAGGGAGTACCCCCACATTTCCCTCTTCACCTTG-TGAAACATTGTATTGTGACACATTACCTCAT- i colAng1.NW_012111697v1 I 330 C 0 s calJac3.chr22 28504075 72 + 49145316 GAAAAACCAGGGAGTACCCCTAAATTTCCCTGTTCACCTTG-TGAAACATTGTGTTGTGACACATTACCTCAT- i calJac3.chr22 C 0 I 333 s saiBol1.JH378197 5346500 72 + 8899380 GAAAAACCAGGGAGTACCCCTAAATTTCCCTGTTCACCTTG-TGAAACATTGTGTTGTGACACATTACCTCAT- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559192 72 - 2680843 GAAAAACCAGGGGGTACCCATAAATTTCCTTGTTCACCTTG-TGAAACATTGTGTTGTGACACATTACCTCAT- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308629 71 - 4471408 GAAAAACCAGGGAGTACCTCTAAATTTCCCTGTTCACCTTG-TGAAACATTGTATTG-GACACATTACCTCAT- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3920196 71 - 30143674 gagaaACCAGAGAGCACCCCAAAACTTTCCTC-TTGCCTTG-TGAAACATTGTCTTATGACACATTACCTCAT- i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 517581 72 + 2501019 GAAAAACCAGAGAGCACCCCAAAACTTTCCTCTTTGCCTTG-TGACACGTTGTCTTATGACACATTACTTCAT- i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5421949 66 + 5549422 GAAAAACCAGAGACTACCCCAAATCTTCCCTT-TTGCCTTC-AGAAACA-----TCATGACACATTCTCTCAT- i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 270154 60 + 643850 -------GAGGGAGTACCCCGAACTTCCCCGATTTGCTTTGTTAAAACATTGT-------CTCATTAACTTCTC i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563112 0 - 122678785 C a score=95241.000000 s hg38.chr19_GL383574v1_alt 22256 8 + 155864 TAAAACAC s panTro5.chr19 36081084 8 + 61309027 TAAAACAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833058 8 + 64411610 TAAAACAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250851 8 - 8369475 TAAAACAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845850 8 - 106955855 TAAAACAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154072 8 + 53671032 AAAAACAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606935 8 + 59248254 AAAAACAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475327 8 - 13342542 AAAAACAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405827 8 + 7714307 AAAAACAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213639 8 + 50890351 TAAAACAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827191 8 - 2385121 AAAAACAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272656 8 + 4274983 TAAAACAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28504480 8 + 49145316 TAAAACAA i calJac3.chr22 I 333 C 0 s saiBol1.JH378197 5346572 8 + 8899380 TAAAACAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559264 8 - 2680843 TAAAACAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308700 8 - 4471408 TAAAACAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3920267 8 - 30143674 TAAAACAT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 517653 8 + 2501019 TAAAGCAC i proCoq1.NW_012149263v1 C 0 I 55 s otoGar3.GL873654 5422015 8 + 5549422 TAAAGCAC i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 270214 8 + 643850 CAGAACTA i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563112 0 - 122678785 C a score=87503.000000 s hg38.chr19_GL383574v1_alt 22264 6 + 155864 CTGTAG s panTro5.chr19 36081092 6 + 61309027 CTGTAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833066 6 + 64411610 CTGTAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250859 6 - 8369475 CTGTAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845858 6 - 106955855 CTGTAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154080 6 + 53671032 CTGTAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606943 6 + 59248254 CTGTAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475335 6 - 13342542 CTGTAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405835 6 + 7714307 CTGTAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213647 6 + 50890351 CTGTAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827199 6 - 2385121 CTGTAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272664 6 + 4274983 CTGTAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28504488 6 + 49145316 CTGTAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346580 6 + 8899380 CCGTAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559272 6 - 2680843 CTGTAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308708 6 - 4471408 CTGTAG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3920275 6 - 30143674 CTGTAG i micMur3.chr22 C 0 I 49 s otoGar3.GL873654 5422023 6 + 5549422 CTATAG i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 270222 6 + 643850 CTTCAG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517661 55 + 2501019 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563112 0 - 122678785 C a score=189659.000000 s hg38.chr19_GL383574v1_alt 22270 37 + 155864 ---ACTTGGCGG-----------------------TTAGAAATCGGCTATA-----GGATGTATGATG------------------------ s panTro5.chr19 36081098 37 + 61309027 ---ACTTAGCGC-----------------------TTAGAAATCGGCTATA-----GGATGTATGATG------------------------ i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833072 37 + 64411610 ---ACTTAGCGC-----------------------TTAGAAATCGGCTATA-----GGATGTATGATG------------------------ i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250865 37 - 8369475 ---ACTTAGCGC-----------------------TTAGAAATCGGCTATA-----GGATGTATGATG------------------------ i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845864 33 - 106955855 ---ACTTAGCTC-----------------------TTAGAAATCCACTATA-----GGATGTAT---------------------------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154086 45 + 53671032 ---ACTTAGCGCTTCA-----------GTGTCTTTTTAGAAATCCACTATA-----GGATGCAT---------------------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606949 45 + 59248254 ---ACTTAGCGCTTCA-----------GTGTCTTTTTAGAAATCCACTATA-----GGATGCAT---------------------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475341 45 - 13342542 ---ACTTAGCGCTTCA-----------GTGTCTTTTTAGAAATCCACTATA-----GGATGCAT---------------------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405841 45 + 7714307 ---ACTTAGCGCTTCA-----------GTGTCTTTTTAGAAATCCACTATA-----GGATGCAT---------------------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213653 45 + 50890351 ---ACTTAGCGCTTCA-----------GTGTCTTTTTAGAAATCCACTATA-----GAATGCGT---------------------------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827205 45 - 2385121 ---ACTTAGCGCTTCA-----------GTGTCTTTTTAGAAATCCACTATA-----GGATGCAT---------------------------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272670 45 + 4274983 ---ACTTAGCGCTTCA-----------GTGTCTTTTTAGAAATCCACTATA-----GGATACAT---------------------------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28504494 50 + 49145316 ---GCTTAGGGCTTTG-----------TCATCTTTTTAGACATCCACTATACTTGAGGATGTAT---------------------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346586 42 + 8899380 ---GCTTAGGGCTTTG-----------TCGTCTTTTTAGACATCCGCTATACT--------TAT---------------------------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559278 50 - 2680843 ---GCTTAGGGCTTTG-----------TCGTCTTTTTAGACATCCGCTATACTTGAGGAGGTAT---------------------------- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308714 50 - 4471408 ---GCTTAGGGCTTTG-----------TCGTCTTTTTAGACATCCGCTATACTTGAGGATGTGT---------------------------- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5422029 49 + 5549422 ----GTTAGTGCTTTA-----------TCATCTATTTACAAATGTACTGTATTTCAGGATGCAT---------------------------- i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 270228 80 + 643850 GCTGCATGACGGtttgtttttatttacttgtttgttttgatttttttcttt--------tgtgt----tttttctctcttttatttcttttt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517661 55 + 2501019 I e micMur3.chr22 3920281 49 - 30143674 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563112 0 - 122678785 C a score=635781.000000 s hg38.chr19_GL383574v1_alt 22307 52 + 155864 -------GATGGTA-TTTGGTGTTTATT-------AAAGACTTTCCCAGTGATGCTTCTTAAGTAAC s panTro5.chr19 36081135 52 + 61309027 -------GATGGTA-TTTGGTGTTTATT-------AAAGACTTTCCCAGTGATGCTTCTTAAGTAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833109 52 + 64411610 -------GATGGTA-TTTGGTGTTTATT-------AAAGACTTTCCCAGTGATGCTTCTTAAGTAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250902 51 - 8369475 -------GATGGTA-TTTGGTGTTTATT-------AAAGACTTTCCCAGTGATGCTTCTTAGG-AAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845897 52 - 106955855 -------GATGGTA-TTTGGTGTTTATT-------AAAGACTTTCCCAGTGATGCTTCTTAAGTAAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154131 48 + 53671032 -------GATGGTA-TTTGGTGTTT-----------AAGACTTTCCCAGTGATGTTTCTTAAGTAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34606994 48 + 59248254 -------GATGGTA-TTTGGTGTTT-----------AAGACTTTCCCAGTGATGTTTCTTAAGTAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475386 48 - 13342542 -------GATGGTA-CTTGGTGTTT-----------AAGACTTTCCCAGTGATGTTTCTTAAGTAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405886 48 + 7714307 -------GATGGTA-TTTGGTGTTT-----------AAGACTTTCCCAGTGATGTTTCTTCAGTAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213698 48 + 50890351 -------GATGGTA-TTTGGTGTTT-----------AAGACTTTCCCAGTGATGTTTCTTAAGTAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827250 48 - 2385121 -------GATGGTA-TTTGGTGTTT-----------AAGACTTTCCCAGTGATGTTTCTTAAGTAAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272715 52 + 4274983 -------GATGATG-TTTGGTGTTTATT-------AAAGACTTTCCCAGTGATGTTTCTTAACTAAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28504544 52 + 49145316 -------GATGGTG-TTTAGTGGTTATT-------AAAGACTTTCCCAGTGATACTTCTTAAGTAAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346628 52 + 8899380 -------GATGGTA-TTTAGTGGTTATT-------AAAGACTTTCCCAGTGATGCTTCCTAAGTAAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559328 52 - 2680843 -------GATGGTA-TTTAGCGGTTATT-------AAAGACTTTCCCAGTGATGCTTCTTAAGCAAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308764 52 - 4471408 -------GATGGTA-TTTAGTGGTTATT-------AAAGACTTTCCCAGTGATGCTTCTTAAGTAAC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3920330 52 - 30143674 -------GATGGTA-TTTAGTGGTTATT-------AAAGACTTGCCCAGTGATGCTTCTTAAATAAC i micMur3.chr22 I 49 C 0 s proCoq1.NW_012149263v1 517716 52 + 2501019 -------GATGGTA-TTTAGTGGTTATT-------AAAGACTTGCCCAGTGATGCTTCTTAAATAAC i proCoq1.NW_012149263v1 I 55 C 0 s otoGar3.GL873654 5422078 53 + 5549422 -------GATCATA-TTTGGTGGTTATTA------AAAGACTTGCCCAGTGATATTTCCTAAATAAC i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 270308 67 + 643850 atttGAATATTGTGTTTTAGTGATGGTTAAAGAGTAGAGACGTGTGCAATGATGCTTCTTAATTCAG i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563112 0 - 122678785 C a score=135378.000000 s hg38.chr19_GL383574v1_alt 22359 9 + 155864 TTAGTTTTT s panTro5.chr19 36081187 9 + 61309027 TTAGTTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833161 9 + 64411610 TTAGTTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250953 9 - 8369475 TTAGTTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845949 9 - 106955855 TTAATTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154179 9 + 53671032 TTAGTTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34607042 9 + 59248254 TTAGTTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475434 9 - 13342542 TTAGTTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405934 9 + 7714307 TTAGTTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213746 9 + 50890351 TTAGTTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827298 9 - 2385121 TTAGTTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272767 9 + 4274983 TTAGTTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28504596 9 + 49145316 TTAGTTTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346680 9 + 8899380 TTAGTTTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559380 9 - 2680843 TTAGTTTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308816 9 - 4471408 TTAGTTTTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3920382 9 - 30143674 TTAGTTTTT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 517768 9 + 2501019 TTAGTTTTT i proCoq1.NW_012149263v1 C 0 T 3211 s dasNov3.JH563638 270375 9 + 643850 TAAGTTTTT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5422131 0 + 5549422 C e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563112 0 - 122678785 C a score=73370.000000 s hg38.chr19_GL383574v1_alt 22368 6 + 155864 GCTTGG s panTro5.chr19 36081196 6 + 61309027 GCTTGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833170 6 + 64411610 GCTTGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250962 6 - 8369475 GCTTGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845958 6 - 106955855 GCTTGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154188 6 + 53671032 GCTTGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34607051 6 + 59248254 GCTTGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475443 6 - 13342542 GCTTGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405943 6 + 7714307 GCTTGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213755 6 + 50890351 GCTTGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827307 6 - 2385121 GCTTGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272776 6 + 4274983 GCTTGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28504605 6 + 49145316 GATTGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346689 6 + 8899380 GATTGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559389 6 - 2680843 GATTGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308825 6 - 4471408 GATTGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3920391 6 - 30143674 GCTTGG i micMur3.chr22 C 0 I 234 s dasNov3.JH563638 270384 6 + 643850 GCATGG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e otoGar3.GL873654 5422131 0 + 5549422 C e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563112 0 - 122678785 C a score=11504.000000 s hg38.chr19_GL383574v1_alt 22374 1 + 155864 C s panTro5.chr19 36081202 1 + 61309027 C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833176 1 + 64411610 C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250968 1 - 8369475 C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845964 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154194 1 + 53671032 C i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34607057 1 + 59248254 C i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475449 1 - 13342542 C i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405949 1 + 7714307 C i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213761 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827313 1 - 2385121 C i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272782 1 + 4274983 C i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28504611 1 + 49145316 C i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346695 1 + 8899380 C i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559395 1 - 2680843 C i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308831 1 - 4471408 C i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 270390 1 + 643850 T i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920397 234 - 30143674 I e otoGar3.GL873654 5422131 0 + 5549422 C e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563112 0 - 122678785 C a score=709213.000000 s hg38.chr19_GL383574v1_alt 22375 95 + 155864 CTTATTTTGAATTTATTTT-------------TATATTTTTTATACAATAGTTACTTAGCTGTATAGT------------GTTTTTCTGGCTTTTTGAAATTAT------GAAAAAGCCTCTCTTT s panTro5.chr19 36081203 95 + 61309027 CTTATTTTGAATTTATTTT-------------TATATTTTTTATACAATAGTTACTTAGCTGTATAGT------------GTTTTTCTGGCTTTTTGAAATTAT------GAAAAAGCCTCTCTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833177 95 + 64411610 CTTATTTTGAATTTATTTT-------------TATATTTTTTATACAATAGTTACTTAGCTGTATAGT------------GTTTTTCTGGCTTTTTGAAATTAT------GAAAAAGCCTCTCTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6250969 95 - 8369475 CTTATTTTGAATTTATTTT-------------TATAATTTTTATACAATAGTTACTTAGCTGTATAGT------------GTTTTTCTGGCTTTTTGAAATTAT------GAAAAAGCCTCTCTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63845965 95 - 106955855 CTTATTTTGAATTTATTTT-------------TATATTTTTTATACAATAGTTATTTAGCTGTATAGT------------GTTTTTCTGGTTTTATGAAATTAT------GAAAAAGCCTCTCTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154195 97 + 53671032 CTTATTTTGAATTTATTTT-------------TATATTTTTTATATAA----TATTTAGCTGTATAGT------------GTTTTTCTGGCTTTATGCAATTATAAAAAAAAAAAAGCCTGTCTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34607058 99 + 59248254 CTTATTTTGAATTTATTTT-------------TATATTTTTTATATAATAGTTATTTAGCTGTATAGT------------GTTTTTCTGGCTTTATGCAATTAT--AAAAAAAAAAGCCTGTCTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475450 100 - 13342542 CTTATTTTGAATTTATTTT-------------TATATTTTTTATATAATAGTTATTTAGCTGTATAGT------------GTTTTTCTGGCTTTATGCAATTAT-AAAAAAAAAAAGCCTGTCTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5405950 97 + 7714307 CTCattttgaatttatttt-------------tatattttttatataatagttATTTAGCTGTATAGT------------GTTTTTCTGGCTTTATGCAATTAT----TAAAAAAAGCCTGTCTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213762 99 + 50890351 CTTATTTTGAATTTATTTT-------------TATATTTTTTGTATAATAGTTATTTAGCTGTATAGT------------GTTTTTCTGGCTTTATGCAATTAT--AAAAAAAAAAACCTGTCTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827314 97 - 2385121 CTCattttgaatttatttt-------------tatattttttatataatagttATTTAGCTGTATAGT------------GTTTTTCTGGCTTTATGCAATTAT----TAAAAAAAGCCTGTCTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272783 96 + 4274983 CTTATTTTGAATTTATTTT-------------TATATTTTTTATATAATAGTTATTTAGCTGTATAGT------------GTTTTTCTGGCTTTATGCAATTAT-----AAAAAAAGCCTGTCTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28504612 78 + 49145316 CTTATTTTTTATTT----------------------TTT----AATAGTAGATATTTAGCTGTGTAGT------------ATTTTTCTGGCTTTATGAAATTAT------GAAAAAGCCTC----T i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346696 85 + 8899380 Cttatttttaattt----------------------tttttaataCAGTAGATATTTAGCTGTGTAGTG--------TTAGTTTTTCTGGCTTTATGAAATTAT------GAAAAAGCCTC----- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559396 86 - 2680843 CTTATTTTTAATTT----------------------TTTTAAATACAGTAGATATTTAGCTGTGTAGTG--------TTAGTTTTTCTGGCTTTATGAAATCAT------GAAAAAGCCTC----T i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308832 86 - 4471408 CTTATTTTTAATTT----------------------TTTTTAATACAGTAGATATTTAGCTGTGTAGTG--------TTAGTTTTTCTGGCTTTATGAAATTAT------GAAAATGCCTC----T i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4563112 96 - 122678785 TTTATCTTAAGTTTCTTT------------------TCCACTGCCCCATAGATATTTAGCTGTATAGTG------TCTTAGTTTTTATGGCTTTATGAAGTTAT------CAAGAAGACTTTCTTT i canFam3.chr1 C 0 I 233 s dasNov3.JH563638 270391 100 + 643850 CTTGTTTTTAAATTACTTTATCTTAAGTTTCATTGTTTTTGTTTTTAACAGGTGGCTATTTTTGTAGCATTGTGGTTTTTATTTTTATGAC--TGTGATATT------------------------ i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920397 234 - 30143674 I e otoGar3.GL873654 5422131 0 + 5549422 C e mm10.chr7 111053095 2304 - 145441459 I a score=681332.000000 s hg38.chr19_GL383574v1_alt 22470 83 + 155864 ATGAAATTATGAAAAGTGCTGGGTGAGAGCCAGATATGGGTTGAAAATA--ATTTCTCATTAAAGTGGTTTAATAAA-TTTGTTTT-- s panTro5.chr19 36081298 83 + 61309027 ATGAAATTATGAAAAGTGCTGGGTGAGAGCCAGATATGGGTTGAAAATA--ATTTCTCATTAAAGTGGTTTAATAAA-TTTGTTTT-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833272 83 + 64411610 ATGAAATTATGAAAAGTGCTGGGTGAGAGCCAGATATGGGTTGAAAATA--ATTTCTCATTAAAGTGGTTTAATAAA-TTTGTTTT-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6251064 83 - 8369475 ATGAAATTATGAAAAGTGCTGGGTGAGAGCCAGATATGGGTTGAAAATA--ATTTCTCATTAAAGTGGTTTAATAAA-TTTGTTTT-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63846060 83 - 106955855 ATGAAATTATGAGAAGTGCTGGGTGAGAGCCAGATATGGGTTGAAAATA--ATTTCTCATTAAAGTGGTTTAATAAA-TATTTTTT-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154292 81 + 53671032 ATGAAATTATGAAAAGTGCTGGGTGAGAGCCAGATATGGGTTGAAAATA--ATTTCTCATTAAAGTGGTTTAATACA-TT--TTTT-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34607157 81 + 59248254 ATGAAATTATGAAAAGTGCTGGGTGAGAGCCAGATATGGGTTGAAAATA--ATTTCTCATTAAAGTGGTTTAATACA-TT--TTTT-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475550 82 - 13342542 ATGAAATTATGAAAAGTGCTGGGTGAGAGCCAGATATGGGTTGAAAATA--ATTTCTCATTAAAGTGGTTTAATACATTT--TTTT-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5406047 81 + 7714307 ATGAAATTATGAAAAGTGCTGGGTGAGAACCAGATATGGGTTGAAAATA--ATTTCTCATTAAAGTGGTTTAATACA-TT--TTTT-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213861 81 + 50890351 ATGAAATTATGAAAAGTGCTGGGTGAGAGCCAGATATGGGTTGAAAATA--ATTTCTCATTAAAGTGGTTTAATACA-TT--TTTT-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827411 81 - 2385121 ATGAAATTATGAAAAGTGCTGGGTGAGAGCCAGATATGGGTTGAAAATA--ATTTCTCATTAAAGTGGTTTAAGACG-TT--TTTT-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272879 80 + 4274983 ATGAAATTATGAAAAGTGTTGGGTGAGAGCCAGATATGGGTTGAAAATA--ATTTC-CATGAAAGTGGTTTAATACA-TT--TTTT-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28504690 82 + 49145316 ATGAAGTTATGAAAAGTGCTGGATCAGAGCCAGATATGGGTTGAAAATA--ATTTCTCATTAAAGTTGTTTAATAAA-TTT-TTTT-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346781 4 + 8899380 ----------------------------------------------------------------------------------TTTT-- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559482 82 - 2680843 ATGAAGTTATGAAAAGTGCTGGATCAGAGCCAGATATGGGTTGAAAATA--ATTTCTCATTAAAGTCGTTTAATAAA-TTT-TTTT-- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 308918 82 - 4471408 ATGAAGTTATGAAAAGTGCTGGATCAGAGCCAGATATGAGTTGAAAATA--ATTTTTCATTAAAGTGGTTTAATAAA-TTT-TTTT-- i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 270491 81 + 643850 AAGAAAATCACTAAAGTTCTTGATGTAAGCCACATAGAAGTTGAAAACAGTATTTCTCATTATAGTTATTTAG-----TT--TTTTAG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920397 234 - 30143674 I e otoGar3.GL873654 5422131 0 + 5549422 C e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563208 233 - 122678785 I a score=181408.000000 s hg38.chr19_GL383574v1_alt 22553 15 + 155864 AAAGTATTGCTTTAC s panTro5.chr19 36081381 15 + 61309027 AAAGTATTGCTTTAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833355 15 + 64411610 AAAGTATTGCTTTAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6251147 15 - 8369475 AAAGTATTGCTTTAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63846143 15 - 106955855 AAAGTATTGTTTTAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154373 15 + 53671032 AAAGTATTGCTTTAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34607238 15 + 59248254 AAAGTATTGCTTTAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475632 15 - 13342542 AAAGTATTGCTTTAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5406128 15 + 7714307 AAAGTATTGCTTTAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29213942 15 + 50890351 AAAGTATTGCTTTAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827492 15 - 2385121 GAAGTATTGCTTTAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2272959 15 + 4274983 AAAGTATTGCTTTAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28504772 15 + 49145316 TAAGTGTTGCTTTGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346785 15 + 8899380 AAAGTGTTGCTTTGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559564 15 - 2680843 AAAGTGTTGCTTTGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 309000 15 - 4471408 AAAGTGTTGCTTTGC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3920631 15 - 30143674 AAAGCATTGTTTTAT i micMur3.chr22 I 234 C 0 s dasNov3.JH563638 270572 15 + 643850 AACGCATTGCTTTAC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e otoGar3.GL873654 5422131 0 + 5549422 C e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4563208 233 - 122678785 I a score=1019798.000000 s hg38.chr19_GL383574v1_alt 22568 83 + 155864 CTAATCTGAATTTAAAAGTGTCTTGCCAGCTTAGTGAC---T---CAATAAGTTGGCTGTG---TTACCTTTATTCCTCACAAAG-AAAAAA-A s panTro5.chr19 36081396 83 + 61309027 CTAATCTGAATTTAAAAGTGTCTTGCCAGCTTAGTGAC---T---CAATAAGTTGGCTGTG---TTACCTTTATTCCTCACAAAG-AAAAAA-A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833370 83 + 64411610 CTAATCTGAATTTAAAAGTGTCTTGCCAGCTTAGTGAC---T---CAATAAGTTGGCTGTG---TTACCTTTATTCCTCACAAAG-AAAAAA-A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6251162 82 - 8369475 CTAATCTGAATTTAAAAGTGTCTTGCCAGCTTAGTGAC---T---CAATAAGTTGGCTGTG---TTACCTTTATTCCTCACAAAG--AAAAA-A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63846158 84 - 106955855 CTAATCTGAATTTAAAGGTGTCTTGCCAGCTTAGTGAC---T---CAATAAGTTGGCTGTG---TTACCTTTATTCCTCACAAAG-AAAAAAGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154388 83 + 53671032 CTAATCTGAATTGAAAGGTGTTTTGCCAGCTTAGTGAC---T---CAATAAGTTGGCTGTG---TTACCTTTATTCCTCACAAAG-AAAAAA-A i rheMac8.chr19 C 0 I 2 s macFas5.chr19 34607253 83 + 59248254 CTAATCTGAATTGAAAGGTGTTTTGCCAGCTTAGTGAC---T---CAATAAGTTGGCTGTG---TTACCTTTATTCCTCACAAAG-AAAAAA-A i macFas5.chr19 C 0 I 2 s macNem1.NW_012011689v1 4475647 83 - 13342542 CTAATCTGAATTGAAAGGTGTCTTGCCAGCTTAGTGAC---T---CAATAAGTTGGCTGTG---TTACCTTTATTCCTCACAAAG-AAAAAA-A i macNem1.NW_012011689v1 C 0 I 2 s cerAty1.NW_012005268v1 5406143 83 + 7714307 CTAATCTGAATTGAAAGGTGTCTTGCCAGCTTAGTGAC---T---CAATAAGTTGGCTGTG---TTACCTTTATTCCTCACAAAG-AAAAAA-A i cerAty1.NW_012005268v1 C 0 I 2 s chlSab2.chr6 29213957 84 + 50890351 CTAATCTGAATTGAAAGGTGTCTTGCCAGCTTAGTGAC---T---CAATAAGTTGGCTGTG---TTACCTTTATTCCTCACAAAGAAAAAAA-A i chlSab2.chr6 C 0 I 2 s manLeu1.NW_012102454v1 827507 83 - 2385121 CTAATCTGAATTGAAAGGTGTCTTGCCAGCTTAGTGAC---T---CAATAAGTTGGCTGTG---TTACCTTTATTCCTCACAAAG-AAAAAA-A i manLeu1.NW_012102454v1 C 0 I 2 s colAng1.NW_012111697v1 2272974 83 + 4274983 CTAATGTGAATTGAAAGGTATCTTGCCAGCTTAGTGAC---T---CAATAAGTTGGCTGTG---TTACCTTTATTCCTCACAAAG-AAAAAA-A i colAng1.NW_012111697v1 C 0 I 2 s calJac3.chr22 28504787 82 + 49145316 CTAATCTGAATTT-AAAGTGTCTTGCCAGTTTAGTGAC---T---CAATAAATTGGCTGTG---CTATCTTCACGCCTCACAAGG-AAAAAA-A i calJac3.chr22 C 0 I 2 s saiBol1.JH378197 5346800 82 + 8899380 CTAATCTGAATTT-AAAGTGTCTTGCCAGTTTAGTGAC---T---CAATAAATTGGCTGTG---CTGTCTTTACTCCTCACAAGG-AAAAAA-A i saiBol1.JH378197 C 0 I 2 s cebCap1.NW_016107633v1 1559579 80 - 2680843 CTAATCTGAATTT---AGTGTCTTGCCAGTTTAGTGAC---T---CAATAAATTGGCTGTG---CTATCTTTACTCCTCACAAGG-AAAAAA-A i cebCap1.NW_016107633v1 C 0 I 2 s aotNan1.NW_018505377v1 309015 83 - 4471408 CTAATCTGAATTT-AAAGTGTCTTGCCAGTTTAGTGAC---T---CAATAAATTGGCTGTG---CTGTCTTTACTCCTCACAAGGAAAAAAA-A i aotNan1.NW_018505377v1 C 0 I 2 s micMur3.chr22 3920646 86 - 30143674 CTAATCTGAATTTAAAAGTGTCTTGCCAACCTAGTGACATAC---CTGTGAGTTGGCTATG---CTACCTTTACTCCTCATAAAG-AAAAAA-A i micMur3.chr22 C 0 I 368 s canFam3.chr1 4563441 89 - 122678785 CTAATCTGAATTTTAAGGTGTCTTGCCAGTTGAATGAC---TTACCATTGAGTTGGCTGTACTTTTTTTTTTACTCCTCACAATG-ACAAAA-A i canFam3.chr1 I 233 I 3 s dasNov3.JH563638 270587 85 + 643850 CTAATCTAAATTTACAGATATCCTCTCAGCTTAGTGAC---TTATCAGTGCGTTGGCTGTG---CTGCATTTAC-CCTCTCAAAG-ACAGTC-C i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e otoGar3.GL873654 5422131 0 + 5549422 C e mm10.chr7 111053095 2304 - 145441459 I a score=477921.000000 s hg38.chr19_GL383574v1_alt 22651 47 + 155864 ATACATT-TGAAAA-------TTTTAAAGTA--------------TTTTTGTTCTTTTTTAAAAACTAC s panTro5.chr19 36081479 47 + 61309027 ATACATT-TGAAAA-------TTTTAAAGTA--------------TTTTTGTTCTTTTTTAAAAACTAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833453 47 + 64411610 ATACATT-TGAAAA-------TTTTAAAGTA--------------TTTTTGTTCTTTTTTAAAAACTAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6251244 47 - 8369475 ATACATT-TGAAAA-------TTTTAAAGTA--------------TTTTTGTTCTTTTTTAAAAACTAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63846242 48 - 106955855 ATACATT-TGAAAA------TTTTTAAAGTA--------------TTTTTGTTCTTTTTTAAAAACTAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154473 48 + 53671032 ATACATT-TGAAAA------TTTTTAGAGTA--------------TTTTTGTTATTTTTTAAAAACTAT i rheMac8.chr19 I 2 C 0 s macFas5.chr19 34607338 48 + 59248254 ATACATT-TGAAAA------TTTTTAGAGTA--------------TTTTTGTTATTTTTTAAAAACTAT i macFas5.chr19 I 2 C 0 s macNem1.NW_012011689v1 4475732 48 - 13342542 ATACATT-TGAAAA------TTTTTAGAGTA--------------TTTTTGTTATTTTTTAAAAACTAT i macNem1.NW_012011689v1 I 2 C 0 s cerAty1.NW_012005268v1 5406228 48 + 7714307 ATACATT-TGAAAA------TTTTTAGAGTA--------------TTTTTGTTATTTTTTAAAAACTAT i cerAty1.NW_012005268v1 I 2 C 0 s chlSab2.chr6 29214043 48 + 50890351 ATACATT-TGAAAC------TTTTTAGAGCG--------------TTTTTGTTATTTTTTAAAAACTGT i chlSab2.chr6 I 2 C 0 s manLeu1.NW_012102454v1 827592 48 - 2385121 ATACATT-TGAAAA------TTTTTAGAGTA--------------TTTTTGTTATTTTTTAAAAACTAT i manLeu1.NW_012102454v1 I 2 C 0 s colAng1.NW_012111697v1 2273059 48 + 4274983 ATACATT-TGAAAA------TTTTTAGAGTA--------------TTTTTGTTATTTTTTAAAAACTAC i colAng1.NW_012111697v1 I 2 C 0 s calJac3.chr22 28504871 48 + 49145316 ATACATT-TGAAAA------TTTCTGAAGTA--------------TTTTCGTTCTTTTTTAAAAACTGT i calJac3.chr22 I 2 C 0 s saiBol1.JH378197 5346884 48 + 8899380 ATACCTT-TGAAAA------TTTCTAAAGTA--------------TTTTTGTTCTTTTTTAAAAACTAT i saiBol1.JH378197 I 2 C 0 s cebCap1.NW_016107633v1 1559661 48 - 2680843 ATACATT-TGAAAA------TTTCTAAAGTA--------------TTTTTGTTCTTTTTTAAAAACTAT i cebCap1.NW_016107633v1 I 2 C 0 s aotNan1.NW_018505377v1 309100 48 - 4471408 ATGCATT-TGAAAA------TTTCTGAAGTA--------------TTTTTGTTCTTTTTTAAAAACTAT i aotNan1.NW_018505377v1 I 2 C 0 s canFam3.chr1 4563533 63 - 122678785 ATACATTCTTAAGG------TTTCTTATGTATTAAATTTAGTCCTTTTTTTTttttttttaaagatttt i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 270672 54 + 643850 ATATGTT-TTTTTGTTTGtttttttaaaaaa--------------ttttttttaattttaaggaggtac i dasNov3.JH563638 C 0 I 65 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920732 368 - 30143674 I e otoGar3.GL873654 5422131 0 + 5549422 C e mm10.chr7 111053095 2304 - 145441459 I a score=533444.000000 s hg38.chr19_GL383574v1_alt 22698 64 + 155864 GAAC----ATATCCTTTTATG-------------------------------------------------------------------------------------CAGGAAC--------------------------------------CCCAAAAGTCTACA---------TTTTAACAACC----------------------CACATTTTAAAAA------AC s panTro5.chr19 36081526 63 + 61309027 GAAC----ATATCCTTTTATG-------------------------------------------------------------------------------------CAGGAAC--------------------------------------CCCAAAAGTCTACA---------TTTTAACAACC----------------------CACATTTTAAAAA-------C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833500 63 + 64411610 GAAC----ATATCCTTTTATG-------------------------------------------------------------------------------------CAGGAAC--------------------------------------CCCAAAAGTCTACA---------TTTTAACAACC----------------------CACATTTTAAAAA-------C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6251291 61 - 8369475 GAAC----ATATCCTTTTATG-------------------------------------------------------------------------------------CAGGAAC--------------------------------------CCC-AAAGTCTACA----------TTTAACAACC----------------------CACATTTTAAAAA-------C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63846290 63 - 106955855 GAAC----ATATCTTTTTATG-------------------------------------------------------------------------------------CAGGAAC--------------------------------------CCCAAAAGCCTACA---------TTTTAACAACC----------------------CACATTTTAAAAA-------C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154521 63 + 53671032 GAAC----ATATCCTTTTATG-------------------------------------------------------------------------------------CAGGAAC--------------------------------------CCCAAAAGTCTACA---------TTTTAACAACC----------------------CACATTTTAAAAA-------C i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34607386 63 + 59248254 GAAC----ATATCCTTTTATG-------------------------------------------------------------------------------------CAGGAAC--------------------------------------CCCAAAAGTCTACA---------TTTTAACAACC----------------------CACATTTTAAAAA-------C i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475780 63 - 13342542 GAAC----ATATCCTTTTATG-------------------------------------------------------------------------------------CAGGAAC--------------------------------------CCCAAAAGTCTACA---------TTTTAACAACC----------------------CACATTTTAAAAA-------C i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5406276 63 + 7714307 GAAC----ATATCCTTTTATG-------------------------------------------------------------------------------------CAGAAAC--------------------------------------CCCAAAAGTCTACA---------TTTTAACAACC----------------------CACATTTTAAAAA-------C i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29214091 63 + 50890351 GAAC----ATATCCTTTTATG-------------------------------------------------------------------------------------CAGGAAC--------------------------------------CCCAAAAGTCTACA---------TTTTAACAACC----------------------CACATTTTAAAAA-------C i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827640 63 - 2385121 GAAC----ATATCCTTTTATG-------------------------------------------------------------------------------------CAGAAAC--------------------------------------CCCAAAAGTCTACA---------TTTTAACAACC----------------------CACATTTTAAAAA-------C i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2273107 63 + 4274983 GAAC----ATATCCTTTTATG-------------------------------------------------------------------------------------CAGGAAC--------------------------------------CCCAAAAGTCTACA---------TTTTAACAACC----------------------CACATTTTTAAAA-------A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28504919 60 + 49145316 GAAC----ATATCCTTTTATG-------------------------------------------------------------------------------------CAGGAAC--------------------------------------CCCAAAAGTCTACA---------CTTT---AACC----------------------CACATTTTAAAAA-------C i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346932 64 + 8899380 GAACATATATATCCTTTTATG-------------------------------------------------------------------------------------CAGGAAC--------------------------------------CCGAGAAGTCTACA---------CTTT---AACC----------------------CACATTTTAAAAA-------C i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559709 60 - 2680843 AAAC----ATATCCTCTTATT-------------------------------------------------------------------------------------CAGGAAC--------------------------------------CCCAGAAGTCTACA---------CTTT---AACC----------------------CACATTTTAAAAA-------C i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 309148 60 - 4471408 GAAC----ATATCCTTTTATG-------------------------------------------------------------------------------------CAGGAAC--------------------------------------CCCAAAAGTCTACA---------CTTT---AACC----------------------CACATTTTAAAAA-------C i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4563596 222 - 122678785 g--t----ttatttattcatgacagacagagagaggcagagacacaggcagagggagaagcaggctccgcacagggagtccgacgcagaactggatcccgggactccaggaacgcgcctgggcggaaggcaggcactaaaccgctgagccacccaggcgtcccTAACTTTAGTCTTTTAAAAATCTTTGAATTCTTATATTCTTTTATACATTTTATACATTACACAT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920732 368 - 30143674 I e dasNov3.JH563638 270726 65 + 643850 I e otoGar3.GL873654 5422131 0 + 5549422 C e mm10.chr7 111053095 2304 - 145441459 I a score=1814062.000000 s hg38.chr19_GL383574v1_alt 22762 194 + 155864 TTTTCAGCAGCTTTTAGAGTC----AGT--------ATTTCATTAGTCTGT----AATAGTTAAATTCATA-----TGACATAATGACATAAAATATAAATTTGTTCTTTGTGTCA-TGACTTGATAAATATATGAATATAGCAGTG-AAAAATTTTTTTAATCATTGAA-TTTATGTTTGTACTCATGGC-TTTGATATTTCATCCCACAT-CATTATA s panTro5.chr19 36081589 194 + 61309027 TTTTCAGCAGCTTTTAGAGTC----AGT--------ATTTCATTAGTCTGT----AATGGTTAAATTCATA-----TGACATAATGACATAAAATATAAATTTGTTCTTTGTGTCA-TGACTTGATAAATATATGAATATAGCAGTG-AAAAATTTTTTTAATCATTGAA-TTTATGTTTGTACTCATGGC-TTTGATATTTCATCCCACAT-CATTATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833563 194 + 64411610 TTTTCAGCAGCTTTTAGAGTC----AGT--------ATTTCATTAGTCTGT----AATAGTTAAATTCATA-----TGACATAATGACATAAAATATAAATTTGTTCTTTGTGTCA-TGACTTGATAAATATATGAATATAGCAGTG-AAAAATTTTTTTAATCATTGAA-TTTATGTTTGTACTCATGGC-TTTGATATTTCATCCCACAT-CATTATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6251352 192 - 8369475 TTGTCAGCAGCTTTTAGAGTC----AGT--------ATTTCATTAGTCTGT----AATAGTTAAATTC--A-----TGACATAATGACATAAAATATAAATTTGTTCTTTGTGTCA-TGACTTGATAAATATATGAATATAGCAGTG-AAAAATTTTTTTAATCATTGAA-TTTATGTTTGTACTCATGGC-TTTGATATTTCATCCCACAT-CATTATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63846353 186 - 106955855 TTTTCAGCAGCTTTTAGAGTC----AAT--------ATTTCATTAGTCTGT----AATAGTTAAATTCAT-------------ATGACATAAAATATAAATTTGTTCTTTGTGTCA-TGACTTGATAAATATATGAATATAGCAGTG-AAAAATTTTTTTAACCATTGAA-TTTATGTTTGTACTCATGGC-TTTGATATTTCATCCCACAT-CATTATA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154584 187 + 53671032 TTTTCAGCAGCTTTTGGAGTC----AGT--------ATTTCATTAGTCTGT----AATAGTTAAATTCAT-------------ATGACATAAAATACAAATTTGTTCTTCGTGTCA-TGACTTGATAAATATTTGAATATAGCAGTGAAAAAAAATTTTTAATCATTGAA-TTTACGTTTGTATTCATGCC-TTTGATATTTCATTCCACAT-CATTATA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34607449 187 + 59248254 TTTTCAGCAGCTTTTGGAGTC----AGT--------ATTTCATTAGTCTGT----AATAGTTAAATTCAT-------------ATGACATAAAATACAGATTTGTTCTTCGTGTCA-TGACTTGATAAATATTTGAATATAGCAGTGAAAAAAAATTTTTAATCATTGAA-TTTACGTTTGTATTCATGCC-TTTGATATTTCATTCCACAT-CATTATA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4475843 181 - 13342542 TTTTCAGCAGCTTTTGGAGTC----AGT--------ATTTCATTAGTCTGT----AATAGTTAAATTCAT-------------ATGACATAAAATACAAATTTGTTCTTCGTGTCA-TGACTTGATACATATTTGAATATAGCAGTGAAAAAAAATTTTTAATCATTGAA-TTTACGTTT------ATGCC-TTTGATATTTCATTCCACAT-CATTATA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5406339 187 + 7714307 TTTTCAGCAGCTTTTGGAGTC----AGT--------GTTTCATTAGTCTGT----AATAGTTAAATTCAT-------------ATGACATAAAATACAAATTTGTTCTTCGTGTCA-TGACTTGATAAATATTTGAATATAGCAGTGAAAAAAAATTTTTAATCATTGAA-TTTATGTTTGTATTCATGCC-TTTGATATTTCATTCCACAT-CATTATA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29214154 187 + 50890351 TTTTCAGCAGCTTTTGGAGTC----AGT--------ATTTCATTAGTCTGT----AATAGTTAAATTCAT-------------ATGACATAAAATATAAATTTGTTCTTCGTGTCA-TGACTTGATAAATATTTGAATATAGCAGTGAAAAAAAATTTTTAATCATTGAA-TTTATGTTTGTATTCATGGC-TTTGATATTTCATCCCACAT-CATTATA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827703 187 - 2385121 TTTTCAGCAGCTTTTGGAGTC----AGT--------ATTTCATTAGTCTGT----AATAGTTAAATTCAT-------------ATGACATAAAATACAAATTTGTTCTTCGCGTCA-TGACTTGATAAATATTTGAATATAGCAGTGAAAAAAAATTTTTAATCATTGAA-TTTATGTTTGTATTCATGCC-TTTGATATTTCATTCCACAT-CGTTATA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2273170 185 + 4274983 -CTTCAGCGGCTTTTGGAGTC----AGT--------ATTTCATTAGTCTTT----AATAGTTAAATTCAT-------------ATGACATAAAATATAAATTTGTTCTTCGTGTCA-TGACTTGATAAATATGTGAATATAGCAGTG-AAAAAAATGTTTAATCATTGAA-TTTATGTTTGTACTCATGGC-TTTGATATTTCATCCCACAT-CATTATA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28504979 189 + 49145316 TTTTAAGCAGCTTT--GAGTCGATAAAT--------ATTTCATTAGTCTGT----AATAGTTAAATTCAT-------------TCGACATAAAATATAAATTTGTTTTTTGTGTCA-TGACTTGATAAATATAGGAATAGGGCAGTA-AAAAAAATTTTTAATCATTGAATTTTATGTTTGAATTCGTGGC-TTTGATATTTCATCCCACAC-CATTATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5346996 186 + 8899380 TTTTAAGCAGCTTT--GAGTCAATAAAT--------ATTTCATTAGTCTGT----AATAATTAAATTCAT-------------TTGACATGAAATATAAATTTGTTTTTTGTGTCA-TGACTTGATAAATATATGAATAGGGCAGTG-AAAAAAA---TTAATCATTGAATTTTATGTTTGTATTCGTGGC-TTTGATATTTCATCTCACAC-CATTATA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559769 186 - 2680843 TTTTAAGCAGCTTT--GAATCAATAAAT--------ATTTCATTAGTCTGT----AATAGTTAAATTCAT-------------TTGACATAAAATATAAATTTGTTTTTTGTGTCA-TAACTTGAT---TATATGAATAGGGCAGTG-AAAAAAATTTTTAATCATTGAATTTTATGTTTGTATTCGTGGC-TTTGATATTTCATCCCACAC-CATTATA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 309208 186 - 4471408 TTTTAAGCAGCTTT--GAGTC---AAAT--------ATTTCATTAGTCTGT----AATAGTTAAATTCAT-------------TTGACATAAAATATAAATTTGTTTTTTGTGTCA-TGACTTGATAAATATATGAATAGGGCAGTG-AAAAAAATTTTTAGTCATTGAATTTTATGTTTGTATTCATGGC-TTTGATATTTCATCCCACAC-CATTATA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4563818 182 - 122678785 TTTTTTTCAGCTTCTAGAGTC----AGTAAACTACAATTTTATTAGTCTGT----AGTAGTTGAATTCAC-----------------------AAACCAGTTTGTTCTT-GTATCA-TGTCTTGATAAATACA--AGCACAGGAGTG-AAAAGTTTTTTTAATCATTGAA-TTTATATCTGTGCTTATGGC-TTTGATAGTTAATCCCACAGACATGATA i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 270791 178 + 643850 cccTCATATGTTTTTAGATTT----TCT--------AAATTATTAGTCTTCTTTAAAAAATTATGAACATATCCTTTTACACAAGAGCATAAAA---ACGCTTATATTTTGTATGACTCACTTTATTAAAACTTG-------------------TTTTTCAATCGCTGAA-TTTATGTCTTTACTTTTGGCTTTTGATACTT------ATAT-CAGTGTG i dasNov3.JH563638 I 65 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920732 368 - 30143674 I e otoGar3.GL873654 5422131 0 + 5549422 C e mm10.chr7 111053095 2304 - 145441459 I a score=39808.000000 s hg38.chr19_GL383574v1_alt 22956 10 + 155864 TG-C-----------tttttct s panTro5.chr19 36081783 10 + 61309027 TG-C-----------tttttct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833757 11 + 64411610 TGTC-----------tttttct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6251544 10 - 8369475 TG-C-----------TTTTTCt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63846539 10 - 106955855 TG-C-----------ttttttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154771 7 + 53671032 TG-C--------------tttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34607636 7 + 59248254 TG-C--------------tttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4476024 10 - 13342542 TG-C-----------ttttttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5406526 9 + 7714307 TG-C------------tttttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29214341 3 + 50890351 TG-C------------------ i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827890 21 - 2385121 TG-Ctttttttttttttttttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2273355 16 + 4274983 TG-C-----TGGGttttttttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28505168 10 + 49145316 TG-C-----------ttttttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5347182 10 + 8899380 TG-C-----------ttttttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559955 10 - 2680843 TG-C-----------ttttttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 309394 10 - 4471408 TG-C-----------ttttttt i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 270969 10 + 643850 TA-C-----------ATTTTCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920732 368 - 30143674 I e otoGar3.GL873654 5422131 0 + 5549422 C e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4564000 2 - 122678785 I a score=26400.000000 s hg38.chr19_GL383574v1_alt 22966 6 + 155864 tttt-------ct s panTro5.chr19 36081793 6 + 61309027 tttt-------ct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833768 6 + 64411610 tttt-------ct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6251554 6 - 8369475 tttt-------ct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63846549 6 - 106955855 tttt-------ct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154778 6 + 53671032 tttt-------tt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34607643 6 + 59248254 tttt-------tg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4476034 6 - 13342542 tttt-------tt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5406535 6 + 7714307 tttt-------tt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29214344 1 + 50890351 ------------t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827911 6 - 2385121 tttt-------tt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2273371 6 + 4274983 tttt-------tt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28505178 6 + 49145316 tttt-------tt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5347192 6 + 8899380 tttt-------tt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559965 10 - 2680843 tttt---tttatt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 309404 13 - 4471408 ttttttttttttt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920732 368 - 30143674 I e dasNov3.JH563638 270979 0 + 643850 C e otoGar3.GL873654 5422131 0 + 5549422 C e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4564000 2 - 122678785 I a score=452479.000000 s hg38.chr19_GL383574v1_alt 22972 66 + 155864 ---------ttttt-ttt----tttctttttgagatggcg-tctcactctgttgcccaggccggagtgcagtggcacaatc s panTro5.chr19 36081799 53 + 61309027 ---------tttt------------------gagatggcg-tctcactctgttgcccaggccggagcgcagtggcacaatc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833774 66 + 64411610 ---------ttttt-ttt----tttctttttgagatggcg-tctcactctgttgcccaggccggagcgcagtggcacaatc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6251560 70 - 8369475 ---------ttttt-tttttcctttctttttgagatggcg-tctcactctgttgcccaggccggagcgcattggcacaatc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63846555 49 - 106955855 ---------tttt------------------gagatggag-t----ctctgttgcctaggccggagctcagtggcacaatc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154784 57 + 53671032 ---------ttttt-ttt-------------gagatggag-tctcactctgttgcccaggccacagtgcagtggcgcaatc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34607649 57 + 59248254 ---------ttttt-ttt-------------gagatggag-tctcactctgttgcccaggccacagtgcagtggcgcaatc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4476040 57 - 13342542 ---------ttttt-ttt-------------gagatggag-tctcactctgttgcccaggccacagtgcagtggtgcaatc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5406541 57 + 7714307 ---------ttttt-ttt-------------gagatggag-tctcactctgttgcccaggccacagtgcagtggcgcaatc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29214345 57 + 50890351 ---------ttttt-ttt-------------gagatggag-tctcactctgttgcccaggccacagtgcagtggcgcaatc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827917 57 - 2385121 ---------ttttt-ttt-------------gagatggag-tctcactctgttgcccaggccacagtgcagtggcgcaatc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2273377 57 + 4274983 ---------tgttt-ttt-------------gaaatggag-tctgactctgttgcccaggcgagagtgcagtggcacaatc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28505184 58 + 49145316 ---------ttttt-aat-------------gagatgaaatttgcactctgttgcccaggctggagtacagtggcaccacc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5347198 58 + 8899380 ---------tttttaaat-------------gagatggaa-tcgcactctgttgcccaggctggaatacagtggcacaatc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1559975 57 - 2680843 ---------ttttt-aat-------------gcgacggaa-tcgcactctgttgccccggctggagtacagtggcacaatc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 309417 57 - 4471408 ---------ttttt-gat-------------gagacagaa-tcgcactctgttgcccaggctagagtacagtggcacaatc i aotNan1.NW_018505377v1 C 0 I 3 s otoGar3.GL873654 5422131 63 + 5549422 ttcttttttttttt-ttt-------------gagacagag-tctcaagctgtcaccctgggtagagtaccttggcatc--- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920732 368 - 30143674 I e dasNov3.JH563638 270979 0 + 643850 C e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4564000 2 - 122678785 I a score=2052204.000000 s hg38.chr19_GL383574v1_alt 23038 233 + 155864 ctggctccctgtaacctctgccttccaagttcaagcaattctcctgcctcagcctcctgagtagctgggattactggcgcgtgccaccacgcttggctaatttttgtattttttagttgagacaggc-tttcaccatattggccaggc---tggtcttgaactcctgacctcaagtgatccacctgcctcagcctcccagaatgccgggattacaggcatg-agccaccgcacc---cggc-- s panTro5.chr19 36081852 233 + 61309027 ctggctccctgtaacctctgccttccaagttcaagcaattctcctgcctcagcctcctgagtagctgggattactggcatgtgccaccacgcttggctaatttttgtattttttagttgagacaggc-tttcaccatattggccaggc---tggtcttgaactcctgacctcaagtgatccacctgcctcggcctcccaaaatgccgggattacaggcatg-agccaccgcacc---cggc-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39833840 233 + 64411610 ctggctccctgtaacctctgccttccaagttcaagcaattctcctgcctcagcctcctgagtagctgggattactggcatgtgccaccacgcttggctaatttttgtattttttagttgagacaggc-tttcaccatattggccaggc---tggtcttgaactcctgacctcaagtgatccacctgcctcggcctcccaaaatgccgggattacaggcatg-agccaccgcacc---cagc-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6251630 233 - 8369475 ctggctccctgtaacctctgccttccaagttcaagcaattctcctgcctcagcctcctgagtagctgggattactggcgcgtgccaccacgcttggctaatttttgtattttttagttgagacaggc-tttcaccatattggccaggc---tggtcttgaactcctgacctcaagtgatccacctgcctcagcctcccaaaatgccgggattacaggcatg-agccaccgcacc---cggc-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63846604 232 - 106955855 ctggctccctgtaacctctgcctcccaagtttaagcaattctcctgcctcagcctcttgagtagctgggattactggcacgtgccaccacgcttggctaatttttgtattttttagttgagacagcc-tttcaccatattggccaggc---tggtcttaaactcctgacctcaagtgatccacctgcctcggcctcccaaaatgctggga-tacaggcatg-agccaccgcacc---cagc-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30154841 233 + 53671032 ctggctccctgtaacctctacctcccaagttcaagcaattctcctgcctcagcctcctgagtagctgggattactggtgcgtgccatcacgcctggctaatttttgtattttttagttgagacaggc-tttcaccatattggccaggc---tggtcttgaattcttgacctcaagtgatccccctgcctcggcctcctaaaatgctgggattacaggcatg-agccactgtacc---cagc-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34607706 233 + 59248254 ctggctccctgtaacctctacctcccaagttcaagcaattctcctgcctcagcctcctgagtagctgggattactggtgcgtgccatcacgcctggctaatttttgtattttttagttgagacaggc-tttcaccatattggccaggc---tggtcttgaattcttgacctcaagtgatccccctgcctcggcctcctaaaatgctgggattacaggcatg-agccactgtacc---cagc-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4476097 233 - 13342542 ctggctccctgtaacctctacctcccaagttcaagcaattctcctgcctcagcctcctgagtagctgggattactggtgcgtgccatcacgcctggctaatttttgtattttttagttgagacaggc-tttcaccatattggccaggc---tggtcttgaattcttgacctcaagtgatccccctgcctcggcctcccaaaatgctgggattacaggcatg-agccactgtacc---cagc-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5406598 233 + 7714307 ctggctccctgtaacctctgcctcccaagttcaagcaattctcctgcctcagcctcctgagtagctgggattactggtgcgtgccatcacgcctggctaatttttgtattttttagttgagacaggc-tttcaccatattggccaggc---cggtcttgaactcttgacctcaggtgatccccctgcctcggcctcccaaaatgctggaattacaggcatg-agccactgtacc---cagc-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29214402 234 + 50890351 ctggctccctgtaacctctgcctcccaagttcaagcaattctcctgcctcagcctcctgagtagctgggattactggtgcgtgccatcacgcctgtctaatttttgtattttttagtcgagacaggcttttcaccatattggccaggc---tgatcttgaactcttgacctcaagtgatgcccctgcctcagcctcccaaaatgctgggattacaggcatg-agccattgtacc---cagc-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 827974 233 - 2385121 ctggctccctgtaacctctgcctcccaagttcaagcaattctcctgcctcagcctcctgagtagctgggattactggtgcgtgccatcacacctggctaatttttgtattttttagttgagacaggc-tttcaccatattggccaggc---cggtcttgaactcttgacctcaggtgatccccctgcctcggcctcccaaaatgctgggattacaggcatg-agccactgtacc---cagc-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2273434 235 + 4274983 ctggctcactacaacctctgcctcccaagttcaagcaattctcctgcctcagcctcctgaatagctgggattactggtgcgtgccatcacgcctggctaatttttgtatttcttagt-gagaaaggc-tttcaccatatcggccaagctggtggtcttggactcttgacctcaagtgatccccctgcctcggcctcccaaaatgctgggattacaggcatg-agccactgtacc---cagc-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28505242 232 + 49145316 ctggctccctgtaatctctgcctcccgggttcaagcaattcttctgcctcagcctcctgagtagctgagattacaggaacatgccaccacacccagctaatttttgcattttttaattgagataggc-tttcaccatattggccaggc---tggtcttcaactcctgacctcaagtgatcagcctgcctccgcctcccaaagtgctgggatta-aggcatg-agccactgcgcc---tggc-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5347256 228 + 8899380 ctggctccctgtaacctctgcctcccaggttcaagcaa---ttctgcctcagcctcctaagtagctgggattataggcacacgccaccacacccagctaa-ttttgtatttttaaattgagataggc-tttcaccgtattggccaggc---tggtcttcaactcctgacttcaggtgatctgcctgcctcggcctccaaaagtgctgggatta-aggcatg-agccactgtgcc---tggc-- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1560032 232 - 2680843 ctggctcccggtaacctctgcctcccaggttcaagcaattcttctgcctcagcctcctgagtagctggcattgcaggcacacgccaccacacccagctaatttttgtattttttaattgagataggc-tttcaccatattggccaggc---tggtcttcaactcctgacctcaagtgatcctcctgccttggcctcccaaagtgttggaatta-aggcacg-aaccactgtgcc---tggc-- i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5422194 216 + 5549422 acagctcacagcaacctcaaagtcttaggcttgagcaattctcttgcctcagccttccaagtaggtggaactataggcacctactgcaatgcctggct-atttttg----ttgccattgtcattgtt-gcttagc---tggcccaggc---cagttcgaacctgccagcct----tggtgcttgtggct-----------agtgctataaccactgtcctgcaggcaccgagccACACAGCAG i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920732 368 - 30143674 I e dasNov3.JH563638 270979 0 + 643850 C e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4564000 2 - 122678785 I e aotNan1.NW_018505377v1 309474 3 - 4471408 I a score=111536.000000 s hg38.chr19_GL383574v1_alt 23271 10 + 155864 TGCTTTTTCT s panTro5.chr19 36082085 10 + 61309027 TGCTTTTTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39834073 10 + 64411610 TGCTTTTTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6251863 10 - 8369475 TGCTTTTTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63846836 10 - 106955855 TGCTTTTTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30155074 10 + 53671032 TGCTTTTTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34607939 10 + 59248254 TGCTTTTTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4476330 10 - 13342542 TGCTTTTTCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5406831 10 + 7714307 TGCTTTTTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29214636 10 + 50890351 TGCTTTTTCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 828207 10 - 2385121 TGCTTTTTCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2273669 10 + 4274983 TCCTTTTTCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28505474 10 + 49145316 cACTTTTTCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5347484 10 + 8899380 cACTTTTTCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1560264 10 - 2680843 cACTTTTTCT i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5422410 10 + 5549422 TGCTTTTTCT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4564002 10 - 122678785 TGCTTTTTTT i canFam3.chr1 I 2 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920732 368 - 30143674 I e dasNov3.JH563638 270979 0 + 643850 C e mm10.chr7 111053095 2304 - 145441459 I e aotNan1.NW_018505377v1 309474 3 - 4471408 I a score=858071.000000 s hg38.chr19_GL383574v1_alt 23281 84 + 155864 TAAGCAACATGAGTTAAATGTGTAACCA--GTTTGGGGAATTTGATTATGTTCGCAAAAACTGACATTATCAAACCTTTATATATT s panTro5.chr19 36082095 84 + 61309027 TAAGCAACGTGAGTTAAATGTGTAACCA--GTTTGGGGAATTTGATTATGTTCGCAAAAACTGACATTATCAAACCTTTATATATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39834083 84 + 64411610 TAAGCAACGTGAGTTAAATGTGTAACCA--GTTTGGGGAATTTGATTATGTTCGCAAAAACTGACATTATCAAACCTTTATATATT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6251873 84 - 8369475 TAAGCAACATGAGTTAAATGTGTAACCA--GTTTGGGGAATTTGATTATGTTTGCAAAAACTGACATTATCAAACCTTTATATATT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63846846 84 - 106955855 TAAGCAACATGAGTTAAACGTGTAACCG--GTTTGGGGAATTTGATTATGTTCGCAAAAACTGACATTATCAAACCTTTATATATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30155084 84 + 53671032 TAAGCAACATGAGTTAAACATGTAACAG--GTTTGGGGAATTTGATTATGCTTGCAAAAACTGACATTATCCAACCTTTATATATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34607949 84 + 59248254 TAAGCAACATGAGTTAAACATGTAACAG--GTTTGGGGAATTTGATTATGCTTGCAAAAACTGACATTATCCAACCTTTATATATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4476340 84 - 13342542 TAAGCAACATGAGTTAAACATGTAACAG--GTTTGGGGAATTTGATTATGCTTGCAAAAACTGACATTATCCAACCTTTATATATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5406841 84 + 7714307 TAAGCAACATGAGTTAAACATGTAACAG--GTTTGGGGAATTTGATTATGCTTGCAAAAACTGACATTATCCAACCTTTATATATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29214646 84 + 50890351 TAAGCAACATGAGTTAAACATGTAACAG--GTTTGAGGAATTTGATTATGTTTGCAAAAACTGACATTATCCAACCTTTATATATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 828217 84 - 2385121 TAAGCAACATGAGTTAAACATGTAACAG--GTTTGGGGAATTTGATTATGCTTGCAAAAACTGACATTATCCAACCTTTATATATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2273679 84 + 4274983 TAAGCAACGAGAGTTAAACATGTAACAG--GTTTGGGGAATTTGATTATGTTTGCAAAAACTGACATTATCCAACCTTTATATATT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28505484 83 + 49145316 TAAGTAGCATGAGTTAAATCTGTAACAG--GTTTGAGGAATTTAATTATGTTTGCAAAAACTGACATTATCAAA-CTTTATATATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5347494 83 + 8899380 TAAGCAGTATGAGTTAAATGTGTAACAG--GTTTGGGGAATTTAATTGTGTTTGCAAAAACTGACATTATCGAA-CTTTACATATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1560274 83 - 2680843 TAAGCAGTATGAGTTAAATGTGTAACAG--GTTTGGGGAATTTAATTATGTTTGCAAAAACTGACATTATCAAA-CTTTATGTATT i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5422420 80 + 5549422 TAGGCAGTATGAGTTAATGTATTAACAG--GGTTTAGGAAT----TTATGTTTGCAAAAACTGGAGTAATCAAATCtttctttctt i otoGar3.GL873654 C 0 I 6496 s canFam3.chr1 4564012 85 - 122678785 TAAGCAGGAGTTATTTAATATTTAATAG-AGATTGAGGGATTTAATTGTGTTTGCAAAAATGGTAGTTATCAAATTTTCGTACCTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 270979 79 + 643850 TAAGCAATATG----TAATGTGCAGCAGCAGTTTGGGGAATTTAATCATGTTTGAAAAACCAG---TTATTAAATCTAGATGTATT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920732 368 - 30143674 I e mm10.chr7 111053095 2304 - 145441459 I e aotNan1.NW_018505377v1 309474 3 - 4471408 I a score=1780017.000000 s hg38.chr19_GL383574v1_alt 23365 194 + 155864 AGTCTACATGATATTATCTAATCGAAAACTACATTATAACTGTCTAGTCAATACTGGACAC--ATTTCAGATTTCAAGATTAGAAGCAAGGAGTTCAATCTTAAAA-T-TTTAA---AATTTACAT--------------------------------------------------------GACTTGTTGAGTAATTCGATATCAGAAAATTTCACCTTCCATTTCAAAAT----TTGAACGAAGAATGGTAGTCTAAAA s panTro5.chr19 36082179 194 + 61309027 AGTCTACATGATATTATCTAATCGAAAACTACATTATAACTGTCTAGTCAATACTGGACAC--ATTTCAGATTTCAAGATTAGAAGCAAGGAGTTCAATCTTAAAA-T-TTTAA---AATTTACAT--------------------------------------------------------GACTTGTTGAGTAATTCGATATCAGAAAATTTCACCTTCCATTTCAAAAT----TTGAACGAAGAATGGTAGTCTAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39834167 194 + 64411610 AGTCTACATGATATTATCTAATCGAAAACTACATTATAACTGTCTAGTCAATACTGGACAC--ATTTCAGATTTCAAGATTAGAAGCAAGGAGTTCAATCTTAAAA-T-TTTAA---AATTTACAT--------------------------------------------------------GACTTGTTGAGTAATTCGATATCAGAAAATTTCACCTTCCATTTCAAAAT----TTGAACGAAGAATGGTAGTCTAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6251957 193 - 8369475 AGTCTACATGATATTATCTAATCGAAAACTACATTATAACTGTCTAGTCAATACTGGACAC--ATTTCAGATTTCAAGATTAGAAGCAAGGAGTTCAATCTTAAAA-T-TTTAA---AATTTACAT--------------------------------------------------------GACTTGTTGAGTAATTCGATATCAGAAAATTTCACCTTCCATTTC-AAAT----TTGAACGAAGAATGGTAGTCTAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63846930 195 - 106955855 ATTCTACATGATATTATCTAATCGAAAACTACATTATAACTGTCTAGTCAATACTGGACACTTATTTCGGATTTCAAGATTAGAAGCAAGGAGTTCAATCTTAAAA-T-TTTAA---AATTCACAT--------------------------------------------------------GACTTGTTGAGTAATTCGATATCAGAAAATTTCA-CTTCCATTTCAAAAT----TTGAACGAAGAATGGTAGTCTAAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30155168 193 + 53671032 ATTCTAC---ATATTATCTAATCAAAAACTACATTATAACTGTCTAGTCAATACTGGACACTTATTACAGATTTCAAGATTAGAAGCGAGGAGTTCAGTCTTAAAA-A-TTTTA---AATTTACAT--------------------------------------------------------GACTGGTCGAGTAATTCGATATCAGAAAATTTCACCTTCCATTTCAAAAT----TTGAATGAAGAATGGTAGTCTAAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34608033 193 + 59248254 ATTCTAC---ATATTATCTAATCAAAAACTACATTATAACTGTCTAGTCAATACTGGACACTTATTACAGATTTCAAGATTAGAAGCGAGGAGTTCAGTCTTAAAA-A-TTTTA---AATTTACAT--------------------------------------------------------GACTGGTCGAGTAATTCGATATCAGAAAATTTCACCTTCCATTTCAAAAT----TTGAATGAAGAATGGTAGTCTAAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4476424 193 - 13342542 ATTCTAC---ATATTATCTAGTCAAAAACTACATTATAACTGTCTAGTCAATACTGGACACTTATTACAGATTTCAAGATTAGAAGCGAGGAGTTCAGTCTTAAAA-A-TTTAA---AATTTACAT--------------------------------------------------------GACTGGTCGAGTAATTCGATATCAGAAAATTTCACCTTCCATTTCAAAAT----TTGAATGAAGAATGGTAGTCTAAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5406925 194 + 7714307 ATTCTAC---ATATTATCTAATCAAAAACTACATTATAACTGTCTAGTCAATACTGGACACTTATTACAGATTTCAAGATTAGAAGCGAGGAGTTCAGTCTTAAAACA-TTTAA---AATTTACAT--------------------------------------------------------GACTGGTCGAGTAATTCGATATCAGAAAATTTCACCTTCCATTTCAAAAT----TTGAATGAAGAATGGTAGTCTAAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29214730 249 + 50890351 ATTCTAC---ATATTATCTAATCAAAAACTACATTATAACTGTCTAGTCAATACTGGACACTTACTACAGATTTCAAGATTAGAAGCGAGGAGTTCAGTCTTAAAA-T-TTTAA---AATTTACATGTAAATTTTACATCCCACGACAGCGGCGTGGGATCTGCCTCTCTTCGAGCAGCCGGGAGCGGTTGAGTAATTCGGTATCAGAAAATTTCACCTTCCATTTCAAAAT----TTGAATGAAGAATGGTAGTCTAAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 828301 194 - 2385121 ATTCTAC---ATATTATCTAATCAAAAACTACATTATAACTGTCTAGTCAATACTGGACACTTATTACAGATTTCAAGATTAGAAGCGAGGAGTTCAGTCTTAAAA-CATTTAA---AATTTACAT--------------------------------------------------------GACTGGTCGAGTAATTCGATATCAGAAAATTTCACCTTCCATTTCAAAAT----TTGAATGAAGAATGGTAGTCTAAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2273763 193 + 4274983 ATTCTAC---ATATTATCTAATCGAAAGCTACATTATAACTGTCTAGTCAATACTGGACACTTATTACAGATTTCAAGATTAGAATCGAGGAGTTCAGTCTTAAAA-T-TTTAA---AATTTACAT--------------------------------------------------------GACTGGTTGAGTAATTCGATATCAGAAAATTTCACCTTCCATTTCAAAAT----TTGAATGAAGAATGGTAGTCTAAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28505567 196 + 49145316 ATTTTACATGATACTATCTAATCCAAAACTACATTATAGCTGTCTAGTCAATACTGGACTCTAATTTCAGATTTCAAGATTAGAAGTAAGGAATTCAATCTTAAAA-T-TGTAG---AATGTACAT--------------------------------------------------------GACTTGTTGAGTAATTTGATGACAGAAAATTTCACATTCCATTTCAAAAT----TGGGATGAATAATGGTAGTCCAACA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5347577 196 + 8899380 ATTTTACATGATACTATCTAATCCAAAACTACATTATAACTGTCTAGTCAATACTGGACTCTAATTTCAGATTTCAAGATTAGAAGTTAGGAATTCAATCTTAAAA-T-TGTAA---AATTTACAT--------------------------------------------------------GACTTGTTGAGAAATTTGATAACAGAAAATTTCACATTCCATTTCAAAAT----TGGGATGAATAATGGTAGTCCAGCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1560357 196 - 2680843 ATTTTACATTATACTATCTAATCCAAACCTACATTATAACTATCTAGGCAATACTGGACTCTaatttcagatttcaagattagaagtaaggaattcaatcttaaaa-t-tgtaa---aatttaCGT--------------------------------------------------------GACTTGTTGAGTAATTTGGTAACAGAAAATTTCACATTCCATTTCAAAAT----TGGGACGAATAATGGTAGTCCAACA i cebCap1.NW_016107633v1 C 0 C 0 s canFam3.chr1 4564097 185 - 122678785 ACTCTAC---TTAGCATCTGATCTAAAACTTCTGTATGGCTATCTAGTCAACACTGGAC----ATTTCAAATTTCAGAGTTAGAAGTGGGGTGTTTGGTTTTCAAA-T-TTTAA---AATTTACAT--------------------------------------------------------GACTTGTGAAGTAATTTGATATCTG-ATATTTCACGTT---TTTCAAAAT----TTGGTTGAAGAATGGCAGTCTAACA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 271058 191 + 643850 ATTCTACATAGTATT-TTTAATCTAAAAGAACTTAATAACTATCGAGGGCATTT----CACTTATCTTAAATTTCAAAATTAGCAATGAGTGCTTGGCTTTT-----C-TTTCATGTCATTTTTAT--------------------------------------------------------GACTTCTTGGGTAATTTGATACTTGAAAATTTCACCTT---TTTCAAAATCTGGTTGAAAAAAGAGAGGCAGTCTAAGA i dasNov3.JH563638 C 0 I 2 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920732 368 - 30143674 I e otoGar3.GL873654 5422500 6496 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I e aotNan1.NW_018505377v1 309474 3 - 4471408 I a score=31094.000000 s hg38.chr19_GL383574v1_alt 23559 5 + 155864 GATTA s panTro5.chr19 36082373 5 + 61309027 GATTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39834361 5 + 64411610 GATTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6252150 5 - 8369475 GATTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63847125 5 - 106955855 GATTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30155361 5 + 53671032 TAGTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34608226 5 + 59248254 TAGTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4476617 5 - 13342542 TAGTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5407119 5 + 7714307 TAGTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29214979 5 + 50890351 GAGTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 828495 5 - 2385121 TAGTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2273956 5 + 4274983 GAGTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28505763 5 + 49145316 GATTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5347773 5 + 8899380 GATTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1560553 5 - 2680843 GATTA i cebCap1.NW_016107633v1 C 0 C 0 s canFam3.chr1 4564282 5 - 122678785 GATTA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920732 368 - 30143674 I e dasNov3.JH563638 271249 2 + 643850 I e otoGar3.GL873654 5422500 6496 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I e aotNan1.NW_018505377v1 309474 3 - 4471408 I a score=639833.000000 s hg38.chr19_GL383574v1_alt 23564 101 + 155864 AAGCCAAAAGTGtttg------ttttgttttgttttcgtttttt-tt--tgttgtt------------------------gtt-------ttgagacagagtctt-gctc--ttgcccaggctggagtgcagtggtgcgatctt s panTro5.chr19 36082378 103 + 61309027 AAGCCAAAAGTGTTTG------TTTTGTTTTGTTTGCGtttttt-ttgttgttgtt------------------------gtt-------ttgagacagagtctt-gctc--ttgcccaggctggagtgcagtggtgcgatctt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39834366 103 + 64411610 AAGCCAAAAGTGTTTG------TTTTGTTTTGTTTGCGtttttt-ttgttgttgtt------------------------gtt-------ttgagacagagtctt-gctc--ttgcccaggctggagtgcagtggtgggatctt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6252155 99 - 8369475 AAGCCAAAAGTGTTTG------Ttttgttttgtttgcgtttttt-----tgttgtt------------------------gtt-------ttgagacagagtctt-gctc--ttgcccaggctggagtgcagtggtgcgatctt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63847130 99 - 106955855 AAGCCAAAAGTGTTTTC-----CTTTGttttgtttgtgtttttg-----tg-tgtg------------------------tgt-------ttgagacagagtctt-gctc--ttgcccaggctggagtgcagtggtgcgatctc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30155366 122 + 53671032 AAGCCAAAGGTGTTTTCATttgttttgttttgtttgtgttttttgttgttgttgttgtt------------gtcgttgtCGtt-------ttgaggcagagtctt-gctc--ttgcccaggctggaatgcagtggcacgatctc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34608231 125 + 59248254 AAGCCAAAGGTGTTTTCATttgttttgttttgtttgtgttttttgttgttgttgttgttgtt---------gtcgttgtCGtt-------ttgaggcagagtctt-gctc--ttgcccaggctggaatgcagtggcacgatctc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4476622 134 - 13342542 AAGCCAAAGGTGTTTTCATttgttttgttttgtttgtgttttttgttgttgttgttgttgttgttgtCGTCGTCGTCGTCGtt-------ttgaggcagagtctt-gctc--ttgcccaggctggaatgcagtggcacgatctc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5407124 116 + 7714307 AAGCCAAAAGTGTTTTCAtttgttttgttttgtttgtgttttttgttgttgtt------------------gtcgttGTCGtt-------ttgaggcagagtctt-gctc--ttgcccaggctggaatgcagtggcacgatctc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29214984 113 + 50890351 AAGCCAAAAGtgttttca-----tttgttttgtttgtg-tttttgttgttgttgtt---------------ATCATTGTCGtt-------ttgaggaagagtctt-gctc--ttgcccaggctggagtgcagtggcgcgatctc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 828500 119 - 2385121 AAGCCAAAAGTGTTTTCATttgttttgttttgtttgtgttttttgttgttgttgtt---------------gtcgttgtCGtt-------ttgaggcagagtctt-gctc--ttgcccaggctggaatgcagtggcacgatctc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2273961 111 + 4274983 AAGCCAAAAGTGTTTTCATTTGTTTTGTTTTGTTTGTGtttgttgttgttgttgtt------------------------gtt-------ttgaggcagagtcttggctc--ttgcccaggctggagtgcagtggcgcgatctc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28505768 104 + 49145316 AAGCCAAAA--CTTTTCATTT-GTTTGTTTTGttt-tgtgttttattgttgttgtt------------------------gtt-------ttg----agagtctc-cctctgttgcccaggctggagtacagtggcacaatctt i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5347778 111 + 8899380 AAGCCAAAA--CTTTTCATTT-GTTTGTTTTGTTT-TGTGTTttgttgttgttgtt------------------------gttattgttgttT----Tgagtctc-cctctgttgcctaggcttcagtacagtggcacaatctc i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107633v1 1560558 104 - 2680843 AAGCCAAAA--CTTTTCGTTT-GTTTGTTTTGttt-tgtgttttattgttgttgtt------------------------gtt-------tta----aaagtctc-cctctattgcccagggtggagtacagtggcacaatctc i cebCap1.NW_016107633v1 C 0 I 1 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920732 368 - 30143674 I e dasNov3.JH563638 271249 2 + 643850 I e otoGar3.GL873654 5422500 6496 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4564287 0 - 122678785 C e aotNan1.NW_018505377v1 309474 3 - 4471408 I a score=1999778.000000 s hg38.chr19_GL383574v1_alt 23665 224 + 155864 ggctcgctgcagcctccacctcccgggttcaagcagtt---ctgccacagccttccgagtagctgggactacaggcgc---ccaacacagctggctaatttttgtattttgagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcagatgatccacccaccttggcctcccaaag-tgctgggattacaggtgtgaggcactgcacccggc s panTro5.chr19 36082481 224 + 61309027 ggctcgctgcagcctccacctcccgggttcaagcagtt---ctgccacagccttccgagtagctgggactacaggcgc---ccaccacagctggctaatttttgtattttgagtagagatggggtttcaccgtgttggccaggctggtctcaaactcctgacctcagatgatccacccaccttggcctcccaaag-tgctgggattacaggtgtgaggcactgcacccggc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39834469 224 + 64411610 ggctcgctgcagcctccacctcccgggttcaagcagtt---ctgccacagccttccgagtagctgggactacaggcgc---ccaccacagctggctaatttttgtattttgagtagagatggggtttcaccgtgttggccaggctggtctcaaactcctgacctcagatgatccacccaccttggcctcccaaag-tgctgggattacaggtgtgaggcactgcacccggc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6252254 206 - 8369475 ggctcgctgcagcctccacctcccgggttcaagcagtt---ctgccacagccttcccagtagctgggactacaggcgc---ccaccacagctggctaatttttgtattttgagtagagatggggtttcaccatgttggccaggctggtctcaaactcctgacctcagatgatccacccaccttggcc-------------------acaggtgtgaggcactgcacccggc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63847229 224 - 106955855 ggcttgctgcagcctccacctcccgggttcaagcagtt---ctgccacagcctcccgagtagctgggactacaggcgc---ccaccacagctggctaatttttgtattttgagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgacctcaaatgatccacccaccttggcctcccaaag-tgctgggattacaggtgtgaggcactgcacccggc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30155488 226 + 53671032 agttcactgcagcctccacctccagggttcaagcaattctcctgccacagcctcccaagtagctgggactataggcgc---ccaccacagctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactgctgacttgaaatgatccacccaccttgg-ctcccaaag-tgttgggattacagccgtgaggcactgcacccagc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34608356 226 + 59248254 ggttcactgcagcctccacctccagggttcaagcaattctcctgccacagcctcccaagtagctgggactataggcgc---ccaccacagctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactgctgacttgaaatgatccacccaccttgg-ctcccaaag-tgttgggattacagccgtgaggcactgcacccagc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4476756 226 - 13342542 ggttcactgcagcctccacctccagggttcaagaaattctcctgccacagcctcccaagtagctgggactataggcgc---ccaccacagctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactgctgacctgaaatgatccacccaccttgg-ctcccaaag-tgttgggattacagccgtgaggcactgcacccagc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5407240 226 + 7714307 ggttcactgcaacctccacctccagggttcaagcagttctcctgccacagcctcccaagtagctgggactataggcgc---ccaccacagctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactgctgacctgaaatgatccacccaccttgg-ctcccaaag-tgttgggattacagccgtgaggcactgcacccagc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29215097 226 + 50890351 ggttcactgcagcctccacctccagggttcaagcaattctcctaccacagcctcccaagtagctgggactataggcgc---ccaccacagctggctaatttttgtgtttttggtagagacggggtttcaccatgttggtcaggctggtctcaaactgctgacctgaaatgatccacccaccttgg-ctcccaaag-tgttgggattacagccgtgaggcactgcacccagc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 828619 226 - 2385121 ggttcactgcaacctccacctccagggttcaagcaattctcctgccacagcctcccaagtagctgggactataggcgc---ccaccacagctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactgctgacctgaaatgatccacccaccttgg-ctcccaaag-tgttgggattacagccgtgaggcactgcacccagc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2274072 225 + 4274983 ggttcactgcagcctccacctccagggttcaagcaattctcctgccacagcctcccaagtagctgggactacaggtgc---ccaccacagctagctaatttttgtatcgttagtagagacggggtttcaccatgttggccaggctggtctcaaactcttgaccccaaatgatccacccaccttggcctcccaaag-tgttgggattacagccgtgaggcact--acccggc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28505873 216 + 49145316 agctcaccgcaggctccacctcccaggtgcaagtgattctcctgcctcagcctcccaagtagctgggactacaggcacccaccaccacacctggctaatttttgtatttttagtagaggtggggtttcaccattttggccaggctggtctcaaactcttgacctcaaatgatccacccacctcagcttcccaaag-ttctaggattataggtgt--------------agc i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5347890 217 + 8899380 gcctcactgccggctccacctcccaggttcaagtgattctcctgcctcagcctcccaagtagctgggactacaggcaccaaccaccacaccttgctaatttttgtatttttagtagaggtgggttttcaccattttggccaggctggtctcaaactcttgacttcaaatgatccacccacctcagtctcccgaagtttctaggattataggtgt--------------TGC i saiBol1.JH378197 I 1 C 0 s cebCap1.NW_016107633v1 1560663 216 - 2680843 cgctcactgcaggctccacctcccaggttcaagtgattctcctgcctcagacttccaagtagctgggactacaggcgcccaccaccacacctggctaatttttgtatttttagtagaggtggggtttcaccattttggccaggctggtctcaaactcttgacctcaaatgatccacccacctcagcctcccagag-ttctaggattataggtgt--------------agc i cebCap1.NW_016107633v1 I 1 C 0 s aotNan1.NW_018505377v1 309477 216 - 4471408 ggctcactgcaggctccacctcccaggttgaagtgattctcctgcttcagcctcccaagtagctgggactacaggcgcccaccaccacacctggctaatttttgtatttttagtagaggtggggtttcaccattttggccaggctggtctcaaactcttgacctcaaatgatccacccacctcagcctcccaaag-ttctaggattatagttgt--------------agc i aotNan1.NW_018505377v1 I 3 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920732 368 - 30143674 I e dasNov3.JH563638 271249 2 + 643850 I e otoGar3.GL873654 5422500 6496 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4564287 0 - 122678785 C a score=30110.000000 s hg38.chr19_GL383574v1_alt 23889 3 + 155864 cTG s panTro5.chr19 36082705 3 + 61309027 cTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39834693 3 + 64411610 cTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6252460 3 - 8369475 cTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63847453 3 - 106955855 cTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30155714 3 + 53671032 cTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34608582 3 + 59248254 cTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4476982 3 - 13342542 cTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5407466 3 + 7714307 cTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29215323 3 + 50890351 cTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 828845 3 - 2385121 cTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2274297 3 + 4274983 cTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28506089 3 + 49145316 cTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5348107 3 + 8899380 CTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1560879 3 - 2680843 cTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 309693 3 - 4471408 cCA i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 271251 3 + 643850 CTA i dasNov3.JH563638 I 2 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920732 368 - 30143674 I e otoGar3.GL873654 5422500 6496 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I e canFam3.chr1 4564287 0 - 122678785 C a score=591208.000000 s hg38.chr19_GL383574v1_alt 23892 60 + 155864 AAGCCAAAAGTTTATTCATGGAATTTATAATACAGTGTGTATTTGGATGTAGAGATCCCT s panTro5.chr19 36082708 60 + 61309027 AAGCCAAAAGTTTATTCATGGAATTTATAATACAGTGTGTATTTGGATGTAGAGATCCCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39834696 60 + 64411610 AAGCCAAAAGTTTATTCATGGAATTTATAATACAGTGTGTATTTGGATGTAGAGATCCCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6252463 60 - 8369475 AAGCCAAAAGTTTATTCATGGAATTTATAATACAGTGTGTATTTGGATGTAGAGATCCCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63847456 60 - 106955855 AAGCCAAAAGTTTATTCATGGAATTTATAATATAGTGTGTATTTGGATGTAGAGATCCCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30155717 60 + 53671032 AAGCCAAAAGTTTATTCGTATAATTTATAATACAGCATGTATTTGGATGTAGAGATCCCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34608585 60 + 59248254 AAGCCAAAAGTTTATTCGTATAATTTATAATACAGCGTGTATTTGGATGTAGAGATCCCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4476985 60 - 13342542 AAGCCAAAAGTTTATTCGTATAATTTATAATACAGCGTGTATTTGGATGTAGAGATCCCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5407469 60 + 7714307 AAGCCAAAAGTTTATTCGTGGAATTTATAATACAGCGTGTATTTGGATGTAGAGATCCCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29215326 60 + 50890351 AAGCCAAAAGTTTGTTCGTGGAATTTATAATACAGCGTGTATTTGGATGTAGAGATCCCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 828848 60 - 2385121 AAGCCAAAAGTTTATTCGTGGAATTTATAATACAGCGTGTATTTGGATGTAGAGATCCCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2274300 60 + 4274983 AAGCCAAAAGTTTATTCATGGAATTTATAATACAGCGTGTATTTGGATGTAGAGATCCCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28506092 49 + 49145316 AAGCCAAAAGTTTATTCATGAATCTC-----------TGCATTTGGATGTAGAGATCCCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5348110 49 + 8899380 AAGCCAAAAGTTTATTCATGGATCTC-----------TGTATTTGGTTGTAGAGATCCCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1560882 49 - 2680843 AAGCCAAAAGTTTATTCATGGATCTC-----------TGCATTTGGATGTAGAGATCCCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 309696 49 - 4471408 AAGCCAAAAGTTTATTCATGGATCTC-----------TGCATTTGGATGTAGAGATCCCT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4564287 60 - 122678785 AAGCCAAAAGTTTGTTTATGAAGTTTAGAATACCATATGTATATGCATTTAGAGATCTCT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 271254 46 + 643850 AGAACTAAAACTTATTCACTGAGTTTTGAATACAGTATGTATTTGG-------------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3920732 368 - 30143674 I e otoGar3.GL873654 5422500 6496 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I a score=313674.000000 s hg38.chr19_GL383574v1_alt 23952 28 + 155864 GTTACTG-TTTTTAAACTATGGATTAAGA s panTro5.chr19 36082768 28 + 61309027 GTTACTG-TTTTTAAACTATGGATTAAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39834756 28 + 64411610 GTTACTG-TTTTTAAACTATGGATTAAGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6252523 28 - 8369475 GTTACTG-TTTTTAAACTATGGATTAAGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63847516 29 - 106955855 GTTACTGTTTTTTAAACTATGGATTAAGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30155777 28 + 53671032 GTTCCTC-TTTTTAAACTATGGATTAAGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34608645 28 + 59248254 GTTCCTC-TTTTTAAACTATGGATTAAGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4477045 28 - 13342542 GTTCCTC-TTTTTAAACTATGGATTAAGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5407529 28 + 7714307 GTTCCTC-TTTTTAAACTATGGATTAAGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29215386 28 + 50890351 GTTCCTC-TTTTTAAACTATGGATTAAGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 828908 28 - 2385121 GTTCCTC-TTTTTAAACTATGGATTAAGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2274360 28 + 4274983 GTTCCTC-TTTTTAAACTATGGATTAAGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28506141 22 + 49145316 G-------TTTTTAAGCTATGGATTAAGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5348159 28 + 8899380 GTTACTC-TTTTTAAGCTATGGATTAAGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1560931 28 - 2680843 ATTACTC-TTTTTAAGCTACGGATTAAGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 309745 28 - 4471408 GTTACTC-TTTTTAAGCTATGGATTAAGA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3921100 28 - 30143674 GTTACTC-TTTTTAAATTGCGGATTAAGA i micMur3.chr22 I 368 I 134 s canFam3.chr1 4564347 25 - 122678785 GTTA-TC-TTTGTAAACTATCAATTGA-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 271300 27 + 643850 -TTACTT-TATTTGTACTCTTGATTAGGA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e otoGar3.GL873654 5422500 6496 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I a score=532535.000000 s hg38.chr19_GL383574v1_alt 23980 41 + 155864 GTTAATCTCTTTGAGTAACAGTCTTAGCATTCTCTTTTGAA- s panTro5.chr19 36082796 41 + 61309027 GTTAATCTCTTTGAGTAACAGTCTTAGCATTCTCTTTTGAA- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39834784 41 + 64411610 GTTAATCTCTTTGAGTAACAGTCTTAGCATTCTCTTTTGAA- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6252551 41 - 8369475 GTTAATCTCTTTGAGTAACAGTCTTAGCATTCTCTTTTGAA- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63847545 41 - 106955855 GTTAATCTCTTTGAGTAACAGTCTTAGAATTCTCTTTTGAA- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30155805 41 + 53671032 GTTAATCTCTTTGAGTAACATTCTTAGAATTCTTTTTTGAA- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34608673 41 + 59248254 GTTAATCTCTTTGAGTAACATTCTTAGAATTCTTTTTTGAA- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4477073 41 - 13342542 GTTAATCTCTTTGAGTAACATTCTTAGAATTCTTTTTTGAA- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5407557 41 + 7714307 GTTAATCTCTTTGAGTAACATTCTTAGAATTCTTTTTTGAA- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29215414 41 + 50890351 GTTAATCTCTTTGAGTAACATTCTTAGAATTCTTTTTTGAA- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 828936 41 - 2385121 GTTAATCTCTTTGAGTAACATTCTTAGAATTCTTTTTTGAA- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2274388 41 + 4274983 GTTAATCTCTTTGAGTAACATTCTTAGAATTCTTTTTTGAA- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28506163 41 + 49145316 GTTAATCTCTTTGAGTAACATTCTTAGAATTCTTTTTTGAA- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5348187 41 + 8899380 ATTAATCTCTTTGAGTAGCATTTTTAGAATTGTCTTTTGAA- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1560959 41 - 2680843 GTTAATCTCTTTGAGTAACATTCTTAGAATTCTCTTTTGAA- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 309773 41 - 4471408 GTTAATCTCTTTGAGTAACATTCTTAGAATTCTCTTCTGAA- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3921262 41 - 30143674 GTTAATCTCTTTGAGTAACATTCTTAGAATTTTCTTTAGAA- i micMur3.chr22 I 134 I 40 s canFam3.chr1 4564372 38 - 122678785 GTTAATCTC---AAGTGACATTCTTAGAATTCTCTTCTGGA- i canFam3.chr1 C 0 I 27 s dasNov3.JH563638 271327 40 + 643850 GTTAATCGCTCCAAGTAACATTTT--GAATTTCTCTTCAAAG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e otoGar3.GL873654 5422500 6496 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I a score=11099.000000 s hg38.chr19_GL383574v1_alt 24021 1 + 155864 C s panTro5.chr19 36082837 1 + 61309027 C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39834825 1 + 64411610 C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6252592 1 - 8369475 C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63847586 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30155846 1 + 53671032 C i rheMac8.chr19 C 0 I 4 s macFas5.chr19 34608714 1 + 59248254 C i macFas5.chr19 C 0 I 4 s macNem1.NW_012011689v1 4477114 1 - 13342542 C i macNem1.NW_012011689v1 C 0 I 3 s cerAty1.NW_012005268v1 5407598 1 + 7714307 C i cerAty1.NW_012005268v1 C 0 I 3 s chlSab2.chr6 29215455 1 + 50890351 C i chlSab2.chr6 C 0 I 3 s manLeu1.NW_012102454v1 828977 1 - 2385121 C i manLeu1.NW_012102454v1 C 0 I 2 s colAng1.NW_012111697v1 2274429 1 + 4274983 C i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28506204 1 + 49145316 C i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5348228 1 + 8899380 C i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1561000 1 - 2680843 C i cebCap1.NW_016107633v1 C 0 I 1908 s aotNan1.NW_018505377v1 309814 1 - 4471408 C i aotNan1.NW_018505377v1 C 0 I 2250 s canFam3.chr1 4564437 1 - 122678785 T i canFam3.chr1 I 27 C 0 s dasNov3.JH563638 271367 1 + 643850 T i dasNov3.JH563638 C 0 I 1 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3921303 40 - 30143674 I e otoGar3.GL873654 5422500 6496 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I a score=222819.000000 s hg38.chr19_GL383574v1_alt 24022 43 + 155864 TTTTTTTTTTTTAATTTCTCAGGGAGAGTGTTattgggaaacc s panTro5.chr19 36082838 43 + 61309027 TTTTTTTTTTTTAATTTCTCAGGGAGAGTGTTattgggaaacc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39834826 42 + 64411610 -TTTTTTTTTTTAATTTCTCAGGGAGAGTGTTattgggaaacc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6252593 42 - 8369475 -TTTTTTTTTTTAATTTCTCAGGGAGAGTGTTattgggaaacc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63847587 42 - 106955855 -TTTTTTTTTTTAATTTCTCGGGGAGAGTGTTattgggaaacc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30155851 43 + 53671032 TTTTTTTTTTTAAATTTATCGGGGAGAGTGTTattgtgaaacc i rheMac8.chr19 I 4 C 0 s macFas5.chr19 34608719 43 + 59248254 TTTTTTTTTTTAAATTTATCGGGGAGAGTGTTattgtgaaacc i macFas5.chr19 I 4 C 0 s macNem1.NW_012011689v1 4477118 43 - 13342542 TTTttttttttaaatttatcacggagagtgttattgtgaaacc i macNem1.NW_012011689v1 I 3 C 0 s cerAty1.NW_012005268v1 5407602 43 + 7714307 TTTTTTTTTTTTAATTTATCGGGGAGAGTGTTattgtgaaacc i cerAty1.NW_012005268v1 I 3 C 0 s chlSab2.chr6 29215459 41 + 50890351 TTTTTTTTTTTTAATTTATTGGG--GAGTGTTattgtgaaacc i chlSab2.chr6 I 3 C 0 s manLeu1.NW_012102454v1 828980 43 - 2385121 TTTTTTTTTTTTAATTTATCGGGGAGAGTGTTattgtgaaacc i manLeu1.NW_012102454v1 I 2 C 0 s colAng1.NW_012111697v1 2274430 43 + 4274983 TTTTTTTTTTTTAATTTATCGGGGAGAGTGTTattgtgaaacg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28506205 29 + 49145316 --------------CCCCGCCCCCAGAGTGTTATTGGGAAGTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5348229 29 + 8899380 --------------CCCCACCCCCAGAGTGTCATTGGGAAGTC i saiBol1.JH378197 C 0 C 0 s canFam3.chr1 4564438 21 - 122678785 -TCTTTCCctt-------------------ttattgtgaag-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 271369 37 + 643850 CTTTTTTTCCCCCACTTCTCTGAAAAGATATTTTTTC------ i dasNov3.JH563638 I 1 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3921303 40 - 30143674 I e otoGar3.GL873654 5422500 6496 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I e aotNan1.NW_018505377v1 309815 2250 - 4471408 I e cebCap1.NW_016107633v1 1561001 1908 - 2680843 I a score=284546.000000 s hg38.chr19_GL383574v1_alt 24065 31 + 155864 taactacacaggctg-aaaagatacataagat s panTro5.chr19 36082881 31 + 61309027 taactacacaggctg-aaaagatacataagat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39834868 31 + 64411610 taactacacaggctg-aaaagatacataagat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6252635 31 - 8369475 taactacacaggctg-aaaagatacataagat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63847629 31 - 106955855 taactacacaggctg-aaaagatacataaaat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30155894 31 + 53671032 taactgcacaggctg-aaaagatacataaaat i rheMac8.chr19 C 0 I 300 s macFas5.chr19 34608762 31 + 59248254 taactgcacaggctg-aaaagatacataaaat i macFas5.chr19 C 0 I 304 s macNem1.NW_012011689v1 4477161 31 - 13342542 taactacacaggctg-aaaagatacataaaat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5407645 31 + 7714307 taactacacaggctg-aaaagatacataagat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29215500 31 + 50890351 taactacacaggctg-aaaagatacataagat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 829023 31 - 2385121 taactacacaggctg-aaaagatacataagat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2274473 31 + 4274983 taactacccaggctg-aaaagatacataaggt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28506234 31 + 49145316 TAACTACACAGACTG-AAAAGATATAGAAGAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5348258 31 + 8899380 TAACTACACAGACTG-AAAAGATATGTAAGGT i saiBol1.JH378197 C 0 C 0 s micMur3.chr22 3921343 31 - 30143674 TAACTTCAAATGTTG-AAAAGATACAGAAGAT i micMur3.chr22 I 40 C 0 s canFam3.chr1 4564459 30 - 122678785 taaccacacatgttg-aaaagatacatagat- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 271406 32 + 643850 CCACTTTTTAAATTGTGAAATATACCACAGCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e otoGar3.GL873654 5422500 6496 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I e aotNan1.NW_018505377v1 309815 2250 - 4471408 I e cebCap1.NW_016107633v1 1561001 1908 - 2680843 I a score=181141.000000 s hg38.chr19_GL383574v1_alt 24096 17 + 155864 --aaaaatgaaatattttt s panTro5.chr19 36082912 17 + 61309027 --aaaaatgaaatattttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39834899 17 + 64411610 --aaaaatgaaatattttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6252666 17 - 8369475 --aaaaatgaaatattttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63847660 17 - 106955855 --aaaaatgaaatattttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30156225 17 + 53671032 --aaaaatgaaatattttt i rheMac8.chr19 I 300 C 0 s macFas5.chr19 34609097 17 + 59248254 --aaaaatgaaatattttt i macFas5.chr19 I 304 C 0 s macNem1.NW_012011689v1 4477192 17 - 13342542 --aaaaatgaaatattttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5407676 17 + 7714307 --aaaaatgaaatattttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29215531 17 + 50890351 --aaaaatgaaatattttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 829054 17 - 2385121 --aaaaatgaaatattttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2274504 17 + 4274983 --aaaaatgaaatattttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28506265 17 + 49145316 --AAAAATGAAAtttgttt i calJac3.chr22 C 0 I 1456 s saiBol1.JH378197 5348289 16 + 8899380 ---AAAATGAAAtttgttt i saiBol1.JH378197 C 0 I 1756 s micMur3.chr22 3921374 17 - 30143674 --AAAAATGAaatattttt i micMur3.chr22 C 0 C 0 s canFam3.chr1 4564489 17 - 122678785 --aaaaatgaaatgttttt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 271438 19 + 643850 TAATGAATGAGATATTTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e otoGar3.GL873654 5422500 6496 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I e aotNan1.NW_018505377v1 309815 2250 - 4471408 I e cebCap1.NW_016107633v1 1561001 1908 - 2680843 I a score=2097567.000000 s hg38.chr19_GL383574v1_alt 24113 286 + 155864 aaacaaaca----------tctttgtaaccaccacccagggcaagacagacattgccagcatcccagaagcctcccaccacctatattttcccatcacaacta-tcaccatcttaatttaagctagatataaatgttcttctgacatttatagttttacca--tataagtttacatctctaaataatagagtttaattttgccca-ttttt---aactttatgtaaataggattgtgttgtatatattttatttttagcttttattgtttcataatattcca------------------tc--atgaatataacacaagttt s panTro5.chr19 36082929 286 + 61309027 aaacaaaca----------tctttgtaaccaccacccagggcaagacagacattgccagcatcccagaagcctcgcaccacctatattttcccatcacaacta-tcaccatcttaatttaagctagatataaatgttcttctgacatttatagttttacca--tgtaagtttacatctctaaataatagagtttaattttgccca-ttttt---aactttatgtaaataggattgtgttgtatatattttatttttagcttttattgtttcataatattcca------------------tc--atgaatataacacaagttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39834916 286 + 64411610 aaacaaaca----------tctttgtaaccaccacccagggcaagacagacattgccagcatcccagaagcctcgcaccacctatattttcccatcacaacta-tcaccatcttaatttaagctagatataaatgttcttctgacatttatagttttacca--tgtaagtttacatctctaaataatagcgtttaattttgccca-ttttt---aactttatgtaaataggattgtgttgtatatattttatttttagcttttattgtttcataatattcca------------------tc--atgaatataacacaagttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6252683 286 - 8369475 aaacaaaca----------tctttgtaaccaccacccagggcaagacagacattgccagcatcccagaagcctcgcaccacctatattttcccatcacaacta-tcaccatcttaatttaagctagatataaatgttcttctgacatttatagttttacca--tgtaagtttacatctctaaataatagagtttaattttgccca-ttttt---aactttatgtaaataggattgtattgtatatattttatttttagcttttattgtttcataatattcca------------------tc--atgaatataacacaagttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63847677 285 - 106955855 aaacaaaca----------tctttgtaaccaccacccagggcaagacagacattgccagcatccca-aagcctcacaccacctatattttcccattacaacta-tcaccatcttaatttaagctagatataaatgttcttctgacatttatagttttaccg--tgtaagtttacatctctatataatagagtttaattttgccca-ttttt---aactttatgtaaataggattatgttgtatatattttatttttagcttttattgtttcataatattcca------------------tc--atgaatataacacaagttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30156242 284 + 53671032 aagcaaaca----------tctttgtaactatcacccagggcaagacagacattgccagcatcccagaagcctcgcaccacctatatttttccatcgcaacta-tcaccatcttaatttaagctagatataaatgtttttctgacatttatagttttacca--tgtaagtttacatctcta---aatatagtttaattttgcccatttttt---aactttatgtaaataagattatcttgtatatattttatttttagcttttattgtttcatagtattcca------------------tc--atgactataacacaagttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34609114 284 + 59248254 aagcaaaca----------tctttgtaactatcacccagggcaagacagacattgccagcatcccagaagcctcgcaccacctatatttttccatcacaacta-tcaccatcttaatttaagctagatataaatgtttttctgacatttatagttttacca--tgtaagtttacatctcta---aatagagtttaattttgcccatttttt---aactttatgtaaataagattatcttgtatatattttatttttagcttttattgtttcatagtattcca------------------tc--atgactataacacaagttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4477209 284 - 13342542 aaacaaaca----------tctttgtaactatcacccagggcaagacagacattgccagcatcccagaagcctcgcaccacctatatttttccatcacaacta-tcaccatcttaatttaagctagatataaatgtttttctgacatttatagttttacca--tgtaagtttacatctcta---aatagagtttaattttgcccatttttt---aactttatgtaaataagattatcttgtatatattttatttttagcttttattgtttcatagtattcca------------------tc--atgactataacacaagttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5407693 283 + 7714307 aaacaaaca----------tctttgtaactatcacccagggcaagacagacattgccagcatcccagaagccttgcaccacctata-ttttccatcacaacta-tcaccatcttaatttaagctagatatagatgtttttctgacatttatagttttacca--tgtaagtttacatctcta---aatagagtttaattttgcccatttttt---aactttatgtaaataagattatcttgtatgtattttatttttagcttttattgtttcatagtattcca------------------tc--atgactataacacaagttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29215548 294 + 50890351 aaacacacatctttgtaactctttgtaactatcacctagggcaaggcagacattgccaacatcccagaagcctcgcaccacctatatttttccatcacaacta-tcaccatcttaatttaagctagatataaatgtttttctgacatttatagttttacca--tgtaaggttacatctcta---aatagagtttaattttgcccatttttt---aactttatgtaaataagattatcttgtatatattttatttttagcttttattgtttcatagtattcca------------------tc--atgactataacacaagttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 829071 283 - 2385121 aaacaaaca----------tctttgtaactatcacccagggcaagacagacattgccagcatcccagaagcctcgcaccacctata-ttttccatcacaacta-tcaccatcttaatttaagctagatatagatgtttttctgacatttatagttttacca--tgtaagtttacatctcta---aatagagtttaattttgcccatttttt---aactttatgtaaataagattatcttgtatatattttatttttagcttttattgtttcatagtattcca------------------tc--atgactataacacaagttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2274521 284 + 4274983 aaacaaaca----------tctttgtaactatcacccagggcaagacagacattgccagcatcccagaagcctcgcatcacctgtatttttccgtcacaacta-tcaccatcttaatttaagctagatataaatgtttttctgacatttatagttttacca--tgtaagtttacatctcta---aatagagtttaattttgcccatttttt---aactttatgtgaataggattatcttgtatatattttatttttagcttttattgtttcatagtattcca------------------tc--atgactatagcacaagttt i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3921391 278 - 30143674 aaacaaaga----------tccttgtaactaccacccagggca----agacattgccagcatcccagaagcttcccaccgcctgtatcttcccatcacaactacttaccatc-----ttaaggtagttacctgtgttattctcacatttgtactttgacca--tgtaagtttatatcgctaaatattagaatttagtttta-ccatttttc---accagcatgtaaatggaattattttgcatgtattttatttttggcttttattgttgcatagtattcca------------------tc--atgaatataacataagttt i micMur3.chr22 C 0 I 1171 s canFam3.chr1 4564506 292 - 122678785 aaactaaga----------t-gctgtaactaccacccagggcaagacagacattgccagcatcccagaatcctcccacctcctgcatcttcccatcacctcta-ctactctc-----ttaagctaaatttaaacattattctaacattcatagttttatcacttttaagtttacatcccta---aa-ggagtttacctttgtccttttctg---aactttatataaatggaatcatcttgtatatatttgattttag---tttgttgtggcatagtatttcacctatgatgtgtattcattc--ttgaatataac--aagttt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 271457 265 + 643850 AAACAAAGA----------CCATTATATC---CATCTGGGGCAAGATAGCCTTCGCTAGAGTTCTAGAAGCCTC---CCACGTG-AGTCTTCAATCACTACTC-CCACTGTC-----TTAAGCTAGAGAGAAACTCTATTCTGTCGtttatagttttagca--gttaaatttacatcacta-------cagtttagttttgcccatttcttaaaaactttatgtaaat-ggat--tcctgtacttactttgtttt-ggcttttgtt----tatagtatttca------------------acatatgaatatagcacaagtgt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e otoGar3.GL873654 5422500 6496 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I e aotNan1.NW_018505377v1 309815 2250 - 4471408 I e cebCap1.NW_016107633v1 1561001 1908 - 2680843 I e saiBol1.JH378197 5348305 1756 + 8899380 I e calJac3.chr22 28506282 1456 + 49145316 I a score=177700.000000 s hg38.chr19_GL383574v1_alt 24399 26 + 155864 attccttctgccattgttttggatat s panTro5.chr19 36083215 26 + 61309027 attccttctgccattgttttggatat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39835202 26 + 64411610 attccttctgccattgttttggatat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6252969 26 - 8369475 attccttctgccattgttttggatat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63847962 26 - 106955855 attccttctgccattgttttggatat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30156526 26 + 53671032 attccttctgccattgttttgggtat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34609398 26 + 59248254 attccttctgccattgttttgggtat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4477493 26 - 13342542 attccttctgccattgttttgggtat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5407976 26 + 7714307 attccttctgccattgttttggatat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29215842 26 + 50890351 attccttctgccattgttttggatat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 829354 26 - 2385121 attccttctgccattgttttggatat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2274805 26 + 4274983 attccttctgccattgttttggatat i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4564798 22 - 122678785 ----attctgtattttttttatatac i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 271722 26 + 643850 atcaattctgtagttgttttagatag i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3921669 1171 - 30143674 I e otoGar3.GL873654 5422500 6496 + 5549422 I e mm10.chr7 111053095 2304 - 145441459 I e aotNan1.NW_018505377v1 309815 2250 - 4471408 I e cebCap1.NW_016107633v1 1561001 1908 - 2680843 I e saiBol1.JH378197 5348305 1756 + 8899380 I e calJac3.chr22 28506282 1456 + 49145316 I a score=2354721.000000 s hg38.chr19_GL383574v1_alt 24425 335 + 155864 ---------tgca-------tttagattgtttgcagtttggggctattataaacaatgcttttatgaacatttctgtttaag-tgcactggtgcatgtttatttcgttttcttgag-attatatacttagaatttgaattgcaagaacatggggaatgttggtctttatc------aggtaatgccaggtagtttttcaaagtagttgtttagtggtttttacttcatttattagtatgtaagagttc---ttgtttcatatcccttaccaacaaccgtacgtg---------gtatcatatatttcaattctagccaatcctggtgggtatgtagt----tgtatttagttttaatcattt-ccctcattactaa s panTro5.chr19 36083241 335 + 61309027 ---------tgca-------tttagattgtttgcagtttggggctattataaacaatgcttttatgaacatttctgtttaag-tgcactggtgcatgtttatgtagttttcttgag-attatatacttagaatttgaattgcaagaacatggggaatgttggtctttatc------aggtaatgccaggtagtttttcaaagtagttgtttagtggtttttacttcatttattagtatgtaagagttc---ttgtttcatatcccttaccaacaaccatacgtg---------gtatcatatatttcaattctagccaatcctggtgggtatgtagt----tgtatttagttttaatcattt-ccctcattactaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39835228 335 + 64411610 ---------tgca-------tttagattgtttgcagtttggggctattataaacaatgcttttatgaacatttctgtttaag-tgcactggtgcatgtttatgtagttttcttgag-attatatacttagaatttgaattgcaagaacatggggaatgttggtctttatc------aggtaatgccaggtagtttttcaaagtagttgtttagtggtttttacttcatttattagtatgtaagagttc---ttgtttcatatcccttaccaacaaccatacgtg---------gtatcatatatttcaattctagccaatcctggtgggtatgtagt----tgtatttagttttaatcattt-ccctcattactaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6252995 335 - 8369475 ---------tgca-------tttagattgtttgcagtttggggctattataaacaatgcttttatgaacatttctgttcaag-tgcactggtgcatgtttatgtagttttcttgag-attatatacttagaatttgaattgcaagaacatggggaatgttggtctttatc------aggtaatgccaggtagtttttcaaagtagttgtttagtggtttttacttcatttattagtatgtaagagttc---ttgtttcatatcccttaccaacaaccatacgtg---------gtatcatatatttcaattctagccaatcctggtgggtatgtagt----tgtatttagttttaatcattt-ccctcattactaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63847988 334 - 106955855 ---------tgca-------tttagattgtttgcagtttggggctattataaacaatgattttatgaacatttctgtttaag-tgcactgatgcgtgtttatgtagttttcttgag-attatatacttagaatttgaattgcaagaacatggggaatg-tggtctttatc------aggtaatgccaagtagttttccaaagtacttgtttagtggtttttacttcatttattagtatgtaagagttc---ttgtttcatatcccttaccaacaaccatacttg---------gtatcatatattttaattctagccaatcctggtgggtatgtagt----tgcatttagttttaatcattt-ccctcattactaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30156552 335 + 53671032 ---------tgca-------tttagattgtttgcagtttggggctattataaacagtgcttttatgaacatttctgtttaag-tgcactgatgcatgtttatgtagttttcttgag-gttatatacttagaacttgaattgcaagaacatggggaatgtttgtctttatc------aggtaatgccaagtagttttccaaagtagttgtttactggtttttagttcatttattagtatgtaagagttc---ttgtttcatatcccttaccaacaaccatactta---------gtatcatatatttcaattctagccaatcctggtgggtatatagt----tgtatttagttttaatcattt-ccctcatcactaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34609424 335 + 59248254 ---------tgca-------tttagattgtttgcagtttggggctattataaacagtgcttttatgaacatttctgtttaag-tgcactgatgcatgtttatgtagttttcttgag-gttatatacttagaacttgaattgcaagaacatggggaatgtttgtctttatc------aggtaatgccaagtagttttccaaagtagttgtttactggtttttagttcatttattagtatgtaagagttc---ttgtttcatatcccttaccaacaaccatactta---------gtatcatatatttcaattctagccaatcctggtgggtatatagt----tgtatttagttttaatcattt-ccctcatcactaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4477519 335 - 13342542 ---------tgca-------tttagattgtttgcagtttggggctattataaacagtgcttttatgaacatttctgtttaag-tgcactgatgcatgtttatgtagttttcttgag-gttatatacttagaacttgaattgcaagaacatggggaatgtttgtctttatc------aggtaatgccaagtagttttccaaagtagttgtttactggtttttagttcatttattagtatgtaagagttc---ttgtttcatatcccttaccaacaaccatactta---------gtatcatatatttcaattctagccaatcctggtgggtatatagt----tgtatttagttttaatcattt-ccctcatcactaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5408002 335 + 7714307 ---------tgca-------tttagattgtttgcagtttggggctattataaacagtgcttttatgaacatttctgtttaag-tgcactgatgcatgtttatgtagttttcttgag-gttatatacttagaatttgaattgcaagaacatggggaatgtttgtctttatc------aggtaatgccaagtagttttccaaagtagttgtttactggtttttacttcatttattagtatgtaagagttc---ttgtttcatatcccttaccaacaaccatactta---------gtatcatatgtttcaattctagccaatcctggtgggtatatagt----tgtatttagttttaatcattt-ccctcatcactaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29215868 335 + 50890351 ---------tgca-------tttagattgtttgcagtttggggctattataaacagtgcttttatgaacattcctgtttaag-tgcactgatgcatgtttatgtagttttcttgag-gttatatacttagaatttgaattgcaagaacatggggaatgtttgtctttatc------aggtaatgccaagtagttttccaaagtagttgtttactggtttttacttcatttattagtatgtaagagttc---ttgtttcatatcccttaccaacaaccatactta---------gtatcatatatttcaagtctatataatcctggtgggtatatagt----tgtatttagttttaatcattt-ccctcatcactaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 829380 335 - 2385121 ---------tgca-------tttagattgtttgcagtttggggctattataaacagtgcttttatgaacatttctgtttaag-tgcactgatgcatgtttatgtagttttcttgag-gttatatacttagaatttgaattgcaagaacatggggaatgtttgtctttatc------aggtaatgccaagtagttttccaaagtagttgtttactggtttttacttcatttattagtatgtaagagttc---ttgtttcatatcccttaccaacaaccatactta---------gtatcatatgtttcaattctagccaatcctggtgggtatatagt----tgtatttagttttaatcattt-ccctcatcactaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2274831 333 + 4274983 ---------tgca-------tttagattgtttgcagtttggagctattataaac--tgcttttatgaacatttctgtttaag-tgcactgatgcatgtttatgtagttttcttgag-gttatatacttagaatttgaattgcaagaacatggggaatgtttgtttttatc------aggtaatgccaagtagttttccaaagtagttgtttactggtttttacttcatttattagtatgtaagagttc---ttgtttcatatcccttaccagcaaccatactta---------gtatcatatgtttcaattctagccaatcctggtgggtatatagt----tgtatttagttttaatcattt-ccctcatcactaa i colAng1.NW_012111697v1 C 0 C 0 s mm10.chr7 111055399 339 - 145441459 ---------TGTT-------Cttagcttgtttacagtttggggctattgagaacaatgcttttaggaaaattaatgtttgaa-tgcactgatg--tgttgaaataattttctggggaagcacatacttagaatttgagttgtaggaatatagggaa-atatgtctttact------aagtaatgcaaagtaattttctctagtaggtgattatgcatgtgtattt------tcaaca-gcaagaattctagttgttccatatgtctcaccagtcatagtactaaatgccatatatgccatatattttaattctcaccagt-ttgatgggtaggcaattcagtgtatt---ttttatttgtttatttttgttactaa i mm10.chr7 I 2304 C 0 s canFam3.chr1 4564820 315 - 122678785 ---------tacagttaatttttaaattgttt--agtttt----------------tgctattatgaacaattgtgtttaag-tgcactgatgcccgtct--gtagttttcttgag-gatatatac-------ttgaattgcaggatcgtttggaatgtgtgtctttatctttattaggtaatgctaagcagttttccagagttgttgcttactagtttctatttcagtcattagtatatgagagttc---tagttccatatcctttaccggcaataatactga---------gtaccaggtattttaattct-gtcgggtctggtgggt--gtgat----tgtacttgactttaatc---t-tcctgattactaa i canFam3.chr1 C 0 I 113 s dasNov3.JH563638 271748 237 + 643850 tctacacttgaca-------tttagattgtttacattttttggccattaggaatggtgcctttatgaacatttttggttaagttgtactgatgcatgtttatgtagttttcttgag-catatatatttagaaattgaattgcaggctcatggggaa------tcttcatc---------------------------------------------------------------------------------tttCTACAT---CCTCACGAACAA---TACTTG---------GTATCAGATACTTTATTTCTAGCCAATCATG----------AGG----TGCCTTTGA----AATCCTTT-TCC---------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3921669 1171 - 30143674 I e otoGar3.GL873654 5422500 6496 + 5549422 I e aotNan1.NW_018505377v1 309815 2250 - 4471408 I e cebCap1.NW_016107633v1 1561001 1908 - 2680843 I e saiBol1.JH378197 5348305 1756 + 8899380 I e calJac3.chr22 28506282 1456 + 49145316 I a score=30303.000000 s hg38.chr19_GL383574v1_alt 24760 5 + 155864 atggg s panTro5.chr19 36083576 5 + 61309027 atggg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39835563 5 + 64411610 atggg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6253330 5 - 8369475 gtggg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63848322 5 - 106955855 atggg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30156887 5 + 53671032 atgag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34609759 5 + 59248254 atgag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4477854 5 - 13342542 atgag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5408337 5 + 7714307 atgag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29216203 5 + 50890351 atgat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 829715 5 - 2385121 atgag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2275164 5 + 4274983 atgag i colAng1.NW_012111697v1 C 0 C 0 s mm10.chr7 111055738 5 - 145441459 ttggg i mm10.chr7 C 0 I 110 s canFam3.chr1 4565248 5 - 122678785 atgag i canFam3.chr1 I 113 I 35 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3921669 1171 - 30143674 I e dasNov3.JH563638 271985 0 + 643850 C e otoGar3.GL873654 5422500 6496 + 5549422 I e aotNan1.NW_018505377v1 309815 2250 - 4471408 I e cebCap1.NW_016107633v1 1561001 1908 - 2680843 I e saiBol1.JH378197 5348305 1756 + 8899380 I e calJac3.chr22 28506282 1456 + 49145316 I a score=1232103.000000 s hg38.chr19_GL383574v1_alt 24765 226 + 155864 gctga--------------------------------------------------------------------ccagc------------------ttttcatatctgggtg-tttggat-ttcatttttcataaaatgcctttgaa---atctttt-cc-ttttttaa-atcgaaacac--gtctttttctagagtt-------ctgtattctgaatatatctc-------------cattgttggatgtatatattgcaaac-atttttt-ccatttagtagtttctttaaattaacagaagttcttcattttaatgtaaacatgttcatcagttt--tttatg s panTro5.chr19 36083581 224 + 61309027 gctga--------------------------------------------------------------------ccagt------------------ttttcatatctgggtg-tttggat-ttcatttttcataaaatgcctttgaa---atctttt-cc-ttttttaa-attgaaacgc--gtctttttctagagtt---------gtattctgaatatatctc-------------cattgttggatatatatattgcaaac-atttttt-ccatttagtagtttctttaaattaacagaagttcttcattttaatgtaaacatgttcatcagttt--tttatg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39835568 224 + 64411610 gctga--------------------------------------------------------------------ccagt------------------ttttcatatctgggtg-tttggat-ttcatttttcataaaatgcctttgaa---atctttt-cc-ttttttaa-attgaaacgc--gtctttttctagagtt---------gtattctgaatatatctc-------------cattgttggatatatatattgcaaac-atttttt-ccatttagtagtttctttaaattaacagaagttcttcattttaatgtaaacatgttcatcagttt--tttatg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6253335 227 - 8369475 gctga--------------------------------------------------------------------ccagc------------------ttttcacatctgggtg-tttggat-ttcatttttcataaaatgcctttgaa---atctttt-cctttttttaa-attgaaacac--gtctttttctagagtt-------ctgtattctgaatatatctc-------------cattgttggatgtatatattgcaaac-atttttt-ccatttagtagtttctttaaattaacagaagttcttcattttaatgtaaacatgttcatcagttt--tttatg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63848327 227 - 106955855 gctga--------------------------------------------------------------------ccacc------------------ttttcatatttgggtc-tttggat-ttcatttttcataaaatgcctttgaa---atcttttgcc-tttttaaa-attgaaacat--gtctttttctagagtt-------ctgtattctgaatatatatc-------------cattgttggatgtatatattgcaaac-atttttt-ccatttagtagtttcttttaatgaacagaagttcctcattttaatgtaaacatgttcatcagttt--tttatg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30156892 223 + 53671032 g-------------------------------------------------------------------------cacc------------------ttttcatatctgggtc-tttggat-ttcatttttcatgaagtgtctttgaa---atcttttgcc-ttttttaa-attgaaacac--gtctttttctagagtt-------ttgtattctgaatatatatc-------------ctttgttggatgtatatattgcaaac-tttttttcccacttagtagtttcttttaatgaacagaagttcttcgttttaatgtaaacatgttcatcaattt--tttatg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34609764 223 + 59248254 g-------------------------------------------------------------------------cacc------------------ttttcatatctgggtc-tttggat-ttcatttttcatgaagtgtctttgaa---atcttttgcc-ttttttaa-attgaaacac--gtctttttctagagtt-------ttgtattctgaatatatatc-------------ctttgttggatgtatatattgcaaac-tttttttcccacttagtagtttcttttaatgaacagaagttcttcgttttaatgtaaacatgttcatcaattt--tttatg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4477859 223 - 13342542 g-------------------------------------------------------------------------cacc------------------ttttcatatctgggtc-tttggat-ttcatttttcatgaagtgtctttgaa---atcttttgcc-ttttttaa-attgaaacac--gtctttttctagagtt-------ttgtattctgaatatatatc-------------ctttgttggatgtatatattgcaaac-tttttttcccacttagtagtttcttttaatgaacagaagttcttcgttttaatgtaaacatgttcatcaattt--tttatg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5408342 225 + 7714307 g-------------------------------------------------------------------------tacc------------------ttttcatatctgggtc-tttggat-ttcatttttcatcaagtgtctttgaa---atcttttgcc-ttttttaa-attgaaacacatgtctttttctagagtt-------ttgtattctgaatatatatg-------------ctttgttggatgtatatattgcaaac-tttttttcccatttagtagtttcttttaatgaacagaagttcttcgttttaatgtaaacatgttcatcaattt--tttacg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29216208 226 + 50890351 g-------------------------------------------------------------------------cacc------------------ttttcatatctgggtc-tttggat-ttcatttttcatgaagtgtctttgaa---atcttttgcc-tttttaaa-attgaaacacatatctttttctagagtt-------ttgtattctgaatatgtatc-------------ctttgttggatgtatatattgcaaacatttttttcccatttagtagtttcttttaatgaacagaagttcttcgttttaatgtaaacatgttcatcaattt--tttatg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 829720 225 - 2385121 g-------------------------------------------------------------------------tacc------------------ttttcatatctgggtc-tttggat-ttcatttttcattaagtgtctttgaa---atcttttgcc-ttttttaa-attgaaacacatgtctttttctagagtt-------ttgtattctgaatatatatg-------------ctttgttggatgtatatattgcaaac-ttttttccccatttagtagtttcttttaatgaacagaagttcttcgttttaatgtaaacatgttcatcaattt--tttatg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2275169 231 + 4274983 gctga--------------------------------------------------------------------ccacc------------------ttttcatatctgggtc-tttggat-ttcatttttcatgaagtgtctttgaa---atcttttgct-ttttctaa-attgaaacacgtgtctttttctagagtt-------ttgtattctgaatatatatc-------------ctttgttggatgtatatattgcaaacatttttttcccatttagtagtttcttttaatgaacagaagttcttcattttaatgtaaacatgttcatcaattt--tttatg i colAng1.NW_012111697v1 C 0 C 0 s mm10.chr7 111055853 295 - 145441459 gctgaaagtcAGA--TGTGCT-CTTAACTACTTCAG---TCTCATGAATGTGGTTTTAGTCCCTAGTTCTCTGTCAGCTAGTGAGTTTTGGAGGTATTTCCTTATCTAAGCC-ATTTGATGTTCATCTTTACTTAAGTGCCTTGGAAGTTACCACTTACT-TTCC------------CAC--ATCATTTTCTGGAGTT-------TTGAGTTCTAATAACACATC-------------CT---TTGGATGTATTTATTGCAAGT-GTCTTTTTCTATGTAGTGGTTTCTTATTGTAGATAGA---TCTTTATTTTAATTTAGGCATGTTTATTAGGCT--TTTCTT i mm10.chr7 I 110 I 5 s canFam3.chr1 4565288 273 - 122678785 gctgaaggcaggaactaaactgctgagccacccaggGATCCCCCtgga--------------------------cacg------------------ttttcatatcctagtcatttggat-ttcatctttcgtgaagcacctttgaa---atcttttgcc-cattttactactgaaatgcagatctttttctagagtt-------caccattctgggtatgagta-------------ctttgctgagtatatctgttgcaaat-atcttttcccacttgatggcttcttttggtgaacagaagttc---attttaatgtagatatgtttatcactctaatttatg i canFam3.chr1 I 35 C 0 s dasNov3.JH563638 271985 210 + 643850 ----------------------------------------------------------------------------------------------GATTTTTCTGTTGAAATG-TGTGGGG-TGCCCTGTGCCTGGAGCA-----GGC---CTCACCTACA-CCTAGAGA-CGAGTAATCT--GTTGTTTTCTGTTGTTTTGTCGTTTGTGTTCTCACCATTTCTCAATAAACTATTGGCCTAACTGGAAAAAAAAAGTGTGGGG-TTTTTCT--------GTAGT---GTTCCAGGAGTATGAATCCTTTTttttttttt--------------tttt--tttaag i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3921669 1171 - 30143674 I e otoGar3.GL873654 5422500 6496 + 5549422 I e aotNan1.NW_018505377v1 309815 2250 - 4471408 I e cebCap1.NW_016107633v1 1561001 1908 - 2680843 I e saiBol1.JH378197 5348305 1756 + 8899380 I e calJac3.chr22 28506282 1456 + 49145316 I a score=262780.000000 s hg38.chr19_GL383574v1_alt 24991 37 + 155864 gctag-----------------------------------tg-tttcttttttt-----------------------------------aaaacatcatagagatact s panTro5.chr19 36083805 37 + 61309027 gctag-----------------------------------tg-tttcttttttt-----------------------------------aaaacatcatagagatact i panTro5.chr19 C 0 C 0 s panPan2.chr19 39835792 37 + 64411610 gctag-----------------------------------tg-tttcttttttt-----------------------------------aaaacatcatagagatact i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6253562 37 - 8369475 gctag-----------------------------------tg-tttcttttttt-----------------------------------aaaacatcatagagatact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63848554 37 - 106955855 gctag-----------------------------------tg-tttcttTTTTT-----------------------------------AAAACAtcatagagatact i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30157115 37 + 53671032 gctag-----------------------------------tg-ttttttTTTTT-----------------------------------TAAACAtcatggagatact i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34609987 37 + 59248254 gctag-----------------------------------tg-ttttttttttt-----------------------------------taaacatcatggagatact i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4478082 38 - 13342542 gctag-----------------------------------tgtttttttttttt-----------------------------------taaacatcatggagatact i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5408567 37 + 7714307 gctag-----------------------------------tg-ttttttTTTTA-----------------------------------AAAACATTATGGAGATACT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29216434 36 + 50890351 gctag-----------------------------------tg--tttttttttt-----------------------------------aaaacatcatggagatact i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 829945 38 - 2385121 gctag-----------------------------------tgttttttTTTTTT-----------------------------------AAAACATTATGGAGATACT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2275400 37 + 4274983 gctag-----------------------------------tg-tttcttttttt-----------------------------------aaaacatcatggagatact i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28507738 36 + 49145316 gcaag-----------------------------------tg-tttcctttttt------------------------------------aaacatcatggagatact i calJac3.chr22 I 1456 C 0 s saiBol1.JH378197 5350061 36 + 8899380 gcaag-----------------------------------tg-tttcttttttg------------------------------------aaacatcacggagatact i saiBol1.JH378197 I 1756 C 0 s mm10.chr7 111056153 107 - 145441459 GCTAGGTGGGTGGTGTGGttttttttttttttgttttttttg-ttttttttttttctttATTCCTGTTAATAACCTACTTTTCCTTAATTCAGTACTATGGAAATACT i mm10.chr7 I 5 C 0 s canFam3.chr1 4565561 57 - 122678785 gctag-----------------------------------tg-tttttcttctt---------------ttaaagaatttttccctaccacaaggtcatgaagatatt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 272195 38 + 643850 ----g-----------------------------------aa-tttttttttat------------------------------ctactccagggtcatggagattct i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3921669 1171 - 30143674 I e otoGar3.GL873654 5422500 6496 + 5549422 I e aotNan1.NW_018505377v1 309815 2250 - 4471408 I e cebCap1.NW_016107633v1 1561001 1908 - 2680843 I a score=104254.000000 s hg38.chr19_GL383574v1_alt 25028 9 + 155864 ttgattatc s panTro5.chr19 36083842 9 + 61309027 ttgattatc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39835829 9 + 64411610 ttgattatc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6253599 9 - 8369475 ttgattatc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63848591 9 - 106955855 ttgattatc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30157152 9 + 53671032 ttgattatc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610024 9 + 59248254 ttgattatc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4478120 9 - 13342542 ttgattatc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5408604 9 + 7714307 TTGAttatc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29216470 9 + 50890351 ttgattatc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 829983 9 - 2385121 TTGATTATC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2275437 9 + 4274983 ttgattatc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28507774 9 + 49145316 ttgattatc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5350097 9 + 8899380 ttgattatc i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 312065 9 - 4471408 ttgattatc i aotNan1.NW_018505377v1 I 2250 C 0 s mm10.chr7 111056260 6 - 145441459 ---Tttatc i mm10.chr7 C 0 I 2 s canFam3.chr1 4565618 9 - 122678785 ttgataact i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 272233 8 + 643850 -tcattatc i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3921669 1171 - 30143674 I e otoGar3.GL873654 5422500 6496 + 5549422 I e cebCap1.NW_016107633v1 1561001 1908 - 2680843 I a score=46683.000000 s hg38.chr19_GL383574v1_alt 25037 3 + 155864 ttt s panTro5.chr19 36083851 3 + 61309027 ttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39835838 3 + 64411610 ttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6253608 3 - 8369475 ttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63848600 3 - 106955855 ttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30157161 3 + 53671032 ttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610033 3 + 59248254 ttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4478129 3 - 13342542 ttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5408613 3 + 7714307 ttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29216479 3 + 50890351 ttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 829992 3 - 2385121 TTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2275446 3 + 4274983 ttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28507783 3 + 49145316 ttt i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5350106 3 + 8899380 ttt i saiBol1.JH378197 C 0 I 1 s aotNan1.NW_018505377v1 312074 3 - 4471408 ttt i aotNan1.NW_018505377v1 C 0 I 1 s micMur3.chr22 3922840 3 - 30143674 ttt i micMur3.chr22 I 1171 C 0 s mm10.chr7 111056268 3 - 145441459 ttt i mm10.chr7 I 2 C 0 s canFam3.chr1 4565627 3 - 122678785 ttt i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 272241 3 + 643850 ttt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e otoGar3.GL873654 5422500 6496 + 5549422 I e cebCap1.NW_016107633v1 1561001 1908 - 2680843 I a score=1767694.000000 s hg38.chr19_GL383574v1_alt 25040 139 + 155864 -aaacctttttgtgctttgctttttcacattgacgtttataatgcatctgaaattgattttgtgtacaatgtgagatattcagagctttatatttAGTAAGGGATTCACTTGG-------TTTA---TATTGTCCATATTATAATTTAGG s panTro5.chr19 36083854 139 + 61309027 -aaacctttttgtgctttgctttttcacattgacgtttataatgcatctgaaattgattttgtgtacaatgtgagataTTCAGAGCTTTACATTTAGTAAGGGATTCACTTGG-------TTTA---TATTGTCCATATTATAATTTAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39835841 139 + 64411610 -aaacctttttgtgctttgctttttcacattgacgtttataatgcatctgaaattgattttgtgtacaatgtgagataTTCAGAGCTTTACATTTAGTAAGGGATTCACTTGG-------TTTA---TATTGTCCATATTATAATTTAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6253611 139 - 8369475 -aaacctttttgtgctttgctttttcacattgacgtttgtaatgcatctgaaattgattttgtgtacaatgtgagataTTCAGAGCTTTACATTTAGTAAGGGATTCACTTGG-------TTTA---TATTGTCCATATTATAATTTAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63848603 139 - 106955855 -aaacctctttgtgctttgctttttcacattgaggtttataatgcatctgaaattgattttgtgtacaatgtgagatgttcagagctttatgtttAGTAAGGGATTCACTTGG-------TTTA---TATGGTCCATATTATAATTTAGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30157164 139 + 53671032 -aaacctttttgtgctttgctttttcacattgaggtttataatgcatctgaaattgattttgtgtacaatgtgagatGTTCAGAGCTTTACATTTAGTAAGGGATTCACTTGG-------TTTA---TACGGTCCATATTATAATGTAGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610036 139 + 59248254 -aaacctttttgtgctttgctttttcacattgaggtttataatgcatctgaaattgattttgtgtacaatgtgagatGTTCAGAGCTTTACATTTAGTAAGGGATTCACTTGG-------TTTA---TACGGTCCATATTATAATGTAGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4478132 139 - 13342542 -aaacctttttgtgctttgctttttcacattgaggtttataatgcatctgaaattgattttgtgtacaatgtgagatGTTCAGAGCTTTACATTTAGTAAGGGATTCACTTGG-------TTTA---TACGGTCCATATTATAATGTAGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5408616 139 + 7714307 -aaacctttttgtgctttgctttttcacattgaggtttataatgcatctgaaattgattttgtgtacaatgtgagatGTTCAGAGCTTTACATTTAGTAAGGGATTCACTTGG-------TTTA---TACGGTCCATATTATAATGTAGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29216482 139 + 50890351 -aaacctttttgtgctttgctttttcacattgaggtttataatgcatctgaaattgattttgtgtacaatgtgagatGTTCAGAGCTTTACATTTAGTAAGGGATTCACTTGG-------TTTA---TACGGTCCATATTATAATGTAGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 829995 139 - 2385121 -AAACCTTTTTGTGCTTTGCTTtttcacattgaggtttataatgcatctgaaattgattttgtgtacaatgtgagatGTTCAGAGCTTTACATTTAGTAAGGGATTCACTTGG-------TTTA---TACGGTCCATATTATAATGTAGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2275449 135 + 4274983 -aaacctttttgtgctttgctttttcatattgaggtttataatgcatctgaaattgattttgtgtacaatgtgagatGTTCAGAGCTTTACAT----TAAGGGATTCACTTGG-------TTTC---TACAGTCCATATTATAATGTAGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28507787 136 + 49145316 -aaacctttctgggctttgctttttcacgttgaggtttataatacatgtgaaatggattttgtgtacaatgtgagatGTTCGGAGCTTTAAATTTAGTAAGGGATTCACTTGG-------TTTA---TATGGCTCA---TATAATTTAGA i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5350110 135 + 8899380 -aaacctttttgggctttgc-ttttcacgttgaggtttataatgcatgtgaaattgattttgtgtacaatgtgagatGTTCAGAGCTTTAAATTTAGTAAGGGATTCACTTGG-------TTTA---TATGGCTCA---TATAATTTGGA i saiBol1.JH378197 I 1 C 0 s cebCap1.NW_016107633v1 1562909 136 - 2680843 -aaacctttttgggctttgctttttcacattgaggtttataatgcatgtgaaattgattttgtgtgcaatgtgagatGTTCAGAGCTTTAAATTTAGTAAGGGATTCACTTGG-------TTTA---TATGGCTCA---TATAATTTAGA i cebCap1.NW_016107633v1 I 1908 C 0 s aotNan1.NW_018505377v1 312078 136 - 4471408 -aaacctttttgggctttgctgtttcacattgaggtttatagtgcatgtgaaattgattttgtgtacaatgtgagatGTTCAGAGCTTTAAATTTAGTAAGGGATTCATTTGG-------TTTA---TATGGCTCA---TATAATTTAGA i aotNan1.NW_018505377v1 I 1 C 0 s micMur3.chr22 3922843 139 - 30143674 -aaacctttttttgttctggtttttcaccttgatgtctataatgcacctgaaattgattttgtatgcagtgtcaagtaTTTAGATGTTTAAATTTAGTAAGGAATTCACTTGG-------TTTA---TATGATCCATATTACAATTTAGG i micMur3.chr22 C 0 I 200 s mm10.chr7 111056271 139 - 145441459 -agaatgtattttattttgctttttcacatttaggtctataatgcttctaaaactggttttgtatatggCAGAGACTATTTAGATCTTTAACTTAAGTAAAAGATTCACTTGG-------CTTT---TATGGTTTGTATTATGATTTAGG i mm10.chr7 C 0 C 0 s canFam3.chr1 4565633 77 - 122678785 -aaacttttttgt--tttgctttttcac------------------------------------------------------------taaatttagTAAGGGATTCACTTGG-------CTTA---TATGATCTAGATTAAAATTTACA i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 272244 149 + 643850 gaaagcttttt-tgttttgctttttcacgtttaagtctataatgcacctgaaactgactttgtgtatggtatgaggtaATTAGATCTTTAAATTTAATGAGGATTTAATGAGGGATTAAATTTAATGTATGATCCAGATAATAATTTAAG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e otoGar3.GL873654 5422500 6496 + 5549422 I a score=96103.000000 s hg38.chr19_GL383574v1_alt 25179 9 + 155864 ------GCTTGGATA s panTro5.chr19 36083993 9 + 61309027 ------GCTTGGATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39835980 9 + 64411610 ------GCTTGGATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6253750 9 - 8369475 ------GCTTGGATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63848742 9 - 106955855 ------GCTTGGATA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30157303 9 + 53671032 ------GCTTGGATA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610175 9 + 59248254 ------GCTTGGATA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4478271 9 - 13342542 ------GCTTGGATA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5408755 9 + 7714307 ------GCTTGGATA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29216621 9 + 50890351 ------GCTTGGATA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 830134 9 - 2385121 ------GCTTGGATA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2275584 9 + 4274983 ------GCTTGGATA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28507923 9 + 49145316 ------TCTTGGATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5350245 9 + 8899380 ------TCTTGGATA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1563045 9 - 2680843 ------TCTTGGATA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 312214 9 - 4471408 ------TCTTGGATA i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111056410 9 - 145441459 ------TCTTTTACA i mm10.chr7 C 0 I 10 s canFam3.chr1 4565710 7 - 122678785 --------TTTGGTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 272393 15 + 643850 TTCCTTTCTTAGATA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3922982 200 - 30143674 I e otoGar3.GL873654 5422500 6496 + 5549422 I a score=370032.000000 s hg38.chr19_GL383574v1_alt 25188 27 + 155864 ----TTA-TAATTTAAATATAT-CTGGAACTAT s panTro5.chr19 36084002 27 + 61309027 ----TTA-TAATTTAAATATAT-CTGGAACTAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39835989 27 + 64411610 ----TTA-TAATTTAAATATAT-CTGGAACTAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6253759 27 - 8369475 ----TTA-TAATTTAAATATAT-CTGGAACTAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63848751 27 - 106955855 ----TTA-TAATTTAAATATAT-CTGGAACTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30157312 27 + 53671032 ----TTA-TAATTTAAATGTAT-CTGGAACTAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610184 27 + 59248254 ----TTA-TAATTTAAATGTAT-CTGGAACTAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4478280 27 - 13342542 ----TTA-TAATTTAAATGTAT-CTGGAACTAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5408764 27 + 7714307 ----TTA-TAATTTAAATGTAT-CTGGAACTAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29216630 27 + 50890351 ----TTA-TAATTTAAATGTAT-CTGGAACTAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 830143 27 - 2385121 ----TTA-TAATTTAAATGTAT-CTGGAACTAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2275593 27 + 4274983 ----TTA-TAAGTTAAATACAT-CTGGAACTAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28507932 27 + 49145316 ----TTA-TAATTTAAATATAT-CTGGAACTCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5350254 27 + 8899380 ----TTA-TAATTTAAATATAT-CTGGAACTGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1563054 27 - 2680843 ----TTA-TATTTTAAACATAT-CTGGAACTAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 312223 27 - 4471408 ----TTA-TAATTTAAGTATAT-CTGGAACTGT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3923182 28 - 30143674 ----TTA-TAATTTAAATATATCCCGGAACTAT i micMur3.chr22 I 200 C 0 s mm10.chr7 111056429 27 - 145441459 ----ATA-TAGTTTACATATAG-CTGGAACTAT i mm10.chr7 I 10 C 0 s canFam3.chr1 4565717 28 - 122678785 ----TTACTTATTTAAATTCAT-GTGGAACTAT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 272408 31 + 643850 TTACTTC-TCATTTAAATCCAT-GTGGAGCTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e otoGar3.GL873654 5422500 6496 + 5549422 I a score=38402.000000 s hg38.chr19_GL383574v1_alt 25215 3 + 155864 AAA s panTro5.chr19 36084029 3 + 61309027 AAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836016 3 + 64411610 AAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6253786 3 - 8369475 AAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63848778 3 - 106955855 AAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30157339 3 + 53671032 GAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610211 3 + 59248254 GAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4478307 3 - 13342542 GAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5408791 3 + 7714307 GAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29216657 3 + 50890351 GAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 830170 3 - 2385121 GAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2275620 3 + 4274983 AAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28507959 3 + 49145316 AAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5350281 3 + 8899380 AAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1563081 3 - 2680843 AAA i cebCap1.NW_016107633v1 C 0 I 144 s aotNan1.NW_018505377v1 312250 3 - 4471408 AAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3923210 3 - 30143674 AAA i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5428996 3 + 5549422 AAA i otoGar3.GL873654 I 6496 C 0 s mm10.chr7 111056456 3 - 145441459 ATA i mm10.chr7 C 0 C 0 s canFam3.chr1 4565745 3 - 122678785 ACA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 272439 3 + 643850 AAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T a score=1590796.000000 s hg38.chr19_GL383574v1_alt 25218 109 + 155864 CTACTCTTG-AAATTTTTGGCTATTTACATTTGATGTGGTATATAATtagggtaaccatatggcctagtttgccctggtggaaagtccttgtttgtgcctgct---ctggcat s panTro5.chr19 36084032 109 + 61309027 CTACTCTTG-AAATTTTTGACTATTTACATTTGATGTGGTATATAATtagggtgaccatatggcctagtttgccctggtggaaagtccttgtttgtgcctgct---ctggcat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836019 109 + 64411610 CTACTCTTG-AAATTTTTGACTATTTACATTTGATGTGGTATATAATtagggtgaccatatggcctagtttgccctggtggaaagtccttgtttgtgcctgct---ctggcat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6253789 108 - 8369475 CTACTCTTG-AAATTTTTGGCTA-TTACATTTGATGTGGTATATAATtagggtgaccatatggcctagtttgccctggtggaaagtccttgtttgtgcctgct---ctggcat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63848781 109 - 106955855 CTACTCTTG-AAATTTTTGGCTATTTACATTTGATGTGGTATATAATtagggcaaccatatggcctagtttgccctggtggaaagtctttgtttgtgcctgct---ctggcat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30157342 109 + 53671032 CTACTCTTG-AAAGTTTGGACTATTTACATTTGATGTGGTATATAATtagggtgaccatatggcctactatgccctggtggaaagtccttgtttgtgcctgtt---ctggcat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610214 109 + 59248254 CTACTCTTG-AAAGTTTGGACTATTTACATTTGATGTGGTATATAATtagggtgaccatatggcctagtatgccctggtggaaagtccttgtttgtgcctgtt---ctggcat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4478310 109 - 13342542 CTACTCTTG-AAAGTTTGGACTATTTACATTTGATGTTGTATATAATtagggtgaccatatggcctagtatgccctggtggaaagtccttgtttgtgcctgtt---ctggcat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5408794 109 + 7714307 CTACTCTTG-AAAGTTTGGACTATTTACATTTGATGTGGTATATAATtagggtgaccatatggcctagtatgccctggtggaaagtccttgtttgtgcctgtt---gtggcat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29216660 109 + 50890351 CTACTCTTG-AAAGTTTGGACTATTTACATTTGATGTGGTATATAATtagggtgaccatatggcctagtatgccctggtggaaagtccttgtttgtgcctgtt---ctggcat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 830173 109 - 2385121 CTACTCTTG-AAAGTTTGGACTATTTACATTTGATGTGGTATATAATtagggtgaccatatggcctagtatgccctggtggaaagtccttgtttgtgcctgtt---ctggcat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2275623 109 + 4274983 CTACTCTTG-AAATTTTGGACTATTTACATTTGATGTGGTATATAATtagggtgaccatatggcctagtttgccctggtggaaagtccttgtttgtgcctgtt---ctggcat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28507962 109 + 49145316 CTACTCTTG-AAATTTTTGACTCTTTAAATTTGATGTGGTATATAATtacggtgatcatatggcccagtttgccctggtggaaactccttgtttatgcctgct---ctggcat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5350284 109 + 8899380 CTACTCTTG-AAATTTTTGACTCTTTATATTTGATGTGGTATGTAATtagggtgaccatatggcccagtttgccctggtggaaagtccttgtttgtgcctgct---ctggcat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1563228 109 - 2680843 cTACTCTTG-AAATTTTTGACTCTTTACATTTGATGTGGTATGTAATtagggtgaccatatggtccagtttgccctggtggaaagtccttatttgtgcctgct---ctggcat i cebCap1.NW_016107633v1 I 144 C 0 s aotNan1.NW_018505377v1 312253 97 - 4471408 CTACTCTTG-AAATTTTTGACTCTTTACATTTGATGTGGTATGTAATTA------------GGTCCAGTTTGTCCTGGTGGAAAGTCCTTGTTTGTGCCTGCT---CTGGCAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3923213 109 - 30143674 TTACTCTTG-AAGTTTTTGGCTAGTTACATTCCATGTGGCATGTAATtatggtgcccatatggcctggtttccccgggtggaaagtccttgtttgtgcctctt---ctggcat i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5428999 112 + 5549422 TTGCTCTTGAAAGTTTTTGCCTAATTACATTTGATGTGGCATAT-ATTTTggtgcccatatggcctggtttgccctggtgagaagtccttatttacgtctgttccactggcat i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111056459 67 - 145441459 ATTCTTTTG-ATATTTTGGCTAGTTAACATTTG-TATGGTATAGAAT-----------------------------------------TCATTTATGCTTGTT---TTAATGT i mm10.chr7 C 0 C 0 s canFam3.chr1 4565748 112 - 122678785 ATGCTCTTA-AAATTTTGGATTAGTTACATTTGATGTTGTATATAGTtagggtaaccatatggcctggtttgccctggtggaaggtccttgtttgttcctgttgttctggcat i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 272442 109 + 643850 CTGCTCTTG-AAATTTTTGGCTATTTATATTTGATGTGATATTTAATTAGGGTAACCATAAGGCCTAGTTTGCCTTGGTGAAAAGTTCTTGCTTGTGCCTGTT---CTCGCAT i dasNov3.JH563638 C 0 I 2 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T a score=210908.000000 s hg38.chr19_GL383574v1_alt 25327 14 + 155864 aatt-attaaaaaca s panTro5.chr19 36084141 14 + 61309027 aatt-attaaaaaca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836128 14 + 64411610 aatt-attaaaaaca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6253897 14 - 8369475 aatt-attaaaaaca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63848890 14 - 106955855 aatt-attaaaaaca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30157451 14 + 53671032 aatt-attaaaaaca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610323 14 + 59248254 aatt-attaaaaaca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4478419 14 - 13342542 aatt-attaaaaaca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5408903 14 + 7714307 aatt-attaaaaaca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29216769 14 + 50890351 aatt-attaaaaaca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 830282 14 - 2385121 aatt-attaaaaaca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2275732 14 + 4274983 aatt-attaaaaaca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508071 14 + 49145316 AATT-ATTAAAAACA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5350393 14 + 8899380 aatt-gctaaaaaca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1563337 14 - 2680843 aatt-attaaaaaca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 312350 14 - 4471408 AATT-ATTAAAAACA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3923322 14 - 30143674 aatt-attaaaaaca i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5429111 15 + 5549422 aattaataaAAAACA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111056526 14 - 145441459 CATT-ATTAAAAGCA i mm10.chr7 C 0 C 0 s canFam3.chr1 4565860 13 - 122678785 aatt-attaaaa-ca i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e dasNov3.JH563638 272551 2 + 643850 I a score=59787.000000 s hg38.chr19_GL383574v1_alt 25341 4 + 155864 tccc s panTro5.chr19 36084155 4 + 61309027 tccc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836142 4 + 64411610 tccc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6253911 4 - 8369475 tccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63848904 4 - 106955855 tccT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30157465 4 + 53671032 tccc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610337 4 + 59248254 tccc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4478433 4 - 13342542 tccc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5408917 4 + 7714307 tccc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29216783 4 + 50890351 tccc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 830296 4 - 2385121 tccc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2275746 4 + 4274983 tccc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508085 4 + 49145316 TCTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5350407 4 + 8899380 tccc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1563351 4 - 2680843 ttcc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 312364 4 - 4471408 TCCC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3923336 4 - 30143674 tccc i micMur3.chr22 C 0 I 437 s otoGar3.GL873654 5429126 4 + 5549422 TCCC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4565873 4 - 122678785 tccc i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e dasNov3.JH563638 272551 2 + 643850 I e mm10.chr7 111056540 0 - 145441459 C a score=31225.000000 s hg38.chr19_GL383574v1_alt 25345 3 + 155864 ggc s panTro5.chr19 36084159 3 + 61309027 ggc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836146 3 + 64411610 ggc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6253915 3 - 8369475 ggc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63848908 3 - 106955855 ggc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30157469 3 + 53671032 Agc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610341 3 + 59248254 Agc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4478437 3 - 13342542 Agc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5408921 3 + 7714307 Agc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29216787 3 + 50890351 Agc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 830300 3 - 2385121 Agc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2275750 3 + 4274983 ggc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508089 3 + 49145316 Agc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5350411 3 + 8899380 Agc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1563355 3 - 2680843 Agc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 312368 3 - 4471408 Agc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5429130 3 + 5549422 GGC i otoGar3.GL873654 C 0 I 706 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923340 437 - 30143674 I e dasNov3.JH563638 272551 2 + 643850 I e mm10.chr7 111056540 0 - 145441459 C e canFam3.chr1 4565877 0 - 122678785 C a score=2777348.000000 s hg38.chr19_GL383574v1_alt 25348 279 + 155864 tgggcagggtgactcaggcctgtaatcc---caacatttccaaaaggtcaaggccggggtattgcttgagcccaggagttcaaaaccagcctcggcaatacagggagactccatttctacaaaaaattttaaaaagtgcattagccaagcatggtggcatgcatgtctgtcgtcccagccacttgggaggctgaggc-------a-gggggattgcttgagcccaagaggagctgtgatcatgccactgcactccagcctgaaacatagaacaagaccttgtcttaaaaa s panTro5.chr19 36084162 279 + 61309027 tgggcagggtgactcaggcctgtaatcc---caacatttccaaaaggtcaaggccggggtattgcttgagcccaggagttcaaaaccagcctcggcaatatagggagactccatttctacaaaaaattttaaaaagtgcattagccaagcatggtggcatgcatgtctgtcgtcccagccacttgggaggctgaggc-------a-gggggattgcttgagcccaagaggagctgtgatcatgccactgcactccagcctgaaacatagaacaagaccttgtctttaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836149 279 + 64411610 tgggcagggtgactcaggcctgtaatcc---caacatttccaaaaggtcaaggccggggtattgcttgagcccaggagttcaaaaccagcctcggcaatatagggagactccatttctacaaaaaattttaaaaagtgcattagccaagcatggtggcatgcatgtctgtcgtcccagccacttgggaggctgaggc-------a-gggggattgcttgagcccaagaggagctgtgatcatgccactgcactccagcctgaaacatagaacaagaccttgtctttaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6253918 278 - 8369475 tgggcagggtgactcaggcctgtaatcc---caacatttccaaaaggtcaaggccggggtattgcttgagcccaggagttcaaaaccagccttggcaatatagggagactccatttctacaaaaaattttaaaaagtgaattagccaagcatggtggcatgcatgtctgtcgtcccagccacttgggaggctgaggc-------a--ggggattgcttgagcccaagaggagctgtgatcatgccactgcactccagcctgaaacatagaacaagaccttgtcttaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63848911 279 - 106955855 tgggcagggtgactcaggcctgtaatcc---caccatttccaaaaggttgaggccggagtattgcttgagcccaggagttcaaaaccagcctcggcaatatatggagactccatttctacaaaaaattttaaaaagtaaattagccaagcatggtggcatgcatgtctgtcgtcccagccacttgggaggctgagac-------a-gggggattgcttgagcccaagaggagctgtgatcatgccactgcactccagcctgagacatagaacaagaccttgtcttaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30157472 283 + 53671032 taggcagggtgactcaggcctgtaatcccaacaacatttccaaaaggtcgaggccggagtattgcttgagcctaggaattcaaaaccagcctcagcaatatagggagactccatttctacaaaaaattataaaaagtaaattagccaagcatggtggcatgtatgcctgtcgtctcgaccacttgggaggctgaggc-------aggggggattgcttgagcccaagaggagctgtgatcatgccactgcactccagcctgagacatagaacaaaaccttgtcttacaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610344 283 + 59248254 taggcagggtgactcaggcctgtaatcccaacaacatttccaaaaggtcgaggccggagtattgcttgagcctaggagttcaaaaccagcctcagcaatatagggagactccatttctacaaaaaattataaaaagtaaattagccaagcatggtggcatgtatgcctgtcgtctcgaccacttgggaggctgaggc-------aggggggattgcttgagcccaagaggagctgtgatcatgccactgcactccagcctgagacatagaacaaaaccttgtcttacaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4478440 283 - 13342542 taggcagggtgactcaggcctgtaatcccaacaacatttccaaaaggtcgaggccggagtattgcttgagcctaggagttcaaaaccagcctcagcaatatagggagactccatttctacaaaaaattataaaaagtaaattagccaagcatggtggcatgcatgcctgtcgtctcgaccacttgggaggctgaggc-------aggggggattgctggagcccaagaggagctgtgatcatgccactgcactccagcctgagacatagaacaaaaccttgtcttacaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5408924 283 + 7714307 taggcagggtgactcaggcctgtaatcccaacaacatttccaaaaggtcgaggccggagtattgcttgagcccaggagttcaaaaccagcctcagcaatatagggagactccatttctacaaaaaattataaaaagtaaattagccaagcatagtggcatgcatgcctgtcgtctcgaccacttgggaggctgaggc-------aggggggattgcttgagcccaagaggagctgtgatcatgccactgcactccagcctgagacatagaacaaaaccttgtcttacaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29216790 284 + 50890351 taggcagggtgactcaggcctgtaatcccaacaacatttccaaaaggtcgaggccggagtattgcttgagcccaggagttcaaaaccagcctcagcaatatagggagactccatttctacaaaaaattataaaaagtaaattagccaagcatggtggcatgcatgcctgtcgtctcgaccacttgggaggctgaggc------aaggggggattgcttgagcccaagaggagctgtgatcatgccactgctctccagcctgagacatagaacaaaaccttctcttacaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 830303 283 - 2385121 taggcagggtgactcaggcctgtaatcccaacaacatttccaaaaggtcgaggccggagtattgcttgagcccaggagttcaaaaccagcctcagcaatatagggagactccatttctacaaaaaattataaaaagtaaattagccaagcatagtggcatgcatgcctgtcgtctcgaccacttgggaggctgaggc-------aggggggattgcttgagcccaagaggagctgtgatcatgccactgcactccagcctgagacatagaacaaaaccttgtcttacaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2275753 288 + 4274983 cgggcagggtgactcaggcctgtaatcccaacaacatttccaaaaggtcgaggccgaagtattgcttgagcccaggagttcaaaaccagcctcagcaatatagggagactccatttctacaaaaaattataaaaagtaaattagccaagcatggtggcatgcatgcctgtcgtctcgactacttgggaggctgagaccaggcgggggggagattgcttgagcctaagaggagctgtgatcatgccactgcactccagcctgagac--agaacaaaaccttgtcttacaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508092 282 + 49145316 tggacagggtgactcaggtctgtaatcccagtaacatttccaaaaggctgaggccagaggattgcttgagcccaggagttcaaaatcagcctcaacaatacagggagactccttctctacaaaaaaatttaaaaagtaaattagccaggcatggtggcatgcatgcctgtcatcccagctacttcagaggctgaggc-------a-ggaggattgcttgagcccaagcggagctgtgatcatgccactgcactccagcctgagccacggaacaagacgttgtcttaaaaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5350414 282 + 8899380 tggacagggtgactcaggtctataatcccaataacatttctcaaaggctgagaccagaggattgcttgagcccaggagttcaaaatcagcctcaacaatacagggagattccatctctacaaaaaaatttaaaaagtacattagccaagcgtggtggcatgcatgcctgttgtcccagctacttgggaggctgaggc-------a-ggaggattgcttgagcccaagaggagttgtgatcatgccactgcactccagcctgaaccacggaacaagacattgtcttaaaaa i saiBol1.JH378197 C 0 I 321 s cebCap1.NW_016107633v1 1563358 282 - 2680843 tggacagggtgactcaggcctataatcccaataacatttccaaaaggctgaggccagaggattgcttgagcccaggagttcaaaattagcctcaacaatacagggagactccatctctacaaaaaaatttaaaaagtaaattagccaagcatggtggcatgcatgcctgtcgtcccagctacttgggaggctgagct-------a-ggaggattgcttgagcccaaggggagctgtgatcgtgccactgcactccagcctgagccacggaacaagacattgtcttaaaaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 312371 282 - 4471408 taggcggggtgactcaggtctataatcccaataacatttccaaaagactgaggccaggggattgcttgagcccaggaattcaaaatcagcctcaacagtacagggagactccatctctacaaaaaactttaaaaagtaaattagccaagcatggtggcatgcatgcctgtcgtcccagctacttgggaggctgaggc-------a-ggaggattgcttgagcccaagaggagctgtgatcatgccactgcactccagcctgacccacggaacaagacattgtcttaaaaa i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923340 437 - 30143674 I e dasNov3.JH563638 272551 2 + 643850 I e otoGar3.GL873654 5429133 706 + 5549422 I e mm10.chr7 111056540 0 - 145441459 C e canFam3.chr1 4565877 0 - 122678785 C a score=1599419.000000 s hg38.chr19_GL383574v1_alt 25627 176 + 155864 ---ataacaatgatagcctgtaatcccagcacttcaggaagctgaggcaggc---gaatcacctgaagtcagaagctcgagaccagtctggccaacatggcgaaaccccgtctctactaaaaatacaaaaattatctgggcgtgctggtgcatgtctgtaatcccagctacttgagaggctg s panTro5.chr19 36084441 179 + 61309027 ---ataacaatgatagcctgtaatcccagcacttcaggaagctgaggcaggccgcgaatcacctgaagtcagaagctcgagaccagtctggccaacatggcgaaaccccgtctctactaaaaatacaaaaattagctgggcgtgctggtgcatgtctgtaatcccagctacttgagaggctg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836428 179 + 64411610 ---aTAACAATGATAgcctgtaatcccagcacttcaggaagctgaggcaggccgcgaatcacctgaagtcagaagctcgagaccagtctggccaacatggcgaaaccccgtctctactaaaaatacaaaaattagctgggcgtgctggtgcatgtctgtaatcccagctacttgagaggctg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254196 176 - 8369475 ---ataacaatgatagcctgtaatcccagcacttcaggaagctgaggcaggc---gaatcacctgaagtcagaagctcgagaccagtctggccgacatggcgaaaccccgtctctactaaaaatacaaaaattagctgggcgtgctggtgcatgtctgtaatcccagctacttgagaggctg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849190 176 - 106955855 ---aTAACAATGATAgcctgtaatcccagcactttaggaggctgaggcaggc---gaatcacctgaagtcagaagctcgagaccagtctggccaacatggcgaaaccccgtctctactaaaaatacaaaaattagccgggtgtgctggtgcatgtctgtaatcccagctacttgagaggctg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30157755 171 + 53671032 ---GTAACA---GTAgcctgtaatcccagcacttccggaggctgaggcaggc---aaatcccctgaagtcagaagttcgagaccaatctagccaacatggcgaaaccccatctctactaaaaatacaaaaattagccaggcatgctggtgca--tctgtaatcccatctacttgagaggctg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610627 171 + 59248254 ---GTAACA---GTAgcctgtaatcccagcacttccggaggctgaggcaggc---aaatcccctgaagtcagaagttcgagaccaatctagccaacatggcgaaaccccgtctctactaaaaatacaaaaattagccaggcatgctggtgca--tctgtaatcccatctacttgagaggctg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4478723 171 - 13342542 ---GTAACA---GTAgcctgtaatcccagcacttccggaggctgaggcaggc---aaatcccctgaagtcagaagttcgagaccaatctagccaacatggcgaaaccccgtctctactaaaaatacaaaaattagccaggcatgctggtgca--tctgtaatcccatctacttgagaggctg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5409207 173 + 7714307 ---GTAACA---GTAgcctgtaatcctagcacttccggaggctgaggcaggc---aaatcccctgaagtcagaagtttgagaccaatctagccaacatggcgaaaccccgtctctactaaaaatacaaaaattagccaggcatgctggtgcatgtctgtaatcccatctacttgagaggctg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217074 173 + 50890351 ---GTAACA---GTAgcctgtaatcccagcacttctggaggctgaggcaggc---aaatcccctgaagtcagaagttcgagaccaatctagccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccaggcatgctggtgcatgtctgtaatcccagctacttgagaggcta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 830586 173 - 2385121 ---GTAACA---GTAgcctgtaatcccagcacttccggaggctgaggcaggc---aaatcccctgaagtcagaagttcgagaccaatctagccaacatggcgaaaccccgtctctactaaaaatacaaaaattagccaggcatgctggtgcatgtctgtaatcccatctacttgagaggctg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276041 173 + 4274983 ---GTAACA---ATAgcctgtaatcccagcacttccggaggctgaggcaggc---aaatcacctgaagtcagaagtttgagaccaatctggccaacatggcgaaaccccgtctctattaaaaatacaaaaattagccaggcatgctggtgcacgtctgtaatcccagctacttgagaggcta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508374 173 + 49145316 ---aTACTA---ATAAcctgtaatcccagcatttctggagactgaggagggc---tgatcacctgaagtcaggagtttgagaccagcctggccaacatggctagacaccatctctactaaatatacagaaattagccctgtgtgctggtacacatctgtaatcccagctacttgagacgttg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351017 176 + 8899380 ATAATAATA---ATAgcctgtaatcccagcacttctggagaccaaggagggc---ttgtcacctgaagtcaggagtttgagaccagcctggccaacatggcgaaacaccatctctactaaaaatacagaaattagctgggtgtgctggtacacatctgtaatcccagctacttgagaggttg i saiBol1.JH378197 I 321 C 0 s cebCap1.NW_016107633v1 1563640 157 - 2680843 ---aTAATA---ATAgcctgtaatcccagcacttctggagaccgaggagggc---tgatcacctgaagtcaggagtttgaggccagcctggccaacatggcg----------------aaaaatacagaaattagcctggtgtgctggtacacatctgtaatcctagctacttgagaggttg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 312653 173 - 4471408 ---aTAATA---ATAgcctgtaatcccagcacttccggagaccgaggagggc---tgatcacctgaagtcaggagtttgagaccagcctggccaacatggcgaaacaccgtctctactaaaaatacagaaattagccgggtgtgctggtacacatctgtaatcctagctacttgagaggttg i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923340 437 - 30143674 I e dasNov3.JH563638 272551 2 + 643850 I e otoGar3.GL873654 5429133 706 + 5549422 I e mm10.chr7 111056540 0 - 145441459 C e canFam3.chr1 4565877 0 - 122678785 C a score=840348.000000 s hg38.chr19_GL383574v1_alt 25803 91 + 155864 aggcaggagaattgcttgaacctgaaa--ggc---ggaggttagagtgagccaagatc------------------acaccactgtactctagcctgggcaacagagcgagact s panTro5.chr19 36084620 91 + 61309027 aggcaggagaattgcttgaacctgaaa--ggc---gaaggttagagtgagccaagatc------------------acaccactgtactctagcctgggcaacagagcgagact i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836607 91 + 64411610 aggcaggagaattgcttgaacctgaaa--ggc---gaaggttagagtgagccaagatc------------------acaccactgtactctagcctgggcaacagagcgagact i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254372 90 - 8369475 aggcaggagaattgcttgaacctgaaa--ggc---ggaggttagagtgagccaagatc------------------acaccactgtactctagcctgggcaa-agagcgagact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849366 91 - 106955855 aggcaggagaatcacttgaacctgaaa--gat---ggaggttagagtgagccaagatc------------------gcaccactgtactctagcctgggcaacagagcgagact i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30157926 94 + 53671032 aggcaggagaatcacttgaactcgaaa--ggcggaggaggttagagtgagccaaggtc------------------gcgtcactgtaccctagcccaggcaacacagcgagact i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610798 94 + 59248254 aggcaggagaatcacttgaactcgaaa--ggcggaggaggttagagtgagccaaggtc------------------gcgtcactgtactctagcccaggcaacacagcgagact i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4478894 94 - 13342542 aggcaggagaatcacttgaactcgaaa--ggcggaggaggttagagtgagccaaggtc------------------gcgtcactgtactctagcccaggcaacacagcgagact i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5409380 94 + 7714307 aggcaggagaatcacttgaactcgaaa--ggcggaggaggttagagtgagccaaggtc------------------gcgtcactgtactctagcccaggcaacacagcgagact i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217247 94 + 50890351 aggcaagagaatcacttgaactcgaaa--ggcggaggaggttagagtgagccaaggtc------------------gcgtcactgtactctagcccgggcaacacagcgagact i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 830759 94 - 2385121 aggcaggagaatcacttgaactcgaaa--ggcggaggaggttagagtgagccaaggtc------------------gcgtcactgtactctagcccaggcaacacagcgagact i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276214 91 + 4274983 aggcaggagaatcacttgaactcgaaa--ggc---ggaggttagagtgagccaaggtc------------------acgtgactgtactctagcctgggcaacacagcgagact i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508547 93 + 49145316 aggcaggagaatcactggaacacaaaaggggg---ggaggttgcagtgagctgagatt------------------gctccactgtactcgagcctgggcgacagagcaagact i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351193 91 + 8899380 aggcaggagaatcactggaacccaaaa--ggt---ggaggttgcagtgagctgagatt------------------gttccactctactcgagcctgggcgacagagcaagact i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1563797 91 - 2680843 aggcaggagaatcactggaacccaaaa--ggt---ggaggctgaagtgaactgaggtt------------------cctccattgtactcgagcctaggcgacagagcgagact i cebCap1.NW_016107633v1 C 0 I 18 s aotNan1.NW_018505377v1 312826 91 - 4471408 aggcaggagaatcattggaacccaaaa--ggc---ggaggttgcagtgagctgagatt------------------gctccactgtacttgagcctgggcggcagagcgagact i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5429839 107 + 5549422 agccaagagaatctcttaagcccaaga--gtt---ggaggttgctgtgagctgtggtccttttcaggtccttttcagcgccatggtact--acccagggcgacattatgagact i otoGar3.GL873654 I 706 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923340 437 - 30143674 I e dasNov3.JH563638 272551 2 + 643850 I e mm10.chr7 111056540 0 - 145441459 C e canFam3.chr1 4565877 0 - 122678785 C a score=89514.000000 s hg38.chr19_GL383574v1_alt 25894 11 + 155864 ctgtctcaaaa s panTro5.chr19 36084711 11 + 61309027 ctgtctcaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836698 11 + 64411610 ctgtctcaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254462 11 - 8369475 ctgtctcaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849457 11 - 106955855 ctgtctcaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158020 11 + 53671032 gtgtcttaaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610892 11 + 59248254 gtgtcttaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4478988 11 - 13342542 gtgtcttaaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5409474 11 + 7714307 gtgtcttaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217341 11 + 50890351 gtgtcttaaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 830853 11 - 2385121 gtgtcttaaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276305 11 + 4274983 gtgtcttaaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508640 9 + 49145316 ttgtctc--aa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351284 11 + 8899380 ctgtctcaaaa i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 312917 11 - 4471408 ctgtctcgaaa i aotNan1.NW_018505377v1 C 0 I 10 s otoGar3.GL873654 5429946 11 + 5549422 ctgtctcaaaa i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923340 437 - 30143674 I e dasNov3.JH563638 272551 2 + 643850 I e mm10.chr7 111056540 0 - 145441459 C e canFam3.chr1 4565877 0 - 122678785 C e cebCap1.NW_016107633v1 1563888 18 - 2680843 I a score=7819.000000 s hg38.chr19_GL383574v1_alt 25905 2 + 155864 aa s panTro5.chr19 36084722 2 + 61309027 aa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836709 2 + 64411610 aa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254473 2 - 8369475 aa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849468 2 - 106955855 aa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158031 2 + 53671032 ca i rheMac8.chr19 C 0 I 10 s macFas5.chr19 34610903 2 + 59248254 ca i macFas5.chr19 C 0 I 10 s macNem1.NW_012011689v1 4478999 2 - 13342542 ca i macNem1.NW_012011689v1 C 0 I 10 s cerAty1.NW_012005268v1 5409485 2 + 7714307 ca i cerAty1.NW_012005268v1 C 0 I 10 s chlSab2.chr6 29217352 2 + 50890351 ca i chlSab2.chr6 C 0 I 2 s manLeu1.NW_012102454v1 830864 2 - 2385121 ca i manLeu1.NW_012102454v1 C 0 I 32 s colAng1.NW_012111697v1 2276316 2 + 4274983 CA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508649 2 + 49145316 aa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351295 2 + 8899380 aa i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5429957 2 + 5549422 aa i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923340 437 - 30143674 I e dasNov3.JH563638 272551 2 + 643850 I e mm10.chr7 111056540 0 - 145441459 C e canFam3.chr1 4565877 0 - 122678785 C e aotNan1.NW_018505377v1 312928 10 - 4471408 I e cebCap1.NW_016107633v1 1563888 18 - 2680843 I a score=9127.000000 s hg38.chr19_GL383574v1_alt 25907 4 + 155864 aaaa s panTro5.chr19 36084724 4 + 61309027 aaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836711 4 + 64411610 aaaa i panPan2.chr19 C 0 I 21 s gorGor5.CYUI01015150v1 6254475 4 - 8369475 aaaa i gorGor5.CYUI01015150v1 C 0 I 3 s nomLeu3.chr10 63849470 4 - 106955855 aaaa i nomLeu3.chr10 C 0 I 5 s rheMac8.chr19 30158043 4 + 53671032 caca i rheMac8.chr19 I 10 C 0 s macFas5.chr19 34610915 4 + 59248254 caca i macFas5.chr19 I 10 C 0 s macNem1.NW_012011689v1 4479011 4 - 13342542 caca i macNem1.NW_012011689v1 I 10 C 0 s cerAty1.NW_012005268v1 5409497 4 + 7714307 cgca i cerAty1.NW_012005268v1 I 10 C 0 s chlSab2.chr6 29217356 4 + 50890351 caca i chlSab2.chr6 I 2 C 0 s colAng1.NW_012111697v1 2276318 2 + 4274983 --CA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508651 4 + 49145316 aaTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351297 4 + 8899380 aaTA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5429959 4 + 5549422 aaaa i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923340 437 - 30143674 I e dasNov3.JH563638 272551 2 + 643850 I e mm10.chr7 111056540 0 - 145441459 C e canFam3.chr1 4565877 0 - 122678785 C e aotNan1.NW_018505377v1 312928 10 - 4471408 I e cebCap1.NW_016107633v1 1563888 18 - 2680843 I e manLeu1.NW_012102454v1 830866 32 - 2385121 I a score=-23903.000000 s hg38.chr19_GL383574v1_alt 25911 9 + 155864 aa----aacac--------aa- s panTro5.chr19 36084728 13 + 61309027 aaccacaaaat--------aa- i panTro5.chr19 C 0 I 1 s gorGor5.CYUI01015150v1 6254482 9 - 8369475 aa----aacac--------aa- i gorGor5.CYUI01015150v1 I 3 I 6 s nomLeu3.chr10 63849479 9 - 106955855 aa----GCCAC--------AA- i nomLeu3.chr10 I 5 C 0 s rheMac8.chr19 30158047 9 + 53671032 ca----cacac--------aa- i rheMac8.chr19 C 0 I 1 s macFas5.chr19 34610919 9 + 59248254 ca----cacac--------aa- i macFas5.chr19 C 0 I 1 s macNem1.NW_012011689v1 4479015 9 - 13342542 ca----cacac--------aa- i macNem1.NW_012011689v1 C 0 I 1 s cerAty1.NW_012005268v1 5409501 17 + 7714307 ca----cacacacaataataa- i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29217360 7 + 50890351 ca----cacac----------- i chlSab2.chr6 C 0 I 17 s colAng1.NW_012111697v1 2276320 9 + 4274983 CA----CACAC--------aa- i colAng1.NW_012111697v1 C 0 I 10 s calJac3.chr22 28508655 4 + 49145316 -----------------GTAA- i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5351301 4 + 8899380 -----------------GTAA- i saiBol1.JH378197 C 0 I 1 s otoGar3.GL873654 5429963 6 + 5549422 ----------------agaaaa i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923340 437 - 30143674 I e dasNov3.JH563638 272551 2 + 643850 I e mm10.chr7 111056540 0 - 145441459 C e canFam3.chr1 4565877 0 - 122678785 C e aotNan1.NW_018505377v1 312928 10 - 4471408 I e cebCap1.NW_016107633v1 1563888 18 - 2680843 I e manLeu1.NW_012102454v1 830866 32 - 2385121 I e panPan2.chr19 39836715 21 + 64411610 I a score=30030.000000 s hg38.chr19_GL383574v1_alt 25920 5 + 155864 aataa s panTro5.chr19 36084742 5 + 61309027 aataa i panTro5.chr19 I 1 C 0 s panPan2.chr19 39836736 5 + 64411610 aataa i panPan2.chr19 I 21 C 0 s gorGor5.CYUI01015150v1 6254497 5 - 8369475 aataa i gorGor5.CYUI01015150v1 I 6 C 0 s nomLeu3.chr10 63849488 5 - 106955855 AATAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158057 5 + 53671032 aataa i rheMac8.chr19 I 1 C 0 s macFas5.chr19 34610929 5 + 59248254 aataa i macFas5.chr19 I 1 C 0 s macNem1.NW_012011689v1 4479025 5 - 13342542 aataa i macNem1.NW_012011689v1 I 1 C 0 s cerAty1.NW_012005268v1 5409519 5 + 7714307 aataa i cerAty1.NW_012005268v1 I 1 C 0 s chlSab2.chr6 29217384 5 + 50890351 aataa i chlSab2.chr6 I 17 C 0 s manLeu1.NW_012102454v1 830898 5 - 2385121 aataa i manLeu1.NW_012102454v1 I 32 C 0 s colAng1.NW_012111697v1 2276339 5 + 4274983 aataa i colAng1.NW_012111697v1 I 10 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923340 437 - 30143674 I e dasNov3.JH563638 272551 2 + 643850 I e otoGar3.GL873654 5429969 0 + 5549422 C e mm10.chr7 111056540 0 - 145441459 C e canFam3.chr1 4565877 0 - 122678785 C e aotNan1.NW_018505377v1 312928 10 - 4471408 I e cebCap1.NW_016107633v1 1563888 18 - 2680843 I e saiBol1.JH378197 5351305 1 + 8899380 I e calJac3.chr22 28508659 1 + 49145316 I a score=9555.000000 s hg38.chr19_GL383574v1_alt 25925 1 + 155864 t s panTro5.chr19 36084747 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836741 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254502 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849493 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158062 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610934 1 + 59248254 t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479030 1 - 13342542 t i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5409524 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217389 1 + 50890351 t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 830903 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276344 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508660 1 + 49145316 T i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5351306 1 + 8899380 T i saiBol1.JH378197 I 1 C 0 s cebCap1.NW_016107633v1 1563906 1 - 2680843 T i cebCap1.NW_016107633v1 I 18 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923340 437 - 30143674 I e dasNov3.JH563638 272551 2 + 643850 I e otoGar3.GL873654 5429969 0 + 5549422 C e mm10.chr7 111056540 0 - 145441459 C e canFam3.chr1 4565877 0 - 122678785 C e aotNan1.NW_018505377v1 312928 10 - 4471408 I a score=98280.000000 s hg38.chr19_GL383574v1_alt 25926 9 + 155864 aataataat s panTro5.chr19 36084748 9 + 61309027 aataataat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836742 9 + 64411610 aataataat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254503 9 - 8369475 aataataat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849494 9 - 106955855 AATAATAAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158063 9 + 53671032 aataataat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610935 9 + 59248254 aataataat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479031 9 - 13342542 aataataat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5409525 9 + 7714307 aataataat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217390 9 + 50890351 aataataat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 830904 9 - 2385121 aataataat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276345 9 + 4274983 aataataat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508661 9 + 49145316 AATAATAAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351307 9 + 8899380 AATAATAAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1563907 9 - 2680843 AATAATAAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 312938 9 - 4471408 aataataat i aotNan1.NW_018505377v1 I 10 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923340 437 - 30143674 I e dasNov3.JH563638 272551 2 + 643850 I e otoGar3.GL873654 5429969 0 + 5549422 C e mm10.chr7 111056540 0 - 145441459 C e canFam3.chr1 4565877 0 - 122678785 C a score=38675.000000 s hg38.chr19_GL383574v1_alt 25935 3 + 155864 CTG s panTro5.chr19 36084757 3 + 61309027 CTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836751 3 + 64411610 CTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254512 3 - 8369475 CTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849503 3 - 106955855 CTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158072 3 + 53671032 CTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610944 3 + 59248254 CTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479040 3 - 13342542 CTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5409534 3 + 7714307 CTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217399 3 + 50890351 CTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 830913 3 - 2385121 CTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276354 3 + 4274983 CTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508670 3 + 49145316 CTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351316 3 + 8899380 CTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1563916 3 - 2680843 CTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 312947 3 - 4471408 CTG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5429969 2 + 5549422 -TG i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 272553 3 + 643850 CTT i dasNov3.JH563638 I 2 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923340 437 - 30143674 I e mm10.chr7 111056540 0 - 145441459 C e canFam3.chr1 4565877 0 - 122678785 C a score=5005.000000 s hg38.chr19_GL383574v1_alt 25938 1 + 155864 T s panTro5.chr19 36084760 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836754 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254515 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849506 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28508673 1 + 49145316 T i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351319 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1563919 1 - 2680843 T i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 312950 1 - 4471408 T i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4565877 1 - 122678785 t i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 272556 1 + 643850 T i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923340 437 - 30143674 I e otoGar3.GL873654 5429971 0 + 5549422 C e mm10.chr7 111056540 0 - 145441459 C e chlSab2.chr6 29217402 0 + 50890351 C e colAng1.NW_012111697v1 2276357 0 + 4274983 C e manLeu1.NW_012102454v1 830916 0 - 2385121 C e cerAty1.NW_012005268v1 5409537 0 + 7714307 C e macNem1.NW_012011689v1 4479043 0 - 13342542 C e macFas5.chr19 34610947 0 + 59248254 C e rheMac8.chr19 30158075 0 + 53671032 C a score=1060503.000000 s hg38.chr19_GL383574v1_alt 25939 93 + 155864 TTTCTCTTTTGAAAATGT-TTCAGTGTGG---ATAAGTT--A--------TCACACC--ACA--TAATCA-------AAAGCCTAAT-TGCAGAGGT-GCTGTGAAATGGTCGATGTGCC s panTro5.chr19 36084761 93 + 61309027 TTTCTCTTTTGAAAATGT-TGCAGTGTGG---ATAAGTT--A--------TCACACC--ATA--TAATCA-------AAAGCCTAAT-TGCAGAGGT-GCTGTGAAATGGTTGATGTGCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836755 93 + 64411610 TTTCTCTTTTGAAAATGT-TGCAGTGTGG---ATAAGTT--A--------TCACACC--ATA--TAATCA-------AAAGCCTAAT-TGCAGAGGT-GCTGTGAAATGGTTGATGTGCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254516 93 - 8369475 TTTCTCTTTTGAAAATGT-TTCAGTGTGG---ATAAGTT--A--------TCACACC--ATA--TAATCA-------AAAGCCTAAT-TGCAGAGGT-GCTGTGAAATGGTTGATGTGCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849507 93 - 106955855 TTTCTCTCTTGAAAATGT-TGCAGTGTGG---ATAAGTT--A--------TCACGCC--ATA--TAATCA-------AAAGCCTAAT-TGCAGAGGT-GCTGTGAAATGGTTGATGTGCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158075 93 + 53671032 TTTCTCTCTTGAAAATGT-TTCAGTGTGG---ATAAGTT--A--------TCGCACC--ATG--TAATCA-------AAAGCCTAAT-TGCAGAGGT-GCTGTGAAATGGGTGATGTGCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34610947 93 + 59248254 TTTCTCTCTTGAAAATGT-TTCAGTGTGG---ATAAGTT--A--------TCGCACC--ATG--TAATCA-------AAAGCCTAAT-TGCAGAGGT-GCTGTGAAATGGGTGATGTGCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479043 93 - 13342542 TTTCTCTCTTGAAAATGT-TTCAGTGTGG---ATAAGTT--A--------TCGCACC--ATG--TAATCA-------AAAGCCTAAT-TGCAGAGGT-GCTGTGAAATGGGTGATGTGCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5409537 93 + 7714307 TTTCTCTCTTGAAAATGT-TTCAGTGTGG---ATAAGTT--A--------TCGCACC--ATA--TAATCA-------AAAGCCTAAT-TGCAGAGGT-GCTGTGAAATGGGTGATGTGCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217402 93 + 50890351 TTTCTCTCTTGAAAATGT-TTCAGTGTGG---ATAAGTT--A--------TCACACC--ATA--TAATCA-------AAAACCTAAT-TGCAGAAGT-GCTGTGAAATGGATGATGTGCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 830916 93 - 2385121 TTTCTCTCTTGAAAATGT-TTCAGTGTGG---ATAAGTT--A--------TCGCACC--ATA--TAATCA-------AAAGCCTAAT-TGCAGAGGT-GCTGTGAAATGGGTGATGTGCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276357 93 + 4274983 TTTCTCTCTTGAAAATGT-TTCAGTGTGG---ATAAGTT--A--------TCGCATC--ATA--TAATCA-------AAACCCTAAT-TGCAGAGGT-GCTCTGAAATGGGTGATGCGCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508674 92 + 49145316 TTTCTCTCTTGAAAATGT-TTTAGTATGG---ATAAGTT--A--------TCACACC--AAA--TAATCA-------AAGGCCTAAT-TGCAGAGGT-GCTATGAAATGGGT-ATGCCCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351320 93 + 8899380 TTTCTCTCTTGAAAATGT-TTCAGTATGG---ATAAATT--A--------CCACACC--ATA--TAATCA-------AAAGCCTAAT-TGCAGAGGT-GTTATGAAATGGTTGATGCCCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1563920 93 - 2680843 TTTCTCTCTTGAAAATGT-TTCAGTATGG---ATAAGTT--A--------TCACACC--ATA--TAAGCA-------AAAGCCTAAT-TGCAGAGGT-GCTATGAAATGGGTGATGCCCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 312951 93 - 4471408 TTTCTCTCTTGAAAATGT-TTCAGTATGG---ATAAGTT--A--------TCACACC--ATA--CAATCA-------AAAGCCTAAT-TGCAGAGGT-GCTATGAAATGGGAGATGCCCT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5429971 83 + 5549422 TTCCCACCCTCAAGATATATATTGTATGG---------------------TCCCACT--GCA--TAATCA-------GAAG--TAAT-TGCAGACGT-G-TGCTAAGTGAACAGTGCCCT i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111056540 97 - 145441459 TTGCTCTTTT---AATGT-TCCAGATTGGGTAATAAATTGAA--------TCCACCC--ACA-CTAATAAGAAGGTGAAAGCCTAATCTGGATTGGT--------AATGGTTGGTTTCCC i mm10.chr7 C 0 C 0 s canFam3.chr1 4565878 104 - 122678785 tttctctcttgaaaatgt-tccagtttgg---ctaatat--atttaatggtcacactaAATA--TAATCA-------AAAGCCCAAT-CCCAGAGGTAGTAACTAACTGCGTGATGTTCT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 272557 86 + 643850 TTTTTCTCTTGAAAATAT-TACAGTTTGA---ACA------G--------TCACTCT--ATGTCTAACCA-------AGAG-----T-TCCAGAGGT-ATTGCTAAATGAGTATTGTTCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923340 437 - 30143674 I a score=1255432.000000 s hg38.chr19_GL383574v1_alt 26032 89 + 155864 TTATTTTCTGCTAGAGATGTCACAGACTAGCTTTA---GTTC--TA-GAAAGTGAAAC--AGGTAAGTTTGAGGGGCTTTGATCCTCGGAACC----TAAG s panTro5.chr19 36084854 89 + 61309027 TTATTTTCTGCTAGAGATGTCACAGACTAGCTTTA---GTTC--TA-AAAAGTGAAAC--AGGTAAGTTTGAGGGGCTTTGATCCTCGGAACC----TAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836848 89 + 64411610 TTATTTTCTGCTAGAGATGTCACAGACTAGCTTTA---GTTC--TA-AAAAGTGAAAC--AGGTAAGTTTGAGGGGCTTTGATCCTCGGAACC----TAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254609 89 - 8369475 TTATTTTCTGCTAGAGATGTCACAGACTAGCTTTA---GTTC--TA-GAAAGTGAAAC--AGGTAAGTTTGAGGGGCTTTGATCCTCGGAATC----TAAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849600 89 - 106955855 TTATTTTCTGTTAGAGATGTCACAGACTAGCTTTA---GTTC--TA-GAAAGTGAAAC--AGGTAAGTTTGAGGGGCTTTGATCCTCGGAACC----TAAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158168 89 + 53671032 TTATTTTCTGCTAGAGATGTCACAGACTAGCTTTA---GTTC--TA-GCAAGTGAAAC--AGGTAAGTTTGAGGGGCTTTGATCCTTGGAACC----TAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611040 89 + 59248254 TTATTTTCTGCTAGAGATGTCACAGACTAGCTTTA---GTTC--TA-GCAAGTGAAAC--AGGTAAGTTTGAGGGGCTTTGATCCTTGGAACC----TAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479136 89 - 13342542 TTATTTTCTGCTAGAGATGTCACAGACTAGCTTTA---GTTC--TA-GCAAGTGAAAC--AGGTAAGTTTGAGGGGCTTTGATCCTTGGAACC----TAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5409630 89 + 7714307 TTATTTTCTGCTAGAGATGTCACAGACTAGCTTTA---GTTC--TA-GCAAGTGAAAC--AGGTAAGTTTGAGGGGCTTTGATCCTTGGAACC----TAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217495 89 + 50890351 TTATTTTCTGCTAGAGATGTCACAGACTAGCTTTA---GTTC--TA-TCAAGTGAAAC--AGGTAAGTTTGAGGGGCTTTGATCCTTGGAACC----TAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831009 89 - 2385121 TTATTTTCTGCTAGAGATGTCACAGACTAGCTTTA---GTTC--TA-GCAAGTGAAAC--AGGTAAGTTTGAGGGGCTTTGATCCTTGGAACC----TAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276450 89 + 4274983 TTTTTTTCTGCTAGAGATGTCACAGACTAGCTTTA---GTTC--TA-GCAAGTGAAAC--AGGTAAGTTTGAGGGGCTTTGATCCTTGGAACC----TAAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508766 87 + 49145316 TTATTTTCTGCTAGAGATTTCACAGACTAGCTTTA---GTTC--AA---AAGTGAAAC--AGGTAAGTTTGAGGGCCTTTGATCCTCAGAACC----TAAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351413 87 + 8899380 TTATTTTCTGCTGGAGATTTCACAGACTAGCTTTA---GTTC--TA---AAGTGAAAC--AGGTAAGTTTGAGGGCCTTTGATCCTCACAACC----TAAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1564013 87 - 2680843 TTATTTTCTGCTAGAGATTTCACAGACTAGCTTTA---GTTC--TA---AAGTGAAAC--AGGTAAGTTTGAGGGCCTTTGATCCTCAGAACC----TAAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 313044 86 - 4471408 TTATTTTCTGCTAGAGATTTCACAGACTAGCTTTA---GTTC--TA---AAGTGAAAC--AGGTAAGTTTGAGGGCCTTTGATCCTCA-AACC----TAAG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3923777 91 - 30143674 TTATTTTCTGCTACAGATTGCACAGACTAGCTCTA---GATT--TA-TAAAGTGAAACTGAGGTACGTTTTATGGAATTTGATCCTCAGAACC----TAAG i micMur3.chr22 I 437 I 14 s otoGar3.GL873654 5430055 93 + 5549422 TTTTTTTCTGGTAGAGATTTCATTGACTAGCTCCATCTAGTT--TA-T-GAGAGAAACTCAGCTAAGTTTGATGGACTTTCAGTCGCAGAACC----TAAG i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111056637 90 - 145441459 TTGTATTCTGCTAGAGTTTTTATAAATTAACTACC----TTC--TA-GAAGGTGAAACCCAGATAAGTTTCATGGCCTTTGATCCTAACAACC----TAAC i mm10.chr7 C 0 C 0 s canFam3.chr1 4565982 90 - 122678785 TTATTTTCT-CTAGAGAT-TCACAGACTAGCTCAA---GTTC--TGTAAAGGTGAAATTGAAGTAAATTTGATGGGCTTTGATACCCAGGATC----TTCT i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 272643 97 + 643850 TTATTTTCTTTTAGAGATTTTACAGACTAGCTCTA---TTTCTGTA-AAAAGTGAAATTGAGGTAAGTTTGATGGATTTTGATGCTGAGAACCTTTTTAAG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T a score=209536.000000 s hg38.chr19_GL383574v1_alt 26121 17 + 155864 CATATGTCAAGAAGTCA s panTro5.chr19 36084943 17 + 61309027 CATGTGTCAAGAAGTCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836937 17 + 64411610 CATGTGTCAAGAAGTCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254698 17 - 8369475 CATATGTCAAGAAGTCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849689 17 - 106955855 CATATGTCAAGAAGTCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158257 17 + 53671032 CATATGTCAAGAAGTCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611129 17 + 59248254 CATATGTCAAGAAGTCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479225 17 - 13342542 CATATGTCAAGAAGTCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5409719 17 + 7714307 CATATGTCAAGAAGTCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217584 17 + 50890351 CATATGTCAAGAAGTCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831098 17 - 2385121 CATATGTCAAGAAGTCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276539 17 + 4274983 CATATGTCAGGAAGTCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508853 17 + 49145316 CATATGTCAAGAAGTCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351500 17 + 8899380 CATATGTCAAGAAGTCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1564100 17 - 2680843 CATATGTCAAGAAGTCA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 313130 17 - 4471408 CATATGTCAAGAAGTCA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5430148 14 + 5549422 TCAGTGTCAAGTTT--- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111056727 17 - 145441459 TAAATGTCAGGAAGTCT i mm10.chr7 C 0 I 1 s canFam3.chr1 4566075 17 - 122678785 TGAATGTCAGGCAGTTT i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 272740 17 + 643850 TAAATACCAAAATGTCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923868 14 - 30143674 I a score=1184609.000000 s hg38.chr19_GL383574v1_alt 26138 85 + 155864 TAAAGGCAACCTAGAAAGGCTTTGATGTCAATCTGCTATG------TATGTTTATAGATGATCTGTGTTGCAGTTTGTT-----TCTGCAGTTTGT s panTro5.chr19 36084960 85 + 61309027 TAAAGGCAACCCAGAAAGGCTTTGATGTCAATCTGCTATG------TATGTTTATAGATGATCTGTGTTGCAGTTTGTT-----TCTGCAGTTTGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39836954 85 + 64411610 TAAAGGCAACCCAGAAAGGCTTTGATGTCAATCTGCTATG------TATGTTTATAGATGATCTGTGTTGCAGTTTGTT-----TCTGCAGTTTGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254715 85 - 8369475 TAAAGGCAACCTAGAAAGGCTTTGATGTCAATCTGCTATG------TATGTTTATAGATGATCTGTGTTGCAGTTTGTT-----TCTGCAGTTTGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849706 85 - 106955855 TAAAGGCAACCTAGAAAGGCTTTGATGTCAGTCTGCTACG------TATGTTTATAGATGATCTGTGTTGCAGTTTGCT-----TCTGCAGTTTGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158274 85 + 53671032 TAAAGGCAACCTAGAAAGGCTTTGATGTCAATCTGCTAAG------TATGTTTATAGATGATCTGTGTTGCAGTTTGTT-----TCTGCCATTTGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611146 85 + 59248254 TAAAGGCAACCTAGAAAGGCTTTGATGTCAATCTGCTAAG------TATGTTTATAGATGATCTGTGTTGCAGTTTGTT-----TCTGCCATTTGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479242 85 - 13342542 TAAAGGCAACCTAGAAAGGCTTTGATGTCAATCTGCTAAG------TATGTTTATAGATGATCTGTGTTGCAGTTTGTT-----TCTGCCATTTGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5409736 85 + 7714307 TAAAGGCAACCTAGAAAGGCTTTGATGTCAATCTGCTAAG------TATGTTTATAGATGATGTGTGTTGCAGTTTGTT-----TCTGCCATTTGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217601 85 + 50890351 TAAAGGCAACCTAGAAAGGCTTTCATGTCAATCTGCTAAG------TATGTTTATAGATGATCTGTGTTGCAGTTTGTT-----TCTGCCGTTTGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831115 85 - 2385121 TAAAGGCAACCTAGAAAGGCTTTGATGTCAATCTGCTAAG------TATGTTTATAGATGATCTGTGTTGCAGTTTGTT-----TCTGCCATTTGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276556 85 + 4274983 TAAAGGCAACCTAGAAAGGCTTTGATGTCAATCTGCTAAG------TATGTTTGTAGATGATCTGTGTTGCAGTTTGTT-----TCTGCCGTTTGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508870 84 + 49145316 TAAAGGCAA-CTGGAAAGGCTTTGCTGTCAATCTGTTAAG------TATCTTTATAGATGATCTGGGTTGTAGTTTGTT-----TCTGCAGTTTGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351517 85 + 8899380 TAAAGGCAACCTGGAAAGGCTTTGATATCAATCTGTTAAG------TGTCTTTATAGATGATCTGGGTTGCAGTTTGTT-----TCTGTAGTTTGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1564117 85 - 2680843 TAAAGGCAACCTGGAAAGGCTTTGATGTCAATCTGTTAAG------TGTCTTTATAGATGATCTGGGTTGCAGTTTGTT-----TCTACAGTTTGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 313147 85 - 4471408 TAAAGACAACCTGGAAAGGCTTTGATGTCAATCTGTTAAG------TGTCTTTATAGATGATCTGGGTTGCAGTTTGTT-----TCTGCAGTTTGT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3923882 91 - 30143674 TAAAAGCAACCTAGAAAGGCTTTGATGTTAATCTTTTAAGTATTAATATGTTTATAGATAATCTGGGTTGCAGTTTGTT-----TTTGCAATTTGT i micMur3.chr22 I 14 I 56 s otoGar3.GL873654 5430162 85 + 5549422 TAAAAGCAACCTAGGGAGGCTTTGATGTTAATCTGTTAAG------TATGTTTACAGATAATAGGAGTTGCAGTTTGTT-----TGGGCAGTTTGT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111056745 87 - 145441459 AAAGGGCAATCTGAAATGACATTGACAGTCACTTTTTAAG------TGTGTTTGTAGATAATCTGGGCCATGGTGTTTTCAGCATCTGCTTTT--- i mm10.chr7 I 1 C 0 s canFam3.chr1 4566092 73 - 122678785 TAAAGGCAA-CTAGAAAGAC--TGGTGTCTGTCTTTTAAG------CATGTTAATAGATCATTTGGTCTGTAGTTTGTC-----TCT--------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 272757 68 + 643850 TAAAGACAACCTATAGAGGCTTTAATGTTGACCTATTAAG------TATGTTTATAAATAATCTGGGTTGAGGT---------------------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T a score=91231.000000 s hg38.chr19_GL383574v1_alt 26223 7 + 155864 TGCAGTT s panTro5.chr19 36085045 7 + 61309027 TGCAGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837039 7 + 64411610 TGCAGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254800 7 - 8369475 TGCAGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849791 7 - 106955855 TGCAGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158359 7 + 53671032 TGCAGTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611231 7 + 59248254 TGCAGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479327 7 - 13342542 TGCAGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5409821 7 + 7714307 TGCAGTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217686 7 + 50890351 TGCAGTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831200 7 - 2385121 TGCAGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276641 7 + 4274983 TGCAGTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508954 7 + 49145316 TACAGTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351602 7 + 8899380 TACAGTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1564202 7 - 2680843 TACAGTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 313232 7 - 4471408 TACAGTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5430247 7 + 5549422 TGCAATT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111056832 7 - 145441459 AGCAGCT i mm10.chr7 C 0 I 1039 s canFam3.chr1 4566165 7 - 122678785 TGGAGCT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923973 56 - 30143674 I e dasNov3.JH563638 272825 0 + 643850 C a score=883803.000000 s hg38.chr19_GL383574v1_alt 26230 75 + 155864 TGTAGTCTGTGTCACAGCTCTGAATTTATTTTCTTCTCAGCACTGATCATGACTTACAC------TTAATCTTCTTTGCTT s panTro5.chr19 36085052 75 + 61309027 TGTAGTCTGTGTCACAGCTCTTAATTTATTTTCTTCTCAGCACTCATCATGACTTACAC------GTAATCTTCTTTGCTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837046 75 + 64411610 TGTAGTCTGTGTCACAGCTcttaatttattttcttctcagcactcatcatgacttacac------gtaatcttctttgctt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254807 75 - 8369475 TGTGGTCTGTGTCACAGCTCTGAATTTATTTTCTTCTCAGCACTGATCATGACTTACAC------TTAATCTTCTTTGCTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849798 75 - 106955855 TGTAGTCTGTGTCACAactctgaatttattttcttctcagcactgatcatgacttacac------ttaatcttctttgctt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158366 75 + 53671032 TGTAGTCTATGTCACAGCTCTGAAtttattttcttctcagcactgatcatgacttacac------ttaatcttctttgctt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611238 75 + 59248254 TGTAGTCTATGTCACAGCTCTGAAtttattttcttctcagcactgatcatgacttacac------ttaatcttctttgctt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479334 75 - 13342542 TGTAGTCTATGTCACAGCTCTGAAtttattttcttctcagcactgatcatgacttacac------ttaatcttctttgctt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5409828 75 + 7714307 TGTAGTCTATGTCACAGCCCTGAATTTATTTTCTTCTCAGCACTGATCATGACTTACAC------TTAATCTTCTTTGCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217693 75 + 50890351 TGTAGTCTGTGTCACAGCTCTGAAtttattttcttctcagcactgatcatgacttacac------ttaatcttctttgctt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831207 75 - 2385121 TGTAGTCTATGTCACAGccctgaatttattttcttctcagcactgatcatgacttacac------ttaatcttctttgctt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276648 70 + 4274983 TGTAGTCTGTGTCACAGCTCTGAATTTA-----TTCTCAGCACTGATCATGACTTCCAC------TTAATCTTCTTTGCTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28508961 70 + 49145316 TGTAGTC--TGTCACAGCTCTAAATTTATTTTCTTCTCAATACTGATCTTAACTTACAC------TTAA---TCTTTGTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351609 73 + 8899380 TGTAGTC--TGTCATAGCTCTAAATTAATTTTCTTCTCAACACTGATCATGACTTACAC------TTAATCTTCTTTGCTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1564209 73 - 2680843 TGTAGTC--TGTCACAGCTCTAAATTTATTTTCTTCTCAACACTGATCATGACTTACAC------TTAATCTTCTTTGCCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 313239 73 - 4471408 TGTAGTC--TGTCACAGCTCTAAATTTATTTTCTTCTCAACACTGATCATGACTTACAC------TTAATCTTCTTTGCTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5430254 59 + 5549422 TGTAGTCTTTATCAGAGCTCTGAGtttattttctccttagtgctgatcatgacctatat---------------------- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4566172 66 - 122678785 --------TTGTCACAactctgagtt-atttttttcctaacgctgattgtgaccagcat------gtaatcttctttgctt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 272825 75 + 643850 ------CTTTGTCACAGCTCTCAGTTTATATTCTTCCTAGCACTGATCATGACCTACGCTACACTTAAATCCTCCTTGCTC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3923973 56 - 30143674 I e mm10.chr7 111056839 1039 - 145441459 I a score=947649.000000 s hg38.chr19_GL383574v1_alt 26305 71 + 155864 ATTTGCATATGTGTTTATTGTCTGTCTTCACCTTCCCCTTCACCTCCAGACTCTGAGCTCCTGGTATGAAA s panTro5.chr19 36085127 71 + 61309027 ATTTGCATATGTGTTTATTGTCTGTCTTCACCTTCCCCCTCACCTCCAGACTCTGAGCTCCTGGTATGAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837121 71 + 64411610 atttgcatatgtgtttattgtctgtcttcaccttccccctcacctccagactctgagctccTGGTATGAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254882 71 - 8369475 ATTTGCATATGTGTTTATTGTCTGTCTTCACCTTCCCCCTCACTTCCAGACTCTGAGCTCCTGGTATGAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849873 71 - 106955855 atttgcatatgtgtttattgtctgtcttcaccttccccctcacctccagactctgagctcctgggatgaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158441 71 + 53671032 atttgcctatgtgtttattgtctgtcttcacgttccccctcacctccagactctgagctcctgggatgaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611313 71 + 59248254 atttgcctatgtgtttattgtctgtcttcacgttccccctcacctccagactctgagctcctgggatgaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479409 71 - 13342542 atttgcctatgtgtttattgtctgtcttcacgttccccctcacctccagactctgagctcctgggatgaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5409903 71 + 7714307 GTTTGCCTATGTGTTTATTGTCTGTCTTCACGTTCCCCCTCACCTCCAGACTCTGAGCTCCTGGGATGAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217768 71 + 50890351 atttgcatatgtgtttattgtctgtcttcacgttccccctcacctccagactctgagctcctgggaggaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831282 71 - 2385121 atttgcctatgtgtttattgtctgtcttcacgttccccctcacctccagactctgagctcctggaatgaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276718 71 + 4274983 ATTTGCGTATGTGTTTATTGTCTGTCTTCCCATTCCCCCTCACCTCCAGACTCTGAGCTCCTGGGATGAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28509031 71 + 49145316 ATTTGCATATGTGTTTATTGTTTGTCTTCACCCTCCCCCTCACCTCCAGACTCTGAGCTCCTAGGAGAAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351682 71 + 8899380 ATTTGCATATGTGTTTATTGTTTGTCTTCACCCTCCCGCTCACCTCTAGACTCTGAGCTCCTGGGATGAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1564282 71 - 2680843 ATTTGCATATGTGTTTATTGTTTGTCTTCACCCTCCCCCTCACCTCCAACCTCTGAGCTCCTGGGATGAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 313312 69 - 4471408 ATTTGCATATGTGTTTATCGTTTGTCTTCACCCTCCCTCTCACCTCTAGACTC--AGCTCCTGGGACGAAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3924029 71 - 30143674 ATTTACACATGTGTTTATTGGCCATCTTCACCTTCCCTCTCACTTCCTGAGTCTGAGTTCCTGGAATGAAA i micMur3.chr22 I 56 I 333 s otoGar3.GL873654 5430313 71 + 5549422 attcacatatgtgtttattgtctatcttcacccTCCCTCTCACTTCCGGAGTCTGAGCTGCTGGAATGAAA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4566238 61 - 122678785 atttgc--atgtgtttattg-------tcaccttccctcccccccatagagtctgagctcctggaagaat- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 272900 64 + 643850 CTTTG----TATTTTTATTGTCTGTCTTCAC--TTCCTCTCCCCACTCTACCCACAGCTCCTGGG-TGAAC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e mm10.chr7 111056839 1039 - 145441459 I a score=152770.000000 s hg38.chr19_GL383574v1_alt 26376 12 + 155864 GGTTGTTTAGTT s panTro5.chr19 36085198 12 + 61309027 GGTTGTTTAGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837192 12 + 64411610 GGTTGTTTAGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254953 12 - 8369475 GGTTGTTTAGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849944 12 - 106955855 ggatgtttAGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158512 12 + 53671032 ggatgtttAGTT i rheMac8.chr19 C 0 I 4 s macFas5.chr19 34611384 12 + 59248254 ggatgtttAGTT i macFas5.chr19 C 0 I 4 s macNem1.NW_012011689v1 4479480 12 - 13342542 ggatgtttAGTT i macNem1.NW_012011689v1 C 0 I 4 s cerAty1.NW_012005268v1 5409974 12 + 7714307 GGATGTTTAGTT i cerAty1.NW_012005268v1 C 0 I 4 s chlSab2.chr6 29217839 12 + 50890351 ggatgtttAGTT i chlSab2.chr6 C 0 I 4 s manLeu1.NW_012102454v1 831353 12 - 2385121 ggatgtttAGTT i manLeu1.NW_012102454v1 C 0 I 4 s colAng1.NW_012111697v1 2276789 12 + 4274983 GGATGTTTAGTT i colAng1.NW_012111697v1 C 0 I 4 s calJac3.chr22 28509102 12 + 49145316 GGATGTTTAGGT i calJac3.chr22 C 0 I 4 s saiBol1.JH378197 5351753 12 + 8899380 GGATGTTTAGTT i saiBol1.JH378197 C 0 I 4 s cebCap1.NW_016107633v1 1564353 12 - 2680843 GGATGTTTAGTT i cebCap1.NW_016107633v1 C 0 I 4 s aotNan1.NW_018505377v1 313381 12 - 4471408 GGATGTTTAGTT i aotNan1.NW_018505377v1 C 0 I 4 s otoGar3.GL873654 5430384 12 + 5549422 GAATGTTTATTC i otoGar3.GL873654 C 0 I 4 s canFam3.chr1 4566299 12 - 122678785 gaatgtttattt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 272964 12 + 643850 TGATATTTACTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e micMur3.chr22 3924100 333 - 30143674 I e mm10.chr7 111056839 1039 - 145441459 I a score=447221.000000 s hg38.chr19_GL383574v1_alt 26388 32 + 155864 ----AGTGAGTAAATGGAAATGATTTAGCAT-TTTAG s panTro5.chr19 36085210 32 + 61309027 ----AGTGAGTAAATGGAAATGATTTAGCAT-TTTAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837204 32 + 64411610 ----AGTGAGTAAATGGAAATGATTTAGCAT-TTTAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254965 32 - 8369475 ----AGTGAGTAAATGGAAATGATTTAGCAT-TTTAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849956 32 - 106955855 ----AGTGAGTAAATGGAAATGATTTAGCAT-TTTAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158528 32 + 53671032 ----AGTGAGTAAATGGAAATGATTTAGCAT-TTTAG i rheMac8.chr19 I 4 C 0 s macFas5.chr19 34611400 32 + 59248254 ----AGTGAGTAAATGGAAATGATTTAGCAT-TTTAG i macFas5.chr19 I 4 C 0 s macNem1.NW_012011689v1 4479496 31 - 13342542 ----AGTGAGTAAATGGAAATGATTTAGC-T-TTTAG i macNem1.NW_012011689v1 I 4 C 0 s cerAty1.NW_012005268v1 5409990 32 + 7714307 ----AGTGAGTAAATGGAAATGATTTAGCAT-TTTAG i cerAty1.NW_012005268v1 I 4 C 0 s chlSab2.chr6 29217855 32 + 50890351 ----AGTGAGTAAATGGAAATGATTTAGCAT-TTTAG i chlSab2.chr6 I 4 C 0 s manLeu1.NW_012102454v1 831369 32 - 2385121 ----AGTGAGTAAATGGAAATGATTTAGCAT-TTTAG i manLeu1.NW_012102454v1 I 4 C 0 s colAng1.NW_012111697v1 2276805 22 + 4274983 ----A----------GGAAATGATTTAGCAT-TTTAG i colAng1.NW_012111697v1 I 4 C 0 s calJac3.chr22 28509118 32 + 49145316 ----AGTGAGTATATAAAAATGATTTAGCAT-TTCAG i calJac3.chr22 I 4 I 601 s saiBol1.JH378197 5351769 32 + 8899380 ----AGTGAGTAGATGGAAATGATTTAGCAT-TTCAG i saiBol1.JH378197 I 4 C 0 s cebCap1.NW_016107633v1 1564369 32 - 2680843 ----AGTGAATAGATGGAAATGATTTAGCAT-TTCAG i cebCap1.NW_016107633v1 I 4 I 318 s aotNan1.NW_018505377v1 313397 32 - 4471408 ----AGTGAGTAGATGGAAATGATTTAGCAT-TTCAG i aotNan1.NW_018505377v1 I 4 C 0 s micMur3.chr22 3924433 32 - 30143674 ----AGTGAATAAATGGAAATAATTTAGCAT-TTTAG i micMur3.chr22 I 333 C 0 s otoGar3.GL873654 5430400 33 + 5549422 ----AGTGAATAAATGGAAATTATTTAGCATGTTTAG i otoGar3.GL873654 I 4 C 0 s canFam3.chr1 4566311 32 - 122678785 ----AATAAATAGGTGGACATGATTTAACAT-TTTAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 272976 36 + 643850 AATGAGTGCATAAATGAAAATGATTCTGCAT-TTCTG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e mm10.chr7 111056839 1039 - 145441459 I a score=117117.000000 s hg38.chr19_GL383574v1_alt 26420 8 + 155864 CTTATTGT s panTro5.chr19 36085242 8 + 61309027 CTTATTGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837236 8 + 64411610 CTTATTGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6254997 8 - 8369475 CTTATTGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849988 8 - 106955855 CTTATTGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158560 8 + 53671032 CTTATTGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611432 8 + 59248254 CTTATTGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479527 8 - 13342542 CTTATTGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5410022 8 + 7714307 CTTATTGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217887 8 + 50890351 CTTATTGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831401 8 - 2385121 CTTATTGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276827 8 + 4274983 CTTATTGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28509751 8 + 49145316 cTTATTGT i calJac3.chr22 I 601 C 0 s saiBol1.JH378197 5351801 8 + 8899380 CTTATTGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1564719 8 - 2680843 cTTATTGT i cebCap1.NW_016107633v1 I 318 C 0 s aotNan1.NW_018505377v1 313429 8 - 4471408 CTTATTGT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3924465 8 - 30143674 CTTATTAA i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5430433 8 + 5549422 CTTATTAA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4566343 8 - 122678785 TTTATTAA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 273012 8 + 643850 CTTATTAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 517777 3211 + 2501019 T e mm10.chr7 111056839 1039 - 145441459 I a score=35123.000000 s hg38.chr19_GL383574v1_alt 26428 2 + 155864 TC s panTro5.chr19 36085250 2 + 61309027 TC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837244 2 + 64411610 TC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6255005 2 - 8369475 TC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849996 2 - 106955855 TC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158568 2 + 53671032 TC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611440 2 + 59248254 TC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479535 2 - 13342542 TC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5410030 2 + 7714307 TC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217895 2 + 50890351 TC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831409 2 - 2385121 TC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276835 2 + 4274983 TC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28509759 2 + 49145316 TT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5351809 2 + 8899380 TC i saiBol1.JH378197 C 0 I 316 s cebCap1.NW_016107633v1 1564727 2 - 2680843 TT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 313437 2 - 4471408 TC i aotNan1.NW_018505377v1 C 0 I 319 s micMur3.chr22 3924473 2 - 30143674 TC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 514566 2 + 2501019 TC i proCoq1.NW_012149263v1 T 3211 C 0 s otoGar3.GL873654 5430441 2 + 5549422 TC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4566351 2 - 122678785 TC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 273020 2 + 643850 TC i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111056839 1039 - 145441459 I a score=1299406.000000 s hg38.chr19_GL383574v1_alt 26430 96 + 155864 TTGTAGAAGTATC---TTGGGTAT----ACCTCCAAATAATGCTTTTCCATGTTCACAATTGCATTTCCCTATAAAA--------TTAAATTAT----------------CC---------------------------------------------------------------------------TG---------CCTCACATT-AAGA s panTro5.chr19 36085252 96 + 61309027 TTGTAGAAGTATC---TTGGGTAT----ACCTCCAAATAATGCTTTTCCATGTTCACAATTGCATTTCCCTATAAAA--------TTAAATTAT----------------CC---------------------------------------------------------------------------TG---------CCTCACATT-AAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837246 96 + 64411610 TTGTAGAAGTATC---TTGGGTAT----ACCTCCAAATAATGCTTTTCCATGTTCACAATTGCATTTCCCTATAAAA--------TTAAATTAT----------------GC---------------------------------------------------------------------------TG---------CCTCACATT-AAGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6255007 96 - 8369475 TTGTAGAAGTATC---TTGGGTAT----ACCTCCAAATAGTGCTTTTCCATGTTCACAATTGCATTTCCCTATAAAA--------TTAAATTAT----------------CC---------------------------------------------------------------------------TC---------CCTCACATT-AAGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63849998 96 - 106955855 TTGTAGAAGTATC---TTGGGTAT----ACCTCCAAATAATGCTTTTCCATGTTCACAATTGCATTTCCCTATAAAA--------TTAAATTAT----------------CC---------------------------------------------------------------------------TC---------CCTCACATT-AAGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158570 97 + 53671032 TTGTAGAAGTGTC---TTGGGGAT----ACCTCCAAATAATGCTTTTCCATGTTAACAATTGCATTTCCCTATAAAA--------TTAAAATAT----------------CC---------------------------------------------------------------------------TC---------CCTCACATTAAAGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611442 97 + 59248254 TTGTAGAAGTGTC---TTGGGGAT----ACCTCCAAATAATGCTTTTCCATGTTAACAATTGCATTTCCCTATAAAA--------TTAAAATAT----------------CC---------------------------------------------------------------------------TC---------CCTCACATTAAAGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479537 97 - 13342542 TTGTAGAAGTGTC---TTGGGGAT----ACCTCCAAATAATGCTTTTCCATGTTAACAATTGCATTTCCCTATAAAA--------TTAAAATAT----------------CC---------------------------------------------------------------------------TC---------CCTCACATTAAAGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5410032 97 + 7714307 TTGTAGAAGTGTC---TTGGGGAT----GCCTCCAAATAATGCTTTTTTATGTTAACAATTGCATTTCCCTATAAAA--------TTAAAATAT----------------CC---------------------------------------------------------------------------TC---------CCTCACATTAAAGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217897 97 + 50890351 TTGTAGAAGTGTC---TTAGAGAT----AACTCCAAATAATGCTTTTCCATGTTAACAATTGCATTTCCCTATAAAA--------TTAAAATAT----------------CC---------------------------------------------------------------------------TC---------CCTCACATTAAAGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831411 97 - 2385121 TTGTAGAAGTGTC---TTGGGGAT----GCCTCCAAATAATGCTTTTCTATGTTAACAATTGCATTTCCCTATAAAA--------TTAAAATAT----------------CC---------------------------------------------------------------------------TC---------CCTCACATTAAAGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276837 97 + 4274983 TTGTAGAAGTGTC---TTGGGGAT----GCCTCCAAATAATGCTTTTCCATGTTAACAGTTGCATTTCCCTATAAAA--------GTAAAATAG----------------CC---------------------------------------------------------------------------TC---------CCTCACATTAAAGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28509761 96 + 49145316 TTGTAGAAATATC---TTGGGGAT----ACCTCCAAATAATGCTTTTCCATGTTCACAATTGCATTTCCCTATAAAA--------TTAAAATAT----------------CT---------------------------------------------------------------------------CC---------CCTCACATT-AAGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5352127 96 + 8899380 TTGTAGAAATATC---TTGGGGAT----ACCTCCAAATAATGCTTTTCCATGTTCACAATTGCATTTCCCTATAAAA--------TTAAAATAT----------------CT---------------------------------------------------------------------------CC---------CCTCACATT-AAGA i saiBol1.JH378197 I 316 C 0 s cebCap1.NW_016107633v1 1564729 96 - 2680843 TTGTAGAAATATC---TTGGGGAT----ACCGCCAAATAATGCTTTTCCATGTTCACAATTGCATTTCCCTATAAAA--------TTAAAATAT----------------CT---------------------------------------------------------------------------CC---------CCTTACATT-AAGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 313758 96 - 4471408 TTGTAGAAATATC---TTGGGGAT----ACCTCCAAATAATGCTTTTCCATGTTCACAATTGCATTTCCCTATAAAA--------TTAAAATAT----------------CT---------------------------------------------------------------------------TT---------CCTCACATT-AAGA i aotNan1.NW_018505377v1 I 319 C 0 s micMur3.chr22 3924475 93 - 30143674 TTGTAGAAGTCTC---TTGGGGAT----ACCTCCAAATAATGCTTTACTATGTTCACAATTGTATTTCCATTTAAAA--------TTAAAGTTA----------------CC---------------------------------------------------------------------------CC---------CCCCAT----AAGA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 514568 92 + 2501019 TTGTAGAAGTCTC---TTGGGGAT----ACCTCCAAATAATGCTTTTCCATGTTCACACTTGTATTTCCCTTTAAAA--------TTAAAATT-----------------CC---------------------------------------------------------------------------CC---------CCTCAT----AAGA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5430443 103 + 5549422 TTACAGAAGTCTCTAGTTGGAGAT----ACCTCCAAATAATGCTTTTCTGTGTTCACAATTATATTTCCC-TTAAAA--------TTGAAGTC-----------------CC---------------------------------------------------------------------------CCCCTACCCCACCCAGT----GAGA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4566353 174 - 122678785 TTGTAGAAATCTC---TTGAGGGTGGGAATCTCCAAATAATACTTT-CCATATTCACAATCGTATATCTCTTTAATA--------TTGAAATGC----------------CTAAAggcccctgggtggctcaatcagttaagcatctgccttctgctcaggtcatcatctcagggtcctgggattgagc---------ccctatatc-aagc i canFam3.chr1 C 0 I 79 s dasNov3.JH563638 273022 119 + 643850 TTATAGTAGTCTC---TTGGAAGT----ATCTCCAAATAATGCTTT-CCATGTTCACAATTGTATTTCTCTTTAAAATAAAATACTTAAAACATATTGCCTTCCTCTCCCAC---------------------------------------------------------------------------CC---------CCTAACTGT-AAGA i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111056839 1039 - 145441459 I a score=3451248.000000 s hg38.chr19_GL383574v1_alt 26526 239 + 155864 AATCTTGAAGAA---------------------------------TTT---C-----------A-GTGAG------TAGGGATGCAAGAGGATGAAATCTAGTGACATAATTAACATTATTGGGGAGGTAAACT----------CTTTGTGACTCAAGCTCAATTATAATTTTCATTT-AAAGTTTAAAGGAAGCCTCCATTCAGGGTGTAGGAAGAAATTACACAGTGGTGACATGTATGAATATTTTATGGAATAGTTCCAGT------------TGTGTTTGCACCTACGTCTATAAGTGAGTAGGATGCCT------------------------------------------------------------------------A s panTro5.chr19 36085348 239 + 61309027 AATCTTGAAGAA---------------------------------TTT---C-----------A-GTGAG------TAGGGATGCAAGAGGATGAAATCTAGTGACATAATTAACATTATTGGGGAGGTAAACT----------CTTTGTGACTCAAGCTCAATTATAATTTTCATTT-AAAGTTTAAAGGAAGCCTCCATTCAGGGTGTAGGAAGAAATTACACAGTGGTGACATGTATGAATATTTTATGGAATAGTTCCAGT------------TGTGTTTGCACCTACGTCTATAAGTGAGTAGGATGCCT------------------------------------------------------------------------A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837342 239 + 64411610 AATCTTGAAGAA---------------------------------TTT---C-----------A-GTGAG------TAGGGATGCAAGAGGATGAAATCTAGTGACATAATTAACATTATTGGGGAGGTAAACT----------CTTTGTGACTCAAGCTCAATTATAATTTTCATTT-AAAGTTTAAAGGAAGCCTCCATTCAGGGTGTAGGAAGAAATTACACAGTGGTGACATGTATGAATATTTTATGGAATAGTTCCAGT------------TGTGTTTGCACCTACGTCTATAAGTGAGTAGGATGCCT------------------------------------------------------------------------A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6255103 237 - 8369475 AATCTTGAAGAA---------------------------------TTT-----------------GTGAG------TAGGGATGCAAGAGGATGAAATCTAGTGACATAATTAACATTATTGGGGAGGTAAACT----------CTTTGTGACTCAAGCTCAATTATAATTTTCATTT-AAAGTTTAAAGGAAGCCTCCATTCAGAGTGTAGGAAGAAATTACACAGTGGTGACATGTATGAATATTTTATGGAATAGTTCCAGT------------TGTGTTTGCACCTACGTCTATAAGTGAGTAGGATGCCT------------------------------------------------------------------------A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63850094 239 - 106955855 AATCTTGAAGAA---------------------------------TTT---C-----------A-GTGAG------TAGGGATGCAAGAAGATGAAATCTAGTGACATAATGAACATTATTGGGGAGGTAAACT----------CTTTGTGACTCAAGCTCAATTATAATTTTCATTT-AAAGTTTAAAGGAAGCCTCCATTCAGGATGTAGGAGGAAATTACACAGTGGTGACATGTATGAATATTTTATGGAATAGTTCCAGT------------TGTGTTTGCACCTATGTCTATAAGTGAGTAGGATGCCT------------------------------------------------------------------------A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158667 239 + 53671032 AATCTTGAAGAA---------------------------------TTT---C-----------A-GTGAG------TAGGGATACAAGAGGATGAAATCTAGTGACATAATTAACATTATTGGGGAGGTAAACT----------CTTTCTGACTCAAGCTCAATTATAATTTTCATTT-AAAGTTTAAAGGAAGCCTCCATTCAGGATGTAGGAGGAAATTACACAGTGGTGACATGTATGAATGTTTTATGGAATAGTTACAGT------------TGTGTTTGCACCTGTGTCTGTAAGTGAATAGGATGCCT------------------------------------------------------------------------A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611539 239 + 59248254 AATCTTGAAGAA---------------------------------TTT---C-----------A-GTGAG------TAGGGATACAAGAGGATGAAATCTAGTGACATAATTAACATTATTGGGGAGGTAAACT----------CTTTCTGACTCAAGCTCAATTATAATTTTCATTT-AAAGTTTAAAGGAAGCCTCCATTCAGGATGTAGGAGGAAATTACACAGTGGTGACATGTATGAATGTTTTATGGAATAGTTACAGT------------TGTGTTTGCACCTGTGTCTGTAAGTGAATAGGATGCCT------------------------------------------------------------------------A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479634 239 - 13342542 AATCTTGAAGAA---------------------------------TTT---C-----------A-GTGAG------TAGGGATACAAGAGGATGAAATCTAGTGACATAATTAACATTATTGGGGAGGTAAACT----------CTTTCTGACTCAAGCTCAATTATAATTTTCATTT-AAAGTTTAAAGGAAGCCTCCATTCAGGATGTAGGAGGAAATTACACAGTGGTGACATGTATGAATGTTTTATGGAATAGTTACAGT------------TGTGTTTGCACCTGTGTCTGTAAGTGAATAGGATGCCT------------------------------------------------------------------------A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5410129 239 + 7714307 AATCTTGAAGAA---------------------------------TTT---C-----------A-ATGAG------TAGGGATACAAGAGGATGAAATCTAGTGACATAATTAACATTATTGGGGAGGTAAACT----------CTTTCTGACTCAAGCTCAATTATAATTTTCATTT-AAAGTTTAAAGGAAGCCTCCATTCAGGATGTAGGAGGAAATTACACAGTGGTGACATGTATGAATGTTTTATGGAATAGTTACAGT------------TGTGTTTGCACCTGTGTCTGTAAGTGAATAGGATGCCT------------------------------------------------------------------------A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29217994 239 + 50890351 AATCTTGAAGAA---------------------------------TTT---C-----------A-ATGAG------TAGGGATACAAGAGGATGAAATCTAGTGACATAATTAACATTATTGGGGAGGTAAACT----------CTTTCTGACTCAAGCTCAATTATAATTTTCATTT-AAAGTTTAAAGGAAGCCTCCATTCAGGATGTAGGAGGAAATTACACAGTGGTGACATGTATGAATGTTTTATGGAATAGTTCCAGT------------TGTGTTTGCACCTGTGTCTGTAATTGAATAGGATGCCT------------------------------------------------------------------------A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831508 203 - 2385121 AATCTTGAAGAA---------------------------------TTT---C-----------A-ATGAG------TAGGGATACAAGAGGATGAAATCTAGTGACATAATTAACATTATTGGGGAGGTAAACT----------CT-------------------------------------TTTAAAGGAAGCCTCCATTCAGGATGTAGGAGGAAATTACACAGTGGTGACATGTATGAATGTTTTATGGAATAGTTACAGT------------TGTGTTTGCACCTGTGTCTGTAAGTGAATAGGATGCCT------------------------------------------------------------------------A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2276934 239 + 4274983 AATCTTGAAGAA---------------------------------TTT---C-----------A-ATGAG------TAGGGATCCAAGAGGATGAAATCTAGTGACATAATTAACATTATTGGGGAGGTAAACT----------CTTTCTGACTCAAGCTCAATTATAATTTTCATTT-AAAGTTTAAAGGAAGCCTCCATTCAGGATGTAGGAGGAAATTACACAGTGGTGACATGTATGAATGTTTTATGGAATAGTTCCAGT------------TGTGTTTGCACCTGTGTCTGTAAGTGAATAGGATGCCT------------------------------------------------------------------------A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28509857 244 + 49145316 AATCTTGAAGAA---------------------------------TTT---T-----------C-GTGAG------TAGGGATGCAAGAGGATGAAATCTAATGACATAATTAACATTATTGGGGAGGTAAACT------CTCACTTTGTGACTCAAGCTCAATTATAATTTTCACTTAAAAGTTTAAAGGAAGCATCTGTTCAGGATGTAGGAAGAAATTATACAGTGGTGACATGTATGAATGGTTTATGGAATAGTTCCAGT------------TGTGTTTGCACCTGTGTCTATAAGTGAATAGGCTGCCT------------------------------------------------------------------------A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5352223 239 + 8899380 AATCTTGAAGAA---------------------------------TTT---C-----------G-GTGAA------TAGGGATGCAAGAGGATGAAATCTAATGACATAATTAACATTATTGGTGAGGTAAACT----------CTTTGTGACTCAAGCTCAATTATAATTTTCACTT-AAAGTTTAAAGGAAGCATCTGTTCAGGATGTAGGAGGAAATTATACAGTGGTGACATGTATGAATGGTTTATGGAATAGTTCCAGT------------TGTGTTTGCACCTGTGTCTGTAAGTGAATAGGCTGCCT------------------------------------------------------------------------A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1564825 243 - 2680843 AATCTTAAAGAA---------------------------------TTT---C-----------A-GTGAG------TAGGGATGCAAGAGGATGAAACCTAATGACATAATTGACATTATTGGTGAGGTAAACT------CTTACTTTGTGACTCAAGCTCAATTATAATTTTCACTT-AAAGTTTAAAGGAAGCATCTGTTCAGGATGTAGGTGGAAATTATACAGTGGTGACATGTATGAATGGTTTATGGAATAGTTCCAGT------------TGTGTTTGCACCTGTGTCTGTAAGTGAATAGGCTGCCT------------------------------------------------------------------------A i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 313854 243 - 4471408 AATCTTGAAGAA---------------------------------TGT---C-----------A-GTGAG------TAGGGATGCAAGGGGATGAAATATAATGACATAAATAACATTATTGGGGAGGTAAACT------CTTACTTTGTGACTCAAGCTCAATTATAATTTTCACTT-AAAGTTTAAAAGAAGCATCTGTTCAGGATGGAGGAGGAAATTATACAGTGGTGACATGTATGAATGGTTTATGGAATAGTCCCAGT------------TGTGTTTGCACCTGTGTCTGTAAGTGAATAGGCTGCCT------------------------------------------------------------------------A i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3924568 213 - 30143674 AATTTTGAAGAA---------------------------------TTT---C----------------AG------TAGGGATGCAAGAGGATGAAATCTAATAACAAAATTGACATTATTGGGGAGATAATCT------TTTACTTTGTGACTCAAGCTCAATTATAATTTTCATTT-AAAGTTTA--------------------------AGGAAATTATAAAATGATGACATGTATGAATAGTTTGTAGAATAGTTCCAGT------------TATGTTTGCACCTCTGTCTGTGTGTGAATATGATGCCT------------------------------------------------------------------------A i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 514660 243 + 2501019 AATTTTGAAGAA---------------------------------TTT---C-----------A-GTGAG------TAGGGATGCAAGAGGATGAACTCTAATAACAAAACTGACATTATTGGGGAGGTAATCT------TTTACTTTGTGACTCAAGCTCAATTATAATTTTCATTG-AAAGTTTAAGAGAAGAATCAGTTCAGGATGTAGGAGGAAATTATAAAATGGTGACATGTATGAATAGTTTGTAGAATAGTTCCAAT------------TATATTTGCACCTCTGTCTGTATGTGAATATGATACCT------------------------------------------------------------------------A i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5430546 233 + 5549422 AGTTTTGAAGAA---------------------------------TTT---C-----------A-GTGAG------TAGGGATGCAAGAGGATGAA--CTAATAAA-----TAGCATTATTGGGGAGATAAACT------TTTACCTTGTGAGTCAAGAACAATT---ATTTTTATTT-AAAGTTTAAAGGAAGAATCAGGTCAGGATATAGGAGGAAATTGTAAAGTGGTGACACATGTGAATAGTTTGTAGAGTAGTTCCAGT------------AATGTTTGCACCAGCGTCTGCAAGTGAATCTGATGCCT------------------------------------------------------------------------A i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111057878 215 - 145441459 AGTGTTGGTGAA---------------------------------TTTATTC-----------T-ATGAG------TGGGTATGTAAAAGTA-GTAGTTTTATAACAAAATAGACATTATTAGGAAGGTAAACT------CTTACTCTGTGACTTAAG-----------TTTTCACTT-A----------GAAGAATGAGATTCGGATAT----TAAAATTATAAGTAAGGGATGGGCACAAA---TTTGTGGAATAGTTCTGGT-------------ATGTTTGCACTT-TACATATGGATGAATGCATTTAAT------------------------------------------------------------------------A i mm10.chr7 I 1039 C 0 s canFam3.chr1 4566606 372 - 122678785 aatctttaaaaaCACTGAAATGCCTAAGACATGTTGCCTCCCCCCTTC---CCCGCCCCCAATA-GTGAGAGATTTTAGGAATACAAGAGGATAAAATCTTATGACAAAATTGGCATTGTTAGGGAGATGGGGTTTTTTTTTTACCTTATGACTCAAGCTCAATTATAATTTTCTTTT-AAAATTTAAGGGAAGAATTGGTTCAAGATTTTTGAGGGAATGGCAAAGCAGTGGCATGCATGAATAGTTTGTAGAATATTTCCACTTACTG-------TATATTTACACCTGTGTCT----GTGAATATGATGCCTGAGCACATACTAGATCCTGGATACCAAGATTGCCCACACTATTTTTACATTATTTTTTAGACTATTTAAATAA i canFam3.chr1 I 79 C 0 s dasNov3.JH563638 273141 247 + 643850 GATTTCGGAGAA---------------------------------TTT---G-----------ATTTGAG------TAGAGGCACAAG---ATGACCTCCTGTGACAAAATTGACTTTTTGGGGGAGATAAGTT------TTTACCTAC--ACTCAAACTCAGTT---ATTTTTTTAT-AAAACTTAAGGGAAGAATCAGTTTAGGATATTTGAGGAAATTATA-AGTGGTGGCACTCATGACTAGTTTGTGAAATAGTTCCGATTATAGCCACACCTGTTTTTGTACCTGTGTCTGTATGTGATTGCCAAGCCC------------------------------------------------------------------------A i dasNov3.JH563638 C 0 I 677 a score=522336.000000 s hg38.chr19_GL383574v1_alt 26765 38 + 155864 AATAG-----GCTAAAATGAATGAAATTCTT-ATAAAAAATAAA s panTro5.chr19 36085587 38 + 61309027 AATAG-----GCTAAAATGAATGAAATTCTT-ATAAAAAATAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837581 38 + 64411610 AATAG-----GCTAAAATGAATGAAATTCTT-ATAAAAAATAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6255340 38 - 8369475 AATAG-----GCTAAAATGAATGAAATTCTT-ATAAAAAATAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63850333 38 - 106955855 AATAG-----GCTAAAATGAATGAAATTCTT-ATCAAAAATAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158906 38 + 53671032 AATAG-----GCTAAAATGAATGAAACTCTT-ATCAAAAATAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611778 38 + 59248254 AATAG-----GCTAAAATGAATGAAATTCTT-ATCAAAAATAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479873 38 - 13342542 AATAG-----GCTAAAATGAGTGAAACTCTT-ATCAAAAATAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5410368 38 + 7714307 AATAG-----GCTAAAATGAGTGAAACTCTT-ATCAAAAATAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29218233 38 + 50890351 AATAG-----GCTAAAATGAGTGAAACTCCT-ATCAAAAATAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831711 38 - 2385121 AATAG-----GCTAAAATGAGTGAAACTCTT-ATCAAAAATAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2277173 38 + 4274983 AATAG-----GCTAAAATGAGTGAAACTCTT-ATCAAAAATAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28510101 39 + 49145316 AATAA-----GCTAAAATGAGTGAAATTCTTAACAAAAAATAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5352462 39 + 8899380 AATAG-----GCTAAAATGAGTGAAATTCTTAACAAAAAATAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1565068 39 - 2680843 AATAG-----GCTAAAATGAGTGACATTTTTAACAAAAAATAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 314097 34 - 4471408 AATAG-----GCTAAAATGAGTGAAATTCTT-----AAAATAAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3924781 43 - 30143674 AATAAAATGTGCTCAAATGAATGAAATTCTT-ATCTAAGATAAA i micMur3.chr22 C 0 I 4 s proCoq1.NW_012149263v1 514903 43 + 2501019 AATAAAATGTGCTAAAATGAATGAAATTCTT-ATCTAAGATAAA i proCoq1.NW_012149263v1 C 0 I 4 s otoGar3.GL873654 5430779 43 + 5549422 GATAAAATGCATTAAAATGAAAAAAATTCTC-ATCTAAGATAAA i otoGar3.GL873654 C 0 I 1637 s mm10.chr7 111058093 43 - 145441459 AGTTCCTTGTGCTAAAATGAGAGAAATTCAT-ACATAAATGAAA i mm10.chr7 C 0 I 5 s canFam3.chr1 4566978 38 - 122678785 AATGG-----GCTAAATTGAGTGAAATTCTT-ATTTAATATATA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 274065 34 + 643850 AATGA-----ACTATAATGAGTGAAATTCTG-AAATAATA---- i dasNov3.JH563638 I 677 C 0 a score=57269.000000 s hg38.chr19_GL383574v1_alt 26803 5 + 155864 TTCTT s panTro5.chr19 36085625 5 + 61309027 TTCTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837619 5 + 64411610 TTCTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6255378 5 - 8369475 TTCTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63850371 5 - 106955855 TTCTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158944 5 + 53671032 TTCTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611816 5 + 59248254 TTCTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479911 5 - 13342542 TTCTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5410406 5 + 7714307 TTCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29218271 5 + 50890351 TTCTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831749 5 - 2385121 TTCTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2277211 5 + 4274983 TTCTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28510140 5 + 49145316 TTCTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5352501 5 + 8899380 TTCTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1565107 5 - 2680843 ttctt i cebCap1.NW_016107633v1 C 0 I 1230 s aotNan1.NW_018505377v1 314131 5 - 4471408 TTCTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3924828 5 - 30143674 TTCCT i micMur3.chr22 I 4 C 0 s proCoq1.NW_012149263v1 514950 5 + 2501019 TTCTT i proCoq1.NW_012149263v1 I 4 C 0 s mm10.chr7 111058141 5 - 145441459 TTTGT i mm10.chr7 I 5 C 0 s canFam3.chr1 4567016 2 - 122678785 TT--- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 274099 1 + 643850 -T--- i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5430822 1637 + 5549422 I a score=1282122.000000 s hg38.chr19_GL383574v1_alt 26808 101 + 155864 ACATTTAG-TTAGCT-TACCTGGATAAT----CATTCAAATGGAAACCAGGTTGCTACTGCACTGGGAAAAGAGACTTTAT---GAAGA---ACGATTATATAAGCCACTTGC s panTro5.chr19 36085630 101 + 61309027 ACATTTAG-TTAGCT-TACCTGGATAAT----CATTCAAATGGAAACCAGGTTGCTACTGCACTGGGAAAAGAGACTTTGT---GAAGA---ACGATTATATAAGCCACTTGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837624 101 + 64411610 ACATTTAG-TTAGCT-TACCTGGATAAT----CATTCAAATGGAAACCAGGTTGCTACTGCACTGGGAAAAGAGACTTTGT---GAAGA---ACGATTATATAAGCCACTTGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6255383 101 - 8369475 ACATTTAG-TTAGCT-TACCTGGGTAAT----CATTCAAATGGAAACCAGGTTGCTACTGCACTGGGAAAAGAGACTTTGT---GAAGA---ACGATTATATAAGCCACTTGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63850376 101 - 106955855 ATATTTAG-TTAGCT-TACCTGGATGAT----CGTTCAGATGGAAACCAGGTTGCTACTGCATTGGGAAAAGAGACTTTGT---GAAGA---ACGATTATATAAGCCACTTGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30158949 97 + 53671032 ATATTTAG-TTAGCT-TACCTGGATAA--------TCAAATGAAAACCAGGTTGCTACTGCATTGTGAAAAGAGACTTTGT---GAAGA---ATGATTATATAAGCCACTTGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611821 101 + 59248254 ATATTTAG-TTAGCT-TACCTGGATAAT----CATTCAAATGAAAACCAGGTTGCTACTGCATTGTGAAAAGAGACTTTGT---GAAGA---ATGATTATATAAGCCACTTGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4479916 101 - 13342542 ATATTTAG-TTAGCT-TACCTGGATAAT----CATTCAAATGAAAACCAGGTTGCTACTGCATTGTGAAAAGAGACTTTGT---GAAGA---ATGATTATATAAGCCACTTGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5410411 101 + 7714307 ATATTTAG-TTAGCT-TACCTGGATAAT----CATTCAAATGAAAACCAGGTTGCTACTGCATTGTGAAAAGAGACTTTGT---GAAGA---ATGATTATATAAGCCACTTGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29218276 101 + 50890351 ATATTTAG-TTAGCT-TACCTGGATAAT----CATTCAAATGAAAACCAGGTTGCTACTGCATTGTGAAAAGAGACTTTGT---GAAGA---ATGATTATATAAGCCACTTGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831754 101 - 2385121 ATATTTAG-TTAGCT-TACCTGGATAAT----CATTCAAATGAAAACCAGGTTGCTACTGCATTGTGAAAAGAGACTTTGT---GAAGA---ATGATTATATAAGCCACTTGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2277216 101 + 4274983 ATATTTAG-TTAGCT-TACCTGGATAAT----TATTCAAATGAAAACCAGGTTGCTACTGCATTGTGAAAAGAGACTTTGT---GAAGA---ATGATTATATAAGCCACTTGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28510145 101 + 49145316 ATATTTAG-TTAGCT-TACCTGGATAAT----CATTCAAATGGAAATCAGGTTGCTGTTGCATTGGCAAAAGAGACTTTGT---TGAGC---ACGATTCTATAAGCCACTTGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5352506 101 + 8899380 ATATTTAG-CTAGCT-TACCTGGATAAT----CATTCAAATGGAAATCAGGTTGCTACTGCATTGGCAAAAGAGACTTTGT---TGAGC---ACGATTCTATAAGCCACTTGC i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 314136 101 - 4471408 ATATTTAG-TTAACT-TACCTGGATAAT----CATTCAAATGGAAATCAGGTTGCTACTGCATTGGCAAAAGAGACTTTGT---TGAGC---ACAATTCTATAAGCCACTTGC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3924833 101 - 30143674 ----ATAG-TTAGCTATAGGTGGATAAT----CACTCAAATGGAAACCAGGTTGCTACTGCATTAGGAAAAGAGACTTTTTGAAGAAGA---ATGATTATATAAGCCAGTTGC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 514955 101 + 2501019 ----ATAG-TTAGCTGTACCTGGATAAT----CACTCAAACGGAAACCAGGTTGCTACTGCATTAGGAAAAGAGACTTTGTGAAGAAGA---ATGATTATATAAGCCAGTTGC i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111058146 82 - 145441459 ATGTTTAG-CTAGCT-GTCCTAGAGAAT----CATT-----------CAGGTTGCCATTGCAGAGGGAAAAGA-------T---GGAAA---AAGAATG-GGAAGTTGATAGC i mm10.chr7 C 0 C 0 s canFam3.chr1 4567018 102 - 122678785 ---TTAAG-TTAGCTATACCTGGATAGTACACCACAAAACTGAAAACCAGGTTGCCACTACATTAGGAAAAGATACTTCGT---GAAGA---ATGATTA-ATAAGTCAGCTAC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 274100 110 + 643850 GTATTTAGATTAGCTATATCTGGATAATACATCACTCAAATGGAAACCAGGTTGCCACTGCTTTGGAAAAGGGGACATTGT---GAAGAAATATGAATATAAAAGTCAGCTGC i dasNov3.JH563638 C 0 I 605 e otoGar3.GL873654 5430822 1637 + 5549422 I e cebCap1.NW_016107633v1 1565112 1230 - 2680843 I a score=43759.000000 s hg38.chr19_GL383574v1_alt 26909 3 + 155864 CTT s panTro5.chr19 36085731 3 + 61309027 CTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837725 3 + 64411610 CTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6255484 3 - 8369475 CTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63850477 3 - 106955855 CTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30159046 3 + 53671032 CTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611922 3 + 59248254 CTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4480017 3 - 13342542 CTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5410512 3 + 7714307 CTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29218377 3 + 50890351 CTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831855 3 - 2385121 CTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2277317 3 + 4274983 CTT i colAng1.NW_012111697v1 C 0 I 318 s calJac3.chr22 28510246 3 + 49145316 CTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5352607 3 + 8899380 CTT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 314237 3 - 4471408 CTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3924934 3 - 30143674 CTT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 515056 3 + 2501019 CTT i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111058228 3 - 145441459 TTT i mm10.chr7 C 0 C 0 s canFam3.chr1 4567120 3 - 122678785 TTT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 274210 605 + 643850 I e otoGar3.GL873654 5430822 1637 + 5549422 I e cebCap1.NW_016107633v1 1565112 1230 - 2680843 I a score=102783.000000 s hg38.chr19_GL383574v1_alt 26912 9 + 155864 TAAAATAAG s panTro5.chr19 36085734 9 + 61309027 TAAAATAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837728 9 + 64411610 TAAAATAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6255487 9 - 8369475 TAAAATAAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63850480 8 - 106955855 TAAAATAA- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30159049 9 + 53671032 TAAAATAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611925 9 + 59248254 TAAAATAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4480020 9 - 13342542 TAAAATAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5410515 9 + 7714307 TAAAATAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29218380 9 + 50890351 TAAAATAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831858 9 - 2385121 TAAAATAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2277638 9 + 4274983 taaaataaG i colAng1.NW_012111697v1 I 318 C 0 s calJac3.chr22 28510249 9 + 49145316 TAAAATAAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5352610 9 + 8899380 TAAAGTCAG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 314240 9 - 4471408 TAAAATAAG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3924937 9 - 30143674 TAAAATGAT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 515059 9 + 2501019 TAAAATGAT i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111058231 8 - 145441459 -TAAATGAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4567123 9 - 122678785 TAAAACAAT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 274210 605 + 643850 I e otoGar3.GL873654 5430822 1637 + 5549422 I e cebCap1.NW_016107633v1 1565112 1230 - 2680843 I a score=1382887.000000 s hg38.chr19_GL383574v1_alt 26921 115 + 155864 TTGTTC----TTAAAA-TCAAGAGATTGGTGGAAGAATAGAAAAACAAGTAAATTGTTAACAGA---TTTCTTTAATCATCTGCTAAGTCTGGCTCATTGGCATAATTTATCTACTTCTTGAT s panTro5.chr19 36085743 115 + 61309027 TTGTTC----TTAAAA-TCAAGAGATTGGTGGAAGAATAGAAGAACAAGTAAATTGTTAACAGA---TTTCTTTAATTATCTGCTAAGTCTGGCTCATTGGCATAATTTATCTATTTCTTGAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837737 111 + 64411610 TTGTTC----TTAAAA-TCAAGAGATTGGTGGAAGAATAGAAGAACAAGTAAATTGTTAACAGA-------TTTAATTATCTGCTAAGTCTGGCTCATTGGCATAATTTATCTATTTCTTGAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6255496 115 - 8369475 TTGTTC----TTAAAA-TCAAGAGATTGGTGGAAGAATAGAAAAACAAGTAAATTGTTAACAGA---TTTCTTTAATCATCTGCTAAGTCTGGCTCATTGGCATAATTTATCTACTTCTTGAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63850488 113 - 106955855 --GTTC----TTAAAA-TCAAGAGATTGGTGGAAGGATATAAGAACAAGTAAATTGTTAACAGA---TTTCTTTAATCATCTGGTAAGTCTGGCTCATTGGCATAATTTATCTACTTCTTGAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30159058 115 + 53671032 TTGTCC----TTAAAA-TCAAGAGATTAGTGGAAGGATATAAGAACAAGTAAATTGTTAACAGA---TTTCTTTAATCATCTGCTAAGTCTGGCTCACTGGCATAATTTATCTACTTTTTGAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34611934 115 + 59248254 TTGTCC----TTAAAA-TCAAGAGATTAGTGGAAGGATATAAGAACAAGTAAATTGTTAACAGA---TTTCTTTAATCATCTGCTAAGTCTGGCTCACTGGCATAATTTATCTACTTTTTGAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4480029 115 - 13342542 TTGTCC----TTAAAA-TCAAGAGATTAGTGGAAGGATATAAGAACAAGTAAATTGTTAACAGA---TTTCTTTAATCATCTGCTAAGTCTGGCTCACTGGCATAATTTATCTACTTTTTGAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5410524 115 + 7714307 TTGTCC----TTAAAA-TCAAGAGATTAGTGGAAGGATATAAGAACAAGTAAATTGTTAACAGA---TTTCTTTAATCATCTGCTAAGTCTGGCTCACTGGCATAATTTATCTACTTTTTGAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29218389 115 + 50890351 TTGTTC----TTAAAA-TCAAGAGATTAGTGGAAGGATATAAGAACAAGTAAATTGTTAACAGA---TTTCTTTAATCATCTGCTAAGTCTGGCTCACTGGCATAATTTATCTACTTTTTGAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831867 115 - 2385121 TTGTCC----TTAAAA-TCAAGAGATTAGTGGAAGGATATAAGAACAAGTAAATTGTTAACAGA---TTTCTTTAATCATCTGCTAAGTCTGGCTCACTGGCATAATTTATCTACTTTTTGAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2277647 113 + 4274983 TTGTTC----TTAAAA-TCAAGAGATTGGTGGAAGGATATAAGAACAAGTAAATTGTTAACAGA---TTTCTTTAATCATCTGCTAAGTCTGGCTCAT--GCATAATTTATCTACTTCTTGAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28510258 115 + 49145316 TTATTC----TTAATA-TCAAGAGATTGGTGGAAGGATATAAGACCAAGGAAATTGTTAACAGA---TTTCTTTAATCATCTGCTAAGTCTGCCCCTTTGGCATAATTTATCTACTTATTGAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5352619 115 + 8899380 TTATTC----TTAAAA-TCAAGAGATTGGTGGAAGGATATAAGAACAAGTAAATTGTTAACAGA---TTTCTTTACTCATCTGCTAAGTATGCCCCATTGGCATAATTTATCTACTTACTGAT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 314249 112 - 4471408 TTA-------TTAAAA-TCAAGAGATTGGCGGAAGGATATAAGAACAAGTAAATTGTTAACAGA---TTTCTTTAATCGTCTGCTAAGTCTGCCCCATTGGCATAGTTTATCTATTTATTGAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3924946 119 - 30143674 CTGTCCTCAATTAAAA-TCAAGGGATCGG---AAGAATATAAAGGCAGGTAAATTGTTAATAGATTATTTCTTTAATCATCTGCCAAGTCTTGCCCTTTGGCATAATTTATCTACTTCTTGAT i micMur3.chr22 C 0 I 5 s proCoq1.NW_012149263v1 515068 109 + 2501019 CTGTCCTCAATTAAAA-TCAAGGGATTGG-------------TGGGAGGTAAATTATTAATAGATTATTTCTTTAATCATTTGCTAAGTCTTGCCCATTGGCATAATTTATCCACTTCTTGAT i proCoq1.NW_012149263v1 C 0 I 25 s mm10.chr7 111058239 104 - 145441459 TTGCCC----TTAAACTTCAGGGAATTTGTGTCAG-ATACAAAAGT-GGTAAACTGTTAAAAGA---GTCTT----TCATCTG------CTTGTCAACTGGGTTAGCTTATCCTCCTGGTAGT i mm10.chr7 C 0 I 2 s canFam3.chr1 4567132 112 - 122678785 TTGTCC----TTAAAA-TCAAGGCGTTGGTAGAGGAATATAAAGTCTGGTAATGGATTTAT------TTACTTAAATCATCTGCTAAGCCCTGCCCATTGGTATACCTTAGCCACTTCTTGAT i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 274815 117 + 643850 tTGCCC----TTAAAA-TTAAGGGTTTGGTAAAAGAGTATAAAAGCAGGTAAATTGTTAGTAAATTGTTTCTTTAATCATTTGCTGAATCTTGCCCATTGCCATATTTCACCCACTCACTGA- i dasNov3.JH563638 I 605 C 0 e otoGar3.GL873654 5430822 1637 + 5549422 I e cebCap1.NW_016107633v1 1565112 1230 - 2680843 I a score=281214.000000 s hg38.chr19_GL383574v1_alt 27036 25 + 155864 GTTAGTCACATAGTCATAAACTATT s panTro5.chr19 36085858 25 + 61309027 GTTAGTCACATAGTCATAAACTATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837848 25 + 64411610 GTTAGTCACATAGTCATAAACTATT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6255611 25 - 8369475 GTTAGTCACATAGTCATAAACTATT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63850601 25 - 106955855 GTTAGTCACATAGTCATAAACTATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30159173 25 + 53671032 GTTAGTCACGTAGTCATAAACTGTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34612049 25 + 59248254 GTTAGTCACGTAGTCATAAACTGTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4480144 25 - 13342542 GTTAGTCACGTAGTCATAAACTGTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5410639 25 + 7714307 GTTAGTCACGTAGTCATAAACTGTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29218504 25 + 50890351 GTTAGTCACGTAGTCATAAACTGTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 831982 25 - 2385121 GTTAGTCACGTAGTCATAAACTGTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2277760 25 + 4274983 GTTAGTCACATAGTCATAAACTGTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28510373 25 + 49145316 GTTAGTCACATAGTCGTAAACTATG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5352734 25 + 8899380 GTTAGTCACACAGTCATAAACTATG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 314361 25 - 4471408 GTTAGTCACACAGTCATAAACTATG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3925070 25 - 30143674 ATTAGCCTCATAGTCATAAACTATG i micMur3.chr22 I 5 C 0 s mm10.chr7 111058345 25 - 145441459 ATTTGTCCCATAGTCATAAACCACT i mm10.chr7 I 2 C 0 s canFam3.chr1 4567245 19 - 122678785 GTTAAT----TAGCCATATACTC-- i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 274932 21 + 643850 ----ACCACATAATTATAAACTATA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515177 25 + 2501019 I e otoGar3.GL873654 5430822 1637 + 5549422 I e cebCap1.NW_016107633v1 1565112 1230 - 2680843 I a score=1852285.000000 s hg38.chr19_GL383574v1_alt 27061 151 + 155864 ACCTTATTGGAGAGAGTGGAAGAGCTTTGTG--TGATGGATAAAATACTTGCGGGG-TGCTTTATT----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATTAC------TTGGGGATCTAAATCTAGCAATTCACAAAATTACTATCTAAAATGAC-AAAGATCTAGTGAAACTTCAAGCCA s panTro5.chr19 36085883 151 + 61309027 ACCTTATTGGAGAGAGTGGAAGAGCTTTGTG--TGATGGATAAAATACTTGTGGGG-TGCTTTATT----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATTAC------TTGGGGATCTAAATCTAGCAATTCACAAAATTACTATCTAAAATGAC-AAAGATCTAGTGAAACTTCAAGCCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39837873 151 + 64411610 ACCTTATTGGAGAGAGTGGAAGAGCTTTGTG--TGATGGATAAAATACTTGTGGGG-TGCTTTATT----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATTAC------TTGGGGATCTAAATCTAGCAATTCACAAAATTACTATCTAAAATGAC-AAAGATCTAGTGAAACTTCAAGCCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6255636 151 - 8369475 ACCTTATTGGAGAGAGTGGAAGAGCTTTGTG--TGATGGATAAAATACTTGTGGGG-TGCTTTATT----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATTAC------TTGGGGATCTAAATCTAGCAATTCACAAAATTACTATCTAAAATGAC-AAAGATCTAGTGAAACTTCAAGCCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63850626 151 - 106955855 ACCTTATTGGAGAGAGTGGAAGAGCTTTGTG--TGATGGATAAAATACTTGTGGGG-TGCTTTATT----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATTAC------TTGGGGATCTAAATCTAGCAATTCACAAAATTACTACCTAAAATGAC-AAAGATCTAGTGAAACTTCAAGCAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30159198 151 + 53671032 ACCTTATTGAAGAGAGTGGAAGAACTCTGTGGTGGATGGATAAAATACCTGTGGGGCTGCTTTA-T----------------------------------------------TGATTC-------------------------------------------------------------CTTGCATTA-------TTGGGGATCTAAATGTAGCAA-TCAC-AAATTACTACCTAAAATGACAAAAGATCTAGTGAAACTTCAAGCCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34612074 150 + 59248254 ACCTTATTGAAGAGAGTGGAAGAACTCTGTG--TGATGGATAAAATACCTGTGGGG-TGCTTTATT----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATTA-------TTGGGGATCTAAATGTAGCAATTCACAAAATTACTACCTAAAATGAC-AAAGATCTAGTGAAACTTCAAGCCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4480169 150 - 13342542 ACCTTATTGAAGAGAGTGGAAGAACTCTGTG--TGATGGATAAAATACCTGTGGGG-TGCTTTATT----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATTA-------TTGGGGATCTAAATGTAGCAATTCACAAAATTACTACCTAAAATGAC-AAAGATCTAGTGAAACTTCAAGCCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5410664 150 + 7714307 ACCTTATTGAAGAGAGTGGGAGAACTCTGTG--TGATGGATAAAATACCTGTGGGG-TGCTTTATT----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATTA-------TTGGGGATCTAAATGTAGCAATTCACAAAATTACTACCTAAAATGAC-AAAGATCTAGTGAAACTTCAAGCCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29218529 150 + 50890351 ACCTTATTGAAGAGAGTGGAAGAACTCTGTG--TGATGGATAAAATACCTGTGGGG-TGCTTTATT----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATTA-------TTGGGGATCTAAATGTAGCAATTCACAAAATTACTACCTAAAATGAC-AAAGATCTAGTGAAACTTCAAGCCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 832007 150 - 2385121 ACCTTATTGAAGAGAGTGGAAGAACTCTGTG--TGATGGATAAAATACCTGTGGGG-TGCTTTATT----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATTA-------TTGGGGATCTAAATGTAGCAATTCACAAAATTACTACCTAAAATGAC-AAAGATCTAGTGAAACTTCAAGCCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2277785 150 + 4274983 ACCTTATTGGAGAGAGTGGAAGAGCTTTGTG--TGATGGATAAAATACCTGTGGGG-TGCTTTATT----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATTA-------TTGGGGATCTAAATCTAGCAATTCACAAAATTACTACCTAAAATGAC-AAAGATCTAGTGAAACTTCAAGCCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28510398 151 + 49145316 ACCTTATTGGAGAGCATGGAAGAGCTTTGTG--TGATGGATAAAATACCTGTGGGG-TGCTTTATT----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATTAC------TTGGGGATCTAAATCTAGCAGTTCACAAAATCACTACGTAGAATGAC-AAAGATCTAGTGAAACTTCAAACCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5352759 151 + 8899380 ACCTTATTGGAGAGCATGGAAGAGCTTTGTG--TGATAGATAAAATACCTGTGGGG-TGCTTTATT----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATTAC------TTGGGGATCTAAATCTAGCAGTTCACAAAATCACTACCTACAATGAC-AAAGATCTAGTGAAACTTCAAGCCC i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 314386 151 - 4471408 ACCTTATTGGAGAGCATGGAAGAGCTTTGTG--TGATGGATAAAATACCTGTGGGG-TGCTTTATT----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATTAC------TTGGGGATCTAAATCTAGCAGTTCACAAAATCACCACCTAGAATGAC-AAAGAGCTAGTGAAACTTCAAGCCA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3925095 145 - 30143674 ATCTTATTGGAAAGAGTGGAAGAGCTTTGAA--TGATGGATAAAATATCT--GAGG-TGC-----T----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATGAC------TTGAGGATCTAAATCTAGCAACTCACAAAGTCACTGCCTAGATTGACAAAAGATCTAGAGAAAATTCAAGCCA i micMur3.chr22 C 0 I 1000 s proCoq1.NW_012149263v1 515202 148 + 2501019 ATCTTACTGGAAAGAGTGGAAGACCTTTGAA--TGATGGGTAAAATATCT--GAGG-TGCTTGA-T----------------------------------------------TGATTT-------------------------------------------------------------CTTGCATGAC------TTGAAGATCGAAACCTAGCAATTCACAAAATCACTGCCTAGATTGAC-AAAGATCTAGAGAAAATTCAAGCCA i proCoq1.NW_012149263v1 I 25 C 0 s mm10.chr7 111058370 246 - 145441459 GTCCCAGTGGTGTGATCAGGAAAGC-----A--TCA-----AAAGTTCCTGCGAGG-TATTTTACTGACCtttgagactgggtctttttctgtgaggctggcttcaagttcatgatatctactttcctctgcctcactggtgctgagataaaggcatgcactgccatgcttggcATCAACTTGCATAA--------TGGGAATCTAAATCTAATAACTCACAAAATTGCTACCTCAAACAGC-AAAGATCTCATGAAATTTAAAGCCT i mm10.chr7 C 0 C 0 s canFam3.chr1 4567264 146 - 122678785 ----------AGTGAGTAGGAGAGCATTGTA--GGATGGATGAAATATCTGTGAAG-TGTTTTA-T----------------------------------------------TGATTT-------------------------------------------------------------CTTGTGTTCTCACGAGTTGGGGACCTAAATCTAGCAATTCACAAAATCACTAACTAGAATGTC-AAAGATCCAGTAACACTTTAAGCTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 274953 144 + 643850 GCCCCAATGGGGAGGGTGGGAGAGCTTTGTG--TGATGGATAAAATTCCTGTGAAA-TGCTTTATT--------------------------------------------------TT-------------------------------------------------------------ATTGTGTGAT------TTG--GATCTAGATCTAGCAATTCACAAAATCACTGCCTAGAGT-TC-AAAGACATAGTGTAATTTCAAGCCA i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5430822 1637 + 5549422 I e cebCap1.NW_016107633v1 1565112 1230 - 2680843 I a score=65454.000000 s hg38.chr19_GL383574v1_alt 27212 6 + 155864 CAGTTT s panTro5.chr19 36086034 6 + 61309027 CAGTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838024 6 + 64411610 CAGTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6255787 6 - 8369475 CAGTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63850777 6 - 106955855 CAGTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30159349 6 + 53671032 TGGTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34612224 6 + 59248254 TGGTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4480319 6 - 13342542 TGGTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5410814 6 + 7714307 TGATTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29218679 6 + 50890351 TGGTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 832157 6 - 2385121 TGATTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2277935 6 + 4274983 TGGTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28510549 6 + 49145316 CAGTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5352910 6 + 8899380 CAGTTT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 314537 6 - 4471408 CAGTTT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 515350 6 + 2501019 CAGTTT i proCoq1.NW_012149263v1 C 0 I 6911 s mm10.chr7 111058616 6 - 145441459 AGATTT i mm10.chr7 C 0 C 0 s canFam3.chr1 4567410 6 - 122678785 CAGTTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 275097 6 + 643850 CAGTTT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3925240 1000 - 30143674 I e otoGar3.GL873654 5430822 1637 + 5549422 I e cebCap1.NW_016107633v1 1565112 1230 - 2680843 I a score=1328581.000000 s hg38.chr19_GL383574v1_alt 27218 119 + 155864 CTTTTTGTTGCCCTATT-TAGTGATGTTGCCAG-TACTTGGAGCCTTGGAAACAGTT-------TATTATTGTTACATAGTCCGCAGAAATAC-TTGGTAATTCTGGGAGTCTGAAGT------------CAGGTGCCAGA s panTro5.chr19 36086040 119 + 61309027 CTTTTTGTTGCCCTATT-TAGTGATGTTGCCAG-TACTTGGAGCCTTGGAAACAGTT-------TATTATTGTTACATAGTCCACAGAAATAC-TTGGTAATTCTGGGAGTCTGAAGT------------CAGGTGCCAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838030 119 + 64411610 CTTTTTGTTGCCCTATT-TAGTGATGTTGCCAG-TACTTGGAGCCTTGGAAACAGTT-------TATTATTGTTACATAGTCCACAGAAATAC-TTGGTAATTCTGGGAGTCTGAAGT------------CAGGTGCCAGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6255793 119 - 8369475 CTTTTTGTTGCCCTATT-TAGTGATGTTGCCAG-TACTTGGAGCCTTGGAAACAGTT-------TATTATTGTTACATAGTCCACAGAAATAC-TTGGTAATTCTGGGAGTCTGAAGT------------CAGGTGCCAGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63850783 119 - 106955855 CTTTTTGTTGCCCTATT-TAGTGATGTTGCCAG-TACTTGGAGCCTTGGAAACAGTT-------TATTATTGTTACATAGTCCACAGAAATAC-TTGGTAATTCTGGGAGTCTGAAGT------------CAGGTGCCAGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30159355 120 + 53671032 CTTTTTGTTGCCCTATT-TAGTGATGTTGCCAGAAACTTGGAACCTTGG-AACAGTT-------TATTATTGTTACATTGTCCACAGAAATACTTTGGTAATTCTGGGAGTCCGAAGT------------CAGGTGTCAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34612230 119 + 59248254 CTTTTTGTTGCCCTATT-TAGTGATGTTGCCAG-AACTTGGAACCTTGGAAACAGTT-------TATTATTGTTACATTGTCCACAGAAATAC-TTGGTAATTCTGGGAGTCTGAAGT------------CAGGTGTCAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4480325 119 - 13342542 CTTTTTGTTGCCCTATT-TAGTGATGTTGCCAG-AACTTGGAACCTTGGAAACAGTT-------TATTATTGTTACATTGTCCACAGAAATAC-TTGGTAATTCTGGGAGTCTGAAGT------------CAGGTGTCAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5410820 119 + 7714307 CTTTTTGTTGCCCTATT-TAGTGATGTTGCCAG-AACTTGGAACCTTGGAAACAGTT-------TATTATTGTTATATTGTCCACAGAAATAC-TTGGTAATTCTGGGAGTCTGAAGT------------CAGGTGTCAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29218685 119 + 50890351 CTTTTTGTTGCCCTATT-TAGTGATGTTGCCAG-AACTTGGAACCTTGGAAACAGTT-------TATTATTGTTACATTGTCCACAGAAATAC-TTGGTAATTCTGGGAGTCTGAAGT------------CAGGTGTCAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 832163 119 - 2385121 CTTTTTGTTGCCCTATT-TAGTGATGTTGCCAG-AACTTGGAACCTTGGAAAGAGTT-------TATTATTGTTACATTGTCCACAGAAATAC-TTGGTAATTCTGGGAGTCTGAAGT------------CAGGTGTCAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2277941 119 + 4274983 CTTTTTGTTGCCCTATT-TAGTGATGTTGCCAG-AACTTGGAGCCTTGGAAACAGTT-------TATTATTGTTACATTGTCCACAGAAATCC-TTGGTAATTCTGGGAGTCTGAAGT------------CAGGTGTCAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28510555 130 + 49145316 CTTTTTGTTGCCCTATT-TAGTGATGTTGCCAG-AACTTTGAACCTTGGAAACAGTT-------TATTGTTGCTACATAGTCCACAAAAATAC-TTGGTAATTCTGGGAGTCTGAATTGTTCATTTTCAGAAAATGCCA-A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5352916 119 + 8899380 CTTTTTGTTGCCCTTTT-TAGTGATGTTGCCAG-AACTTTGAACCTTGGAAACAGTTT-----ATATTGTTGCTACATAGTCCACAAAAATAC-TTGGTAATTCTGGGAGTCTGAAGT------------CAGGTGCC--A i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 314543 118 - 4471408 CTTTTTGTTGCCCTATT-TAGTGATGTTGCCAG-AACTTTGAACCTTGGAAACAGTT-------TATTGTTGCTACGTAGTCCACAAAAATAC-TTGGTAATTCTGGGAGTCTGAAGT------------GAGGTGCCA-A i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111058622 120 - 145441459 CTTTTGTTTGTCCTATTATAGTGAAGTTGTCTG-AACT--GAGGCTTCAAAGCATTTTTTTTGTTGTTGTTGCTATGTAAGCTACAGAAATAT-GGGGTTCTTCTAAGAGTCTGAACT------------TGGGTG----- i mm10.chr7 C 0 C 0 s canFam3.chr1 4567416 118 - 122678785 CTATTGGTTGCCCTATT-TAGTGAGGTTGCCAG-AACTTGGAGCCTTGGATACAGTT-------CATTGTTGCTATACAGTCCACAGAAATAT-TTAGTAATTTGGGGAGTCTGAAGT------------CA-GTGCCAAA i canFam3.chr1 C 0 I 4 s dasNov3.JH563638 275103 119 + 643850 CTTTTGGTTGTCCTATT-TAGTAAGGTTGCCAG-AATTTGGAGACTTGGAAACAGTT-------TATTGTTGTTGTGTAATCCACAAAAATGC-TCAGTAGTTCTGGGAGTCTAAAGT------------CAGGTGCCAAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e otoGar3.GL873654 5430822 1637 + 5549422 I e cebCap1.NW_016107633v1 1565112 1230 - 2680843 I a score=779248.000000 s hg38.chr19_GL383574v1_alt 27337 72 + 155864 AACTG--TT-CATTTTCTAGTAGGGGTAAGTAAGGTAAGCCATGATTTTCTAAGTCGGAA-GT-AAAG--AAAACAGCA s panTro5.chr19 36086159 72 + 61309027 AACTG--TT-CATTTTCTAGTAGGGGTAAGTAAGGTAAGCCATGATTTTCTAAGTCGGAA-GT-AAAG--AAAACAGCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838149 72 + 64411610 AACTG--TT-CATTTTCTAGTAGGGGTAAGTAAGGTAAGCCATGATTTTCTAAGTCGGAA-GT-AAAG--AAAACAGCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6255912 72 - 8369475 AACTG--TT-CATTTTCTAGTAGGGGTAAGTAAGGTAAGCCATGATTTTCTAAGTCGGAA-GT-AAAG--AAAACAGCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63850902 72 - 106955855 AACTG--TT-TGTTTTCTAGTAGGGGTAAGTAAGGTAAGCCATGATTTTCTAAGTCAGAA-GT-AAAG--AAAACAGCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30159475 73 + 53671032 AACTG--TTCCATTTTCTAGTAGGGGTAAGTAAGGTAAGCCATGAC-TTCTAAGTGGGAG-GTAAGAG--AAAACAGCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34612349 72 + 59248254 AACTG--TT-CATTTTCTAGTAGGGGTAAGTAAGGTAAGCCATGACTTTCTAAGTCGGGA-GT-AGAG--AAAACAGCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4480444 72 - 13342542 AACTG--TT-CATTTTCTAGTAGGGGTAAGTAAGGTAAGCCATGACTTTCTAAGTTGGGA-GT-AGAG--AAAACAGCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5410939 72 + 7714307 AACTG--TT-CATTTTCTAGTAGGGGTAAGTAAGGTAAGCCATGACTTTCTAAGTCGGGA-GT-AGAG--AAAACAGCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29218804 72 + 50890351 AACTG--TT-CATTTTCTAGTAGGGGTAAGTAAGGTAAGCCATGACTTTCTAAGTCGGAA-GT-AGAG--AAAACAGCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 832282 72 - 2385121 AACTG--TT-CATTTTCTAGTAGGGGTAAGTAAGGTAAGCCATGACTTTCTAAGTCGGGA-GT-AGAG--AAAACAGCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278060 74 + 4274983 AACTG--TT-CATTTTCTAGTAGGGGTAGGTAAGGTAAGCCATGACTTTCTAAGTCAGGA-GT-AGAGGAAAAACAGCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28510685 69 + 49145316 AACTG--TT-CATTTTCTAGTAGGGGTACATAAAGTAAGCCATGACTTCCTGAGCC---A-GT-AGAG--AAAACAACA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5353035 72 + 8899380 AACTG--TT-CATTTTCTAGTAGGGGTATGTAAGGTAAGCCATGACTTCCTGAGTCAGAA-GT-AGAG--AAAACAACA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 314661 72 - 4471408 AACTG--TT-CATTTTCTAGTAGGGGTACCTAAGGTAAGCCATGACTTCCTGAGTCAGAA-GT-AGAG--AAAACAACA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5432459 62 + 5549422 AAATA--TT-CATTTTCTGGAAG----------AACAAACCATGACTTTCTGAATGAGAA-GT-AGAG--AAAACAACA i otoGar3.GL873654 I 1637 I 9 s mm10.chr7 111058742 67 - 145441459 --CTG--TT----TTTCTTGCAA-GATGGATAAGATGAGCCATGACTTTCTATATGATAATAC-TGAA--AAAACAGTG i mm10.chr7 C 0 C 0 s canFam3.chr1 4567538 65 - 122678785 AACTG-----CATTTTCCAGTGC-----AGTAAGATAAGCTGTAGCTTTCTGAATCAGTA-GT-AGAA--AAAACAGCA i canFam3.chr1 I 4 I 1 s dasNov3.JH563638 275222 70 + 643850 AACTAACTT-CATTTTCCAGT-GTGGTA---AAGATAAACCATGACTTTCTGAACCAGAG-GT-TGAG--AAAACAGCA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e cebCap1.NW_016107633v1 1565112 1230 - 2680843 I a score=376807.000000 s hg38.chr19_GL383574v1_alt 27409 41 + 155864 -TAAAAC-TGAAG--AAAAAAAA-TAGTA----GAAGGAAGGAAGTAGGA s panTro5.chr19 36086231 41 + 61309027 -TAAAAC-TGAAG--AAAAAAAA-TAGTA----GAAGGAAGGAAGTAGGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838221 41 + 64411610 -TAAAAC-TGAAG--AAAAAAAA-TAGTA----GAAGGAAGGAAGTAGGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6255984 41 - 8369475 -TAAAAC-TGAAG--AAAAAAAA-TAGTA----GAAGGAAGGAAGTAGGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63850974 44 - 106955855 -TAAAAC-TGAAG---AAAAAAA-TAGTAgaaggaaggaaggaagtagga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30159548 40 + 53671032 -TAAAAC-TGAAG---AAAAAAA-TAGTA----GAAGGAAGGAGGTAGAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34612421 40 + 59248254 -TAAAAC-TGAAG---AAAAAAA-TAGTA----GAAGGAAGGAGGTAGAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4480516 40 - 13342542 -TAAAAC-TGAAG---AAAAAAA-TAGTA----GAAGGAAGGAGGTAGAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411011 40 + 7714307 -TAAAAC-TGAAG---AAAAAAA-TAGTA----GAAGGAAGGAGGTAGAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29218876 40 + 50890351 -TAAAAC-TGAAG---AAAAAAA-TAGTA----GAAGGAAGGAGGTAGAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 832354 40 - 2385121 -TAAAAC-TGAGG---AAAAAAA-TAGTA----GAAGGAAGGAGGTAGAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278134 41 + 4274983 -TAAAAC-TGAAG--AAAAAAAA-TAGTA----GAAGGAAGGAGGTAGAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28510754 44 + 49145316 -TAAACC-TGAAGGAAAAAAAAATTTGTA----GAAGGAAGGAAATAGGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5353107 43 + 8899380 -TAAACC-TGAAGGAAAAAAAAA-TTGTA----GAAGGAAGGAAATAGGA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 314733 42 - 4471408 -TAAACC-TGaagaaaaaaaaaa-tt-ta----gaaggaaggaaatagga i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111058809 30 - 145441459 -TACACC-AGAAG----AAAATA-GAGGA----GAAAAATG--------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4567604 40 - 122678785 -AAAACC-TGAAG---AAAATAA-TAGTA----GAAGGAAGGAAATAGGA i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 275292 43 + 643850 TTAAACCACAAAG--AAAAAAAA-TAGTA----GGAGGAAGGAAATAGGA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e otoGar3.GL873654 5432521 9 + 5549422 I e cebCap1.NW_016107633v1 1565112 1230 - 2680843 I a score=971754.000000 s hg38.chr19_GL383574v1_alt 27450 78 + 155864 AGAAAAAAGAAATCTTATCTGTGCATGATAC------ATAGCAGGAGTTTT---GTATTTAACTCAGTGCCACAGTAATAATAGCAG s panTro5.chr19 36086272 78 + 61309027 AGAAAAAAGAAATCTTATCTGTGCATGATAC------ATAGTAGGAGTTTT---GTATTTAACTCAGTGCCACAGTAATAATAGCAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838262 78 + 64411610 AGAAAAAAGAAATCTTATCTGTGCATGATAC------ATAGTAGGAGTTTT---GTATTTAACTCAGTGCCACAGTAATAATAGCAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256025 78 - 8369475 AGAAAAAAGAAATCTTATCTGTGCATGATAC------ATAGCAGGAGTTTT---GTATTTAACTCAGTGCCACAGTAATAATAGCAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851018 78 - 106955855 agaaaAAAGAAATCTTATCTGTGTATGATAC------ATAGCAGGAGTTTT---GTATTTAACTCAGTGCCACAGTAATAATAGCAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30159588 78 + 53671032 AGAAAAAAGAAATCTTATCTGTGCATGATAC------ATAGCAAGAGTTTT---GTATTTAACTCAGTGCCACAGTAATAATAGCAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34612461 78 + 59248254 AGAAAAAAGAAATCTTATCTGTGCATGATAC------ATAGCAAGAGTTTT---GTATTTAACTCAGTGCCACAGTAATAATAGCAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4480556 78 - 13342542 AGAAAAAAGAAATCTTATCTGTGCATGATAC------ATAGCAAGAGTTTT---GTATTTAACTCAGTGCCACAGTAATAATAGCAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411051 78 + 7714307 AGAAAAAAGAAATCTTATCTGTGCATGATAC------ATAGCAAGAGTTTT---GTATTTAACTCAGTGCCACAGTAATAATAGCAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29218916 78 + 50890351 AGAAAAAAGAAATCTTATCTGTGCATGATAC------ATAGCAAGAGTTTT---GTATTTAACTCAGTGCCACAGTAATAATAGCAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 832394 78 - 2385121 AGAAAAAAGAAATCTTATCTGTGCATGATAC------ATAGCAAGAGTTTT---GTATTTAACTCAGTGCCACAGTAATAATAGCAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278175 78 + 4274983 AGAAAAAAGAAATCTTATCTGTGCATGATAC------ATAGCAAGAGTTTT---GTATTTAACTCAGTGCTACAGTAATAATAGCAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28510798 78 + 49145316 AGAAAAAAGAAATCTTATCTGTGCAGGATAC------ATAGCAAGAGTTTT---CTATTTAACTCAGTGCCACAATAATGGTAGCAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5353150 78 + 8899380 AGAAAAAAGAAATCTTATCAGTGCAGGATAC------ATAGCAAGAGTTTT---GTATTTAACTCAGTGCCACAATAATGGTAGCAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1566342 78 - 2680843 AGAAAAAAGAAATCTTATCTGTGCAGGATAC------ACAGCAAGAGTTTG---GTATTTAACTCAGTGCCACAATAATGGCAGCAA i cebCap1.NW_016107633v1 I 1230 C 0 s aotNan1.NW_018505377v1 314775 72 - 4471408 agaaaaaagaaa------CTGTGCAGGATAC------ATAGCAAGAGTTTT---GTATTTAACTCAGTGCCACAATATTGGTAGCAA i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111058839 73 - 145441459 AGAGCAAAGAAACATTATTGACCCAGTA---------ACAGCAAGAGCT-----GTATTTAATTCAGTGCTGCAATAATAACAGCAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4567644 84 - 122678785 AGAGCAAAGAAATCTTATCTGTGCTTGACATATAGCAATAGCAAGAGTTTTATAGTATTTAACCCAGTGCCAAAGTAATAGCGG--- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 275335 74 + 643850 AGGGTAAAGAAATCTTA----TGCATGACAC------ACAACAAGGGTTTT---TTGTTTAACACAGTGTCAAAACAATAATAGCAG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e otoGar3.GL873654 5432521 9 + 5549422 I a score=1452184.000000 s hg38.chr19_GL383574v1_alt 27528 143 + 155864 TAACTACAGATAGTTTAACTTGAATTTAATTATTCCGTGCTAGAAGATGCTTGC-T----ATAGA------------------------AACAATTTGTC------TTTCTCTCATGATGCTATAAAATAATATATTAATTAGCTGTTTTA--AAAACTAGA-------------TACCATTGAAGT------AAAttt s panTro5.chr19 36086350 144 + 61309027 TAACTACAGATAGTTTAACTTGAATTTAATTACTCCGTGCTAGAAGATGCTTGCAA----AAAGA------------------------AACAGTTTGTC------TTTCTCTCATGATGCTATAAAATAATATATTAATTAGCTGTTTTA--AAAACTAGG-------------TACCATTGAAGT------AAAttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838340 144 + 64411610 TAACTACAGATAGTTTAACTTGAATTTAATTACTCCGTGCTAGAAGATGCTTGCAA----AAAGA------------------------AACAGTTTGTC------TTTCTCTCATGATGCTATAAAATAATATATTAATTAGCTGTTTTA--AAAACTAGG-------------TACCATTGAAGT------AAAttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256103 143 - 8369475 TAACTACAGATAGTTTAACTTGAATTTAATTACTCCGTGCTAGAAGATGCTTGC-T----ATAGA------------------------AACAATTTGTC------TTTCTCTCATGATGCTATAAAATAATATATTAATTAGCTGTTTTA--AAAACTAGA-------------TACCATTGAAGT------AAAttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851096 137 - 106955855 TAACTACAGATAGTTTAACTTGAATTTAATTACTCCATGCTAGAAGATGCTTGC-T----ATAGA------------------------AACAATTTGTC------TTTCTGTCATGATGCT-----ATAATATATTAATTAGCTGTTTTA--AAAACTAGA-------------TGTCATTGAAGT------AAAtt- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30159666 135 + 53671032 TAACTACAGATAGTTTAACTTGAATTTAATTACTCCATGCTAGAAGATGCTTGC-T----ATAGA------------------------AACAATTTGCC------TTTCTCTCATGATGCT--------GTATATTAATTAGCTGTTTTA--AAAACTGGA-------------TATCACTGAAGT------AAAttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34612539 135 + 59248254 TAACTACAGATAGTTTAACTTGAATTTAATTACTCCATGCTAGAAGATGCTTGC-T----ATAGA------------------------AACAATTTGCC------TTTCTCTCATGATGCT--------GTATATTAATTAGCTGTTTTA--AAAACTGGA-------------TATCACTGAAGT------AAAttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4480634 135 - 13342542 TAACTACAGATAGTTTAACTTGAATTTAATTACTCCATGCTAGAAGATGCTTGC-T----ATAGA------------------------AACAATTTGCC------TTTCTCTCATGATGCT--------GTATATTAATTAGCTGTTTTA--AAAACTGGA-------------TATCACTGAAGT------AAAttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411129 135 + 7714307 TAACTACAGATAGTTTAACTTGAATTTAATTACTCCATGCTAGAAGATGCTTGC-T----ATAGA------------------------AACAATTTGCC------TTTCTCTCATGATGCT--------GTATATTAATTAGCTGTTTTA--AAAACTGGA-------------TATCACTGAAGT------AAAttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29218994 135 + 50890351 TAACTACAGATAGTTTAACTTGAATTTAATTACTCCATGCTAGAAGATGCTTGC-T----ATAGA------------------------AACAATTTGCC------TTTCTCTCATGATGCT--------GTATATTAATTAGCTGTTTTA--AAAACCAGA-------------TATCACTGAAGT------CAAttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 832472 135 - 2385121 TAACTACAGATAGTTTAACTTGAATTTAATTACTCCATGCTAGAAGATGCTTGC-T----GTAGA------------------------AACAATTTGCC------TTTCTCTCATGATGCT--------GTATATTAATTAGCTGTTTTA--AAAACTGGA-------------TATCACTGAAGT------AAAttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278253 135 + 4274983 TAACTGCAGATAGTTTAACTTGAATTTAATTACTCCATGCTAGAAGATGCTTGC-T----ATAGA------------------------AACAATTTGCC------TTTCTCTCATGATGCT--------GTATATTAATTAGCTGTTTTT--AAAACTGGA-------------TATCACTGAAGT------AAAttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28510876 146 + 49145316 TAACTGCATATAGTTTAACTTGAATTTAATTACTCCATGCTAGAAGATGTTTGC-TATAGATAGA------------------------AACAATTTGCC------TTTCTCTCAGGGTGCTATAAAGTAATATATTAATTAGTTGTTTTT--CAAA-TGGA-------------TATCATTGAAGT------AAAttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5353228 146 + 8899380 TAACTGCATATAGTTTAGCTTGAATTTAATTACTCCATGCTAGAAGATGCTTGA-TATAGATAGA------------------------AACAATTTGCC------TTTCTCTCAGGATGCTGTAAAGTAATGTATTAATTAGCTGTTTTT--AAAA-TGGA-------------TATCATTGAAGT------AAAttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1566420 146 - 2680843 TAACTGCATATAATTTAACTTGAATTTAATTACTCCATGCTAGAAGATGCTTGC-TATAGATAGA------------------------AACAATTTGCC------TTTCTCTCAGGATGCTATAAAGTAATGAATTAATTAGCTGTTTTT--AAAA-TGGA-------------TATCATTGAAGT------AAAttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 314847 146 - 4471408 TAACTGCATATAGTTTAACTTGAATTTAATTACTCCATGCTAGAAGATGCTTGC-TATAGATAGA------------------------AACAATTTGCC------TTTCTCTCAGGATGCTATAAAGTAATATATTAATTAGCCGTTTTT--AAAA-TGGA-------------TATAATTGAAGT------AAAttt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5432530 167 + 5549422 TAACTGCAGATAGTTTAACTTGAATTTAATTACTTTCCGCTAGAGGATGCTCTT-T----GCTGA------------------------AACTGTTCACCTTTA-TTTTCTCTCATGAAGCTACCAGGTAACGCATTAATTAACCATTGAA--AAAACTGTATCTGTATTATTATTATTATTATTGTGTGGTGGGGttt i otoGar3.GL873654 I 9 C 0 s mm10.chr7 111058912 116 - 145441459 TAAGTACAGGTAGTTTAACTTGAATTTAATT-CTCC-------------------T----CCAGG------------------------AACACTTTGCCCTTA-TTTTCTTTCATAATGCTATAGAGTAATACTTAAGCTA-----TTTT--GAAACATGA-------------TCATATTAAC-------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4567728 171 - 122678785 TAACTGCAGATGGCTTAACTTGAGTTT-ATTGGTCCATGGTAGAAGATGCCCTC-T----ACAGAACATTTTACCAAAAAAAATAAAAGAACATTTTACCTTTT-ATTTTTTCTATGATGCTTTAAATTCTTAAGAAGAATTCTTCTTCag--agagacacg-------------tagcatgtgggg------gagggg i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 275409 139 + 643850 TAACTGCAGATTA------------TTAATTATTTCATGGTAAAGAATGCCCTC-T----ACAGG------------------------AATAATTTGCCTTTTGTTTTCTTTTATGGTGCTTTAAAGGAATACTTTAACCAATACTTTAACTAAAACTGAA-------------TTTTATTGAAAT------AAATCT i dasNov3.JH563638 C 0 I 563 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I a score=795678.000000 s hg38.chr19_GL383574v1_alt 27671 79 + 155864 tgttgttgttgttttgagacaagagtctca------ctctgttgcccagg--ctggagtgcagtggcacgatcac----------agccttgacctc s panTro5.chr19 36086494 79 + 61309027 tgttgttgttgttttgagacaagagtctca------ctctgttgcccagg--ctggagtgcagtggcacgatcac----------agcctggacctc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838484 79 + 64411610 tgttgttgttgttttgagacaagagtctca------ctctgttgcccagg--ctggagtgcagtggcacgatcac----------agcctggacctc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256246 79 - 8369475 tgttgttgttgttttgagacaagagtctca------ctctgttgcccagg--ctggagtgcagtggcacgatcac----------agccttgacctc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851233 87 - 106955855 --ttgttgttgttttgagacaagagtctca------ctctgtcgcccagg--ctggagtgcagtggcacgatcacagctcactgtagccttgacctc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30159801 89 + 53671032 tgttgttgttgttttgagacaagagtctca------ctctgtcgcccagg--ctggcgtgcagtggcacaatcacagctcactgtagtcttgacctc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34612674 89 + 59248254 tgttgttgttgttttgagacaagagtctca------ctctgtcgcccagg--ctggcgtgcagtggcacaatcacagctcactgtagtcttgacctc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4480769 89 - 13342542 tgttgttgttgttttgagacaagagtctca------ctctgtcgcccagg--ctggcgtgcagtggcacaatcacagctcactgtagtcttgacctc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411264 89 + 7714307 tgttgttgttgttttgagacaagagtctca------ctctgtcgcccagg--ctggcatgcagtggcacaatcacagctcactgtagtcttgacctc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219129 89 + 50890351 tgttgttgttgttttgagacaagagtctca------ctctgtcgcccagg--ctggcgtgcagtggcacaatcacagctcactgtagtcttgacctc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 832607 84 - 2385121 tgttgttg-----ttgagacaagagtctca------ctctgtcgcccagg--ctggcatgcagtggcacaatcacagctcactgtagtcttgacctc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278388 86 + 4274983 tgttgttg---ttttgagacaagagcctca------ctctgtcgcccagg--ctggagtgcagtggcacaatcacagcccactgtagtcttgacctc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28511022 84 + 49145316 tgttgttg---ttttgaaac--gagtcttc------ctctgtcgcccagg--ctggagtgtagtggcatgatcacagctcactacagccttgacctc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5353374 86 + 8899380 tgttgttg---ttttgaaacaagagtctcc------ctctgtcgcccagg--ctggagtgtagtggcatgatcacagctcactgcagccttgacctc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1566566 86 - 2680843 tgttgttg---tgttgaaacaagagtctcc------ctctgtcgcccagg--ctggagtgtagtggcatgatcacagctcactgcagccttgacctc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 314993 86 - 4471408 tcttgttg---ttttgaaacaagagtctcc------ctctgtcgcccagg--ctggagtgtagtggcatgatcacagctcactgcagcctttacctc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5432697 84 + 5549422 ttttgtttgt-ttttgagac-agagtctca------ctttatcacctttg--gtagagagctgtggc---atcacagctcacagcaacctccaactc i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4567899 87 - 122678785 tgagggagaagggtagaga-gagaatcttaaactggctctacatccctagaactggatcacag-ggctcaatctcacaaccctgtg--------atc i canFam3.chr1 C 0 I 112 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 275548 563 + 643850 I e mm10.chr7 111059028 0 - 145441459 C a score=880604.000000 s hg38.chr19_GL383574v1_alt 27750 84 + 155864 cctgggctcaggtaatcctcctgcctcagcctcccaagtagctgggaccacaggcacacaccaccacacccagctaattttctg- s panTro5.chr19 36086573 84 + 61309027 tctgggctcaggtaatcctcctgcctcagcctcccaagtagctgggaccacaggcacacaccaccacacccagctaattttctg- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838563 85 + 64411610 tctgggctcaggtaatcctcctgcctcagcctcccaagtagctgggaccacaggcacacaccaccacacccagctaattttctgt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256325 84 - 8369475 cctgggctcaggtaatcctcctgcctcagcctcccaagtaggtgggaccacaggcacacaccaccacacccagctaattttctg- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851320 82 - 106955855 cttgggctcaggtaatcctcctgcctcagcctcccaagtagctgggactacaagcacacaccaccacacccagctaattt--gg- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30159890 84 + 53671032 cctgggctcaggtaatcctcccgcctcagcctcccaagtagttgggactacaggcacacaccaccacacccagctaattttcta- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34612763 84 + 59248254 cctgggctcaggtaatcctcccgcctcagcctcccaagtagttgggactacaggcacacaccaccacacccagctaattttcta- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4480858 84 - 13342542 cctgggctcaggtaatcctcctgcctcagcctcccaagtagttgggactacaggcacacaccaccacacccagctaattttcta- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411353 84 + 7714307 cctgggctcaggtaatcctcccgcctcagcctcccaagtagttgggactacaggcacacaccaccacacccagctaattttcta- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219218 84 + 50890351 cctgggctcaggtaatcctcccgcctcagcctcccaagtagttgggactacaggcacacaccaccacacccagctaattttcta- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 832691 84 - 2385121 cctgggctcaggtaatcctcccgcctcagcctcccaagtagttgggactacaggcacacaccaccacacccagctaattttcta- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278474 84 + 4274983 cctgggctcaggtaatcctcccgcctcagcctcccaagtagttgggactacaggcacacaccaccacacccagctaattttctg- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28511106 85 + 49145316 cctgagctcgggaacacctcccgcctcagcatcccaggtagctgggactacaggtacacaccactgcactcagctaattttatat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5353460 84 + 8899380 cctgagctcagtaacacctcccgcctcagcatcctaagtagctgggactacaggcacacaccaccacgcccagctaattttata- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1566652 84 - 2680843 cctgagctcaggaacacctcctgcctcagcatcccaagtagctgggactacaggcacacaccaccacacccagctaattttata- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 315079 84 - 4471408 cctgagctcaggaacacctcccgcctcagcatcccaagtagctgggactacaggcacacaccaccacacccagctaattttata- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5432781 82 + 5549422 cc-aggcttcgccaattctcctgcctcaggctcccaagtagctgggactacaggcccctgccacaaggctgggct-atattttg- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 275548 563 + 643850 I e mm10.chr7 111059028 0 - 145441459 C e canFam3.chr1 4567986 112 - 122678785 I a score=870310.000000 s hg38.chr19_GL383574v1_alt 27834 85 + 155864 tt----ttttgtagat-acagggttttgccatg--------------------------------------ctgcccaggtcggtctctaactcctggg-------------------------c----tcaagtgat--------ctgcctgc----cttggcctccc s panTro5.chr19 36086657 85 + 61309027 tt----ttttgtagat-acagggttttgccatg--------------------------------------ctgcccaggtcggtctctaactcctggg-------------------------c----tcaagtgat--------ctgcctgc----cttggcctccc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838648 85 + 64411610 tt----ttttgtagat-acagggttttgccatg--------------------------------------ctgcccaggtcggtctctaactcctggg-------------------------c----tcaagtgat--------ctgcctgc----cttggcctccc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256409 85 - 8369475 tt----ttttgtagat-acagggttttgccatg--------------------------------------ctgcccaggtcggtctctaactcctggg-------------------------c----tcaagtgat--------ctgcctgc----cttggcctccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851402 85 - 106955855 tt----ttttgtagat-acagggttttgccatg--------------------------------------ctgcccaggttggtctctaactcctggg-------------------------c----tcaagtgat--------ctgcctgc----cttggcctccc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30159974 85 + 53671032 tt----tttggtatat-acagagttttgccatg--------------------------------------ttgcccaggtcggtctctaactcctggg-------------------------c----tcaagtgat--------ctgcctgc----ctcggcctccc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34612847 85 + 59248254 tt----tttggtatat-acagagttttgccatg--------------------------------------ttgcccaggtcggtctctaactcctggg-------------------------c----tcaagtgat--------ctgcctgc----ctcggcctccc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4480942 85 - 13342542 tt----tttggtatat-acagagttttgccatg--------------------------------------ttgcccaggtcggtctctaactcctggg-------------------------c----tcaagtgat--------ctgcctgc----ctcggcctccc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411437 85 + 7714307 tt----tttggtatat-acagagttttgccatg--------------------------------------ttgcccaggtcggtctctaactcctggg-------------------------c----tcaagtgat--------ctgcctgc----ctcggcctccc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219302 85 + 50890351 tt----tttggtagat-acagagtttcgccatg--------------------------------------ttgcccaggtcggtctctaactcctggg-------------------------c----tcaagtgat--------ctgcctgc----ctcggcctccc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 832775 85 - 2385121 tt----tttggtatat-acagagttttgccacg--------------------------------------ttgcccaggtcggtctctaactcctggg-------------------------c----tcaagtgat--------ctgcctgc----ctcggcctccc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278558 85 + 4274983 tt----tttggtagat-acagggttttgccatg--------------------------------------ttgcccaggtcggtctctaactcctggg-------------------------c----tcaagtgat--------ctgcctgc----ctcggcctccc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28511191 85 + 49145316 tt----ttttgtagat-acagggttttgccatg--------------------------------------ttgcccaagttggtctctaactcctggg-------------------------c----tcaagtgat--------ctgcctgc----ctgggcctccc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5353544 85 + 8899380 tt----tttcatagat-acagggttttgccatg--------------------------------------ttgcccaggttggtctctaactcctggg-------------------------c----tcaagtgat--------ctgcctgc----ctgggcctccc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1566736 86 - 2680843 tt----ttttgtagataacagggttttgccatg--------------------------------------ttacccaggttggtctctaactcctggg-------------------------c----tcaagtgat--------ctgcctgc----ccgggcctccc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 315163 93 - 4471408 tt----ttttgtagat-acagggttttgccatg--------------------------------------ttgcccaggttggtctctaactcctggg-------------------------c----tcaggtgatctgcctgcctgcctgc----ctgggcctcgc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5432863 90 + 5549422 ttgcagtttggccagg-gctgggttcaaacctg--------------------------------------tcaccc---tcggtatatggggccaggg-------------------------tcctacccactgag--------ccacaggc----tccgGCCTATC i otoGar3.GL873654 C 0 I 105 s canFam3.chr1 4568098 152 - 122678785 TT----TTTAATGGAT-AAAGTGTATTAGTTTGTAAAATACTTTATTCAAAAAGATTTTATTCTAATTTTTTTTTTAAGATTGATTTCTTTATCTggggtggggggcaaggtgagaattaggatc----tcaagcaaa--------ctccctgcggggtttgatctcac i canFam3.chr1 I 112 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 275548 563 + 643850 I e mm10.chr7 111059028 0 - 145441459 C a score=202981.000000 s hg38.chr19_GL383574v1_alt 27919 21 + 155864 aaagtgctgggattacaggtg s panTro5.chr19 36086742 21 + 61309027 aaagtgctgggattacaggtg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838733 21 + 64411610 aaagtgctgggattacaggtg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256494 21 - 8369475 aaagtgctgggattacaggtg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851487 21 - 106955855 aaagtgctgggattacaggtg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30160059 21 + 53671032 aaagtgctgggattacagatt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34612932 21 + 59248254 aaagtgctgggattacagatt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481027 21 - 13342542 aaagtgctgggattacagatt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411522 21 + 7714307 aaagtgctgggattacagatt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219387 21 + 50890351 aaagtgctgggattacagatt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 832860 21 - 2385121 aaagtgctgggattacagatt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278643 21 + 4274983 aaagtgctggcattacaggtt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28511276 21 + 49145316 aaagtgctgggattacaggtc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5353629 21 + 8899380 aaagtgttggggttacaggtc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1566822 21 - 2680843 aaagtgctgggattacaggtc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 315256 21 - 4471408 aaagtgctgggattataggtc i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4568250 18 - 122678785 --aaccctaagattatgacc- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 275548 563 + 643850 I e otoGar3.GL873654 5432953 105 + 5549422 I e mm10.chr7 111059028 0 - 145441459 C a score=129980.000000 s hg38.chr19_GL383574v1_alt 27940 11 + 155864 tgagccacagt s panTro5.chr19 36086763 11 + 61309027 tgagccacagt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838754 11 + 64411610 tgagccacagt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256515 11 - 8369475 tgagccacagt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851508 11 - 106955855 tgagccacagt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30160080 11 + 53671032 tgagccacagt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34612953 11 + 59248254 tgagccacagt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481048 11 - 13342542 tgagccacagt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411543 11 + 7714307 tgagccacagt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219408 11 + 50890351 tgagccacagt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 832881 11 - 2385121 tgagccacagt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278664 11 + 4274983 tgagccacagt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28511297 11 + 49145316 tgagccacagt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5353650 11 + 8899380 ggagctacagt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1566843 11 - 2680843 tgagccacagt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 315277 9 - 4471408 tgagc--cagt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5433058 11 + 5549422 tgagccaccgg i otoGar3.GL873654 I 105 C 0 s canFam3.chr1 4568268 11 - 122678785 tgagccgaaat i canFam3.chr1 C 0 I 42 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 275548 563 + 643850 I e mm10.chr7 111059028 0 - 145441459 C a score=55858.000000 s hg38.chr19_GL383574v1_alt 27951 14 + 155864 gtctggcTTGAAGT s panTro5.chr19 36086774 14 + 61309027 gtccggcTTGAAGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838765 14 + 64411610 gtccggcTTGAAGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256526 14 - 8369475 gtccggcTTGAAGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851519 14 - 106955855 gtccagcTTGAAGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30160091 7 + 53671032 gtccagc------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34612964 7 + 59248254 gtccagc------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481059 7 - 13342542 gtccagc------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411554 7 + 7714307 gtccagc------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219419 7 + 50890351 gtccagc------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 832892 7 - 2385121 gtccagc------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278675 7 + 4274983 gtccagc------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28511308 14 + 49145316 gtctagccTGAAGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5353661 14 + 8899380 gtccagccTGAAGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1566854 14 - 2680843 gtccagccTGAAGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 315286 14 - 4471408 gtccagccTGAAGT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5433069 14 + 5549422 cgccacccTGAAGT i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 275548 563 + 643850 I e mm10.chr7 111059028 0 - 145441459 C e canFam3.chr1 4568279 42 - 122678785 I a score=624758.000000 s hg38.chr19_GL383574v1_alt 27965 56 + 155864 AAGTTTTTTAGTGGACAAAGT---GTGAGTTGGTCT-------------------GTAAAATAATTTATTCCCAAGGG s panTro5.chr19 36086788 56 + 61309027 AAGTTTTTTAGTGGACAAAGT---GTGAGTTGGTCT-------------------GTAAAATAATTTATTCCCAAGGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838779 56 + 64411610 AAGTTTTTTAGTGGACAAAGT---GTGAGTTGGTCT-------------------GTAAAATAATTTATTCCCAAGGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256540 56 - 8369475 AAGTTTTTTAGTGGACAAAGT---GTGAGTTGGTCT-------------------GTAAAATAATTTATTCCCAAGGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851533 56 - 106955855 AAGTTTTTTAGTGGACAAAAT---GTGAGTTGGTCT-------------------GTAAAATAATTTATTCCCAAGGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30160098 56 + 53671032 AGATTTTTTAGTGGACAAAGT---GTGAGTTGGTCT-------------------ATAAAATAATTTATTCCCAAGGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34612971 56 + 59248254 AGATTTTTTAGTGGACAAAGT---GTGAGTTGGTCT-------------------ATAAAATAATTTATTCCCAAGGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481066 56 - 13342542 AGATTTTTTAGTGGACAAAGT---GTGAGTTGGTCT-------------------ATAAAATAATTTATTCCCAAGGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411561 56 + 7714307 AGATTTTTTAGTGGACAAAGT---GTGAGTTGGTCT-------------------ATAAAATAATTTATTCCCAAGAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219426 56 + 50890351 AGATTTTTTAGTGGACAAAGT---GTGAGTTGGTCT-------------------ATAAAATAATTTATTCCCAAGGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 832899 56 - 2385121 AGATTTTTTAGTGGACAAAGT---GTGAGTTGGTCT-------------------ATAAAATAATTTATTCCCAAGGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278682 56 + 4274983 AGATTTTTTAGTGGACAAAGT---GTGAGTTGGTCT-------------------GTAAAATAATTTATTCCCAAGGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28511322 56 + 49145316 AAATTTTTTAGTGGACAACGT---GTGAGTTGGTCT-------------------GTAAAATAATTTATTCCCAAGGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5353675 56 + 8899380 AAATTTTTTAGTGGACAAAGT---GTGAGTTGATCT-------------------GTAAAATAATTTATTCCCAAGGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1566868 59 - 2680843 AAATTTTTTAGTGGACAAAGTTCAGTGAGTTGGTCT-------------------GTAAAATAATTTACTCCCAAGGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 315300 56 - 4471408 AAATTTTTTAGTGGACAAAGT---GTGAGTTGGTCT-------------------GTAAAATAATTTATTCCCAAGGA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5433083 75 + 5549422 AGATTTTTAATTGTATAAAGT---GTGAGTTAGTCTAGTAAGTTAGAATAAATTAGTAAAGTAATTTGCTCAGAAGAG i otoGar3.GL873654 C 0 I 253 s mm10.chr7 111059028 32 - 145441459 AAGTTGT---GTAGATAAAGT---GTGAGTTGGTCA-------------------GG--------------------- i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 275548 563 + 643850 I e canFam3.chr1 4568279 42 - 122678785 I a score=1054406.000000 s hg38.chr19_GL383574v1_alt 28021 96 + 155864 CCTTATTCTAGTtttgtagggttttttgtttgtttgtttttttCTGGAAGAAAATGCGACCCAAAATGCCAGTTGGAATacttagcagctttttgg s panTro5.chr19 36086844 96 + 61309027 CCTTATTCTAGTtttgtagggttttttgtttgtttgtttttttCTGGAAGAAAATGCGACCCAAAATGCCAGTTGGAATacttagcagctttttgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838835 96 + 64411610 CCTTATTCTAGTtttgtagggttttttgtttgtttgtttttttCTGGAAGAAAATGCGACCCAAaatgccagttggaatacttagcagctttttgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256596 96 - 8369475 CCTTATTCTAGTtttgtagggttttttgtttgtttgtttttttCTGGAAGAAAATGCGACCCAAAATGCCAGTTGGAATacttagcagctttttgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851589 88 - 106955855 CCTTATTCTAGTTTTGTAGGGTTTTTTGTTTG--------TTTCTGGAAGAAAATGTAATCCAAAATGCCCGTTGGAATacttagcagctttttgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30160154 92 + 53671032 CCTTATTCTAGTTTGGTAGGGTTT----TTTGTTTGTTTGTTTCTGAAAGAAAATGTGACCCAAAATGCCAGTTGGAATacttagcagctttttgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34613027 92 + 59248254 CCTTATTCTAGTTTGGTAGGGTTT----TTTGTTTGTTTGTTTCTGAAAGAAAATGTGACCCAAaatgccagttggaatacttagcagctttttag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481122 92 - 13342542 CCTTATTCTAGTTTGGTAGGGTTT----TTTGTTTGTTTGTTTCTGAAAGAAAATGTGACCCAAAATGCCAGTTGGAATacttagcagctttttag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411617 96 + 7714307 CCTTATTCTAGTTTGGTAGGgttttttgtttgtttgtttgtttCTGAAAGAAAATGTGACCCAAAATGCCAGTTGGAATacttagcagctttttgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219482 92 + 50890351 CCTTATTCTAGTTTGGTAGGGTTT----TTTGTTTGTTTGTTTCTGAAAGAAAATGTGACCCAAAATGCCAGTTGGAATacttagcagctttttgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 832955 96 - 2385121 CCTTATTCTAGTTTGGTAGGgttttttgtttgtttgtttgtttCTGAAAGAAAATGTGACCCAAAATGCCAGTTGGAATacttagcagctttttgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278738 88 + 4274983 CCTTATTCTAGTTTGGTAGGGTTT--------TTTGTTTGTTTCTGAAAGAAAGTGTGACCCAAaatgccagttggaatacttagcagctttttgg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28511378 87 + 49145316 CCTTATTCTAGTTTGGGAGGTTTT--------TTTGTTTGTTTCTGGAAGAAAATGTGACCCAAAATGCCAGTTGGAATACTTAGCAGC-TTTTGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5353731 88 + 8899380 CCTTATTCTAGTTTGGGAGGTTTT--------TTTGTTTGCTTCTGGAAGAAAATGTGACCCAAAATGCCACTCGTAATACTTAGCAGCTTTTTGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1566927 88 - 2680843 CCTTATTCTAGTTTGGGAGGTTTT--------TTTGTTTGTTTCTGGAAGAAAATGTGACCCAAAATGCCAGTTGGAATACTTAGCAGCTTTTTGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 315356 88 - 4471408 CCTTATTCTAGTTTGGGAAGTTTT--------TTTGTTTTTTTCTGGAAGAAAGTATGACCCAAAATGCCAGTTGGAATACTTAGCAGCTTTTTGG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5433411 89 + 5549422 CCTTATTCTAGTTTTGTGTGGTTTT-------TTTGTTTGTTTTTGGAAAGAAATGTGACCCACAATGACAATGGGAATacttagtacctttttgt i otoGar3.GL873654 I 253 C 0 s mm10.chr7 111059060 74 - 145441459 --CTATTTTAATT-------------------CGTATGTGTTTCTGGAAGAGCATGTGACCCAACAGGTTGATTGTCATACAGAATA-CTCCTTGA i mm10.chr7 C 0 C 0 s canFam3.chr1 4568321 83 - 122678785 TCTTATTCTAGTTTTGTGGGGTGT-------------TTATTTCTCAAAGAAAATGTGACCCAAAAGGCCAGTTGGAATGcttagtagctctttga i canFam3.chr1 I 42 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 275548 563 + 643850 I a score=70038.000000 s hg38.chr19_GL383574v1_alt 28117 5 + 155864 tcttg s panTro5.chr19 36086940 5 + 61309027 tcttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838931 5 + 64411610 tcttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256692 5 - 8369475 tcttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851677 5 - 106955855 tcttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30160246 5 + 53671032 tcttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34613119 5 + 59248254 tcttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481214 5 - 13342542 tcttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411713 5 + 7714307 tcttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219574 5 + 50890351 tcttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 833051 5 - 2385121 tcttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278826 5 + 4274983 tcttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28511465 5 + 49145316 TCCTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5353819 5 + 8899380 TCTTG i saiBol1.JH378197 C 0 I 313 s cebCap1.NW_016107633v1 1567015 5 - 2680843 TCTTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 315444 5 - 4471408 TCTTG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5433500 5 + 5549422 ccttg i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111059134 5 - 145441459 CCACG i mm10.chr7 C 0 C 0 s canFam3.chr1 4568404 5 - 122678785 ccttg i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 276111 5 + 643850 ccAtg i dasNov3.JH563638 I 563 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I a score=19000.000000 s hg38.chr19_GL383574v1_alt 28122 1 + 155864 g s panTro5.chr19 36086945 1 + 61309027 g i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838936 1 + 64411610 g i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256697 1 - 8369475 g i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851682 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30160251 1 + 53671032 g i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34613124 1 + 59248254 g i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481219 1 - 13342542 g i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411718 1 + 7714307 g i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219579 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 833056 1 - 2385121 g i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278831 1 + 4274983 g i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28511470 1 + 49145316 G i calJac3.chr22 C 0 I 322 s saiBol1.JH378197 5354137 1 + 8899380 G i saiBol1.JH378197 I 313 C 0 s cebCap1.NW_016107633v1 1567020 1 - 2680843 G i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 315449 1 - 4471408 G i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5433505 1 + 5549422 g i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111059139 1 - 145441459 G i mm10.chr7 C 0 C 0 s canFam3.chr1 4568409 1 - 122678785 g i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 276116 1 + 643850 g i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I a score=178125.000000 s hg38.chr19_GL383574v1_alt 28123 12 + 155864 acaagttattta s panTro5.chr19 36086946 12 + 61309027 acaagttattta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838937 12 + 64411610 acaagttattta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256698 12 - 8369475 acaagttattta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851683 12 - 106955855 acaagttattta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30160252 12 + 53671032 acaagttattta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34613125 12 + 59248254 acaagttattta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481220 12 - 13342542 acaagttattta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411719 12 + 7714307 acaagttattta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219580 12 + 50890351 acaagttattta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 833057 12 - 2385121 acaagttattta i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278832 12 + 4274983 acaggttattta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28511793 12 + 49145316 ACAAGTTATTTA i calJac3.chr22 I 322 C 0 s saiBol1.JH378197 5354138 12 + 8899380 ACAAGTTATTTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1567021 12 - 2680843 ACAAGTTATTTA i cebCap1.NW_016107633v1 C 0 I 721 s aotNan1.NW_018505377v1 315450 12 - 4471408 AGAAGTTATTTA i aotNan1.NW_018505377v1 C 0 I 2464 s otoGar3.GL873654 5433506 12 + 5549422 acaaattattta i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111059140 5 - 145441459 ACAAG------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4568410 12 - 122678785 acaagttattta i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 276117 12 + 643850 acaagttattta i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I a score=789357.000000 s hg38.chr19_GL383574v1_alt 28135 90 + 155864 accttagctttaact-tc-ttc-------------------------------atcttttca--ataggg-------------------------------------------------atggataataat-gcccatctttcagagtcattctgataattaaatgaggtgatat s panTro5.chr19 36086958 86 + 61309027 accttagctttaact-tc-ttc-------------------------------atcttttca--ataggg-------------------------------------------------atggataat-----cccatctttcagagtcattctcataattaaatgaggtgatat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39838949 86 + 64411610 accttagctttaact-tc-ttc-------------------------------atcttttca--ataggg-------------------------------------------------atggataat-----cccatctttcagagtcattctgataattaaatgaggtgatat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256710 89 - 8369475 accttagctttaact-tc-ttc-------------------------------atc-tttca--ataggg-------------------------------------------------atggataataat-gcccatctttcagagtcattctgataattaaatgaggtgatat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851695 91 - 106955855 accttagctttaact-tc-ttc-------------------------------atcttttca--ataggg-------------------------------------------------atggataatattagcccatctttcagagtcattctgataattaaatgaggtgatat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30160264 90 + 53671032 accttagctttgact-tc-ttc-------------------------------atcttttca--atagga-------------------------------------------------atggataataat-gcccatctttcagagtccttctgataattaaatgaggtgatgt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34613137 90 + 59248254 accttagctttgact-tc-ttc-------------------------------atcttttca--atagga-------------------------------------------------atggataataat-gcccatctttcagagtccttctgataattaaatgaggtgatgt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481232 90 - 13342542 accttagctttgact-tc-ttc-------------------------------atcttttca--atagga-------------------------------------------------atggataataat-gcccatctttcagagtccttctgataattaaatgaggtgatgt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411731 90 + 7714307 accttagctttaact-tc-ttc-------------------------------atcttttca--atagga-------------------------------------------------atggataataat-gcccatctttcagagtccttctgataattaaatgaggtgatgt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219592 90 + 50890351 accttagctttaact-tc-ttc-------------------------------atcttttca--atagga-------------------------------------------------atggataataat-gcccatctttcagagtccttctgataattaaatgaggtgatgt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 833069 90 - 2385121 accttagctttaact-tc-ttc-------------------------------atcttttca--atagga-------------------------------------------------atggataataat-gcccatctttcagagtccttctgataattaaatgaggtgatgt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278844 90 + 4274983 accttagctttaact-tc-ttc-------------------------------atcttttca--atagga-------------------------------------------------atggataataat-gcccatctttcagagtcattcggataattaaatgaggtgatat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28511805 77 + 49145316 -----------ACCT-TC-TTT-------------------------------ATCTTTTCA--ATAGGG-------------------------------------------------ATGGATAATAAT-GTTCATCTTTCAGAGTCATTCTGATAGTTAAAAGAGGTGAT-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5354150 79 + 8899380 -----------ACCT-TC-TTT-------------------------------ATCTTTTCA--GTAGGG-------------------------------------------------ATGGATAATAAT-GTTCATCTTTCAGAGTCATTCTGTTAGTTAAAAGAGGTGATAT i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5433518 86 + 5549422 accttagctttaact-ta-ttt-------------------------------gtttgttcc--attgga-------------------------------------------------atg----ataat-gcccttctttctgagtcattctgttaattaaatgaggtgatat i otoGar3.GL873654 C 0 I 273 s mm10.chr7 111059145 79 - 145441459 -----GGTTTTAACA-TCTTTT-------------------------------ATCTTGTCC--GTGGGA-------------------------------------------------ATG-----TAAT-GCCTACCTTTT--ACTCATCCTGATAATTACATGAAGTGTTGC i mm10.chr7 C 0 I 2 s canFam3.chr1 4568422 168 - 122678785 accATAGCTTTAACT-AC-TTCttttattttttttaatattttattttattttatttATTCATGATGGGGGGgagggagagagagagagagagagGCAGAAGAACTACTtcttttaaatatagacgatagt-gcccatctttc--agtcattctgagaattaaatgaggtaat-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 276129 87 + 643850 atctaatatgtagccacc-ctc-------------------------------ctttttgaa--atagga-------------------------------------------------at----aataat-gcccatctttctgagtcattctgggaattaaatgaggtaatat i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e cebCap1.NW_016107633v1 1567033 721 - 2680843 I a score=34678.000000 s hg38.chr19_GL383574v1_alt 28225 5 + 155864 aAAAG s panTro5.chr19 36087044 5 + 61309027 aAAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39839035 5 + 64411610 aaaag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256799 5 - 8369475 aAAAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851786 5 - 106955855 aaaag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30160354 5 + 53671032 aaaag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34613227 5 + 59248254 aaaag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481322 5 - 13342542 aAAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411821 5 + 7714307 aAAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219682 5 + 50890351 aAAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 833159 5 - 2385121 aaaag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278934 5 + 4274983 aaaag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28511882 4 + 49145316 -AAGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5354229 5 + 8899380 AAAGA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5433877 5 + 5549422 aaaaa i otoGar3.GL873654 I 273 C 0 s mm10.chr7 111059226 3 - 145441459 AAA-- i mm10.chr7 I 2 C 0 s canFam3.chr1 4568590 5 - 122678785 aacaa i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 276216 3 + 643850 aaa-- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e cebCap1.NW_016107633v1 1567033 721 - 2680843 I a score=148250.000000 s hg38.chr19_GL383574v1_alt 28230 11 + 155864 AAGTAACTAGT s panTro5.chr19 36087049 11 + 61309027 AAGTAACTAGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39839040 11 + 64411610 aagtaactagt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256804 11 - 8369475 AAGTAACTAGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63851791 11 - 106955855 aagtaactagt i nomLeu3.chr10 C 0 I 1301 s rheMac8.chr19 30160359 11 + 53671032 aagtaactagt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34613232 11 + 59248254 aagtaactagt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481327 11 - 13342542 AAGTAACTAGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411826 11 + 7714307 AAGTAACTAGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219687 11 + 50890351 AAGTAACTAGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 833164 11 - 2385121 aagtaactagt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278939 11 + 4274983 aagtaactagt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28511886 11 + 49145316 AAGTAACTAGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5354234 11 + 8899380 AAGTAACTAGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1567754 11 - 2680843 aaGTAACTAGT i cebCap1.NW_016107633v1 I 721 C 0 s otoGar3.GL873654 5433882 11 + 5549422 aagtagccagt i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111059229 11 - 145441459 AAGTAATAAAT i mm10.chr7 C 0 C 0 s canFam3.chr1 4568595 11 - 122678785 aagtaattagt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 276219 7 + 643850 ----aactatt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I a score=2540130.000000 s hg38.chr19_GL383574v1_alt 28241 298 + 155864 TTAATGTTGGTGCTTAATAGAG------AATAGCTGTCCCA-TGTTAtttccca-ccacgatctccctctctgtctaggtgctc-agtctctctagtagcccaact-cagtcagtcattcacac------ctactgtagtctactgtc------atcttactgcctttcactg---tcctctcattccc-ctcataactttacttccttc-tttatcctgcttcaactccatgagcaaccacgacagtcag------------tac-----acattccctcagcccccaccccattcccct-cttgctgtcttatac-------a---------a-------g------aaatcacaaccctga--tt-atatca- s panTro5.chr19 36087060 294 + 61309027 TTAATGTTGGTGCTTAATAGAG------AATAGCTGTCCCA-TGTTAtttccca-ccacgatctccctctctgtctaggtgctc-agtctctctagtagcccaact-ctgtcagtcattcacac------ctactgtaatctaccgtc------atcttactgcctttcactg---tcctctcattccc-ctcataactttacttcc-----ttatcctgcttcaactccatgagcaaccacgacagccag------------tac-----acattccctcagcccctaccccattcccct-cttgctgtcttatac-------a---------a-------g------aaatcacaaccctga--tt-atatta- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39839051 294 + 64411610 ttaatgttggtgcttaatagag------aatagctGTCCCA-TGTTAtttccca-ccacgatctccctctctgtctaggtgctc-agtctctctagtagcccaact-ctgtcagtcattcacac------ctactgtaatctaccgtc------atcttactgcctttcactg---tcctctcattccc-ctcataactttacttcc-----ttatcctgcttcaactccatgagcaaccacgacagccag------------tac-----acattccctcagcccctaccccattcccct-cttgctgtcttatac-------a---------a-------g------aaatcacaaccctga--tt-atatta- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6256815 298 - 8369475 TTAATGTTGGTGCTTAATAGAG------AATAGCTGTCCCA-TGTTAtttccca-ccacgatctccctctctgtctaggtgctc-agtctctctagtagcccaact-ctgtcagtcattcacac------ctactgtagtctaccatc------atcttactgcctttcactg---tcctctcattccc-ctcataactttacttccttc-tttatcctgcttcaactccaagagcaaccacgacagtcag------------tac-----acattccctcagcccctaccccattcccct-cttgctgtcttatac-------a---------a-------g------aaatcacaaccctga--tt-atatca- i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30160370 298 + 53671032 ttaatgttggtgcttaatagag------aatagctGTCCTG-TGTTAtttccca-ccaccatctccctctctgtctaggtgctc-agtctctctagtagcccaact-ctgtcagtcattcacac------ctactgtagtgtaccatc------atcttactgcctttcactg---tcctgtcattccc-ctcataactttacttccctc-tttatcctgcttcaactccatgagccaccgtgacagtcag------------tac-----acatacccacagcccctaccctattcccct-cttgctgtcttatac-------a---------a-------g------aaatcacaaccctga--tt-atatca- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34613243 298 + 59248254 ttaatgttggtgcttaataGAG------AATAGCTGTCCTG-TGTTAtttccca-ccaccatctccctctctgtctaggtgctc-agtctctctagtagcccaact-ctgtcagtcattcacac------ctactgtagtgtaccatc------atcttactgcctttcactg---tcctgtcattccc-ctcataactttacttccctc-tttatcctgcttcaactccatgagccaccgtgacagtcag------------tac-----acatacccacagcccctaccctattcccct-cttgctgtcttatac-------a---------a-------g------aaatcacaaccctga--tt-atatca- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481338 298 - 13342542 TTAATGTTGGTGCTTAATAGAG------AATAGCTGTCCTG-TGTTAtttccca-ccaccatctccctctctgtctaggtgctc-agtctctctagtagcccaact-ctgtcagtcattcacac------ctactgtagtgtaccatc------atcttactgcctttcactg---tcctgtcattccc-ctcataactttacttccctc-tttatcctgcttcaactccatgagccaccgtgacagtcag------------tac-----acatacccacagcccctaccctattcccct-cttgctgtcttatac-------a---------a-------g------aaatcacaaccctga--tt-atatca- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5411837 294 + 7714307 TTAATGTTGGTGCTTAATAGAA------AATAGCTGTCCTG-TGTTAtttccca-ccaccatctccctctctgtctaggtgctc-agtctctctagtagcccaact-ct----gtcatttacac------ctactgtagtgtaccatc------atcttactgcctttcattg---tcctgtcattccc-ctcataactttacttccctc-tttatcctgcttcaactccatgagccactgtgacagtcag------------tac-----acatacccacagcccctaccctattcccct-cttgctgtcttatac-------a---------g-------t------aaatcacaaccctga--tt-atatca- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219698 296 + 50890351 TTAATGTTGGTGCTTAATAGAG------AATAGCTGTCCTG-TGTTAtttccca-ccaccatctccctctctgtctaggtgctc-agtctctctagtagcccaact-ctgtcagtcattcacac------ctactgtagtgtaccatc------atcttactgcctttcactg---tcctctcattccc-ctcataactttacttccctc-tttatcctgcttcaactccatgagccaccgtgacagtcag------------tac-----acatacccccagcccctacccta--cccct-cttgctgtcttatac-------a---------a-------g------aaatcacaaccctga--tt-atatca- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 833175 298 - 2385121 ttaatgttggtgcttaatagag------aatagctGTCCTG-TGTTAtttccca-ccaccatctccctctctgtctaggtgctc-agtctctctagtagcccaact-ctgtcagtcattcacac------ctactgtagtgtaccatc------atcttactgcctttcactg---tcctgtcattccc-ctcataactttacttccctc-tttatcctgcttcaactccatgagccaccgtgacagtcag------------tac-----acatacccacagcccctaccctattcccct-ctggctgtcttatac-------a---------g-------g------aaatcacaaccctga--tt-atatca- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2278950 298 + 4274983 ttaatgttggtgcttaatagag------aatagctGTTCCG-TGTTAtttccca-ccaccatctccctctctgtctaggtgctc-agtctctctagtaacccaact-ctgtcagtcattcacac------ctactgtagtgtaccgtc------atcttactgcctttcactg---tcctctcattccc-ctcataactttacttccctc-tttatcctgcttgaactccatgagcaaccatgatagtcag------------tac-----acatacgcacagcccctaccctattcccct-cttgctgtcttatac-------a---------a-------g------aaatcacaaccctga--tt-atatca- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28511897 293 + 49145316 TTAATGTTGGTGCTTAATAAAG------AATAGCTGTCCTAATGTTGtttccca-ccaccatcttcatctctgtctagttgctc-ag--tctctagtagcccaactcttgtcagtcattcacaa------ctactgtagtctacagtcaccataatcttactgccttttactg---tcctctcattccc-ctcataactttatttccctc-tttatcctgcttcaactccatgag---------caatcag------------tac-----acataccctcagcccccacccgctt-ccct-cttgctgt-gtacat-------a---------a-------g------aaatcacaaccctga--tt-gtatcA- i calJac3.chr22 C 0 I 2096 s saiBol1.JH378197 5354245 301 + 8899380 TTAATGTTGGTGCTTAATAAAG------AATAGCTGTCCCATTGTTGTTTCcca-ccacca---tcatctctgtctagttgctc-ag--tctctagtagtccaact-gtgtcagtcattcacaa------ctactgtagtctacagtcaccttaatcttactgccttttactg---tcctctcattccc-ctcataactttacttccctcttttatcctgcgtcaactccatgagcagctgtgacaatcag------------tac-----acataccctcagcccccatccccttcccct-cttgctgtcttacac-------a---------a-------g------aaatcacaaccctga--tt-atatca- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1567765 285 - 2680843 TTAATGTTAGTTCTTAGTAAAG------AATAGCTGTCCCATTGTTGtttccca-ccaccgtcttcatctctgtctagttgctc-ag--tctctagtagcccaact--------------------------actatagtctacagtaaccttaatcttactgccttttactg---tcctctcattccc-ctcataactttacttccctc-tttatcctgcttccactccatgagcaactgtgacaatcag------------tac-----acataccctcagcccccacccttttcccct-cttgctatcttacac-------a---------a-------g------aaatcacaactctga--ttaatatca- i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5433893 291 + 5549422 ttactacaggcgcttaatagtagctgttattaGCTATTCCATTGTTGtttccca-ccactgtctccatctctgttgaggtgccc-agtctctctcgta-cccagtt-----cagtcactcagac------ctatcatactctctagtcttcttgatcttactgcctttctctg---tcttctcattccc-c-cataattttttctcctct---------------attccatgagcagctgttagaatcag------------tgc-----atacacccgcagcccct--------caccc-cttgct-tcttgtac-------a---------cgcttggtg------aaatcacaaccctgAACCT-GTTTCA- i otoGar3.GL873654 C 0 I 29 s mm10.chr7 111059240 274 - 145441459 ----------TACTTAATGA--------AATAGC------A-AAGCATT------------------------TTTAAGTACTT-AG--TGGCTAAAACCCCAACT-TTTATAATCTGTCAGGCTCTTCTTTACTACGGTGT--CTTC------GTCTGACAGTCTTTCAGTG----CACCTCATTCTCACTCATCGCTTCACTGTC----TTTGTCCTGTTTACGTTCCAAGATCAGTCATTCCAGTCAGAGAATTGTACCCTCC-----TCAT-TCCACACCCCCTACACCTCTCTTGTACTTACTCTTGTACAT-------ATGAGCTTGCA-------G------AAGTCACAGCTCTCG--TT-ATA---- i mm10.chr7 C 0 C 0 s canFam3.chr1 4568606 293 - 122678785 ttactgtaggtgcctaatagag------agtaaCTATCTTGTTGctattttttagccaccatctccatctctgtc--------------tctctagcacccaaact-ccataaattattcagac------ctactatagtctgttg--------atcttactacctttcactcactgccccacatcccc-ctcatgactttacttccctc-tttatcctgtttaaattccatgagta---gttacaatcag------------tcc--tgagcataaactcacccac--ccccgtccctct-cctgctttctttcaccagcttaa---------a-------g------aaaccacagtcgtgt--tt-atacca- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 276226 292 + 643850 ------tacatactTAATAGAG------GGTAGCTATCCCATTGCTATTTCCAG-TCA------CTTTCTTTGTCTAGGTGCTCAAGTCTCTGAATTA-----ACT-CATTCATTAAttcaaac------acactgtagtttacagcc-tgttgatcctaccacttttcacca---tca-ctgattccc-ctcataactttacttc-----cttgttctgcttatattccatgagcaattgttacaatcag------------taccttgcacataacctcaacacc---ccttcccctct-cttgttttcttgcat-------a---------a-------gtttggagaaactcaaccctga--tt-atatcta i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e nomLeu3.chr10 63851802 1301 - 106955855 I a score=490924.000000 s hg38.chr19_GL383574v1_alt 28539 61 + 155864 acacagatgt-gctgaccagcctcactctaaatttat----g--------------------------------------------------------------------------------------ttcgct---------agcctcc------------------------------------------------------------------------------------------gcagtcatggt s panTro5.chr19 36087354 61 + 61309027 acacagatgt-gctgaccagcctcactctaaatttat----g--------------------------------------------------------------------------------------ttggct---------agcctcc------------------------------------------------------------------------------------------gcagtcatggt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39839345 61 + 64411610 acacagatgt-gctgaccagcctcactctaaatttat----g--------------------------------------------------------------------------------------ttcgct---------agcctcc------------------------------------------------------------------------------------------gcagtcatggt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6257113 61 - 8369475 acacagatgt-gctgaccagcctcactctaaatttat----g--------------------------------------------------------------------------------------ttcgct---------agcctcc------------------------------------------------------------------------------------------gcagtcatggt i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30160668 61 + 53671032 gcacagatgt-gctgaccagcctcactctaaatttat----g--------------------------------------------------------------------------------------ttcgct---------agcctca------------------------------------------------------------------------------------------gcagtcatggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34613541 61 + 59248254 gcacagatgt-gctgaccagcctcactctaaatttat----g--------------------------------------------------------------------------------------ttcgct---------agcctca------------------------------------------------------------------------------------------gcagtcatggt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481636 61 - 13342542 gcacagatgt-gctgaccagcctcactctaaatttat----g--------------------------------------------------------------------------------------ttcgct---------agcctca------------------------------------------------------------------------------------------gcagtcatggt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5412131 61 + 7714307 gcacagatgt-gctgaccagcctcactctaaatttat----g--------------------------------------------------------------------------------------ttcgct---------agcctca------------------------------------------------------------------------------------------gcagtcatggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29219994 61 + 50890351 gcacagatgt-gctgaccagcctcactctaaatttat----g--------------------------------------------------------------------------------------ttcgct---------agcctca------------------------------------------------------------------------------------------gcagtcatggt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 833473 61 - 2385121 gcacagatgt-gctgaccagcctcactctaaatttat----g--------------------------------------------------------------------------------------ttcgct---------agcctca------------------------------------------------------------------------------------------gcagtcatggt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2279248 61 + 4274983 gcacagatgt-gctgaccagcctcattctaaatttat----g--------------------------------------------------------------------------------------ttcgct---------agcctca------------------------------------------------------------------------------------------gcagtcatggt i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5354546 61 + 8899380 acacagatgt-gctgaccagcctcaccctaaatttat----g--------------------------------------------------------------------------------------tttgct---------aacctca------------------------------------------------------------------------------------------gcagtcatggt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1568050 61 - 2680843 acacagatgt-gctgaccagcctcaccctaaatttat----g--------------------------------------------------------------------------------------ttcgct---------aacctca------------------------------------------------------------------------------------------gcagtcatggt i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5434213 247 + 5549422 gtacggctgtagacAACCTGTTTTACTCTGAATTTAT----GCCTATGTTCAGGTtttttttatttttttatttttttatttttttgagacagagcctcaagctgtcccctgggtagagtgctatggcttcgctgctcacagcaacctccaactcctgggctcaagtgcgactcctgcctccgcctcccaagtatctgggaccacaggtgcccatgacaacgcctggctattttttggttgcagtcatcgt i otoGar3.GL873654 I 29 I 134 s mm10.chr7 111059514 53 - 145441459 -------------TAACCATCTTCACTCTGCATTTACTGGGA--------------------------------------------------------------------------------------TTCACA---------CACCTCA------------------------------------------------------------------------------------------GCAGTCTTAGC i mm10.chr7 C 0 C 0 s canFam3.chr1 4568899 61 - 122678785 acacagacat-gctgaccagtttcaccttaaatttac----a--------------------------------------------------------------------------------------ttcact---------aacctca------------------------------------------------------------------------------------------ttagtcatagt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 276518 61 + 643850 acacagacat-gctgaccagtttctctctaaatttat----g--------------------------------------------------------------------------------------gtcact---------aaccaca------------------------------------------------------------------------------------------gcaatcatggc i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e calJac3.chr22 28512190 2096 + 49145316 I e nomLeu3.chr10 63851802 1301 - 106955855 I a score=1367216.000000 s hg38.chr19_GL383574v1_alt 28600 160 + 155864 cacttcctagcagtcacactatactt-ccataat--cc----atttcacttttctacatggc-----tattcca-----tt-----cattttcctcaagcctccaaca---cctcc-cccatattcactttcagcccctt-aaccgtgctttctatagcagttaactgagaaaagaacagcaaacga s panTro5.chr19 36087415 160 + 61309027 cacttcctagcagtcacactatactt-ccataat--cc----atttcacttttctacatggc-----tattcca-----tt-----cattttcctcaagcctccaaca---cctcc-cccatattcactttcagcccctt-aaccgtgccttctatagcagttaactgagaaaagaacagcaaacga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39839406 160 + 64411610 cacttcctagcagtcacactatactt-ccataat--cc----atttcacttttctacatggc-----tattcca-----tt-----cattttcctcaagcctccaaca---cctcc-cccatattcactttcagcccctt-aaccgtgccttctatagcagttaactgagaaaagaacagcaaacga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6257174 160 - 8369475 cacttcctagcagtcacactatactt-ccataat--cc----atttcacttttctacatggc-----tattcca-----tt-----cattttcctcaagcctccaaca---cctcc-cccatattcactttcagcccctt-aaccgtgctttctatagcagttaactgagaaaagaacagcaaacga i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30160729 163 + 53671032 cacttcctagcagtcacactatactt-ccataat--cc----atttcacttttctacatggc-----tgttcca-----tt-----cattttcctcaagcctccaacacttcctcc-cccatcttcactttcagcccttt-aaccgtgctttctgtaatagttaactgagaaaagaacagcaaacga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34613602 163 + 59248254 cacttcctagcagtcacactatactt-ccataat--cc----atttcacttttctacatggc-----tgttcca-----tt-----cattttcctcaagcctccaacacttcctcc-cccatcttcactttcagcccttt-aaccgtgctttctgtaatagttaactgagaaaagaacagcaaacga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481697 163 - 13342542 cacttcctagcagtcacactatactt-ccataat--cc----atttcacttttctacatggc-----tgttcca-----tt-----cattttcctcaagcctccaacacttcctcc-cccatcttcactttcaccccttt-aaccgtgctttctctaatagttaactgagaaaagaacagcaaacga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5412192 163 + 7714307 cacttcctagcagtcacactatactt-ccataat--cc----gtttcacttttctacatggc-----tgttcca-----tt-----cattttcctcaagcctccaacacttcctcc-cccatcttcactttcagcccttt-aaccgtgctttccataatagttaactgagaaaagaacagcaaacga i cerAty1.NW_012005268v1 C 0 I 1865 s chlSab2.chr6 29220055 163 + 50890351 cacttcctagcagtcacactatactt-ccataat--cc----atttcacttttctacatggc-----tgttcca-----tt-----cgttttcctcaagcctccaacacttcctcc-cccatcttcaatttcagcccttt-aaccgtgctttctataatagttaactgagaaaagaacagcaaacaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 833534 163 - 2385121 cacttcctagcagtcacactatactt-ccataat--cc----atttcacttttctacatggc-----tgttcca-----tt-----cattttcctcaagcctccaacacttcctcc-cccatcttcactttcagcccttt-aaccgtgctttctataatagttaactgagaaaagaacagcaaacga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2279309 162 + 4274983 cacttcctagcagtcacactatactt--cataat--cc----atttcacttttctacatggc-----tgttcca-----tt-----cattttcatcaagcctcgaacacttcctcc-cccatcttcactttcagcccttt-aaccgtgctttctataatagttaactgagaaaagaacagcaaacga i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5354607 167 + 8899380 cacttcctagcagtcacactgtacct--tataat--ccattaatttcacttttctaaatggc-----tattcca-----tt-----cattttcctcaaacctccaacacctcctcc-gccatcttcactttcagccccttaaaccatgctttctgtaataggtaactgagaaaagaacagcaaatga i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1568111 167 - 2680843 cacttcctagcagtcacactgtacct--cataat--ccattcatttcacttttcggaatggc-----tagtcca-----tt-----cattttcctcaaacctccaacacctcctct-cctatcttcactttaagccccttaaaccatgctttctgtaatagttaactgagaaaagaacagcaaacga i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5434594 167 + 5549422 CActtcctagcagttacgctctatttcccatagt--tcattcatttcacttttctacagggccgttgtattcct-----tt-----tcttttcctcatatctccaataccacctccacttatcttcacttttagactgtt-aaccttgctttctat-----ttaactgagaaaagaatagcaaac-- i otoGar3.GL873654 I 134 C 0 s mm10.chr7 111059567 158 - 145441459 AGTTTTGCAGGAGTCATGCTGTATTT-CCATTCT--CT----ACT---CTTTTCTGTGAGGCTCCTGTGTTCCT-----GC-----TCTTTTCTTCAGACCTTCAACA-TTTGTAT-CCCAGTTTTACTTTCATTCTGTT-AACT-TGATTTCTTT-----TTAACTAGGCAAAGAgggactggcga i mm10.chr7 C 0 C 0 s canFam3.chr1 4568960 165 - 122678785 tatttccctgcagtcatactgtactt-ccacggt--ctactcattccaatgtcctgcatgac-----tcttcca-----ttctctccattttcctcagacctccaacgcc-tcttg-cccatcttcacttttaacctgtg-aacc-tgtttcctat-----ttaattgaggaaagcatagcaaacag i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 276579 154 + 643850 cacttcctagcagtcatactatattt-ccagattggac----atgccacttttctagatggc-----tcttccatctcttt-----tcttttcctcagcctttcaacacctcctcc-ccgtcct----------cctttc-agccttgattcctat------taactgagaaaagaatagtaaacag i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e calJac3.chr22 28512190 2096 + 49145316 I e nomLeu3.chr10 63851802 1301 - 106955855 I a score=20010.000000 s hg38.chr19_GL383574v1_alt 28760 2 + 155864 aa s panTro5.chr19 36087575 2 + 61309027 aa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39839566 2 + 64411610 aa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6257334 2 - 8369475 aa i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30160892 2 + 53671032 aa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34613765 2 + 59248254 aa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481860 2 - 13342542 aa i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29220218 2 + 50890351 aa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 833697 2 - 2385121 aa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2279471 2 + 4274983 aa i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5354774 2 + 8899380 aa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1568278 2 - 2680843 aa i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5434761 2 + 5549422 aa i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111059725 2 - 145441459 ga i mm10.chr7 C 0 I 1324 s canFam3.chr1 4569125 2 - 122678785 aa i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 276733 2 + 643850 aa i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e calJac3.chr22 28512190 2096 + 49145316 I e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I e nomLeu3.chr10 63851802 1301 - 106955855 I a score=1459404.000000 s hg38.chr19_GL383574v1_alt 28762 225 + 155864 gataattttgataaacttacccctcacatacccagttacctgcatctgttccccagacttcta--------tgtttttttctgatcaatat-ggataaactgttcttatttctgtct-aagaccacccttccactt--g-tgcagca---tttgtcccctcttggtgattcaagaacattgctccagcagttctctactc-----------tcctcag-t----ttttccttccctaacgtatc-tttc-tgtctgctt s panTro5.chr19 36087577 225 + 61309027 gataattttgataaacttacccctcacatacccagttacctgcatctgttccccagacttcta--------tgtttttttctgatcaatat-ggataaactgttcttatttctgtct-aagaccacccttccactt--g-tgcagca---tttgtcccctcttggtgattcaagaacattgctccagcagttctctactc-----------tcctcag-t----ttttccttccctaacgtatc-tttc-tgtctgctt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39839568 225 + 64411610 gataattttgataaacttacccctcacatacccagttacctgcatctgttccccagacttcta--------tgtttttttctgatcaatat-ggataaactgttcttatttctgtct-aagaccacccttccactt--g-tgcagca---tttgtcccctcttggtgattcaagaacattgctccagcagttctctactc-----------tcctcag-t----ttttccttccctaacgtatc-tttc-tgtctgctt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6257336 226 - 8369475 gataattttgataaacttacccctcacatacccagttacctgcatctgttccccagacttcta--------tgtttttttctgatcaatat-ggataaactgttcttatttctgtct-aagaccacccttccactt--g-tgcagca---tttgtcccctcttggtgattcaagaacattgctccagcagttctctactc-----------tcctcagtt----ttttccttccctaacgtatc-tttc-tgtctgctt i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30160894 227 + 53671032 gataattttgataaacttacccctcatatacccaattacctgcatccgtcccccaaacttcta------tttttttttttctgataaatat-ggataaactgttcttacttctgtct-aagaccacccttccgctt--g-tgcagta---ttcgtcccctcttggtgagtcaaggacattgctccagcagttctctactc-----------tcctcag-t----ttttccttccctaacgcatc-tttc-tgtctgctt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34613767 227 + 59248254 gataattttgataaacttacccctcatatacccaattacctgcatccgtcccccaaacttcta------tttttttttttctgataaatat-ggataaactgttcttacttctgtct-aagaccacccttccgctt--g-tgcagta---ttcgtcccctcttggtgagtcaaggacattgctccagcagttctctactc-----------tcctcag-t----ttttccttccctaacgcatc-tttc-tgtctgctt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4481862 226 - 13342542 gataattttgataaacttacccctcatatacccaattacctgcatccgtcccccaaacttcta-------ttttttttttctgataaatat-ggataaactgttcttacttctgtct-aagaccacccttccgctt--g-tgcagta---tttgtcccctcttggtgagtcaaggtcattgctccagcagttctctactc-----------tcctcag-t----ttttccttccctaacgcatc-tttc-tgtctgctt i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29220220 230 + 50890351 gataattttgataaacttacccttcatatacccaattacctgtatccttcccccaaacttcta---ttttttttttttttctggtaaatat-ggataaactgttcttacgtctgtct-aagaccacccttccgctt--g-tgcagta---ttcgtcccctcttggtgagtcaaggacattgctccagcagttctctactc-----------tcctcag-t----ttttccttgcctaacgcatc-tttc-tgtctgctt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 833699 227 - 2385121 gataattttgataaacttacccctcatatacccaattacctgcatccgtcccccaaacttcta------tttttttttttctgataaatat-ggataaactgttcttacttctgtct-aagaccacccttccgctt--g-tgcagta---ttcgtcccctcttggtgagtcaaggacattgctccagcggttctctactc-----------tcctcag-t----ttttccttccctaacgcatc-tttc-tgtctgctt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2279473 227 + 4274983 gataattttgataaacttaccc-tcatatgtccagttacctgcat-catcccccaaacttctatgttgttttttttttttctgataaatat-ggatacactgttct----tctgtct-aagaccacccttccactt--g-tgcagca---ttcatcccctcttggtgagtcaaggacattgctccagcagttctctactc-----------tcctcag-t----ttttccttccctaatgtatc-tttc-tgtctgctt i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5354776 221 + 8899380 gagaattttggtaaacttacccctcatatacccagtcacctgcatctgtcccccaaacttc----------tgtttttttctgatcaatat-ggataaa--cttcttactgctgtct-aagaccatccttccactt--g-tgcagca---tttgtctccttttggcgattcaaggacattgctccagcagttgtctactc-----------ttgcctg-t----ttttccttccctaatgtagc-tttc-tgtctgctt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1568280 225 - 2680843 gagaattttggtaaacttacccctcatctacccagttacctggatctgttccccgaacttcta--------tgtttttttctcatcaatat-ggataaagtgttcttacttctgtct-aagaccatccttccactt--g-tgcagca---ttcgtctcctgttggtgattcaaggacattgctccagcagttgtctactc-----------ttccctg-t----ttttccttccctaacgtatc-tttc-tgtctgctt i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5434763 214 + 5549422 gagaattttgataaacttatcccacacgtacccagttccctgcatcagtaccccaaa-----------------------ctgaacagtat-agatacgctgttct----tctgtctgaacaccacccctccactt--accccagca---ctcatcccctcctgatgattcacaggccttgttcctgctgttctctattctcact-----GTCCTCTT-T----TCTACCTATTTCCACATTTC-TTTC-TTTCTTTtt i otoGar3.GL873654 C 0 I 943 s canFam3.chr1 4569127 229 - 122678785 gagaattttgattaactcatctcacatggacccaatttctcacatctgtgctccacacctcta---------ctttttcactggtcactttcagagaaagtgttcgttcttctctgt-caggccacccttcccctttgg-aatagat---ttcatcccctctt---gatttgaagtagctgctttagcagttctctacat-----------ctgtgaa-ttgagtttttcttctctaccagatcttttc-tatctacat i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 276735 229 + 643850 gagaactttgataaactcatcccacatgtacttactta-gtacatctgtgccccaacactctc---------ccgtctctttagttaatat-----aagctgttctt---tctg-ct-aagaccatccttctactt--g-tacagtagattttaatccttcttgatgattcaagaacattgctacagttgtcctctattc-cattctttcatattcaa-a----ttttctttctctactggatt-tttcatatctactt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e mm10.chr7 111059727 1324 - 145441459 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e calJac3.chr22 28512190 2096 + 49145316 I e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I e nomLeu3.chr10 63851802 1301 - 106955855 I a score=197838.000000 s hg38.chr19_GL383574v1_alt 28987 33 + 155864 acagataggcag----ttatttcttctaccttaagaa s panTro5.chr19 36087802 33 + 61309027 acagataggcag----ttatttcttctatcttaagaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39839793 33 + 64411610 acagataggcag----ttatttcttctatcttaagaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6257562 33 - 8369475 acagataggcag----ttatttcttctatcttaagaa i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30161121 33 + 53671032 acagacaggcga----ttatttcttctatcttaagaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34613994 33 + 59248254 acagacaggcga----ttatttcttctatcttaagaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4482088 33 - 13342542 acagacaggcga----ttatttcttctatcttaagaa i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29220450 33 + 50890351 acagacaggcga----ttatttcttctatcttaagaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 833926 33 - 2385121 acagacaggcga----ttatttcttctatcttaagaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2279700 33 + 4274983 acagacaggcga----ttatttcttctatcttaatta i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5354997 37 + 8899380 acagatgggtggttatttatttcttctatcttaagaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1568505 37 - 2680843 acagataggcggttatttatttcttctatcttaagaa i cebCap1.NW_016107633v1 C 0 C 0 s canFam3.chr1 4569356 33 - 122678785 agagctatgatg----ctatttcacccatcttaaaaa i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 276964 32 + 643850 agagatatactg----ttatttc-tctcctttaaaaa i dasNov3.JH563638 C 0 I 2782 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e otoGar3.GL873654 5434977 943 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e calJac3.chr22 28512190 2096 + 49145316 I e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I e nomLeu3.chr10 63851802 1301 - 106955855 I a score=282040.000000 s hg38.chr19_GL383574v1_alt 29020 52 + 155864 caac--c-aaaaaaccccactgtactt-----------------------gaac---------tgaatttcctct--------------tttctaatgatt s panTro5.chr19 36087835 52 + 61309027 caac--c-aaaaaaccccactgtactt-----------------------gaac---------tgaatttcctct--------------tttctaatgatt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39839826 52 + 64411610 caac--c-aaaaaaccccactgtactt-----------------------gaac---------tgaatttcctct--------------tttctaatgatt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6257595 52 - 8369475 caac--c-aaaaaaccccactgtactt-----------------------gaac---------tgaatttcctct--------------tttctaatgatt i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30161154 53 + 53671032 caac--caaaaaaactccactgtactt-----------------------gaac---------tgcatttcctct--------------tttctaacgatt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34614027 53 + 59248254 caac--caaaaaaactccactgtactt-----------------------gaac---------tgcatttcctct--------------tttctaacgatt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4482121 53 - 13342542 caac--caaaaaaactccactgtactt-----------------------gaac---------tgcatttcctct--------------tttctaacaatt i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29220483 53 + 50890351 caac--caaaaaaactccactgtactt-----------------------gaac---------tgcatttcctct--------------tttctaacgatt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 833959 53 - 2385121 caac--caaaaaaactccactgtactt-----------------------gaac---------tgcatttcctct--------------tttctaacgatt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2279733 53 + 4274983 caac--caaaaaaactccactgtactt-----------------------gaac---------tgcatttcctct--------------tttctaacgatt i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5355034 52 + 8899380 caac--c-aaaaaaccccactgtactt-----------------------gaac---------tgcatttcctct--------------tttctaaggatt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1568542 52 - 2680843 caac--c-aaaaaaccccactgtactt-----------------------gaac---------tgcatttcctct--------------tttctaaggatt i cebCap1.NW_016107633v1 C 0 C 0 s canFam3.chr1 4569389 101 - 122678785 tagcaacaagaaaataccactactctttttgtgtctgtgggggggggggggaacactactacttttatttttttttatttaattttatatttttaaagatt i canFam3.chr1 C 0 I 186 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 276996 2782 + 643850 I e otoGar3.GL873654 5434977 943 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e calJac3.chr22 28512190 2096 + 49145316 I e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I e nomLeu3.chr10 63851802 1301 - 106955855 I a score=2086702.000000 s hg38.chr19_GL383574v1_alt 29072 366 + 155864 accccatttctatccttccctttatagcgaaaccccttgaagaagttgtctacaccactggtgttcattcatttttgagccctgtttactaaggtttttattcctacatatgaagttttcttatcaaaattaccaaagatttccatgttaccaaatccagtagttagttcttagtctcattctacttcaccagtcagcattacgtggtacagttagtctgttctctgtgaagcattttcttaacttgatcgtatgccatttttttcctcatatctcactggttacctctcaatctcctt-----ggctga---ttgaacctgtaagccgccaaatgttgggagagctccagggctcagt------------tatctccccttttct s panTro5.chr19 36087887 366 + 61309027 accccacttctatccttcccttcatagcgaaaccccttgaagaagttgtctacaccacttgtgttcattcatttttgagccctgtttactaaggtttttattcctacatatgaagttttcttatcaaaattaccaaagatttccatgttaccaaatccagtagttagttcttagtctcattctacttcaccagtcagcattacgtggtacagttagtctgttctctgtgaagcattttcttaacttgatcgtatgccatttttttcctcatatctcactggttacctctcaatctcctt-----ggctga---ttgaacttgtaagccgccaaatgttgggagagctccagggctcagt------------tatctccccttttct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39839878 366 + 64411610 accccatttctatccttccctttatagcgaaaccccttgaagaagttgtctacaccacttgtgttcattcatttttgagccctgtttactaaggtttttattcctacatatgaagttttcttatcaaaattaccaaagatttccatgttaccaaatccagtagttagttcttagtctcattctacttcaccagtcagcattacatggtacagttagtctgttctctgtgaagcattttcttaacttgatcgtatgccatttttttcctcatatctcactggttacctctcaatctcctt-----ggctga---ttgaacttgtaagccgccaaatgttgggcgagctccagggctcagt------------tatctccccttttct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6257647 364 - 8369475 accccatttctatcctt-cctttatagcgaaaccccttgaagaagctgtctacaccacttgtgttcattcatttttgagccctgtttactaaggtttttattcctacatatgaagttttcttatcaaaattaccaaagatttccatgttaccaaatccaatagtcagttc-tagtctcattctacttcaccagtcagcattacgtggtacagttagtctgttctctgtgaagcattttcttaacttgatcgtatgccatttttttcctcatatctcactggttacctctccatctcctt-----ggctga---ttgaacttgtaagccgccaaatgttgggagagctccagggctcagt------------tatctccccttttct i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30161207 367 + 53671032 gccccatttctatccttccctttataacaaaactcctt---gaagttgtctacaccactggtgttcattcatttctgagccctctttactaaggtttttattcctacatatgaagttttcttatcagagttaccaaagacttccatgttgccaaatccagtagtcagttcttggtctcattctacttcaccagtcagcattacatggcacaattgctctgtgctctgtgaagcattttcttcacttgatcgtatgccatttttttcctcatatctcactggttacctctcaatctcctatgttgtgttga---ttcaactcggaagccgccaaatgtt-ggagagctccagggctcagt------------tacctccccttttct i rheMac8.chr19 C 0 I 2 s macFas5.chr19 34614080 367 + 59248254 gccccatttctatccttccctttataacaaaactcctt---gaagttgtctacaccactggtgttcattcatttctgagccctctttactaaggtttttattcctacatatgaagttttcttatcagagttaccaaagacttccatgttgccaaatccagtagtcagttcttggtctcattctacttcaccagtcagcattacatggcacaattgctctgtgctctgtgaagcattttcttcacttgatcgtatgccatttttttcctcatatctcactggttacctctcaatctcctatgttgtgttga---ttcaactcggaagccgccaaatgtt-ggagagctccagggctcagt------------tacctccccttttct i macFas5.chr19 C 0 I 2 s macNem1.NW_012011689v1 4482174 367 - 13342542 gccccatttctatccttccctttataacaaaactcctt---gaagttgtctacaccactggtgttcattcatttctgagccctctttactaaggtttttattcctacatatgaagttttcttatcagagttaccaaaggcttccatgttgccaaatccagtagtcacttcttggtctcattctacttcaccagtcagcattacatggcacaattgctctgtgctctgtgaagcattttcttcacttgatcgtatgccatttttttcctcatatctcactggttacctctcaatttcctatgttgtgttga---ttcaactcggaagccgccaaatgtt-ggagagctccagggctcagt------------tacctccccttttct i macNem1.NW_012011689v1 C 0 I 2 s chlSab2.chr6 29220536 367 + 50890351 gccccatttctatccttccctttataacaaaactcctt---gaagttgtctacaccactggtgttcattcatttctgagccctctttactaaggtttttattcctacatatgaagttttcttatcagagttaccaaagatttccatgttgccaaatccagtagtcagttcttggtctcattctacttcaccagtcagcattacatggcacaattgctctgtgctctgtgaagcattttcttcacttgatcgtatgccatttttttcctcatatctcactggttacctctcaatctcctttgttgtgttga---ttcaactccgaagccgccaaatgtt-ggagagctccagggctcagt------------tacctccccttttct i chlSab2.chr6 C 0 I 2 s manLeu1.NW_012102454v1 834012 367 - 2385121 gccccatttctgtccttccctttataacaaaactcctt---gaagttgtgtacaccactggtgttcattcatttctgagccctctttactaaggtttttattcctacatgtgaagttttcttatcaaagttaccaaagacttccatgttgccaaatccagtagtcagttcttggtctcattctacttcaccagtcagcattacatggcacaattgctctgtgctctgtgaagcattttcttcacttgatcgtatgccatttttttcctcatatctcactggttacctctcaatctcctatgttgtgttga---ttcaactcggaagccgccaaatgtt-ggagagctccagggctcagt------------tacctccccttttct i manLeu1.NW_012102454v1 C 0 I 2 s colAng1.NW_012111697v1 2279786 362 + 4274983 gccccatttctatccttccctttataacaaaactcctt---gaagttgtctacaccactggtgttcattcatttctgagccctctttactaaggtttttattcctacatatgaagttttcttatcaaagttaccaaagacttccatgttgccaaatccagtagtcagttcctagtctcattctacttcaccagtcagcattacatggcacaattgctctgtgctctgtgaagcattttcttcacttgatcgtatgccatttttttcctcatatctcactggttacctctcaatctcctt-----tgtcga---ttcaactcgtaagccaccaaatgtt-ggagagctccagggctcaat------------tacctccccttttct i colAng1.NW_012111697v1 C 0 I 2 s saiBol1.JH378197 5355086 362 + 8899380 accccatttctatcctcccctttatagcaaaactccttgaagaagtggaaga-accacttgtgttcattcatttttgagccctctttactaaggtttttattcctgcatatgaagttttcttatcaaagttaccaaagacttccatgttgtcaaatccagtagtcggttcttagtctcattctacattaccagtcaacattacatggcacaaatgctctgttctctctgaagcgttttcttcacttgatcttatgctgttttttccctcgtatctcactggtcacctctcagtctcctt-----tgttga---ttcaactcctaagccgccaaatgtt-ggagagcttcagggctgagt------------tccctcccctttt-- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1568594 359 - 2680843 gccccatttctatccttccctttatagcaaaa---cttgaagaagtggaaga-accacttgtgttcattcatttttgagccctctttactaaggtttttattgctaccttaaaagttttcttgtcaaagttaccaaagacttccatgttgccaaatccagtagtcagttcttagtctcattctgcatcaccagtcagcgtcacatggcacagttgctctgttctctctgaagcgttttcttcacttgatcttatgccgtttttttcctcagatctcactggtcacctctcagtctcctt-----tgttga---ttcaactcctaagccgccaaatgtt-ggagagcttcagggctgagt------------tccctcccctttt-- i cebCap1.NW_016107633v1 C 0 C 0 s canFam3.chr1 4569676 371 - 122678785 accccatttctatccttccctgtacaccaaaactccttgaaggaattgtccataccacttat----attactttttgaactcagtttatttaggtttttatttgcacagatg--gcaaactaaacaggatcaccagagacttctgtgatgctaaagccagtggttggttcttatcctcagtcggcttgaccagtcaccaatatatggcacagttgggctgttct---taaaatacttccttcacttgactccatcctggttttccccatttacttagctggttacatctcagtctcttt-----tgttgattcttcaactcttaaacctccaaatatt-ggcaagctctaggatttcattctgtttctgtgtgtcttcactttttt i canFam3.chr1 I 186 I 173 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 276996 2782 + 643850 I e otoGar3.GL873654 5434977 943 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e calJac3.chr22 28512190 2096 + 49145316 I e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I e nomLeu3.chr10 63851802 1301 - 106955855 I a score=219334.000000 s hg38.chr19_GL383574v1_alt 29438 40 + 155864 ctctgtctgttaaca------tttatttaatcatctgcattctttt--- s panTro5.chr19 36088253 40 + 61309027 ctctgtctgttagca------tttatttaatcatctgcattctttt--- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39840244 40 + 64411610 ctctgtctgttagca------tttatttaatcatctgcattctttt--- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6258011 39 - 8369475 ctctgtctgttagca------tttatttaatcatctgca-tctttt--- i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30161576 40 + 53671032 ctctgtctgttagca------tttgtttagtcatctgcattctttt--- i rheMac8.chr19 I 2 C 0 s macFas5.chr19 34614449 40 + 59248254 ctctgtctgttagca------tttgtttagtcatctgcattctttt--- i macFas5.chr19 I 2 C 0 s macNem1.NW_012011689v1 4482543 40 - 13342542 ctctgtctgttagca------tttgtttagtcatctgcattctttt--- i macNem1.NW_012011689v1 I 2 C 0 s chlSab2.chr6 29220905 40 + 50890351 ctctgtctgttagca------tttgtttagtcatctgcgttctttt--- i chlSab2.chr6 I 2 C 0 s manLeu1.NW_012102454v1 834381 40 - 2385121 ctctgtctgttagca------tttgtttagtcatctgcattctttt--- i manLeu1.NW_012102454v1 I 2 C 0 s colAng1.NW_012111697v1 2280150 40 + 4274983 ctctgtctgttagca------tttatttagtcatctgcattctttt--- i colAng1.NW_012111697v1 I 2 C 0 s saiBol1.JH378197 5355448 40 + 8899380 ttctctctgttaaca------tttattTAATCATCTGGAttctctt--- i saiBol1.JH378197 C 0 I 5653 s cebCap1.NW_016107633v1 1568953 40 - 2680843 ttctctctgttaaca------tttatttaatcatttggattctttt--- i cebCap1.NW_016107633v1 C 0 C 0 s canFam3.chr1 4570220 49 - 122678785 ctctgtcttttaaaaatttactttgttttaccaccttaccttttctctt i canFam3.chr1 I 173 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 276996 2782 + 643850 I e otoGar3.GL873654 5434977 943 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e calJac3.chr22 28512190 2096 + 49145316 I e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I e nomLeu3.chr10 63851802 1301 - 106955855 I a score=1582954.000000 s hg38.chr19_GL383574v1_alt 29478 317 + 155864 gatgatctcatccatctagttcctggtttcaaatactacctgtatatcactgactcctatctctagcctgaatttctcctctgaactcctgacttgtatatc-cat------tgcctctttaacatctctacttgtagggaagtctgc-tagaa--tctcaattcagcatgctccaaacctgttcctccatcagccttccccatctaatcaaatgacagctc--tattctagttggtaagaccaaaacaccttggagccatccttaattcctctctctctgtctcacctcatgtgatccgaa-cctatcagctctgctttcaaactagat s panTro5.chr19 36088293 316 + 61309027 gatgatctcatccatctagttcctggtttcaaatactacctgtatatcactgactcctatctctagcctgaatttctcctctgaactcctgacttgtatatc-cat------tgcctctttaacatctctacttgtagggaagtctgc-tagaa--tctcaattcagcatgctccaaacctgttcctccatcagccttccccatctaatcaaatgacagttc--tattctagttggtaagacc-aaacaccttggagccatccttaattcctctctctctgtctcacctcatgtgatccgaa-cctatcagctctgctttcaaactagat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39840284 316 + 64411610 gatgatctcatccatctagttcctggtttcaaatactacctgtatatcactgactcctatctctagcctgaatttctcctctgaactcctgacttgtatatc-cat------tgcctctttaacatctctacttgtagggaagtctgc-tagaa--tctcaattcagcatgctccaaacctgttcctccatcagccttccccatctaatcaaatgacagttc--tattctagttggtaagacc-aaacaccttggagccatccttaattcctctctctctgtctcacctcatgtgatccgaa-cctatcagctctgctttcaaactagat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6258050 318 - 8369475 gatgatctcatccatctagttcctggtttcaaatactacctgtatatcactgactcctatctccagcctgaatttctcctctgaactcctgacttgtatatc-cac------tgcctctttaacatctctacttgtagggaagtctgc-tagaatctctcaattcagcatgctccaaacctgttcctccatcagccttccccatctaatcaaataacagctc--tattctagttggtaagacc-aaacaccttggagccatccttaattcctctctctctgtctcacctcatgtgatccgaa-cctatcagctctgctttcaaactagat i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30161616 317 + 53671032 gatgatctcatccatctagttcctggttttaaatactacctgtatatcactgactcctatctctagcctggatttctcctct-aactcctgacttgtatatcacat------tgcctctttaacatctctacttgtagggatgtctgcttagaa--tctcaattcagcatgccctaaacctgttcctccatcagcctttcccatctaatcaattgacagctc--tattctagttggtaagacc-aaacaccttggagccatccttaattcctccctctctctctcacctcatgtgatcctaa-cctatcagctctgctttcaaactaggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34614489 317 + 59248254 gatgatctcatccatctagttcctggttttaaatactacctgtatatcactgactcctatctctagcctggatttctcctct-aactcctgacttgtatatcacat------tgcctctttaacatctctacttgtagggatgtctgcttagaa--tctcaattcagcatgccctaaacctgttcctccatcagcctttcccatctaatcaattgacagctc--tattctagttggtaagacc-aaacaccttggagccatccttaattcctccctctctctctcacctcatgtgatcctaa-cctatcagctctgctttcaaactaggt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4482583 317 - 13342542 gatgatctcatccatctagttcctggttttaaatactacctgtatatcactgactcctatctctagcctggatttctcctct-aactcctgacttgtatatcacat------tgcctctttaacatctctacttgtagggatgtctgcttagaa--tctcaattcagcatgccctaaacctgttcctccatcagcctttcccatctaatcaattgacagctc--tattctagttggtaagacc-aaacaccttggagccatccttaattcctccctctctctctcacctcatgtgatcctaa-cctatcagctctgctttcaaactaggt i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29220945 317 + 50890351 gatgatctcatccatctagttcctggttttaaatactacctgtatatcattgactcctatctctagcctggatttctcctct-aactcctgacttgtatatcacat------tgcctctttaacatctctacttgtagggatgtctgcttagaa--tctcaattcagcatcccctaaacctgttcctccatcagcctttcccatctaatcaattgacagctc--tattctagttggtaagacc-aaacaccttggagccatccttaattcctccctctctctctcacctcatgtgatcctaa-cctatcagctctgctttcaaactaggt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 834421 317 - 2385121 gatgatctcatccatttagttcctggttttaaatactacctgtatatcactgactcctatctctagcctggatttctcctct-aactcctgacttgtatatcacat------tgcctctttaacatctctacttgtagggatgtctgcttagaa--tctcaattcagcatgccctaaacctgttcctccatcagcctttcccatctaatcaattgacagctc--tattctagttggtaagacc-aaacaccttggagccatccttaattcctccctctctctctcacctcatgtgatcctaa-cctatcagctctgctttcaaactaggt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2280190 297 + 4274983 gatgatctcatccatctagttcctggttttaaatactacctgtatatcactgactcctatctctagcctggatttctcctct-aactcctgacttgtgtatcacat------tgcctcttgaacatctctacaagtagggatgtctgcttagaa--tctcagttcagcatgccctaaacctgttcctccatcagcctttcccatctaatcaattgacagctc--tattctagttggtaagacc-gaacaccttggagccatccttaattcctccctctctctctcacctcatgtga---------------------tttcaaactaggt i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1568993 315 - 2680843 gatgatgtcatccatctagttcctggcttcaaatactacctatatatcactgactcctatccctagcctggatttctcctctgaactcctgacttctatatcacat------tgcctctttaacatctctacttgtagggttgtctacttagaa--tctcaattcagcatgccc-aaacctgttcctccaccagtcttccccgtctaataaaatgacaactc--tattctagttggtaagatc-aaacaccttggagccatctttaattcct--ctctctgtctcacctcatgtgatctgaa-cctatcagctctgctttcaaactaggt i cebCap1.NW_016107633v1 C 0 C 0 s canFam3.chr1 4570269 296 - 122678785 gataacctcatgc----agttcctggctttgaatactctccgtacattactgattcctatctccaacttcaacctcctctttgaactcctggcttgtaaacc-caccttgtatgcctcct-aacaccaccacctgcagagatgtttagtaggta--tctca-------------catacctgtt------------ttatccatctaactgaatgacagttcatccttgtagttggtaagacc-aaaaacctttgagtcatgcttaattcttctgttcttcttacacctcatggatttctgatcctatcacctctgttttcaaaatatat i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 276996 2782 + 643850 I e otoGar3.GL873654 5434977 943 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28512190 2096 + 49145316 I e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I e nomLeu3.chr10 63851802 1301 - 106955855 I a score=1104775.000000 s hg38.chr19_GL383574v1_alt 29795 187 + 155864 gcagaatttgacc----tctgaccacccctactaccctggtccattatctctcacTAGTCTATTCAGAGatactcagattcctgtttcttgtttccaatattgacctctcagttgattctttctcctcctcccaattttacttgagtgaatctttgtaattaaaaaa-taaaatatatgggaaatg--taggtg s panTro5.chr19 36088609 187 + 61309027 gcagaatttgacc----tctgaccacccctactaccctggtccattatctctcacTAGTCCATTCAGAGatactcagattcctgtttcttgtttccaatattgacctctcagttgattctttctcctcctcccaattttacttgagtgaatctttgtaattaaaaaa-taaaatacatggaaaatg--taggtg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39840600 187 + 64411610 gcagaatttgacc----tctgaccacccctactaccctggtccattatctctcacTAGTCCATTCAGAGatactcagattcctgtttcttgtttccaatattgacctctcagttgattctttctcctcctcccaattttacttgagtgaatctttgtaattaaaaaa-taaaatacatggaaaatg--taggtg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6258368 187 - 8369475 gcagaatttgacc----tctgaccacccctactaccctggtccattatctctcacTAGTCTATTCAGAGatactcagattcctgtttcttgtttccaatattgacctctcagttgattctttctcctcctcccaattttacttgagtgaatctttgtaattaaaaaa-taaaatacatggaaaatg--taggtg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63853103 187 - 106955855 GCAGAATTTGACC----TCTGACCACCCCTACTACCCTGGTCCATTATCTCTCACTAGCCTATTCAGAGatactcagattcctgtttcttgtttccaatattgacctctcagttgattctttctactcctcccaattttacttgagtgaatctttgtaattaaaaaa-taaaacacatggaaaatg--taggtg i nomLeu3.chr10 I 1301 C 0 s rheMac8.chr19 30161933 187 + 53671032 gcagaatttgacc----tctgaccacccctactaccatggtccattatctctcactagtctattcagagatcctcagattcctgtttcttgtttccagtatgtacctctcagttgattctTTCCACTCCTCCCAATTTTACTTGAGTGGATCTTGGTAATTAAAAAA-TAAAATACATGGAAAAGG--TAGGTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34614806 187 + 59248254 gcagaatttgacc----tctgaccacccctactaccatggtccattatctctcactagtctattcagagatcctcagattcctgtttcttgtttccagtatgtacctctcagttgattctTTCCACTCCTCCCAATTTTACTTGAGTGGATCTTTGTAATTAAAAAA-TAAAATACATGGAAAAGG--TAGTTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4482900 187 - 13342542 gcagaatttgacc----tctgaccacccctactaccatggtccattatctctcacTAGTCTATTCAGAGATCCTCAGATTCCTGTTTCTTGTTTCCAGTATGTACCTCTCAGTTGATTCTTTCCACTCCTCCCAATTTTACTTGAGTGGATCTTTGTAATTAAAAAA-TAAAATACATGGAAAAGG--TAGGTG i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29221262 187 + 50890351 gcagaatttgacc----tctgaccacccctactaccgtggtccattatctctcacTAATCTATTCAGAGATCCTCAGATTCCTGTTTCTTGTTTCCAGTATGTACCTCTCAGTTGATTCTTTCCACTCCTCCCAATTTTACTTGAGTGGATCTTTGTAATTAAAAAA-TAAAATACATGGAAAAGG--TAGGTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 834738 187 - 2385121 gcagaatttgacc----tctgaccacccctactaccatggtccattatctctcactagtctattcagagatcctcagattcctgtttcttgtttccagtatgtacctctcagttgattctTTCCACTCCTCCCAATTTTACTTGAGTGGATCTTTGTAATTAAAAAA-TAAAATACATGGAAAAGA--TAGGTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2280487 187 + 4274983 gcagaatttgacc----tctgaccacccctaataccgtggtccattatctctcactagtctattcagagatcctcagattcctgtttcttgtttccagtatgtacctctcagttgattctTTCCACTCCTCCCAATTTTACTTGAGTGGATCTTTGTAATTAAAAAA-TAAAATACATGGAAAAGG--TAGGTG i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1569308 186 - 2680843 gtagaatttgacc----tctcatcacccctactacca-agtccattatctctcactagtctg-tcagagatactcagattcctgtttcttatttccaatattgacctctcagttgattctTTCCAATGCTCCCAATTTTTCTTAAGTGGATCTTTGTAATTAAAAAAGTAAAATACCTGGAAAATG--TAGATG i cebCap1.NW_016107633v1 C 0 C 0 s canFam3.chr1 4570565 183 - 122678785 ccaaaatttgaccacctACTGGCCTGCTGCTCTCCTCTGATTTACTGTCTCTTTCCAGACTTTTCAAAGA--CTCAGGCCCTCAT------ATTTCAGTGTTGGCCTCTTACTTGATTCTTTTCAC--CTCCCAGTTGTGTTTGAGCGCTTCTTTACCATTAAAAAA-AAAAAACCAATAgggatgcctaggtg i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 276996 2782 + 643850 I e otoGar3.GL873654 5434977 943 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28512190 2096 + 49145316 I e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I a score=1375235.000000 s hg38.chr19_GL383574v1_alt 29982 236 + 155864 acaaa--ttttcttagtgaacctatgttttcttg--tgcttgactggtt----------ggttggctatgtatttccaaattaagagtcttttttctgtggaactttgaagtt-actgctttttgttcttctaatattctggggttgctgatgccagtctgactctcagtcacttttctctctgg-aagcttttatttagaattctctattcctggaattcacaaatgtgatcaca-ctggt---------------ttgttg-ttgtt s panTro5.chr19 36088796 251 + 61309027 acaaa--ttttcttagtgaacctatgttttcttg--tgcttgactggtt----------ggttggctatgtatttccaaattaagagtcttttttctgtggaactttgaagtt-actgctttttgttcttctaatattctggggttgctgatgccagtctgactctcagtcacttttctctctgg-aagcttttatttagaattctctattcctggaattcacaaatgtgatcaca-ctggtttgttgttgttgttgttgttg-ttgtt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39840787 248 + 64411610 acaaa--ttttcttagtgaacctatgttttcttg--tgcttgactggtt----------ggttggctatgtatttccaaattaagagtcttttttctgtggaactttgaagtt-actgctttttgttcttctaatattctggggttgctgatgccagtctgactctcagtcacttttctctctgg-aagcttttatttagaattctctattcctggaattcacaaatgtgatcaCA-CTGGT---ttgttgttgttgttgttg-ttgtt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6258555 245 - 8369475 acaaa--ttttcttagtgaacctatgttttcttg--tgcttgactggtt----------ggttggctatgtatttccaaattaagagtcttttttctgtggaactttgaagtt-actgctttttgttcttctaatattctggggttgctgatgccagtctgactctcagtcacttttctctctgg-aagcttttatttagaattctctattcctggaattcacaaatgtgatcaTA-CTGGT------ttgttgttgttgttg-ttgtt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63853290 245 - 106955855 acaaa--ttttcttagtgaacctatgttttcttgattgcttgactggtt----------ggttggctatatatttccaaattaagagtctttattctacagaactttgaaatt-actgctttttg---ttctaatattctggggttgctgatgccagtctgattctcagtcacttttctctctgg-aagcttttatttagaattctgtattcctggaattcacaaatgtgatcaCA-CTGGT------ttgttgttgttgttgtttgtt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30162120 250 + 53671032 ACAAA--TCTTCTTAGTGAACCTATGTTTTCTTGAttgcttgactggtt----------ggttggctatatatttccaaattaagagtcttttttctatagaactttgaagtt-actgctttttgttcttctgatatactggggttggtggtgccagtctgattctcagtcacttttctctctgg-aagcttttatttcgaattctctgttcctggaattcacaaatgtgaccaCA-CTGGT---ttgttgttgttgttgttg-ttgtt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34614993 250 + 59248254 ACAAA--TCTTCTTAGTGAACCTATGTTTTCTTGAttgcttgactggtt----------ggttggctatatatttccaaattaagagtcttttttctatagaactttgaagtt-actgctttttgttcttctgatatactggggttggtggtgccagtctgattctcagtcacttttctctctgg-aagcttttatttcgaattctctgttcctggaattcacaaatgtgaccaCA-CTGGT---ttgttgttgttgttgttg-ttgtt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4483087 247 - 13342542 ACAAA--TCTTCTTAGTGAACCTATGTTTTCTTGAttgcttgactggtt----------ggttggctatatatttccaaattaagagtcttttttctatagaactttgaagtt-actgctttttgttcttctgatatactggggttggtggtgccagtctgattctcagtcacttttctctctgg-aagcttttatttcgaattctctgttcctggaattcacaaatgtgaccaCA-CTGGt------ttgttgttgttgttg-ttgtt i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29221449 247 + 50890351 ACAAA--TCTTCTTAGTGAACCTATGTTTTCTTGAttgcttgactggtt----------ggttggctatatatttccaaattaagagtcttttttatatagaattttgaagtt-actgctttttgttcttctgatatactggggttgctggtgccagtctgattctcagtcacttttctctctgg-aagcttttattttgaattctctgttcctggaattcacaaatgtgaccaCA-CTGGt------ttgttgttgttgtcg-ttgtt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 834925 247 - 2385121 ACAAA--TCTTCTTAGTGAACCTATGTTTTCTTGAttgcttgactggtt----------ggttggctatatatttccaaattaagggtattttttctatagaactttgaagtt-actgctttttgttcttctaatatactggggttgctggtgccagtctgattctcagtcacttttctctctgg-aagcttttatttcgaattctctgttcctggaattcacaaatgtgaccaCA-Ctggt------ttgttgttgttgtcg-ttgtt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2280674 250 + 4274983 ACAAA--TCTTCTTAGTGAACCTATGTTTTCTTGATTGcttgactggtt----------ggttggctgtatatttccaaattaagagtcttttttctattgaactttgacgtt-actgctttttgttcttctgatatactggggttgctgatgccagtctgattctcagtcacttttctctctgg-aagcttttatttagaattctctgttcctggaattcacaaatgtgaccaCA-CTGAT---ttgttgttgttgttgtca-ttgtt i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1569494 232 - 2680843 ACAAATTTTTTTTTAGTGAACGTATGTT---TTGATTGCTTGATTGGtt----------ggttggctatatgtttccaaatgaagtct-tttttcctgtaaaactttgaagttaactgctttgtattcttctgatattctgaggttgctgatgccagtctgattctcagtcacttttctctctgg-aagctttta----gaattctctgttcct-gaattcacaaatgtaaccaca-ctggt------ttgttgttgtt---------- i cebCap1.NW_016107633v1 C 0 I 25 s otoGar3.GL873654 5435920 227 + 5549422 ACAGA--TTTTCTTAGTGAACTTATGTTTTCTTAACTACTCGAC----T----------GGTTGGCCATATCGTGTGAGATTAAGAATCTTGTTTCTTTAGAACTCTAATGTT-ACTGCTTTGTTGTCCTCTAACATTCT---GTTGGTGTTGTGAGTC-GGTTCTCACTCACttttctctctgg-aagttttta----gaattctgtactcctggaattcacaaatgtgaccaaattttgt------ttactgttgtt---------- i otoGar3.GL873654 I 943 C 0 s canFam3.chr1 4570748 199 - 122678785 ----g--cttagttggttaa---gtgtctgctta--tggct--ctggtcatgatcccagggtcctccaattgaggcccgcttcaagctctatgctcagtggga-----agcct-gcttctccctctccctct------------------------gcctgctgctc--cccctcctctctctgacaaataaataaataaaa--------tctttaaaataaaAAAAAATATAAAT-Ctttt------ttttttttttt---------- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 276996 2782 + 643850 I e mm10.chr7 111059727 1324 - 145441459 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28512190 2096 + 49145316 I e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I a score=86327.000000 s hg38.chr19_GL383574v1_alt 30218 18 + 155864 tgtttgttttttggtttg s panTro5.chr19 36089047 18 + 61309027 tgtttgttttttggtttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841035 18 + 64411610 tgtttgttttttggtttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6258800 18 - 8369475 tgtttgttttttggtttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63853535 18 - 106955855 tgtttgtttttTGGTTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30162370 18 + 53671032 tgtttgttttttggtttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34615243 18 + 59248254 tgtttgttttttggtttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4483334 17 - 13342542 tgtttgtttttt-gtttg i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29221696 18 + 50890351 tgtttgttttttggtttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 835172 15 - 2385121 tgt---ttttttggtttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2280924 18 + 4274983 tgtttgttttttggtttg i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4570947 18 - 122678785 tttttttttttttaattg i canFam3.chr1 C 0 I 78 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 276996 2782 + 643850 I e otoGar3.GL873654 5436147 0 + 5549422 C e mm10.chr7 111059727 1324 - 145441459 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e cebCap1.NW_016107633v1 1569726 25 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28512190 2096 + 49145316 I e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I a score=59472.000000 s hg38.chr19_GL383574v1_alt 30236 12 + 155864 gtttgatttttc s panTro5.chr19 36089065 12 + 61309027 gtttgatttttc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841053 12 + 64411610 gtttgattttTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6258818 12 - 8369475 gtttGATTTTTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63853553 12 - 106955855 GTTTGATTTTTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30162388 12 + 53671032 gtttggtttttC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34615261 12 + 59248254 gtttggtttttC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4483351 12 - 13342542 gtttggtttttC i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29221714 12 + 50890351 gtttggtttttC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 835187 12 - 2385121 gtttggtttttC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2280942 12 + 4274983 gtttggtttttc i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5436147 5 + 5549422 -------tcttc i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 276996 2782 + 643850 I e mm10.chr7 111059727 1324 - 145441459 I e canFam3.chr1 4570965 78 - 122678785 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e cebCap1.NW_016107633v1 1569726 25 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28512190 2096 + 49145316 I e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I a score=230746.000000 s hg38.chr19_GL383574v1_alt 30248 34 + 155864 ctctgagtgtttctctgtggaccttgtgaatctg s panTro5.chr19 36089077 34 + 61309027 ctctgagtgtttctctgtggaccttgtgaatctg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841065 34 + 64411610 CTCTGAGTGTTTCTCTGTGGACCTCGTGAATCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6258830 34 - 8369475 CTCTGAGTGTTTCTCTGTGGACCTTGTGAATCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63853565 32 - 106955855 CTCTGAGTGTTTCTC--TGGACCTTGTGAATCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30162400 34 + 53671032 CTCTGAGTGTTTCTCTGTGGACCTTGTGAATCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34615273 34 + 59248254 CTCTGAGTGTTTCTCTGTGGACCTTGTGAATCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4483363 34 - 13342542 CTCTGAGTGTTTCTCTGTGGACCTTGTGAATCTG i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29221726 34 + 50890351 CTCTGAGTGTTTCTCTGTGGACCTTGTGAATCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 835199 34 - 2385121 CTCTGAGTGTTTCTCTGTGGACCTTGTGAATCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2280954 34 + 4274983 ctctgagtgtttCTCAGTGGACCTTGTGAATCTG i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1569751 34 - 2680843 ctttgagtgtttctctgtggaccttgtgaatctg i cebCap1.NW_016107633v1 I 25 C 0 s otoGar3.GL873654 5436152 32 + 5549422 --ctgagtttttctctgtgggccttatgaatctg i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 276996 2782 + 643850 I e mm10.chr7 111059727 1324 - 145441459 I e canFam3.chr1 4570965 78 - 122678785 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28512190 2096 + 49145316 I e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I a score=21645.000000 s hg38.chr19_GL383574v1_alt 30282 7 + 155864 -------------------aagagtc s panTro5.chr19 36089111 7 + 61309027 -------------------aagagtc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841099 7 + 64411610 -------------------AAGAGTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6258864 7 - 8369475 -------------------AAGAGTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63853597 7 - 106955855 -------------------AAGAGTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30162434 7 + 53671032 -------------------AAGAGTC i rheMac8.chr19 C 0 I 17 s macFas5.chr19 34615307 7 + 59248254 -------------------AAGAGTC i macFas5.chr19 C 0 I 17 s macNem1.NW_012011689v1 4483397 7 - 13342542 -------------------AAGAGTC i macNem1.NW_012011689v1 C 0 I 17 s manLeu1.NW_012102454v1 835233 7 - 2385121 -------------------AAGAGTC i manLeu1.NW_012102454v1 C 0 I 17 s otoGar3.GL873654 5436184 26 + 5549422 aacactAAAATTTCTTTTAAAAATTC i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 276996 2782 + 643850 I e mm10.chr7 111059727 1324 - 145441459 I e chlSab2.chr6 29221760 0 + 50890351 C e canFam3.chr1 4570965 78 - 122678785 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e cebCap1.NW_016107633v1 1569785 0 - 2680843 C e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28512190 2096 + 49145316 I e colAng1.NW_012111697v1 2280988 0 + 4274983 C e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I a score=179668.000000 s hg38.chr19_GL383574v1_alt 30289 205 + 155864 AACTCTCggccgggcgcgg----tggctcatgcctgtaatcctaacactttgggaggccaaggc--gggcagatcacaag-gtcaggagattgagaccatcctggctaacatggtgaaacc----------------------ccgtctctactaaaaatac-------------aaaaaaaaaaaaaaaagccaagtgtggtggcaggcacctgtagtcccagctcttagggaggctgaggcagga s panTro5.chr19 36089118 203 + 61309027 AACTCTCggccgggcgcgg----tggcttatgcctgtaatcctaacactttgggaggccaaggc--gggcagatcacaag-gtcaggagattgagaccatcctggctaacatggtgaaacc----------------------ccgtctctactaaaaatac---------------caaaaaaaaaaaaagccaagtgtggtggcaggcacctgtagtcccagctcttagggaggctgaggcagga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841106 204 + 64411610 AACTCTCggccgggcgcgg----tggctcatgcctgtaatcctaacactttgggaggccaaggc--gggcagatcacaag-gtcaggagattgagaccatcctggctaacatggtgaaacc----------------------ccgtctctactaaaaatac--------------caaaaaaaaagaagagccaagtgtggtggcaggcacctgtagtcccagctcttagggaggctgaggcagga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6258871 207 - 8369475 AACTCTCggccgggcgcgg----tggctcatgcctgtaatcctaacactttgggaggccaaggc--gggcggatcacaag-gtcaggagattgagaccatcctggctaacatggtgaaacc----------------------ccgtctctactaaaaatac-----------agaaaaaaaaaaaaaaaagccgagtgtggtggcaggcacctgtagtcccagctcttagggaggctgaggcagga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63853604 211 - 106955855 AACTCTCAgccggatgcgg----tggctcatgtctgtaatcctagcactttgggaggccaaggt--gggcggatcacaag-gtcaggagattgagaccatcctggctaacacggtgaaacc----------------------ccgtctctactaaaaatacaa-------aaaaaaaaaaaaaaaaaaaagccgggtgtggtggcaggcacctatagtcccagctcttagggaggctgaggcagga i nomLeu3.chr10 C 0 C 0 s otoGar3.GL873654 5436210 179 + 5549422 ATTTCTCggctcggcgc----------------ctatggctcaaccagctagggcgccagccac--gtaca---cctagg-gtggcgggttcgaatcccc-----------------agcc----------------------cggacccgccaaacaacaatg-------acggctgcaaccaggaaatagccaggcgttgtggcggacgcctgtggtcccagctacttgagaggcggaggcagga i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4571043 223 - 122678785 gactccctgctgagcagagagcctagcacagggct-cagtcccaccac-tggtgagatcatgacctgagctgaagccaagagtcagaagcttaa--ccaactgagccatccaggtgccACCAGAATCTTTTTCTTTTTTTTTTTtttttttaattaagattttatttattcatgagagaagcagagagaaag--------agaagcaggc--------tccctgc----ggggagcctgatgtagga i canFam3.chr1 I 78 I 284 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 276996 2782 + 643850 I e mm10.chr7 111059727 1324 - 145441459 I e chlSab2.chr6 29221760 0 + 50890351 C e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e cebCap1.NW_016107633v1 1569785 0 - 2680843 C e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28512190 2096 + 49145316 I e colAng1.NW_012111697v1 2280988 0 + 4274983 C e manLeu1.NW_012102454v1 835240 17 - 2385121 I e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I e macNem1.NW_012011689v1 4483404 17 - 13342542 I e macFas5.chr19 34615314 17 + 59248254 I e rheMac8.chr19 30162441 17 + 53671032 I a score=86847.000000 s hg38.chr19_GL383574v1_alt 30494 101 + 155864 gaatg-----------------------gtgtgaacccgggaggcggagcttgcagtgagccaagattataccagtgcactccagcctaagcgacag--tg--agactccatctc----aaaaaaaaaaaaa s panTro5.chr19 36089321 101 + 61309027 gaatg-----------------------gtgtgaacccgctaggcggagcttgcagtgagccgagattataccagtgcactccagtctaagcgacag--tg--agactccatctc----aaaaaaaaaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841310 122 + 64411610 gaatggtgnnnnnnnnnnnnnnnnnnnngtgtgaacccgctaggcggagcttgcagtgagccgagattataccagtgcactccagtctaagcgacag--tg--agactccatctc------aaaaaaaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259078 105 - 8369475 gaatg-----------------------gtgtgaacccgggaggcggagcttgcagtgagccgagattataccagtgcactccagcctaagcgacag--tg--agactccatctcaaaaaaaaaaaaaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63853815 98 - 106955855 gaatg-----------------------gcgtgaacgcgggaggcggagcttgcagtgagccgagactgcaccactgcactccagcctaggttacag--agcaagattccatctc---------aaaaaaaa i nomLeu3.chr10 C 0 C 0 s otoGar3.GL873654 5436389 100 + 5549422 gactc-----------------------gcttgagcccaggagttggaggttgctgtgagctg---taatgccacggcactctacccaggtggacagcttg--aggctctgtctc----aaaaaaaaaaaaa i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 276996 2782 + 643850 I e mm10.chr7 111059727 1324 - 145441459 I e chlSab2.chr6 29221760 0 + 50890351 C e canFam3.chr1 4571266 284 - 122678785 I e aotNan1.NW_018505377v1 315462 2464 - 4471408 I e cebCap1.NW_016107633v1 1569785 0 - 2680843 C e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28512190 2096 + 49145316 I e colAng1.NW_012111697v1 2280988 0 + 4274983 C e manLeu1.NW_012102454v1 835240 17 - 2385121 I e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I e macNem1.NW_012011689v1 4483404 17 - 13342542 I e macFas5.chr19 34615314 17 + 59248254 I e rheMac8.chr19 30162441 17 + 53671032 I a score=40830.000000 s hg38.chr19_GL383574v1_alt 30595 11 + 155864 aaGAGTCAACT s panTro5.chr19 36089422 11 + 61309027 aagagtcaact i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841432 11 + 64411610 aaGAGTCAACT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259183 11 - 8369475 aaGAGTCAACT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63853913 11 - 106955855 aaaaGTCAACT i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29221760 11 + 50890351 AAGAGTCAACT i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2280988 11 + 4274983 AAGAGTCAGCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28514286 11 + 49145316 aagagtcaact i calJac3.chr22 I 2096 C 0 s cebCap1.NW_016107633v1 1569785 11 - 2680843 aagagtcaact i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 317926 11 - 4471408 AAGAGTCAACT i aotNan1.NW_018505377v1 I 2464 C 0 s otoGar3.GL873654 5436489 4 + 5549422 aaaa------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 276996 2782 + 643850 I e mm10.chr7 111059727 1324 - 145441459 I e canFam3.chr1 4571266 284 - 122678785 I e saiBol1.JH378197 5355488 5653 + 8899380 I e manLeu1.NW_012102454v1 835240 17 - 2385121 I e cerAty1.NW_012005268v1 5412355 1865 + 7714307 I e macNem1.NW_012011689v1 4483404 17 - 13342542 I e macFas5.chr19 34615314 17 + 59248254 I e rheMac8.chr19 30162441 17 + 53671032 I a score=427754.000000 s hg38.chr19_GL383574v1_alt 30606 53 + 155864 CTCTTTAAATCTAAGAAATCCATTCATtctctctacctctgacacgccctccc s panTro5.chr19 36089433 53 + 61309027 ctctttaaatctaagaaatccattcattctctctacctctgacacgccctccc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841443 53 + 64411610 CTCTTTAAATCTAAGAAATCCATTCATtctctctacctctgacacgccctccc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259194 53 - 8369475 CTCTTTAAATCTAAGAAATCCATTCATtctctctacctctgacactccctccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63853924 53 - 106955855 CTCTTTAAATCTAAGAAATCCATTCATtctctctacctctgacactcgctccc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30162458 53 + 53671032 CTCTTTAAATCTAAGAAACCCATTCGTTCTCTCTACCTCCGACACTCCCTTCC i rheMac8.chr19 I 17 C 0 s macFas5.chr19 34615331 53 + 59248254 CTCTTTAAATCTAAGAAACCCATTCGTTCTCTCTACCTCCGACACTCCCTTCC i macFas5.chr19 I 17 C 0 s macNem1.NW_012011689v1 4483421 53 - 13342542 CTCTTTAAATCTAAGAAACCCATTCGTTCTCTCTACCTCCGACACTCCCTTCC i macNem1.NW_012011689v1 I 17 C 0 s cerAty1.NW_012005268v1 5414220 53 + 7714307 CTCTTTAAATCTAAGAAATCCATTCGTTCTCTCTACCTCCGACACTCCCTTCC i cerAty1.NW_012005268v1 I 1865 C 0 s chlSab2.chr6 29221771 53 + 50890351 CTCTTTAAATCTAAGAAATCCATTCGTTCTCTCTACCTCCGACACTCCCTTCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 835257 53 - 2385121 CTCTTTAAATCTAAGAAATCCATTCGTTCTCTCTACCTCCGACACTCCCTTCC i manLeu1.NW_012102454v1 I 17 C 0 s colAng1.NW_012111697v1 2280999 53 + 4274983 CTCTTTAAATCTAAGAAACCCGTTCATTCTCTCTACCTCCGACACTCCCTTCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28514297 52 + 49145316 ctctttaaatctaagaagttcattcattgtctctatctctcacactccctcc- i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1569796 52 - 2680843 ctctttaaatctaagaagttcattcattgtctctATCCCTCACACTCCCTCC- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 317937 52 - 4471408 CTCTTTAAATCTAAGAAGTTCATTCATTGTCTCTATCCCTCACACTCCCTCC- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5436493 19 + 5549422 ---------------------aTTCATT---TCTCCCTCTTAC---------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e dasNov3.JH563638 276996 2782 + 643850 I e mm10.chr7 111059727 1324 - 145441459 I e canFam3.chr1 4571266 284 - 122678785 I e saiBol1.JH378197 5355488 5653 + 8899380 I a score=207532.000000 s hg38.chr19_GL383574v1_alt 30659 30 + 155864 tcccctctccccctcctctttctagctcca s panTro5.chr19 36089486 30 + 61309027 tcccctctccccctcctctttctagctccA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841496 30 + 64411610 tcccctctccccctcctctttctagctcca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259247 30 - 8369475 tcccctctccccctcctctttctAGCGCCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63853977 30 - 106955855 tcccctctccccctcctctttctagctcca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30162511 30 + 53671032 TCCCCTCTCCCCCACCTCTTTCTAGTTCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34615384 30 + 59248254 TCCCCTCTCCCCCACCTCTTTCTAGTTCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4483474 30 - 13342542 TCCCCTCTCCCCCACCTCTTTCTAGTTCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5414273 30 + 7714307 TCCCCTCTCCCCTACCTCTTTCTAGTTCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29221824 30 + 50890351 TCCCCTCTCCCCCACCTCTTTCTAGTTCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 835310 30 - 2385121 TCCCCTCTCCCCCACCTCTTTCTAGTTCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2281052 30 + 4274983 TCCCCTCTCCCCCACCTCTTTCTAGTTCTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28514349 24 + 49145316 ------ctcaggctcctctttctagctgtt i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1569848 24 - 2680843 ------CTCCTGCTCCTCTTTCTAGCTGTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 317989 24 - 4471408 ------CTCCCGCTCCTCTTTCTAGCTGTG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5436512 16 + 5549422 --------------TCTTTCTCTGTAGCTG i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 279778 25 + 643850 ttccttgtgttctttctctctttaa----- i dasNov3.JH563638 I 2782 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e mm10.chr7 111059727 1324 - 145441459 I e canFam3.chr1 4571266 284 - 122678785 I e saiBol1.JH378197 5355488 5653 + 8899380 I a score=733139.000000 s hg38.chr19_GL383574v1_alt 30689 81 + 155864 tctcAGA-TA-ATTTCTATCT------TGCCTCCTGCTCCCCAGCCTTGT---TAT-TGTTG-TTTTT-----AATTCCTCATGGATGCG----TTTATCCTC s panTro5.chr19 36089516 81 + 61309027 TCTCAGA-TA-ATTTCTGTCT------TGCCTCCTGCTCCCCAGCCTTGT---TGT-TGTCG-TTTTT-----AATTCCTCATGGATGCG----TTTATCCTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841526 81 + 64411610 tctcAGA-TA-ATTTCTGTCT------TGCCTCCTGCTCCCCAGCCTTGT---TGT-TGTCG-TTTTT-----AATTCCTCATGGATGCG----TTTATCCTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259277 78 - 8369475 TCTCAGA-TA-ATTTCTATCT------TGCCTCCTGCTCCCCAGCCTTGT---TGT-T---G-TTTTT-----AATTCCTCATGGATGCG----TTTATCCTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854007 79 - 106955855 tctcAGA-TA-ATTTCTGTCT------TGCCTCCTACTCCCCAGCCTTGT---TGT-TGT---TTTTT-----AATTCCTCATGGATGCG----TTTATCCTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30162541 83 + 53671032 TCTCAGATTG-ATTTCTATCT------TGTCTTCCATCCTCTAGCCTTGT---TGC-TGTTGTTTTTT-----AATTCCTCATGGATGCG----TTTATCCTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34615414 83 + 59248254 TCTCAGATTG-ATTTCTATCT------TGTCTTCCATCCTCTAGCCTTGT---TGC-TGTTGTTTTTT-----AATTCCTCATGGATGTG----TTTATCCTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4483504 83 - 13342542 TCTCAGATTG-ATTTCTATCT------TGTCTTCCATCCTCTAGCCTTGT---TGC-TGTTGTTTTTT-----AATTCCTCATGGATGCG----TTTATCCTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5414303 82 + 7714307 TCTCAGATTG-ATTTCTATCT------TGTCTTCCACCCTCTAGCCTTGT---TGC-TGTTG-TTTTT-----AATTCCTCATGGATGCG----TTTATCCTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29221854 83 + 50890351 TCTCAGATTG-ATTTCTATCT------TGTCTTCCACTCTCTAGCCTTGT---TGC-TGTTGTTTTTT-----AATTCCTCATGGATGCG----TTTATCCTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 835340 82 - 2385121 TCTCAGATTG-ATTTCTATCT------TGTCTTCCACCCTCTAGCCTTGT---TGC-TGTTG-TTTTT-----AATTCCTCATGGATGCG----TTTATCCTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2281082 83 + 4274983 TCTCAGATTA-ATTTCTATCT------TGTCTTCCACTCCCTAGCCTTGT---TGC-TGTTGTTTTTT-----AATTCCTCATGGATGCG----TTTATCCTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28514373 83 + 49145316 tctcagatTA-ATTTCTTTCT------TGCCTCCCACTCCCCAGCCTTGT---TGC-TATTGTTTTTT-----AATTCTTCATGGATGCG----TGTATCCTC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1569872 84 - 2680843 TCTCAGATTATTTTTCTTTCT------TGCCTCCCACTCCCCAGCCTTGT---TGC-TGTTGTTTTTT-----AATTCTTCATGGATATG----TTTATCCTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 318013 83 - 4471408 TCTCAGATTA-ATTTCTTTCT------TGCCTCCCACTCCCCAGCCTTGT---TGC-TGTTGTTTTTT-----AATTCTTCATGGATGCG----TTTATCCTC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5436528 93 + 5549422 TCTCAGATTA-GTCTGTCTTTTTTCTATTCCTCCCATTCCTCACTCTTGTGTGTGTGTGTTTTTTTCT-----AATTCCTATTGGATGCA----TTTATCCTC i otoGar3.GL873654 C 0 I 3445 s canFam3.chr1 4571550 81 - 122678785 tcttagataa-gcttctgtct------tgt-ttctgttcctcactcatgt---ttt-g-----tttta-----aattcctattggatgcaatattttgtgtgt i canFam3.chr1 I 284 I 3 s dasNov3.JH563638 279803 82 + 643850 -----aatta-gtttctacct------tattttctttttctccccttcct---tac-tctct-tttttgctggaatttttattaggtgca----tatatcctc i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e mm10.chr7 111059727 1324 - 145441459 I e saiBol1.JH378197 5355488 5653 + 8899380 I a score=178117.000000 s hg38.chr19_GL383574v1_alt 30770 25 + 155864 CACC--------CTGCTTTTTCACTCTTATATC s panTro5.chr19 36089597 25 + 61309027 CACC--------CTGCTTTTTCACTCTTATATC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841607 25 + 64411610 CACC--------CTGCTTTTTCACTCTTATATC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259355 25 - 8369475 CACC--------CTGCTTTTTCAGTCTTATATC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854086 25 - 106955855 CCCC--------CTGTTTTTTCACTCTTACATC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30162624 25 + 53671032 CCCC--------CTGCTTTTTCACTCTTATGTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34615497 25 + 59248254 CCCC--------CTGCTTTTTCACTCTTATGTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4483587 25 - 13342542 CCCC--------CTGCTTTTTCACTCTTATGTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5414385 25 + 7714307 CCCC--------CTGCTTTTTCACTCTTATGTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29221937 25 + 50890351 CCCC--------CTGCTTTTTCACTCTTATGTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 835422 25 - 2385121 CCCC--------CTGCTTTTTCACTCTTATGTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2281165 25 + 4274983 CCCC--------CTGCTTTTTCACTCTTATGTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28514456 33 + 49145316 CCCCCGCCCCCACAGCTTTTTCACTCTTATGTC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1569956 33 - 2680843 CCCCGGCCCCCACAGCTTTTTCACTCTCATATC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 318096 33 - 4471408 CCCCTGCCCCCACAGCTTTTTCGCTCTTATATC i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4571634 20 - 122678785 --------tataaaatttttttgctgtt----- i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 279885 21 + 643850 ---------taacttctttttt--tcttatat- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3925240 1000 - 30143674 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e saiBol1.JH378197 5355488 5653 + 8899380 I a score=573345.000000 s hg38.chr19_GL383574v1_alt 30795 48 + 155864 ATATTTTCATA--TCTGTCTCTTGGTTTTATCATTTGG-A-GATTAAAATAT s panTro5.chr19 36089622 48 + 61309027 ATATTTTCATA--TCTGTCTCTTGGTTTTATCATTTGG-A-GATTAAAATAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841632 48 + 64411610 ATATTTTCATA--TCTGTCTCTTGGTTTTATCATTTGG-A-GATTAAAATAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259380 48 - 8369475 ATATTTTCATA--TCTGTCTCTTGGTTTTATCATTTGG-A-GATTAAAATAT i gorGor5.CYUI01015150v1 C 0 I 1 s nomLeu3.chr10 63854111 48 - 106955855 ATATTTTCATA--TCTGTCTCTTGGTTTTATCATTTGG-A-GATTAAAATAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30162649 48 + 53671032 ATATTTTCATA--TCTGACTCTTGGTTTTTTCATTTGG-A-GATTAAAATAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34615522 48 + 59248254 ATATTTTCATA--TCTGACTCTTGGTTTTATCATTTGG-A-GATTAAAATAT i macFas5.chr19 C 0 I 322 s macNem1.NW_012011689v1 4483612 48 - 13342542 ATATTTTCATA--TCTGACTCTTGGTTTTATCATTTGG-A-GATTAAAATAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5414410 48 + 7714307 ATATTTTCATA--TCTGACTCTTGGTTTTATCATTTAG-A-GATTAAAATAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29221962 48 + 50890351 ATATTTTCATA--TCTGACTCTTGGTTTTTTCATTTGG-A-GATTAAAATAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 835447 48 - 2385121 ATATTTTCATA--TCTGACTCTTGGTTTTATCATTTGG-A-GATTAAAATAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2281190 48 + 4274983 ATATTTTTATA--TCTGACTCTTGGTTTTATCATTTGG-A-GATTAAAATAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28514489 48 + 49145316 ACATTTTCATG--TCTGTCTCTTGGTTTTATCATTTGG-A-GATTAAAATAT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1569989 48 - 2680843 ACATTTTCATG--TCTGTCTCTTGGTTTTATCATTTGG-A-GATTAAAATAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 318129 48 - 4471408 ACATTTTCATG--TCTGTCTCTTGGTTTTATCATTTGG-A-GATTAAAGTAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3926240 51 - 30143674 atattttcatatttctgtctcttgtttttgtcatttGGAA-GATTAAAATAT i micMur3.chr22 I 1000 C 0 s canFam3.chr1 4571654 49 - 122678785 atattttcatc--tctgtctcttggttttgttgtttggga-gattAAAATAT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 279906 48 + 643850 ---ttttcatatttttgtctctttgttttactttttgg-aggattAAAATAT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e saiBol1.JH378197 5355488 5653 + 8899380 I a score=41769.000000 s hg38.chr19_GL383574v1_alt 30843 3 + 155864 AAA s panTro5.chr19 36089670 3 + 61309027 AAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841680 3 + 64411610 AAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259429 3 - 8369475 AAA i gorGor5.CYUI01015150v1 I 1 C 0 s nomLeu3.chr10 63854159 3 - 106955855 AAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30162697 3 + 53671032 AAA i rheMac8.chr19 C 0 I 321 s macFas5.chr19 34615892 3 + 59248254 aaa i macFas5.chr19 I 322 C 0 s macNem1.NW_012011689v1 4483660 3 - 13342542 AAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5414458 3 + 7714307 AAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29222010 3 + 50890351 AAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 835495 3 - 2385121 AAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2281238 3 + 4274983 AAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28514537 3 + 49145316 AAA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1570037 3 - 2680843 AAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 318177 3 - 4471408 AAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3926291 3 - 30143674 AAA i micMur3.chr22 C 0 C 0 s canFam3.chr1 4571703 3 - 122678785 AAA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 279954 3 + 643850 AAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e saiBol1.JH378197 5355488 5653 + 8899380 I a score=680162.000000 s hg38.chr19_GL383574v1_alt 30846 54 + 155864 AACAGCCATAAGGAAGAATGCCCAACTGAAAGCAGCTTAGAGAGTCAACATTAA s panTro5.chr19 36089673 54 + 61309027 AACAGCCATAAGGAAGAATGCTCAACTGAAAGCAGCTTAGAGAGTCAACATTAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841683 54 + 64411610 AACAGCCATAAGGAAGAATGCTCAACTGAAAGCAGCTTAGAGAGTCAACATTAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259432 54 - 8369475 AACAGCCATAAGGAAGAATGCCCAACTGAAAGCAGCTTAGAGAGTCAACATTAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854162 54 - 106955855 AACAGCCATAAGGAAGAATGCCCAACTGAAAGCAGCTTAGAGAGTCAACATTAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30163021 54 + 53671032 aaCAGCCATAAGGAAGAATGCCCAACTGAAAGCAGCTTAGAAAGTCAACATTAA i rheMac8.chr19 I 321 C 0 s macFas5.chr19 34615895 54 + 59248254 aaCAGCCATAAGGAAGAATGCCCAACTGAAAGCAGCTTAGAAAGTCAACATTAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4483663 54 - 13342542 AACAGCCATAAGGAAGAATGCCCAACTGAAAGCAGCTTAGAAAGTCAACATTAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5414461 54 + 7714307 AACAGCCATAAGGAAGAATGCCCAACTGAAAGCAGCTTAGAAAGTCAACATTAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29222013 54 + 50890351 AACAGCCATAAGGAAGAATGCCCAACTGAAAGCAGCTTAGAAAGTCAACATTAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 835498 54 - 2385121 AACAGCCATAAGGAAGAATGCCCAACTGAAAGCAGCTTAGAAAGTCAACATTAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2281241 54 + 4274983 AGCAGCCATGAGGAAGAATGCCCAACTGAAAGCAGCTTAGAGAGTCAACATTAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28514540 54 + 49145316 AACAGCCATAAGGAAGAATGCCCAACTGAAAGCATCTTAGAAAGTCAACATTAA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1570040 54 - 2680843 AACAGCCATAAGGAAGAATGCCCAACTGAAAGCAGCTTAGAAAGTCAACATTAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 318180 54 - 4471408 AACAGCCATAAGGAAGAATGCCCAACTGAAAGCAGCTTAGAAAGTCAACATTAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3926294 54 - 30143674 ACCAACCATAAGGAAAAATGCCCAACTGAAAGCAGCTTAAAGAGTCAAGATTAA i micMur3.chr22 C 0 I 1260 s canFam3.chr1 4571706 54 - 122678785 GCCAACTACGAGAAAGAATGTACAACTGAAAGCAGCTTAAAGAGTAAAGATTAA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 279957 51 + 643850 ATCAATCATAAGGAAGAGTACCCAACTGAAAA-AGCTTAG--AGTCAAGATTAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e saiBol1.JH378197 5355488 5653 + 8899380 I a score=976589.000000 s hg38.chr19_GL383574v1_alt 30900 93 + 155864 ATTTAAACCATTgggtaaagatagcaaactggacatgcttttacttttccttcctgttgataaatcctatcaaaactacgtgagagggacttt s panTro5.chr19 36089727 93 + 61309027 ATTTAAACCATTgggtaaagatagcaaactggacatgcttttacttttccttcctgttgataaatcctatcaaaactacgtgagagggacttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841737 93 + 64411610 ATTTAAACCATTgggtaaagatagcaaactggacatgcttttacttttccttcctgttgataaatcctatcaaaactacgtgagagggacttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259486 93 - 8369475 ATTTAAACCATTgggtaaagatagcaaactggacatgcttttacttttccttcctgttgataaatcctatcaaaactatgtgagagggacttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854216 93 - 106955855 ATTTAAACCATTGAGtaaagatagcaaactggacatgcttttacttttccttcctgttgataaatcctattaaaactacatgagagggacttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30163075 93 + 53671032 ATTTAAACCATTgggtaaatatagcaaactggacatgcttttacttttccttcctgttgataaatcctatcaaaactacatgagagggacttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34615949 93 + 59248254 ATTTAAACCATTgggtaaatatagcaaactggacatgcttttacttttccttcctgttgataaatcctatcaaaactacatgagaaggacttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4483717 93 - 13342542 ATTTAAACCATTgggtaaatatagcaaactggacatgcttttacttttccttcctgttgataaatcctatcaaaactacatgagagggacttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5414515 93 + 7714307 ATTTAAACCATTgggtaaatatagcaaactggacatgcttttacttttccttcctgttgataaatcctatcaaaactacatgagagggacttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29222067 93 + 50890351 ATTTAAACCATTgggtaaatatagcaaactggacatgcttttacttttccttcctgttgataaatcctatcaaaactatatgagagggacttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 835552 93 - 2385121 ATTTAAACCATTgggtaaatatagcaaactgaacatgcttttacttttccttcctgttgataaatcctatcaaaactacgtgagagggacttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2281295 93 + 4274983 ATTTAAACCATTgggtaaatatagcaaactggacatgcttttacttttccttcctgttgataaatcctatcaaaactacatgagagggacttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28514594 92 + 49145316 ATTTAAACCGTTGAGTAAAGATACCAAACTGGACATGCTTTTACTTTT-CTTCCTGTTGATAAATCCTGTCAAAACTACATGAGAGTGACttt i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1570094 92 - 2680843 ATTTAAACCGTTGAGTAAAAATACCAAACTGGACATGCTTTTACTTTT-CTTCTTGTTGATAAATCCTATCAAAACTACATGAGAAGGACttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 318234 92 - 4471408 ATTTAAACTGTTGAGTAAAGATACCAAACTGAACATGCTTTTACTTTT-CTTCCTGTTGATAAATCCTATCAAAACTACATCAGAGGGACttt i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4571760 79 - 122678785 ATTTagact--------------gcagattagacaagcttttacttttacttcctgttgataaatcctactaaaactgtgtgtgagggacttt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 280008 90 + 643850 ATTTAGACTGTTAGGTAAAGCTGACAGATTGGACATGTCTTTACTTTC-TATCATGTTGATAAACCTTACTAAAACTACA--AGAGGGTTTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e saiBol1.JH378197 5355488 5653 + 8899380 I a score=7847.000000 s hg38.chr19_GL383574v1_alt 30993 1 + 155864 t s panTro5.chr19 36089820 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841830 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259579 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854309 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30163168 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4483810 1 - 13342542 t i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5414608 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29222160 1 + 50890351 t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 835645 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2281388 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28514686 1 + 49145316 t i calJac3.chr22 C 0 I 1098 s cebCap1.NW_016107633v1 1570186 1 - 2680843 t i cebCap1.NW_016107633v1 C 0 I 4304 s aotNan1.NW_018505377v1 318326 1 - 4471408 t i aotNan1.NW_018505377v1 C 0 I 606 s dasNov3.JH563638 280098 1 + 643850 C i dasNov3.JH563638 C 0 I 36 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e canFam3.chr1 4571839 0 - 122678785 C e saiBol1.JH378197 5355488 5653 + 8899380 I e macFas5.chr19 34616042 0 + 59248254 C a score=30030.000000 s hg38.chr19_GL383574v1_alt 30994 6 + 155864 aaaaaa s panTro5.chr19 36089821 6 + 61309027 aaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841831 6 + 64411610 aaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259580 6 - 8369475 aaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854310 6 - 106955855 aaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30163169 6 + 53671032 aaaaaa i rheMac8.chr19 C 0 I 5 s macNem1.NW_012011689v1 4483811 6 - 13342542 aaaaaa i macNem1.NW_012011689v1 C 0 I 5 s cerAty1.NW_012005268v1 5414609 6 + 7714307 aaaaaa i cerAty1.NW_012005268v1 C 0 I 471 s chlSab2.chr6 29222161 6 + 50890351 aaaaaa i chlSab2.chr6 C 0 I 5 s manLeu1.NW_012102454v1 835646 6 - 2385121 aaaaaa i manLeu1.NW_012102454v1 C 0 I 6513 s colAng1.NW_012111697v1 2281389 6 + 4274983 aaaaaa i colAng1.NW_012111697v1 C 0 I 5 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e dasNov3.JH563638 280099 36 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e canFam3.chr1 4571839 0 - 122678785 C e aotNan1.NW_018505377v1 318327 606 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28514687 1098 + 49145316 I e macFas5.chr19 34616042 0 + 59248254 C a score=134558.000000 s hg38.chr19_GL383574v1_alt 31000 149 + 155864 tacataaacccggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggattacgaggtcaggagttcgagatcagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagcca s panTro5.chr19 36089827 149 + 61309027 tacataaacccggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcaggaggattacgaggtcaggagttcaagatcagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagcca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841837 149 + 64411610 tacataaacccggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggattacgaggtcaggagttcaagatcagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagcca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259586 149 - 8369475 tgcataaacccggccgggcacagtgtctcacgcctgtaatcccagcactttgggaggccgaggcgggcggattatgaggtcaggagttcgagatcagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854316 149 - 106955855 tacataaacgtggccgggtgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggattacgaggtcaggagttcgagatcagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccg i nomLeu3.chr10 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e dasNov3.JH563638 280099 36 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e chlSab2.chr6 29222167 5 + 50890351 I e canFam3.chr1 4571839 0 - 122678785 C e aotNan1.NW_018505377v1 318327 606 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28514687 1098 + 49145316 I e colAng1.NW_012111697v1 2281395 5 + 4274983 I e manLeu1.NW_012102454v1 835652 6513 - 2385121 I e cerAty1.NW_012005268v1 5414615 471 + 7714307 I e macNem1.NW_012011689v1 4483817 5 - 13342542 I e macFas5.chr19 34616042 0 + 59248254 C e rheMac8.chr19 30163175 5 + 53671032 I a score=14202.000000 s hg38.chr19_GL383574v1_alt 31149 15 + 155864 gtcgtggtgttgtgc s panTro5.chr19 36089976 15 + 61309027 gttgtggtggtgtgc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39841986 15 + 64411610 gtcgtggtggtgtgc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259735 15 - 8369475 gtcgtggtggtgtgc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854465 15 - 106955855 ggcgtggtggtgtgc i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 4571839 15 - 122678785 gttgttgttttaggc i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e dasNov3.JH563638 280099 36 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e chlSab2.chr6 29222167 5 + 50890351 I e aotNan1.NW_018505377v1 318327 606 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28514687 1098 + 49145316 I e colAng1.NW_012111697v1 2281395 5 + 4274983 I e manLeu1.NW_012102454v1 835652 6513 - 2385121 I e cerAty1.NW_012005268v1 5414615 471 + 7714307 I e macNem1.NW_012011689v1 4483817 5 - 13342542 I e macFas5.chr19 34616042 0 + 59248254 C e rheMac8.chr19 30163175 5 + 53671032 I a score=104006.000000 s hg38.chr19_GL383574v1_alt 31164 111 + 155864 acctgtaatcccagctacttgggaagctggggcaggagaatcgcttgaacccaggaggcagaggttacagtgagctgagatcgtgctattgcactccagtctgggtgacag s panTro5.chr19 36089991 111 + 61309027 acctgtaatcccagctacttgggaggctggggcaggagaatcgcttgaacccaggaggcagaggttacagtgagctgagatcgtgctattgcactccagtctgggtgacag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842001 111 + 64411610 acctgtaatcccagctacttgggaggctggggcaggagaatcgcttgaacccaggaggcagaggttacagtgagctgagatcgtgctattgcactccagtctgggtgacag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259750 111 - 8369475 atctgtaatcccagctacttgggaggctggggcaggagaatcgcttgaacccaggaggcagaggttacagtgagctgagatcgtgctgttgcactccagtctgggtgacag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854480 111 - 106955855 acctgtaatcccagctacttgggaggctggggcaggagaatcgcttaaacctaggaggcagaggttacagtgagctgagatcgtgctattgcactccagtctgggtgacag i nomLeu3.chr10 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e dasNov3.JH563638 280099 36 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e chlSab2.chr6 29222167 5 + 50890351 I e canFam3.chr1 4571854 0 - 122678785 C e aotNan1.NW_018505377v1 318327 606 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28514687 1098 + 49145316 I e colAng1.NW_012111697v1 2281395 5 + 4274983 I e manLeu1.NW_012102454v1 835652 6513 - 2385121 I e cerAty1.NW_012005268v1 5414615 471 + 7714307 I e macNem1.NW_012011689v1 4483817 5 - 13342542 I e macFas5.chr19 34616042 0 + 59248254 C e rheMac8.chr19 30163175 5 + 53671032 I a score=16423.000000 s hg38.chr19_GL383574v1_alt 31275 24 + 155864 agcgagttcgtctcaaaaaaaaaa s panTro5.chr19 36090102 24 + 61309027 agcgagttcgtctcaaaaaaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842112 23 + 64411610 agcgagttcgtct-acaaaaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259861 22 - 8369475 agcgagttcgtctcaaaaaaaa-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854591 24 - 106955855 agcgagttcgtctcaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s dasNov3.JH563638 280135 17 + 643850 agagagttatttttaag------- i dasNov3.JH563638 I 36 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e chlSab2.chr6 29222167 5 + 50890351 I e canFam3.chr1 4571854 0 - 122678785 C e aotNan1.NW_018505377v1 318327 606 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28514687 1098 + 49145316 I e colAng1.NW_012111697v1 2281395 5 + 4274983 I e manLeu1.NW_012102454v1 835652 6513 - 2385121 I e cerAty1.NW_012005268v1 5414615 471 + 7714307 I e macNem1.NW_012011689v1 4483817 5 - 13342542 I e macFas5.chr19 34616042 0 + 59248254 C e rheMac8.chr19 30163175 5 + 53671032 I a score=3571.000000 s hg38.chr19_GL383574v1_alt 31299 4 + 155864 taaa s panTro5.chr19 36090126 4 + 61309027 aaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842135 4 + 64411610 aaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259883 3 - 8369475 -aaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854615 4 - 106955855 aaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34616042 4 + 59248254 taaa i macFas5.chr19 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e dasNov3.JH563638 280152 0 + 643850 C e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e chlSab2.chr6 29222167 5 + 50890351 I e canFam3.chr1 4571854 0 - 122678785 C e aotNan1.NW_018505377v1 318327 606 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28514687 1098 + 49145316 I e colAng1.NW_012111697v1 2281395 5 + 4274983 I e manLeu1.NW_012102454v1 835652 6513 - 2385121 I e cerAty1.NW_012005268v1 5414615 471 + 7714307 I e macNem1.NW_012011689v1 4483817 5 - 13342542 I e rheMac8.chr19 30163175 5 + 53671032 I a score=-3277.000000 s hg38.chr19_GL383574v1_alt 31303 7 + 155864 taaata---------a s panTro5.chr19 36090130 7 + 61309027 aaaaaa---------c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842139 7 + 64411610 aaaaaa---------c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259886 7 - 8369475 aaaaaa---------c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854619 16 - 106955855 aaacaaaaaaaaaccc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34616046 7 + 59248254 aaaata---------c i macFas5.chr19 C 0 C 0 s calJac3.chr22 28515785 6 + 49145316 aaaaga---------- i calJac3.chr22 I 1098 C 0 s dasNov3.JH563638 280152 2 + 643850 --------------gc i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e chlSab2.chr6 29222167 5 + 50890351 I e canFam3.chr1 4571854 0 - 122678785 C e aotNan1.NW_018505377v1 318327 606 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e colAng1.NW_012111697v1 2281395 5 + 4274983 I e manLeu1.NW_012102454v1 835652 6513 - 2385121 I e cerAty1.NW_012005268v1 5414615 471 + 7714307 I e macNem1.NW_012011689v1 4483817 5 - 13342542 I e rheMac8.chr19 30163175 5 + 53671032 I a score=1694.000000 s hg38.chr19_GL383574v1_alt 31310 1 + 155864 a s panTro5.chr19 36090137 1 + 61309027 a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842146 1 + 64411610 a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259893 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854635 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34616053 1 + 59248254 g i macFas5.chr19 C 0 C 0 s canFam3.chr1 4571854 1 - 122678785 a i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 280154 1 + 643850 a i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e chlSab2.chr6 29222167 5 + 50890351 I e aotNan1.NW_018505377v1 318327 606 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28515791 0 + 49145316 C e colAng1.NW_012111697v1 2281395 5 + 4274983 I e manLeu1.NW_012102454v1 835652 6513 - 2385121 I e cerAty1.NW_012005268v1 5414615 471 + 7714307 I e macNem1.NW_012011689v1 4483817 5 - 13342542 I e rheMac8.chr19 30163175 5 + 53671032 I a score=5634.000000 s hg38.chr19_GL383574v1_alt 31311 1 + 155864 t s panTro5.chr19 36090138 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842147 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259894 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854636 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30163180 1 + 53671032 t i rheMac8.chr19 I 5 C 0 s macFas5.chr19 34616054 1 + 59248254 t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4483822 1 - 13342542 t i macNem1.NW_012011689v1 I 5 C 0 s chlSab2.chr6 29222172 1 + 50890351 t i chlSab2.chr6 I 5 C 0 s colAng1.NW_012111697v1 2281400 1 + 4274983 t i colAng1.NW_012111697v1 I 5 C 0 s calJac3.chr22 28515791 1 + 49145316 c i calJac3.chr22 C 0 C 0 s canFam3.chr1 4571855 1 - 122678785 t i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 280155 1 + 643850 t i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e aotNan1.NW_018505377v1 318327 606 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e manLeu1.NW_012102454v1 835652 6513 - 2385121 I e cerAty1.NW_012005268v1 5414615 471 + 7714307 I a score=947429.000000 s hg38.chr19_GL383574v1_alt 31312 147 + 155864 aaacccataaaggacaaaaca--gatttggaaaggagacaacatcaacacagtttggaaggctg-aaaagcaaatagatgagttt-aaatga---cttagcaaagttgag--agccgcaacctaagtagtcagtgggaaaagccaagatgtaactt s panTro5.chr19 36090139 147 + 61309027 aaacccataaaggacaaaaca--gatttggaaatgagacaacatcaacacagtttggaaggttg-aaaagcaaatagatgagttt-aaatga---cttagcaaagttgag--agccacaacctaagtagtcagtgggaaaagccaagatgtacctt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842148 147 + 64411610 aaacccataaaggacaaaaca--gatttggaaatgagacaacatcaacacagtttggaaggctg-aaaagcaaatagatgagttt-aaatga---cttaacaaagttgag--agccacaacctaagtagtcagtgggaaaagccaagatgtacctt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6259895 146 - 8369475 aaa-ccataaaggacaaaaca--gatttggaaaggagacaacatcaacacagtttggaaggctg-caaagcaaatagatgagttt-aaatga---cttagcaaagttgag--agccgcaacctaagtagtcagtgggaaaagccaagatgtaactt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854637 147 - 106955855 aaacccataaaggacaaagta--gatttggaaaggagacaacatcaacacagtttagaaggctg-aaaagcaaatagatgagttt-aaatga---cttagcaaagttgcg--agccgcaacctaagtaggcagtgggaaaagccaagatgtaactt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30163181 147 + 53671032 aaacccatagaggacaaagta--gatttggaaaggagacagcatcaacacagtgtggaagactg-aaaagcaaatacatgacttt-aaatga---cttagcaaagttgag--agcggcaacctaagtaggcagtgggaaaagccaagatgtaactt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34616055 147 + 59248254 aaacccatagaggacaaagta--gatttggaaaggagacagcatcaacacagtgtggaagactg-aaaagcaaatacatgacttt-aaatga---cttagcaaagttgag--agcggcaacctaagtaggcagtgggaaaagccaagatgtaactt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4483823 147 - 13342542 aaacccatagaggacaaagta--gatttggaaaggagacagcatcaacacagtgtggaagactg-aaaagcaaatacatgacttt-aaatga---cttagcaaagttgag--agcggcaacctaagtaggcagtgggaaaagccaagatgtaactt i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29222173 147 + 50890351 aaacccatagaggacaaagta--gatttggaaaggagacagcatcaacacagtttggaagcctg-aaaagcaaatacatgacttt-aaatga---cttggcaaagttgag--agctgcaacctaagtaggcagtgggaaaagccaagatgtaactt i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2281401 147 + 4274983 aaactcatagaggacaaagta--gatttggaaaggagacagcatcaacacagtttggaagactg-aaaagcaaatacatgatttt-aaatga---cttagcaaagttgag--agccgcgacctaagtaggccgtgggaaaagccaagatgtaactt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28515792 151 + 49145316 aagcccctaaaggaccaaaatagaatttggaaaggagacagcatccacccagttggtaaggctgaaaaagcatatagatgagtttaaaatga---cttgaccaagttgag--agccgcaacctaagtagacagtggggaaagccaaaacgtaactt i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 318933 144 - 4471408 aaacccataaaggacgaa-----gatttggaaaggagacagcatcaacacagtttgtaagcctg-aaaagcaaataggtgagttt-aaatga---cttgaccaagctgag--agccgcaacctaagtaggcagtggggaaagccaagatgtaactt i aotNan1.NW_018505377v1 I 606 C 0 s canFam3.chr1 4571856 147 - 122678785 aaaaccataaaggacaaggta--gatttggaaaggagaca--agcaacaaaatattggagtttg-gaaagcatatggatgaattt-aaatga---cttagaagaattgagaaagctgcaacctaagtagacaatagattaagccaagaactaacct i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 280156 152 + 643850 gaacccatagagaacgaagta--gatttggaaaggagacaatagcaatagaattttggaagctg-gaaaacaaatggatgagttt-aagtgacttcttaacagaattgagaaagctacaacctaagcagacagttgagaaaaataagaagtaattt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e manLeu1.NW_012102454v1 835652 6513 - 2385121 I e cerAty1.NW_012005268v1 5414615 471 + 7714307 I a score=738440.000000 s hg38.chr19_GL383574v1_alt 31459 82 + 155864 gactttca-ccccaaactcctaaaa-ggctcaggagttgacatcaacaggcacAATGGAAACTAGAAGAT--TGAAGTAATT--GGGA s panTro5.chr19 36090286 82 + 61309027 gactttca-ccccaaactcctaaaa-ggctcaggagttgacatcaacaggcacAATGGAAACTAGAAGAT--TGAAGTAATT--GGGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842295 82 + 64411610 gactttca-ccccaaactcctaaaa-ggctcaggagttgacatcaacaggcacAATGGAAACTAGAAGAT--TGAAGTAATT--GGGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6260041 82 - 8369475 gactttca-ccccaaactcctaaaa-ggctcaggagttgacatcagcaggcacAATGGAAACTAGAAGAT--TGAAGTAATT--GGGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854784 82 - 106955855 gactttca-ccccaaactcctaaaa-ggctcaggagttgacatcaacaggcacAATGGAAACTAGAAAAT--TGAAGTAATT--GGGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30163328 82 + 53671032 gactttca-ccctaaactcctaaaa-ggctcaggagttgatatcaacaggcacAATGGAAACTAGAAGAT--TATAGTAATT--GGGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34616202 82 + 59248254 gactttca-ccctaaactcctaaaa-ggctcaggagttgatatcaacaggcacAATGGAAACTAGAAGAT--TATAGTAATT--GGGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4483970 82 - 13342542 gactttca-ccctaaactcctaaaa-ggctcaggagttgatatcaacaggcacAATGGAAACTAGAAGAT--TATAGTAATT--GGGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5415086 82 + 7714307 GACTTTCA-CCCTAAACTCCTAAAA-GGCTCAGGAGTTGATATCAACAGGCACAATGGAAACTAGAAGAT--TATAGTAATT--GGGA i cerAty1.NW_012005268v1 I 471 C 0 s chlSab2.chr6 29222320 82 + 50890351 gactttta-ccctaaactcctaaaa-ggctcaggagttgatatcaacaggcacAATGGAAACTAGAAGAT--TATAGTAATT--GGGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 842165 82 - 2385121 GACTTTCA-CCCTAAACTCCTAAAA-GGCTCAGGAGTTGATATCAACAGGCACAATGGAAACTAGAAGAT--TATAGTAATT--GGGA i manLeu1.NW_012102454v1 I 6513 C 0 s colAng1.NW_012111697v1 2281548 82 + 4274983 gactttca-ccctaaactcctaaaa-ggctcgggagttgatatcaacaggcacAATGGAAACTAGAAGAT--TGTAGTAATT--AGGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28515943 85 + 49145316 gactttca-ccccaaactcctgaaagggctcaggaattgacatcagtaggCGCAATGGAAGCTAGAAGAT--TGAAGTAAATTGGGGA i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 319077 82 - 4471408 gactttca-ccccaaactcctgaaa-ggctcaggaattgacatcagtaggcacAATGGAAGCTAGAAGAT--TGAAGTAACT--GGGG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4572003 81 - 122678785 ga--tgca-ccc-agactcctaaaa-gactcagtatttgacattaccaggtgcaatggaaactaaaagactatgaagtaatt--agga i canFam3.chr1 C 0 I 1691 s dasNov3.JH563638 280308 82 + 643850 gatatacatctccaaactcctaaaa-ggctcaggaattgtcaccgccaggtgcagtgggtactagaaaactgtgaagtaatt--g--- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I a score=111278.000000 s hg38.chr19_GL383574v1_alt 31541 14 + 155864 TGAA-GGGTGTAAGT s panTro5.chr19 36090368 14 + 61309027 TGAA-GGGTATAAGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842377 14 + 64411610 TGAA-GGGTATAAGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6260123 14 - 8369475 TGAA-GGGTGTAAGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854866 14 - 106955855 TGAA-GGGTGTAAGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30163410 14 + 53671032 TGAA-GGGTATAAGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34616284 14 + 59248254 TGAA-GGGTATAAGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4484052 14 - 13342542 TGAA-GGGTATAAGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5415168 14 + 7714307 TGAA-GGGTTTAAGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29222402 14 + 50890351 TGAA-GGGTATAAGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 842247 14 - 2385121 TGAA-GGGTTTAAGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2281630 14 + 4274983 TGAA-GGGTATAAGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28516028 15 + 49145316 TGAAGGGGTATGAGT i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 319159 14 - 4471408 TGAA-GGGTATGAGT i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 280390 11 + 643850 ---a-gggtgaaagt i dasNov3.JH563638 C 0 I 128 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e canFam3.chr1 4572084 1691 - 122678785 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I a score=1593858.000000 s hg38.chr19_GL383574v1_alt 31555 227 + 155864 TTTGGGTTATAAGTTTAACTTATTAACTTttaactttattgggtataagttacaatactat--aaaattcacccactgtaagtgtgcggtcc-cgtgaaagttgtgtatcc-atcacca----cagtccagttttctaacaattccatcaactcaagaag--------------------------------------------cttctttgttgatgtttagtcagtagctgcctacgacccccagtcctaggcaacctctgatctactttctTTTCT s panTro5.chr19 36090382 226 + 61309027 TTTGGGGTATAAGTTTAACTTATTAACTTttaactttattgggtataagttac-atactat--aaaattcacccactgtaagtgtgcagtcc-agtgaaagttgtgtatcc-atcacca----cagtccagttttctaacaattccatcaactcaagaag--------------------------------------------cttctttgtcgatgtttagtcagtagctgcctacgacccccagtcctaggcaacctctgatctactttcttttct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842391 226 + 64411610 TTTGGGGTATAAGTTTAACTTATTAACTTttaactttattgggtataagttac-atactat--aaaattcacccactgtaagtgtgcagtcc-agtgaaagttgtgtatcc-atcacca----cagtccagttttctaacaattccatcaactcaagaag--------------------------------------------cttctttgtcgatgtttagtcagtagctgcctacgacccccagtcctaggcaacctctgatctactttctTTTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6260137 225 - 8369475 TTTGGGGTATAAGTTTAACTTATTAACTTTtaactttattgggtataagttac-atactat--aaaattcacccactgtaagtgtgcagtcc-agtgaaagttgtgtatcc-atcacca----cagtccagttttctaacagttccatcaactcaagaag--------------------------------------------cttctttgtcgatgtttagtcagtagctgcctacga-ccccagtcctaggcaacctctgatctactttcttttct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63854880 224 - 106955855 TTTGGG-TATAAGTTTAACTTATTAACTTttaactttattgggtataagttac-atactat--aaaattcacccactgtaagtgtgcagtcc-aatgaaagttgtgtatcc-atcacca----cagtccagttttctaacgattccatcaattcaagaag--------------------------------------------cttctttgtcgatg-ttagtcagtagctgcctaggacccccagtcctaggcaacctctgatctgctttctTTTGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30163424 225 + 53671032 TTTGGGGTATAAGTTTAACCTGTTAACTTttaactttattgggtataagttac-atactat--aaaattcacccactgtaagtgtgcagtat-aatgaaagttgtgtatct-atcacca----cagtccacttttctaacaattccatcaactcgagaag--------------------------------------------cttttttgtggacg-ttagtcagtagctgcctacgacccctagtcctaggcaacctctgatctgctttcttttct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34616298 225 + 59248254 TTTGGGGTATAAGTTTAACCTGTTAACTTttaactttattgggtataagttac-atactat--aaaattcacccactgtaagtgtgcagtat-aatgaaagttgtgtatct-atcacca----cagtccacttttctaacaattccatcaactcgagaag--------------------------------------------cttttttgtggacg-ttagtcagtagctgcctacgacccctagtcctaggcaacctctgatctgctttctTTTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4484066 225 - 13342542 TTTGGGGTATAAGTTTAACCTGTTAACTTttaactttattgggtataagttac-atactat--aaaattcacccactgtaagtgtgcagtat-aatgaaagttgtgtatct-atcacca----cagtccacttttctaacaattccatcaactcgagaag--------------------------------------------cttttctgtggacg-ttagtcagtagctgcctacgacccctagtcctaggcaacctctgatctgctttcttttct i macNem1.NW_012011689v1 C 0 I 332 s cerAty1.NW_012005268v1 5415182 225 + 7714307 TTTGGGGTATAAGTTTAACCTGTTAACTTttaactttattgggtataagttac-atactat--aaaattcacccactgtaagtgtgcagtat-aatgaaagttgtgtatcc-atcacca----cagttcacttttctaacaattccatcaactcgagaag--------------------------------------------cttttttgtggacg-ttagtcagtagctgcctacgacccctagtcctaggcaacctctgatctgctttcttttct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29222416 225 + 50890351 TTTGGGGTATAAGTTTAACCTGTTAACTTttaactttattgggtataagttac-atactat--aaaattcacccactgtaagtgtgcagtat-aatgaaagttgtgtatcc-atcacca----cagtccaatattctaacaattccatcaactcgagaag--------------------------------------------cttttttgtggacg-ttagtcagtagctgcctacgacccctagtcctaggcaacctctgatctgctttcttttct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 842261 225 - 2385121 TTTGGGGTATAAGTTTAACCTGTTAACTTttaactttattgggtgtaagttac-atactat--aaaattcacccactgtaagtgtgcagtat-aatgaaagttgtgtatcc-atcacca----cagtccacttttctaacaattccatcaactcgagaag--------------------------------------------cttttttgtggacg-ttagtcagtagctgcctacgacccctagtcctaggcaacctctgatctgctttctTTTCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2281644 225 + 4274983 TTTGGGGTATAAGTTTAACCTGTTAACTTttaactttattgggtgtaagttac-atactat--aaaattcacccactgtaagtgtgcagtat-aatgaaagttgtgtatcc-atcacca----cagtccagttttctaacaattccatcaactcgagaag--------------------------------------------cttttttgtggaca-ttagtcagtagctgcctaggacccctagtcctaggcaacctctgatctgctttcCTTTCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28516043 261 + 49145316 TTTCTAGTGTAGGTTTAACTT----ACTTttaactttattgggtataagttac-atactatataaaattcacccattgtaagtgtacagtgcaaatgagagttgtgtagccaatcaccatagttagtccagttttctaacaatttcatcaagtcaagaaa------ttttttttttttttctcagcagtgtgaaaactgaaaagtttctttgtggatg-ttaatcagtagctg-ctcctacccgcagtcctaggcaacctctgatctgc-----tttct i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 319173 275 - 4471408 TTTCTAGTGTAGGTTTAACTTACTAACTTTtaacttaattgggtataagttac-atactatacaaaattcacccattgtaagtgtgcagtgc-aatgagagttgtgtagccaatcaccatagttagtccagttttctaacaatttcatcaactcaagaagtttcttttttttttttttttCTCAGCAGTGTGAAAACTGAAAAGTTTCTTTGTGGATG-TTAATCAGTAGCTG-CTCCTACCCGCAGTCCTAGGCAACCTCTGATCTGCTTTCTTTTCT i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e canFam3.chr1 4572084 1691 - 122678785 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I a score=87535.000000 s hg38.chr19_GL383574v1_alt 31782 14 + 155864 AGACtttcctttgc s panTro5.chr19 36090608 14 + 61309027 agactttcctttGC i panTro5.chr19 C 0 I 5921 s panPan2.chr19 39842617 14 + 64411610 AGACtttcctttgt i panPan2.chr19 C 0 I 2 s gorGor5.CYUI01015150v1 6260362 14 - 8369475 agactttcctTTGC i gorGor5.CYUI01015150v1 C 0 I 7 s nomLeu3.chr10 63855104 14 - 106955855 AGACtttcctttgc i nomLeu3.chr10 C 0 I 2 s rheMac8.chr19 30163649 14 + 53671032 agacttccctttgc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34616523 14 + 59248254 AGACTTCCCTTTGC i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5415407 14 + 7714307 agacttccctttgc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29222641 14 + 50890351 agactttcctttgc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 842486 14 - 2385121 AGACTTCCCTTTGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2281869 14 + 4274983 AGACTTTCCTTTGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28516304 13 + 49145316 AGACTTTCCGtt-t i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 319448 14 - 4471408 AGACTTTCCTTTGC i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e canFam3.chr1 4572084 1691 - 122678785 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e macNem1.NW_012011689v1 4484291 332 - 13342542 I a score=-19518.000000 s hg38.chr19_GL383574v1_alt 31796 19 + 155864 -------tttttttttttttttttg-a- s panTro5.chr19 36096543 19 + 61309027 -------tttttttttttttttttg-a- i panTro5.chr19 I 5921 C 0 s panPan2.chr19 39842633 20 + 64411610 -------tttttttttttttttttgta- i panPan2.chr19 I 2 C 0 s gorGor5.CYUI01015150v1 6260383 19 - 8369475 -------tttttttttttttttttg-a- i gorGor5.CYUI01015150v1 I 7 C 0 s nomLeu3.chr10 63855120 19 - 106955855 -------tttttttttttttttttg-a- i nomLeu3.chr10 I 2 C 0 s rheMac8.chr19 30163663 2 + 53671032 -----------------------tG--- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34616537 2 + 59248254 -----------------------TG--- i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5415421 2 + 7714307 -----------------------tg--- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29222655 2 + 50890351 -----------------------tG--- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 842500 2 - 2385121 -----------------------TG--- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2281883 2 + 4274983 -----------------------TG--- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28516317 26 + 49145316 tttttttttgttttttttttttttg--a i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 319462 26 - 4471408 ttttttttttttttttttttttttg--a i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e canFam3.chr1 4572084 1691 - 122678785 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e macNem1.NW_012011689v1 4484291 332 - 13342542 I a score=1623286.000000 s hg38.chr19_GL383574v1_alt 31815 220 + 155864 gacggag--ttttacagttgtcaccca-ggctggagtgcaatggcgcaatcttggctcactgcagcttctgcctcccgggttcaagtgattctcctacctcagcctcctgagtagctgggatgacaggcatgcaccaccatgccagctaa--tttttgtatttttaa----gagacggggtttcaccatgttggccaggctggtctc-gaactcctgacctcaggtgatc s panTro5.chr19 36096562 220 + 61309027 gacggag--ttttacagttgtcaccca-ggctggagtgcaatggcgcaatcttggctcactgcagcttctgcctcccgggttcaagtgattctcctacctcagcctcctgagtagctgggatgacaggcatgcaccaccatgccagctaa--tttttgtatttttaa----gagacggggtttcaccatgttgtccaggctggtctc-gaactcctgacctcaggtgatc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842653 220 + 64411610 gacggag--ttttacagttgtcaccca-ggctggagtgcaatggcgcaatcttggctcactgcagcttctgcctcccgggttcaagtgattctcctacctcagcctcctgagtagctgggatgacaggcatgcaccaccatgccagctaa--tttttgtatttttaa----gagacggggtttcaccatgttgtccaggctggtctc-gaactcctgacctcaggtgatc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6260402 220 - 8369475 gacggag--ttttacagttgtcaccca-ggctggggtgcaatggcacaatcttggctcactgcagcttccgcctcccgggttcaagtgattctcctacctcagcctcctgagtagctgggatgacaggcatgcgccaccatgccagctaa--tttttgtatttttaa----gagacggggtttcaccatgttggccaggctggtctc-gaactcctgacctcaggtgatc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63855139 222 - 106955855 aacgggagtttttatagttgtcacccagggctggagtgcaatggcgcaatcttggctcactgcag-ttccgcctacagaaatcaagtgattatcctgcctcagcctcccgagtagctgggatgacaggcatgcaccaccatgccagctaa--tttttgtatttttaa----gagacggggtttcaccatgttggccaggctgttctc-gaactcctgacctcaggtgatc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30163665 222 + 53671032 gacggag--ttttacaattgtcattca-ggctggagtgcaatggcgcaatcttggctcactgcagcctctgcctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggatgacaggcatgcaccaccatgccagctaa--tttttgtattttgaa--tagagacggggtttcatcatgttgaccaggctgatctc-caactcctgacctcaggtgatc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34616539 222 + 59248254 gacggag--ttttacaattgtcactca-ggctggagtgcaatggcgcaatcttggctcactgcagcctctgcctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggatgacaggcatgcaccaccatgccagctaa--tttttgtattttgaa--tagagacggggtttcatcatgttgaccaggctgatctc-caactcctgacctcaggtgatc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4484623 222 - 13342542 gacggag--ttttacaattgtcactca-ggctggagtgcaatggcgcaatcttggctgactgcagcctctgcctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggatgacaggcatgcaccaccatgccagctaa--tttttgtattttgaa--tagagacggggtttcatcatgttgaccaggctgatctc-caactcctgacctcaggtgatc i macNem1.NW_012011689v1 I 332 C 0 s cerAty1.NW_012005268v1 5415423 222 + 7714307 gaTGGAG--TTTTACAATtgtcactca-ggctggagtgcaatggcgcaatcttggctcactgcagcctctgcctcctggattcaagtgattctcctgcctcagcctcctgagtagctgggatgacaggcatgcaccaccatgccagctaa--tttttgtattttgaa--tagagacggggtttcatcatgttgaccaggctgatctc-caactcctgacctcaggtgatc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29222657 224 + 50890351 gacggag--ttttacaattgttactca-ggctggagtgcaatggcgcaatcttggctcactgcagcctctgcctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggatgacaggcatgcaccaccatgccagctaa--tttttgtattttgtattttgaataggggtttcatcatgttgaccaggctgatctc-caactcctgacctcaggtgatc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 842502 222 - 2385121 gatggag--ttttacaattgtcactca-ggctggagtgcaatggcgcaatcttggctcactgcagcctctgcctcctggattcaagtgattctcctgcctcagcctcctgagtagctgggatgacaggcatgcaccaccatgccagctaa--tttttgtattttgaa--tagagacagggtttcatcatgttgaccaggctgatctc-caactcctgacctcaggtgatc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2281885 222 + 4274983 gatggag--ttttacaattgtcactca-ggctggagtgcaatggcgcgatcttggctcactgcagcctctgcctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggatgacaggcatgcaccactatgccagctaa--tttttgtattttgaa--tagagacggggtttcatcatgttgaccaggctgatctc-caactcctgacctcaggtgatc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28516343 225 + 49145316 gacagag--ttttactcttgttgccca-aggtggaatgcagtggtgcgatcttggctcactgcaacctcctccttccaggttcaagtgcttcttctgcctcagcctcctgagtagctgggattacaggtgtgtgccaccacacctgctaatttttttgtatttttag--tggagacagggtttcaccatgttggccaagctggtctcagaactcctgacctcaggtgatc i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 319488 225 - 4471408 gacagag--ttttactcttgttgccca-gggtggaatgcagtggtgtaatcttggcttactgcaacctcctccttccaggttcaagtgcttctcctgcctcagcctactgagtagctgggattacaggtgtatgccaccatacccgctaatttttttgtatttttag--tggagacggggtttcaccatgttggccaagctggtctcggaactcctgacctcaggtgatc i aotNan1.NW_018505377v1 C 0 I 2365 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e canFam3.chr1 4572084 1691 - 122678785 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I a score=368919.000000 s hg38.chr19_GL383574v1_alt 32035 59 + 155864 cacctgcctcggccttccaaagtgctggaattataggcatgagccactgcgcccagccT s panTro5.chr19 36096782 59 + 61309027 cacctgcctcggccttccaaagtgctggaattataggcatgagccactgtgcccagccT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842873 59 + 64411610 cacctgcctcggccttccaaagtgctggaattataggcatgagccactgtgcccagccT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6260622 59 - 8369475 cgcctgcctcggccttccaaagtgctggaattataggcatgagccactgtgcccagccT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63855361 59 - 106955855 cgcctgcctcggccttccaaagtgctggaattataggcatgagccactgcgcccggcGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30163887 59 + 53671032 cgcctaccttggccgcccaaagtgctggaattacaggcatgagccactgctgccagccT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34616761 59 + 59248254 cgcctaccttggccgcccaaagtgctggaattacaggcatgagccactgctgccagccT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4484845 59 - 13342542 cgcctaccttggccgcccaaagtgctggaattacaggcatgagccactgctgccagccT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5415645 59 + 7714307 cgcctaccttggcctcccaaagtgctggaattacaggcatgagccactgctcccagccT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29222881 59 + 50890351 cgcctgcctcggcctcccaaagtgctggaattacaggcatgagccactgctcccagccT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 842724 59 - 2385121 cgcctaccttggcctcccaaagtgctggaattacaggcatgagccactgctcccagccT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2282107 59 + 4274983 cgcctacctcggcctcccaaagtgctggaattacaggcatgagccgctgctcccagccT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28516568 59 + 49145316 tgcccatctcagcctcccaaagtgctggcattataggtgtgagccaccgcgcctgaccC i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111059727 1324 - 145441459 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I a score=8281.000000 s hg38.chr19_GL383574v1_alt 32094 1 + 155864 T s panTro5.chr19 36096841 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842932 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6260681 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63855420 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30163946 1 + 53671032 T i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34616820 1 + 59248254 T i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4484904 1 - 13342542 T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5415704 1 + 7714307 T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29222940 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 842783 1 - 2385121 T i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2282166 1 + 4274983 T i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28516627 1 + 49145316 T i calJac3.chr22 C 0 I 3259 s mm10.chr7 111061051 1 - 145441459 T i mm10.chr7 I 1324 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I a score=22698.000000 s hg38.chr19_GL383574v1_alt 32095 3 + 155864 TCC s panTro5.chr19 36096842 3 + 61309027 TCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842933 3 + 64411610 TCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6260682 3 - 8369475 TCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63855421 3 - 106955855 TCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30163947 3 + 53671032 TCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34616821 3 + 59248254 TCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4484905 3 - 13342542 TCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5415705 3 + 7714307 TCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29222941 3 + 50890351 TCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 842784 3 - 2385121 TCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2282167 3 + 4274983 TCC i colAng1.NW_012111697v1 C 0 C 0 s mm10.chr7 111061052 3 - 145441459 TCC i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 515356 6911 + 2501019 I e micMur3.chr22 3926348 1260 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I a score=202363.000000 s hg38.chr19_GL383574v1_alt 32098 28 + 155864 TTTGCTTTTAATATGTAAA------TTATTAAAT s panTro5.chr19 36096845 28 + 61309027 TTTGCTTTTAATATGTAAA------TTATTAAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842936 28 + 64411610 TTTGCTTTTAATATGTAAA------TTATTAAAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6260685 28 - 8369475 TTTGCTTTTAATATGTAAA------TTATTAAAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63855424 34 - 106955855 TTTGCTTTTAATATGTAAATTATACTTATTAAAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30163950 34 + 53671032 TTTGCTTTTAATATGTAAATTATACTTATTAAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34616824 34 + 59248254 TTTGCTTTTAATATGTAAATTATACTTATTAAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4484908 34 - 13342542 TTTGCTTTTAATATGTAAATTATACTTATTAAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5415708 34 + 7714307 TTTGCTTTTAATATGTAAATTATACTTATTAAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29222944 34 + 50890351 TTTGCTTTTAATATGTAAATTATACTTATTAAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 842787 34 - 2385121 TTTGCTTTTAATATGTAAATTATACTTATTAAAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2282170 34 + 4274983 TTTGCTTTTAATATGTAAATTATACTTATTAAAT i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 522267 29 + 2501019 TTTGCTTTTAATATGTAAATTATACCGAT----- i proCoq1.NW_012149263v1 I 6911 C 0 s mm10.chr7 111061055 29 - 145441459 TTTGCTTTTAATCTGTAAATTATACTGAT----- i mm10.chr7 C 0 C 0 e micMur3.chr22 3926348 1260 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I a score=1791681.000000 s hg38.chr19_GL383574v1_alt 32126 245 + 155864 TGATTTCCTAATATTAAAACATTCTTGCATTTTTAGAAACCTTAAATTTCAAACAAC--------------------------------------TGTAT-TTCTCTAtatca---------------------------------------------------------------------------------------------attatcaattggagtaattagccatta-----------------tctataatAgattcattacatggagttcatg-g-tagatttcagggagt-cttgatcccctgaagttataagcaatttttatttacatacagaaacatttggggagagggttcatagatgtctttaattttccaagACCCAGATAAA s panTro5.chr19 36096873 245 + 61309027 TGATTTCCTAATATTAAAACATTCTTGCATTTTTAGAAACCTTAAATTTCAAACAAC--------------------------------------TGTAT-TTCTCTAtatca---------------------------------------------------------------------------------------------attatcaattggagtaattagccatta-----------------tctataatAgattcattacatggagttcatg-g-tagatttcagggagt-cttgatcccctgaagttataagcaatttttatttacatacagaaacatttggggagagggttcatagatgtctttaattttccaagACCCAGATAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39842964 245 + 64411610 TGATTTCCTAATATTAAAACATTCTTGCATTTTTAGAAACCTTAAATTTCAAACAAC--------------------------------------TGTAT-TTCTCTAtatca---------------------------------------------------------------------------------------------attatcaattggagtaattagccatta-----------------tctataatAgattcattacatggagttcatg-g-tagatttcagggagt-cttgatcccctgaagttataagcaatttttatttacatacagaaacatttggggagagggttcatagatgtctttaattttccaagACCCAGATAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6260713 245 - 8369475 TGATTTCCTAATATTAAAACATTCTTGCATTTTTAGAAACCTTAAATTTCAAACAAC--------------------------------------TGTAT-TTCTCTAtatca---------------------------------------------------------------------------------------------attatcaattggagtaattagccatta-----------------tctataatAgattcattacatggagctcatg-g-tagatttcagggagt-cttgatcccctgaagttataagcaatttttatttacatacagaaacatttggggagagggttcatagatgtctttaattttccaagACCCAGATAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63855458 242 - 106955855 TGATTTCCTAATATTAAAACATTCTTGCATTTTTAGAAACCTTAAATTTCAAACAAC--------------------------------------TGTAT-TTCTCTATATCA---------------------------------------------------------------------------------------------ATGATCAATTGGAGTAATTAGCCATTA-----------------TCTATAATAgattcattacatggagttcatg-g-tagatttcagggagt-cttgatcccctgaagttataagcaatttttatttacatacagaaacatttggggagagggttcatagATG---TTAATTTTCCAAGACCCAGATAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30163984 245 + 53671032 TGATTTTCTAATATTAAAACTTTCTTGCATTTTTAGAAACCTTAAATTTCAAACAAC--------------------------------------TGTAT-TTCTCTGTATCA---------------------------------------------------------------------------------------------ATTATCAGTTGGAGTAATTAGCCATTA-----------------TCTATAATAgattcattacatggagttcatg-g-tagatttcagggagt-ctcgatcccctgaagttataagctatttttatttacatacggaaacatttgggaagagggttcacagatgtttttaattttccaagACCCAAATAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34616858 245 + 59248254 TGATTTTCTAATATTAAAACTTTCTTGCATTTTTAGAAACCTTAAATTTCAAACAAC--------------------------------------TGTAT-TTCTCTGTATCA---------------------------------------------------------------------------------------------ATTATCAGTTGGAGTAATTAGCCATTA-----------------TCTATAATAGATTCATTACATGGAGTTCATG-G-TAGATTTCAGGGAGT-CTCGATCCCCTGAAGTTATAAGCTATTTTTATTTACATACGGAAACATTTGGGAAGAGGGTTCACAGATGTTTTTAATTTTCCAAGACCCAAATAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4484942 245 - 13342542 TGATTTTCTAATATTAAAACTTTCTTGCATTTTTAGAAACCTTAAATTTCAAACTAC--------------------------------------TGTAT-TTCTCTGTATCA---------------------------------------------------------------------------------------------ATTATCAGTTGGAGTAATTAGCCATTA-----------------TCTATAATAgattcattacatggagttcatg-g-tagatttcagggagt-ctcgatcccctgaagttataagctatttttatttacatacggaaacatttgggaagagggttcacagatgtttttaattttccaagACCCAAATAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5415742 245 + 7714307 TGATTTTCTAATATTAAAACTTTCTTGCATTTTTAGAAACCTTAAATTTCAAACAAC--------------------------------------TGTAT-TTCTCTGTATCA---------------------------------------------------------------------------------------------ATTATCAGTTGGAGTAATTAGCCATTA-----------------TCTATAATAgattcattacatggagttcatg-g-tagatttcagggagt-ctcgatcccctgaagttataagctatttttatttacatacggaagcatttgggaagagggttcacagatatttttaattttccaagACCCAAATAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29222978 245 + 50890351 TGATTTTCTAATATTAAAACTTTCTTGCATTTTTAGAAACCTTAAATTTCAAACAAC--------------------------------------TGTAT-TTCTCTGTATCA---------------------------------------------------------------------------------------------ATTATCAGTTGGAATAATTAGCCATTA-----------------TCTATAATAGATTCATTACATGGAGTTCATG-G-TAGGTTTCAGGGAGT-CTCGATCCCCTGAAGTTATAAGCTATTTTTATTTACATACGGAAACATTTGGGAAGGGGGTTCATAGATGTTTTTAATTTTCCAAGACCCAAATAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 842821 245 - 2385121 TGATTTTCTAATATTAAAACTTTCTTGCATTTTTAGAAACCTTAAATTTCAAACAAC--------------------------------------TGTAT-TTCTCTGTATCA---------------------------------------------------------------------------------------------ATTATCAGTTGGAGTAATTAGCCATTA-----------------TCTATAATAGATTCATTACATGGAGTTCATG-G-TAGATTGCAGGGAGT-CTCGATCCCCTGAAGTTATAAGCTATTTTTATTTACATACGGAAACATTTGGGAAGAGGGTTCACAGATATTTTTAATTTTCCAAGACCCAAATAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2282204 245 + 4274983 TGATTTCCTAATATTAAAACTTTCTTGCATTTTTAGAAACCTTAAATTTCAAACAAC--------------------------------------TGTAT-TTCTCTGTATCA---------------------------------------------------------------------------------------------ATTATCAATTGGAGTAATTAGCCACTA-----------------TCTATAATAgattcattacatggagttcatg-g-tagatttcagggagt-ctggatcccctgaagttacaagctatttttatttacatacggaaacatttgggaagagggttcatagATGTTTTTAATTTTCCAAGACCCAGATAAA i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3927608 243 - 30143674 TGATTTCCTAATATCAAAACATTCTTGTATTTTTAGAAGACTTAAGTTTCAAACAAT--------------------------------------TGTATATTCTGTATATTT---------------------------------------------------------------------------------------------GT-ATCAACTTGAATAATTAGCCTGTA-----------------TT--TAACggcttgtttacatggagtttatg-gatggatttcagggagtccttggtctcctgaagttataagcaa--attgtttacatgtgtaaacatttggggaaagagttcatagattatattagttttccaaGACCCAAATAAA i micMur3.chr22 I 1260 C 0 s proCoq1.NW_012149263v1 522296 243 + 2501019 TGATTTCCTAATGTCAAAACATTCTTGCGTTTTTAGAAGACTTAAGTTTCAAACAAT--------------------------------------TGTGTATTCTCTATATTT---------------------------------------------------------------------------------------------GT-ATCAACTTGAATAATTAGCTAGTA-----------------TT--TAATGGGTTCTTTACATAGAGTTTATG-GATGGATTTCAGGGAGTCCTTGATCTCCTGAAGTTATAAGCAA--ATTGTTTACATGTGTAAACATTTGGGGAGAGAGTTCATAGATTTTATTAGTTTTCCAAGATCCATATAAA i proCoq1.NW_012149263v1 C 0 I 11 s mm10.chr7 111061084 383 - 145441459 TGGTTTTCTAAT-TCAGAAC-----TGTATTTTAGAAAGCTATGA--TTCAAATAATTACACTGGAGCCCCCAACTTACTCCAgttttacctgcatgtat-gtatgtacatcacaaatgtgcctggtgctaaagtcagaaaagtattattgagtcctctagaactgtagatataaatggtcacgagtcaccatgtgctaggaacctactagcaataagtgctcttaaccactgagctatctttccagcccTATCTAATggattcttaacatggagttattgag-tggatttcacggggtctttgctcccctgaagttataaatgaatcttgt---catgtataa-cattcaggaagaaagttgaaagatttTTGTAGTTTTATGAGCCACAGAGGAG i mm10.chr7 C 0 C 0 e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I a score=111683.000000 s hg38.chr19_GL383574v1_alt 32371 22 + 155864 TACAA----GCTACCTTTGCTTATGC s panTro5.chr19 36097118 22 + 61309027 TACAA----GCTACCTTTGCTTATGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39843209 22 + 64411610 TACAA----GCTACCTTTGCTTATGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6260958 22 - 8369475 TACAA----GCTACCTTTGCTTACGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63855700 21 - 106955855 TACAA----GCTACCTTCGC-TATGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30164229 21 + 53671032 TACAA----GCTACCTTCGC-TATGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34617103 21 + 59248254 TACAA----GCTACCTTCGC-TATGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4485187 21 - 13342542 TACAA----GCTACCTTCGC-TATGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5415987 21 + 7714307 TACAA----GCTACCTTCGC-TATGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29223223 21 + 50890351 TACAA----GCTACCTTCGC-TATGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 843066 21 - 2385121 TACAA----GCTACCTTCGC-TATGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2282449 21 + 4274983 TACAA----GCTACCTTTGC-TATGC i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3927851 11 - 30143674 ----A----TCTACCTTCT------- i micMur3.chr22 C 0 C 0 s mm10.chr7 111061467 25 - 145441459 TAAAACCTGTCTGTCTTCTC-TATGC i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 522539 11 + 2501019 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I a score=174085.000000 s hg38.chr19_GL383574v1_alt 32393 28 + 155864 CTAAGTTAAAAGT---TTTAA-CATATCTTTT s panTro5.chr19 36097140 28 + 61309027 CTAAGTTAAAAGT---TTTAA-CATCTCTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39843231 28 + 64411610 CTAAGTTAAAAGT---TTTAA-CATCTCTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6260980 28 - 8369475 CTAAGTTAAAAGT---TTTAA-CATATCTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63855721 28 - 106955855 CTAAGTTAAAAGT---TTTAA-CATATCTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30164250 29 + 53671032 CTAAGATAAAAGT---TTTAACCGTATCTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34617124 28 + 59248254 CTAAGATAAAAGT---TTTAA-CGTATCTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4485208 28 - 13342542 CTAAGATAAAAGT---TTTAA-TGTATCTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5416008 28 + 7714307 CTAAGATAAAAGT---TTTAA-CGTATCTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29223244 28 + 50890351 CTAAGATAAAAGT---CTTAA-CGTATCTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 843087 28 - 2385121 CTAAGATAAAAGT---TTTAA-CGTATCTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2282470 23 + 4274983 C-----TAAAAGT---TTTAA-CGTATCTTTC i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3927862 26 - 30143674 CTAAAATAAAAGC---TTTAA-C--ATCTTTT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 522550 26 + 2501019 CCAAAATAAAAGC---TTTAA-C--ATCTTTC i proCoq1.NW_012149263v1 I 11 C 0 s mm10.chr7 111061492 26 - 145441459 -----CTAAGAATTTGTTTAA-CAGAATTTTT i mm10.chr7 C 0 I 3562 e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I a score=384675.000000 s hg38.chr19_GL383574v1_alt 32421 51 + 155864 CACTTTTCTCCCTTTGTCCCATTTTCCAGGTTTTATCTAATT---TGGGGTTTA s panTro5.chr19 36097168 51 + 61309027 CACTTTTCTCCCTTTGTCCCATTTTCCAGGTTTTATCTAATT---TGGGGTTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39843259 51 + 64411610 CACTTTTCTCCCTTTGTCCCATTTTCCAGGTTTTATCTAATT---TGGGGTTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6261008 51 - 8369475 CACTTTTCTCCCTTTGTTCCATTTTCCAGGTTTTATCTAATT---TGGGGTTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63855749 51 - 106955855 CACTTTTCTCCCTTTGTCCCATTTTCCAGGTTTTATCTAATT---TGGGGTTTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30164279 50 + 53671032 TACTTTTCTCCCTTTGTCCCATTTTCCAGGTTTTATCTAA-T---TGGGGTTTA i rheMac8.chr19 C 0 I 6 s macFas5.chr19 34617152 51 + 59248254 TACTTTTCTCCCTTTGTCCCATTTTCCAGGTTTTATCTAATT---TGGGGTTTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4485236 51 - 13342542 TACTTTTCTCCCTTTGTCCCATTTTCCAGGTTTTATCTAATT---TGGGGTTTA i macNem1.NW_012011689v1 C 0 I 6 s cerAty1.NW_012005268v1 5416036 51 + 7714307 TACTTTTCTCCCTTTGTCCCATTTTCCAGGTTTTATCTAATT---TGGGGTTTA i cerAty1.NW_012005268v1 C 0 I 6 s chlSab2.chr6 29223272 51 + 50890351 TACTTTTCTCCCTTTGTCCCATTTTCCAAGTTTTATCTAATT---TGGGGTTTA i chlSab2.chr6 C 0 I 4 s manLeu1.NW_012102454v1 843115 51 - 2385121 TACTTTTCTCCCTTTGTCCCATTTTCCAGGTTTTATCTAATT---TGGAGTTTA i manLeu1.NW_012102454v1 C 0 I 7370 s colAng1.NW_012111697v1 2282493 51 + 4274983 TACTTTTCTCCCTTTGCCCCATTTTCCAGGTTTTATCTAATT---TGGGGTTTA i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3927888 51 - 30143674 TACTTTTCTTCCTTTGCCCCATTTTCCAGGTTTTGTCTAACT---TGGAGTTTA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 522576 54 + 2501019 TAATTTTCTTCATTTGCTGCATTTTCCAGGTTTTATCTAACTTAATAATGTTTA i proCoq1.NW_012149263v1 C 0 C 0 e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I a score=52714.000000 s hg38.chr19_GL383574v1_alt 32472 40 + 155864 GGTTACAGATTGTTATTATTACATTGCTTCTATTTTTAGA s panTro5.chr19 36097219 40 + 61309027 GGTTACAGATTGTTATTATTACATTGCTTCTATTTTTAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39843310 40 + 64411610 GGTTACAGATTGTTATTATTACATTGCTTCTATTTTTAGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6261059 40 - 8369475 GGTTACAGATTGTTATTATTACATTGCTTCTATTTTTAGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63855800 40 - 106955855 AGTTACAGATTGTTATTATTACATTGCTTCTATTTTTAGA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34617203 6 + 59248254 AATTAC---------------------------------- i macFas5.chr19 C 0 C 0 s colAng1.NW_012111697v1 2282544 6 + 4274983 AGTTAC---------------------------------- i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3927939 37 - 30143674 AGTTAC---TTGTTATTACTACATTGTTTATATTTTTAGA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 522630 40 + 2501019 AGTTACAAGTTGTTATTACTACATTGTTTGTATTTTTAGA i proCoq1.NW_012149263v1 C 0 C 0 e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e chlSab2.chr6 29223323 4 + 50890351 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I e manLeu1.NW_012102454v1 843166 7370 - 2385121 I e cerAty1.NW_012005268v1 5416087 6 + 7714307 I e macNem1.NW_012011689v1 4485287 6 - 13342542 I e rheMac8.chr19 30164329 6 + 53671032 I a score=5096.000000 s hg38.chr19_GL383574v1_alt 32512 2 + 155864 AT s panTro5.chr19 36097259 2 + 61309027 AT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39843350 2 + 64411610 AT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6261099 2 - 8369475 AT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63855840 2 - 106955855 AT i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29223327 2 + 50890351 AT i chlSab2.chr6 I 4 C 0 s micMur3.chr22 3927976 2 - 30143674 AT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 522670 2 + 2501019 AT i proCoq1.NW_012149263v1 C 0 C 0 e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I e colAng1.NW_012111697v1 2282550 0 + 4274983 C e manLeu1.NW_012102454v1 843166 7370 - 2385121 I e cerAty1.NW_012005268v1 5416087 6 + 7714307 I e macNem1.NW_012011689v1 4485287 6 - 13342542 I e macFas5.chr19 34617209 0 + 59248254 C e rheMac8.chr19 30164329 6 + 53671032 I a score=280215.000000 s hg38.chr19_GL383574v1_alt 32514 44 + 155864 CCCTTAAGAGCAGT-TTTATTAGCAATGTTGACTTAGATAAAACT s panTro5.chr19 36097261 44 + 61309027 CCCTTAAGAGCAGT-TTTATTAGCAATGTTGACTTAGATAAAACT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39843352 44 + 64411610 CCCTTAAGAGCAGT-TTTATTAGCAATGTTGACTTAGATAAAACT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6261101 44 - 8369475 CCCTTAAGAGCAGT-TTTATTAGCAATGTTGACTTAGATAAAACT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63855842 44 - 106955855 CCTTTAAGAGCAGT-TTTATTAGCAATGTTGACTTAGATAAAACT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30164335 45 + 53671032 CCCTTAAGAGCAGCTTTTATTTACAGTGTTGACTTAGATAAAACT i rheMac8.chr19 I 6 C 0 s macFas5.chr19 34617209 44 + 59248254 CCCTTAAGAGCAGC-TTTATTTACAGTGTTGACTTAGATAAAACT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4485293 44 - 13342542 CCCTTAAGAGCAGC-TTTATTTACAGTGTTGACTTAGATAAAACT i macNem1.NW_012011689v1 I 6 C 0 s cerAty1.NW_012005268v1 5416093 44 + 7714307 CCCTTAAGAGCAGC-TTTATTTACAGTGTTGACTTAGATAAAACT i cerAty1.NW_012005268v1 I 6 C 0 s chlSab2.chr6 29223329 44 + 50890351 CCCTTAGGAGCAGC-TTTATTTACAATGTTGACTTAGATAAAACT i chlSab2.chr6 C 0 I 3563 s colAng1.NW_012111697v1 2282550 44 + 4274983 CCCTTAAGAGCAGC-TTTATTTACAATGTTGACTTAGATAAAACT i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3927978 44 - 30143674 CCCATAAGAACAGT-TTTATTAACAATATTGATTTAGATAAAACT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 522672 44 + 2501019 CCCTTAAGAGCAGT-TTTATTAACAATATTGATTTAGATAAAACT i proCoq1.NW_012149263v1 C 0 C 0 e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I e manLeu1.NW_012102454v1 843166 7370 - 2385121 I a score=6600.000000 s hg38.chr19_GL383574v1_alt 32558 1 + 155864 G s panTro5.chr19 36097305 1 + 61309027 G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39843396 1 + 64411610 G i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6261145 1 - 8369475 G i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63855886 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30164380 1 + 53671032 G i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34617253 1 + 59248254 G i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4485337 1 - 13342542 G i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5416137 1 + 7714307 G i cerAty1.NW_012005268v1 C 0 C 0 s colAng1.NW_012111697v1 2282594 1 + 4274983 G i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3928022 1 - 30143674 G i micMur3.chr22 C 0 I 2114 s proCoq1.NW_012149263v1 522716 1 + 2501019 G i proCoq1.NW_012149263v1 C 0 T 8984 e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e chlSab2.chr6 29223373 3563 + 50890351 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I e manLeu1.NW_012102454v1 843166 7370 - 2385121 I a score=8595.000000 s hg38.chr19_GL383574v1_alt 32559 2 + 155864 AG s panTro5.chr19 36097306 2 + 61309027 AG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39843397 2 + 64411610 AG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6261146 2 - 8369475 AG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63855887 2 - 106955855 AG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30164381 2 + 53671032 AG i rheMac8.chr19 C 0 I 3924 s macFas5.chr19 34617254 2 + 59248254 AG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4485338 2 - 13342542 AG i macNem1.NW_012011689v1 C 0 I 3571 s cerAty1.NW_012005268v1 5416138 2 + 7714307 AG i cerAty1.NW_012005268v1 C 0 I 3566 s colAng1.NW_012111697v1 2282595 2 + 4274983 AG i colAng1.NW_012111697v1 C 0 I 3563 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3928023 2114 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e chlSab2.chr6 29223373 3563 + 50890351 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I e manLeu1.NW_012102454v1 843166 7370 - 2385121 I a score=24667.000000 s hg38.chr19_GL383574v1_alt 32561 24 + 155864 GGGGCttttttgttttttgttttt s panTro5.chr19 36097308 24 + 61309027 GGGGCttttttgttttttgttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39843399 24 + 64411610 GGGGCttttttgttttttgttttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6261148 24 - 8369475 GGGGCttttttgttttttgttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63855889 19 - 106955855 -----ttttttgttttttattttt i nomLeu3.chr10 C 0 I 3871 s macFas5.chr19 34617256 19 + 59248254 -----TTttttccttttttttttt i macFas5.chr19 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3928023 2114 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e chlSab2.chr6 29223373 3563 + 50890351 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I e colAng1.NW_012111697v1 2282597 3563 + 4274983 I e manLeu1.NW_012102454v1 843166 7370 - 2385121 I e cerAty1.NW_012005268v1 5416140 3566 + 7714307 I e macNem1.NW_012011689v1 4485340 3571 - 13342542 I e rheMac8.chr19 30164383 3924 + 53671032 I a score=5694.000000 s hg38.chr19_GL383574v1_alt 32585 7 + 155864 gtttttC s panTro5.chr19 36097332 7 + 61309027 gtttttc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39843423 7 + 64411610 gtttttc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6261172 7 - 8369475 gtttttc i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34617275 7 + 59248254 ttttttc i macFas5.chr19 C 0 I 3894 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3928023 2114 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e chlSab2.chr6 29223373 3563 + 50890351 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I e colAng1.NW_012111697v1 2282597 3563 + 4274983 I e manLeu1.NW_012102454v1 843166 7370 - 2385121 I e cerAty1.NW_012005268v1 5416140 3566 + 7714307 I e macNem1.NW_012011689v1 4485340 3571 - 13342542 I e rheMac8.chr19 30164383 3924 + 53671032 I e nomLeu3.chr10 63855908 3871 - 106955855 I a score=1146.000000 s hg38.chr19_GL383574v1_alt 32592 2 + 155864 gt s panTro5.chr19 36097339 2 + 61309027 gt i panTro5.chr19 C 0 I 3870 s panPan2.chr19 39843430 2 + 64411610 gt i panPan2.chr19 C 0 I 3838 s gorGor5.CYUI01015150v1 6261179 2 - 8369475 gt i gorGor5.CYUI01015150v1 C 0 I 3845 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3928023 2114 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e chlSab2.chr6 29223373 3563 + 50890351 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I e colAng1.NW_012111697v1 2282597 3563 + 4274983 I e manLeu1.NW_012102454v1 843166 7370 - 2385121 I e cerAty1.NW_012005268v1 5416140 3566 + 7714307 I e macNem1.NW_012011689v1 4485340 3571 - 13342542 I e macFas5.chr19 34617282 3894 + 59248254 I e rheMac8.chr19 30164383 3924 + 53671032 I e nomLeu3.chr10 63855908 3871 - 106955855 I a score=2865.000000 s hg38.chr19_GL383574v1_alt 32594 2 + 155864 ca s panTro5.chr19 36101211 2 + 61309027 ca i panTro5.chr19 I 3870 C 0 s panPan2.chr19 39847270 2 + 64411610 ca i panPan2.chr19 I 3838 C 0 s nomLeu3.chr10 63859779 2 - 106955855 ca i nomLeu3.chr10 I 3871 C 0 s manLeu1.NW_012102454v1 850536 2 - 2385121 ca i manLeu1.NW_012102454v1 I 7370 C 0 s colAng1.NW_012111697v1 2286160 2 + 4274983 ca i colAng1.NW_012111697v1 I 3563 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3928023 2114 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e chlSab2.chr6 29223373 3563 + 50890351 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I e cerAty1.NW_012005268v1 5416140 3566 + 7714307 I e macNem1.NW_012011689v1 4485340 3571 - 13342542 I e macFas5.chr19 34617282 3894 + 59248254 I e rheMac8.chr19 30164383 3924 + 53671032 I e gorGor5.CYUI01015150v1 6261181 3845 - 8369475 I a score=215018.000000 s hg38.chr19_GL383574v1_alt 32596 53 + 155864 gagacaaggttcttgaggacacaacatttaagctggggcctgacagatgagtt s panTro5.chr19 36101213 53 + 61309027 gagacaaggttcttgaggacacaacatttaagctggggcctgacagatgagtt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39847272 53 + 64411610 gagacaaggttcttgaggacacaacatttaagctggggcctgacagatgagtt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6265026 53 - 8369475 gagacaaggttcttgaggacacaacatttaagctggggcctgacagatgagtt i gorGor5.CYUI01015150v1 I 3845 C 0 s nomLeu3.chr10 63859781 53 - 106955855 gagacaaggttcttgaggacacaacatttaagctggggcctgacagatgagtt i nomLeu3.chr10 C 0 C 0 s macNem1.NW_012011689v1 4488911 53 - 13342542 GAGACAAAGttcttgaggacacagcatttcagctggggcctgacaggtgagtt i macNem1.NW_012011689v1 I 3571 C 0 s cerAty1.NW_012005268v1 5419706 53 + 7714307 GAGACAAAGttcttgaggacacagcatttaagctggggcctgacaggtgagtt i cerAty1.NW_012005268v1 I 3566 C 0 s chlSab2.chr6 29226936 53 + 50890351 GAGACAAAGttcttgaggacacagcatttaagctggggcctgacaggtaagtt i chlSab2.chr6 I 3563 C 0 s manLeu1.NW_012102454v1 850538 53 - 2385121 gagacaaagttcttgaggacacagcatttaagctggggcctgacaggtgagtt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2286162 53 + 4274983 gagacaaggttcttgaggacacagcatttaagctggggcctgacaggtgagtt i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3928023 2114 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I e saiBol1.JH378197 5355488 5653 + 8899380 I e calJac3.chr22 28516628 3259 + 49145316 I e macFas5.chr19 34617282 3894 + 59248254 I e rheMac8.chr19 30164383 3924 + 53671032 I a score=216826.000000 s hg38.chr19_GL383574v1_alt 32649 27 + 155864 agaattagccacatgtagaggCTATCT s panTro5.chr19 36101266 27 + 61309027 agaattagccacatgtagaggCTATCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39847325 27 + 64411610 agaattagccacatgtagaggCTATCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6265079 27 - 8369475 agaattagccacatgtagaggCTATCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63859834 27 - 106955855 agaattagccacatgtagaggCTGTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30168307 27 + 53671032 agaaTTAGCCACATGTAGAGGCTATCT i rheMac8.chr19 I 3924 C 0 s macFas5.chr19 34621176 27 + 59248254 agaaTTAGCCACATGTAGAGGCTATCT i macFas5.chr19 I 3894 C 0 s macNem1.NW_012011689v1 4488964 27 - 13342542 agaattagccacatggagaggCTATCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5419759 27 + 7714307 agaattagccacatgTAGAGGCTATCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29226989 27 + 50890351 agaattagccGCATGTAGAGGCTATCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 850591 27 - 2385121 agaattagccacatgtagaggCTATCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2286215 27 + 4274983 agaattagccacatgtagaggCTATCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28519887 27 + 49145316 aaaaaTAGCCGCATGTAGAGGCTATCT i calJac3.chr22 I 3259 C 0 s saiBol1.JH378197 5361141 27 + 8899380 aaaaTGAGCCACATGTAGaggctatct i saiBol1.JH378197 I 5653 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3928023 2114 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4572084 1691 - 122678785 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I a score=52303.000000 s hg38.chr19_GL383574v1_alt 32676 12 + 155864 AGGAAGATGTTA- s panTro5.chr19 36101293 12 + 61309027 AGGAAGATGTTA- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39847352 12 + 64411610 AGGAAGATGTTA- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6265106 12 - 8369475 AGGAAGATGTTA- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63859861 12 - 106955855 AGGAAGATGTTA- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30168334 12 + 53671032 AGGAAGATGtta- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34621203 12 + 59248254 AGGAAGATGtta- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4488991 12 - 13342542 AGGAAGATGttg- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5419786 12 + 7714307 AGGAAGATGtta- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29227016 12 + 50890351 AGGAAGATGtta- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 850618 12 - 2385121 AGGAAGATGtta- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2286242 12 + 4274983 AGGAAGATGTTA- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28519914 1 + 49145316 C------------ i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5361168 1 + 8899380 c------------ i saiBol1.JH378197 C 0 C 0 s canFam3.chr1 4573775 13 - 122678785 aaaaaAATGTTTC i canFam3.chr1 I 1691 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3928023 2114 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e aotNan1.NW_018505377v1 319713 2365 - 4471408 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I a score=158671.000000 s hg38.chr19_GL383574v1_alt 32688 27 + 155864 AGGCTATCTGTTATGTTCAGTTAC-ATA--- s panTro5.chr19 36101305 27 + 61309027 AGGCTATCTGTTATGTTCAGTTAC-ATA--- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39847364 27 + 64411610 AGGCTATCTGTTATGTTCAGTTAC-ATA--- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6265118 27 - 8369475 AGGCTATCTGTTATGTTCAGTTAC-ATA--- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63859873 27 - 106955855 AGGCTGTCTGTTATGTACAGTTAC-ATA--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30168346 24 + 53671032 aggctatctcttatgtacagttac------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34621215 24 + 59248254 aggctatctcttatgtacagttac------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4489003 24 - 13342542 aggctatctcttatgtacagttac------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5419798 24 + 7714307 aggctatctcttatgtacagttac------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29227028 24 + 50890351 aggctatctcttgtgtacagttac------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 850630 24 - 2385121 aggctatctcttatgtacagttac------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2286254 24 + 4274983 AGGCTATCTCTTATGTACAGTTAC------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28519915 14 + 49145316 ----------TTATGTACAGTTAC------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5361169 14 + 8899380 ----------ttatgtacagttac------- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 322078 25 - 4471408 AGGCTATCTCTTATGTACAGTTACA------ i aotNan1.NW_018505377v1 I 2365 C 0 s canFam3.chr1 4573788 27 - 122678785 AGGATCTTTCTTGTCTACAGTTTC----AAA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3928023 2114 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e cebCap1.NW_016107633v1 1570187 4304 - 2680843 I a score=1061086.000000 s hg38.chr19_GL383574v1_alt 32715 110 + 155864 AGAGAGATCCTTTGTAAATGTGTTTTGCTTTGTA---ATAAACCTTCTAAGGAGCCAGTATTG---TTTTG---TTATTACATCACTCTCTAAAATTTCAAATTGCCTTTTTGGTTTTA s panTro5.chr19 36101332 110 + 61309027 AGAGAGATCCTTTGTAAATGTGTTTTGCTTTGTA---ATAAACCTTCTAAGGAGCCAGTATTG---TTTTG---TTATTACATCACTCTCTAAAATTTCAAATTGCCTTTTTGGTTTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39847391 110 + 64411610 AGAGAGATCCTTTGTAAATGTGTTTTGCTTTGTA---ATAAACCTTCTAAGGAGCCAGTATTG---TTTTG---TTATTACATCACTCTCTAAAATTTCAAATTGCCTTTTTGGTTTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6265145 110 - 8369475 AGAGAGATCCTTTGTAAATGTGTTTTGCTTTGTA---ATAAACCTTCTAAGGAACCAGTATTG---TTTTG---TTATTACATCACTCTCTCAAATTTCAAATTGCCTTTTTGGTTTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63859900 110 - 106955855 AGAGAGACCCTTTGTAAATGTGTTTTGCTTTGTA---ATAAACCTTCTAAGGAGCCAGTATTG---TTTTG---TTATTACATCACTATCTAAATTTTCAAATTGCCTTTTTGGTTTTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30168370 110 + 53671032 agagagatcctttgtaaatgtgttttgctttgta---ataaaccttctaaggagccagtattg---ttttg---ttattacatccctatctaaatattcaaattacctttttggtttta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34621239 110 + 59248254 agagagatcctttgtaaatgtgttttgctttgta---ataaaccttctaaggagccagtattg---ttttg---ttattacatccctatctaaatattcaaattacctttttggtttta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4489027 110 - 13342542 agagagatcctttgtcaatgtgttttgctttgta---ataaaccttctaaggagccagtattg---ttttg---ttattacatccctatctaaatattcaaattacctttttggtttta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5419822 110 + 7714307 agagagatcctttgtaaatgtgttttgctttgta---ataaaccttctaaggagccagtattg---ttttg---ttattacatccctatctaaatattcaaattacctttttggtttta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29227052 110 + 50890351 agagagatcctttgtaaatgtgttttgctttgta---ataaatcttctaaggagccagtattg---ttttg---ttattacatccctatctaaatattcaaattgcctttttggtttta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 850654 110 - 2385121 agagagatcctttgtaaatgtgttttgctttgta---ataaaccttctaaggagccagtattg---ttttg---ttattacatccctatctaaatattcaaattacctttttggtttta i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2286278 108 + 4274983 AGAGAGATCCTTTGTAAATGTGTTTTACTTTGTA-----AAACCTTCTAAGGAGCCAGTATTG---TTTTG---TTATTACATCCCTATCTAAATTTTCAAATTGCCTTTTTGGTTTTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28519929 110 + 49145316 AGA-AAATGCTTTGTAAATGTGTTTTGCTTCGTA---AT-AACTTTCTAAGGAGTCAGTATTG-TTTTTTG---TTATTACATCTTTATCTAAATTTTCAAATTGCTTTCTTGATTTTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5361183 115 + 8899380 agagaaatcctttgtaagtgtgttttgctttgtaattat-aactttctaaggagccagtattgtttttttg---ttactacatctttatctaaattttcaaattgcttttctggtttta i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1574491 115 - 2680843 agagaaaTCCTTTGTAAATATGTTTTGCTTTGTA---AT-AACTTTCTAAGGAGCCAGTATTTCTTTTTTGTTATTATTACATCTTTATCTAAATTTTCAAATTGCTTTTCTGGTTTTA i cebCap1.NW_016107633v1 I 4304 C 0 s aotNan1.NW_018505377v1 322103 111 - 4471408 -AAGAAATCCTTTGTAAATGTGTTTTGCTTTGTA---AT-AACTTTCTAAGGAGCCAGTATTGTTTTTTTG---TTATTACATCTTTATCTAAATTTTCAAATTGCTTTTCTGGTTTTA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4573815 85 - 122678785 ------AATCCTTGTGGATAGGTTTAGCATTATT---AC-------------------TGTTG---TTTTG---TTATCACCTCACCATCTGAATTTTTTTTTTTTTTtttttttttta i canFam3.chr1 C 0 I 1189 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3928023 2114 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=965766.000000 s hg38.chr19_GL383574v1_alt 32825 97 + 155864 TAAGGACAAGATGGGCTCTTAACAAGATGGCTTTGGGGTTTTTTCAGTCGAAGATGATGTAACCTCTAGAGTTAAGTGCGAAGAAGTTGA-TTTTGAG s panTro5.chr19 36101442 97 + 61309027 TAAGGACAAGATGGGCTCTTAACAAGATGGCTTTGGGGTTTTTTCAGTCGAAGATGATGTAATCTCTAGAGTTAAGTGCGAAGAAGTTGA-TTTTGAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39847501 97 + 64411610 TAAGGACAAGATGGGCTCTTAACAAGATGGCTTTGGGGTTTTTTCAGTCGAAGATGATGTAATCTCTAGAGTTAAGTGCGAAGAAGTTGA-TTTTGAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6265255 98 - 8369475 TAAGGACAAGATGGGCTCTTAACAAGATGGCTTTGGGGTTTTTTCAGTCGAAGATGATGTAACCTCTAGAGTTAAGTGCGAAGAAGTTGATTTTTGAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63860010 97 - 106955855 TAAGGACAAGATGGGCTCTTAACAAGATGGCTTTGGGGTTTTTTCAGTCGAAGATGATGTAACCTCTAGAGTTAAGTGGGAAGAAGTTGA-TTTTGAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30168480 97 + 53671032 taaGGACCAGATGGGCTCTTAACAAGATGGCTTTGGGGTTTTTTCAGTCGAAGATGATGTAACCTCTAGAGTTAAGTGCGAAGAAGTTGA-TTTTGAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34621349 97 + 59248254 taaGGACCAGATGGGCTCTTAACAAGATGGCTTTGGGGTTTTTTCAGTCGAAGATGATGTAACCTCTAGAGTTAAGTGCGAAGAAGTTGA-TTTTGAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4489137 97 - 13342542 taaGGACAAGATGGGCTCTTAACAAGATGGCTTTGGGGTTTTTTCAGTCGAAGATGATGTAACCTCTAGAGTTAAGTGCGAAGAAGTTGA-TTTTGAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5419932 97 + 7714307 taaGGACAAGATGGGCTCTTAACAAGATGGCTTTGGGGTTTTTTCAGTCGAAGATGATGTAACCTCTAGAGTTAAGTGCGAAGAAGTTGA-TTTTGAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29227162 97 + 50890351 taaGGACAAGATGGGCTCTTAACAAGATGGCTTTGGGGTTTTTTCAGTCGAAGATGATGTAACCTCTAGAGTTAAGTGCGAAGAAGTTGA-TTTTGAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 850764 97 - 2385121 taaGGACAAGATGGGCTCTTAACAAGATGGCTTTGGGGTTTTTTCAGTCGAAGATGATGTAACCTCTAGAGTTAAGTGCGAAGAAGTTGA-TTTTGAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2286386 97 + 4274983 GAAGGACAAGATGGGCTCTTAACAAGATGGCTTTGGGGTTTTTTCAGTTGAAGATGATGTAACCTCTAGAATTAAGTGCAAAGAAGTTCA-TTTTGAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28520039 92 + 49145316 TAAGGAAAAGATCAGCCCTT---AAGATGAC--TGGAGTTTTTTCAGTTGAAGATGATGTGACCTCTAGAGTTAAGTGGGAAGAAGTTGA-TTTTGAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5361298 95 + 8899380 taaGGAAAAGATCAGCTCTTAACAAGATGAC--TGGGGTTTTTTCGGTTGAAGATGATGTAACCTCTAAAGTTAAGTGGGAAGAAGTTGA-TTTTGAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1574606 95 - 2680843 TAAGGAAAAGATTGACTCTTAACAGGATGAC--TGGGGTTTTTTCAGTTGAAGATGATGTAACCTCTAGAGTTAAGTGGGAAGAAGTTGA-TTTTGAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 322214 95 - 4471408 TAAGGAAAAGATCGGCTCTTAACAAGATGAC--TGGGGTTTTTTCGGTTGAAGATGATGTAACCTCTAGAGTTAAGTGGGAAGAAGTTGA-TTTTGAG i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3928023 2114 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4573900 1189 - 122678785 I a score=674947.000000 s hg38.chr19_GL383574v1_alt 32922 67 + 155864 AATATATTGCAGAA--------GGTGCAAGGAACGTCATCTGGGTTATGACCTCTGGAAGTGGAGGTAGTTTTTT s panTro5.chr19 36101539 67 + 61309027 AATATATTGCAGAA--------GGTGCAAGGAACGTCATCTGGGTTATGACCTCTGGAAGTGGAGGTAGTTTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39847598 67 + 64411610 AATATATTGCAGAA--------GGTGCAAGGAACGTCATCTGGGTTATGACCTCTGGAAGTGGAGGTAGTTTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6265353 67 - 8369475 AATATATTGCAGAA--------GGTGCAAGGAACGTCATCTGGGTTATGACCTCTGGAAGTGGAGGTAGTTTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63860107 67 - 106955855 AACATATTGCAGAA--------GGTACAAGGAACGTCATCTGGGTTATGACCTCTGGAAGTGGAGGTAGTTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30168577 67 + 53671032 AATATGTTGCAGAA--------GGTGAGAGGAACGTCATCTGGATTATGACCTCTGGAGGTGGAGGTAATTTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34621446 67 + 59248254 AATATGTTGCAGAA--------GGTGAGAGGAACGTCATCTGGATTATGACCTCTGGAGGTGGAGGTAATTTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4489234 67 - 13342542 AATATGTTGCAGAA--------GGTGAGAGGAACGTCAACTGGATTATGACCTCTGGAGGTGGAGGTAATTTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5420029 67 + 7714307 AATATGTTGCAGAA--------GGTGAGAGGAACGTCATCTGGATTATGACCTCTGGAGGTGGAGGTAATTTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29227259 67 + 50890351 AATATGTTGCAGAA--------GGTGAGAGGAACGTCATCTGGATTATGACCTCTGGAGGTGGAGGTAATTTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 850861 67 - 2385121 AATATGTTGCAGAA--------GGTGAGAGGAACGTCATCTGGATTATGACCTCTGGAGGTGGAGGTAATTTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2286483 67 + 4274983 AATATGTTGCAGAA--------GGTGAGAGGAAGGTCATCTGGGTTATGACCTCTGGAGGTGGAGGTAATTTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28520131 66 + 49145316 GATATGTTGCAAAA--------GGTGAAAGGAACATCATCTGAGTTATGAACTCTGGAGGTGGAGGTTG-TTTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5361393 66 + 8899380 GCTGTATTGCAGAA--------GGTGAAAGGAACATCATCTGAGTTATGAACTGTGGAGGTGGAGGTAG-TTTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1574701 66 - 2680843 GATATGTTGCAAAA--------GTTGAAAGGAACATCATCTGAGTTATGAACCGTGGAGGTGGAGGTAG-TTTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 322309 66 - 4471408 GATATGTTACAAAA--------GTTGAAAGGAACATCATCTGAGTTGTGAACTCTGGAAGTGGAGGTAG-TTTTT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4575089 75 - 122678785 AAAATATTGAAGAATGTTGAATGGTGAAAGGAAAGTCACCTGGGTTGTGAACTCTGGAGGTGGAGGTGGGTTTTT i canFam3.chr1 I 1189 I 182 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3928023 2114 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=1174025.000000 s hg38.chr19_GL383574v1_alt 32989 113 + 155864 GTCATTGGGTCGCCAGTGCTTGGCATGTGATCTG---TGAGGTGATCGAGAATATTGCAGACACAAGGGC------------------AGGAGTAATGCCTCTGTTAGGGGTGTTAA----GTTCGT--AGTGGGTTCAG s panTro5.chr19 36101606 113 + 61309027 GTCATTGGGTCGCCAGTGCTTGGCATGTGATCTG---TGAGGTGATCGAGAATATTGCAGACACAAGGGC------------------AGGAGTAATGCCTCTGTTAGGGGTGTTAA----GTTCGT--AGTGGGTTCAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39847665 113 + 64411610 GTCATTGGGTCGCCAGTGCTTGGCATGTGATCTG---TGAGGTGATCGAGAATATTGCAGACACAAGGGC------------------AGGAGTAATGCCTCTGTTAGGGGTGTTAA----GTTCGT--AGTGGGTTCAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6265420 113 - 8369475 GTCATTGGGTCGCCAGTGCTTGGCATGTGATCTG---TGAGGTGATCGAGAATATTGCAGACACAAGGGC------------------AGGAGTAATGCCTCTGTTAGGGGTGTTAA----GTTCGT--AGTGGGTTCAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63860174 113 - 106955855 GTCATTGGGTCACCAGTGCTTGGCATGTGATCTG---TGAGGTGATTGAGAATATTGCAGACACAAGGGC------------------AGGAGTAATGCCTCTGTTAGGGGTGTTAA----GTTCAT--AGTGGGTTCAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30168644 113 + 53671032 GTCATTGGGTCACCAGTGCTTGGCATGTGATCTG---TAAGGTGATTGAGAATATTGCAGACACCAGGGT------------------AGGAGTAAAGCCTCTGTTAGGGGTGTTAA----GTTCGT--AGTGGGTTCAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34621513 113 + 59248254 GTCATTGGGTCACCAGTGCTTGGCATGTGATCTG---TAAGGTGATTGAGAATATTGCAGACACCAGGGT------------------AGGAGTAAAGCCTCTGTTAGGGGTGTTAA----GTTCGT--AGTGGGTTCAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4489301 113 - 13342542 GTCATTGGGTCACCAGTGCTTGGCATGTGATCTG---TAAGGTGATTGAGAATATTGCAGACACCAGGGT------------------AGGAGTAAAGCCTCTGTTAGGGGTGTTAA----GTTCGT--AGTGGGTTCAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5420096 113 + 7714307 GTCACTGGGTCACCAGTGCTTGGCATGTGATCTG---TAAGGTGATTGAGAATATTGCAGACACCAGGGT------------------AGGAGTAAAGCCTCTGTTAGGAGTGTTAA----GTTCGT--AGTGGGTTCAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29227326 113 + 50890351 GTCATTGGGTCACCAGTGCTTGGCATGTGATCTG---TAAGGTGATTGAGAATATTGCAGACACCAGGGT------------------AGGAGTAAAGCCTCTGTTAGGGGTGTTAA----GTTCGT--AGTGGGTTCAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 850928 113 - 2385121 GTCATTGGGTCACCAGTGCTTGGCATGTGATCTG---TAAGGTGATTGAGAATATTTCAGACACCAGGGT------------------AGGAGTAAAGCCTCTGTTAGGGGTGTTAA----GTTCGT--AGTGGGTTCAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2286550 113 + 4274983 GTCATTGGGTCACCAGTGCTTGGCATGTGATCTG---TGAGGTAATTGAGAATATTGCAGACACCAGGGC------------------AGGAGTAAAGCCTCTGTTAGGAGTGTTAA----GTTCGT--AGTGGGTTCAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28520197 131 + 49145316 GTCATCCAGTCACCAGTGCTTGGCATGTGATCCA---TGAGGTGATTGAGAATATTGAAGACACAAGGGCAAGAGTAATGCTTCTGTTAGGAGTAATGCCTCTGTTAGGGATGTTAG----GTTTGT--AGTGGGTACAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5361459 113 + 8899380 GTCATGGAATCAACAGTGCTTGGCATGTGATCCA---TGAGGTGATTGAGAATATTGAGGACACAAGGGC------------------AGGAGTAATGCCTCTGTTAGGGGTGTTAG----GTTTGT--AGTGAGTACAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1574767 131 - 2680843 GTCATCAAGTCAACAGTGCTTGGCATGTGATCCA---TGAGGCGATTGAGAATATTGAAAACACAAGGGCAGGAGTAATGCCTCTGTTAGGAGTAATGCCTCTGTTAGGGGTGTTAG----GTTTGT--AGTGGGTACAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 322375 131 - 4471408 GTCATCGAGTCATCAGTGCTTGGCATGTGATCCA---TGAGGTGATTGAGAATATTGAAGACACAAGGGCAGGAGTAATGCCTCTGTTAGGAGTAATGCCTCTGTTAGGGGTGTTAG----GTTTGT--AGTGGGTACAG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4575346 120 - 122678785 GTCTTTGGATTGCCAGTGATTGGTGTGTGATAAGTGCTGAGGCGATTGAGAATATTGCAGAGAGATGGTT------------------GGTAGTAATG--TCTGTTAGGGGTGACAGTAATGTCTGTTAATTGGATACAG i canFam3.chr1 I 182 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3928023 2114 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=2313376.000000 s hg38.chr19_GL383574v1_alt 33102 204 + 155864 GAAGAGATGGTGGAGGCTGAGGGACAGATGTTTTCATTCAGTGCAGTAATATTTGCTAACAGGAAGAAAGTAGTGTGGGTAAGGGTGAAGAAGGGGCCAGAGAAGAGAGTGCAGATGTGCAAAAAGTGAGAGTTTGTGGAAGCAGGCCGTGATGTGGTTCCAAGAGCTGGACTGTCGAATCTTA-TTTTTGTAAAGCTCTGCTCT s panTro5.chr19 36101719 204 + 61309027 GAAGAGATGGTGGAGGCTGAGGGACAGATGTTTTCATTCAGTGCAGTAATATTTGCTAACAGGAAGAAAGTAGTGTGGGTAAGGGTGAAGAAGGGGCCAGAGAAGAGAGTGCAGATGTGCAAAAAGTGAGAGTTTGTGGAAGCAGGCCGTGATGTGGTTCCAAGAGCTGGACTGTCGAATCTTA-TTTTTGTAAAGCTCTGCTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39847778 204 + 64411610 GAAGAGATGGTGGAGGCTGAGGGACAGATGTTTTCATTCAGTGCAGTAATATTTGCTAACAGGAAGAAAGTAGTGTGGGTAAGGGTGAAGAAGGGGCCAGAGAAGAGAGTGCAGATGTGCAAAAAGTGAGAGTTTGTGGAAGCAGGCCGTGATGTGGTTCCAAGAGCTGGACTGTCGAATCTTA-TTTTTGTAAAGCTCTGCTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6265533 204 - 8369475 GAAGAGATGGTGGAGGCTGAGGGACAGATGTTTTCATTCAGTGCGGTAATATTTGCTAACAGGAAGAAAGTAGTGTGGGTAAGGGTGAAGAAGGGGCCAGAGAAGAGAGTGCAGATGTGCAGAAAGTGAGAGTTTGTGGAAGCAGGCCGTGATGTGGTTCCAAGAGCTGGACTGTCAAATCTTA-TTTTTGTAAAGCTCTGCTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63860287 204 - 106955855 GAAGAGATGGTGGAGGCTGAGGAACAGATGTTTTCATTCAGTGCAGTAATATTTGCTAACAGGAAGAAAGTAGTGTGGGTAAGGGTGAAGAAGGGGCCAGAGAAGAGAGTGCAGATGTGCAGAAAGTGAGAGTTTGTGGAAGCAGGCTGTGATGTGGTTCCAAGAGCTGGACTGTCGAATCTTA-TTTTTATAAAGCTCTGCTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30168757 201 + 53671032 GAAGAGATGGTGGAGGCTGAGGGACAGATGTTTTTATTCGGTGCAGTTATGTTTGCTAACAGGAAGCAAGTAGTGTGGGTAAGGGTGAAGAAG--GCCAGAGAAG-GAGTGTAGACGTGCGGAAAGTGAGAGTTTGTGGAAGCAGGCTGTGATGTGGTTCCAAGAGCTGGACTGTCGAATCTTA-TTTTTGTAAAGCTCTGCTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34621626 201 + 59248254 GAAGAGATGGTGGAGGCTGAGGGACAGATGTTTTTATTCGGTGCAGTAATATTTGCTAACAGGAAGCAAGTAGTGTGGGTAAGGGTGAAGAAG--GCCAGAGAAG-GAGTGTAGACGTGCGGAAAGTGAGAGTTTGTGGAAGCAGGCTGTGATGTGGTTCCAAGAGCTGGACTGTCGAATCTTA-TTTTTGTAAAGCTCTGCTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4489414 201 - 13342542 GAAGAGATGGTGGAGGCTGAGGGACAGATGTTTTTATTCGGTGCAGTAATATTTGCTAACAGGAAGCAAGTAGTGTGGGTAAAGGTGAAGAAG--GCCAGAGAAG-GAGTGTAGACGTGCGGAAAGTGAGAGTTTGTGGAAGCAGGCTGTGATGTGGTTCCAAGAGCTGAACTGTCGAATCTTA-TTTTTGTAAAGCTCTGCTCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5420209 201 + 7714307 GAAGAGATGGTGGAGGCTGAGGGACAGATGTTTTTATTCGGTGCAGTAATATTTGCTAACAGGAAGAAAGTAGTGTGGGTAAGGGTGAAGAAG--GCCAGAGAAG-GAGTGTAGACGTGCGGAAAGTGAGAGTTTGTGGAAGCAGGCTGTGATGTGGTTCCAAGAGCTGAACTGTCGAATCTTA-TTTTTGTAAAGCTCTGCTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29227439 201 + 50890351 GAAGAGATGGTGGAGGCGGAGGGACAGATGTTTTCATTCGGTGCAGTAATATTTGCTAACAGGAAGAAAGTAGTGTGGGTAAGGGTGAAGAAA--GCCAGAGAAG-GAGTGCAGACGTGCGGAAAGTGAGAGTTTGTGGAAGCAGGCTGTGATGTGGTTCCAAGAGCTGGACTGTCGAATCTTA-TTTTTGTAAAGCTCTGCTCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 851041 201 - 2385121 GAAGAGATGGTGGAGGCTGAGGGACAGATGTTTTTATTCGGTGCAGTAATATTTGCTAACAGGAAGAAAGTAGTGTGGGTAAGGGTGAAGAAG--GCCAGAGAAG-GAGTGTAGACGTGCGGAAAGTGAGAGTTTGTGGAAGCAGGCTGTGATGTGGTTCCAAGAGCTGGACTGTCGAATCTTA-TTTTTGTAAAGCTCTGCTCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2286663 203 + 4274983 GAAAAGATGGTGGAGGCTGAGGGACAGATGTTTTCATTCGGTGCAGTAATATTTGCTAACAGGAAGAAAGCAGTGTGGGTAAGGGTGAAGAAGGCGCCGGAGAAG-GAGTACAGACATGCGGAAAGTGAGAGGTTGTGGAAGCAGGCTGTGATGTGGTTCCAAGAGCTGGACTGTCGAATCTTA-TTTTTGTAACGCTCTGCTCt i colAng1.NW_012111697v1 C 0 I 317 s calJac3.chr22 28520328 201 + 49145316 GAAGAGGTGGTGGAGGCTGAGGGACCAATGTTTTAATTCAGTGCAG---TATTTGCTAGCAGGAAGAAAGTAATGTGGGTAAGGGTGAAGAAGAGGCCAGAGAAGAGAGCGCAGATGTGCAGAAAGTGAGAGTTTGGGGAAGCAGGCTGTGATGTGCTTCCAAGAGCCAGACTGTTGAATGTTA-TTTTTGTAAAGCTCTGCTCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5361572 201 + 8899380 GAAGAGATGGTGGAGGCTGAGAGACCAATGTTTTCATTCAGTGCAG---TATTTGCTAGCAGGAAGAAAGTAATGTGGGTAAGGGTGAAGAAGGGGCCAGAGAAGAGATTGCAGATGTGCAGAAAGTGAGAGTTTGGGGAAGCAGGCTGTGATGTGCTTCCAAGAGCCAGACTGTCGAATGTTA-TTTTTGTAAAGCTCTGCTCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1574898 201 - 2680843 GAAGAGATGGTGGAGGCTGAGAGACCAATGTTTTCATTCAGTGCAG---TATTTGCTAGCAGGAAGAAAGTAATGTGGGTAAGGGTAAAGAAGGGGCCAGAGAAGAGAGTGCAGATGTGCAGAAAGTGTGAGTTTGGGGAAGCAGGCTGTGACGTGCTTCCAAGAGCCAGACTGTTGAATGTTA-TTTTTGTAAAGCTCTGCTCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 322506 202 - 4471408 GAAGAGATGGTGGAGGCTGAGGGACCAATGTTTTCATTCAGTGCAG---TATTTGCTAGCAGGAAGAAAGTAATGTGGGTAAAGGTGAAGAAGGGGCCAGAGAAGAGAGTGCAGATGTGCAGAAAGTGAGAGTTTGGGGAAGCAGGCTGTGATGTGCTTCCAAGAGCCAGACTGTCGAATGTTATTTTTTGTAAGGCGCTGCTCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3930137 202 - 30143674 GAAGAGGTGGCAGAGGCAGGGGGACAGACATTTTCATTTAGTGCAGTAATATTTGCTAATAGGAAGAAAGTAGTGTGGGAAAGGG-GAAGAAGGGGCCAGAGAAGAGAGTACAGGTATGCAGAAAGCGGAGGTCTGTGGAAGCAGACCGTGATGCGGTTCAAAGAGCAAACCTGTAGAATCTT--CCTTTGTAAAGCTCCACTCC i micMur3.chr22 I 2114 C 0 s canFam3.chr1 4575466 178 - 122678785 GAAGAGATGATAGAGTCC-AGAGACAGATGTTTTCTCTCAGTACGGTAATATTCCCTAACA------AAGTAATGTGGGTGAGAATGAAGACGGGGCCAAAGAGGATAGTGCAGGTGTATAGAAAGTGAAGCTTTGTAGGGGCAGTGTTTGATGTGATTC-ACAAGC----------AGTCCCG-TGT--------CCCTCCTCC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=3148443.000000 s hg38.chr19_GL383574v1_alt 33306 323 + 155864 TAAGT-AAAAAACCCAGAGTCACCTTTCTACCATGC-TACCTTCAGGGCCTGAGCAAGAGTACTGCGTTGTAGAAGAGGTGGTGC-T-----------TTTTAGTATTTAAGTAATTAAACCTTCC--TTGTTGTATTAAATCCATATATAATACCTTATTCCAACATATCTCAGATAGTTTCTGTATCTCAGATAGTTTCAGCAAGAGTTTGTGTATGGCACCGAATG---GACAAGAGCTGTACATA-----------TATATAAATGTCAGAAAGAGAAGAAAAATACTA---ACTGTAACT-------TTTTGGTTTCCTGGTTTGCTGCTTTTGCATGTAGACTG-TTCTTAAAT-ATGC s panTro5.chr19 36101923 323 + 61309027 TAAGT-AAAAAACCCAGAGTCACCTTTCTACCATGC-TACCTTCGGGGCCTGAGCAAGAGTACTGCGTTATAGAAGAGGTGGTGC-T-----------TTTTAGTATTTAAGTAATTAAACCTTCC--TTGTTGTATTAAATCCATATATAATACCTTGTTCCAACATATCTCAGATAGTTTCTGTATCTCAGATAGTTTCAGCAAGAGTTTGTGTATGGCACCGAATG---GACAAGAGCTGTACATA-----------TATATAAATGTCAGAAAGAGAAGAAAAATACTA---ACTGTAACT-------TTTTGGTTTCCTGGTTTGCTGCTTTTGCATGTAGACTG-TTCTTAAAT-ATGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39847982 323 + 64411610 TAAGT-AAAAAACCCAGAGTCACCTTTCTACCATGC-TACCTTCGGGGCCTGAGCAAGAGTACTGCGTTATAGAAGAGGTGGTGC-T-----------TTTTAGTATTTAAGTAATTAAACCTTCC--TTGTTGTATTAAATCCATATATAATACCTTATTCCAACATATCTCAGATAGTTTCTGTATCTCAGATAGTTTCAGCAAGAGTTTGTGTATGGCACCGAATG---GACAAGAGCTGTACATA-----------TATATAAATGTCAGAAAGAGAAGAAAAATACTA---ACTGTAACT-------TTTTGGTTTCCTGGTTTGCTGCTTTTGCATGTAGACTG-TTCTTAAAT-ATGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6265737 305 - 8369475 TAAGT-AAAAAACCCAGAGTCACCTTTCTACCATGC-TACCTTCAGGGCCTGAGCAAGAGTACTGCGTTATAGAAGAGGTGGTGC-T-----------TTTTAGTATTTAAGTAATTAAACCTTCC--TTGTTGTATTAAATCCATATGTAATACCTTATTCCAACA------------------TATCTCAGATACTTTCAGCAAGAGTTTGTGTATGGCACCAAATG---GACAAGAGCTGTACATA-----------TATATAAATGTCAGAAAGAGAAGAAAAATACTA---ACTGTAACT-------TTTTGGTTTCCTGGTTTGCTGCTTTTGCATGTAGACTG-TTCTTAAAT-ATGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63860491 302 - 106955855 TAAGT-AGAAAACCCAGAGTCAGCTTTCTACCATTC-TACCTTCAGGGCCTGGGCAAGAGTACTGCGTTATAGAAGAGATGGTGC-T-----------TTTTAGTATTTAAGTAATTAAA----CC--TTGTTGTATTAAATCCATGTATAATACCTTATTCCAAGA------------------TATCTCAGATAGTTTCAGCAAGAGTTTGTGTATGGCACCAAGTG---GACAAGAGCTGTACTTA-----------TGTATAAATGTCAGAAAGAGAAGAAAAGTACTA---ACTGTAACT-------TTTTTGTTTCCTGGTTTGCTGCTTTTGCATGTAGACTGTTTTTTAAAT-ATGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30168958 303 + 53671032 TAAGT-AAAAAACCCAGAGTCAGCTTTCTACCATTCTTACCTTTAGGGCCTGGGAAAGAGTACTGTGTTATAGAAGAGATGGTGC-T-----------TTTTAGTATTTAAGTAATTAAA----CC--TTGTTGTATTAAATCCATGTATAATACCTTATTCCAAGAG------------------ATCTCAGATAGTTTCAGCAAGAGTTTGTGTATGGCACCAAATG---GACAAGAGCCGTACTTA-----------TGTATAAATGTCAGAAGGAGAAGAAAAATAGTA---ACTGTAACT-------TTTTTGTTTCCTGGTTTGCTACTTTTGCATGTAGACTGTTTTTTAAAT-ATGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34621827 303 + 59248254 TAAGT-AAAAAACCCAGAGTCAGCTTTCTACCATTCTTACCTTTAGGGCCTGGGAAAGAGTACTGTGTTATAGAAGAGATGGTGC-T-----------TTTTAGTATTTAAGTAATTAAA----CC--TTGTTGTATTAAATCCATGTATAATACCTTATTCCAAGAG------------------ATCTCAGATAGTTTCAGCAAGAGTTTGTGTATGGCACCAAATG---GACAAGAGCCGTACTTA-----------TGTATAAATGTCAGAAGGAGAAGAAAAATAGTA---ACTGTAACT-------TTTTTGTTTCCTGGTTTGCTACTTTTGCATGTAGACTGTTTTTTAAAT-ATGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4489615 303 - 13342542 TAAGT-AAAAAACCCAGAGTCAGCTTTCTACCATTCTTACCTTTAGGGCCTGGGAAAGAGTACTGTGTTATAGAAGAGATGGTGC-T-----------TTTTAGTATTTAAGTAATTAAA----CC--TTGTTGTATTAAATCCATGTATAATACCTTATTCCAAGAG------------------ATCTCAGATAGTTTCAGCAAGAGTTTGTGTATGGCACCAAATG---GACAAGAGCCGTACTTA-----------TGTATAAATGTCAGAAGGAGAAGAAAAATAGTA---ACTGTAACT-------TTTTTGTTTCCTGGTTTGCTACTTTTGCATGTAGACTGTTTTTTAAAT-ATGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5420410 321 + 7714307 TAATT-AAAAAACCCAGAGTCAGCTTTCTACCATTCTTACCTTTAGGGCCTGGGAAAGAGTACTGTGTTATAGAAGAGATGGTGC-T-----------TTTTAGTATTTAAGTAATTAAA----CC--TTATTGTATTAAATCCATGTATAATACCTTATTCCAAGAGATCTCAGATAGTTTCTATATCTCAGATAGTTTCAGCAAGAGTTTGTGTATGGCACCAAATG---GACAAGAGCCGTACTTA-----------TGTATAAATGTCAGAAGGAGAAGAAAAATAGTA---ACTGTAACT-------TTTTTGTTTCCTGGTTTGCTACTTTTGCGTGTAGACTGTTTTTTAAAT-ATGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29227640 321 + 50890351 TAAGT-AAAAAACCCAGAGTCAGCTTTCTACCATTCTTACCTTTAGGGCCTGGGAAAGAGTACTGTGTTATAGAAGAGATGGTGC-T-----------TTTTAGTATTTAAGTAATTAAA----CC--TTGTTGTATTAAATCCATGTATAATACCTTATTCCAAGAGATCTCGGATGGTTTCTATATCTCAGATAGTTTCAGCAAGAGTTTGTGTATGGCACCAAATG---GACAAGAGCCGTACTTA-----------TGTATAAATGTCAGAAGGAGAAGAAAAATAGTA---ACTGTAACT-------TTTTTGTTTCCTAGTTTGCTACTTTTGCATGTAGACTGTTTTTTAAAT-ATGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 851242 321 - 2385121 TAAGT-AAAAAACCCAGAGTCAGCTTTCTACCATTCTTACCTTTAGGGCCTGGGAAAGAGTACTGTGTTATAGAAGAGATGGTGC-T-----------TTTTAGTATTTCAGTAATTAAA----CC--TTGTTGTATTAAATCCATGTATAATACCTTATTCCAAGAGATCTCAGATAGTTCCTATATCTCAGATAGTTTCAGCAAGAGTTTGTGTATGGCAACAAATG---GACAAGAGCCGTACTTA-----------TGTATAAATGTCAGAAGGAGAAGAAAAATAGTA---ACTGTAACT-------TTTTTGTTTCCTGGTTTGCTACTTTTGCATGTAGACTGTTTTTTAAAT-ATGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2287183 318 + 4274983 TAAGT-AAAAAACCCAGAATCAGCCTTCTACCATTCTTACCTTTCAGGCCTGGGAAACAGTACTGTGTTATAGAAGAGATGGTGC-T-----------TTTTAATATTTAAGTAATTAAA----CC-----TTGTATTAAATCCATGTATAATACCTTATTCCAAGAGATCTCAGATAGTTTCTATATCTCAGATAGTTTCAGCAAGAGTTTGTGTATGGCACCAAGTG---GACAAGAGCTGTACTTA-----------TGTATAAATGTCAGAAGGAGAAGAAAAATAGTA---ACTGTAACT-------TTTTTGTTTCCTGGTTTGCTACTTTTGCATGTAGTCTGTTTTTTAAAT-ATGC i colAng1.NW_012111697v1 I 317 C 0 s calJac3.chr22 28520529 315 + 49145316 TAAGT-AAAAAACCCAGAGTCAGCTTTCTGCCATTC-TATCTTCAGGGCTAGTGCAAGAGTACTGCATTATGGAAGATATGGTAC-T-----------TTTTAGTATTTAAGTAATTAAACCTTCC--TTGTTGTGTTAGATTCATATATAATACCTTATTCTAAGATACCTC----AGTTTCTGCATCTCAG----TTTCAGCACGGGTTCATG----------AATG---GACAAGAGCTGTACATATAAATGTCAGCTGTATAAATGTCAGAAAGAGAAGAAAAATACTG---ACTGTAACT-------TTTTTGTTTCCTAGTTTGCTGCTTTTGCATGTAGACT--TTTTTAAAT-ACGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5361773 319 + 8899380 TAAGTAAAAAAACCCAGAGTCAGCTTTCTGCCGTTC-TACCTTCAGGGCTTGTTCAAGAGTACTGCA-TATGGAAGAGATGGTGC-T-----------TTTTAGTATTTAAGTAATTAAACCTTGC--TTGTTGTGTTAAATTCATGTATAATACCTTATTCTAAGATACCTCAGATAGTTTCTGCATCTCAG----TTTCAGCAAGGGTTCGTG----------AATG---GACAAGAGCTGTACATATAAATGTCAGCTGTATAAATGTCAGAAAGAGAAGAAAAATACTA---ACTGTAACT-------TTTTTGTTTCCTAGTTTGCTGCTTTTGCATGTAGACT--TTTTTAAAT-ATGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1575099 313 - 2680843 TAAAT-AAAAAACCCAGAGTCAGCTTTCTGCCATTC-TACCTTCAGGGCTTGTTCTAGAGTACTACATTATGGAAGAGAAGGTAC-T-----------TTTTAGTATTTAAGTAATTAAACCTTCC--TTGTTGTGTTAAATTCATGTATAATACCTTATTCTAAGATACCTCAGATAGTTTCTGCATCTCAG----TTTCAGCAGGGATTCATG----------AATG---GACAAGAGCTGTACATATAAATGTCAGCTGTATAAATGTCAGAAAGAGAAGAAAAATAC---------TAACT-------TTTTTGTTTCCTAGTTTGCTGCTTTTGCATGTAGACT--TTTTTAAAT-ATGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 322708 317 - 4471408 TAAGT-AAAAAACCCAAAGTCAGCTTTCTTCCATTC-TACCTTCAGGGCTTGTGCAAGAGTACTGCATTATGGAAGAGATGGGAC-T-----------TTTTAGTATTTAAGTAATTAAACCTTCCTTTTTTTGTGTTAAATTCATATATAATACCTTATTCTAAGATAACTC----AGTTTCTGCATCTCAG----TTTCAGCAAGGGTTCATG----------AATG---GACAAGAGCTATACATATAAATGTCAGCTGTATAAATGTCAGAAAGAGAAGAAAAATACTA---ACTGTAACT-------TTCTTATTTCCTAGTTTGCTGCTTTTACATGTAGACT--TTTTTAAAT-ATGC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3930339 307 - 30143674 CAAGT-AAAAAATCCAGAGTCTACTCACTACCTTCC-TACCTTCAGAGCCTGTGCAAGGCCACTGCATTATAGATGAGATGGTGCAA-----------GCTTAGTATTTAAGTAATGAAA----CC-----TTGTGTTAAATCCATATGCAATGGCTTATTCCAA------------ATATGCTATGTCTCAGATGGTTTCAGCAAGAGTTGGTGTGTGGCACTGAATGTGCAACAAGAGCTGTACTTATG---------TGTATAAATGTCA----GAGAAGAAAAATACCA---ACTGTAACT-------TGTTTGTTTCCCGGTTTGATGCTTTTGTATGTAGGCTATTTTTAAAAT-ATGC i micMur3.chr22 C 0 I 115 s canFam3.chr1 4575644 315 - 122678785 CAAGT-GAAAAATCAAGTGTGTGCTTACTACCATCC-TACCATCAGGGTCTGTGCAAGGGTACTACATTGTAGAAGAGATAGCTT-TATAGAAGCTACTCTTAGTATTTAAGTAATTAAA----TC------------------ATATTTAACAGCTTATTCCAA------------ATATGCAGTATCTCCGGTGCTTTCAGCAAGAGTTAGTTTATGATACTGGTTGTGCAACAAGAACTGTATTTA-----------CAGATAAATATCAGAA--AGAAGAAAAATGCCATGTATTACAACTTTTCACCTTTTTCCCCCCTGGTTCAGTGCTTTTGCATATGTTATTTTTTTTAAATAATGC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=1171932.000000 s hg38.chr19_GL383574v1_alt 33629 116 + 155864 TGA-------GGTTGGGTTTGTTTTTCCCACTTTCCCATTCTATCAACAT-CAGTTGTTATTTACTCT------AAACAATCATTCTTTCATTTTATCCTAAGTGAGTTTC-TTTTATAATTTAATTCAGT s panTro5.chr19 36102246 116 + 61309027 TGA-------GGTTGGGTTTGTTTTTCCCACTTTCCCATTCTATCAACAT-CAGTTGTTATTTACTCT------AAACAATCATTCTTTCATTTTATCCTAAGTGAGTTTC-TTTTATAATTTAATTCAGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39848305 116 + 64411610 TGA-------GGTTGGGTTTGTTTTTCCCACTTTCCCATTCTATCAACAT-CAGTTGTTATTTACTCT------AAACAATCATTCTTTCATTTTATCCTAAGTGAGTTTC-TTTTATAATTTAATTCAGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266042 116 - 8369475 TGA-------GGTTGGGTTTGTTTTTCCCACTTTCCCATTCTATCAACAT-CAGTTGTTATTTACTCT------AAACAATCATTCTTTCATTTTATCCTAAGTGAGTTTC-TTTTATAATTTAATTCAGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63860793 123 - 106955855 TGAGGTTGGGGGTTGGGTTTGTTTTTCCCACTTTCCCATGCTATCAACAT-CAGTTGTTATTTACTCT------AAACAGTTATTCTTTCATTTTATCCTAAGTGAGTTTC-TTTTATAATTTAATTCAAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30169261 114 + 53671032 TGA-------AGTTGAGTTTGTTTTTCCCACTTTCCCATTCTGTCAACGT-CAGTTGTTATTTACTCT------AAGCAACCGTTCTTTCATTTTATCCT--GTTAGTTTC-TTTTATAACTTAATTCAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34622130 116 + 59248254 TGA-------AGTTGGGTTTGTTTTTCCCACTTTCCCATTCTGTCAACGT-CAGTTGTTATTTACTCT------AAGCAACCGTTCTTTCATTTTATCCTAAGTTAGTTTC-TTTTATAACTTAATTCAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4489918 116 - 13342542 TGA-------AGTTGGGTTTGTTTTTCCCACTTTCCCATTCTGTCAATGT-CAGTTGTTATTTACTCT------AAGCAACCGTTCTTTCATTTTATCCTAAGTTAGTTTC-TTTTATAACTTAATTCAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5420731 115 + 7714307 TGA-------AGTTGGGTTTGTTTTTCCCACTTTCCCATTCTGTCAACGT-CAGTTGTTATTTACTCT------AAACAACCGTTCTTTCATTTTATCCTAAGTTAGTTTC--TTTATAACTTAATTCAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29227961 114 + 50890351 TGA-------AGTTGGGTTTGTTTTTCCCACTTTCCCATTCTGTCAACGT-CAGTTGTTATTTACTCT------AAACAACCGTTCTTTCATTTTATCCT--GTTAGTTTC-TTTTATAACTTAATTCAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 851563 116 - 2385121 TGA-------AGTTGGGTTTGTTTTTCCCACTTTCCCATTCTGTCAACGT-CAGTTGTTATTTACTCT------AAACAACCGTTCTTTCATTTTATCCTAAGTTAGTTTC-TTTTATAACTTAATTCACT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2287501 114 + 4274983 TGA-------AGTTGGGTTGGTTTTTCCCACTTTCCCATTCTGTCAATAT-CAGTTGTTATTTACTCT------AAACAACCGTTCTTTCATTTTATCCT--GTTAGTTTC-TTTTATAACTTAATTCAAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28520844 116 + 49145316 TGA-------GGTTGGTTTTGTTTTTCCCACTTTCCCATCCTATCAATGT-CATTTGTTATTTACTCT------AAACAATCATTCTTTCATTTTATGCTAAGTGAGTTTC-TTTTATAATTTAGTTCAAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5362092 116 + 8899380 TGA-------GGTTGGTTTTGTTTTTCCCACTTTCCCATCCTATCAACGT-CATTTGTTATTTACTCT------AAACAATCATTCTTTCATTTTATGCTAAGTGAGTTTC-TTTTATAATTTAATTCAGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1575412 116 - 2680843 TGA-------GTTTGGTTTTGTTTTTCCCACTTTCCCATCCTATCAACGT-CATTTGTTATTTACTCT------AAACAATCATTCTTTCATTTTATGCTAAGTGAGTTTC-TTTTATAATTTAATTCAGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 323025 116 - 4471408 TGA-------GGTTAGTTTTGTTTTTCCCACTTTCCCATCCTATCAACGT-CATTTGTTATTTACTCT------AAACAATCATTCTTTCATTTTATGCTAAGTGAGTTTC-TTTTATAATTTAATTCAGT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4575959 111 - 122678785 ------------------TAGTTTT--CTGTTTTCCCATCCTGTTGATGTCCATTTGTTATTTCTTTCTTTTTGATATAGTCATTCTCCCATTTTATTCTAAGTAGGTGTAATTGTATAACTTAATTCAAT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3930646 115 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e otoGar3.GL873654 5436621 3445 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=269742.000000 s hg38.chr19_GL383574v1_alt 33745 28 + 155864 TCCCTTGGTATTAAA-CACTGTTCAGTA-C s panTro5.chr19 36102362 28 + 61309027 TCCCTTGGTATTAAA-CACTGTTCAGTA-C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39848421 28 + 64411610 TCCCTTGGTATTAAA-CACTGTTCAGTA-C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266158 28 - 8369475 TCCCTTGGTATTAAA-CACTGTTCAGTA-C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63860916 28 - 106955855 TCCCTTGGTATTAAA-CACTGTTCAGTA-C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30169375 29 + 53671032 TCCCTTGATATTAAA-CACTGTTAAGTATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34622246 29 + 59248254 TCCCTTGATATTAAA-CACTGTTAAGTATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4490034 29 - 13342542 TCCCTTGATATTAAA-CACTGTTAAGTATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5420846 29 + 7714307 TCCCTTGATATTAAA-CACTGTTAAGTATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29228075 29 + 50890351 TCCCTTGATATTAAA-CACTGTTAAGTATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 851679 29 - 2385121 TCCCTTGATATTAAA-CACTGTTAAGTATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2287615 29 + 4274983 TCCCTTCATATTAAA-CACTATTAAGTATT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28520960 27 + 49145316 TCCCTTTATATTTAA-CACTATCT--TATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5362208 29 + 8899380 TCCCTTTATATTTAA-CACTGTTCAGTATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1575528 29 - 2680843 TCCCTTTATATTTAA-CACTGTTCAGTATT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 323141 29 - 4471408 TCCCTTTATATTTAA-CACTGTTCAGTATT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5440066 29 + 5549422 TTCCTTTATAGTAAATCACCATTTAGTAC- i otoGar3.GL873654 I 3445 I 1 s canFam3.chr1 4576070 29 - 122678785 TCCCTTGATATTAAA-CATTGTTCAGTAAT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3930646 115 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I a score=1839907.000000 s hg38.chr19_GL383574v1_alt 33773 135 + 155864 TTTGGAAGTAGCTTACTTAATAGCTTTTTCTGCTGTGTGatttattcaagaaatattcaaatgtcagctatatgtagagcactgtgttagattctgtgggagttgcaaagatgatctagatacagatctttctcc s panTro5.chr19 36102390 135 + 61309027 TTTGGAAGTAGCTTACTTAATAGCTTTTTCTGCTGTGTGATTTATtcaagaaatattcaaatgtcagctatatgtagagcactgtgttagattctgtgggagttgcaaagaTGATCTAGATACAGATCTTTCTCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39848449 135 + 64411610 TTTGGAAGTAGCTTACTTAATAGCTTTTTCTGCTGTGTGatttattcaagaaatattcaaatgtcagctatatgtagagcactgtgttagattctgtgggagttgcaaagatgatctagatacagatctttctcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266186 135 - 8369475 TTTGGAAGTAGCTTACTTAATAGCTTTTTCTGCTGTGTGATTTATtcaagaaatattcaaatgtcagctatatgtagagcactgtgttagattctgtgggagttgcaaagatgatctagatacagatctttctcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63860944 135 - 106955855 TTCGGAAGTAGCTTACTTAATAGCTTTTTCTGCTGTGTGatttattcaagaaatactcaaatgtcagctatatgtagaggactgtgttagattctgtaggagttgcaaagatgatctagatacagatctttctcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30169404 135 + 53671032 TTTGGAAGTAGCTTACTTAATAGCTTTTTCTACTGTGTGATTTATtcaagaaatactcaaatgtcagctgtatgtagagcactgtgttagattctgtgggagttgcaaagatgatctagttacagatctttctcc i rheMac8.chr19 C 0 I 3 s macFas5.chr19 34622275 135 + 59248254 TTTGGAAGTAGCTTACTTAATAGCTTTTTCTACTGTGTGATTTATTCAAGAAATACTCAAATGTCAGCTGTATGTAGAGCACTGTGTTAGATTCTGTGGGAGTTGCAAAGATGATCTAGTTACAGATCTTTCTCC i macFas5.chr19 C 0 I 3 s macNem1.NW_012011689v1 4490063 135 - 13342542 TTTGGAAGTAGCTTACTTAATAGCTTTTTCTACTATGTGATTTATtcaagaaatactcaaatgtcagctgtatgtagagcactgtgttagattctgtgggagttgcaaagatgatctagatacagatctttctcc i macNem1.NW_012011689v1 C 0 I 3 s cerAty1.NW_012005268v1 5420875 135 + 7714307 TTTGGAAGTAGCTTACTTAATAGCTTTTTCTACTGTGTGATTTATtcaagaaatactcaaatgtcagctgtatgtagagcactgtgttagattctgtgggagttgcaaagatgatctagatacagatctttctcc i cerAty1.NW_012005268v1 C 0 I 3 s chlSab2.chr6 29228104 135 + 50890351 TTTGGAAGTAGCTTACTTAATAGCTTTTTCTACTGTGTGATTTATTCAAGAAATACTCAAATGTCAGCTGTATGTAGAGCACTGTGTTAGATTCTGTGGGAGTTGCAAAGATGATCTAGATACAGATCTTTTTCC i chlSab2.chr6 C 0 I 3 s manLeu1.NW_012102454v1 851708 135 - 2385121 TTTGGAAGTAGCTTACTTAATAGCTTTTTCTACTGTGTGATTTATtcaagaaatactcaaatgtcagctgtatgtagagcactgtgttagattctgtgggagttgcaaagatgatctagatacagatctttctcc i manLeu1.NW_012102454v1 C 0 I 3 s colAng1.NW_012111697v1 2287644 135 + 4274983 TTTGGAAGTAGCTTACTTAATAGCTTTTTCTACTGTGTGATTTATtcaagaaattctcaaatgtcagctgtatgtagagcactgtgttagattctgtgggagctgcaaagatgatctagatacagatctttctcc i colAng1.NW_012111697v1 C 0 I 3 s calJac3.chr22 28520987 135 + 49145316 TCTGGAAATAGCTTACTTAATAGCCTTTTTCACTGTGCGatttattcaagaaatattcacatgtcagctatatgtagagcactgtgttagattctatggaagttgcaaagatgatctagatatacatctttcttc i calJac3.chr22 C 0 I 3 s saiBol1.JH378197 5362237 131 + 8899380 TTTGGAAGTAGCTTACTTAATAGCCTTTTTCAGTGTGCAGTTTATTCAAGAAATATTCAAATGTCAGCTATATGTAGAGCACTGTGTCAGATTCTATGGGAGTTGCAAAGATGATCTAGATACACA----TCTTC i saiBol1.JH378197 C 0 I 3 s cebCap1.NW_016107633v1 1575557 135 - 2680843 TTTGGAAGTAGCTTACCTAATAGCCTTTTTCACTGTGCAatttattcaagaaatattgaaatgtcagctatatgtagcgcactatgttagattctatgggagttgcaaagatgatctagatacacatctttcttc i cebCap1.NW_016107633v1 C 0 I 3 s aotNan1.NW_018505377v1 323170 135 - 4471408 TTTGGAAGTAGCTTACTTAATAGCCTTTTTCACTGTGCGatttattcaagaaatactcaaatgtcagctatatgtagagcactgtgttagattctatgggagttgcaaagatgatctagatacacatctttcttc i aotNan1.NW_018505377v1 C 0 I 3 s micMur3.chr22 3930761 133 - 30143674 TTTGGAAATGGCTTACTTAATAGCATTTTCCAGTGTGGGATTTATtcaagaaatactcagatgtcagctatatgtagagcactgtattagtttctgtgagagttgcaaagatgatctatatac--atctttgtcc i micMur3.chr22 I 115 I 3 s otoGar3.GL873654 5440096 130 + 5549422 TTTGGAAATAG----CTTAATAGCATTTTCTACTAGGGGatttatccaagaaatattcagatgtca-ctatatgtagagcactgtgttagtttctgtgggagttccaaagatgatctagatacagatctttcccc i otoGar3.GL873654 I 1 I 3 s canFam3.chr1 4576099 135 - 122678785 TTTGGAAATTGCTTACTTAATAGCTCCTTCCACTATGGAATTTATTTAAGAAATATGCAAATGTGAGCAATATGAAGGGTACAGTGTTAGATACTGAGGGAGTTGCAAAGATCATTTAGATACAGAATTTTCTCT i canFam3.chr1 C 0 I 218 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e dasNov3.JH563638 280401 128 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I a score=761480.000000 s hg38.chr19_GL383574v1_alt 33908 59 + 155864 agatctttaaattcta-gaaggg---tagtatagacaGAATGAT-AGAATGCTGTGTGGTTTTC s panTro5.chr19 36102525 59 + 61309027 AGATCTTTGAATTCTA-GAAGGG---TAGTATAGACAGAATGAT-AGAATGCTGTGTGGTTTTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39848584 59 + 64411610 agatctttgaattcta-gaaggg---tagtatagacaGAATGAT-AGAATGCTGTGTGGTTTTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266321 59 - 8369475 agatctttaaattcta-gaaggg---tagtttagacagaaTGAT-AGAATGCTGTGTGGTTTTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861079 59 - 106955855 agatctttaaattcta-gaaggg---tagtatagacaGAATGAT-AGAATGCTGTGTGGTTTTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30169542 59 + 53671032 agatctttaaattcta-gaaagg---tagtctagacagaaTGAT-AGAATGCTGTGTGGTTTTC i rheMac8.chr19 I 3 C 0 s macFas5.chr19 34622413 59 + 59248254 AGATCTTTAAATTCTA-GAAAGG---TAGTCTAGACAGAATGAT-AGAATGCTGTGTGGTTTTC i macFas5.chr19 I 3 C 0 s macNem1.NW_012011689v1 4490201 59 - 13342542 agatctttaaattcta-gaaagg---tagtctagacagaaTGAT-AGAATGCTGTGTGGTTTTC i macNem1.NW_012011689v1 I 3 C 0 s cerAty1.NW_012005268v1 5421013 59 + 7714307 agatctttaaattcta-gaaagg---tagtctagacagaaTGAT-AGAATGCTGTGTGGTTTTC i cerAty1.NW_012005268v1 I 3 C 0 s chlSab2.chr6 29228242 59 + 50890351 AGATCTTTAAATTCTA-GAAAGG---TAGTCTAGACAGAATGAT-AGAATGCTGTGTGGTTTTC i chlSab2.chr6 I 3 C 0 s manLeu1.NW_012102454v1 851846 59 - 2385121 agatctttaaattcta-gaaagg---tagtctagacagaaTGAT-AGAATGCTGTGTGGTTTTC i manLeu1.NW_012102454v1 I 3 C 0 s colAng1.NW_012111697v1 2287782 59 + 4274983 agatctttaaattcta-gaaggg---tagtctagacagaaTGAT-AGAATGCTGTGTGGTTTTT i colAng1.NW_012111697v1 I 3 C 0 s calJac3.chr22 28521125 59 + 49145316 agatctttaaattcta-gaaggg---taatagagacagaATGAT-AGAATACTGTATGGTTTTC i calJac3.chr22 I 3 C 0 s saiBol1.JH378197 5362371 59 + 8899380 AGATCTTTAAATTCTG-GAAGGG---TAATATAGACAGAATGAT-AGAATACTGTATGCttttc i saiBol1.JH378197 I 3 I 3352 s cebCap1.NW_016107633v1 1575695 59 - 2680843 agatttttgaattcta-gaaggg---taatatagacaGAATGAT-AGAATACTGTACGATTTTC i cebCap1.NW_016107633v1 I 3 C 0 s aotNan1.NW_018505377v1 323308 59 - 4471408 agatctttaaattcta-gaaggg---taatatagacaGAATGAT-AGAATACTGTATGGTTTTC i aotNan1.NW_018505377v1 I 3 C 0 s micMur3.chr22 3930897 62 - 30143674 agATCTTTAAATTCTG-AAAGAGGTGGAGTATAGGCAGAATGAT-AGAATGCTCTATAGTTTTC i micMur3.chr22 I 3 C 0 s otoGar3.GL873654 5440229 63 + 5549422 agatctttaacgtcta-gaaggggtagGGTATAAGCAGAATGATAAGAGTGCTGTCTAGTTTTC i otoGar3.GL873654 I 3 C 0 s canFam3.chr1 4576452 60 - 122678785 AGATCTTTCAATTCTAGGAAGGG---GAAGGTATAGAGAGTGGT-AGAATGCTGTGTCATTTTT i canFam3.chr1 I 218 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e dasNov3.JH563638 280401 128 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I a score=1396972.000000 s hg38.chr19_GL383574v1_alt 33967 131 + 155864 AAAGGAAGAACAGATTATTTCAGCCCAGGTG---------GAGTTGGgtgatggctaattttatgtgccaacttgactgggccacagtgcctaga-tatttgatcaaatattttcgatgtttctgtt------------------------------------------taagta-ttttttgt s panTro5.chr19 36102584 131 + 61309027 AAAGGAAGAACAGATTACTTCAGCCCAGGTG---------GAGTTGGgtgattgctaattttatgtgccaacttgactgggccacagtgcctaga-tatttgatcaaatattctcgatgtttctgtt------------------------------------------taagta-ttttttgt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39848643 131 + 64411610 AAAGGAAGAACAGATTACTTCAGCCCAGGTG---------GAGTTGGgtgatggctaattttatgtgccaacttgactgggccacagtgcctaga-tatttgatcaaatattctcgatgtttctgtt------------------------------------------taagta-ttttttgt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266380 132 - 8369475 AAAGGAAGAACAGATTACTTCAGCCCAGGTG---------GAGTTGGgtgatggctaattttatgtgccaacttgcctgggccacagtgcctaga-tatttgatcaaatattctcgatgtttctgtt------------------------------------------taagtatttttttgt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861138 131 - 106955855 AAAGGAAGAACAGATTACTTCAGCCCAGGTG---------GAGTTGGgtgatggctaattttatgtgccaacttgactggaccacagtgtctaga-tatttgatcaaatattctcgatgtttctgtg------------------------------------------aaagta-ttttttgt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30169601 131 + 53671032 AAAGGAAGAACAGATTACTTCTGCCTGGGTG---------GAGTTGGgtgatggctaattttatgtgccaacttaactgggccacagtgcctaga-tatttgatcaaatattcttgatgtttctgtg------------------------------------------aaagta-ttttttat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34622472 131 + 59248254 AAAGGAAGAACAGATTACTTCTGCCTGGGTG---------GAGTTGGgtgatggctaattttatgtgccaacttaactgggccacagtgcctaga-tatttgatcaaatattcttgatgtttctgtg------------------------------------------aaagta-ttttttat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4490260 131 - 13342542 AAAGGAAGAACAGATTACTTCTGCCTGGGTG---------GAGTTGGgtgatggctaattttatgtgccaacttaactgggccacagtgcctaga-tatttgatcaaatattcttgatgtttctgtg------------------------------------------aaagta-ttttttat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421072 131 + 7714307 AAAGGAAGGACAGATTACTTCTGCCCGGGTG---------GAGTTGGgtgatggctaattttatgtgccaacttaactgggccacagtgcctaga-tatttgatcaaatattcttgatgtttctgtg------------------------------------------aaagta-ttttttat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29228301 131 + 50890351 AAAGGAAGAACAGATTACTTCTGCCCGGGTG---------GAGTTGGgtgatggctaattttatgtgccaacttgactgggccacagtgcctaga-tatttgatcaaatattcttgatgtttctgtg------------------------------------------aaagta-ttttttat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 851905 131 - 2385121 AAAGGAAGAACAGATTACTTCTGCCCGGGTG---------GAGTTGGgtgatggctaattttatgtgccaacttaactgggccacagtgcctaga-tatttgatcaaatattcttgatgtttctgtg------------------------------------------aaagta-ttttttat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2287841 131 + 4274983 GAAGGAAGAACAGATTACTTCTGCCCGGGTA---------GAGTTGGgtgatggctaattttatgtgccaacttgactgggctgcagtgcgtaga-tatttgatcacatattcttgatgtttctgtg------------------------------------------aaagtg-ttttttat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28521184 120 + 49145316 AAAGGAAGAACAGATTCCTTCAGTCCAGGTG---------GAGTTGGAtgatggttaattttatgtgccaacttgactggtccacagtgcctaga-tagttgatc-----------atgtttctgtg------------------------------------------aaggta-ttttttat i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1575754 132 - 2680843 AAAGGAAGAACAGATTACTTCAGTCCAGTTG---------GAGTTGGAtgatggttaattttatgtgccaacttgactgggccacagtgcctaga-tatttgatcaaatattctcgatgtttctgtg------------------------------------------aaggtatttttttgt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 323367 131 - 4471408 AAAGGAAGAACAGATTACTTCAGTCCAGGTG---------GAGTTGGAtgatggttaattttatgtgccaacttgactgggccacagtgcctaga-tgtttgatcaaatattctcgatgtttctgtg------------------------------------------aaggta-ttttttgt i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3930959 130 - 30143674 AGAGGAAGAGCAGGTTACTTCAGCCTGGCTG---------GAGTTGCgtgttggttaagtttatgtgtcaacctgactgggccacagtacctaga-tatttggttaaatattctggatgtttctgtg-------------------------------------------aggtg-ttttttgg i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5440292 125 + 5549422 AGAGGAAGCGCAGATAACTTCAGCCTGGGTG-------GTGAATTAtgtgatgattaattttatgtatcaacttgactggg--------cctggattgtttggtctgacactctggatatttttatg-------------------------------------------aagat-atttttct i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4576512 166 - 122678785 AGAGAAAGAATGTATTACTTCCACCTGGAAGTATTACTGAGAGTTGtgtgatggttaattttgtgt----------------catcttgcccaga-tatttgttcaaatattctgaatgtttctgtgatgttttttggacaagattaatttttttatttgatttttaaaaagatt-ttatttgt i canFam3.chr1 C 0 I 156 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e dasNov3.JH563638 280401 128 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=1687283.000000 s hg38.chr19_GL383574v1_alt 34098 149 + 155864 atgagattaacatttaagttggtagattgtgagtag--------cctccatc-tgtgggtgggcctcatccagtcagtggaaggcctttaatagaacaaagactgac--ccctgagcaaggag---ttctgccagc--------------------------ctgctctgcagattttggatttacc---ag s panTro5.chr19 36102715 149 + 61309027 atgagattaacatttaagttggtagattgtgagtag--------cctccatc-tgtgggtgggcctcatccaatcagtggaaggcctttaatagaacaaagactgac--ccctgagcaaggag---ttctgccagc--------------------------ctgctctgcagattttggatttacc---ag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39848774 149 + 64411610 atgagattaacatttaagttggtagattgtgagtag--------cctccatc-tgtgggtgggcctcatccaatcagtggaaggcctttaatagaacaaagactgac--ccctgagcaaggag---ttctgccagc--------------------------ctgctctgcagattttggatttacc---ag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266512 149 - 8369475 atgagattaacatttaagttggtagattgtgagtag--------cctccatc-tgtgggtgggcctcatccaatcagtggaaggcctttaatagaacaaagactgac--ccctgagcaaggag---ttctgccagc--------------------------ctgctctgcagattttggatttacc---ag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861269 149 - 106955855 atgagattgacatttaaattggtagattgtgagtag--------cctccatt-tgtgggtgggcctcatccaatcagtggaaggcctttaatagaacaaagactgac--ctctgagcaaggag---ttctgccagc--------------------------ctgctctgtagattttggatttacc---ag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30169732 152 + 53671032 atgagattaacatttaaattggtagattgtgagtag--------cctccact-tgtgggtgggcctcatccaatcagtagaaggcctttaatagaacaaagactgac--ctctgagcaaggag---ttctgccagc--------------------------ctgctctgcagattttggatttaccaaaag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34622603 152 + 59248254 atgagattaacatttaaattggtagattgtgagtag--------cctccact-tgtgggtgggcctcatccaatcagtagaaggcctttaatagaacaaagactgac--ctctgagcaaggag---ttctgccagc--------------------------ctgctctgcagattttggatttaccaaaag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4490391 149 - 13342542 atgagattaacatttaaattggtagattgtgagtag--------cctccact-tgtgggtgggcctcatccaatcagtagaaggcctttaatagaacaaagactgac--ctctgagcaaggag---ttctgccagc--------------------------ctgctctgcagattttggatttacc---ag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421203 149 + 7714307 atgagattaacatttaaattggtagattgtgagtag--------cctccact-tgtgggtgggcctcatccaatcagtagaaggcctttaatagaacaaagactgac--ctctgagcaaggag---ttctgccagc--------------------------ctgctctacagattttggatttacc---ag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29228432 149 + 50890351 atgagattaacatttaaattggtagattgtgagtag--------cctccact-tgtgggtgggcctcatccaatcagtagaaggcctttaatagaacaaagactgac--ctctgagcaaggag---ttctgccagc--------------------------ctgctttgcagattttggatttacc---ag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852036 149 - 2385121 atgagattaacatttaaattggtagattgtgagtag--------cctccact-tgtgggtgggcctcatccaatcagtagaaggcctttaatagaacaaagactgac--ctctgagcaaggag---ttctgccagc--------------------------ctgctctgcagattttggatttacc---ag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2287972 149 + 4274983 atgagattaacatttaaattggtagattgtgagtag--------cctcgtct-tgtgggtgggcctcatccaatcagtggaaggcctttaatagaacaaagactgac--ctctgagcaaggag---ttctgccagc--------------------------ctgctctgcagattttggatttacc---ag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28521304 149 + 49145316 atgatattaacatttaaatcagtagatggtgagtag--------cctccatt-tgtcggtgggcctcatccaattagtggaaggcctttaataaaacaaagactgac--ctctgagcaagggg---ttctgccagc--------------------------ctgctctgcagattttggatatacc---ag i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1575886 149 - 2680843 atgagattgacatttaaatcagtagatggtgagtag--------cctccatt-tgtgggtgggcctcatccaattagtggaaggcctttaatagaacaaagactgac--ctctgagcaagggg---ttctgccagc--------------------------ctgctctgcagattttggatatacc---ag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 323498 149 - 4471408 atgagattaacatttaaatcagtagatggtgagtag--------cctccatt-tgtgggtgggcctcatccaattagtggaaggcctttaatagaacaaagactgac--ctctgagcaagggg---ttctgccagc--------------------------ctgctctgcagattttggatatacc---ag i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3931089 161 - 30143674 atgagattagtatttaaattggtaggttttgaatagtgtgttagcctccattatgtgaatgggactcatctaatcagttgaaggctttaactagaacaaagactgac--ctctgagcaaggaggaattctgccagc--------------------------ctgctctgcagattttggatttacc---ag i micMur3.chr22 C 0 I 149 s otoGar3.GL873654 5440417 142 + 5549422 gtgagat-----tttaaatcaatagattttgagtaa-------------attatatgaatgggactcatctaatcagttgaagaccttaa-tagaatgaaaactgat--ctctgaccaagaaggaatcccaccagc--------------------------ctactttgaagattttggatttact---gg i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4576834 174 - 122678785 acaagattaatttttagatcggtagactttaagtag----gttatctccatgatgtgaatgggtctcatccaatcgggtga----------tagagcaaagagtgacttttctgagcaggaaggaattttgccagcagaccacctctggactcaagcctcaactcttccctgggtctctagtctaca---a- i canFam3.chr1 I 156 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e dasNov3.JH563638 280401 128 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=873263.000000 s hg38.chr19_GL383574v1_alt 34247 101 + 155864 gcctcct-------taatcccttgggccaattcct-----taagtctctttctgtgtttgtatatg-------------------cacatctgatttattctgtttctctataaaa-cctgaccgatacCTGG s panTro5.chr19 36102864 101 + 61309027 gcctcct-------taatcccttgggccaattcct-----taagtctctttctgtgtttgtatatg-------------------cacatctgatttattctgtttctctataaaa-cctgaccgatacCTGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39848923 101 + 64411610 gcctcct-------taatcccttgggccaattcct-----taagtctctttctgtgtttgtatatg-------------------cacatctgatttattctgtttctctataaaa-cctgaccgatacCTGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266661 101 - 8369475 gccttct-------taatcccttgggccaattcct-----taagtctctttctgtgtttgtatatg-------------------cacatctgatttattctgtttctctataaaa-cctgaccgatacCTGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861418 102 - 106955855 gcctcct-------taaccccttgggccaattcct-----taagtctctttctgtgtttgtatatg-------------------cacatctgatttattctgtttctctgtaaaaccctgaccgatacCTGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30169884 102 + 53671032 gcctcct-------taatcccctgggccaattcct-----taagtctctttctgtgtttatatatg-------------------cacatctgatttattctgtttctctgtaaaaccctgactgatacCTGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34622755 102 + 59248254 gcctcct-------taatcccctgggccaattcct-----taagtctctttctgtgtttatatatg-------------------cacatctgatttattctgtttctctgtaaaaccctgactgatacCTGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4490540 102 - 13342542 gcctcct-------taatcccctgggccaattcct-----taagtctctttctgtgtttatatatg-------------------cacatctgatttattctgtttctctgtaaaaccctgactgatacCTGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421352 102 + 7714307 gcctcct-------taatcccctgggccaattcct-----taagtctctttctgtgtttatatatg-------------------cacatctgatttattctgtttctctgtaaaaccctgactgatacCTGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29228581 102 + 50890351 gcctcct-------taatcccctgggccaattcct-----taagtctctttctgtgtttatatatg-------------------cacatctgatttattctgtttctctgtaaaaccctgactgatacCTGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852185 102 - 2385121 gcctcct-------taatcccctgggccaattcct-----taagtctctttctgtgtttatatatg-------------------cacatctgatttattctgtttctctgtaaaaccctgactgatacCTGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2288121 102 + 4274983 gcctcct-------taatcccctgggccaattcct-----taagtctctttctgtgtttatatgtg-------------------cacatctgatttattctgtttctctgtaaaaccctgactgatacCTGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28521453 102 + 49145316 gcctcca-------taatcctctgggccaattcct-----ttagtcttgttctgtgtttgtatatg-------------------cacacctgattgggtctgtttctctgtaagaccttgactGTCACCTAC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576035 97 - 2680843 gcctgca------------ctctgggccaattcct-----ttagtcttgttccatgtttgtatatg-------------------cacacctgattgagtctgtttctctgtaagaccttgactgatacCTAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 323647 102 - 4471408 gcctcca-------taatcctctgggccaattcct-----ttagtcttgttccatgtttgtatatg-------------------cacacctgattgagtctgtttctctgtaagaccttgactgatacCTAC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5440559 96 + 5549422 acctcca-------caatccat-------gttccttaaaataaatttctctct-tgtttgtatgtg---------------------catctcattggttctgtttctctgaagaaccctgactcataca-AA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4577008 108 - 122678785 gcctactctgcagattttcacaagagccagttcct-----taaagtaaatt---tGTTGGGGCGAGGGGTGGGAGGGGGAGGGGGCATGCCCTGTTGGTTCT-----TCTAGAGAAACCTG------------ i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931250 149 - 30143674 I e dasNov3.JH563638 280401 128 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=278361.000000 s hg38.chr19_GL383574v1_alt 34348 27 + 155864 AATCTTCAAGTTGAAATTTAGGATAGG s panTro5.chr19 36102965 27 + 61309027 AATCTTCAAGTTGAAATTTAGGATAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849024 27 + 64411610 AATCTTCAAGTTGAAATTTAGGATAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266762 26 - 8369475 AATCTTCAAGTTGAAATTTAGGAT-GG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861520 27 - 106955855 AATCTTCAAGTTGAAATTTAGGATAGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30169986 27 + 53671032 AATCTTCAAGTTGAAATTTAGGATACT i rheMac8.chr19 C 0 I 9 s macFas5.chr19 34622857 27 + 59248254 AATCTTCAAGTTGAAATTTAGGATACT i macFas5.chr19 C 0 I 9 s macNem1.NW_012011689v1 4490642 27 - 13342542 AATCTTCAAGTTGAAATTTAGGATACT i macNem1.NW_012011689v1 C 0 I 9 s cerAty1.NW_012005268v1 5421454 27 + 7714307 AATCTTCAAGTTGAAATTTAGGATACT i cerAty1.NW_012005268v1 C 0 I 9 s chlSab2.chr6 29228683 27 + 50890351 AATCTTCAAGTTGAAATTTAGGATACT i chlSab2.chr6 C 0 I 9 s manLeu1.NW_012102454v1 852287 27 - 2385121 AATCTTCAAGTTGAAATTTAGGATACT i manLeu1.NW_012102454v1 C 0 I 13 s colAng1.NW_012111697v1 2288223 27 + 4274983 AATCTTCAAGTTGAAATTTAGGATACT i colAng1.NW_012111697v1 C 0 I 9 s calJac3.chr22 28521555 27 + 49145316 AATCTTCAAGTGCAAATTTAGGATACC i calJac3.chr22 C 0 I 9 s cebCap1.NW_016107633v1 1576132 27 - 2680843 AATCTTCAAGTGGAAATTTAGGATACC i cebCap1.NW_016107633v1 C 0 I 9 s aotNan1.NW_018505377v1 323749 27 - 4471408 AATGTTCAAGTGGAAATTTAGGATACC i aotNan1.NW_018505377v1 C 0 I 9 s otoGar3.GL873654 5440655 27 + 5549422 AATATCTAAGTTGAGACTTAGAATAGC i otoGar3.GL873654 C 0 I 3 s canFam3.chr1 4577116 23 - 122678785 ----TATAAGCTGAAATTTAGGATGAG i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 280529 27 + 643850 AGTATCTAAGCTAAAATTTAGGATAGG i dasNov3.JH563638 I 128 I 2 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931250 149 - 30143674 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=49002.000000 s hg38.chr19_GL383574v1_alt 34375 10 + 155864 GGGAGAGAGA s panTro5.chr19 36102992 10 + 61309027 GGGAGAGATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849051 10 + 64411610 GGGAGAGATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266788 10 - 8369475 GGGAGAGATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861547 10 - 106955855 GGGAGAGATA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170022 10 + 53671032 AGGAGAGAGA i rheMac8.chr19 I 9 C 0 s macFas5.chr19 34622893 10 + 59248254 AGGAGAGAGA i macFas5.chr19 I 9 C 0 s macNem1.NW_012011689v1 4490678 10 - 13342542 AGGAGAGAGA i macNem1.NW_012011689v1 I 9 C 0 s cerAty1.NW_012005268v1 5421490 10 + 7714307 AGGAGAGAGA i cerAty1.NW_012005268v1 I 9 C 0 s chlSab2.chr6 29228719 10 + 50890351 AGGAGAGATA i chlSab2.chr6 I 9 C 0 s colAng1.NW_012111697v1 2288259 10 + 4274983 AGGAGAGATA i colAng1.NW_012111697v1 I 9 C 0 s calJac3.chr22 28521591 9 + 49145316 GGGAGAGCT- i calJac3.chr22 I 9 C 0 s cebCap1.NW_016107633v1 1576168 9 - 2680843 GGGAGAGCT- i cebCap1.NW_016107633v1 I 9 C 0 s aotNan1.NW_018505377v1 323785 9 - 4471408 GGGAGAGCT- i aotNan1.NW_018505377v1 I 9 C 0 s otoGar3.GL873654 5440685 10 + 5549422 GGTATAGATA i otoGar3.GL873654 I 3 I 3 s canFam3.chr1 4577141 8 - 122678785 TGGAGAGA-- i canFam3.chr1 I 2 C 0 s dasNov3.JH563638 280558 10 + 643850 GGGTGTGGGT i dasNov3.JH563638 I 2 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931250 149 - 30143674 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5362430 3352 + 8899380 I e manLeu1.NW_012102454v1 852314 13 - 2385121 I a score=68221.000000 s hg38.chr19_GL383574v1_alt 34385 9 + 155864 -------AAAATAGAG s panTro5.chr19 36103002 9 + 61309027 -------AAAATAGAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849061 9 + 64411610 -------AAAATAGAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266798 9 - 8369475 -------AAAATAGAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861557 9 - 106955855 -------AAAATAGAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170032 9 + 53671032 -------AAAATAGAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34622903 9 + 59248254 -------AAAATAGAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4490688 9 - 13342542 -------AAAATAGAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421500 9 + 7714307 -------AAAATAGAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29228729 9 + 50890351 -------AAAATAGAG i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2288269 9 + 4274983 -------AAAACAGAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28521600 9 + 49145316 -------ATAATAGAG i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576177 9 - 2680843 -------ATAATAGAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 323794 9 - 4471408 -------ATAATAGAG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3931399 9 - 30143674 -------AAAATAGAA i micMur3.chr22 I 149 C 0 s otoGar3.GL873654 5440698 9 + 5549422 -------GATACAGTA i otoGar3.GL873654 I 3 C 0 s canFam3.chr1 4577149 8 - 122678785 --------AGCTATGG i canFam3.chr1 C 0 I 5 s dasNov3.JH563638 280568 16 + 643850 AGGAGCTACCATGAAG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5362430 3352 + 8899380 I e manLeu1.NW_012102454v1 852314 13 - 2385121 I a score=671284.000000 s hg38.chr19_GL383574v1_alt 34394 58 + 155864 GACAGAAAACCTGATCTGTGAACTGAGAATAATGAGCTTTGTTAGAATTT--AAGTTTGA---- s panTro5.chr19 36103011 58 + 61309027 GACAGAAAACCTGATCTGTGAACTGAGAATAATGAGCTTTGTTAGAATTT--AAGTTTGA---- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849070 58 + 64411610 GACAGAAAACCTGATCTGTGAACTGAGAATAATGAGCTTTGTTAGAATTT--AAGTTTGA---- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266807 58 - 8369475 GACAGAAAGCCTGATCTGTGAACTGAGAATAATGAGCTTTGTTAGAATTT--AAGTTTGA---- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861566 58 - 106955855 GACTGAAAACCTGATCTGTGAACTGAGAATAATGAGCTTTGTTGGAATTT--AAGTTTGA---- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170041 60 + 53671032 GACAGAAAACCTGATCTGTGAACTGAGAACAATGAGCTTGGTTGGAATTTTTAAATTTGA---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34622912 60 + 59248254 GACAGAAAACCTGATCTGTGAACTGAGAACAATGAGCTTGGTTGGAATTTTTAAATTTGA---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4490697 60 - 13342542 GACAGAAAACCTGATCTGTGAACTGAGAACAATGAGCTTGGTTGGAATTTTTAAATTTGA---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421509 60 + 7714307 GACAGAAAACCTGATCTGTGAACTGAGAACAATGAGCTTGGTTGGAATTTTTAAATTTGA---- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29228738 60 + 50890351 GACGGAAAACCTGATCTGTGAACTGAGAACAGTGAGCTTGGTTGGAATTTTTAAATTTGA---- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852327 60 - 2385121 GAGAGAAAACCTGTTCTGCGAACTGAGAACAATGAGCTTGGTTGGAATTTTTAAATTTGA---- i manLeu1.NW_012102454v1 I 13 C 0 s colAng1.NW_012111697v1 2288278 60 + 4274983 GACAGAAAACCTGATCTGTGAACTGAGAACAATGAACTTGGTTGGAATTTTAAAATTTGA---- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28521609 58 + 49145316 AACAGAAAACCTGATTTGTGAACTGTGAATAATAATCTTGGTTGGAATTT--AAGTTTGA---- i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576186 58 - 2680843 GACAGAAAACCTGATTTGTGAACTGAGAATAATAAGCTTGGTTGGAATTT--AAGTTTGA---- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 323803 58 - 4471408 GACAGAAAACCTGATTTGTGAACTGAGAATAATAAGCTTGGTTGGAATTT--AAGTTTGA---- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3931408 58 - 30143674 GACAGAAAACCTGATCTGTGTACCTAGGATAATGAGCTTGGTTGGAACTT--AAGTTTGA---- i micMur3.chr22 C 0 I 159 s otoGar3.GL873654 5440707 59 + 5549422 GACAGAAAAACTGGTCTGTGTACTGAGAGTAATGAGATGAGTTGGAACTTC-AAGTGTGA---- i otoGar3.GL873654 C 0 I 4 s canFam3.chr1 4577162 58 - 122678785 GACAGAAAACCTGCTCTGGGTATTTAGAATAATAAGCTTGGTTGGAACTG--AAGCTTAT---- i canFam3.chr1 I 5 C 0 s dasNov3.JH563638 280584 56 + 643850 GATAGAAA--CTGGTCTGGGTACTCAGAATAGT----TTGTTTGAAACTT--AAATTTGGATTA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=786758.000000 s hg38.chr19_GL383574v1_alt 34452 75 + 155864 GTATGCTGGGACCAGGTCTTGG-----AGCTGATACAGGA-CTGAAGAG-TTTTAAC-TT------TACATCATAAATCTTATTCTAAG s panTro5.chr19 36103069 75 + 61309027 GTATGCTGGGACCAGGTCTTGC-----AGCTGATACTGGA-CTGAAGAG-TTTTAAC-TT------TACATCATAAATCTTATTCTAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849128 75 + 64411610 GTATGCTGGGACCAGGTCTTGC-----AGCTGATACTGGA-CTGAAGAG-TTTTAAC-TT------TACATCATAAATCTTATTCTAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266865 75 - 8369475 GTATGCTGGGACCAGGTCTTGC-----AGCTGATACTGGA-CTGAAGAG-TTTTAAC-TT------TACATCATAAATCTTATTCTAAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861624 75 - 106955855 GTATGTTGGGACCAGGTCTTGC-----AGCTGATACTTGA-CTGAAGAG-TTTTAAC-TT------TACATCATAAATCTTATTCTAAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170101 78 + 53671032 GTATGTTGGGACCAGATCTTGC-----AGCTGATACTTGA-CTGAAGAG-TTTTAAC-TTT---ACTACATCATAAATCTTATTCTAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34622972 78 + 59248254 GTATGTTGGGACCAGATCTTGC-----AGCTGATACTTGA-CTGAAGAG-TTTTAAC-TTT---ACTACATCATAAATCTTATTCTAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4490757 78 - 13342542 GTATGTTGGGACCAGATCTTGC-----AGCTGATACTTGA-CTGAAGAG-TTTTAAC-TTT---ACTACATCATAAATCTTATTCTAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421569 78 + 7714307 GTATGTTGGGACCAGATCTTGC-----AGCTAATACTTGA-CTGAAGAG-TTTTAAC-TTT---ACTACATCATAAATCTTATTCTAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29228798 78 + 50890351 GTATGTTGGGACCAGATCTTGC-----AGCTGATACTTGA-CTGAAGAG-TTTTAAC-TTT---ACTACATCATAAATCTTATTATAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852387 78 - 2385121 GTATGTTGGGACCAGATCTTGC-----AGCTGATACTTGA-CTGAAGAG-TTTTAAC-TTT---ACTACATCATAAATCTTATTCTAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2288338 79 + 4274983 GTATGTTGGAACCAGATCTTGC-----AGCTGATACTTGA-CTAAAGAGTTTTTAAC-TTT---ACTACATCATAAATCTTATTCTAAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28521667 81 + 49145316 GTATGTTGGGACCAGATCTTGC-----AGCTGATACTTGA-CTGAGGAG-TTTTAAC-TTTAAGACTGCATCGTAAGTCTTATTCCAGG i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576244 81 - 2680843 GTATGTTGGGACCAGATCTTGC-----AGCTGATACTTGA-CTGAGGAG-TTTTAAC-TTTAAGACTGCATCATAAATCTTATTCCAAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 323861 82 - 4471408 GTATGTCGGGACCATATCTTGC-----AACTGATACTTGA-CTGAGGAG-TTTTAACTTTTAAAACTGCATCATAAATCTTATTCCAAG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5440770 79 + 5549422 GTAGATTGGGACCAG-TGTTGCAGTTGAGCTGATGCTTGA-CTAAAGAG-CTTTAAG-GT------TGCATTATAAATGGTATTCTAAA i otoGar3.GL873654 I 4 C 0 s canFam3.chr1 4577220 71 - 122678785 ATAAGT--------GATCTTAC-----AAGTGATAATTGA-CAGAAG---TTTTAAC-TGTAAGACTACATCAGAAGTCTTATTCTAgg i canFam3.chr1 C 0 I 226 s dasNov3.JH563638 280640 82 + 643850 ATAGGTTGTAATCAGGTCTTGG-----AGCTGATACTTGATCTGAGGCG-TTTTAAC-TTTAAGACCACATCATAAATCTTATTCTAGA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931466 159 - 30143674 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=48912.000000 s hg38.chr19_GL383574v1_alt 34527 5 + 155864 TTTTC- s panTro5.chr19 36103144 5 + 61309027 TTTTC- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849203 5 + 64411610 TTTTC- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266940 5 - 8369475 TTTTC- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861699 5 - 106955855 TTTTC- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170179 5 + 53671032 TTTTC- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623050 5 + 59248254 TTTTC- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4490835 5 - 13342542 TTTTC- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421647 5 + 7714307 TTTTC- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29228876 5 + 50890351 TTTTC- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852465 5 - 2385121 TTTTC- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2288417 5 + 4274983 TTTTC- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28521748 5 + 49145316 TTTTC- i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576325 5 - 2680843 TTTTC- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 323943 5 - 4471408 TTTTC- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5440849 5 + 5549422 TTTCA- i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 280722 5 + 643850 -TTTCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931466 159 - 30143674 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4577291 226 - 122678785 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=264985.000000 s hg38.chr19_GL383574v1_alt 34532 24 + 155864 ATTTGAA----CCTGGTTTTAGTTTCTT----- s panTro5.chr19 36103149 24 + 61309027 ATTTGAA----CCTGGTTTTAGTTTCTT----- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849208 24 + 64411610 ATTTGAA----CCTGGTTTTAGTTTCTT----- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266945 24 - 8369475 ATTTGAA----CCTGGTTTTAGTTTCTT----- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861704 24 - 106955855 ATTTGAA----CTTGGTCTTAGTTTCTT----- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170184 24 + 53671032 ATTTGAA----CTTGGTCTTAGTTTCTT----- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623055 24 + 59248254 ATTTGAA----CTTGGTCTTAGTTTCTT----- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4490840 24 - 13342542 ATTTGAA----CTTGGTCTTAGTTTCTT----- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421652 24 + 7714307 ATTTGAA----CTTGGTCTTAGTTTCTT----- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29228881 24 + 50890351 ATTTGAA----CTTGGTCTTAGTTTCTT----- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852470 24 - 2385121 ATTAGAA----CTTGGTCTTAGTTTCTT----- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2288422 24 + 4274983 ATTTGAA----CTTGGTCTTAGTTTCTT----- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28521753 24 + 49145316 ATTTGAA----ATTGGTCTTAGTTTCTT----- i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576330 24 - 2680843 ATTTGAA----ATTGGTCTTAGTTTCTT----- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 323948 24 - 4471408 ATTTGAA----ATTGGTCTTAGTTTCTT----- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5440854 24 + 5549422 GTTTGAA----CTTGGCCTTAGtttctt----- i otoGar3.GL873654 C 0 I 982 s canFam3.chr1 4577517 24 - 122678785 ATTTGAA----TTTAGCCTCAGATTTCT----- i canFam3.chr1 I 226 C 0 s dasNov3.JH563638 280727 33 + 643850 GTTTGAACTTTCTTGGCCTTACTTTTCCTAACT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931466 159 - 30143674 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=95912.000000 s hg38.chr19_GL383574v1_alt 34556 13 + 155864 A----ACTTTGT-AAGCG--- s panTro5.chr19 36103173 13 + 61309027 A----ACTTTGT-AAGCG--- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849232 13 + 64411610 A----ACTTTGT-AAGCG--- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266969 13 - 8369475 A----ACTTTGT-AAGCG--- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861728 13 - 106955855 A----ACTTTGT-AAGCG--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170208 17 + 53671032 AACTTACTTTGT-AAGCG--- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623079 17 + 59248254 AACTTACTTTGT-AAGCG--- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4490864 17 - 13342542 AACTTACTTTGT-AAGCG--- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421676 17 + 7714307 AACTTACTTTGT-AAGCG--- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29228905 17 + 50890351 AACTTACTTTGT-AAGCA--- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852494 17 - 2385121 AACTTACTTTGT-AAGCG--- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2288446 17 + 4274983 GACTTACTTTTT-AAGCG--- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28521777 17 + 49145316 AACTTACTTTGT-AAGCA--- i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576354 17 - 2680843 AACTTACTTTGT-AAGCA--- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 323972 17 - 4471408 AACTTGCTTTGT-AAGCA--- i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4577541 15 - 122678785 AACTTAATTTGG-CCA----- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 280760 17 + 643850 ----AACTTTGCAAAGCAACA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931466 159 - 30143674 I e otoGar3.GL873654 5440878 982 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=344718.000000 s hg38.chr19_GL383574v1_alt 34569 32 + 155864 TCTTTTGGATATTTCAG-TG-TTTCATTTGTTGC s panTro5.chr19 36103186 32 + 61309027 TCTTTTGGATATTTCAG-TG-TTTCGTTTGTTGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849245 32 + 64411610 TCTTTTGGATATTTCAG-TG-TTTCGTTTGTTGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6266982 32 - 8369475 TCTTTTGGATATTTCAG-TG-TTTCATTTGTTGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861741 32 - 106955855 TCTTTTGGATAATTCAG-TG-TTTCATTTGTTGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170225 32 + 53671032 TCTTTTGAATAATTCAG-TG-TTTCATTTGTTGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623096 32 + 59248254 TCTTTTGAATAATTCAG-TG-TTTCATTTGTTGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4490881 32 - 13342542 TCTTTTGAATAATTCAG-TG-TTTCATTTGTTGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421693 32 + 7714307 TCTTTTGGATAATTCAG-TG-TTTCATTTGTTGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29228922 32 + 50890351 TCTTTTGGATAATTCAG-TG-TTTCATTTGTTGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852511 32 - 2385121 TCTTTTGGATAATTCAG-TG-TTTCATTTGTTGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2288463 32 + 4274983 TCTTTTGGATAATTCAG-TG-TTTCATTTGTTGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28521794 32 + 49145316 TCTTTCAGATAATTCAG-TG-TTTCATTTGTAGC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576371 32 - 2680843 TCTTTCAGATAATTCAG-TG-TTTCATTTGTAGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 323989 32 - 4471408 TCTTTCAGATAATTCAG-TG-TTTCATTTGTAGC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5441860 32 + 5549422 -TTTTTTAATAATTTGT-TTCTTTTATTTGTTAC i otoGar3.GL873654 I 982 C 0 s canFam3.chr1 4577556 32 - 122678785 TTTCTTGAATAATTCAG-TT-TTTTGTTTATTGC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 280777 33 + 643850 TTTCTTGAAGAATTCAACCA-TTTTATTTGTTAC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931466 159 - 30143674 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=864021.000000 s hg38.chr19_GL383574v1_alt 34601 74 + 155864 TCTCAAATTTTGGTATTCAACAGACTCGTTTCTTTTTCTTTTCAGTTAACATTAGAGTCTAATTTACAATTTTT s panTro5.chr19 36103218 74 + 61309027 TCTCAAATTTTGGTATTCAACAGACTCGTTTCTTTTTCTTTTCAGTTAACATTAGAGCCTAATTTACAATTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849277 74 + 64411610 TCTCAAATTTTGGTATTCAACAGACTCGTTTCTTTTTCTTTTCAGTTAACATTAGAGCCTAATTTACAATTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267014 70 - 8369475 TCTCAAATTTTGGTATTCAACAGACTCG----TTTTTCTTTTCAGTTAACATTAGAGCCTAATTTACAATTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861773 74 - 106955855 TCTCAAATTTTGGTATTCAACAGACTTGTTTCTTTTTCTTTCCGGTTAACATTAGAGCCTAATTTACAATTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170257 74 + 53671032 TCTCAAATTTTGGTATTCAACAGACTTGTTTCTTTTTATTTTCAGTTAACATTAGAGCCTAATTTACAATTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623128 74 + 59248254 TCTCAAATTTTGGTATTCAACAGACTTGTTTCTTTTTATTTTCAGTTAACATTAGAGCCTAATTTACAATTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4490913 74 - 13342542 TCTCAAATTTTGGTATTCAACAGACTTGTTTCTTTTTATTTTCAGTTAACATTAGAGCCTAATTTACAATTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421725 74 + 7714307 TCTCAAATTTTGGTATTCAACAGACTTGTTTCTTTTTATTTTCAGTTAACATTAGAGCCTAATTTACAATTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29228954 74 + 50890351 TCTCAAATTTTGGTATTCAACAGACTTGTTTCTTTTTATTTTCAGTTAACATTAGAGCCTAATTTACAATTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852543 74 - 2385121 TCTCAAATTTTGGTATTCAACAGACTTGTTTCTTTTTATTTTCAGTTAACATTAGAGCCTAATTTACAATTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2288495 74 + 4274983 TTTCAAATTTTGGTATTCAACAGACTTGTTTCTTTTTATTTTCAGTTAACGTTAGAGCCTAATTTACAATTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28521826 74 + 49145316 TCCCAAAGTTTTGTATTCAACAGACTTGTTTCTTTTTCTTTTCATTTGACATGAGAGCCTAATTTATAATTTTT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576403 74 - 2680843 TCCCAAAGTTTGGTATTCAAGAGACTTGTTTCTTTTTCTTTTCAGTTGACATGAGAGCCTAATTTATAATTTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 324021 74 - 4471408 TCCCAAAGTTTGATATTCAACAGACTTGTTTCTTTTTCTTTTCAGTTGACATGAAAGCCTAATTTATAATTTTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3931625 69 - 30143674 TCTCAAATTTTGGTATTCAACAGACTT-----TTTTCCTTATTAGTTGATATTAGGGTCTAATTTATAGTTTTT i micMur3.chr22 I 159 C 0 s otoGar3.GL873654 5441892 29 + 5549422 TCTCAAATTTTGGTATTTAAcag-----------------------------tagagt---------------- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4577588 74 - 122678785 TCTCACATTTTGGTATTCAACAGACTTGTTTTTCTTCCTTATCAATCAGTATTGGAGCCTAATTTATAATTTTT i canFam3.chr1 C 0 I 57 s dasNov3.JH563638 280810 74 + 643850 TCCCAAATTTTGATATTCATTGGACTTGTCTCTTTTCCTTTTAGGTTGATATTAGAATCTAATTTATCAATTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=97405.000000 s hg38.chr19_GL383574v1_alt 34675 9 + 155864 AGTTCATGT s panTro5.chr19 36103292 9 + 61309027 AGTTCATGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849351 9 + 64411610 AGTTCATGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267084 9 - 8369475 AGTTCATGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861847 9 - 106955855 AGTTCATGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170331 9 + 53671032 AGTTCATGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623202 9 + 59248254 AGTTCATGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4490987 9 - 13342542 AGTTCATGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421799 9 + 7714307 AGTTCATGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229028 9 + 50890351 AGTTCATGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852617 9 - 2385121 AGTTCATGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2288569 9 + 4274983 AGTTCATGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28521900 9 + 49145316 AGTTCATGT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576477 9 - 2680843 AGTTCATGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 324095 9 - 4471408 AGTTCATGT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3931694 9 - 30143674 AGTTTATGT i micMur3.chr22 C 0 I 18 s dasNov3.JH563638 280884 8 + 643850 AGTTTACT- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e otoGar3.GL873654 5441921 0 + 5549422 C e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4577662 57 - 122678785 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=52470.000000 s hg38.chr19_GL383574v1_alt 34684 5 + 155864 CAAAA s panTro5.chr19 36103301 5 + 61309027 CAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849360 5 + 64411610 CAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267093 5 - 8369475 CAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861856 5 - 106955855 CAAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170340 5 + 53671032 CAAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623211 5 + 59248254 CAAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4490996 5 - 13342542 CAAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421808 5 + 7714307 CAAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229037 5 + 50890351 CAAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852626 5 - 2385121 CAAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2288578 5 + 4274983 CAAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28521909 5 + 49145316 CAAAA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576486 5 - 2680843 AAAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 324104 5 - 4471408 CAAAA i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 280892 5 + 643850 CAAAA i dasNov3.JH563638 C 0 I 78 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931703 18 - 30143674 I e otoGar3.GL873654 5441921 0 + 5549422 C e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4577662 57 - 122678785 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=229685.000000 s hg38.chr19_GL383574v1_alt 34689 28 + 155864 AAAAGTTCAggccgggtgtggtggctca s panTro5.chr19 36103306 28 + 61309027 AAAAGTTCAggccgggtgtggtggctca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849365 28 + 64411610 AAAAGTTCAggccgggtgtggtggctca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267098 28 - 8369475 AAAAGTTCAggccaggtatggtggctca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861861 28 - 106955855 AAAAGTTCAggctgggtgtggtggctca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170345 28 + 53671032 AAAAGTTCAggccgggtgcagtggctca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623216 28 + 59248254 AAAAGTTCAggccgggtgcagtggctca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4491001 28 - 13342542 AAAAGTTCAggccgggtgcagtggctca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421813 28 + 7714307 AAAAGTTCAggccgggtgcagtggccca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229042 28 + 50890351 AAAAGTTCAggccgggtgcagtggctca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852631 28 - 2385121 AAAAGTTCAggccaggtgcagtggctca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2288583 28 + 4274983 AAAAGTTCAAgccgggtgcagtggctca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28521914 28 + 49145316 AAAAGTTAAggctggacgtggtggctca i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576491 28 - 2680843 AAAAGTTAAggctgggcatggtagctca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 324109 28 - 4471408 AAAAGTTAAggctgggcgtggtggctca i aotNan1.NW_018505377v1 C 0 I 4317 s otoGar3.GL873654 5441921 11 + 5549422 --------------gctgtagtgtc--- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931703 18 - 30143674 I e dasNov3.JH563638 280897 78 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4577662 57 - 122678785 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=572692.000000 s hg38.chr19_GL383574v1_alt 34717 80 + 155864 cacctgtcatcccaactctttgggagtccaaggcgggcagatcataaggtcaggagatcgagaccatcctggccaacatg s panTro5.chr19 36103334 80 + 61309027 cacctgtcatcccaactctttgggagtccaaggcgggcagatcataaggtcaggagatcgagaccatcctggccaacatg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849393 80 + 64411610 cacctgtcatcccaactctttgggagtccaaggcgggcagatcataaggtcaggagatcgagaccatcctggccaacatg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267126 80 - 8369475 cacctgtcatcccaactctttgggagtccaaggcgggcagatcataaggtcaggagatcgagaccatcctggccaacatg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861889 80 - 106955855 cgcctgtcatcccaactctttgggaggccgaggtgggcagatgataaggtcaggagatcaagaccatcctggccaatgtg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170373 80 + 53671032 cacctgtaatcccaactctttgggaggccaaggcaggcggatcacaaggtcaggagatcgagaccatcctggccaacatg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623244 80 + 59248254 cacctgtaatcccaactctttgggaggccaaggcaggcggatcacaaggtcaggagatcgagaccatcctggccaacatg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4491029 80 - 13342542 cacctgtaatcccaactctttgggaggccaaggcaggcggatcacaaggtcaggagatcgagaccatcctggccaacatg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421841 80 + 7714307 cacctgtaatcccaactctttgagaggccaaggcaggcggatcacaaggtcaggagatcgagaccatcctggccaacatg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229070 80 + 50890351 cacctgtaatcccaactctttgggaggccaagggaggcggatcacaaggtcaggagatcgagaccatcctggccaacatg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852659 80 - 2385121 cacctgtaatcccaactctttgggaggccaaggcaggtggatcacaaggtcaggagatcgagaccatcctggccaacatg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2288611 80 + 4274983 cacctgtaatcccaactctttgggaggccaaggcaggtggatcacaaggtcagaagatcgagaccatcctggccaacatg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28521942 80 + 49145316 tatctgtaatcccagcacattgggaggctgaggcaggtagatcacaaggtcaggagatcaagaccatcctgggcaacatg i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576519 80 - 2680843 tgtctgtaatctcagcacattgggaggctgaggtgggtggatcacaaggtcagcagatcaagaccatcctggccaacatg i cebCap1.NW_016107633v1 C 0 I 3 s otoGar3.GL873654 5441932 11 + 5549422 ------------------------------------acagctcacag--------------------------------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931703 18 - 30143674 I e dasNov3.JH563638 280897 78 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4577662 57 - 122678785 I e aotNan1.NW_018505377v1 324137 4317 - 4471408 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=112632.000000 s hg38.chr19_GL383574v1_alt 34797 16 + 155864 gtgaaacccagtctct s panTro5.chr19 36103414 16 + 61309027 gtgaaacccaatctct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849473 16 + 64411610 gtgaaacccaatctct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267206 16 - 8369475 gtgaaacccagtctct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861969 16 - 106955855 gtgaaacccagtctct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170453 16 + 53671032 gtgaaacccagtctct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623324 16 + 59248254 gtgaaacccaggctct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4491109 16 - 13342542 gtgaaacccagtctct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421921 16 + 7714307 gtgaaacccagtctct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229150 16 + 50890351 gtgaaacccagtctct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852739 16 - 2385121 gtgaaacccagtctct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2288691 16 + 4274983 gtgaaacccagtcttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28522022 16 + 49145316 gtgaaaccctgtctct i calJac3.chr22 C 0 C 0 s otoGar3.GL873654 5441943 8 + 5549422 --------cagcctcc i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931703 18 - 30143674 I e dasNov3.JH563638 280897 78 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4577662 57 - 122678785 I e aotNan1.NW_018505377v1 324137 4317 - 4471408 I e cebCap1.NW_016107633v1 1576599 3 - 2680843 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=873458.000000 s hg38.chr19_GL383574v1_alt 34813 177 + 155864 aat-----tt-aaaaaaaaaaa--aatacaaacattagcctgggcgt-agtggtgcacacctgtagttccagttactcaggaggctgaggcaggagaattacttgaacccaggaagcagaggttgcggtgagacgagatcgcgccactgca--ctccagcctaagcaacagaccaagactcggtctc-a s panTro5.chr19 36103430 178 + 61309027 aat-----tt-aaaaaaaaaaa--aatacaaacattagcctgggcgt-agtggtgcacacctgtagttccagttactcaggaggctgaggcaagagaattacttgaacccaggaagcggaggttgcggtgagacgagatcgcgccactgca--ctccagcctaggcgacagaccaagactcggtctcaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849489 178 + 64411610 aat-----tt-aaaaaaaaaca--aaaacaaacattagcctgggcgt-agtggtgcacacctgtagttccagttactcaggaggctgaggcaagagaattacttgaacccaggaagcggaggttgcggtgagacgagatcgcgccactgca--ctccagcctaggcgacagaccaagactcggtctcaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267222 179 - 8369475 aat-----ttaaaaaaaaaaaa--aatacaaacattagcctgggcgt-agtggtgcacacctgtagttccagttactcaggaggctgaggcaggagaattacttgaacccaggaagcggaggttgcggtgagacgagatcgcgccactgca--ctccagcctaggcgacagaccaagactcggtctcaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63861985 180 - 106955855 aat-----ta-aaaaaataataataatacaaacattagcctgggcgt-ggtggtgcgcacctgtagttccagttactcgggaggctgaggcagaagaattacttgaacccaggaagtggaggttgcagtgagccgagatcgtgccactgca--ctccagcctaggcgacagatcaagactccgtttcaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170469 179 + 53671032 aat---aaaa-aaaaagaaaaa--aatataaa-attagcccgggcat-ggtgatgcacacctgtagtcccagctacttgggaagctgaggcaggaaaattgcttgaacccaggaagcggaggttgcagtgagccgagatcacgccactgca--ctccagcctgggcaacagatcaagactctgtctcaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623340 180 + 59248254 aat--aaaaa-aaaaagaaaaa--aatataaa-attagcccgggcat-ggtgatgcgcacctgtagtcccagctacttgggaagctgaggcaggaaaattgcttgaacccaggaagcggaggttgcagtgagccgagatcacgccactgca--ctccagcctgggcaacagatcaagactctgtctcaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4491125 180 - 13342542 aat--aaaaa-aaaaagaaaaa--aatataaa-attagtccgggcat-ggtgatgcacacctgtagtcccagctacttgggaggctgaggcaggaaaatcgcttgaacccaggaagcggaggttgcagtgagccgagatcgcgccactgca--ctccagcctgggcaacagatcaagactctgtctcaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5421937 179 + 7714307 aat---taaa-aaaaagaaaaa--aatataaa-attagcccgggcat-ggtgatgcgcacctgtagtcccagctacttgggaggctgaggcaggaaaatcgcttgaacccaggaagcggaggttgcagtgagccgagatcgcgccactgca--ctccagcctgggcaacagatcaagactctgtctcaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229166 182 + 50890351 aataaaaaaa-aaaaagaaaaa--attacaaa-attagcccgggcat-ggtggtgcgcacctgtagtcccagctacttgggaggctgaggcaggaaaattgcttgaacccaggaagtggaggttgcagtgagccgagatcgcgccactgca--ctccagcctgggcaacagatcaagactctgtctcaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852755 180 - 2385121 aat--aaaaa-aaaaagaaaaa--aatataaa-attagcccgggcat-ggtgatgcgcacctgtagtcccagctacttgggaggctgaggcaggaaaatcgcttgaacccaggaagcggaggttgcagtgagccgagatcgcgccactgca--ctccatcctgggcaacagatcaagactctgtctcaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2288707 178 + 4274983 aat----aaa-aaaaagaaaaa--aatacaaa-attagcccgggcat-ggtggtgcgcacctgcagtcccagctactcgggaggctgaggcaggagaatctcttgaacctaggaagcagaggttgcagtgagccgagatcgcgccactgca--ctccagcctgggcaacagatcaagactctgtctcaa i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5441951 90 + 5549422 -------------------------------a-act--cctgggcttaaatggt-----tctcttgcctcagcctcccaagtagctgggactgcag-------------------------------gtga------------ccaccacaacttctagct----------------attttatttta- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931703 18 - 30143674 I e dasNov3.JH563638 280897 78 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4577662 57 - 122678785 I e aotNan1.NW_018505377v1 324137 4317 - 4471408 I e cebCap1.NW_016107633v1 1576599 3 - 2680843 I e saiBol1.JH378197 5362430 3352 + 8899380 I e calJac3.chr22 28522038 0 + 49145316 C a score=317078.000000 s hg38.chr19_GL383574v1_alt 34990 72 + 155864 aaaaa-------aaaaaaa---aaGTTCAGGCTTTGG-----------GAA--A-tttttttttttttcttttgagac--agtcttactctgttgctg s panTro5.chr19 36103608 71 + 61309027 aaaaa-------aaaaaaa---aaGTTCAGGCTTTGG-----------GAA--A--ttttttttttttcttttgagac--agtcttactctgttgctg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849667 69 + 64411610 aaaaa-------aaaaaaa---aaGTTCAGGCTTTGG-----------GAA--A----ttttttttttcttttgagac--agtcttactctgttgctg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267401 71 - 8369475 aaaaa-------aaaaaaa---aaGTTCAGGCTTTGG-----------GAA--A--ttttttttttttcttttgagac--agtcttactctgttgctg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63862165 75 - 106955855 aaaaa-------aaaaaaaaagaaGTTCAGGCTTTGG-----------GAA--A-tttttttcttcttcttttgagac--agtcttactctgttgctc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170648 80 + 53671032 ataaaataaagtaaaataa---aaGTTCAGTCTTTGG-----------GAA--tttttttttttttttcttttgagac--aggcttactctgttgctt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623520 80 + 59248254 ataaaataaagtaaaataa---aaGTTCAGTCTTTGG-----------GAA--tttttttttttttttcttttgagac--aggcttactctgttgctt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4491305 80 - 13342542 ataaaataaagtaaaataa---aaGTTCAGTCTTTGG-----------GAA--tttttttttttttttcttttgagac--aggcttactctgttgctt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5422116 79 + 7714307 ataaaataaagtaaaataa---aaGTTCAGTCTTTGG-----------GAA---ttttttttttttttcttttgagac--aggcttactctgttgttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229348 82 + 50890351 ataaaataaagtaaaataa---aaGTTCAGTCTTTGG-----------GAAtttttttttttttttttcttttgagac--aggcttactctgttgctt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 852935 80 - 2385121 ataaaataaagtaaaataa---aaGTTCAGTCTTTGG-----------GAA--tttttttttttttttcttttgagac--aggcttactctgttgctt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2288885 67 + 4274983 ataaaataaagtaaaataa---aaGATCAGGCTTTGG-----------GAA--TTTTGTTTTTTTCTt---------------cttactctgttgctc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28522038 85 + 49145316 -aaaa-------aagaaaa---aagttTAGGCTTTGatttatttatgttta--tttatttatttatttttttaaagacagagtcttactctgttgccc i calJac3.chr22 C 0 C 0 s otoGar3.GL873654 5442041 39 + 5549422 ---------------------------------------------------------ttttattttttttGtagagacagagtctcacttcatcac-- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931703 18 - 30143674 I e dasNov3.JH563638 280897 78 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4577662 57 - 122678785 I e aotNan1.NW_018505377v1 324137 4317 - 4471408 I e cebCap1.NW_016107633v1 1576599 3 - 2680843 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=975958.000000 s hg38.chr19_GL383574v1_alt 35062 129 + 155864 aggctgtagtgtagtggtgtgat----cataactcactgcaacctccgcttctggggttcaggcaattctcatgcctcagcctcccaagtagctgggattacaggcgtgtgccaccacaaccggctaattttt s panTro5.chr19 36103679 129 + 61309027 aggctgtagtgtagtggtgtgat----cataactcactgcaacctccgcttctggggttcaggcaattctcatgtctcagcctcccaagtagctgggattacagccgtgtgccaccacaaccggctaattttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849736 129 + 64411610 aggctgtagtgtagtggtgtgat----cataactcactgcaacctccgcttctggggttcaggcaattctcatgtctcagcctcccaagtagctgggattacagccgtgtgccaccacaaccggctaattttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267472 129 - 8369475 aggctgtagtgtagtggtgtgat----cataactcactgcaacctccgcttctggggttcaggcaattctcatgcctcagcctcccaagtaactgggattacaggtgtgtgccaccacaaccggctaattttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63862240 129 - 106955855 aggctgtagtgtagtggtgtgat----cataactcactgcaacctccacctctggggttcaggcaattctcatgcctcagcctcctgagtagctgggattacaggtgtgtgccaccacaaccggctaattttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170728 127 + 53671032 gggctgtactgcagtgatgtgac----ctcaactcattgcaacctccacttcctgggttcaagcaattctcatgcctcagcctcccgagtagct-ggattacaggtgtgtgcca-cacaaccggctaattgtt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623600 129 + 59248254 gggctgtactgcagtgatgtgac----ctcaactcattgcaacctccacttcctgggttcaagcaattctcatgcctcagcctcccgagtagctgggattacaggtgtgtgccaccacaaccggctaattgtt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4491385 129 - 13342542 gggctgtactgcagtgatgtgac----ctcaactcattgcaacctccacttcctgggttcaagcaattctcatgcctcagcctcccgagtagctgggattacaggtgtgtgccaccacaaccggctaattgtt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5422195 129 + 7714307 gggctgtactgcagtgatgtgac----ctcaactcattgcaacctccacttcctgggttcaagcaattctcatgcctcagcctcccgagtagctgggattacaggtgtgtgccaccacaaccggctaattttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229430 127 + 50890351 gggctgtactgcagtgatgtgac----ctcaactcattgcaacctccacttcctgggttcaagcgattctcatgcctcagcctcccaagtagctgggattacaggtgtgtgccaccacaaccggctaa--ttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 853015 129 - 2385121 gggctgtactgcagtgatgtgac----ctcaactcattgcaacctccacttcctgggttcaagcaattctcatgcctcagcctcccgagtagctgggattacaggtgtgtgccaccacaaccggctaattttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2288952 124 + 4274983 aggctgtactgcagtaatgtgat----ctcaactcactgcaacctccacttcctgggttcaagcgattctcattcctcagcctcctgagtagctgggattacaggtatgtaccaccacaactggctaa----- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28522123 121 + 49145316 aggatggaatgcagtggtatgat----ctcagctcactgcaacctctgcctccagggttcaagtgattttcatgcctcaacctcccaagtagctgggattacaggcgtgtgccaccccaactggc-------- i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576602 126 - 2680843 aggctggagtgcagtggtatgat----ctcagctcactgcagcctctgccttcagggttcaagcgattttcatgcctcaacctcccaagtagctgggattacaggcgtgtgccaccccaactggct---tttt i cebCap1.NW_016107633v1 I 3 C 0 s otoGar3.GL873654 5442080 130 + 5549422 ---ccttagtagagtactgtggcatcacacagctcacagcaacctccagctcctgggctcaggtgattctcttgcctcagcctccccagtagctgggactacaggcgcctgccacaatgcctggctatttttt i otoGar3.GL873654 C 0 I 331 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931703 18 - 30143674 I e dasNov3.JH563638 280897 78 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4577662 57 - 122678785 I e aotNan1.NW_018505377v1 324137 4317 - 4471408 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=200624.000000 s hg38.chr19_GL383574v1_alt 35191 56 + 155864 gtttttgttt--tttcttaaattagagacagaggtttcaccatgttggctaggctggg s panTro5.chr19 36103808 56 + 61309027 gtttttgttt--tttcttaaattagagacagaggtttcaccatgttggctaggctggg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849865 55 + 64411610 gtttttg-tt--tttcttaaattagagacagaggtttcaccatgttggctaggctggg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267601 56 - 8369475 gtttttgttt--tttcttaaattagagacagaggtttcaccatgttggctaggctggg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63862369 50 - 106955855 tttt----tt--tttttttaattagagac--aggtttcgccatgttggctaggctggt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170855 55 + 53671032 ttttgtt-tttgttttgttttttagagac--agatttcgccatgttggctgggctggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623729 53 + 59248254 ttttgtt-tt--ttgttttttttagagac--agatttcgccatgttggctgggctggt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4491514 53 - 13342542 ttttgtt-tt--ttgttttttttagagac--agatttcgccatgttggctgggctggt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5422324 48 + 7714307 tttt--------tttttttttttagagac--agatttcgccatgttggctgggctggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229557 49 + 50890351 tttt-----t--tttttttttttagagac--agatttcgccatgttggctgggctggt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 853144 49 - 2385121 tttt-----t--tttttttttttagagac--agatttcgccatgttggctgggctggt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2289076 45 + 4274983 ---------t--ttttttttttttgagac--aggtttcgccatgttgactgggctggt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28522244 32 + 49145316 --------tt--ttttttttaatatagag--aga--------------cagagctggt i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576728 36 - 2680843 tttt----tt--tttttttttttaaatag--aga--------------cagggctggt i cebCap1.NW_016107633v1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931703 18 - 30143674 I e dasNov3.JH563638 280897 78 + 643850 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4577662 57 - 122678785 I e aotNan1.NW_018505377v1 324137 4317 - 4471408 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=466697.000000 s hg38.chr19_GL383574v1_alt 35247 62 + 155864 ctcaaactcccaacctcaggtgatctgcccaccttgccctcccaaagcgctgagactacaag s panTro5.chr19 36103864 62 + 61309027 ctcaaactcccaacctcaggtgatctgcccaccttgccctcccaaagcgctgagactacaag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849920 62 + 64411610 ctcaaactcccaacctcaggtgatctgcccaccttgccctcccaaagcgctgagactacaag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267657 62 - 8369475 ctcaaactcccaacctcaggtgatctgcccaccttgccctcccaaagcgctgagactacaag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63862419 28 - 106955855 ctcgaagtcccaacctcaagtgatctgc---------------------------------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170910 61 + 53671032 ctcgaactcccag-gtcaggtgatctgccaacttcactctcccaaagtgctgagactacagg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623782 62 + 59248254 ctcgaactcccagcctcaggtgatctgccaacttcactctcccaaagtgctgagactacagg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4491567 62 - 13342542 ctcgaactcccagcctcaggtgatctgccaacttcactctcccaaagtgctgagactacagg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5422372 62 + 7714307 ctcgaactcccagcctcaggtgatctgccaacttcactctcccaaagtgctgagactacagg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229606 62 + 50890351 ctcgaactcccagcctcaggtgatctgccaacttcactctcccaaagtgctgagactacagg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 853193 62 - 2385121 ctcgaactcccagcctcaggtgatctgccaacttcactctcccaaagtgctgagactacagg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2289121 62 + 4274983 ctcgaactcccagcctcaggtgatctgcccacctcactctcccaaagtgctgagactacagg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28522276 62 + 49145316 atcaaactcccaacctcaggtgatctgcccaccttggcctcccaaaatgctgagactacagg i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1576764 62 - 2680843 ctcaaactcccaacctcaggtgatctgcccgcctcggcctcccaaaatgctgagactacagg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 328454 62 - 4471408 ctcaaactcccaacctcaggtgatctgcttacctcagcctcccaaaatgctgagactacagg i aotNan1.NW_018505377v1 I 4317 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931703 18 - 30143674 I e dasNov3.JH563638 280897 78 + 643850 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4577662 57 - 122678785 I e saiBol1.JH378197 5362430 3352 + 8899380 I a score=191976.000000 s hg38.chr19_GL383574v1_alt 35309 21 + 155864 tgtgagccaccatgccc--agcc s panTro5.chr19 36103926 21 + 61309027 tgtgagccaccatgccc--agcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39849982 21 + 64411610 tgtgagccaccatgccc--agcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267719 21 - 8369475 tgtgagccaccatgccc--agcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63862447 15 - 106955855 ------ccaccATGCCC--AGCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170971 21 + 53671032 tgcgagccaccatacct--ggcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623844 21 + 59248254 tgcgagccaccatacct--ggcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4491629 21 - 13342542 tgcgagccaccatacca--ggcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5422434 21 + 7714307 tgcgagccaccataccc--ggcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229668 23 + 50890351 tgcgagccaccatacccggGGCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 853255 21 - 2385121 tgcgagccaccataccc--ggcc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2289183 21 + 4274983 tgcgagccaccataccc--ggcc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28522338 21 + 49145316 tgtgagccaccatgccc--agcc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5365782 21 + 8899380 TGTAAGCCACCATGCCC--AGCC i saiBol1.JH378197 I 3352 C 0 s cebCap1.NW_016107633v1 1576826 21 - 2680843 tgtgagcctccatgccc--agcc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 328516 21 - 4471408 tgtgagccaccatgccc--agcc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931703 18 - 30143674 I e dasNov3.JH563638 280897 78 + 643850 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4577662 57 - 122678785 I a score=7098.000000 s hg38.chr19_GL383574v1_alt 35330 1 + 155864 T s panTro5.chr19 36103947 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39850003 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267740 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63862462 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170992 1 + 53671032 T i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623865 1 + 59248254 T i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4491650 1 - 13342542 T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5422455 1 + 7714307 T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229691 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 853276 1 - 2385121 T i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2289204 1 + 4274983 T i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4577719 1 - 122678785 T i canFam3.chr1 I 57 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931703 18 - 30143674 I e dasNov3.JH563638 280897 78 + 643850 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e aotNan1.NW_018505377v1 328537 0 - 4471408 C e cebCap1.NW_016107633v1 1576847 0 - 2680843 C e saiBol1.JH378197 5365803 0 + 8899380 C e calJac3.chr22 28522359 0 + 49145316 C a score=9100.000000 s hg38.chr19_GL383574v1_alt 35331 1 + 155864 G s panTro5.chr19 36103948 1 + 61309027 G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39850004 1 + 64411610 G i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267741 1 - 8369475 G i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63862463 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170993 1 + 53671032 G i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623866 1 + 59248254 G i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4491651 1 - 13342542 G i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5422456 1 + 7714307 G i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229692 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 853277 1 - 2385121 G i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2289205 1 + 4274983 G i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3931721 1 - 30143674 G i micMur3.chr22 I 18 C 0 s canFam3.chr1 4577720 1 - 122678785 G i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e dasNov3.JH563638 280897 78 + 643850 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e aotNan1.NW_018505377v1 328537 0 - 4471408 C e cebCap1.NW_016107633v1 1576847 0 - 2680843 C e saiBol1.JH378197 5365803 0 + 8899380 C e calJac3.chr22 28522359 0 + 49145316 C a score=1524110.000000 s hg38.chr19_GL383574v1_alt 35332 138 + 155864 GAAAATGTTAATAGTGTCA-TTT---------GGAGGG-TACTAGCTTCACTTAACTATGTATTTTAAGTATATAATGTT--TATCATGCTTAAATTTAGAACATTTTTGGTATTTTATAATGGAGGTATTGTATTGGGAAGTTTGTCACT s panTro5.chr19 36103949 138 + 61309027 GAAAATGTTAATAGTGTCG-TTT---------GGAGGG-TACTAGCTTCACTTAACTATGTATTTTAAGTATATAATGTT--TATCATGCTTAAATTTAGAACATTTTTGGTATTTTATAATGGAGGTATTGTATTGGGAAGTTTGTCACT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39850005 138 + 64411610 GAAAATGTTAATAGTGTCG-TTT---------GGAGGG-TACTAGCTTCACTTAACTATGTATTTTAAGTATATAATGTT--TATCATGCTTAAATTTAGAACATTTTTGGTATTTTATAATGGAGGTATTGTATTGGGAAGTTTGTCACT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267742 138 - 8369475 GAAAATGTTAATAGTGTCG-TTT---------GGAGAG-TACTAGCTTTACTTAACTATGTATTTTAAGTATATAATGTT--TATCATGCTTAAATTTAGAACATTTTTGGTATTTTATAATGGAGGTATTGTATTGGGAAGTTTGTCACT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63862464 139 - 106955855 GAAAATGTTAATAGTGTCA-TTT-G-------GGGGGG-TACTAGCTTTACTTAACTATGTATTTTAAGTATATAATGTT--TATCATGCTTAAATTTAGAACATTTTTGGTATTTTATAATGGAGGTATTGTATTGGGAAGTTTGTCACT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30170994 138 + 53671032 GAAAATGTTAATAGTGTCA-TTT---------GGGGGG-TACTAGCTTTACTTAAGTATGTATTTTAAGTATGTAATGTT--TATCATGCTTAAAGTTAGAACATTTTTGGTGTTTTATAATGGAGGTATGGTATTGGGAAGTTTGTCACT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34623867 138 + 59248254 GAAAATGTTAATAGTGTCA-TTT---------GGGGGG-TACTAGCTTTACTTAAGTATGTATTTTAAGTATGTAATGTT--TATCATGCTTAAAGTTAGAACATTTTTGGTGTTTTATAATGGAGGTATGGTATTGGGAAGTTTGTCACT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4491652 138 - 13342542 GAAAATGTTAATAGTGTCA-TTT---------GGAGGG-TACTAGCTTTACTTAAGTATGTATTTTAAGTATGTAATGTT--TATCATGCTTAAAGTTAGAACATTTTTGGTGTTTTATAATGGAGGTATGGTATTGGGAAGTTTGTCACT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5422457 138 + 7714307 GAAAATGTTAATAGTGTCA-TTT---------GGGGGG-TACTAGCTTTACTTAAGTATGTATTTTAAGTATGTAATGTT--TATCATGCTTAAAGTTAGAACATTTTTGGTATTTTATAATGGAGGTATGGTATTGGGAAATTAGTCACT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229693 138 + 50890351 GAAAATGTTAATAGTGTCA-TTT---------GGCGGG-TACTAGCTTTACTTAAGTATGTATTTTAAGTATGTAATGTT--TATCATGCTTAAAGTTAGAACATTTTTGGTGTTTTATAATGGAGGTATGGTATTGGGAAGTTTGTCACT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 853278 138 - 2385121 GAAAATGTTAATAGTGTCA-TTT---------GGGGGG-TACTAGCTTTACTTAAGTATGTATTTTAAGTATGTAATGTT--TATCATGCTTAAAGTTAGAACATTTTTGGTGTTTTATAATGGAGGTATGGTATTGGGAAGTTTGTCACT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2289206 139 + 4274983 GAAAATGTTAATAGTGTCATTTT---------GGGGGG-TACTGGCTTTACTTAAGTATGTATTTTAAGTATATAATGTT--TATCATGCTTAAAGTTAGAACATTTTTGGTATTTTATAATGGAGGTATGGTACTGGGAAGTTTGTCACT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28522359 133 + 49145316 -----------TAGTGTCA-ATTTGGGGGGGTGGGGGG-TACTAGGTTCACTTAAGTATGTATTTTAAGTAT---ATGTT--TATCATGCTTAAACTTAGAACGTTTTCGGTATTTTATAATAGAGATATTATATTGGGAAATTTGTTGCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5365803 129 + 8899380 -----------TAGTGTCA-ATTTA-------GGGGGG-TACTAGATTCACTTACTTACGTATTTTAAGTATATAATGTT--TATCATGTTTAAACTTAGAACGTTTTCGGTATTTTATAATAGAGATATTGTATTGGCAAGTTTGTCACT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1576847 129 - 2680843 -----------TAGTGTCA-ATTTG-------GGGGGG-TACTAGCTTCACTTAAGTATTTATTTTAAGTATATAATGTT--TATCATGCTCAAACTTAGACCGTTTTCGGTATTTTGTAATAGAGATATTGTATTGGGAAGTTTGTTGCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 328537 126 - 4471408 -----------TAGTGTCA-ATTTG-------GGGGAG-TACTAGCTTCACTTAAGTATGTATTTTAAATATGTAATATT--TATCATGCTTAAACTTAGAACGTTTT---TATTTTATAATAGAGATATTGTATTGGGAGGTTTGTCGCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3931722 135 - 30143674 GAAAATGT---TAATGTCA-TTT---------GGGGGGTTACTAACTTTACTTAACTACGTATTTTAAGTATATAATGTT--TGCCATGTTTAAACTTAGAAGGTTTT-GGTATTTTATAATGGAGGTATTGTGTTGGGAAGTTTGTTACT i micMur3.chr22 C 0 I 56 s canFam3.chr1 4577721 113 - 122678785 GAAAATACTAATGATGTCA----------------------CTAACTGTATTTAACTATGTAT------------GTGTA--TATCAT-TTTAAACTTACAAAACTTT-GGTATTTTATATTGGAGATATTAAAATAGGAAGTTCGTCGTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 280975 135 + 643850 GAAAATGCTAATGATGTCA-TGG---------AGAGGA-TTCTAACTA----TAATTATGTAGATTAAGTATATAATGTTTATATCCTGTTTAAGCTTAGCGAATATA-GATATTTTATAATATAGGTATTATACTGAGGAGTTGGTCATT i dasNov3.JH563638 I 78 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=608604.000000 s hg38.chr19_GL383574v1_alt 35470 60 + 155864 ACAACTTATTTCTCTGGCCTTGTACTATGATTTTATATACAAGTAT---TATATACACTAAC-A s panTro5.chr19 36104087 60 + 61309027 ACCACTCATTTCTCTGGCCTTGTACTATGATTTTATATACAAGTAT---TATATACACTAAC-A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39850143 60 + 64411610 ACCACTCATTTCTCTGGCCTTGTACTATGATTTTATATACAAGTAT---TATATACACTAAC-A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267880 60 - 8369475 ACGACTCATTTCTCTGGCCTTGTACTATGATTTTATATACAAGTAT---TATATACACTAAC-A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63862603 60 - 106955855 ACAACTCATTTCTCTGGCCTTGTACTATGATTTTATATACAAGTAT---TATATACACTAAC-A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30171132 60 + 53671032 ACAACTCATTTCTCTGGCCTTGTACTATGATTGTATATACAAGTAT---TGTATACACTAAC-A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34624005 60 + 59248254 ACAACTCATTTCTCTGGCCTTGTACTATGATTGTATATACAAGTAT---TGTATACACTAAC-A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4491790 60 - 13342542 ACAACTCATTTCTCTGGCCTTGTACTATGATTGTATATACAAGTAT---TGTATACACTAAC-A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5422595 60 + 7714307 ACAACTCATTTCTCTGGCCTTGTACTATGATTGTATATACAAGTAT---TGTATACACTAAC-A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229831 60 + 50890351 ACAACTCATTTCTCTGGCCTTGTACTATGATTGTATATACAAGTAT---TGTATACACTAAC-A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 853416 60 - 2385121 ACAACTCATTTCTCTGGCCTTGTACTATGATTGTATATACAAGTAT---TGTATACACTAAC-A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2289345 60 + 4274983 ACAACTCATTTCTCTGGCCTTGTACTATGATTGTATATACAAGTAT---TATATACACCAAC-A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28522492 60 + 49145316 ACAACTCACTTCTCTGGCCTTTTACCATGATTGTATGTACAAGTAT---TA-ATACACTGATGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5365932 59 + 8899380 ACAACTCACTTCTCTGGCCTTTTACTATGATTGTATGTACAAGTAT---TA-ATACACTGAT-A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1576976 59 - 2680843 ACAACTCACTTCTCTGGCCTTTTACTGTGATTGTATGTACAAGTAT---AT-ACAATCTGAT-A i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 328663 59 - 4471408 ATAACTCACTTCTCTGGCCTTTTACTCTGATTGTATGTACAAGTAT---TA-ATACATTGAT-G i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4577834 59 - 122678785 ATAACTCTTCCCTCTCTCCATGTAATGTGACTGTGTGTACAGGTGT---TA-ATATACTGGT-A i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 281110 56 + 643850 -------ACCCCTCCAACCATATTCTGTGACTGCATGTGCAGGTATATATATATACCTTGGT-A i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931857 56 - 30143674 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=367666.000000 s hg38.chr19_GL383574v1_alt 35530 32 + 155864 ACCA-GTTTGGCATTAGGATGATGTTTGAGCTT s panTro5.chr19 36104147 32 + 61309027 ACCA-GTTTGGCATTAGGATGATGTTTGAGCTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39850203 32 + 64411610 ACCA-GTTTGGCATTAGGATGATGTTTGAGCTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267940 32 - 8369475 ACCA-GTTTGGCTTTAGGATGATGTTTGAGCTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63862663 32 - 106955855 ACCA-GTTTGGCATTAGGATGATGTTTGAGCTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30171192 31 + 53671032 ACCA-GTTTGACATTAGGATGATG-TTGAGTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34624065 31 + 59248254 ACCA-GTTTGACATTAGGATGATG-TTGAGTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4491850 31 - 13342542 ACCA-GTTTGACATTAGGATGATG-TTGAGTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5422655 31 + 7714307 ACCA-GTTCGACATTAGGATGATG-TTGAGCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229891 31 + 50890351 ACCA-GTTTGACATTAAGATGATG-TTGAGCTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 853476 30 - 2385121 ACCA-GTTTGACATTAGGATGATG--TGAGCTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2289405 32 + 4274983 ACCA-GTTTGACATTAGGATGTTGTTTGAGCTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28522552 32 + 49145316 ACCA-GTTTGGCATTAGGATCATGTTTGAGCTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5365991 32 + 8899380 ATCA-GTTTGGCATTGGGATCATGTTTGAGCTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1577035 32 - 2680843 ACTA-GTTTGGCATTAGGATCATGTTTGAGCTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 328722 32 - 4471408 ACCA-GTTTGGCATTAGGATCATGTTTGAGCTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3931913 32 - 30143674 ACCA-GTTTGGCATTAGGATGATGTTTGAGCTT i micMur3.chr22 I 56 I 327 s canFam3.chr1 4577893 32 - 122678785 ACTAGGTTTGACACTAGTGTGATGTTCAAACT- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 281166 33 + 643850 ACCAGGTTTGGTTTTAGGGTGATATTTGAACTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=1042875.000000 s hg38.chr19_GL383574v1_alt 35562 148 + 155864 AACTAAATCTGGAGACTGGATTAGATGAGTGAT-TTTGCCAAATAATTTGACCCtgtt----------tt---------------------------------------gttgttgt-----tgttgt----------------tgtttg--tttttTTAATG---------------------------CATGTGATGCATTTCTA--TTAATAAATCTTTGGTGTTATTTCAAGCTAGAAATATAAAA s panTro5.chr19 36104179 148 + 61309027 AACTAAATCTGGAGACTGGATTAGATGAGTGAT-TTTGCCAAATAATTTGACCCtgtt----------tt---------------------------------------gttgttgt-----tgttgt----------------tgtttg--tttttTTAATG---------------------------CATGGGATGCATTTCTA--TTAATAAATCTTTGGTGTTATTTCAAGCTAGAAATATAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39850235 148 + 64411610 AACTAAATCTGGAGACTGGATTAGATGAGTGAT-TTTGCCAAATAATTTGACCCtgtt----------tt---------------------------------------gttgttgt-----tgttgt----------------tgtttg--tttttTTAATG---------------------------CATGGGATGCATTTCTA--TTAATAAATCTTTGGTGTTATTTCAAGCTAGAAATATAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6267972 153 - 8369475 AACTAAATCTGGAGACTGGATTAGATGAGTGAT-TTTGCCAAATAATTTGACCCtgtt----------tt---------------------------------------gttgttgttgttgtgttgt----------------tgtttg--tttttTTAATG---------------------------CATGGGATGCATTTCTA--TTAATAAATCTTTGGTGTTATTTCAAGCTAGAAATATAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63862695 158 - 106955855 AACTAAATCTGGAGACTGGATTAGATGAGTGAT-TTTGCCAAATAATTTGACCCtgtttttttttttgtt---------------------------------------gttgttgt-----tgttgt----------------tgtttg--tttttttAATG---------------------------CATGGGATGCATTTCTA--TTAATAAATCTTTGGTGTTATTTCAAGCTAGAAATATAAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30171223 148 + 53671032 GTCTAAATCTGGAGACTGGATTAGATGAGTGAT-TTTGCCAAATAATTTGACCCTGTT----------t-----------------------------------------ttgtttg-----ttcatt----------------tatttg--tttgtttgATG---------------------------CATGGAATGCATTTCTATTTTAAAAAATCTTTGGTGTTATTTCGAGCTAGAAATAGAAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34624096 148 + 59248254 GTCTAAATCTGGAGACTGGATTAGATGAGTGAT-TTTGCCAAATAATTTGACCCTGTT----------t-----------------------------------------ttgtttg-----ttcatt----------------tatttg--tttgtttgATG---------------------------CATGGAATGCATTTCTATTTTAAAAAATCTTTGGTGTTATTTCGAGCTAGAAATAGAAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4491881 148 - 13342542 GTCTAAATCTGGAGACTGGATTAGATGAGTGAT-TTTGCCAAATAATTTGACCCTGTT----------t-----------------------------------------ttgtttg-----ttcatt----------------tatttg--tttgtttgATG---------------------------CATGGAATGCATTTCTATTTTAAAAAATCTTTGGTGTTATTTCGAGCTAGAAATAGAAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5422686 148 + 7714307 GTCTAAATCTGGAGACTGGATTAGATGAGTGAT-TTTGCCAAATAATTTGACCCTGTT----------t-----------------------------------------ttgtttg-----ttcgtt----------------tatttg--tttgtttgATG---------------------------CATGGAATGCATTTCTATTTTTAAAAATCTTTGGTGTTATTTCGAGCTAGAAATAGAAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29229922 147 + 50890351 GTCTAAATCTGGAGACTGGATTAGATGAGTGAT-TTTGCCAAACAATTTGACCCTGTT----------t-----------------------------------------ttgtttg-----ttcgtt----------------tatttg--tttgtttgATG---------------------------CATGGAATGCATTTCTA-TTAAAAAAAACTTTGGTGTTATTTCGAGCTAGAAATAGAAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 853506 148 - 2385121 GTCTAAATCTGGAGACTGGATTAGATGAGTGAT-TTTGCCAAATAATTTGACCCTGTT----------t-----------------------------------------ttgtttg-----ttcatt----------------tatttg--tttgtttgATG---------------------------CATGGAATGCATTTCTATTTAAAAAAATCTTTGGTGTTATTTCGAGCTAGAAATAGAAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2289437 139 + 4274983 GTCTAAATCTGGAGACTGGATTAGATGAGTGAT-TTTGCCAAATAATTTGACCCTGTT----------T-----------------------------------------TTGTTTG-----------------------------TTTG--TTTGTTTGATG---------------------------CATGGAATGCATTTCTA-TTAAAAAAATCTTTGGTGTTATTTCGAGCTAGAAATAGAAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28522584 131 + 49145316 GACTAATTCTGGAGACTGGATTAGATGAGTGATATTTGCCAAATAATTTGACCCTGGT----------TT------------------------------------------------------TTTT----------------GTTTTG--TTTTTTGAAGA---------------------------CATGGA----ATTTCTA------TTAATTTTTGTTATTATTTGGAGCTAGAAATGGAAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5366023 133 + 8899380 GACTAAATCTGGAGACTAGATTAGATGAGTGAT-TTTGCGAAATAATTTGACCCtgtt----------tt-----------------------------------------------------gtttt----------------gttttgttttttttAAAGA---------------------------CATGGA----ATTTCTA------TTAATCTTTGCTATTATTTGGAGATGGAAATGGAAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1577067 143 - 2680843 GACTAAATCTAGAGACTAGATTAGATGAGTGAT-TTTGCCAAATAATTTGACGCTGTt----------tt------------------------------------ttttttgttgt-----tgtttt----------------gttttg--ttttTTAAAGA---------------------------CATGGA----ATTTCTA------TTAATCTTTGTTATTATTTGGAGCTAGAAATGGAAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 328754 134 - 4471408 GACTAAATCTGGAGAC-----TAGATGAGTAAT-TTTGCCAAATAATTTGACCCTGtt----------tt----------------------------------------tttgttt-----tgtttt----------------gttttg--ttttttAAAGA---------------------------CATGGA----ATTTCTA------TAAATCTTTGTTATTATTTGGAGCTAGAAACTGAAAA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4577925 93 - 122678785 ---TTTATCT---------ATTAGAAGTAGAGT-TTT--------------------T----------T-----------------------------------------TTTTTAA-----GATTTC----------------TTTTTT--TTtttt-------------------------------------------ttttta-------agattttatttatttattcatgacagagagagagag i canFam3.chr1 C 0 I 356 s dasNov3.JH563638 281199 226 + 643850 GCTTTGATATGGAGAC-ATTTTAGATACGTGAT-TTTGCCACATACTTGCACCCAttc----------cttccttccttcctctctcttcctccctccctccttccttccttccttT-----TTTTTTAAAGGCAGTCATGAAATGTTTT--TTGTTTAGGTACTCAACCACTCAGCTACATCCACTCCCCGTGGAATGTATTTTTA--TTAATGAATCTGTGCTATTGTTTGTAGCCAGAAATAAG--- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931945 327 - 30143674 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=280476.000000 s hg38.chr19_GL383574v1_alt 35710 31 + 155864 TTGATTCTA-TTTTAAGACTAATAAAATTATT s panTro5.chr19 36104327 31 + 61309027 TTGATTCTA-TTTTAAGACTAATAAAACTATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39850383 31 + 64411610 TTGATTCTA-TTTTAAGACTAATAAAACTATT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6268125 31 - 8369475 TTGATTCTA-TTTTAAGACTAATAAAATTGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63862853 32 - 106955855 TTGATTCTATTTTTAAGACTAATAAAATTATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30171371 32 + 53671032 TTGATTCTTTTCTTGAGACTGATAAAATTATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34624244 32 + 59248254 TTGATTCTTTTCTTGAGACTGATAAAATTATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4492029 32 - 13342542 TTGATTCTTTTCTTGAGACTGATAAAATTATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5422834 32 + 7714307 TTGATTCTTTTCTTGAGACTGATAAAATTATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29230069 32 + 50890351 TTGATTCTTTTCTTGAGACTGATAAAATTATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 853654 32 - 2385121 TTGATTCTTTTCTTGAGACTGATAAAATTATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2289576 32 + 4274983 TTGATTCTTTTCTTGAGACTGATAAAATTATT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28522715 32 + 49145316 TTCATTATATTCTTAAGACTAATGAAATTATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5366156 32 + 8899380 TTGATTATATGCTTAAGACTAATAAAATTATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1577210 32 - 2680843 TTGATTATATTCTTAAGACTAATAAAATTATT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 328888 32 - 4471408 TTGATTATATTCTTAAAACTAATAAAATTATT i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 281425 28 + 643850 TTGATTATATTT----AATAGAGAAAATTATT i dasNov3.JH563638 C 0 I 1561 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931945 327 - 30143674 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4578018 356 - 122678785 I a score=2706823.000000 s hg38.chr19_GL383574v1_alt 35741 293 + 155864 Agctgggcatcatggctcacacctgtatgtaattccagcactttgggaggctgtggtggatggatcgcttgag--cccaggagttggagaccaacctgggcaacatggcgaaatcctatctctac--------aaaaaatacaaaaattagccaggtgtagt-gtgtgtgcctgtagttctagctactcaagagactgaggtggga-ggatagcttgagcttgggaggtaaaagttgcagtgagccgagatggcaccactgccctccaacctggactggatgacagagaagggacgctgtctca-------a s panTro5.chr19 36104358 293 + 61309027 Agctgggcatcatggctcacacctgtatgtaattccagcactttgggaggctgtggtggatggatcgcttgag--cccaggagttggagaccaacctgggcaacatggtgaaatcctatctctac--------aaaaaatacaaaaattagccaggtgtagt-gtgtgtgcctgtagttctagctactcaagagactgaggtggga-ggatagcttgagcttgggaggtgaaagttgcagtgagccgagatggcaccactgccctccaacctggactggatgacagagaagggacgctgtctca-------a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39850414 293 + 64411610 Agctgggcatcatggctcacacctgtatgtaattccagcactttgggaggctgtggtggatggatcgcttgag--cccaggagttggagaccaacctgggcaacatggcgaaatcctatctctac--------aaaaaatacaaaaattagccaggtgtagt-gtgtgtgcctgtagttctagctactcaagagactgaggtggga-ggatagcttgagcttgggaggtaaaagttgcagtgagccgagatggcaccactgccctccaacctggactggatgacagagaagggacgctgtctca-------a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6268156 294 - 8369475 Agctgggcatcatggctcacacctgtatgtaattccagcactttgggaggctgtggtggatggatcacttgag--cccaggagttggagaccaacctgggcaacatggcgaaatcctatctctac--------aaaaaatacaaaaattagccaggtgtagt-gtgtgtgcctgtagttctagctactcaagagactgaggtgggagggatagcttgagcttgggaggtaaaagttgcagtgagccgagatggcaccactgccctccaacctggactggatgacagagaagggatgctgtctca-------a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63862885 291 - 106955855 Agctgggcatcatggctcacacctgtatgtaattccagcactttgggaggctgtggtggatggattgcttgag--ctcaggagtcagagaccaacctgggcaacatggcgaaaccctatctctac--------aaaaaatacaaaaattagccaggtgtagt-gtgtgtgcctgtagttctagctactcaagagactgaggtggga-ggatagcttgagc-tgggaggtaaaagttgcagtgagccaagatggcaccattgcactccagcctggcctggatgaca-agaagggatgctgtctca-------a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30171403 293 + 53671032 Agctaggcatcatggcccacatc----tgtaatccaagcacttt----gggtgtggtggatggattgcctgaggcccagggaattggagaccaatctggg-aacatggcgaaaccccatctctac--------aaaaaatttaaaaattagccaggtgtagt-gtgtgtgcctgtagtcctagctactcaagagactgaggtggga-ggataacttgagcctgggaggtaaaagtttcagtgagccgagatggcaccactgcactccagcctggactggatgacagagaagggactctgtctcaataaaaga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34624276 296 + 59248254 Agctaggcatcatggcccacatc----tgtaatccaagcactttgggagggtgtggtggatggattgcctgag--cccaggaattggagaccaatctgggcaacatggcgaaaccccatctctac--------aaaaaatttaaaaattagccaggtgtagt-gtgtgtgcctgtagtcctagctactcaagagactgaggtggga-ggataacttgagcctgggaggtaaaagtttcagtgagccgagatggcaccactgcactccagcctggactggatgacagagaagggactctgtctcaataaaaga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4492061 294 - 13342542 Agctaggcatcatggcccacatc----tgtaatccaagcactttgggagggtgtggtggatggattgcctgag--cccaggaattggagaccaatctgggcaacatggcgaaaccccatctctac--------aaaaaatttaaaaattagccaggtgtagt-gtgtgtgcctgtagtcctagctactcaagagactgaggtggga-ggataacttgagcctgggaggtaaaagtttcagtgagccgagttggcaccactgcactccagcctggactggatgacagagaaggga--ctgtctcaataaaaga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5422866 296 + 7714307 Agctaggcatcatggcccacatc----tgtaatccaagcactttgggagggtgtggtggatggatcgcctgag--cccaggaattggagaccaatctgggcaacatggcgaaaccccatctctac--------aaaaaatttaaaaattagccaggtgtagt-gtgtgtgcctgtagtcctagctactcaagagactgaggtggga-ggatagcttgagcctgggaggtaaaagtttcagtgagccgagatggcaccactgcactccagcctggactggatgacagagaagggactctgtctcaataaaaga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29230101 296 + 50890351 Agctaggcatcatggcccacatc----tgtaatccaagcactttgggagggtgtggtagatggatcgcctgag--cccaggaattggagaccaatctgggcaacatggcgaaaccccatctctac--------aaaagatttaaaaattagccaggtgtagt-gtgtgtgcctgtagtcctagctactcaagagactgaggtggga-ggatagcttgagcctgggaggtaaaagtttcagtgagctgagatggcaccactgcactccagcctggactggatgacagagaagggactctgtctcaataaaaga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 853686 296 - 2385121 Agctaggcatcatggcccacatc----tgtaatccaagcactttgggagggtgtggtggatggatcgcctgag--cccaggaattggagaccaatctgggcaacatggcgaaaccccatctctac--------aaaaaatttaaaaattagccaggtgtagt-gtgtgtgcctgtagtcctagctactcaagagactgaagtggga-ggatagctcgagcctgggaggtaaaagtttcagtgaaccgagatggcaccactgcactccagcctggactggatgacagagaagggactctgtctcaataaaaga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2289608 286 + 4274983 Agctaggcatcatggcccacatc----tgtaatccaagcactttgggagggtgtggtggatggatcgcctgag--cccaggaattggagaccaatctgggcaacatggcgaaaccccatctctac--------aaaaaattaaaaaattagccaggtgtag-----------tgtagtcctagctactcaacagactgaggtggga-ggatagcttgagcctgggaggtaaaagtttcagtgagccgagatggcaccactgcactccagcctggactggatgacagagaagggactctatctcaataaaaga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28522747 297 + 49145316 Agctgggcactgtggctcacacc----tgtaatcccagcactttgggaggctgcagtgggtggatcatttgag--cccaggagttggagaccaacctgggcaacatggcaaaaccccatctctacaaaaaaaaaaaaaatacaaaaattagccaggtgtggtggtgtgcacctgtagtcctagctactcaggagactgaggtagga-ggatagcttgagcttgggaggtaaaagttgctgtgagccaagtttgcaccactttactccagcctggactggatgacaga-cagggaccctgtctca-------a i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5366188 296 + 8899380 Agctgggcactgtggctcacacc----tgtaatcccagcactttgggaggctgcagtgggtgtatcatttaag--cccaggagttggagaccaacctgggcaacatggcaaaaccccatctctac-aaaaaaaagaaaatacaaaaattagccaggtgtggtggtgtgtgcctgtagtcctagctactcaggagactgatgtagga-ggatagcttgagcttgggaggtaaaagttgcagtgagccaagattgcaccactctactccagcctggactggatgataga-cagagaccctgtctca-------a i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1577242 291 - 2680843 Agctgggcactgtggctcacacc----tgtaatcccagcactttgggaggctgcagtggatggatcatttgag--cccaggagttggagaccaaactgggcaacatggggaaactccatctctac------aaaaataatacaaaaattagccaggtgtggtggtgtgtgcctgtagtcctagctactcaggagactgaggtagga-ggatagcttgagcttgggaggtaaaagttgcagtgaaccaagattgcaccactctacttcagcctggactggatgacaga-cagggaccctgtctca-------a i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 328920 293 - 4471408 Agctgggcactgtgactcacacc----tgtaatcctagcactttgggaagctgcagtgagtgggttatttgag--cccaggagttggagaccaacctgggcaacatggcgaaaccccatctctac----aaaagaaaaatacaaaaattagccaggtgtggtggtgtgtgcctgtagtcctagctactcaggagactgaggtagga-ggatagcttgagcttgggagataaaagttgcagtgagctaagattgcaccactctactccagcctggactggatgacaga-cagggaccctgtctca-------a i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931945 327 - 30143674 I e dasNov3.JH563638 281453 1561 + 643850 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4578018 356 - 122678785 I a score=101579.000000 s hg38.chr19_GL383574v1_alt 36034 14 + 155864 aa-----aaagaaagaaaa s panTro5.chr19 36104651 14 + 61309027 aa-----aaagaaagaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39850707 14 + 64411610 aa-----aaagaaagaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6268450 14 - 8369475 aa-----aaagaaagaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63863176 14 - 106955855 aa-----aaagaaagaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30171696 14 + 53671032 aa-----aaagaaagaaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34624572 14 + 59248254 aa-----aaagaaagaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4492355 14 - 13342542 aa-----aaagaaagaaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5423162 14 + 7714307 aa-----aaagaaagaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29230397 14 + 50890351 aa-----aaagaaagaaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 853982 14 - 2385121 aa-----aaagaaagaaaG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2289894 10 + 4274983 aa---------aaagaaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28523044 18 + 49145316 aaaaaagaaagaaa-agaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5366484 13 + 8899380 aa-----aaagaaa-agaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1577533 17 - 2680843 aa-aaagaaagaaa-agaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 329213 13 - 4471408 aa-----aaagaaa-agaa i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4578374 14 - 122678785 AA-----AAAAAAAAATAG i canFam3.chr1 I 356 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931945 327 - 30143674 I e dasNov3.JH563638 281453 1561 + 643850 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=173481.000000 s hg38.chr19_GL383574v1_alt 36048 16 + 155864 aaTTATTAGGGCAATG s panTro5.chr19 36104665 16 + 61309027 aaTTATTAGGGCAATG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39850721 16 + 64411610 aaTTATTAGGGCAATG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6268464 16 - 8369475 aaTTATTAGGGCAATG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63863190 16 - 106955855 aaTTATTAGAGCAATG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30171710 16 + 53671032 CATTATTAAAGCAATG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34624586 16 + 59248254 CATTATTAAAGCAATG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4492369 16 - 13342542 CATTATTAAAGCAATG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5423176 16 + 7714307 CATTATTAAAGCAATG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29230411 16 + 50890351 CATTATTAAAGCAATG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 853996 16 - 2385121 CATTATTAAAGCAATG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2289904 16 + 4274983 CATTATTAAAGCAATG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28523062 16 + 49145316 aaTTATTAAAGCAATG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5366497 16 + 8899380 aaTTGTTAAAGCAACA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1577550 16 - 2680843 aaTTATTAAAGCAATG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 329226 16 - 4471408 aaTTATTAAAGCAATG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4578388 16 - 122678785 AATACTTAAAACAACA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 283014 16 + 643850 AATTATTAAAGCAGTA i dasNov3.JH563638 I 1561 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3931945 327 - 30143674 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=1384154.000000 s hg38.chr19_GL383574v1_alt 36064 113 + 155864 TAGCAGCATGATGAAGTTTAAA-ATGTAGAGGACAACCACCCCTAGTTTCC--CCATTCTCCCC-AACTACTTTTGTCATTCTCTGTATTCTCTTGTAGGCTGTATTTGTAGGTGTG s panTro5.chr19 36104681 113 + 61309027 TAGCAGCATGATGAAGTTTAAA-ATGTAGAGGACAACCACCCCTAGTTTCC--CCATTTTCCCC-AACTACTTTTGTCATTCTCTGTATTCTCTTGTAGGCTGTATTTGTAGGTGTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39850737 113 + 64411610 TAGCAGCATGATGAAGTTTAAA-ATGTAGAGGACAACCACCCCTAGTTTCC--CCATTTTCCCC-AACTACTTTTGTCATTCTCTGTATTCTCTTGTAGGCTGTATTTGTAGGTGTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6268480 113 - 8369475 TAGCAGCATGATGAAGTTTAAA-ATGTAGAGGACAACCACCCCTAGTTTCC--CCATTCTCCCC-AACTACTTTTGTCATTCTCTGTATTCTCTTGTAGGCTGTATTTGTAGGTGTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63863206 113 - 106955855 TAGCAACATGATGAAGTTTAAA-ATGTAGAGGACAACCACCCCTAGTTTCC--CCATTCTCCCC-AACTACTTTTGTCATTCTCTGTGTTCTCTTGTAAGCTGTATTTGTAGATGTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30171726 113 + 53671032 TAGCAACATGATGAAGTTTAAA-ATGTAGAGGACAACCGCCCCTAGTTTCC--CCATTCTCCCC-AACTACTTTTGTCATTTTCTGTATTCTCTTGTAGGCTGTATTTGTAGGTGTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34624602 113 + 59248254 TAGCAACATGATGAAGTTTAAA-ATGTAGAGGACAACCGCCCCTAGTTTCC--CCATTCTCCCC-AACTACTTTTGTCATTTTCTGTATTCTCTTGTAGGCTGTATTTGTAGGTGTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4492385 113 - 13342542 TAGCAACATGATGAAGTTTAAA-ATGTAGAGGACAACCGCCCCTAGTTTCC--CCATTCTCCCC-AACTACTTTTGTCATTTTCTGTATTCTCTTGTAGGCTGTATTTGTAGGTGTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5423192 113 + 7714307 TAGCAACATGATGAAGTTTAAA-ATGTAGAGGACAACCGCCCCTAGTTTCC--CCATTCTCCCC-AACTACTTTTGTCATTTTCTGTATTCTCTTGTAGGCTGTATTTGTAGGTGTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29230427 113 + 50890351 TAGCAACATGATGAAGTTTAAA-ATGTAGAGGACGACTGCCCCTAGTTTCC--CCATTCTCCCC-AACTACTTTTGTCATTTTCTGTATTCTCTTGTAGGCTGTATTTGTAGGTGTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 854012 113 - 2385121 TAGCAACATGATGAAGTTTAAA-ATGTAGAGGACAACCGCCCCTAGTTTCC--CCATTCTCCCC-AACTACTTTTGTCATTTTCTGTATTCTCTTGTAGGCTGTATTTGTAGGTGTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2289920 113 + 4274983 TAGCAACATGATGAAGTTTAAA-ATGTAGAGAACAACCGCCCCTAGTTTCC--CCATTCTCCCC-AACTACTTTTGTCATTTTCTGTATTCTCTTTTAGGCTGTATTTGTAGGTGTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28523078 111 + 49145316 TAGCAACATGAT---GTTTAAA-ATGTAGAGGACAACCACACCTAGTTTCC--CCATTCTCCCCAAACTACTTTTATTATTGTCTGTATTCTCTTGTAGGCTGTATTTGTAGGTGTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5366513 97 + 8899380 TAGCAACATGAT------------------GAACAGCCACACCTAGTTTCC--CCATTCTCTCCAAACTACTTTTATTATTTTCTGTATTCTCTTGTAGGCTGTATTTGTAGGTGTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1577566 115 - 2680843 TAGCAACATGATGAAGTTTAAA-ATGTAGAGGACAACCACACCTAGTTTCCAACCATTCTCCCCAAACTACGTTTATTATTTTCTGTATTCTCTTGTA-ACTGTATTTGTAGGTGTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 329242 114 - 4471408 TAGCAACATGATGAAATTTAAA-ATGTAGAGGACAACCACACCTAGTTTCC--CCATTCTCCCCAAACTACTTTTATTATTTTCTGTATTCTCTTGTAGGCTGTATTTGTAGGTATG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3932272 111 - 30143674 TAGCAACATGATGAAGTTTAGA-A--TAGAGGACAACCATCCCTAGTTTCA--CCATTCTTCCC-AACTACTGTTTTCATTTTGTATAGTCTCTTGTAGGCTATATTTATAGGTGTG i micMur3.chr22 I 327 I 801 s canFam3.chr1 4578404 109 - 122678785 TAGCAACATGATGAAGTTTGGA-ATAGAGAGAACAGCCAC-TCTAG-CCCA--ACATCTAGCCC-AACTGTTATTATCATTT--TGTGTTCTCTTCGAGGCTATATTTGTGAGTAGG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 283030 111 + 643850 TAGCAACTTGATGAAGTTTACACATATAAAAGACAATTACCCCTAATTTCA--CCGTTCTAACC-CAC--CTATTACCTTTTTGTGTATTCTCTTCCAGGCTTT-TTTGTAGCTGTC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=36889.000000 s hg38.chr19_GL383574v1_alt 36177 4 + 155864 TGCG s panTro5.chr19 36104794 4 + 61309027 TGTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39850850 4 + 64411610 TGTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6268593 4 - 8369475 TGTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63863319 4 - 106955855 TGTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30171839 4 + 53671032 CGTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34624715 4 + 59248254 CGTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4492498 4 - 13342542 CGTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5423305 4 + 7714307 CGTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29230540 4 + 50890351 CGTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 854125 4 - 2385121 CGTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2290033 4 + 4274983 CGTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28523189 4 + 49145316 CATG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5366610 4 + 8899380 CGTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1577681 4 - 2680843 CGTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 329356 4 - 4471408 CCTG i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 283141 4 + 643850 TGTG i dasNov3.JH563638 C 0 I 613 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3932383 801 - 30143674 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4578513 0 - 122678785 C a score=4067557.000000 s hg38.chr19_GL383574v1_alt 36181 400 + 155864 CACATGTGTGtttgaagttgaaaattcacattacatgcaattaaccattatattgt-gtacaattcagtggcacttagtgtagtcacagtgttgtgcaactaccacctctccttagtttcaaaa-ctttccatcatcctac-----taaaatacccctaggcattaagtaatccctcttcatttcccccataccctgttgaccac-taacct--------gctttctgtctccatggtttttcctatttcggatatattatgtaaaaggaatcatacactgtgtgacgttttgtgtctagcttcttttactcagcataatgctttcacgcttcactcttgatgtaacatgtatcagcattgtggt-ttttttatggctgaataatatttcat-----tacatgtatttttaaatatatatat s panTro5.chr19 36104798 400 + 61309027 CACATGTGTGtttgaagttgaaaattcacataacatgcaattaaccattatattgt-gtacaattcagtggcacttagtgtagtcacagtgttgtgcaactaccacctctccttagtttcaaaa-ctttccatcatcctac-----taaaatacccctaggcattaagtaatccctcttcatttcccccataccctgttgaccac-taacct--------gctttttgtctccatggtttttcctatttcggatatattatgtaaaaggaatcatacactgtgtgacgttttgtgtctagcttcttttactcagcataatgctttcacgcttcactcttgatgtaacatgtatcagcattgtggt-ttttttatggctgaataatatttcat-----tacatgtatttttaaatatatatat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39850854 400 + 64411610 CACATGTGTGtttgaagttgaaaattcacataacatgcagttaaccattatattgt-gtacaattcagtggcacttagtgtagtcacagtgttgtgcaactaccacctctccttagtttcaaaa-ctttccatcatcctac-----taaaatacccctaggcattaagtaatccctcttcatttcccccataccctgttgaccac-taacct--------gctttttgtctccatggtttttcctatttcggatatattatgtaaaaggaatcatacactgtgtgacgttttgtgtctagcttcttttactcagcataatgctttcacgcttcactcttgatgtaacatgtatcagcattgtggt-ttttttatggctgaataatatttcat-----tacatgtatttttaaatatatatat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6268597 400 - 8369475 CACATGTGTGtttgaagttgaaaattcacataacatgcaattaaccattatattgt-gtacaattcagtggcacttagtgtagtcacagtgttgtgcaactaccacctctccttagtttcaaaa-ctttccatcatcctac-----taaaatacccctaggcatcaagtaatccctcttcatttcccccataccctgttgaccac-taacct--------gctttctgtctccatggtttttcctatttcggatatattatgtaaaaggaatcatacactgtgtgacgttttgtgtctagcttcttttactcagcataatgctttcacgcttcactcttgatgtaacatgtatcagcattgtggt-tttattatggctgaataatatttcat-----tacatgtatttttaaatatatatat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63863323 392 - 106955855 CACATGTGTGtttgaagttgaaaattcacataacatgcaattaaccagtataaagt-gtacaattcagtggcacttagtgtagtcacagtgttgtgcaactactacctctccttagtttcaaaa-ctttccatcatcctac-----taaaatacccctaggcattaaataatccctcttcatttcccccacaccctgttaaccac-taacct--------gctttctgtcttcatggtttttcctatttcggatatattatgtaaaaggagtcatacactgtgtgacattttgcgtctagcttcttttactcagcataatgctttcacgcttcactcttgatgtaacgtat---agcattgtggt-ttttttatggctgaataat-----at-----tacatgtattttaaaatatgtataa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30171843 404 + 53671032 CTCATGTATGTttgaagttg-aaattcacataacatgcaattaaccattataaagt-gtacaattcagtggcacttagtgtagtcacagtgttgtgcagctaccacctctccttggtttcaaaa-cttttcataatcctactaaaataaaatatccctaggcattaagtaatccctccttatttcccccataccctgttaaccac-taacct--------gctttctgtcttcatggcttttcctatttagggtatattatgtaaaaggaatcatacactgtgtgacgttttgtatctagcttcttttactcagcataatgctttcacgcttcactcttgatgtaacaagtatcagcattgtggg-ttttttatggctgaataatatttcat-----tacatgtattttaaaatatatataa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34624719 404 + 59248254 CTCATGTATGTttgaagttg-aaattcacataacatgcaattaaccattataaagt-gtacaattcagtggcacttagtgtagtcacagtgttgtgcaactaccacctctccttggtttcaaaa-cttttcataatcctactaaaataaaatatccctaggcattaagtaatccctccttatttcccccataccctgttaaccac-taacct--------gctttctgtcttcatggcttttcctatttagggtatattatgtaaaaggaatcatacactgtgtgacgttttgtatctagcttcttttactcagcataatgctttcacgcttcactcttgatgtaacaagtatcagcattgtggg-ttttttatggctgaataatatttcat-----tacatgtattttaaaatatatataa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4492502 404 - 13342542 CTCATGTATGTttgaagttg-aaattcacataacatgcaattaaccattataaagt-gtacaattcagtggcacttagtgtagtcacagtgttgtgcaactaccacctctccttggtttcaaaa-cttttcataatcctactaaaataaaatatccctaggcattaagtaatccctccttatttccctcataccctgttaaccac-taacct--------gctttctgtcttcatggcttttcctatttagggtatattatgtaaaaggaatcatacactgtgtgacgttttgtatctagcttcttttactcagcataatgctttcacgcttcactcttggtgtaacaagtatcagcattgtggg-ttttttatggctgaataatatttcat-----tacatgtattttaaaatatatataa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5423309 404 + 7714307 CTCATGTATGTttgaagttg-aaattcacgtaacatgcaattaaccattataaagt-gtacaattcagtggcacttagtgtagtcacagtgttgtgcaactaccacctctccttggtttcaaaa-cttttcataatcctactaaaataaaatatccctaggcattaagtaatccctccttatttcccccataccctgttaaccac-taacct--------gctttctgtcttcatggcttttcctatttagggtatattatgtaaaaggaatcatacactgtgtgacgttttgtatctagcttcttttactcagcataatgctttcacgcttcactcttgatgtaacaagtatcagcattgtggg-ttttttatggctgaataatatttcat-----tacatgtattttaaaatatatataa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29230544 404 + 50890351 CTCGTGTATGTttgaagttg-aaattcacataacatgcaattaaccatcatgaagc-gtacaattcagtggcacttagtgtagtcacagtgttgtgcaactaccacctctccttggtttcaaaa-cttttcataatcctactaaaataaaatatccctaggcattaagtaatccctccttatttcccccataccctgttaaccac-taacct--------gctttctgtcttcatgacttttcctatttagggtatattatgtaaaaggaatcatacactgtgtgacgttttgtatctagcttcttttactcagcataatgctttcacgcttcactcttgatgtaacaagtatcagcattttggg-ttttttatggctgaataatatttcat-----tacatgtattttaaaatatatataa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 854129 404 - 2385121 CTCATGTATGTttgaagttg-aaattcacgtaacatgcaattaaccattataaagt-gtacaattcagtggcacttagtgtagtcacagtgttgtgcaactaccacctctccttggtttcaaaa-cttttcataatcctactaaaataaaatatccctaggcattaagtaatccctccttatttcccccataccctgttaatcac-taacct--------gctttctgtcttcatggcttttcctatttagggtatattatgtaaaaggaatcatacactgtgtgacgttttgtatctagcttcttttactcagcataatgctttcacgcttcactcttgatgtaacaagtatcagcattgtggg-ttttttatggctgaataatatttcat-----tacatgtattttaaaatatatataa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2290037 401 + 4274983 CACATGTATGTttgaagttg-aaattcacataacatgcaattaaccattataaagt-atacagttcagtggcacttagtgtagtcacagtgttgtgcaactaccacctctccttggtttcaaaa-cttttcataatcctactaaaataaaatatccctaggcattaagtaatccctccttatttccccgataccctgttaaccac-taacct--------gcgttctgtcttcatggcttttcctatttaggatatattatgtaaaaggaatcatacactgtatgacgttttgtatctagcttcttttactcagcataatgctttcacacttcactcttgatgtagcaagtatcaacattgtggg-ttttttatggctg---aatattttat-----tacttgtattttaaaatatatataa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28523193 398 + 49145316 CACATATGTGTttgaagttg-aaattcacataacatgcaattaaccattatacagt-gtacagttcagtggcacttagtgtagtcacagtgttgtgcagctaccacctctccttagtttcaaaa-cttttcgtcatcctag-----taaaacacccctagacattaagtaatccctcctcgtatcccctataccctgttaaccac-taacct--------gctttccgtcttcatggcttttcctgtttcagatttgttatgtaaaaggaatcatacactgtgtgatgttttgtgtctaacttcttttactcagcataatgctttcatgcttcactcttaatgtaacatgtattagcattttg-t-ttttttatggctgaataatatttcat-----tacatatatttttaaatatatatat i calJac3.chr22 C 0 I 2 s saiBol1.JH378197 5366614 377 + 8899380 CACATATGTGTttgaagttg-aaattcacataatatgcgattaaccattataaagt-gtacagttcagtgacac--agtgtagtcacagtgttgtgcagctgccacctctccttagtttcaaaa-ctttttaacatcctag-----taaaacacccctaggcattaagtaatccctcctcatatcccctatacgctatt-accac-taatct--------gctttctgtcttcatggcttttcctgtttcggatatgctatgtgaaaggaatcatacactg----------tgtgtctaacttcttttactcagcataatgctttcatgcttcactctttatgtaacatgtattagca--------ttttttatggttgaataatatttcat-----tatatatatttttaa--atatataa i saiBol1.JH378197 C 0 I 2 s cebCap1.NW_016107633v1 1577685 406 - 2680843 CACATATGTGTttgaagttg-aaattcacataacatgcaattaaccattataaagt-gtacagttcagtgacacttagtgtagtcacagtgttgtgcagctaccacgtctccttagtttcaaaa-cttttcatcatcctag-----taaaacacccctaggcagtaagtaatccctcctcatatcccctataccctgttaaccac-taatctgctttctggctttctgtcttcatggcttttcctgtttcggatatgttatgtgaaaggaatcatacactgtgtgacgttttgtgtctaacttcttttactcagcataatgctttcatgcttcactcttaatgtaacatgtattagcattttg-t-gtttttatggctgaataatatttcat-----tACatatatatatatatatatatat i cebCap1.NW_016107633v1 C 0 I 534 s aotNan1.NW_018505377v1 329360 397 - 4471408 CACATATGTGTttgaagttg-aaattcacataacatgcagttaaccattatgaagt-gtacagttcagtggtacttagtgtagtcacagtgttgtgcagctaccacctctccttagtttcagaa-cttttcatcatcctag-----taaaacacccctaggcattaagtaatccctcctcgtatcccctataccgtattaaccac-taatct--------gctttctgtcttcatggcttttcctgtttcggatatgttatgtaaaaggaatcatacactgtgtgacgttttgtgtctaacttcttttactcagggtaatgctttcatgcttcactcttaatgtaacatgtattagcattttg---ttttttatggctgaataatatttcac-----tacatatatttttaaatatatatat i aotNan1.NW_018505377v1 C 0 I 2 s canFam3.chr1 4578513 373 - 122678785 ---GGGAGATTattgaggtg-aaattcatgtaaca--caattaactattataaagtaatatgattca-tgggatttagtctagtcacagtattgtgcaaccaccacctcacttcagtttcaaaattttttcatcactttag-----aagaatactcctacccattaagtaatccttccccatttccctt-tcccccagtaacaacttaatct--------gttttctgtctctatggcttttcttattttagatatac-----------gatcgtataatgtatgac---------ctgg---cttttacttagcataatgcttcagagtttctttctagttgtaacatgtatcagcatttcattcctttttatggctggatgatactctgtgtgtgtatgtgtgtgtctaaatata----- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3932383 801 - 30143674 I e dasNov3.JH563638 283145 613 + 643850 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=11758.000000 s hg38.chr19_GL383574v1_alt 36581 5 + 155864 catat s panTro5.chr19 36105198 5 + 61309027 catat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39851254 5 + 64411610 catat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6268997 5 - 8369475 cacat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63863715 5 - 106955855 catat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30172247 5 + 53671032 catac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34625123 5 + 59248254 catac i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4492906 5 - 13342542 catac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5423713 5 + 7714307 catac i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29230948 5 + 50890351 catac i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 854533 5 - 2385121 catac i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2290438 5 + 4274983 catac i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28523593 3 + 49145316 cat-- i calJac3.chr22 I 2 C 0 s saiBol1.JH378197 5366993 3 + 8899380 cat-- i saiBol1.JH378197 I 2 C 0 s aotNan1.NW_018505377v1 329759 3 - 4471408 cat-- i aotNan1.NW_018505377v1 I 2 C 0 s canFam3.chr1 4578886 2 - 122678785 aa--- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3932383 801 - 30143674 I e dasNov3.JH563638 283145 613 + 643850 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e cebCap1.NW_016107633v1 1578091 534 - 2680843 I a score=226557.000000 s hg38.chr19_GL383574v1_alt 36586 31 + 155864 atataagatatatagagatcataatttgtct s panTro5.chr19 36105203 31 + 61309027 atataagatatatagagatcataatttgtct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39851259 31 + 64411610 atataagatatatagagatcataatttgtct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6269002 31 - 8369475 atataagatatatagagatcataatttgtct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63863720 31 - 106955855 atataagatatataaagatcataatttgtct i nomLeu3.chr10 C 0 I 5 s rheMac8.chr19 30172252 31 + 53671032 atataagatatatagagaacgtaatttgtct i rheMac8.chr19 C 0 I 5 s macFas5.chr19 34625128 31 + 59248254 atataagatatatagagaacgtaatttgtct i macFas5.chr19 C 0 I 5 s macNem1.NW_012011689v1 4492911 31 - 13342542 atataagatatatagagaacgtaatttgtct i macNem1.NW_012011689v1 C 0 I 5 s cerAty1.NW_012005268v1 5423718 31 + 7714307 atataagatatatagagaacgtaatttgtct i cerAty1.NW_012005268v1 C 0 I 5 s chlSab2.chr6 29230953 31 + 50890351 atataagatatatagagaacgtaatttgtct i chlSab2.chr6 C 0 I 5 s manLeu1.NW_012102454v1 854538 31 - 2385121 atataagatatatagagaacgtaatttgtct i manLeu1.NW_012102454v1 C 0 I 5 s colAng1.NW_012111697v1 2290443 31 + 4274983 atataagttatatagagaatgtaatttgtct i colAng1.NW_012111697v1 C 0 I 5 s calJac3.chr22 28523596 23 + 49145316 ------gatacatagagatcacaatttgt-- i calJac3.chr22 C 0 I 3 s saiBol1.JH378197 5366996 23 + 8899380 ------gatatctagagatcgcagttagt-- i saiBol1.JH378197 C 0 I 3 s cebCap1.NW_016107633v1 1578625 29 - 2680843 acatatGAtgtatagagatcacaatttgt-- i cebCap1.NW_016107633v1 I 534 I 3 s aotNan1.NW_018505377v1 329762 27 - 4471408 --atatgatatatagagatcacaatttgt-- i aotNan1.NW_018505377v1 C 0 I 3 s canFam3.chr1 4578888 22 - 122678785 aaacaatttgtata------ccaattca--- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3932383 801 - 30143674 I e dasNov3.JH563638 283145 613 + 643850 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=1106699.000000 s hg38.chr19_GL383574v1_alt 36617 92 + 155864 tttgttgatgggcatttgggttgtttctacc-atttggctgttttgaataatgctgatataaacatttgtatacaagtttctgtgtgaacaTA s panTro5.chr19 36105234 92 + 61309027 tttgttgatgggcatttgggttgttcctacc-atttggctgttttgaataatgctgatataaacatttgtatacaagtttctgtgtgaacaTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39851290 92 + 64411610 tttgttgatgggcatttgggttgttcctacc-atttggctgttttgaataatgctgatataaacatttgtatacaagtttctgtgtgaaCATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6269033 92 - 8369475 tttgttgatgggcatttgggttgtttctacc-atttggctgttttgaataatgctgatataaacatttgtatacaagtttctgtgtgaaCATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63863756 92 - 106955855 tttgttgatgggcatttgggttgtttctacc-atttggctgttatgaataatgctgatataaacatttgtatacaagtttctgtgtgaaCATA i nomLeu3.chr10 I 5 C 0 s rheMac8.chr19 30172288 92 + 53671032 tttgttgatgggtatttgggttgtttctacc-atttggctgttatgaataatgctgatataaacatttgtatacaagtttctgtgtggacaTA i rheMac8.chr19 I 5 C 0 s macFas5.chr19 34625164 92 + 59248254 tttgttgatgggtatttgggttgtttctacc-atttggctgttatgaataatgctgatataaacatttgtatacaagtttctgtgtgGACATA i macFas5.chr19 I 5 C 0 s macNem1.NW_012011689v1 4492947 92 - 13342542 tttgttgatgggtatttgggttgtttctacc-atttggctgttatgaataatgctgatataaacatttgtatacaagtttctgtgtagacata i macNem1.NW_012011689v1 I 5 C 0 s cerAty1.NW_012005268v1 5423754 92 + 7714307 tttgttgatgggtatttgggttgtttctacc-atttggctgttatgaataatgctgatataaacatttgtatacaagtttctgtgtggacaTA i cerAty1.NW_012005268v1 I 5 C 0 s chlSab2.chr6 29230989 92 + 50890351 tttgttgatgggtatttgggttgtttctacc-atttggctgttatgaataatgctgatataaacatttgtatacaagtttctgtgtggacaTA i chlSab2.chr6 I 5 C 0 s manLeu1.NW_012102454v1 854574 92 - 2385121 tttgttgatgggtatttgggttgtttctacc-atttggctgttatgaataatgctgatataaacatttgtatacaagtttctgtgtgGACATA i manLeu1.NW_012102454v1 I 5 C 0 s colAng1.NW_012111697v1 2290479 92 + 4274983 tttgttgatgggtatttgggttgtttctacc-atttggctgttatgaataatgctgatataaacatttgtatacaagtttctgtgtgGACATA i colAng1.NW_012111697v1 I 5 C 0 s calJac3.chr22 28523622 89 + 49145316 tttgttggtgggcatttgggttgttttcatt-atttggctgttatgaataatgctgatataaacatttgtgtacaagtttctgaatgggc--- i calJac3.chr22 I 3 C 0 s saiBol1.JH378197 5367022 89 + 8899380 tttgttggtgggcatttgggttgttttcacc-gtttggctgttatgaataatgctgacataaacatttgtatacaagtttctgtgtggac--- i saiBol1.JH378197 I 3 C 0 s cebCap1.NW_016107633v1 1578657 89 - 2680843 tttgttggtgggcatttgggttgttttcacc-atttggctgttatgaataatactgatataaacatttgtatacaagtttctgtgtggac--- i cebCap1.NW_016107633v1 I 3 C 0 s aotNan1.NW_018505377v1 329792 89 - 4471408 tttgttagtgggcatttgggttgttttcacc-atttgactgttatgaataatgctgatataaacatttgtatacaagtttctgtgtgGAC--- i aotNan1.NW_018505377v1 I 3 C 0 s micMur3.chr22 3933184 85 - 30143674 tttgttgatgggcatttgggttatttccacctttttggctattatgaataatgctgctgtaaacatttgtgcacaggtttct--------atA i micMur3.chr22 I 801 C 0 s canFam3.chr1 4578910 91 - 122678785 tctgttggtgggca-ttgggttgttttcacc-tttgggctcttatgaataatactgctttaaacattcatgtacaagtttctgtgtggacata i canFam3.chr1 C 0 I 6322 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e dasNov3.JH563638 283145 613 + 643850 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I a score=482135.000000 s hg38.chr19_GL383574v1_alt 36709 47 + 155864 ATATaatctctggtactttgttttggcagccctagcaaact-----aTATTG s panTro5.chr19 36105326 47 + 61309027 ATATaatctctggtactttgttttggcagccctagcaaact-----aTATTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39851382 47 + 64411610 ATATaatctctggtactttgttttggcagccctagcaaact-----aTATTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6269125 47 - 8369475 ATATaatctctggtactttgttttggcagccctagcaaact-----aTATTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63863848 47 - 106955855 ATATaatctctggtactttgttttggcagccccagcaaact-----aTATTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30172380 47 + 53671032 ATATaatctctggtactttgttttggcagccctagcaaact-----aTATTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34625256 47 + 59248254 ATATaatctctggtactttgttttggcagccctagcaaact-----aTATTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4493039 47 - 13342542 atATaatctctggtactttgttttggcagccctagcaaact-----aTATTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5423846 47 + 7714307 ATATaatctctggtactttgttttggcagccctagcaaact-----aTATTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29231081 47 + 50890351 GTATaatctctggtactttgttttggcagccctagcaaact-----aTATTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 854666 47 - 2385121 ATATaatctctggtactttgttttggcagccctagcaaact-----aTATTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2290571 47 + 4274983 ATATaatctctggttctttgttttggcagccctagcaaact-----aTATTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28523711 46 + 49145316 --ataatctctggtactttATTTGTGCAGCACTAGCAAACCG----ATGTTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5367111 46 + 8899380 --ataatctctggtactttatttgggcaGTGCTGGCAAACCA----ATGTTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1578746 46 - 2680843 --ataatctctggtactttatttgggCAGCACTAGCAAACCA----ATGTTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 329881 46 - 4471408 --ATAATCTCTGGTACTTTATTCGGGCAGCGCTAGCAAACCA----ATGTTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3933269 51 - 30143674 ATAcagtctgtgatacttt-ttttggcagccctagcaaactaatacaTACTG i micMur3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e dasNov3.JH563638 283145 613 + 643850 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4579001 6322 - 122678785 I a score=2177208.000000 s hg38.chr19_GL383574v1_alt 36756 186 + 155864 TGTGCTTTATTTCCAGTGTAGTGCTTAGCCCACTTGCTGGACTG-TAACTTCCCTGAGGGTGGGGACATAAATATAATGCCTGCCTAATATTACTTAA--ATATTCTAAGCCTGCTGAATCACTACATTTTCGTTAATTCATGATAATCCCCAAAATATCCCAGAATCAGATCAGTATCTATTCAGCTA s panTro5.chr19 36105373 186 + 61309027 TGTGCTTTCTTTCCAGTGTAGTGCTTAGCACACTTGCCGGACTA-TAACTTCCCTGAGGGTGGGGACATAAATATAATGCCTGCCTAATATTACTTAA--ATATTCTAAGCCTGCTGAATTACTACATTTTCGTTAATTCATGATAATCCCCAAAATATCCCAGAATCAGATCAGTATCTATTCAGCTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39851429 186 + 64411610 TGTGCTTTCTTTCCAGTGTAGTGCTTAGCACACTTGCCGGACTA-TAACTTCCCTGAGGGTGGGGACATAAATATAATGCCTGCCTAATATTACTTAA--ATATTCTAAGCCTGCTGAATTACTACATTTTCGTTAATTCATGATAATCCCCAAAATATCCCAGAATCAGATCAGTATCTATTCAGCTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6269172 186 - 8369475 TGTACTTTCTTTCCAGTGTAGTGCTTAGCACACTTGCCGGACTG-TAACTTCCCTGAGGGTGGGGACATAAATATAATGCCTGCCTAATATTACTTAA--ATATTCTAAGCCTGCTGAATTACTACATTTTCGTTAATTCATGATAATCCCCAAAATATCCCAGAATCAGATCAGTATCTATTCAGCTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63863895 183 - 106955855 TGTGCTTTCTTTCCAGTGTAGTGCTTAGCACACTTCCCGGACTG-TAACTTCCCTGAGGGTGGGGACATAAATATAATGCCTGCCTAATATTACTTAA--ATATTCTAAGCCTGCTGAATTATTACATTTTCGTTAATTC---ATAATCCCCAAAATATCCCAGAATCAGATCAGTATCTATTCAGCTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30172427 184 + 53671032 TGTGCTTTCTTTCCAGTGTAGTGCTTAGCACACTTGCCAGACTA-TAAGTTCCCTGAGGGTGAGGACATAAATATAATGCCTGCCTAATATTACTTAA--ATATTCTAAGCCTGCTGAATTATT--ATTTTCATTAATTCATGATAATCCCCCAGATATCCCAGAATCAGATCAGTATCTATTCAGCTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34625303 184 + 59248254 TGTGCTTTCTTTCCAGTGTAGTGCTTAGCACACTTGCCAGACTA-TAAGTTCCCTGAGGGTGAGGACATAAATATAATGCCTGCCTAATATTACTTAA--ATATTCTAAGCCTGCTGAATTATT--ATTTTCATTAATTCATGATAATCCCCCAGATATCCCAGAATCAGATCAGTATCTATTCAGCTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4493086 184 - 13342542 TGTGCTTTCTTTCCAGTGTAGTGCTTAGCACACTTGCCAGACTA-TAAGTTCCCTGAGGGTGAGGACATAAATATAATGCCTGCCTAATATTACTTAA--ATATTCTAAGCCTGCTGAATTATT--ATTTTCATTAATTCATGATAATCCCCCAGATATCCCAGAATCAGATCAGTATCTATTCAGCTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5423893 184 + 7714307 TGTGCTTTCTTTCCAGTGTAGTGCTTAGCACACTTGCCAGACTA-TAAGTTCCCTGAGGGTGAGGACATAAATATAATGCCTGCCTAATATTACTTAA--ATATTCTAAGCCTACTGAATTATT--ATTTTCATTAATTCATGATAATCCCCCAAATATCCCAGAATCAGGTCAGTATCTATTCAGCTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29231128 184 + 50890351 TGTGCTTTCTTTCCAGTGTAGTGCTTAGCACACTTGCCAGACTA-TAAGTTCCCTGAGGGTGAGGACATAAATATAATGCCTGCCTAATATTACTTAA--ATATTCTAAGCCTGCTGAATTATT--ATTTTCATTAATTCATGATAATCCCCCAAATATCCCAGAATCAGGTCAGTATCTATTCAGCTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 854713 184 - 2385121 TGTGCTTTCTTTCCAGTGTAGTGCTTAGCACACTTGCCAGACTA-TAAGTTCCCTGAGGGTGAGGACATAAATATAATGCCTGCCTAATATTACTTAA--ATATTCTAAGCCTGCTGAATTATT--ATTTTCATTAATTCATGATAATCCCCCAAATATCCCAGAATCAGGTCAGTATCTATTCAGCTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2290618 184 + 4274983 TGTGCTTTCTTTCCAGTGTAGTGCTTAGCACACTTGCCAGACTA-TAAGTTCCCTGAGGGTGAGGACACAAATATAATGCCTGCCTAATATTACTTAA--ATATTCTAAGCCTGCTGAATTATT--ATTTTCATTAATTCATGATAATCCTCAAAATATCCCAGAATGAGATCAGTATCTATTCAGCTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28523757 186 + 49145316 TGTGCTTTCTTTCCTGTGTAGTACTTAGCACACTTGCGAGACTG-TAAGTTCCCTGAGGGTGGGGACATAAATTTAGTGCCTGCCTCATATTACTTAA--ATGTTCCAAGCCTGCTGAATTATTACATTTTCATTAATTCATGATAATCCCCAAAATATCCCAGAAAATTATCAGTATCTGTTCAGCTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5367157 186 + 8899380 TGTGCTTTCTTTCCTGTGTAGTACTTAGCACACTTGCCAGACTG-TAAGTTCCCTGAGGATGGGGACATAAATTTAGTGCCTGCCTCATATTACTTAA--ATATTCCAAGCCTGCTGAATTATTACATTTTCAATGATTCATGATAATCCCCAAAATATTCCAGAATCAGATCAGTACCTATTCAGCTA i saiBol1.JH378197 C 0 I 4405 s cebCap1.NW_016107633v1 1578792 186 - 2680843 TGTGCTTTCTTTCCTGTATAGTACTTAGCACACTTGCCAGACTA-TAAGTTCCCTGAGGGTGGGGACATAAATTTAATGCCTGCCTCATATTACTTAA--ATATTCCAAGCCTGCTGAATTATTACATTTGTAATAATTCATGATAATCCCCAAAATATCCCAGAATCAGATTAGTATCTATTCAGCTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 329927 168 - 4471408 T-----------------TAGTACTTAGCA-ATTTGccagactg-taagttccctgagggtagggacATAAATTTAGTGCTTGCCTCATATTACTTAA--ATATTCCAAGCCTGCTGAATTACTATATTTTCAATAATTCATGATAATCCCCAAAATATCCCAGAATCAGATCAATATCTATTCAGCTA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3933320 187 - 30143674 TGTGCTTTCTTTCCTGCGTAGTCCTCAGCACACTTGCCAGACTGTTAAGTTCCCTAAGGTTGATGACATTAGTACAGTGCTTGCTTAATATTACTTAG--ATATTCTAAGCCAGCTGAATTGTTACATTTTCATTAATTCATGATAATCTCCCAAATATCATGGAGTCAGATCAGTATCTATTCAGCCA i micMur3.chr22 C 0 C 0 s dasNov3.JH563638 283758 187 + 643850 tgtgttttctttcct-catagtgctcaatacatttgctagactg-taagttatctgagggcaaggacATTAGCACAGTTCCTCCTTAGTATCACTTAAATATATTCTAGGCATGCTGAATTAGTACGTTTTCATTTTTTCTTGATAATCCCCCAAATATCACAGGATCAGATCAGTATCTATTCAACCA i dasNov3.JH563638 I 613 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4579001 6322 - 122678785 I a score=1148167.000000 s hg38.chr19_GL383574v1_alt 36942 121 + 155864 CATAATACTACTTAATAGTAGTAG--T-ATGGCTTACTTTGAAGCCTAATGCTGTGTCAGCTTCAGAGATTAAGAT----GT---CAGGAAACCAATAGTAGTACTTATTAGAGGCATTGCAAGTGGTATT--------- s panTro5.chr19 36105559 121 + 61309027 CATAATACTACTTAATAGTAGTAG--T-ATGTCTTACTTTGAAGCCTAATGCTGTGTCAGCTTCAGAGATTAAGAT----GT---CAGGAAACCAATAGTAGTACTTATTAGAGGCATTGCAAGTGGTATT--------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39851615 121 + 64411610 CATAATACTACTTAATAGTAGTAG--T-ATGTCTTACTTTGAAGCCTAATGCTGTGTCAGCTTCAGAGATTAAGAT----GT---CAGGAAACCAATAGTAGTACTTATTAGAGGCATTGCAAGTGGTATT--------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6269358 123 - 8369475 CATAATACTACTTAGTAGTAGTAGTAT-ATGGCTTACTTTGAAGCCTAATGCTGTGTCAGCTTCAGAGATTAAGAT----GT---CAGGAAACCAATAGTAGTACTTATTAGAGGCATTGCAAGTGGTATT--------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63864078 119 - 106955855 CAT--TTTGACTTAATAGTAATAT--T-ATGGCTTACTTTGAAGCCTAATGCTGTGTCAGCTTCAGAGATTAAAAT----GT---CAGGAAACCAATAGTAATACTTACTAGAGGCATTGCAAGTGGTATT--------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30172611 119 + 53671032 CAT--TTTGACTTAATAGTAGTAG--T-ATGGCTTAATCTGAAGCCTAATGCTGTGTTAGCTTCAGAGATTAGGAT----GT---TGAGAAACCAATAGTAGTACTTATTAGAGGCATTGCAAGTGGTATT--------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34625487 119 + 59248254 CAT--TTTGACTTAATAGTAGTAT--T-ATGGCTTAATCTGAAGCCTAATGCTGTGTTAGCTTCAGAGATTAGGAT----GT---TGAGAAACCAATAGTAGTACTTATTAGAGGCATTGCAAGTGGTATT--------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4493270 119 - 13342542 CAT--TTTGACTTAATAGTAGTAT--T-ATGGCTTAATCTGAAGCCTAATGCTGTGTTAGCTTCAGAGATTAGGAT----GT---TGAGACACCAATAGTAGTACTTATTAGAGGCATTGCAAGTGGTATT--------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5424077 119 + 7714307 CAT--TTTGACTTAATAGTAGTAT--T-ATGGCTTAATCTGAAGCCTAATGCTGTGTTAGCTTCAGAGATTAAGAT----GT---TGGGAAACCAATAGTAGTACTTATTAGAGGCATTGCAAGTGGTATT--------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29231312 119 + 50890351 CAT--TTTGACTTAATAGTAGTAT--T-ATGGCTTAATCTGAAGCCTAATGCTGTGTTAGCTTCAGAGATTAGGAT----GT---TGGGAAACCAATAGTAGTACTTATTAGAGGCATTGCAAGTGGTATT--------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 854897 119 - 2385121 CAT--TTTGACTTAATAGTAGTAT--T-ATGGCTTAATCTGAAGCCTAATGCTGTGTTAGCTTCAGAGATTAGGAT----GT---TGGGAAACCAATAGTAGTACTTATTAGAGGCATTGCAAGTAGTATC--------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2290802 119 + 4274983 CAC--TTTGACTTAATAGTAGTAT--T-ATGGCTTAATCTGAAGCCTAATGCTGTGTTAGCTTCAGAGATTAGGAT----GT---TGGGAAACCAGTAGTAGTACTTATTAGAGGCATTGCAAGTGGTATT--------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28523943 106 + 49145316 CAT--TTTGACTTAATAGTAGTAT--T-ATGGCTTAATTTGAAGCCTAATGTTGTGTCAGCTTCAGGGATTAGGAA----GT----GAGGAACCA------------ACTAGAGGCATTACAAGTGGTATT--------- i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1578978 118 - 2680843 CAT--TTTGACTTAATAGTAGTAT--T-ATGACTTAATTTGAAGCCTAATGCTGTGTCAGCTTCAGGGATTAGGAA----GT----GAGGAACCAATAGTAGTACTTATTAGAGGCATTACAAGTGGTATT--------- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 330095 118 - 4471408 CAT--TTTGACTTAATAGTAGTAT--T-ATGGCTTAATTTGAAGCCTAATGCTGTGTCAGCTTCAGGGATTAGGAA----GT----GAGGAATCGATAGTAGTACTTATTAGAGGCATTACAAGTGGTATT--------- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3933507 122 - 30143674 CAG--TCTAACTTAATAGTAGCAT--T-AAGGCTTAATTTGAAGTCTAATGCTATGTCAGCTTCAAAGATTATGAT----GTGTTGAAGAAACCAATGGTAGTACTTTTTAGAGACATTATAAGTGATATT--------- i micMur3.chr22 C 0 I 1046 s dasNov3.JH563638 283945 133 + 643850 CAT--TCTGACTTGATAGTAGAAT--TAAAAGCTTAATTTGAAGGCTAATGCTGTGCCAGTTTAGTGGATTAGGATTAAGTT---GAGGAAACTGATGGTGGTCCTTATTAGAGGCGTTTGAGGTTGCATTACAGATTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4579001 6322 - 122678785 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=5296345.000000 s hg38.chr19_GL383574v1_alt 37063 578 + 155864 TAGTGTTTAGTGGACCTTCAAATCCAATTCAGTGATATCAAATCCAAGTAAGCAAAT-AGAC-tgagctccttgagaataggaactggtttccctagcatctagcatagtacctgg--gacaggtggtgcccagcaagtatttgAAAGAAATG-GGATGAAATGCAAT-GACATACGGCACCTATGTTCAGCTTAAAACTCCAGTCACATTACCTATGGG-----T-ATTTACATTGGAATGTGT----------AGTTGCTGTAGAATCCCAAAATGAA-TACTAGAATAACAATG-TTC----------------TTTCTCAAAGTACTACGTGTTATGAATG---AAAAAAAAAAT---GATTAGAACATAGTT-----------------------------------------------------------------------CAGATTTTGCCAGCCAGACAAAGGCATTTGTGCTGTAATCTGAGGTATGCCTTCCTgcactaagaggaacagggtttatgggaaaactaggattagg-agcagaccatttgaaatctgtgcatctttgtaatttaagcactaatgtaaacctaataaaaagatagtagtgtgcttaaaGATAAGTTAAAATTTTTAAAC--AAATAATTTGGTAAATTTAGAACTTTCCCTTTAAAAACAGTAAAGGTGA s panTro5.chr19 36105680 580 + 61309027 GAGTGTTTAGTGGACCTTCAAATCCAATTCAGTGACATCAAATCCAAGTAAGCAAAT-AGAC-tgagctccttgagaataggaactggtttccctagcatctagcatagtacctgg--gacaggtggtgcccagcaagtatttgAAAGAAATG-GGATGAAATGCAAT-GACATACGGCACCTATGTTCAGCTTAAAACTCCAGTCACATTACCTATGGG-----T-ATTTACATTGGAATGTGT----------AGTTGCTGTAGAATCCCAAAATGAA-TACTAGAATAACAATG-TTC----------------TTTCTCAAAGTACTACGTGTTATGAATG-AAAAAAAAAAAAT---GATTAGAACATAGTT-----------------------------------------------------------------------CAGATTTTGCCAGCCAGACAAAGGCATTTGTGCTGTAATCTGAGGTATGCCTTCCTgcactaagaggaacagggtttatgggaaaactaggattagg-agcagaccatttgaaatctgtgcatctttgtaatttaagcactaatgtaaacctaataaaaagatagtagtgtgcttaaaGATAAGTTAAAATTTTTAAAC--AAATAATTTGGTAAATTTAGAACTTTCCCTTTAAAAACAGTAAAGGTGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39851736 578 + 64411610 GAGTGTTTAGTGGACCTTCAAATCCAATTCAGTGACATCAAATCCAAGTAAGCAAAt-agac-tgagctccttgagaataggaactggtttccctagcatctagcatagtacctgg--gacaggtggtgcccagcaagtatttgaaagaaatg-GGATGAAATGCAAT-GACATACGGCACCTATGTTCAGCTTAAAACTCCAGTCACATTACCTATGGG-----T-ATTTACATTGGAATGTGT----------AGTTGCTGTAGAATCCCAAAATGAA-TACTAGAATAACAATG-TTC----------------TTTCTCAAAGTACTACGTGTTATGAATG---AAAAAAAAAAT---GATTAGAACATAGTT-----------------------------------------------------------------------CAGATTTTGCCAGCCAGACAAAGGCATTTGTGCTGTAATCTGAGGTATGCCTTCCTgcactaagaggaacagggtttatgggaaaactaggattagg-agcagaccatttgaaatctgtgcatctttgtaatttaagcactaatgtaaacctaataaaaaGATAGTAGTGTGCTTAAAGATAAGTTAAAATTTTTAAAC--AAataatttggtaaatttagaactttccctttaaaaacagtaaaggtga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6269481 575 - 8369475 GAGTGTTTAGTGGACCTTCAAATCCAATTCAGTGACATCAAATCCAAGTAAGCAAAt-agac-tgagctccttgagaataggaactggtttccctagcatctagcatagtacctgg--gacaggtggtgcccagcaagtatttgaaagaaatg-GGATGAAATGCAAT-GACATACGGCATCTATGTTCAGCTTAAAACTCCAGTCACATTACCTATGGG-----T-ATTTACATTGGAATGTGT----------AGTTGCTGTAGAATCCCAAAATGAA-TACTAGAATAACAATG-TTC----------------TTTCTCAAAGTACTACGTGTTGTGAATG---AAAAAAAAAAT---GATTAGAACATAGTT-----------------------------------------------------------------------CAGATTTTGCCAGCCAGACAAAGGCATTTGTGCTGTAATCTGAGGTATGCCTTCCTgcactaagaggaacagggtttatgggaaaactaggattagg-agcagaccatttgaaatctgtgcatctttgtaatttaagcactaatgtaaacctaataaaaaGA---TAGTGTGCTTAAAGATAAGTTAAAATTTTTAAAC--AAataatttggtaaatttagaactttccctttaaaaacagtaaaggtga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63864197 577 - 106955855 GAGTGTTTAGTGGACCTTCAACTCCAATTCAGTGACATCAAATCCAAGTAAGCAAAt-agac-tgagctccttgagaataggaactggcttccctagcatctagcatagtacctgg--gacaggtggtgcccagcaagtatttgaaagaaatg-GGATGAAATGCAAT-GACGTACAGCACCTATGCTCAGCTTAAAGCTCTAGTCACATTACCTATGGG-----T-ATTTACATTGGAATGTGT----------AGTTGCTGTAGAATCCCAAAATGAA-TACTAAAGTAAAAATG-TTC----------------TTTCTCAAAGTACTACGTGTTATGAAT----AAAAAAAAAAT---GATTAGAACATCGTT-----------------------------------------------------------------------CAGATTTTGCCAGCCAGACAAAGGCATTTGTGCTGTAATCTGAGGTATGCCTTCCTgcactaagaggaacagggtttatgggaaagctagaattagg-agcagaccatttgaaatctgtgcatctttgtaatttaagcactaatgtaaacctaataaaaagatactagtgtgcttaaaGATAAGTTAAAATTTTTAAAC--AAATAATTCGGTAAATTTAGAACTTTCCCTTTAAAAAGAGTAAAGGTGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30172730 580 + 53671032 GAGTGTTTAGTGGACCTTCAAATCCAATTCAGTGACATCACATCCAAGTAAGCAAAT-AGAT-tgagctccttgagaataggaactggtttccctagcatctagcataggacctgg--gacaggtggtgcccagtaagtatttgAAAGAAACG-GGATGAAATGCAAT-GACATACAGCACCTATGTTCAGCTTAAAGCTCTAGTCACATTACCTATGGG-----T-ATTTACATTGGAATGTGT----------AGTTGCTGTAGAATCCCAAAATGAA-TAATAGAGTAAAAATG-TTC----------------TTTCTCAAAGTACTATGTGTTATGAATG---AAAAAAATAATAATAATTAGAACATAATT-----------------------------------------------------------------------CAGATTTTGCCAGCCAGGCAAAGGCATTTGTGCTGTAATCTGAGGTATGCCTtcctgcactaagaggaatggggtttatgggaaaactaggattagg-agcagaccattagaaatctgtgcatctttgtaatttaagcactaatgtaaacctaataaaaa-atactagtgtgcttaaaGATAAGTTAAAATTTTTAAAC--AAATAATTCGGTAAATTTATAACTTTCCCTTTAAAAACAGTAAAGGTAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34625606 580 + 59248254 GAGTGTTTAGTGGACCTTCAAATCCAATTCAGTGACATCACATCCAAGTAAGCAAAT-AGAT-tgagctccttgagaataggaactggtttccctagcatctagcataggacctgg--gacaggtggtgcccagtaagtatttgAAAGAAACG-GGATGAAATGCAAT-GACATACAGCACCTATGTTCAGCTTAAAGCTCTAGTCACATTACCTATGGG-----T-ATTTACATTGGAATGTGT----------AGTTGCTGTAGAATCCCAAAATGAA-TAATAGAGTAAAAATG-TTC----------------TTTCTCAAAGTACTATGTGTTATGAATG---AAAAAAATAATAATAATTAGAACATAATT-----------------------------------------------------------------------CAGATTTTGCCAGCCAGGCAAAGGCATTTGTGCTGTAATCTGAGGTATGCCTTCCTgcactaagaggaatggggtttatgggaaaactaggattagg-agcagaccatttgaaatctgtgcatctttgtaatttaagcactaatgtaaacctaataaaaa-atactagtgtgcttaaaGATAAGTTAAAATTTTTAAAC--AAATAATTCGGTAAATTTATAACTTTCCCTTTAAAAACAGTAAAGGTAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4493389 580 - 13342542 GAGTGTTTAGTGGACCTTCAAATCCAATTCAGTGACATCACATCCAAGTAAGCAAAT-AGAT-tgagctccttgagaataggaactggtttccctagcatctagcataggacctgg--gacaggtggtgcccagtaagtatttgAAAGAAACG-GGATGAAATGCAAT-GACATACAGCACCTATGTTCAGCTTAAAGCTCTAGTCACATTACCTATGGG-----T-ATTTACATTGGAATGTGT----------AGTTGCTGTAGAATCCCAAAATGAA-TAATAGAGTAAAAATG-TTC----------------TTTCTCAAAGTACTATGTGTTATGAATG---AAAAAAATAATAATAATTAGAACATAATT-----------------------------------------------------------------------CAGATTTTGCCAGCCAGGCAAAGGCATTTGTGCTGTAATCTGAGGTATGCCTTCCTgcactaagaggaatggggtttatgggaaaactaggattagg-agcagaccatttgaaatctgtgcatctttgtaatttaagcactaatgtaaacctaataaaaa-ttactagtgtgcttaaaGATAAGTTAAAATTTTTAAAC--AAATAATTCGGTAAATTTATAACTTTCCCTTTAAAAACAGTAAAGGTAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5424196 580 + 7714307 GAGTGTTTAGTGGACCTTCAAATCCAATTCAGTGACGTCACATCCAAGTAAGCAAAT-AGAT-tgagctccttgagaataggaactggtttccctagcatctagcataggacctgg--gacaggtggtgcccagtaagtatttgAAAGAAACG-GGATGAAATGCAAT-GACATACAGCACCTATGTTCAGCTTAAAGCTCTAGTCACATTACCTATGGG-----T-ATTTACATTGGAATGTGT----------AGTTGCTGTAGAATCCCAAAATGAA-TAATAGAGTAAAAATG-TTC----------------TTTCTCAAAGTACTATGTGTTATGAATG---AAAAAAATAATAATAATTAGAACATAATT-----------------------------------------------------------------------CAGATTTTGCCAGCCAGGCAAAGGCATTTGTGCTGTAATCTGAGGTATGCCTTCTTgcagtaagaggaacggggtttatgggaaaactaggattagg-agcagaccatttgaaatctgtgcatctttgtaatttaagcactaatgtaaacctaataaaaa-atactagtgtgcttaaaGATAAGTTAAAATTTTTAAAC--AAATAATTCGGTAAATTTATAACTTTCCCTTTAAAAACAGTAAAGGTAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29231431 580 + 50890351 GAGTGTTTAGTGGACCTTCAAATCCAATTCAGTGACATCACATCCAAGTAAGCAAAT-AGAT-tgagctccttgagaacaggaactggtttccctagcatctagcataggacctgg--gacaggtggtgcccagtaagtgtttgAAAGAAACG-GGATAAAATGCAAT-GACATACAGTACCTATGTTCAGCTTAAAGCTCTAGTCACATTACCTATGGG-----T-ATTTACATTGGAATGTGT----------AGTTGCTGTAGAATCCCAAAATGAA-TAATAGAGTAAAAATG-TTC----------------TTTCTGAAAGTACTACGTGTTATGAATG---AAAAAAATAATAATAATTAGAACATAATT-----------------------------------------------------------------------CAGATTTTGCCAGCCAGGCAAAGGCATTTGTGCTGTAATCTGAGGTATGCCTtcctgcactaagaggaacggggtttatgggaaaactaggattagg-agcagaccatttgaaatctgtgcatctttgtaatttaagcactaatgtaaacctaataaaaa-atactagtgtgcttaaaGATAAGTTAAAATTTTTAAAC--AAATAATTCGGTAAATTTATAACTTTCCCTTTAAAAACAGTAAAGGTAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 855016 580 - 2385121 GAGTGTTTAGTGGACCTTCAAATCCAATTCAGTGACATCACATCCAAGTAAGCAAAT-AGAT-tgagctccttgagaataggaactggtttccctagcatctagcataggacctgg--gacaggtggtgcccagtaagtatttgAAAGAAACG-GGATGAAATGCAAT-GACATACAGCACCTGTGTTCAGCTTAAAGCTCTAGTCACATTACCTATGGG-----T-ATTTACATTGGAATGTGT----------AGTTGCTGTAGAATTCCAAAATGAA-TAATAGAGTAAAAATG-TTC----------------TTTCTCAAAGTACTACGTGTTATGAATG---AAAAAAATAATAACAATTAGAACATAATT-----------------------------------------------------------------------CAGATTTTGCCAGCCAGGCAAAGGCATTTGTGCTGTAATCTGAGGTATGCCTTCTTgcactaagaggaacggggtttatgggaaaactaggattagg-agcagaccatttgaaatctgtgcatctttgtaatttaagcactaatgtaaacctaataaaaa-atactagtgtgcttaaaGATAAGTTAAAATTTTTAAAC--AAATAATTCGGTAAATTTATAACTTTCCCTTTAAAAACAGTAAAGGTAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2290921 580 + 4274983 GAGTGTTTAGTGGACCTTCAAATCCAATTCAGTGACATCACATCCAAGTAAGCAAAT-AGAT-tgagctccttgagaataggaactggtttccctagcatctagcataggacctgg--gacaggtggtgcccagtaagtatttgaaagaaatg-GGATGAAATGCAAT-GACATACAGCACCTATGTTCAGCTTAAAGCTCTAGTCACATTACCTATGGG-----T-ATTTACATTGGAATGTGT----------AGTTACTGTAGAATCCCAAAATGAA-TAATAGAGTAAAAATG-TTC----------------TTTCTCAAAGTACTACGTGTTATGAATG---AAAAAAATAATAATAATTAGAACATAATT-----------------------------------------------------------------------CAGATTTTGCCAGCCAGGCAAAGGCATTTGTACTGTAATCTGAGGTATGCCTTCCTgcactaagaagaacggggtttatgggaaaactaggattagg-agcagaccatttgaagtctgtgcatctttgtaatttaagcactaatgtaaacctaataaaaa-atactagcatgcttaaaGATAAGTTAAAAATTTTAAAC--AAATAATTCGGTAAATTTAGAACTTTCCCTTTAAAAACAGTAAAGGTAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28524049 546 + 49145316 GAGTGTTTAGTGGACCTTCAAATCCAATTCAGTGACATCAAATCCAAGTAAGCAAAt-agac-tgagctccttgagaataggaactggtttccctagcatctagc--------------acaggtggtgcccagtaagtatttgaaagaaatg-TTATGAAATGCAGT-GACATACAGTACTTATTTTCAGCTTAAAGCTCTAGTCACATTACCTACGGT-----TGATTTACATTGGAGTATGT----------AGTTGCTGTAGAATCCCAAAGTGAA-TAATAGAGTAAAAATGTTTC----------------TTTCTCAAAGTACTATGTGTTATGAGGG----GAAAAAAAAT---GATTAGAACATAATC-----------------------------------------------------------------------CAGATTTTGCCAGCTAAGCAAAGGCATCTGTGCTGTAATATGAGGTATGCCTtcatgcactaagaggaacaggattaatgggaaaactaggattagg-agcagaccatttgaaattcgtacatctttgtaatttaagcactaatttaaacctaataaaaa---------ATGCTTAAGG------------TTTTAAAC--AAATAATTCAGCAAATTTAGAACTTTCCCTTTAAAAACAGTAAAGGTGG i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1579096 570 - 2680843 GAGTGTTTAGTGCAACTTCAAATCCAATTCAGTGACATCAAATCCAAGTAAGCAAAt-agac-tgagctccttgagaataggaactggtttccctagcatctagcacagtacctgg--gacaggtggtgcccagtaagtatttgAAAAATATG-TTATGAAATGCAAT-GACATACAATACTTATGTTCAGCTTAAAGCTCTAGTCACATTACCTGTGGT-----TGATTTACATTGGAATGTGT----------AGTTGCTGTAGAATCCCAAAATGAA-TAATAGAGTAAAAATGTTTC----------------TTTCTCAAAGTACTATGTGTTGTGAGTGAAAAAAAAAAAAAT---GACTAGAACATAATC-----------------------------------------------------------------------CAGATTTTACCAGCCAGGCAAAGGCATCTGTGCTGTAATATGAGGTATGCCTTCCTgcagtaagaggaacagggtttctggggaaactaggattagg-agcagaccatttgaaatctgtacatctttgtaatttaagcactaatttaaacctaataaaaa-atgctagcatgcttaaGG------------TTTTAAAC--AAATAATTCAGTAAATTTAGAGCTTTCTCTTTAAAAACAGTAAAGGTGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 330213 568 - 4471408 GAGTGTTTAGTGGACCTTCAAATCCAATTCAGTGACATCAAATCCAAGTAAGCAAATAAGAC-tgagctccttgagaataggaactggtttccctagcatttagcacagtacgtgg--gacaggtggtgcccagtaagtatttgaaaaaaatg-ttatgaaatgcagt-gacatacagtacttatgttcagCTTAAAGCTCTAGTCACATTACATATGGT-----TGATTTACATTGGAATGTGT----------AGTTGCTGTAGAATCCCAAAATGAA-TAATAGAGTAAAAATGTTTC----------------TTTCTCAAAGTACTATGTGTTATGAGTG---AAAAAAAAAAT---GATTAGAACATAATC-----------------------------------------------------------------------CAGATTTTGCCAGCCAGGCAAAGGCATCTGTGCTATAATATAAGGTATGCCTTCCTgcactaagaggaacagggtttatgggaaaactaggattagg-agcagaccatttgaaatctgtacatctttgtaatttaagcactaatttaaacgtaataaaaa-atgctagcatgcttaaGG------------TTTTAAAC--AAATAATTTGGTAAATTTAGAACTTTCCCTTTAAAAACAGTAAAGGTGG i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 284078 658 + 643850 AAATACTGAGTGGACCTTTAA--------------------ATCCGTGTAAGctaat-atacttgagctcctcgagaataagaactgatttccctagcacttaggacagtacctggcatataggtagtacccagtaagtacttCAAAATACTGAAAATGAGGTGCAGCAAAAATATAGCAGTATTGTTCTAATCAGGACTTTTACAAGGTTACCTATTGGGCTTTT-TTTTTTATTGGAATGTGTTTAAAACACCTATTGGTGT----TTTTAAAGTAAGCTAATCAAGTAAAAATG-TTCCTTTCCCCAAAAAGTATTTCCCAAAATACTAAATGTTATAAACAAACAAACAAAAAAGAGACGTAAGAAAATAATTCTGGGATCCTAGGTTAAATTAAATATTTCAATTTTAGTTACTAAGAATGAGTTGATAGGAAAAATTAGTAGCAGATTCTGACGTTCAAGTACAGGCATTTCAGCTATAATATGTTGTATGCCTTCCTGCACTAaggg----------taggggaaaactagagttaggaaacggaccattcagatcctgtttaactttataacttgaacactaataagagcctaataaaaa--taatagcacttttaaagacttgttaaattcctaagacataaatactatagtaaatttaggattttgcctttaaaaa-aataaaggtga i dasNov3.JH563638 C 0 I 34 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3933629 1046 - 30143674 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4579001 6322 - 122678785 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=882021.000000 s hg38.chr19_GL383574v1_alt 37641 109 + 155864 CCAGAAGTGGTGGCACTACTCAGGGCTAGCTGTATTTAACTGTTGTTACCTGCAAATGC-Aaaaactaaataacattttaggaaaaattggaaatgaaccaatgtgattt s panTro5.chr19 36106260 109 + 61309027 CCAGAAGTGGTGGCACTACTCAGGGCTAGCTGTATTTAACTGTTGTTACCTGCAAATGC-Aaaaactaaataacattttaggaaaaattggaaatgaaccaatgtgattt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39852314 109 + 64411610 ccagaagtggtggcactactcagggctagctgtatttaactgttgttacctgcaAATGC-AAAAACTAAAtaacattttaggaaaaattggaaatgaaccaatgtgattt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6270056 109 - 8369475 ccagaagtggtggcactactcagggctagctgtatttaactgttgttacctgcaAATGC-AAAAACTAAAtaacattttaggaaaaattggaaatgaaccaatgtgattt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63864774 109 - 106955855 CCAGAAATGGTGGCACTACTCAGGGCTAGCTGTATTTAACTGTTGTTACCTGCAAATGC-AAAAACTAAAtaacattttaggaaaaattggaaatgaaccaatgtgattt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30173310 109 + 53671032 CCAGAAGTGATGGCACTACTCATGGCTAGGTGTATTTAACTGTTGTTACCTGCAAATGC-Aaaaactaaataacattttaggaaaaactggaaatgaaccaatgtgattt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34626186 109 + 59248254 CCAGAAGTGATGGCACTACTCATGGCTAGGTGTATTTAACTGTTGTTACCTGCAAATGC-AAAAACTAAAtaacattttaggaaaaactggaaatgaaccaatgtgattt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4493969 109 - 13342542 CCAGAAGTGATGGCACTACTCATGGCTAGGTGTATTTAACTGTTGTTACCTGCAAATGC-Aaaaactaaataacattttaggaaaaactggaaatgaaccaatgtgattt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5424776 109 + 7714307 CCAGAAGTGATGGCACTACTCATGGCTAGGTGTATTTAACTGTTGTTACCTGCAAATGC-Aaaaactaaataacattttaggaaaaactggaaatgaaccaatgtgattt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29232011 109 + 50890351 CCAGAAGTGATGGCACTACTCATGGCTAGGTGCATTTAACTGTTGTTACCTGCAAATGC-Aaaaactaaataacactttaggaaaaactggaaatgaaccaatgtgattt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 855596 109 - 2385121 CCAGAAGTGATGGCACTACTCATGGCTAGGTGTATTTAACTGTTGTTACCTGCAAATGC-AAAAACTAAAtaacattttaggaaaaactggaaatgaaccaatgtgattt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2291501 109 + 4274983 CCAGAAGTGATGGCACTACTCATGGCTAGGTGTATTTAACTGTTGTTACCTGCAAATGC-AAAAACTAAAtaacattttaggaaaaactggaaatgaaccaatgtgattt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28524595 100 + 49145316 CCAGGAATGGTAGCACTACTTGTGGCTTGCTGTGTTTAGCTGTTGTTAACTGCAAACGc-aaaaaataaataacatttta---------ggaaatgaaccaatgtgattt i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1579666 76 - 2680843 CCAGGAGTGGTAGCA------------------------CTGTTGTTACCTGCAAACGC-AAAAAATAAATAACATTTTA---------GGAAatgaaccaatgtcattt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 330781 101 - 4471408 CCAGGAGTAGTGGCACTACTTGTGGCTTGCTGTGTTTAGCTGTTGTTACCTGCAAACGCAAAAAAATAAATAACATTTTA---------GGAAataaaccaatgtgattt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3933629 1046 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5442210 331 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4579001 6322 - 122678785 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=1116271.000000 s hg38.chr19_GL383574v1_alt 37750 114 + 155864 ctgaatgtactgacataattcccttatttactgattgcatatgagctaatgtatgtgttgtagtagaatagTTCCAGTAGTTCTTTACCTTTTCTGTGCTTATCATGCCTCCTT s panTro5.chr19 36106369 114 + 61309027 ctgaatgtactgacgtaattcccttatttactgattgcatatgagctaatgtatgtgttgtagtagaatagTTCCAGTAGTTCTTTACCTTTTCTGTGCTTATCATGCCTCCTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39852423 114 + 64411610 ctgaatgtactgacataattcccttatttactgattgcatatgagctaatgtatgtgttgtagtagaatagTTCCAGTAGTTCTTTACCTTTTCTGTGCTTATCATGCCTCCTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6270165 114 - 8369475 ctgaatgtactgacataattcccttatttactgattgcatatgagctaatgtatgtgttgtagtagaatagTTCCAGTAGTTCTTTACCTTTTCTGTGCTTATCATGCCTCCTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63864883 111 - 106955855 ccgaatgtactgacataattcccttatttactgattgcatatgagctaatGTATGTGTT---GTAGAATAGTTCCAGTAGTTCTTTACCTTTTCTGTGCTTATCATGCCTCCTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30173419 114 + 53671032 ctgaatgtactgacataattcccttatttactgattgcatatgagctaatgtatgtgttgtagtagaatagTTCCGGTAGCTCTTTACCTTTTCTATGCTTGTCATGCCTCCTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34626295 114 + 59248254 ctgaatgtactgacataattcccttatttactgattgcatatgagctaatgtatgtgttgtagtagaatagTTCCGGTAGCTCTTTACCTTTTCTATGCTTGTCATGCCTCCTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4494078 114 - 13342542 ctgaatgtactgacataatttccttatttactgattgcatatgagctaatgtatgtgttgtagtagaatagTTCCGGTAGCTCTTTACCTTTTCTATGCTTGTCATGCCTCCTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5424885 114 + 7714307 ctgaatgtactgacataattcccttatttactgattgcatatgagctaatgtatgtgttgtagtagaatagTTCCGGTAGTTCTTTACCTTTTCTATGCTTGTCATGCCTCCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29232120 114 + 50890351 ctgaatgtactgacataattcccttatttactgattgcatatgagctaatgtatatgttgtagtagaatagTTCCAGTAGTTCTTTACCTTTTCTATGCTTGTCATGCCTCCTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 855705 114 - 2385121 ctgaatgtactgacataattcccttatttactgattgcatatgagctaatgtatgtgttgtagtagaatagTTTCGGTAGTTCTTTACCTTTTCTATGCTTGTCATGCCTCCTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2291610 114 + 4274983 ctgaatgtactgacataattcccttatttactgattgcatatgagctaatGTATGTGTTGTACTAGAATAGTTCCGGTAGTTCTTTACCTTTTCTGTGCTTGTCATGCCTCCTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28524695 114 + 49145316 ctgaatgtactgacctaattcccttatttactgattgcatgtgagctaatGTATGTACTGTAGTAGAATAGTTCTGGTAGTCCTCTACCTTTTCTGTGTTTACCATGCCTCCtt i calJac3.chr22 C 0 I 305 s cebCap1.NW_016107633v1 1579742 114 - 2680843 ctgaatgtactgacataattcccttatttaccaattgcatgtgagctaatGTATGTACTGTAGTAGAATGGTTCCAGTAGTTCTCTACCTTTTCTGTGCTTAACATGCCTCCTT i cebCap1.NW_016107633v1 C 0 I 318 s aotNan1.NW_018505377v1 330882 114 - 4471408 ctgaatgtactgacataattcccttatttaccgattgcatgtgagctaatGTATGTACTGTAGTAAAATAGTTCTGGTAGTTCTTTACCTTTTCTGTGCTTACCATGCCTCCTT i aotNan1.NW_018505377v1 C 0 I 314 s otoGar3.GL873654 5442541 109 + 5549422 ctgagTTtactgacataattccctgacttagcagttgcatatgagctgat-tcCATGCTACAGCACAATGGTTCT----GTTCTCTGCCTTCTCTGTACCTGTCATGTCTCTGT i otoGar3.GL873654 I 331 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3933629 1046 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4579001 6322 - 122678785 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=307393.000000 s hg38.chr19_GL383574v1_alt 37864 36 + 155864 CCTTTCTACTGTTAATGTTCAAGTTTTAATCTTCCA s panTro5.chr19 36106483 36 + 61309027 CCTTTCTACTGTTAATGTTCAAGTTTTAATCTTCCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39852537 36 + 64411610 CCTTTCTACTGTTAATGTTCAAGTTTTAATCTTCCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6270279 36 - 8369475 CCTTTCTACTGTTAATGTTCAAGTTTTAATCTTCCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63864994 36 - 106955855 CCTTTCTACTGTTAATGCTCAAGTTTTAATCTTCCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30173533 36 + 53671032 CCTCTCTACTCTTAATGCTCAAGTTTTAACCTTCCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34626409 36 + 59248254 CCTCTCTACTCTTAATGCTCAAGTTTTAACCTTCCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4494192 36 - 13342542 CCTCTCTACTCTTAATGTTCAAGTTTTAACCTTCCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5424999 36 + 7714307 CCTCTCTACTCTTAATGCTCAAGTTTTAACCTTCCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29232234 36 + 50890351 CCTCTCTACTCTTAATGCTCAAGTTTTAACCTTCCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 855819 36 - 2385121 CCTCTCTACTCTTAATGCTCAAGTTTTAACCTTCCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2291724 36 + 4274983 CCTCTCTACTCTTAATGCTCAGGTTTTAACCTTCCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28525114 36 + 49145316 CCTTTCTACTCTTAATGCTCAGGTTTTAACCTTTTG i calJac3.chr22 I 305 C 0 s cebCap1.NW_016107633v1 1580174 36 - 2680843 CCTTTCTACTCTTAATGCTCAAGTTTTAACCTTTTG i cebCap1.NW_016107633v1 I 318 C 0 s aotNan1.NW_018505377v1 331310 36 - 4471408 CCTTTCTACTCTTAATGCTCAAGTTTTAACCTTTTG i aotNan1.NW_018505377v1 I 314 C 0 s otoGar3.GL873654 5442650 23 + 5549422 --TCTTTGCCTTGACTGC-----------CCTTCAG i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 522717 8984 + 2501019 T e micMur3.chr22 3933629 1046 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4579001 6322 - 122678785 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=1029568.000000 s hg38.chr19_GL383574v1_alt 37900 86 + 155864 GACTTCTCATTTGTTCTGTAACAGTATCTTCTAGCCACGTGTGCCCTTCTAATCTCTCTTGTGGAATTTGTTCTTCACAATACTAC s panTro5.chr19 36106519 86 + 61309027 GACTTCTCATTTGTTCTGTAACAGTATCTTCTAGCCACGTGTGCCCTTTTAATCTCTCTTGTGGAATTTGTTCTTCACAATACTAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39852573 86 + 64411610 GACTTCTCATTTGTTCTGTAACAGTATCTTCTAGCCACGTGTGCCCTTTTAATCTCTCTTGTGGAATTTGTTCTTCACAATACTAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6270315 86 - 8369475 GACTTCTCATTTGTTCTGTAACAGTATCTTCTAGCCACGTGTGCCCTTCTAATCTCTCTTGTGGAATTTGTTCTTCACAATACTAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63865030 85 - 106955855 GACTTCTCATTTGTTCTGTAACAGTATCTTCTAG-CACATGTGCCCTTCTAATCTCTCTTGTGGAATTTGTTCTTCACAATACTAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30173569 86 + 53671032 GACTTCTCATTTGTTCTGTAACAGTATCTTCTAGCCATATGTGCCCTTCTAATCTGTCTTGTGGAATTTGTTCTTCACAATACTAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34626445 86 + 59248254 GACTTCTCATTTGTTCTGTAACAGTATCTTCTAGCCATATGTGCCCTTCTAATCTGTCTTGTGGAATTTGTTCTTCACAATACTAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4494228 86 - 13342542 GACTTCTCATTTGTTCTGTAACAGTATCTTCTAGCCATATGTGCCCTTCTAATCTGTCTTGTGGAATTTGTTCTTCACAATACTAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5425035 86 + 7714307 GACTTCTCATTTGTTCTGTAACAGTATCTTCTAGCCATGTGTGCCCTTCTAATCTCTCTTGTGGAATTTGTCCTTCACAATACTAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29232270 86 + 50890351 GACTTCTCATTTGTTCTGTAACAGTATCTTCTAGCCATATGTGCCCGTCTAATCTGTCTTGTGGAATTTGTTCTTCACAATACTAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 855855 86 - 2385121 GACTTCTCATTTGTTCTGTAACAGTATCTTCTAGCCATATGTGCCCTTCTAATCTCTCTTGTGGAATTTGTTCTTCACAATACTAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2291760 86 + 4274983 GACTTCTCATTTGTTCTGTAACAGTATCTTCTAGCCATATGTGCCCTTCTAATCTCTCTTGTGGAATTTATTCTTCACAATACTAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28525150 86 + 49145316 GACTTCTCATTTGTTCTGTAACAGTATCTTCTAGCCATGTGTACCCTTCCAATCTCTCTTGTATTATTTGTTCTTCACAATACTAC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1580210 86 - 2680843 GACTTCTCATTTGTTCTGTAACAGTATCTTCTAGCCATGTGTACCCTTCCAATCTCTCTTGTGTAATTTGTTCTTCACAATACTAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 331346 86 - 4471408 GACTTCTCATTTGTTCTGTAACAGTATCTTCTAGCCATGTGTACCCTTCTAATCTCTCTTGTGTAATTTGTTCTTCACAATACTAC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3934675 86 - 30143674 GACCTCTCACTTATTCTATAACAGTATCTTCCAGCTATGCGTGCCCTTCTGAACTCTCTTGTCCAATTTGTTCTTTGCAATACTAG i micMur3.chr22 I 1046 C 0 s proCoq1.NW_012149263v1 513733 85 + 2501019 GACCTCTCATTGATTCTGTAACAGTATCTTCCAGCTATGTGTGCCCTTCTGAACTCTTTTG-CCAATTTGTTCTTTACAATACTAG i proCoq1.NW_012149263v1 T 8984 C 0 s otoGar3.GL873654 5442673 84 + 5549422 GACCTCTC--TTATTCCGTAGCGGTTTCTTTCAGCTAGGTATGCCTTTCTGAACTCTTTTGTTAAACTTGTTCTGTACAGTACAAC i otoGar3.GL873654 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4579001 6322 - 122678785 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=659099.000000 s hg38.chr19_GL383574v1_alt 37986 56 + 155864 AAGAATTCTATTGCATTGAAAACCCCAAATCTTATTAAGCCAGCC-TCCATCATTAG s panTro5.chr19 36106605 56 + 61309027 AAGAATTCTATTGCATTGAAAACCCCAAATCTTATTAAGCCAGCC-TCCATCATTAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39852659 56 + 64411610 AAGAATTCTATTGCATTGAAAACCCCAAATCTTATTAAGCCAGCC-TCCATCATTAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6270401 56 - 8369475 AAGAATTCTATTGCATTGAAAACCCCAAATCTTACTAAGCCAGCC-TCCATCATTAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63865115 56 - 106955855 AAGAATTCTATTGCATTGAAAACCGCAAATCTTATTAAGCCAGCC-TCCATCATTAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30173655 56 + 53671032 AAGAACTTGATTGCACTGAAAACCCCAAATCTTATTAAGCCAGCC-TCCATCATTAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34626531 56 + 59248254 AAGAACTTGATTGCACTGAAAACCCCAAATCTTATTAAGCCAGCC-TCCATCATTAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4494314 56 - 13342542 AAGAACTTGATTGCACTGAAAACCCCAAATCTTATTAAGCCAGCC-TCCATCATTAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5425121 56 + 7714307 AAGAACTCGATTGCATTGAAAACCCCAAATCTTATTAAGCCAGCC-TCCATCATTAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29232356 56 + 50890351 AAAAACTCAATTGCATTGAAAACCCCAAATCTTATTAAGCCAGCC-TTCATCATTAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 855941 56 - 2385121 AAGAACTCGATTGCATTGAAAACCCCAAATCTTATTAAGCCAGCC-TCCATCATTAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2291846 56 + 4274983 AAGAACTCGATTGCATTGAAAACCCCAAATCTTATGAAGCCAGCC-TCCATCATTAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28525236 55 + 49145316 AAGAACTCTATTGCGTTGAAAACCCCAAATCTGATTAAGCCA-CC-TCCATCATTAA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1580296 54 - 2680843 AAGAACTC--TTGCGTTGAAAACCCCAAATCTGATTAAGCCAGCC-TCCATCATTAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 331432 56 - 4471408 AAGAACTCTATTGCGTTGAAAACCCCAAATCTGATTAAGCCAGCC-TCCATCATTAG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3934761 57 - 30143674 AAGAGTTGTATTCTTTTGGAAACCATAAATCTTATTAAGTCAGTCTTCCATCATTAT i micMur3.chr22 C 0 I 13 s proCoq1.NW_012149263v1 513818 57 + 2501019 AAGAATTATATTCTCTTGGAAACTGTAAATCTGATTAAGTCAGTCTTCCATCATTAG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5442757 57 + 5549422 AAGAATTGTATTCGGTTGGAAAGCCCAAATCTGATTACATCAGCCTTCCATGATTAG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4585323 53 - 122678785 AAGAATTG---TCTGTTAGAAATACTAAATCTGATCAAACCAGTC-TCCATCATTAG i canFam3.chr1 I 6322 C 0 e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=163332.000000 s hg38.chr19_GL383574v1_alt 38042 12 + 155864 AGCATGTTTCTC s panTro5.chr19 36106661 12 + 61309027 AGCATGTTTCTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39852715 12 + 64411610 AGCATGTTTCTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6270457 12 - 8369475 AGCATGTTTCTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63865171 12 - 106955855 AGCATGTTTCTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30173711 12 + 53671032 AGCATGTTTCTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34626587 12 + 59248254 AGCATGTTTCTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4494370 12 - 13342542 AGCATGTTTCTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5425177 12 + 7714307 AGCATGTTTCTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29232412 12 + 50890351 AGCATGTTTCTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 855997 12 - 2385121 AGCATGTTTCTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2291902 12 + 4274983 AGTATGTTTCTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28525291 12 + 49145316 AGCATGTTTCTC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1580350 12 - 2680843 AGCATGTTTCTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 331488 12 - 4471408 AGCATGTTTCTC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 513875 12 + 2501019 AGCATGTTTTTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5442814 12 + 5549422 AGCATGTTTTTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4585376 12 - 122678785 AGCATGTTTCTC i canFam3.chr1 C 0 C 0 e micMur3.chr22 3934818 13 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=1303800.000000 s hg38.chr19_GL383574v1_alt 38054 102 + 155864 AAACTCTTG---GTGTGTGCAAATCATTCTTATTCTGTGATTTCTATTTTCATGCTTTTTCAGTTTGCTTCATTTGCCATATGATAGAGGTTTTC----TTCAGACCAT s panTro5.chr19 36106673 102 + 61309027 AAACTCTTG---GTGTGTGCAAATCATTCTTATTCTGTGATTTCTATTTTCATGCTTTTTCAGTTTGCTTCATTTGCCATATGATAGAGGTTTTC----TTCAGACCAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39852727 102 + 64411610 AAACTCTTG---GTGTGTGCAAATCATTCTTATTCTGTGATTTCTATTTTCATGCTTTTTCAGTTTGCTTCATTTGCCATATGATAGAGGTTTTC----TTCAGACCAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6270469 102 - 8369475 AAACTCTTG---GTGTGTGCAAATCATTCTTATTCTGTGATTTCTGTTTTCATGCTTTTTCAGTTTGCTTCATTTGCCATATGATAGAGGTTTTC----TTCAGACCAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63865183 102 - 106955855 AAACTGTTG---GTGTGTGCAAATCATTCTTATTCTGTGGTTTCTATTTTCATGCTTTTTCAGTTTGCTTGATTTGCCATATGATAGAGGTTTTC----TTCACACCAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30173723 102 + 53671032 AAACTCTTG---GTGTGTGCAAATCATTCTTATTCTGTGATTTCTGTTTTCATGCTTTTTCAGTTTGCTTCATTTGCCATATGATAGAGTTTTTC----TTCATACCAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34626599 102 + 59248254 AAACTCTTG---GTGTGTGCAAATCATTCTTATTCTGTGATTTCTGTTTTCATGCTTTTTCAGTTTGCTTCATTTGCCATATGATAGAGTTTTTC----TTCATACCAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4494382 102 - 13342542 AAACTCTTG---GTGTGTGCAAATCATTCTTATTCTGTGATTTCTGTTTTCATGCTTTTTCAGTTTGCTTCATTTGCCATATGATAGAGTTTTTC----TTCATACCAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5425189 102 + 7714307 AAACTCTTG---GTGTGTGCAAATCATTCTTCTTCTGTGATTTCTGTTTTCATGCTTTTTCAGTTTGCTTCATTTACCATATGATAGAGTTTTTC----TTCACACCAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29232424 102 + 50890351 AAACTCTTG---GTGTGTGCAAATCATTCTTATTCTGTGATTTCTGTTTTCATGCTTTTTCAGTTTGCTTCATTTGCCATATGATAGAGTTTTTC----TTCACACCAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 856009 102 - 2385121 AAACTCTTA---GTGTGTGCAAATCATTCTTCTTCTGTGATTTCTGTTTTCATGCTTTTTCAGTTTGCTTCATTTGCCATATGATAGAGTTTTTC----TTCACACCAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2291914 102 + 4274983 AAACTCTTG---GTGTGTGCAAATCATTCTTATTCTGTGATTTCTGTTTTCATGCTTTTTCAGTTTGCTTCATTTGCCATATGATAGAGTTTTTC----TTCACACCAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28525303 102 + 49145316 AAATGCTTG---TTGTGTACAAATCGTTCTTATTCTGTGGCTTCTGTTTTCATGCTTTTTCAGTTTGTTTCATTTGCCATATGATAGAGTTTTTC----TTCACACCAT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1580362 102 - 2680843 AAATGCTTG---TTGTGTACAAATCGTTCTTATTCTGTGGTTTCTGTTTTCATGCTTTTTCAGTTTGTTTCATTTGCCATATGATAGAGTTTTTC----TTCACACCAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 331500 102 - 4471408 AAATGCTTG---TTGTGTACAAATCGTTCTTATTCTGTGGTTTCTGTTTTCATGCTTTTTCAGTTTGTTTAATTTGCCATATGATAGAGTTTTTC----TTCACACCAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3934831 101 - 30143674 -AAACATTG---GTGTGTGCACAGCATTCTCATTCCATGGTTTCTACTTTCATGCTTTTTCAGTTTGCCTCATTTGCTACATGATAGAAGTTTTC----TTCACACCAT i micMur3.chr22 I 13 C 0 s proCoq1.NW_012149263v1 513887 102 + 2501019 AAACTTTTG---GTGTGTGCAAAGCATTCTCATTCCGTGGTTTCTGTTTTCATGCCTTTTCAATCTGCCTCATTTGCTGTATGTTAGAAGTTTTC----TTCACACCAT i proCoq1.NW_012149263v1 C 0 I 15661 s otoGar3.GL873654 5442826 105 + 5549422 --AACATTAGGTGTGTGTGCAAATCATTCTTATTCCATGGTTTCTGTTTTCATGCTTTTTCATTTTGCCTCATTTGGTGTAAGATAGAGGTTTTCTTTATTCACACT-- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4585388 99 - 122678785 ATACTCTTG---GTCTGTGCAATTAATTCATTCTCGATGGGCTCTATTTTCATACTTTTTCATTTTCCT---CTTTCTGTATGAAAGAGATTTTC----TTCATACCAC i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=534068.000000 s hg38.chr19_GL383574v1_alt 38156 42 + 155864 ATTTTGGAAAGTATGCTCTTAGTTTTAAATTCTACTATGGGT s panTro5.chr19 36106775 42 + 61309027 ATTTTGGAAAGTATGCTCTTAGTTTTAAATTCTACTATGGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39852829 42 + 64411610 ATTTTGGAAAGTATGCTCTTAGTTTTAAATTCTACTATGGGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6270571 42 - 8369475 ATTTTGGAAAGTATGCTCTTAGTTTTAAATTCTACTATGGGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63865285 42 - 106955855 ATTTTGGAAAGTATGCTCTTAGTTTTAAATTCTACTATGGGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30173825 42 + 53671032 ATTTTGGAAAGTATGCTCTTGGTTTTAAATTCTACTATGGGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34626701 42 + 59248254 ATTTTGGAAAGTATGCTCTTGGTTTTAAATTCTACTATGGGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4494484 42 - 13342542 ATTTTGGAAAGTATGCTCTTGGTTTTAAATTCTACTATGGGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5425291 42 + 7714307 ATTTTGGAAAGTATGCTCTTAGTTTTAAATTCTACTATGGGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29232526 42 + 50890351 ATTTTGGAAAGTATGCTCTTAGTTTTAAATTCTACTATGGGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 856111 42 - 2385121 ATTTTGGAAAGTATGCTCTTAGTTTTAAATTCTACTATGGGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2292016 42 + 4274983 ATTTTGGAAAGTATGCTCTTAGTTTTAAATTCTACTATGGGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28525405 42 + 49145316 ATTTTGGAAAGTATGCTCTTAGTTTTAAATTCTAATATGAGT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1580464 42 - 2680843 ATTTTGGAAAGTATGCTCTTAGTTTTAAATTCTAATATGAGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 331602 42 - 4471408 ATTTTGGAAAGTATGCTCTTAGTTTTAAATTCTAATATGAGT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3934932 42 - 30143674 GTTTTAGGAAGTATGCCCTTAGTTTTAAATTCTACCATGGGT i micMur3.chr22 C 0 I 381 s otoGar3.GL873654 5442931 42 + 5549422 ATTTTGGTAAGTATGCCTTTAGTTTTAAACTCTACTGTGGGT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4585487 42 - 122678785 GTTTTGGAAAATATGCCCTTAGttttcaactttcttgttggt i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 513989 15661 + 2501019 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=52698.000000 s hg38.chr19_GL383574v1_alt 38198 5 + 155864 TATTT s panTro5.chr19 36106817 5 + 61309027 TATTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39852871 5 + 64411610 TATTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6270613 5 - 8369475 TATTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63865327 5 - 106955855 TATTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30173867 5 + 53671032 TATTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34626743 5 + 59248254 TATTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4494526 5 - 13342542 TATTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5425333 5 + 7714307 TATTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29232568 5 + 50890351 TATTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 856153 5 - 2385121 TATTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2292058 5 + 4274983 TATTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28525447 5 + 49145316 TACTT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1580506 5 - 2680843 TACTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 331644 5 - 4471408 TACTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5442973 5 + 5549422 TACTT i otoGar3.GL873654 C 0 I 284 s canFam3.chr1 4585529 5 - 122678785 tacct i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 513989 15661 + 2501019 I e micMur3.chr22 3934974 381 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=257796.000000 s hg38.chr19_GL383574v1_alt 38203 30 + 155864 CCAAGACCCATAGTAGAATTTAACAAATTC s panTro5.chr19 36106822 30 + 61309027 CCAAGACCCATAGTAGAATTTAACAAATTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39852876 30 + 64411610 CCAAGACCCATAGTAGAATTTAACAAATTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6270618 30 - 8369475 CCAAGACCCATAGTAGAATTTAACAAATTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63865332 30 - 106955855 CCAAGACCCATAGTAGAATTTAACAAATTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30173872 30 + 53671032 CCAAGACCCATAGTAGAATTTAACAAATTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34626748 30 + 59248254 CCAAGACCCATAGTAGAATTTAACAAATTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4494531 30 - 13342542 CCAAGACCCATAGTAGAATTTAACAAATTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5425338 30 + 7714307 CCAAGACCCGTAGTAGAATTTAACAAATTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29232573 30 + 50890351 CCAAGACCCATAGTAGAATTTAACAAATTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 856158 30 - 2385121 CCAAGACCCATAGTAGAATTTAACAAATTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2292063 30 + 4274983 CCAAGACCCATAGTAGAATTTAACAAATTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28525452 30 + 49145316 TGAAGACCCACAGTAGAATGTAACAAATTC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1580511 30 - 2680843 TGAAAACCCGCAGTAGAATTTAAGAAATTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 331649 30 - 4471408 TGAAGACCCACAGTAGAATTTAACAAATTC i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4585534 8 - 122678785 ttaggacc---------------------- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 513989 15661 + 2501019 I e micMur3.chr22 3934974 381 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5442978 284 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=2940834.000000 s hg38.chr19_GL383574v1_alt 38233 319 + 155864 TTTCAAATAAAA-AATTTTAAAGCCTTCGCTTA-----TTATCAACTAGCC---------AAAAAAAAAAAAAGTGTATCAAGTGAC------TC-CTACTTGACATGATGAGAGATGAAAGTGTAAGTTTAGATACTACTACTGTCTGTTGAG-TTTCCTCTCTCTCCATTCATTTTAATCTCCCAATTTTTGTTAAAATGT--TGTGATATACTGTT----CTTAGTTTGTTACACTTTGTAACTTTGTAGTCTTTTCCAGAA--------CTAT-----TTCTATTCTAGAACCAAAGTAAATTGTCATGTAGACTTCTGTGTTGAAATGAATTTATTGTCCATTTCTTATCTTTAGA-- s panTro5.chr19 36106852 321 + 61309027 TTTCAAATAAAA-AATTTTAAAGCCTTCGCTTA-----TTATCAACTAGCC-------AAAAAAAAAAAAAAAGTGTATCAAGTGAC------TC-CTACTTGACATGATGAGAGATGAAAGTGTAAGTTTAGATACTACTACTGTCTGTTGAG-TTTCCTCTCTCTCCATTCATTTTAATCTCCCAATTTTTGTTAAAATGT--TGTGATATACTGTT----CTTAGTTTGTTATACTTTGTAACTTTGTAGTCTTTTCCAGAA--------CTAT-----TTCTATTCTAGAACCAAAGTAAATTGTCATGTAGACTTCTGTGTTGAAATGAATTTATTGTCCATTTCTTATCTTTAGA-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39852906 321 + 64411610 TTTCAAATAAAA-AATTTTAAAGCCTTCGCTTA-----TTATCAACTAGCC-------AAAAAAAAAAAAAAAGTGTATCAAGTGAC------TC-CTACTTGACATGATGAGAGATGAAAGTGTAAGTTTAGATACTACTACTGTCTGTTGAG-TTTCCTCTCTCTCCATTCATTTTAATCTCCCAATTTTTGTTAAAATGT--TGTGATATACTGTT----CTTAGTTTGTTACACTTTGTAACTTTGTAGTCTTTTCCAGAA--------CTAT-----TTCTATTCTAGAACCAAAGTAAATTGTCATGTAGACTTCTGTGTTGAAATGAATTTATTGTCCATTTCTTATCTTTAGA-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6270648 321 - 8369475 TTTCAAATAAAA-AATTTTAAAGCCTTCGCTTA-----TTATCAACTAGCC-------AAAAAAAAAAAAAAAGTGTATCAAGTGAC------TA-CTACTTGACATGATGAGAGATGAAAGTGTAAGTTTAGATACTACTACTGTCTGTTGAG-TTTCCTCTCTCTCCATTCATTTTAATCTCCCAATTTTTGTTAAAATGT--TGTGATATACTGTT----CTTAGTTTGTTACACTTTGTAACTTTGTAGTCTTTTCCAGAA--------CTAT-----TTCTATTCTAGAACCAAAGTAAATTGTCATGTAGACTTCTGTGTTGAAATGAATTTATTGTCCATTTCTTATCTTTAGA-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63865362 313 - 106955855 TTTCAAATAAAA-AATTTTAAAGCCTTCGCTTA-----TTATCAACTAGCC------------AAAAAAAAAAGTGTATCAAGTGGC------TC-CTACTTGACATGATGAGAGATGAAAGTGTAAGTTTAGATACTACTATTGTCGAGT----Tttcctctctctccattcatcttaatctcccaatttttgttaaaatgt--tgtgatatactgtt----cttagtttgtttcactttgtaactttgtagtcttttccagaa--------ctat-----ttctattctagaaccaaagtaaattgtcatgtgcacttctgtgtttaaatgaatttattgtccatttcttatctttgga-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30173902 323 + 53671032 TTTCAAATAAAA-AATTTTAAAGCCTTCGCTTA-----GTGTCAACTAACC------aaaaaaaaaaaaaaaaaTGTGTCAAGTGAC------TC-CTACTTGACATGATGAGAGATGAAAGTGTAGGTTTAGATACTACTACTGTCTGTTCAGTTTTCCTTTTTCTCCATTCATTTTAATCTCCCAATTTTTGTTAAAATGT--TGTGATATACTGTT----CTTAGTTTGTTACACTTTGTAACTTTCTAGTCTTTTCCAGAA--------CTAT-----TTCTATTCTAGAACCATAGTAAATTGTCATGTACACATCTTTGTTTAAATGAATTTATTGTCCATTTCTTATCTTTGGA-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34626778 323 + 59248254 TTTCAAATAAAA-AATTTTAAAGCCTTCGCTTA-----GTGTCAACTAACC------aaaaaaaaaaaaaaaaaTGTGTCAAGTGAC------TC-CTACTTGACATGATGAGAGATGAAAGTGTAAGTTTAGATACTACTACTGTCTGTTCAGTTTTCCTTTTTCTCCATTCATTTTAATCTCCCAATTTTTGTTAAAATGT--TGTGATATACTGTT----CTTAGTTTGTTACACTTTGTAACTTTCTAGTCTTTTCCAGAA--------CTAT-----TTCTATTCTAGAACCATAGTAAATTGTCATGTACACATCTTTGTTTAAATGAATTTATTGTCCATttcttatctttgga-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4494561 322 - 13342542 TTTCAAATAAAA-AATTTTAAAGCCTTCGCTTA-----GTGTCAACTAACC-------AAAAAAAAAAAAAAAATGTGTCAAGTGAC------TC-CTACTTGACATGATGAGAGATGAAAGTGTAAGTTTAGATACTACTACTGTCTGTTCAGTTTTCCTTTTTCTCCATTCATTTTAATCTCCCAATTTTTGTTAAAATGT--TGTGATATACTGTT----CTTAGTTTGTTACACTTTGTAACTTTCTAGTCTTTTCCAGAA--------CTAT-----TTCTATTCTAGAACCATAGTAAATTGTCATGTACACATCTTTGTTTAAATGAATTTATTGTCCATTTCTTATCTTTGGA-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5425368 321 + 7714307 TTTCAAATAAAA-AATTTTAAAGCCTTCGCTTA-----GTATCAACTAACC------AAAAAAAAAAAAAAAA--GTGTCAAGGGAC------TC-CTACTTGACATGATGAAAGATGAAAGTGTAAGTTTAGATACTACTACTGTCTGTTCAGTTTTCCTTTTTCTCCATTCATTTTAATCTCCTAATTTTTGTTAAAATGT--TGTGATATACTGTT----CTTAGTTTGTTACACTTTGTAACTTTCTAGTCTTTTCCAGAA--------CTAT-----TTCTATTCTAGAACCATAGTAAATTGTCATGTACACATCTTTGTTTAAATGAATTTGTTGTCCATTTCTTATCTTTGGA-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29232603 326 + 50890351 TTTCAAATAAAA-AATTTTAAAGCCTTCGCATA-----GTATCAACTAACCa---aaaaaaaaaaaaaaaaaaaaGTGTCAAGTGAC------TC-CTACTTGACATGATGAGAGATGAAAGTGTAAGTTTAGATACTACTACTGTCTGTTCAGTTTTCCTTTTTCTCCATTCATTTTAATCTCCCAATTTTTGTTAAAATGT--TGTGATATACTGTT----CTTAGTTTGTTACACTTTGTAACTTTCTAGTCTTTTCCAGAA--------CTAT-----TTCTATTCTAGAACCATAGTAAATTGTCATGTACACATCTTTGTTTAAATGAATTTATTGTCCATTTCTTATCTTTGGA-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 856188 324 - 2385121 TTTCAAATAAAA-AATTTTAAAGCCTTCGCTTA-----GTATCAACTAACC-----aaaaaaaaaaaaaaaaaaaGTGTCAAGTGAC------TC-CTACTTGACATGATGAGAGATGAAAGTGTAAGTTTAGATACTACTACTGTCTGTTCAGTTTTCCTTTTTCTCCATTCATTTTAATCTCCCAATTTTTGTTAAAATAT--TGTGATATACTGTT----CTTAGTTTGTTACACTTTGTAACTTTCTAGTCTTTTCCAGAA--------CTAT-----TTCTATTCTAGAACCATAGTAAATTGTCATGTACACATCTTTGTTTAAATGAATTTATTGTCCATTTCTTATCTTTGGA-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2292093 320 + 4274983 TTTCAAATAAAA-AATTTTAAAGCCTTCGCTTA-----GTATCAACTAACC---------AAAAAAAAAAAAAATGTGTCAAGTGAC------TC-CTTCTTGACATGATGAGAGATGAAAGTGTAAGTTTAGATACTACTACTGTCTGTTCAGTTTTCCTTTTTCTCTATTCATTTTAATCTCCCAATTTTTGTTAAAATGT--TGTGATATAGTATT----CTTAGTTTGTTACACTTTGTAACTTTGTAGTCTTTTCCAGAA--------CTAT-----TTCTATTCTAGAACCATAGTAAATTGTCATGTACACTTCTGTGTTTAAATGAATTTATTGTCCATTTCCTATCTTTGGA-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28525482 298 + 49145316 TTTCAAGTAACA-AATTTTAAAGCCTTCATTTA-----GTATCAGCTAAC------------------AAAAAAAGTATCAAGTGAC------TG-CTACTTGACATGATGAGAGATCAAAGTGTAAGTTTAGATACTACCAC---CTGTT-AGTTTTCCTCTCTCTCCATTCATTTTTATCTCCCAATTTTTGTTAAAATGT--TGTGATACACTGTT----CTTAGTTTGTTATACT--------TTGTAGTCTTTTCCAGAA--------CTAT-----TTCTGTTCTAGAACCATA-TAAATTGTCATGTACACTTCTGTGCTTAAATGAATTTATTGTCCATTTGTTATCTTTGGA-- i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1580541 309 - 2680843 TTTCAAATAACA-AACTTTAAAGCCTTCATTTA-----TTATCAACTAACC--------------AAAAAAAAAAGTATCAAGTGAC------TT-GTACTTGACACAATGAGAGATCAAAGTGTAAGTTTAGATATTACCAC---CTGTTGAGTTTTC--CTCTCTCCATTCATTTTCATCTCCCAATTTTTGTTAAAATGT--TGTGATACACTGTT----CTTAGTTTGTTATACTTTGTAACATTGTAGTCTTTTCCAGAA--------CTAT-----TTCTGTTCTAGAACCATA-TAAATTGTCATGTACACTTCTGTGCTTAAATGAATTTATTGTCCGTTTGTTATCTTTGGA-- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 331679 311 - 4471408 TTTCAAATAACA-AATTTTAAAGCCTTCATTTA-----TTATCAACTAACC--------------AAAAGAAAAAGTATCAAGTGAC------TT-CTACTTGACATGATGAGAGATCGAAGTATAAGTTTAGATACTACTGC---CTGTTGAGTTTTCCTCTCTCTCCATTCATTTTCATCTCCTAATTTTTGTTAAAATGT--TGTGATACACTGTT----CTTAGTTTGTTATACTTTGTAACTTTGTAGTCTTTTCCAGAA--------CTAT-----TTCTGTTCTAGAACCATA-TAAATTGGTATGTACACTTCTGTCCTTAAATGAATTTATTGTCCATTTGTTATCTTTGGA-- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5443262 334 + 5549422 tctcaaaaaaaataaagtaaaaGCCTTTG---A-----TTATTAATTTACAAAAGAAAAAGAACAAAAGAAAATTTTGTCAAGTGACACTGTACC-GTACTTGATATGATAGACGGTTAAAGTGTAAGCTCACGTGCTACTACTTTC----ACGTTTCCCTATCTCTCC--TCATTTTCATCTCCTAATTTTTGTTAGAATGCTATGTAACGTGCTGTT----CTAACATAGTCACACTTGGTAACTTTGTAGCCCTTTCCAGACTAGTCAGtttat-----tttctgtctagaaccagaatgaatt---atgtatacttatatgcttaaatgaatttgttgtccatctcttatcttttga-- i otoGar3.GL873654 I 284 C 0 s canFam3.chr1 4585542 292 - 122678785 --tcaaataaca-aaattttaagtctacatatattaatttatcaactttcc--------------------aaaattatcaagtgat------tctctgct-------ataagagatgagagtattaatttatgtatttc------cttttgtgttttcctctatttccactcatcttcatcttccaatttttgttaGAATACTATGTGATAAACCATCTTGACTTATTTTGT--CAATATGTAACCTAACAGCTTTTTTCAGAA--------CCATTAAACTTACATTCTAAGACCATA----------------ATTTGTGTGCTTAAATGAATTTATT---CATCTtttatttatttaaa i canFam3.chr1 C 0 I 169 e proCoq1.NW_012149263v1 513989 15661 + 2501019 I e micMur3.chr22 3934974 381 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=567062.000000 s hg38.chr19_GL383574v1_alt 38552 86 + 155864 TAACACTTTTTTTGAG------TTATTTTGATATACCAAAGCATAAGTCTCTGTGGCTTGTAGTGGTCTGT-----TTTTTGTTTGTttgt-tttgtt s panTro5.chr19 36107173 86 + 61309027 TAACACTTTTTTTGAG------TTATTTTGATATACCAAAGCATAAGTCTCTGTGGCTTGTAGTGGTCTGT-----TTTTTGTTTGTttgt-tttgtt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39853227 86 + 64411610 TAACACTTTTTTTGAG------TTATTTTGATATACCAAAGCATAAGTCTCTGTGGCTTGTAGTGgtctgt-----tttttgtttgtttgt-tttgtt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6270969 85 - 8369475 TAACAC-TTTTTTGAG------TTATTTTGATATACCAAAGCATAAGTCTCTGTGGCTTGTAGTGgtctgt-----tttttgtttgtttgt-tttgtt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63865675 90 - 106955855 taacactttttttgag--ttctttattttgatATACCAAAGCATAAGTCTCTGTGGCTTGTAGTGGTCTGT-----TTTTTGTttgtttgt-tttgtt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174225 79 + 53671032 TGCCACTTTTTTTGCA--TTCTTTATTTTGATATACCATAACATAAGTCTCTGTGGCTTGTAGTGGTCTGA-----TG--T---------T-TTTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627101 79 + 59248254 tgccactttttttgca--ttctttattttgatataccataacataagtctctgtggcttgtagtggtctga-----tg--t---------t-tttttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4494883 81 - 13342542 TGCCACTTTTTTTGCA--TTCTTCATTTTGATATACCATAACATAAGTCTCTGTGGCTTGTAGTGGTCTGA-----TGTTT---------T-TTTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5425689 81 + 7714307 TGCCACTTTTTTTGCA--TTCTTTATTTTGATATACCATAACATAAGTCTCTGTGGCTTGTAGTGGTCTGA-----TTTTT---------T-TTTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29232929 86 + 50890351 TGCCACTTTTTTTGCA--TTCTTTATTTTGATATACCATAACATAAGTCTCTGTGGCTTGTAGTGGTCTGATTTTTTTTTT---------T-TTTTTt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 856512 82 - 2385121 TGCCACTTTTTTTGCA--TTCTTTATTTTGATATACCATAACATAAGTCTCTGTGGCTTGTAGTGGTCTGA----TTTTTT---------T-TTTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2292413 81 + 4274983 TGCCACTTTTTTTGCG--TTCTTTATTTTGATATACCATAACGTAAGTCTCTGTGGCTTGTAGTGGTCTGA-----ttttt---------t-tttttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28525780 79 + 49145316 TAACACTTTTTTTGAA--TTCTTTATTTTGATACAGCAAAGCATAAGTCTCTGTGGCTTGTAATGTACTGA-----TT------------TATTTTTT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1580850 78 - 2680843 TACCACTTTTTTTGAA--TTCTTTATTTTGATATAGCAAAGCATAAGTCTCTGTGGCTTGTAGTGTACTGA-----TT------------T-TTTTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 331990 78 - 4471408 TACCACTTTTTTTGAA--TTCTTTATTTTGATATAGCAAAACATAAGTCTCTGTGGCTTGTAGTGTACTGA-----TT------------T-ATTTTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5443596 72 + 5549422 taccactgtttctgtgagttctttattttgatttaGCAAAGCTTAAGTCTC--TGGCTTATCGTGCACTCA-----CTG------------------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 513989 15661 + 2501019 I e micMur3.chr22 3934974 381 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4585834 169 - 122678785 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=592315.000000 s hg38.chr19_GL383574v1_alt 38638 48 + 155864 tttttctggaaatacagtgaaagcttttgatgaaatttaggccttcat s panTro5.chr19 36107259 48 + 61309027 tttttctggaaatacagtgaaagcttttgatgaaatttaggccttcat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39853313 48 + 64411610 tttttCTGGAAATACAGTGAAAGCTTTTGATGAAATTTAGGCCTTCAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271054 48 - 8369475 tttttCTGGAAATACAGTGAAAGCTTTTGATGAAATTTAGGCCTTCAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63865765 48 - 106955855 tttttctggaaatacagtgaaaacttttgatgaaatttaggccttcat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174304 48 + 53671032 TTTTCCTGGAAATACAGTGAAAACTTTTAATGAAATTTAGACCTTCAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627180 48 + 59248254 ttttcctggaaatacagtgaaaacttttaatgaaatttagaccttcat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4494964 48 - 13342542 TTTTCCTGGAAATACAGTGAAAACTTTTAATGAAATTTAGACCTTCAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5425770 48 + 7714307 CTTTCCTGGAAATACAGTGAAAACTTTTAATGAAATTTAGACCTTCAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233015 48 + 50890351 ttttcctggaaatacagtgaaaacttttaatgaaatttagaccttcat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 856594 48 - 2385121 CTTTCCTGGAAATACAGTGAAAACTTTTAATGAAATTTAGACCTTCAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2292494 48 + 4274983 tttttCTGGAAATACAGTGAAAACTTTTGATGAAATTTAGGCCTTCAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28525859 48 + 49145316 GTTTTCTGGAAATACAGTGAAAACCTTTGATGAAATTTAGGCcttcat i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1580928 48 - 2680843 TTTTCCTGGAAATACAGTGAAAGCCTTTGATGAAATTTAGGCCTTCAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 332068 48 - 4471408 TTTTTCTGGAAATACAGTGAAAGCCTTTGATGAAATTTAGGCCTTCAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3935355 48 - 30143674 TTTTTCTGGAAATTCAGTGAAAGGTTTTGATCAAATTTAGGTCTTCAT i micMur3.chr22 I 381 C 0 s proCoq1.NW_012149263v1 529650 48 + 2501019 TTTTTCTGGAAATTTGGTGAAAGGTTTTGATCAAATTTAGGTCTTCAT i proCoq1.NW_012149263v1 I 15661 C 0 s otoGar3.GL873654 5443668 48 + 5549422 TTTTTCTGGAAATACAATGAAAGCTTTTGATCAAATTTAAGTGTCCAT i otoGar3.GL873654 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4585834 169 - 122678785 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=4173217.000000 s hg38.chr19_GL383574v1_alt 38686 399 + 155864 gttaagacatttctattctgttatatctt-------------taattatatttt-tcttattc-ttttgtc---tatctcaggggcagcagttaac-------tgttggatcttca-taactatcatcttctctctaaccttttt--aatgctgtagtacttt-------ttcatgacatcttgtttaccttttctcaaaattattctcttctagtgatttggtttt-gctgcat-tgactgt---------tgttgcatttattagttatgctgttttatttatcttgtgtaattttctttccttaattctgcatgctaccctttca----------------atgtt-----gttttgatcatA----AAAGTC---TATGCTA---------------TCTGTTTTTCTTG--TGAATGT----------------------------------CGAAGCAGTTGTTTCAGAAAATTTCTTCTATTTTC-TGTGATAAATACTAATACTGAATGTATTTCAT---- s panTro5.chr19 36107307 399 + 61309027 gttaagacatttctgttctgttatatctt-------------taattatatttt-tcttattc-ttttgtc---tatctcaggggcagcagttaac-------tgttggatcttca-taactatcatcttctctctaaccttttt--aatgctgtagtacttt-------ttcatgacatcttgtttaccttttctcaaaattattctcttctagtgatttggtttt-gctgcat-tgactgt---------tgatgcatttattagttatgctgttttatttatcttgtgtaattttctttccttaattctgcatgctaccctttca----------------atgtt-----gttttgatcatA----AAAGTC---TATGCTA---------------TCTGTTTTTCCTG--TGAATGT----------------------------------CGAAGCAGTTGTTTCAGAAAATTTATTCTATTTTC-TGTGATAAATACTAATACTGAATGTATTTCAT---- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39853361 399 + 64411610 GTTAAGACATTTCTGTTCTGTTATATCTT-------------TAATTGTATTTT-TCTTATTC-TTTTGTC---TATCTCAGGGGCAGCAGTTAAC-------TGTTGGATCTTCA-TAACTATCATCTTCTCTCTAACCTTTTT--AATGCTGTAGTACTTT-------TTCATGACATCTTGTTTACCTTTTCTCAAAATTATTCTCTTCTAGTGATTTGGTTTT-GCTGCAT-TGACTGT---------TGATGCATTTATTAGTTATGCTGTTTTATTTATCTTGTGTAATTTTCTTTCCTTAATTCTGCATGCTACCCTTTCA----------------ATGTT-----GTTTTGATCATA----AAAGTC---TATGCTA---------------TCTGTTTTTCTTG--TGAATGT----------------------------------CGAAGCAGTTGTTTCAGAAAATTTATTCTATTTTC-TGTGATAAATACTAATACTAAATGTATTTCAT---- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271102 398 - 8369475 GTTAAGACATTTCTATTCTGTTATATCTT-------------TAATTATATTTT-TCTTATTC-TTTTGTC---TATCTCAGGGGCAGCAGTTAAC-------TGTTGGATCTTCA-TAACTATCATCTTCTCTC-AACCTTTTT--AATGCTGTAGTACTTT-------TTCATGACATCTTGTTTACCTTTTCTCAAAGTTATTCTCTTCTAGTGATTTGGTTTT-GCTGCAT-TGACTGT---------TGATGCATTTATTAGTTATGCTGTTTTATTTATCTTGTGTAATTTTCTTTCCTTAATTCTGCATGCTACCCTTTCA----------------ATGTT-----GTTTTGATCATA----AAAGTC---TATGCTA---------------TCTGTTTTTCTTG--TGAATGT----------------------------------CGAAGCAGTTGTTTCAGAAAATTTCTTCTATTTTC-TGTGATAAATACTAATACTGAATGTATTTCAT---- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63865813 392 - 106955855 gttaagacatttctattctgttatgtctt-------------taattatatttt-tcttattc-ttttgtc---tatctcaggggcagcagttaac---------ttggatcttca-taactatca---tctctctaaccttttt--aatgctgtagtacttt-------ttcatgacatc--gtttacattttctcaaaattattctcttctagtgatttggtttt-actgcat-tgactgt---------tgatgcattttttagttatgctgttttatttatattgtgtaattttctttccttaattctGCATGCTACGCTTTCA----------------ATGTT-----GTTTTGAGCATA----AAAGTC---TATGCTA---------------TCTGTTTTTCTTG--TGAATGT----------------------------------CGAAGCAGTTGTTTCAGAAAATTTCTTCTATTTTA-TGTGATAAATACTAATACTGAATGTATTTCAT---- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174352 397 + 53671032 GTCAAGACATTTCTATTCTGTTATAACTT-------------TAATTTTATTTTCTCTTATTC-TTTTGTC---TGTCTCAGGGGCAGTAGTTAAC-------TGTTGGATCTTCA-TAACTATCATCTTTTCTCTAACCTTTTT--ATTACTGTACTACTTT-------TTCATGACATCTCGTTTACGTTTTCTCAAAATTATTGTCTTCTAGTGATTTGGTTTTAACTGCAT-TGACTGT---------TGATGCATTTATTAGTTATGCTGTTTTATTTATCTTGTATAATTTTCTTTCCTTAATTCTGCATGCTACCCTTTCA----------------GTGTT-----GTTTTGATCATA----AGAGTC---TATG-------------------CTGTTTTTCTTG--TGAATGT----------------------------------CGAAGCAGTCCTTTCAGAAAATTTCTTCTATTTTC-TGTGATAAATACTGATACTGAATGTATTTCAT---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627228 397 + 59248254 gtcaagacatttctattctgttataactt-------------taattttattttctcttattc-ttttgtc---tgtctcaggggcagtagttaac-------tgttggatcttca-taactatcatcttttctctaaccttttt--attactgtactacttt-------ttcatgacatctcgtttacgttttctcaaaattattgtcttctagtgatttggttttaactgcat-tgactgt---------tgatgcatttattagttatgctgttttatttatcttgtataattttctttccttaattctgcatgctaccctttca----------------gtgtt-----gttttgatcatA----AGAGTC---TATG-------------------CTGTTTTTCTTG--TGAATGT----------------------------------CGAAGCAGTCCTTTCAGAAAATTTCTTCTATTTTC-TGTGATAAATACTGATACTGAATGTATTTCAT---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495012 401 - 13342542 GTCAAGACATTTCTATTCTGTTATAACTT-------------TAATTTTATTTTCTCTTATTC-TTTTGTC---TGTCTTAGGGGCAGTAGTTAAC-------TGTTGGATCTTCA-TAACTATCATCTTTTCTCTAACCTTTTT--ATTGCTGTACTACTTT-------TTCATGACATCTCGTTTACATTTTCTCAAAATTATTGTCTTCTAGTGATTTGGTTTTAACTGCAT-TGACTGT---------TGATGCATTTATTAGTTATGCTGTTTTATTTATCTTGTATAATTTTCTTTCCTTAATTCTGCATGCTACCCTTTCA----------------GTGTT-----GTTTTGATCATA----AGAGTC---TATGCTA---------------TCTGTTTTTCTTG--TGAATGT----------------------------------CGAAGCAGTCCTTTCAGAAAATTTCTTCTATTTTC-TGTGATAAATACTAATACTGAATGTATTTCAT---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5425818 401 + 7714307 GTCAAGACATTTCTATTCTGTTATAACTT-------------TAATTTTATTTTCTCTTATTC-TTTTGTC---TGTCTCAGGGGCAGTAGTTAAC-------TGTTGGATCTTCA-TAACTATCATCTTTTCTCTAACCTTTTT--ATTGCTGTACTACTTT-------TTCATGACATCTCGGTTACGTTTTCTCAAAATTATTGTCTTCTAGTGATTTGGTTTTAACTGCAT-TGACTGT---------TGATTCATTTATTAGTTATGCTGTTTTATTTATCTTGTATAATTTTCTTTCCTTAATTCTGCATGCTACCCTTTCA----------------GTGTT-----GTTTTGATCATA----AGAGTC---TATGCTA---------------TCTGTTTTTCTTG--TGAATGT----------------------------------CGAAGCAGTCCTTTCAGAAAATTTCTTCTATTTTC-TGTGATAAATACTAATACTGAATGTATTTCAT---- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233063 395 + 50890351 gtcaagacatttctattctgttataactt-------------taattttattttctcttattc-ttttgtc---tgtctcaggggcagtagttaac-------tgttggatcttca-taactatcatcttttctctaaccttttt--attgctgtactacttt-------ttcatgacatctcgtttacattttctcaaaattattgtcttctagtgatttggttttaactgcat-tgactgt---------tgatgcatttattagttatgctgttttatttatcttgtataattt--tttccttaattctgcatgctaccctttca----------------atgtt-----gttttgatcatA----AGAGTC---TATG-------------------CTGTTTTTCTTG--TGAATGT----------------------------------CGAAGCAGTCCTTTCAGAAAATTTCTTCTATTTTC-TGTGATAAATACTAATACTGAATGTATTTCAT---- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 856642 401 - 2385121 GTCAAGACATTTCTATTCTGTTATAACTT-------------TAATTTTATTTTCTCTTATTC-TTTTGTC---TGTCTCAGGGGCAGTAGTTAAC-------TGTTGGATCTTCA-TAACTATCATCTTTTCTCTAACCTTTTT--ATTGCTGTACTACTTT-------TTCATGACATCTCGGTTACGTTTTCTCAAAATTATTGTCTTCTAGTGATTTGGTTTTAACTGCAT-TGACTGT---------TGATGCATTTATTAGTTATGCTGTTTTATTTATCTTGTATAATTTTCTTTCCTTAATTCTGCATGCTACCCTTTCA----------------GTGTT-----GTTTTGATCATA----AGAGTC---TATGCTA---------------TCTGTTTTTCTTG--TGAATGT----------------------------------CGAAGCAGTCCTTTCAGAAAATTTCTTCTATTTTC-TGTGATAAATACTAATGCTGAATGTATTTCAT---- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2292542 401 + 4274983 GTCAAGACATTTCTATTCTGTTGTAACTT-------------TAATTATATTTTCTCTTATTC-TTTTGTC---TGTCTCAGGGGCAGTAGTTAAC-------TGTTGGATCTTCA-TAACTATCATCTTTTCTCTAACCTTTTT--ATTACTGTACTGCTTT-------TTCATGACATCTCGTTTATGTTTTCTCAAAATTATTCTCTTCTAGTGATTTGCTTTTAACTGCAT-TGACTGT---------TGATGCATTTATTAGTTATGCTGTTTTATTTATCTTGTATAATTTTCTTTCCTTAATTCTGCATGCTACCCTTTCA----------------GTGTT-----GTTTTGATCATA----AGAGTC---TATGCTA---------------TCTGTTTTTCTTG--TGAATAT----------------------------------CAAAGCAGTGCTTTCAGAAAATTTCTTCTATTTTC-TGTGATAAATACTAATACTGAATGTATTTCAT---- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28525907 410 + 49145316 gtcaagacatttctattctgttatatctt-------------taattatattttctcttattc-ttttatc---tacctaaggggcagcagttaac---taactgttggatcttca-taactatcatcttctctctaaccttttt--attgctatacta---t-------ttcatgacatctcgtttacattttctcaaaattattctcttctagtgatttggtttt-actgcat-tgactgttctgtttgttgatgcatttattaattatgcagttttatttatcttatataattttcattccttaattctgcatgctacattttca----------------gtgtt-----gttttaatcata----agagtc---tatgctt---------------tgtgtttttcttG--TGAATGT----------------------------------CAAAGCAGTTCTTTCAGAAAATTTCTTCTATTTTC-TGTGATAAATATTAATACTGAATGTATTTCAT---- i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1580976 392 - 2680843 GTCAAGACATTTCTATTCTGTTATATCTT-------------TAATCATATTTTCTCTTATTC-TTTTGTC---TACCTAAGGGACAATAGTTAAC---TAACTGTTGGATCTTCA-------------------TAACCTTTTT--ATTGCTATACTA---T-------TTCATGACATCTTGTTTACATTTTCTCAAAATTACTCTCTTCTAGTGATTTGGTTTT-ACTGCAT-TGGCTGTTCTGTTTGGTGATGCATTTATTAGTTATGCTGTTTTATTTATCTTATATAATTTTCATTCCTTAATTCTGCATGCTACCTTTTCA----------------GTGTT-----GTTTTAATCATA----AGAGTC---TATGCTT---------------TGTGTTTTTCTTG--TGAATGT----------------------------------CAAAGCAGTTCTTTCAGAAAATTTCTTCTATTTTC-TGTGATAAATATTAATACTGAATGTATTTCAT---- i cebCap1.NW_016107633v1 C 0 I 154 s aotNan1.NW_018505377v1 332116 407 - 4471408 GTCAAAACATTTCTATTCTGTTATATCTT-------------TAATTAAATTTTCTCTTATTC-TTTTGTC---TACCTAAGGGGCAGCAGTTAAC---TAACTGTTGGATCTTCA-TAACTATCATCTTCTCTCTAACCTTTTT--ATTGCTATACTA---T-------TTCATGACATCTTGTTTACATTTTCTCAAAATTACTCTCTTCTAGTGATTTGGTTTT-ACTTCAT-TAACTGTTCTGTTTGTTGATACATTTATTAGTTATGCTGTTTTATTTATCTTATATAGTTTTCATTCCTTAATTCTGCATGCTACCTTTTCA----------------G---T-----GTTTTAATCATG----AGAGTC---TATACTT---------------TGTGTTTTTCTTG--TGAATGT----------------------------------CAAAGCAGTTCTTTCAGAAAATTTCTTCTATTTTC-TGTGGTAAGTATTAATACTGAATATATTTCAT---- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3935403 409 - 30143674 GTCAGGAAATTTCTATTCTATCGTATCCT-------------TACTTATATTTTCTCTTATTTATTTTGTTGTCTACCTCAGGGGCAGCAGTTAAC---TAACTGTTGGGTCTTTA-TAAC--TCATCTTC----TAACTTTTTT--ATTGCTGTGCTGCTTT-------TTCTTTACATCTTGTTTGGTTTTTCCCAAAATTAGTCTGTATTAGTGACTCAGTTTT-CTTGCAC-TGACTGTTCTGTTAT-TGATGCATTTATTAATTGTGCTGTTATATTTGTAT--TATAACTTTCTTTGTTTAATTCTGCATGGTACCTTTTCA----------------GTGTT-----ATGTTAATCTTG----AGAGTC---TGTTTTG---------------TATATTTATCTTG--AGAGTGT----------------------------------TGAAGCAATTCTTTCAGAAATTTTCTTCTGTTTTCTTGTGATAAATATTAATCCTGAATGTATTTCAT---- i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 529698 411 + 2501019 GTCAGGAAATTTCTATTCTATTGTATCCT-------------TACTTATATTTTCTCTTATTTATTTTGTTGTCTACCTCAGGGG-AACAGTTAAC---TAACTGTTGGATCTTTA-TAAC--TCATCTTC----TAACCTTTTT--ATTGCTGTGCTGCTTT-------TTCTTTATATCTTGTTTGCTTTTT-CCAAAATTGTTCTGTATTAGTGACTTGGTTTA-ATTGCAC-TGACTGTTCTATTAT-TGATGCATTTATTAATTGTGCTGTTACATTTGTATTATATAATTTTCTTTGCTTAATTCTGCATGGTACCTTTTCA----------------GTGTC-----ATTTTCATCTTG----AGAGTC-TATGTTTTG---------------TATATTTTTCTTG--AGAATGA----------------------------------TGAAGCAATTCTTTCAGAAATTTCCTTCTGTTTTCTTGTGATAAATATTAATCCTGAATGTATTTCAT---- i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5443716 397 + 5549422 GTCAGAAAATTTCTGTCCCATTATGTCTTATTGTATTACATATACTTACATTTTCTCTTATTTATTTTATT---CACCGTTAAGT-AATTGTTAGCAGTAAACTGCTGGATCTTTATTAAC--TCATCTTT----CTAACCTTTT--ATTGCTGAGCTGCTTT-------TTCTTTACATCTTGTTTACTTTTT------------CTGTATTAGTGACTTGGTTTA-T--------------------------TGCATTTATTAATTATGATGTCATATTTGTAT--TAT---TTTCTTTCCTTAATTCGGCATGGTACCTTTTTA----------------GTATC-----CTTTTGATCTTG----AGAGTCTTATGTTTTGTATATTTTGTGTGTTTATATTTTTCTTG--GAAACGT----------------------------------TGAAGCAGTTCTTTCAGAACTTTTCT----TTTTCTTGTGCTAAATATTAATCATGCATGTATTTGAC---- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4586003 471 - 122678785 gttaagtctcttacagtttgtc---tccc-------------tcccttcacc---tatgatcc-tgttttg---tttcttaaattccacatatgag----------tgaaatcata-taactgtctttctctgattgacttatttcacttagcataatatcctagttccatccatggcattgcaaacgTGTTCTTCAAAGACTCTTATTTTTT----GTTTGATGCT-ACTGTTTCTGGGAGTTCTTTAATTTGATATAGCAAaagataaatctctatagtttatagtgcactaaatctttttctggaaatagagtgaaaccttttgatcaaatttaggtcttcatgtcaggaagtttctattatatctttaagta---tattttc---------------ttttattctgttgTCTGGATATGCGTAACAGTCATCTTTCAACCCAGGCGCCACAGTAAAGCAGTTCTTTCTGAAATTTTCTTCCATTTCC-TGTGACAAATATTAATCCTGAATGGGTTTTCTTCAT i canFam3.chr1 I 169 C 0 e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=105396.000000 s hg38.chr19_GL383574v1_alt 39085 9 + 155864 CTACCTTTT s panTro5.chr19 36107706 9 + 61309027 CTACCTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39853760 9 + 64411610 CTACCTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271500 9 - 8369475 CTACCTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866205 9 - 106955855 CTACCTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174749 9 + 53671032 CCACCTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627625 9 + 59248254 CCACCTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495413 9 - 13342542 CCACCTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426219 9 + 7714307 CCACCTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233458 9 + 50890351 CCACCTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857043 9 - 2385121 CCACCTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2292943 9 + 4274983 CCACCTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28526317 9 + 49145316 CTACttttt i calJac3.chr22 C 0 I 1160 s cebCap1.NW_016107633v1 1581522 9 - 2680843 CTACTTTTT i cebCap1.NW_016107633v1 I 154 C 0 s aotNan1.NW_018505377v1 332523 9 - 4471408 CTACttttt i aotNan1.NW_018505377v1 C 0 I 1089 s micMur3.chr22 3935812 9 - 30143674 GTACCTTTT i micMur3.chr22 C 0 I 417 s proCoq1.NW_012149263v1 530109 9 + 2501019 GTACCTTTT i proCoq1.NW_012149263v1 C 0 I 293 s otoGar3.GL873654 5444113 9 + 5549422 GTACCTTTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4586474 9 - 122678785 CTGTCTAGT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e saiBol1.JH378197 5367343 4405 + 8899380 I a score=52164.000000 s hg38.chr19_GL383574v1_alt 39094 6 + 155864 GAAGAC s panTro5.chr19 36107715 6 + 61309027 GAAGAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39853769 6 + 64411610 GAAGAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271509 6 - 8369475 GAAGAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866214 6 - 106955855 GAAGAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174758 6 + 53671032 GAAGAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627634 6 + 59248254 GAAGAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495422 6 - 13342542 GAAGAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426228 6 + 7714307 GAAGAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233467 6 + 50890351 GAAGAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857052 6 - 2385121 GAAGAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2292952 6 + 4274983 GAAGAC i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1581531 6 - 2680843 GAAAAC i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5444122 6 + 5549422 GAAAAT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4586483 6 - 122678785 GAATAC i canFam3.chr1 C 0 I 214 e proCoq1.NW_012149263v1 530118 293 + 2501019 I e micMur3.chr22 3935821 417 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e aotNan1.NW_018505377v1 332532 1089 - 4471408 I e saiBol1.JH378197 5367343 4405 + 8899380 I e calJac3.chr22 28526326 1160 + 49145316 I a score=157235.000000 s hg38.chr19_GL383574v1_alt 39100 26 + 155864 TGTGT----CCTATCAGGGCAAACTGCTGG s panTro5.chr19 36107721 26 + 61309027 TGTGT----CCTCTCAGGGCAAACTGCTGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39853775 26 + 64411610 TGTGT----CCTATCAGGGCAAACTGCTGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271515 26 - 8369475 TGTGT----CCTATCAGGGCAAACTGCTGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866220 30 - 106955855 TGTGTGCTCTCTGTCAGGGCAAACTGCTGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174764 30 + 53671032 TGTGTCCTCTCTGTCAGGGCAAACCGCTGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627640 30 + 59248254 TGTGTCCTCTCTGTCAGGGCAAACCGCTGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495428 30 - 13342542 TGTGTCCTCTCTGTCAGGGCAAACCGCTGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426234 30 + 7714307 TGCGTCCTCTCTGTCAGGGCAAACTGCTGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233473 30 + 50890351 TGTGTCCTCTCTGTCAGGGCAAACTGCTGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857058 30 - 2385121 TGTGTCCTCTCTGTCAGGGCAAACTGCTGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2292958 28 + 4274983 TGTGTC--CTCTGTCAGGGCAAACCGCTGG i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1581537 30 - 2680843 TGTGTCCTCTCTGTCAGGGCAAACTGCTGG i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5444128 11 + 5549422 TGGGtcctttc------------------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 530118 293 + 2501019 I e micMur3.chr22 3935821 417 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4586489 214 - 122678785 I e aotNan1.NW_018505377v1 332532 1089 - 4471408 I e saiBol1.JH378197 5367343 4405 + 8899380 I e calJac3.chr22 28526326 1160 + 49145316 I a score=40543.000000 s hg38.chr19_GL383574v1_alt 39126 6 + 155864 TAATGG s panTro5.chr19 36107747 6 + 61309027 TAATGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39853801 6 + 64411610 TGATGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271541 6 - 8369475 TAATGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866250 6 - 106955855 TAATGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174794 6 + 53671032 TAGTGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627670 6 + 59248254 TAGTGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495458 6 - 13342542 TAGTGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426264 6 + 7714307 TAGTGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233503 6 + 50890351 TAGTGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857088 6 - 2385121 TAGTGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2292986 6 + 4274983 TAGTGG i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5371748 6 + 8899380 taataa i saiBol1.JH378197 I 4405 I 1 s cebCap1.NW_016107633v1 1581567 6 - 2680843 TAATGG i cebCap1.NW_016107633v1 C 0 I 625 e proCoq1.NW_012149263v1 530118 293 + 2501019 I e micMur3.chr22 3935821 417 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5444139 0 + 5549422 C e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4586489 214 - 122678785 I e aotNan1.NW_018505377v1 332532 1089 - 4471408 I e calJac3.chr22 28526326 1160 + 49145316 I a score=13578.000000 s hg38.chr19_GL383574v1_alt 39132 3 + 155864 AAA s panTro5.chr19 36107753 3 + 61309027 GAa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39853807 3 + 64411610 AAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271547 3 - 8369475 AAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866256 3 - 106955855 AAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174800 3 + 53671032 AAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627676 3 + 59248254 AAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495464 3 - 13342542 AAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426270 3 + 7714307 AAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233509 3 + 50890351 AAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857094 3 - 2385121 AAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2292992 3 + 4274983 AAA i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5371755 2 + 8899380 aa- i saiBol1.JH378197 I 1 I 1 e proCoq1.NW_012149263v1 530118 293 + 2501019 I e micMur3.chr22 3935821 417 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5444139 0 + 5549422 C e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4586489 214 - 122678785 I e aotNan1.NW_018505377v1 332532 1089 - 4471408 I e cebCap1.NW_016107633v1 1581573 625 - 2680843 I e calJac3.chr22 28526326 1160 + 49145316 I a score=11660.000000 s hg38.chr19_GL383574v1_alt 39135 9 + 155864 AAAAAACAA s panTro5.chr19 36107756 8 + 61309027 aataaat-a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39853810 8 + 64411610 AAAAACA-A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271550 8 - 8369475 AAAAACA-A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866259 7 - 106955855 AA-AACA-A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174803 7 + 53671032 AA-AACA-G i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627679 7 + 59248254 AA-AACA-G i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495467 7 - 13342542 AA-AACA-G i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426273 7 + 7714307 AA-AACA-G i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233512 7 + 50890351 AA-AACA-G i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857097 7 - 2385121 AA-AACA-G i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2292995 7 + 4274983 AA-AACA-A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527486 8 + 49145316 aaTAATA-G i calJac3.chr22 I 1160 C 0 s saiBol1.JH378197 5371758 8 + 8899380 agtaata-a i saiBol1.JH378197 I 1 I 1 e proCoq1.NW_012149263v1 530118 293 + 2501019 I e micMur3.chr22 3935821 417 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5444139 0 + 5549422 C e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4586489 214 - 122678785 I e aotNan1.NW_018505377v1 332532 1089 - 4471408 I e cebCap1.NW_016107633v1 1581573 625 - 2680843 I a score=290958.000000 s hg38.chr19_GL383574v1_alt 39144 33 + 155864 AATAAGTAAATGAAGACCGTGTCCTCTTTGATT----- s panTro5.chr19 36107764 33 + 61309027 aataaataaatgaaGACCGTGTCCTCTTTGATT----- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39853818 33 + 64411610 AATAAATAAATGAAGACCGTGTCCTCTTTGATT----- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271558 33 - 8369475 AATAAGTAAATGAAGACCGTGTCCTCTTTGATT----- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866266 33 - 106955855 AATAAGCAAATGAAGACCGTGTCCTCTTTGATT----- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174810 33 + 53671032 AATAAGCAAATGAAGACCGTGTCCTCTTTGATT----- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627686 33 + 59248254 AATAAGCAAATGAAGACCGTGTCCTCTTTGATT----- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495474 33 - 13342542 AATAAGCAAATGAAGACCGTGTCCTCTTTGATT----- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426280 33 + 7714307 AATAAGCAAATGAAGACCGTGTCCTCTTTGAtt----- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233519 33 + 50890351 AATAAGCAAATGAAGACCGTGTCCTCTTTGAtt----- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857104 33 - 2385121 AATAAGCAAATGAAGACCATGTCCTCTTTGATT----- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293002 33 + 4274983 AATAAGCAAATGAAGACCGTGTCCTCTTTGATT----- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527494 33 + 49145316 AAGAAGCAAATGAAGACCATGTCTTCTTTGAtt----- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5371767 33 + 8899380 aataaGCAAATGAAGACTGTGTCCActttgatt----- i saiBol1.JH378197 I 1 C 0 s cebCap1.NW_016107633v1 1582198 33 - 2680843 AATAAGCAAATGAAGACCGTGTCCTCTTTGAtt----- i cebCap1.NW_016107633v1 I 625 I 141 s otoGar3.GL873654 5444139 27 + 5549422 ------tcattg-----tctctcttttttcgtttcttt i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 530118 293 + 2501019 I e micMur3.chr22 3935821 417 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4586489 214 - 122678785 I e aotNan1.NW_018505377v1 332532 1089 - 4471408 I a score=405696.000000 s hg38.chr19_GL383574v1_alt 39177 69 + 155864 -----CTTC----TCTTCTTCTTTACTGCC-TTTTTTCT--TTATTTTGATAC-----------ACCTTTTTCTTTCCTTC-----------CATC--ATTGCCT s panTro5.chr19 36107797 69 + 61309027 -----CTTC----TCTTCTTCTTTACTGCC-TTTTTTCT--TTATTTTGATAC-----------ACCTTTTTCTTTCCTTC-----------CATC--ATTGCCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39853851 69 + 64411610 -----CTTC----TCTTCTTCTTTACTGCC-TTTTTTCT--TTATTTTGATAC-----------ACCTTTTTCTTTCCTTC-----------CATC--ATTGCCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271591 69 - 8369475 -----CTTC----TCTTCTTCTTTACTGCC-TTTTTTCT--TTATTTTGATAC-----------ATCTTTTTCTTTCCTTC-----------CATC--ATTGCCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866299 69 - 106955855 -----CTTC----TCTTCTTCTTTCCTGCC-TTTTTTCT--TTATTTTGATAT-----------ACCTTTTTCCTTCCTTC-----------CATC--ATTGCCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174843 66 + 53671032 -----CTTC-------TCTTCTTTCCTGCC-TTTTTTCT--TTATTTTGATAT-----------ACCTTTTTCTTTCCTTC-----------CATC--ATTGCCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627719 66 + 59248254 -----CTTC-------TCTTCTTTCCTGCC-TTTTTTCT--TTATTTTGATAT-----------ACCTTTTTCTTTCCTTC-----------CATC--ATTGCCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495507 66 - 13342542 -----CTTC-------TCTTCTTTCCTGCC-TTTTTTCT--TTATTTTGATAT-----------ACCTTTTTCTTTCCTTC-----------CATC--ATTACCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426313 66 + 7714307 -----cttc-------ccttctttcctgcc-ttttttct--ttattttgatat-----------acctttttctttccttc-----------catc--attgcct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233552 67 + 50890351 -----cttc-------ccttctttcctgcctttttttct--ttattttgatat-----------acctttttctttccttc-----------catc--attgcct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857137 66 - 2385121 -----CTTC-------CCTTCTTTCCTGCC-TTTTTTCT--TTATTTTGATAT-----------ACCTTTTTCTTTCCTTC-----------CATC--ATTGCCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293035 66 + 4274983 -----CTTC-------TCTTCTTTCCTGAC-TTTTTTCT--TTATTTTGATAT-----------ACCTTTTTCTTTCCTTC-----------CATC--ATTGCCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527527 44 + 49145316 -----cttc-------tcttctcctttgcc-tttttact-----------------------------------tttcttc-----------catc--attgcct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5371800 43 + 8899380 -----cttc-------tcttctcctttgcc-tttttact-----------------------------------tttctt------------catc--attgcct i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5444166 104 + 5549422 cctttcttcattgtgttcatctctctttcc-tctttttttcttattttGGTGTTTTTTTCTGTAAAAtttttcttttctttttgagacagagcctcaaactgtca i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 530118 293 + 2501019 I e micMur3.chr22 3935821 417 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4586489 214 - 122678785 I e aotNan1.NW_018505377v1 332532 1089 - 4471408 I e cebCap1.NW_016107633v1 1582231 141 - 2680843 I a score=54047.000000 s hg38.chr19_GL383574v1_alt 39246 11 + 155864 CCCT------------------------------CCTTTCC s panTro5.chr19 36107866 11 + 61309027 CCCT------------------------------CCTTTCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39853920 11 + 64411610 CCCT------------------------------CCTTTCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271660 11 - 8369475 CCCT------------------------------CCTTTCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866368 11 - 106955855 CCCT------------------------------CCTTTCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174909 11 + 53671032 CCCT------------------------------CCTTTCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627785 11 + 59248254 CCCT------------------------------CCTTTCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495573 11 - 13342542 CCCT------------------------------CCTTTCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426379 11 + 7714307 ccct------------------------------cctttcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233619 11 + 50890351 ccct------------------------------cctttcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857203 11 - 2385121 CCCT------------------------------CCTTTCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293101 11 + 4274983 CCTT------------------------------CCTTTCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527571 8 + 49145316 ctct---------------------------------gttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5371843 7 + 8899380 cttt----------------------------------ttc i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5444270 41 + 5549422 ccctgggtagagtgcatcacacagctcacagcaacctctaa i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4586703 11 - 122678785 ccct------------------------------ccgtcac i canFam3.chr1 I 214 C 0 e proCoq1.NW_012149263v1 530118 293 + 2501019 I e micMur3.chr22 3935821 417 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e aotNan1.NW_018505377v1 332532 1089 - 4471408 I e cebCap1.NW_016107633v1 1582231 141 - 2680843 I a score=274930.000000 s hg38.chr19_GL383574v1_alt 39257 33 + 155864 ------------CTCTT---TTC------TTCCCTTCTTTCCATCTTTCCTGTA s panTro5.chr19 36107877 33 + 61309027 ------------CTCTT---TTC------TTCCCTTCTTTCCATCTTTCCTGTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39853931 33 + 64411610 ------------CTCTT---TTC------TTCCCTTCTTTCCATCTTTCCTGTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271671 33 - 8369475 ------------CTCTT---TTC------TTCCCTTCTTTCCATCTTTCCTGTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866379 33 - 106955855 ------------CTCTT---TTC------TTCCCTTCTTTCCATCTTACCTGTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174920 33 + 53671032 ------------CTCTT---TTC------TTCCCTTCTTTCCATCTTTCCTGTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627796 33 + 59248254 ------------CTCTT---TTC------TTCCCTTCTTTCCATCTTTCCTGTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495584 33 - 13342542 ------------CTCTT---TTC------TTCCCTTCTTTCCATCTTTCCTGTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426390 33 + 7714307 ------------ctctt---ttc------ttcccttctttccatctttcctGTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233630 33 + 50890351 ------------ctctt---ttc------ttcccttctttccatctttcctGTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857214 33 - 2385121 ------------CTCTT---TTC------TTCCCTTCTTTCCATCTTTCCTGTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293112 33 + 4274983 ------------CTCTT---TTC------TTCCCTTCTTTCCATCTTTCCTGTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527579 24 + 49145316 ------------ttctt---ttc------ttccctt---------tttactgta i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5371850 29 + 8899380 ------------ttctt---ttc------ttcccttatt----tctttcctGTA i saiBol1.JH378197 C 0 C 0 s micMur3.chr22 3936238 33 - 30143674 ------------CTCTT---TTC------TTCCCTTCTTTCTGTTTGTCCTGTA i micMur3.chr22 I 417 C 0 s otoGar3.GL873654 5444311 42 + 5549422 ------------ctcctaggctcaagcaattctcctgcctccgcctcccaagta i otoGar3.GL873654 C 0 I 151 s canFam3.chr1 4586714 45 - 122678785 cgcttgtgtgcactctc---tct------cacaCTCTGCTTGCTCTCTCCAATA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 530118 293 + 2501019 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e aotNan1.NW_018505377v1 332532 1089 - 4471408 I e cebCap1.NW_016107633v1 1582231 141 - 2680843 I a score=88944.000000 s hg38.chr19_GL383574v1_alt 39290 10 + 155864 AAATTTTTCT s panTro5.chr19 36107910 10 + 61309027 AAATTTTTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39853964 10 + 64411610 AAATTTTTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271704 10 - 8369475 AAATTTTTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866412 10 - 106955855 AAATTTTTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174953 10 + 53671032 AAATTTATCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627829 10 + 59248254 AAATTTATCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495617 10 - 13342542 AAATTTATCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426423 10 + 7714307 AAATTTGTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233663 10 + 50890351 AAATTTGTCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857247 10 - 2385121 AAATTTGTCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293145 10 + 4274983 AAATTTGTCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527603 10 + 49145316 aaatttttct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5371879 10 + 8899380 AAATTGTTCT i saiBol1.JH378197 C 0 C 0 s micMur3.chr22 3936271 10 - 30143674 AAATTTTTCT i micMur3.chr22 C 0 I 584 s otoGar3.GL873654 5444504 10 + 5549422 AAATTTTTCT i otoGar3.GL873654 I 151 C 0 s canFam3.chr1 4586759 6 - 122678785 AGACTT---- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 530118 293 + 2501019 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e aotNan1.NW_018505377v1 332532 1089 - 4471408 I e cebCap1.NW_016107633v1 1582231 141 - 2680843 I a score=223095.000000 s hg38.chr19_GL383574v1_alt 39300 30 + 155864 TGATTCCCTGATTTTTCTACTCTTTTTTTC s panTro5.chr19 36107920 30 + 61309027 TGATTCCCTGATTTTTCTACTCTTTTTTTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39853974 30 + 64411610 TGATTCCCTGATTTTTCTACTCTTTTTTTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271714 30 - 8369475 TGATTCCCTGATTTTTCTACTCTTTTTTTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866422 30 - 106955855 TGATTCCCTGAGTTTTCTACTCTTTTTTTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174963 30 + 53671032 TGATTCCCTGATGTTTCTACTTTTTTTTTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627839 30 + 59248254 TGATTCCCTGATGTTTCTACTTTTTTTTTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495627 30 - 13342542 TGATTCCCTGATGTTTCTACTTTTTTTTTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426433 30 + 7714307 TGATTCCCTGATGTTTCTACTCTTTTTTTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233673 30 + 50890351 TGATTCCCTGATGTTTCTACTCTTTTTTTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857257 30 - 2385121 TGATTCCCTGATGTTTCTACTCTTTTTTTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293155 30 + 4274983 TGATTCCCTGATGTTTCTACTCTTTTTTTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527613 30 + 49145316 tgattctatgatttttcaactctttttttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5371889 26 + 8899380 TGATTCCATGATTTTTTAAC----TTTTTT i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5444514 25 + 5549422 -TATTCTATG--CTTTCTAC--TTTTTCTC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4586765 22 - 122678785 --------TGACTTTTCCTCCCCCTACTTC i canFam3.chr1 C 0 I 134 e proCoq1.NW_012149263v1 530118 293 + 2501019 I e micMur3.chr22 3936281 584 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e aotNan1.NW_018505377v1 332532 1089 - 4471408 I e cebCap1.NW_016107633v1 1582231 141 - 2680843 I a score=169470.000000 s hg38.chr19_GL383574v1_alt 39330 32 + 155864 TTTAGTAGGT-CCTTTCAGTACCTGCTGCTTGC s panTro5.chr19 36107950 32 + 61309027 TTTAGTAGGT-CCTTTCAGTACCTGCTGCTTGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854004 32 + 64411610 TTTAGTAGGT-CCTTTCAGTACCTGCTGCTTGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271744 32 - 8369475 TTTAGTAGGT-CCTTTCAGTACCTGCTGCTTGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866452 32 - 106955855 TTTAGTAGGT-CCTTTCAGTAACTGCTGCTTGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30174993 32 + 53671032 CTTAGTAGGT-CCTTTCAGTATCTGCTGCTTGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627869 32 + 59248254 CTTAGTAGGT-CCTTTCAGTATCTGCTGCTTGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495657 32 - 13342542 CTTAGTAGGT-CCTTTCAGTATCTGCTGCTTGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426463 32 + 7714307 CTTAGTAGGT-CCTTTCAGTATCTGCTGCTTGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233703 32 + 50890351 CTTAGTAGGT-CCTTTCAGTATCTGCTGCTTGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857287 32 - 2385121 CTTGGTAGGT-CCTTTCAGTATCTGCTGCTTGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293185 32 + 4274983 CTTAGTAGGT-CCTTTCAGTATCTGCTGCTTGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527643 9 + 49145316 ctt-----------------------tttttG- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5371915 9 + 8899380 CTT-----------------------TTTTTG- i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5444539 33 + 5549422 CTTACCTTATACCTTTCAGTGCCTGCTACTTGC i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 530118 293 + 2501019 I e micMur3.chr22 3936281 584 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4586787 134 - 122678785 I e aotNan1.NW_018505377v1 332532 1089 - 4471408 I e cebCap1.NW_016107633v1 1582231 141 - 2680843 I a score=749903.000000 s hg38.chr19_GL383574v1_alt 39362 83 + 155864 CAAAACGTGAAATGCAGATTCTCTTTTTACTTGACTCTGAATTCACCTGGCT------A----------AGCTCTGTTAGGCCTTAGGAAGCTTAATAG s panTro5.chr19 36107982 83 + 61309027 CAAAACGTGAAATGCAGATTCTCTTTTTACTTCACTCTGAATTCACCTGGCT------A----------AGCTCTGTTAGGCCTTAGGAAGCTTAATAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854036 83 + 64411610 CAAAACGTGAAATGCAGATTCTCTTTTTACTTCACTCTGAATTCACCTGGCT------A----------AGCTCTGTTAGGCCTTAGGAAGCTTAATAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271776 83 - 8369475 CAAAACGTGAAATGCAGGTTCTCTTTTTACTTCACTCTGAATTCACCTGGCT------A----------AGCTCTGTTAGGCCTTAGGAAGCTTAATAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866484 82 - 106955855 CAAAACGTGAAATGCAGATTCTC-TTTTACTTCACTCTGAATTCACCTGGCT------A----------AGCTCTATTAGGCCTTAGGAAGCTTAATAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30175025 82 + 53671032 GAAAACGTGAAATGCAGATTCTC-TTTTACTTCACTCTGAGTTCACCTGGCT------A----------AGCTCTATTAGGCCTTAGGAAGCTTAATAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627901 82 + 59248254 GAAAACGTGAAATGCAGATTCTC-TTTTACTTCACTCTGAGTTCAGCTGGCT------A----------AGCTCTATTAGGCCTTAGGAAGCTTAATAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495689 82 - 13342542 GAAAACGTGAAATGCAGATTCTC-TTTTACTTCACTCTGAGTTCACCTGGCT------A----------AGCTCTATTAGGCCTTAGGAAGCTTAATAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426495 82 + 7714307 GAAAACGTGAAATGCAGATTCTC-TTTTACTTCACTCTGAATTCACCTGGCT------A----------AGCTCTATTAGGCCTTAGGAAGTTTAATAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233735 82 + 50890351 GAAAACGTGAAATGCAGATTCTC-TTTTACTTCGCTCTGAATTCACCTGGCT------A----------AGCTCTATTAGGCCTTAGGAAGCTTAATAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857319 82 - 2385121 GAAAACGTGAAATGCAGATTCTC-TTTTACTTCACTCTGAATTCACCTGGCT------A----------AGCTCTATTAAGCCTTAGGAAGCTTAATAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293217 82 + 4274983 GAAAACGTGAAATGCAGATTCTC-TTTTACTTCAGTCTGAATTCACCTGGCT------A----------AGTTCTATTAGGCCTTAGGAAGCTTAATAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527652 88 + 49145316 CAAAAGATGAAGTGCAAATTCTC-TTTTACTTCACTCTCAATTTACCTGGCTTCTCTCT----------CTCTCTATTAGGCCTTAGGAAACCTAATAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5371924 82 + 8899380 CAAAACATGAAGTGCAAATTCTC-TTTTACTTCACTCTGAATTTACCTGGCT------A----------TGCTCTACTAGGCCTTAGGAAGCCTAATAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582372 82 - 2680843 CAAAACATGAAGTGCAAATTCTC-TTTTACTTCACTCTGAATTTACCTGGCT------G----------TGCTCTATTAGGCCTTAGGAAGCCTAATAG i cebCap1.NW_016107633v1 I 141 C 0 s otoGar3.GL873654 5444572 90 + 5549422 CTAAATATGGAATGCAGATTCTC-TTGGAGTT--CTTTGAGTTCACCTGGCT------ATAGTGTGAGTGGTTTCGTTAGGCCTTGGAAAACCTAATAG i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 530118 293 + 2501019 I e micMur3.chr22 3936281 584 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4586787 134 - 122678785 I e aotNan1.NW_018505377v1 332532 1089 - 4471408 I a score=170357.000000 s hg38.chr19_GL383574v1_alt 39445 22 + 155864 AGCTTCTCTA--ATTTTGTAG---AAG s panTro5.chr19 36108065 22 + 61309027 AGCTTCTCTA--ATTTTGTAG---AAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854119 22 + 64411610 AGCTTCTCTA--ATTTTGTAG---AAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271859 22 - 8369475 AGCTTCTCTA--ATTTTGTAG---AAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866566 22 - 106955855 AGCTTGTCTA--ATTTTGTGG---AAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30175107 22 + 53671032 AGCTTCTCTA--GTTTTGTAG---AAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34627983 22 + 59248254 AGCTTCTCTA--GTTTTGTAG---AAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495771 22 - 13342542 AGCTTCTCTA--GTTTTGTAG---AAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426577 22 + 7714307 AGCTTCTCTA--GTTTTGTAG---AAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233817 22 + 50890351 AGCTTCTCTA--GTTTTGTAG---AAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857401 22 - 2385121 AGCTTCTCTA--GTTGTGTAG---AAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293299 22 + 4274983 AGCTTCTCTA--GTTTTGTAG---AAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527740 19 + 49145316 AGCCTCTCTA--ATTTTGTAG------ i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372006 19 + 8899380 AGCTTCTCTA--ATTTTGTAG------ i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582454 22 - 2680843 AGCATCTCTA--ATTTTGTAGACG--- i cebCap1.NW_016107633v1 C 0 I 22 s otoGar3.GL873654 5444662 21 + 5549422 AGCTTCTCTATGATTTTGTAG------ i otoGar3.GL873654 C 0 I 1 s canFam3.chr1 4586921 16 - 122678785 AGCCTTCCTG--tctttg--------- i canFam3.chr1 I 134 C 0 e proCoq1.NW_012149263v1 530118 293 + 2501019 I e micMur3.chr22 3936281 584 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e aotNan1.NW_018505377v1 332532 1089 - 4471408 I a score=8281.000000 s hg38.chr19_GL383574v1_alt 39467 1 + 155864 A s panTro5.chr19 36108087 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854141 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271881 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866588 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30175129 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628005 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495793 1 - 13342542 A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426599 1 + 7714307 A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233839 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857423 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293321 1 + 4274983 A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527759 1 + 49145316 A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372025 1 + 8899380 A i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 530118 293 + 2501019 I e micMur3.chr22 3936281 584 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5444683 1 + 5549422 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4586937 0 - 122678785 C e aotNan1.NW_018505377v1 332532 1089 - 4471408 I e cebCap1.NW_016107633v1 1582476 22 - 2680843 I a score=209846.000000 s hg38.chr19_GL383574v1_alt 39468 28 + 155864 AGGGCCTTTGAC--TTTTTCCCTCTCTGCT s panTro5.chr19 36108088 28 + 61309027 AGGGCCTTTGAC--TTTTTCCCTCTCTGCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854142 28 + 64411610 AGGGCCTTTGAC--TTTTTCCCTCTCTGCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271882 28 - 8369475 AGGGCCTTTGAC--TTTTTCCCTCTCTGCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866589 28 - 106955855 AGGGCCTTTGAC--TTTTTCCCCCTCTGCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30175130 28 + 53671032 AGGGCCTTTGAC--TCTTGCCCCCTCTGCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628006 28 + 59248254 AGGGCCTTTGAC--TCTTGCCCCCTCTGCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495794 28 - 13342542 AGGGCCTTTGAC--TCTTGCCCCCTCTGCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426600 28 + 7714307 AGGGCCTTTGAC--TCTTGTCCCCTCTGCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233840 28 + 50890351 AGGGCCTTTGAC--TCTTGCCCCCTCTGCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857424 28 - 2385121 AGGGCCTTTGAC--TCTTGTCCCCTCTGCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293322 28 + 4274983 AGGGCCTTTGAC--TCTTGCCCACTCTGCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527760 24 + 49145316 TGGACCTTTGAC------AAACCCTTTGTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372026 24 + 8899380 CAGACCTTTGAC------AAACCTTTTGTG i saiBol1.JH378197 C 0 C 0 s proCoq1.NW_012149263v1 530411 30 + 2501019 AGGGCCTTTGACTTTTTTTCTTCCTTTGCT i proCoq1.NW_012149263v1 I 293 C 0 s otoGar3.GL873654 5444684 29 + 5549422 TGGGCCTTTGAC-ATTTTTATCCCTCTACT i otoGar3.GL873654 I 1 C 0 s canFam3.chr1 4586937 23 - 122678785 -----cttttac--ttttcttttcttttct i canFam3.chr1 C 0 C 0 e micMur3.chr22 3936281 584 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e aotNan1.NW_018505377v1 332532 1089 - 4471408 I e cebCap1.NW_016107633v1 1582476 22 - 2680843 I a score=30303.000000 s hg38.chr19_GL383574v1_alt 39496 2 + 155864 TC s panTro5.chr19 36108116 2 + 61309027 TC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854170 2 + 64411610 TC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271910 2 - 8369475 TC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866617 2 - 106955855 TC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30175158 2 + 53671032 TC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628034 2 + 59248254 TC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495822 2 - 13342542 TC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426628 2 + 7714307 TC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233868 2 + 50890351 TC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857452 2 - 2385121 TC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293350 2 + 4274983 TC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527784 2 + 49145316 TC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372050 2 + 8899380 TC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582498 2 - 2680843 TC i cebCap1.NW_016107633v1 I 22 C 0 s aotNan1.NW_018505377v1 333621 2 - 4471408 TC i aotNan1.NW_018505377v1 I 1089 C 0 s proCoq1.NW_012149263v1 530441 2 + 2501019 TC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5444713 2 + 5549422 TC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4586960 2 - 122678785 tt i canFam3.chr1 C 0 I 137 e micMur3.chr22 3936281 584 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I a score=395281.000000 s hg38.chr19_GL383574v1_alt 39498 34 + 155864 AGGATGATCTCATCTGCTACTTTGGAAGCATGAG s panTro5.chr19 36108118 34 + 61309027 AGGATGATCTCATCTGCTACTTTGGAAGCATGAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854172 34 + 64411610 AGGATGATCTCATCTGCTACTTTGGAAGCATGAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271912 34 - 8369475 AGGATGATCTCATCTGCTACTTTGGAAGCATGAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866619 34 - 106955855 AGGATGATCTCATTTGCTACTTTGGAAGCATGAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30175160 34 + 53671032 AGGATGATCTCATCTGCTACTTTGGAAGCGTGAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628036 34 + 59248254 AGGATGATCTCATCTGCTACTTTGGAAGCGTGAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495824 34 - 13342542 AGGATGATCTCATCTGCTACTTTGGAAGCGTGAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426630 34 + 7714307 AGGATGATCTCATCTGCTACTTTGGAAGCGTGAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233870 34 + 50890351 AGGGTGATCTCATCCGCTACTTTGGAAGCGTGAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857454 34 - 2385121 AGGATGATCTCATCTGCTACTTTGGAAGCGTGAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293352 34 + 4274983 AGGATGATCTCATCTGCTACTTTGGAAGTGTGAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527786 34 + 49145316 AGGATGAGCTCATCTGCTACTTTGGAAGCGTGAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372052 34 + 8899380 AGGATGAGCTCATCTGCTACTTTGGAATTGTGAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582500 34 - 2680843 AGGATGAGCTCATCTGCTACTTTGGAAGCATGAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 333623 34 - 4471408 AGGATGAGCTCATCTGCTTCTTTGGAAGCATGAG i aotNan1.NW_018505377v1 C 0 I 271 s proCoq1.NW_012149263v1 530443 34 + 2501019 AGGATCAGCTAATCTGCTACTTTGGAGATGTGGG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5444715 33 + 5549422 AAGATTAACTAATCTCCTTCTTTGTGGG-GGGTG i otoGar3.GL873654 C 0 C 0 e micMur3.chr22 3936281 584 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4586962 137 - 122678785 I a score=680797.000000 s hg38.chr19_GL383574v1_alt 39532 72 + 155864 ACTTTATTTGTTTTGATGGTACTGAGGTTAGGGGT-GAGATTGATTTATTTGTAA-----TTAGTCCTTTCTCCTCCT s panTro5.chr19 36108152 72 + 61309027 ACTTTATTTGTTTTGATGGTACTGAGGTTAGGGGT-GAGATTGATTTATTTGTAA-----TTAGTCCTTTCTCCTCCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854206 72 + 64411610 ACTTTATTTGTTTTGATGGTACTGAGGTTAGGGGT-GAGATTGATTTATTTGTAA-----TTAGTCCTTTCTCCTCCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6271946 67 - 8369475 AC----TTTGTTTTGATGGTACTGAGGTT-GGGGT-GAGATTGATTTATTTGTAA-----TTAGTCCTTTCTCCTCCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866653 72 - 106955855 ACTTTATTCGTTGTGATGGTACTGAGGTTAGGGGT-GAGATTGATTTATTTGTAA-----TTAGTCCTTTCTCCTCCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30175194 72 + 53671032 ACTTTATTCGCTGTGATGGTACTGAGGTTAGGGGT-GAGATTGATTTATTTGTAA-----TTAGTCCTTTCTCCTCCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628070 72 + 59248254 ACTTTATTCGCTGTGATGGTACTGAGGTTAGGGGT-GAGATTGATTTATTTGTAA-----TTAGTCCTTTCTCCTCCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495858 72 - 13342542 ACTTTATTCGCTGTGATGGTACTGAGGTTAGGGGT-GAGATTGATTTATTTGTAA-----TTAGTCCTTTCTCCTCCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426664 72 + 7714307 ACTTTATTCGCTGTGATGGTACTGAGGTTAGGGGT-GAGATTGATTTATTTGTAA-----TTAGTCCTTTCTCCTCCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233904 72 + 50890351 ACTTTATTCGCTGTGATGGTACTGAGGTTAGGGGT-GAGATTGATTTATTTGTAA-----TTAGTTCTTTCTCCTCCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857488 72 - 2385121 ACTTTATTCGCTGTGATGGTACTGAGGTTAGGGGT-GAGATTGATTTATTTGTAA-----TTAGTCCTTTCTCCTCCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293386 64 + 4274983 ACTTTATTCGTTGTGAT--------ACTTAGGGGT-GAGACTGATTTATTTGTAA-----TTAGTCCTTTCTCCTCCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527820 73 + 49145316 ACTTTATTTGATGTGATCATACTGAGGTTAGGGGT-GAGATTGATTTATTTGTAG-TTTCTTAGTCCTTT---CTCCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372086 73 + 8899380 ACTTTATTTAATGTGATGGTACTGAGGTTAGGTGT-GAGATTGATTTATTTGTAA-TTTCTTAGTCCTTT---CTCCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582534 73 - 2680843 ACTTTATTTGATGTGATGGTACTGAGGTTAGGCAT-GAGACTGATTTATTTGTAA-TTTCTTAGTCCTTT---CTCCT i cebCap1.NW_016107633v1 C 0 C 0 s proCoq1.NW_012149263v1 530477 78 + 2501019 ACTTTATTTGTTGTGGTGGTGCTGAGGCTGGGGGGTAAGATTGATTGATTAGTAATTTTCTTAGTCCTTTCTCTTCTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5444748 71 + 5549422 ACTTTATTTGTTGTGGTGGTGCTGAGGTTGGAGTG-AAGATTAATGTATTTGTAATTTTCTTAGTCCTTTCT------ i otoGar3.GL873654 C 0 C 0 e micMur3.chr22 3936281 584 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e canFam3.chr1 4586962 137 - 122678785 I e aotNan1.NW_018505377v1 333657 271 - 4471408 I a score=894885.000000 s hg38.chr19_GL383574v1_alt 39604 82 + 155864 TATCCTTCCTTTTGGATAAAGGTAAAAA-TATAAAA---------TCCTCCTG-CCTGCTAAAGTACTGTTTGGCCATCA-GAGAAAGGGAGCT- s panTro5.chr19 36108224 82 + 61309027 TATCCTTCCTTTTGGATAAAGGTAAAAA-TATAAAA---------TCCTCCTG-CCTGCTAAAGTACTGTTTGGCCATCA-GAGAAAGGGAGCT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854278 82 + 64411610 CATCCTTCCTTTTGGATAAAGGTAAAAA-TATAAAA---------TCCTCCTG-CCTGCTAAAGTACTGTTTGGCCATCA-GAGAAAGGGAGCT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272013 82 - 8369475 TATCCTTCCTTTTGGATAAAGGTAAAAA-TATAAAA---------TCCTCCTG-CCTGCTAAAGTACTGTTTGGCCATCA-GAGAAAGGGAGCT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866725 82 - 106955855 TATCATTCCTTTTGGATAAAAGTAAAAA-TATAAAA---------TCCTCCTG-CCTGCTAAAGTACTGTTTGGCCATCA-GAGAAAGGGAGCT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30175266 82 + 53671032 TACCCTTCCTTTTGGATAAAGGTAAAAA-TATAAAA---------TCCTCCTG-CCTGCTAAAGTACTGTTTGGCCACCA-GAGAAGGGGAGTT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628142 82 + 59248254 TACCCTTCCTTTTGGATAAAGGTAAAAA-TATAAAA---------TCCTCCTG-CCTGCTAAAGTACTGTTTGGCCACCA-GAGAAGGGGAGTT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4495930 82 - 13342542 TACCCTTCCTTTTGGATAAAGGTAAAAA-TATAAAA---------TCCTCCTG-CCTGCTAAAGTACTGTTTGGCCACCA-GAGAAGGGGAGTT- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426736 82 + 7714307 TACCCTTCCTTTTGGATAAAGGTAAAAA-TATAAAA---------TCCTCCTG-CCTGCTAAAGTACTGTTTGGCCACCA-GAGAAGGGGAGTT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29233976 82 + 50890351 TACCCTTCCTTTTGGATAAAGGTAAAAA-TATAAAA---------TCCTCCTG-CCTGCTAAAGTACTGTTTGGCCACCA-GAGAAGGGGAGTT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857560 82 - 2385121 TACCCTTCCTTTTGGATAAAGGTAAAAA-TATAAAA---------TCCTCCTG-CCTGCTAAAGTACTGTTTGGCCACCA-GAGAAGGGGAGTT- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293450 81 + 4274983 TACCCTTCCTTTTGGATAAAGGTAAAAA-TATAAAA---------TCCTCCTG-CCTGCTAAAGTACTGTTT-GCCACCA-GAGAAGGGGAGTT- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527893 82 + 49145316 TATCCTTCCTTTTGGATAAAGGTCAAAA-TATAAAA---------TCTTCCTA-CCTGCTTAAGTACTCTTTGACCATCA-GAGAAAGGGAGCT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372159 82 + 8899380 TATCTTTCCTTTTGGATAAAGGTCAAAA-TATAAAA---------TCTTCCTA-CCTGCTTAAGTACTATTTGACCATCA-GAGAAAGGGAGCT- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582607 82 - 2680843 TATCCTTCCTTTTGAATAAAGGTCAAAA-TATAAAA---------TCTTCCTA-CCTGCTTAAGTACTATCTGACCATCA-GAGAAAGGGAGCT- i cebCap1.NW_016107633v1 C 0 C 0 s proCoq1.NW_012149263v1 530555 81 + 2501019 TAGATTTCCTTTTGTATAAAGGTCAAAAGTATAAAA------------TCCTG-CCTGCTAAAATACTGCTTGGCCATCAGGAGAAGGGGAGCT- i proCoq1.NW_012149263v1 C 0 I 113 s otoGar3.GL873654 5444819 77 + 5549422 ----TTCCCATTTGTATAAAGATCAAAAGTATAAAA------------TCCTG-CCTGCTAAAATACTGTTTGGCCAGCAGGAGATGGGGAACT- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4587099 93 - 122678785 TATCCTTCCTTTCATATAAAGGACAAAA-TAAGAACCTTGTCACTTACTCCTGCCCTTATATAGTACTCTTTGGCCACTG-GGGGAAGAGAAAAT i canFam3.chr1 I 137 C 0 e micMur3.chr22 3936281 584 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e aotNan1.NW_018505377v1 333657 271 - 4471408 I a score=511521.000000 s hg38.chr19_GL383574v1_alt 39686 49 + 155864 TCAGGTAGGGCATTCCGCA----------------------GT---CCCTGTC-CCCATCTTAGCAAGTTGAAGA s panTro5.chr19 36108306 49 + 61309027 TCAGGTAGGGCATTCCGCA----------------------GT---CCCTGTT-CCCATCTTAGCAAGTTGAAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854360 49 + 64411610 TCAGGTAGGGCATTCCACA----------------------GT---CCCTGTT-CCCATCTTAGCAAGTTGAAGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272095 49 - 8369475 TCAGGTAGGGCATTCCGCA----------------------GT---CCCTGTC-CCCATCTTAGCAAGTTGAAGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63866807 70 - 106955855 TCAGGTAGGGCATTCCGCATTTTTTTACTCATCACACCTGTGT---CCCTATC-CCCTCCTTA-CAAGCTGAAGA i nomLeu3.chr10 C 0 I 125 s rheMac8.chr19 30175348 71 + 53671032 TCAGGTAGGGCGTTCCGCATTTTTTTCCTCATCACACCTGTGT---CCCTGTC-CCCATCTTAGCAAGTTGAAGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628224 71 + 59248254 TCAGGTAGGGCGTTCCGCATTTTTTTCCTCATCACACCTGTGT---CCCTGTC-CCCATCTTAGCAAGTTGAAGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496012 71 - 13342542 TCAGGTAGGGTGTTCCGCATTTTTTTCCTCATCACACCTGTGT---CCCTGTC-CCCATCTTAGCAAGTTGAAGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426818 71 + 7714307 TCAGGTAGGGCGTTCCACATTTTTTTCCTCATCACACCTGTGT---CCCTGTC-CCCATCTTAGCAAGTTGAAGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29234058 71 + 50890351 TCAGGTAGGGCGTTCCGCATTTTTTTCCTCATCACACCTGTGT---CCCTGTC-CCCATCTTAGCAAGTTGAAGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857642 71 - 2385121 TCAGGTAGGGTGTTCCACATTTTTTTCCTCATCACACCTGTGT---CCCTGTC-CCCATCTTAGCAAGTTGAAGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293531 71 + 4274983 TCAGGTAGGGCGTTCCACATTTTTTTCCTCATCACACCTGTGT---CCCTGTC-CCCATCTTAGCAAGTTGAAGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28527975 74 + 49145316 TCAGGTA-GCCATTCCACATTTTTTTCCTCATCACACCTGTGTGTGTGATGTATCCCATCTTAGCAAGTTGAAGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372241 70 + 8899380 TCAGGTAGGCCATTCCACA-TTTTTTCCTCATCATACCTATGT---CCCTGTA-CCCATCTTAGCAAGTTGAAGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582689 71 - 2680843 TCAGGTAGGCCATTCCACATTTTTTTCCTCATCACACCTGTGT---CCCTGTA-CCCATCTTAGCAAGTCGAATG i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5444896 62 + 5549422 ----CTAGAGCATTCTGCGTCTTTTCCCTTATCACACCTGTTT---TCT-----TCCATC-TACCAAATTGCAAG i otoGar3.GL873654 C 0 I 1 s canFam3.chr1 4587192 69 - 122678785 TCAACTAGGGTATTCTACATCTTTCCCCTTGCCACATCAGTGT---TC-TGTC-CTCATC-TACCAATATGGAGG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 530636 113 + 2501019 I e micMur3.chr22 3936281 584 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e aotNan1.NW_018505377v1 333657 271 - 4471408 I a score=391088.000000 s hg38.chr19_GL383574v1_alt 39735 53 + 155864 TGCTAGTCAAAATTTCTCTGGGGGGCAGGAGAGGGCAGAGGATACTTACG-TAT s panTro5.chr19 36108355 52 + 61309027 TGCTAGTCAAAATTTCTCT-GGGGGCAGGAGAGGGCAGAGGATACTTACG-TAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854409 52 + 64411610 TGCTAGTCAAAATTTCTCT-GGGGGCAGGAGAGGGCAGAGGATACTTACG-TAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272144 52 - 8369475 TGCTAGTCAAAATTTCTCT-GGGGGCAGGAGAGGGCAGAGGATACTTACG-TAT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30175419 52 + 53671032 TGCTAGTCAAAATTTCTCT-CAGGGGAGGAGAGGGCAAGGGATACTTACA-TAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628295 52 + 59248254 TGCTAGTCAAAATTTCTCT-CAGGGGAGGAGAGGGCAAGGGATACTTACA-TAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496083 52 - 13342542 TGCTAGTCAAAATTTCTCT-CAGGGGAGGAGAGGGCAAGGGATACTTACA-TAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426889 52 + 7714307 TGCTAGTCAAAATTTCTCT-CAGGGGAGGAGAGGGCAAGGGATACTTACA-TAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29234129 52 + 50890351 TGCTAGTCAAAATTTCTCT-CAGGGGAGGAGAGGGCAAGGGATACTTACA-TGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857713 52 - 2385121 TGCTAGTCAAAATTTCTCT-CAGGGGAGGAGAGGGCAAGGGATACTTACA-TAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293602 52 + 4274983 TGCTAGTCAAAATTTCTCT-CAGGGGAGGAGAGGGCAAGGGATACTTACA-TAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528049 51 + 49145316 TACTAGTCAAAATTTCTCT-GGAGGGAGGAGAGGGCAGGGGATAC-TACG-TAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372311 52 + 8899380 TACTAGCCAAAATTTTTCT-GGAGGGAGGAGAGGGCAGGGGGTAC-TACATTAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582760 51 - 2680843 TACTAGTCAAAATTTCTCT-GGAGGGAGGAGAGGGCAGAGGATAC-TACG-TAT i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5444959 50 + 5549422 TACCAGTCAAAATTTCCAT-GGAGAG-GGAACAGGTAGGGGGTAC-TACA-TAT i otoGar3.GL873654 I 1 C 0 s canFam3.chr1 4587261 34 - 122678785 TCCCAGTGAAAATTTTTCA--------GGATATGG-----------TGTA-TAT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 530636 113 + 2501019 I e micMur3.chr22 3936281 584 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e aotNan1.NW_018505377v1 333657 271 - 4471408 I e nomLeu3.chr10 63866877 125 - 106955855 I a score=147916.000000 s hg38.chr19_GL383574v1_alt 39788 13 + 155864 GGATTCTGGGGTT s panTro5.chr19 36108407 13 + 61309027 GGATTCTGGGGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854461 13 + 64411610 GGATTCTGGGGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272196 13 - 8369475 GGATTCTGGGGTT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30175471 13 + 53671032 GGATTCTGGGCTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628347 13 + 59248254 GGATTCTGGGCTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496135 13 - 13342542 GGATTCTGGGCTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426941 13 + 7714307 GGATTCTGGGCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29234181 13 + 50890351 GGATTCTGGGCTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857765 13 - 2385121 GGATTCTGGGCTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293654 13 + 4274983 GGATTCTGGGCTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528100 13 + 49145316 GGATTCTGGGCTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372363 13 + 8899380 GGATTCTGGGCTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582811 13 - 2680843 GGATTCTGGGCTT i cebCap1.NW_016107633v1 C 0 C 0 s proCoq1.NW_012149263v1 530749 13 + 2501019 GGATTCTGGGCTT i proCoq1.NW_012149263v1 I 113 C 0 s otoGar3.GL873654 5445009 13 + 5549422 GGATCCTGGGCTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4587295 13 - 122678785 GGATTCTCAGATT i canFam3.chr1 C 0 C 0 e micMur3.chr22 3936281 584 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e aotNan1.NW_018505377v1 333657 271 - 4471408 I e nomLeu3.chr10 63866877 125 - 106955855 I a score=201780.000000 s hg38.chr19_GL383574v1_alt 39801 17 + 155864 GGTCTTTCAGTTTCAAC s panTro5.chr19 36108420 17 + 61309027 GGTCTTTCAGTTTCAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854474 17 + 64411610 GGTCTTTCAGTTTCAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272209 17 - 8369475 GGTCTTTCAGTTTCAAC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30175484 17 + 53671032 GGTCTTTCAGTTTCAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628360 17 + 59248254 GGTCTTTCAGTTTCAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496148 17 - 13342542 GGTCTTTCAGTTTCAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426954 17 + 7714307 GGTCTTTCAGTTTCAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29234194 17 + 50890351 GGTCTTTCAGTTTCAGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857778 17 - 2385121 GGTCTTTCAGTTTCAAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293667 17 + 4274983 GGTCTTTCAGTTTCAGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528113 17 + 49145316 GATCTTTCAGTTTCAAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372376 17 + 8899380 GGTCTTTCAGTTTCAAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582824 17 - 2680843 GGTCTTTTAGTTTCAAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 333928 17 - 4471408 GGTCTTTCAGTTTCAGC i aotNan1.NW_018505377v1 I 271 C 0 s proCoq1.NW_012149263v1 530762 17 + 2501019 GGTCTTCCAATTTGGAC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5445022 17 + 5549422 AGTCTTCTAGTTTGGAC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4587308 17 - 122678785 GGTCTTCCTTTTTGGAC i canFam3.chr1 C 0 C 0 e micMur3.chr22 3936281 584 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e nomLeu3.chr10 63866877 125 - 106955855 I a score=115470.000000 s hg38.chr19_GL383574v1_alt 39818 8 + 155864 TAACTCAT s panTro5.chr19 36108437 8 + 61309027 TAACTCAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854491 8 + 64411610 TAACTCAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272226 8 - 8369475 TAACTCAT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30175501 8 + 53671032 TAACTCAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628377 8 + 59248254 TAACTCAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496165 8 - 13342542 TAACTCAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426971 8 + 7714307 TAACTCAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29234211 8 + 50890351 TAACTCAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857795 8 - 2385121 TAACTCAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293684 8 + 4274983 TAACTCAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528130 8 + 49145316 TCACTCAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372393 8 + 8899380 TAACTCAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582841 8 - 2680843 TAACTCAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 333945 8 - 4471408 TAACTCAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3936865 8 - 30143674 TAACTCAT i micMur3.chr22 I 584 C 0 s proCoq1.NW_012149263v1 530779 8 + 2501019 TAACTCAT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5445039 8 + 5549422 TAATTAGT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4587325 8 - 122678785 TAACTCAT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e nomLeu3.chr10 63866877 125 - 106955855 I a score=272203.000000 s hg38.chr19_GL383574v1_alt 39826 23 + 155864 TCTGTAC-CTGAATGATACTATTT s panTro5.chr19 36108445 23 + 61309027 TCTGTAC-CTGAATGATACTATTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854499 23 + 64411610 TCTGTAC-CTGAATGATACTATTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272234 23 - 8369475 TCTGTAC-CTGAATGATACTATTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867002 23 - 106955855 TCTGTAT-CTGAATGATACTATTT i nomLeu3.chr10 I 125 C 0 s rheMac8.chr19 30175509 23 + 53671032 TCTGTAC-CTTAATTGTACTATTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628385 23 + 59248254 TCTGTAC-CTTAATTGTACTATTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496173 23 - 13342542 TCTGTAC-CTTAATTGTACTATTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5426979 23 + 7714307 TCTGTAC-CTTAATTGTACTATTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29234219 23 + 50890351 TCTGTAC-CTTAATTGTACTATTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857803 23 - 2385121 TCTGTAC-CTTAATTGTACTATTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293692 23 + 4274983 TCTGTAC-CTTAATTGTACTGTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528138 23 + 49145316 TCTGTAC-CTGAATGATACTATTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372401 23 + 8899380 TCTGTAC-CTGAATGATACTATTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582849 23 - 2680843 TCTGCAC-CTGAATGATACTATTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 333953 24 - 4471408 TCTGTACGCTGAATGATACTGTTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3936873 22 - 30143674 TCTGTGT-CTGA-TGATACTTTTC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 530787 22 + 2501019 TCTATGT-CTGA-TGATACTTTTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5445047 23 + 5549422 TCTGTGT-CTGAGTGATACttttt i otoGar3.GL873654 C 0 I 4 s canFam3.chr1 4587333 23 - 122678785 TCAGTAT-TGGAGTAATACTTTTA i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I a score=220020.000000 s hg38.chr19_GL383574v1_alt 39849 16 + 155864 AATAAAATTTCGTGGT s panTro5.chr19 36108468 16 + 61309027 AATAAAATTTCGTGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854522 16 + 64411610 AATAAAATTTCGTGGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272257 16 - 8369475 AATAAAATTTCGTGGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867025 16 - 106955855 AATAACATTTCGTGGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30175532 16 + 53671032 AATAAAATTTCATGGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628408 16 + 59248254 AATAAAATTTCATGGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496196 16 - 13342542 AATAAAATTTCATGGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427002 16 + 7714307 AATAAAATTTCATGGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29234242 16 + 50890351 AATAAAATTCCATGGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857826 16 - 2385121 AATAAAATTTCATGGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293715 16 + 4274983 CATAAAATTTCATGGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528161 16 + 49145316 AATAAAATTTCATGGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372424 16 + 8899380 AATAAAATTTCATGGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582872 16 - 2680843 AATAAAATTTCATGGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 333977 16 - 4471408 AATAAAATTTCATGGT i aotNan1.NW_018505377v1 C 0 I 191 s micMur3.chr22 3936895 16 - 30143674 TGTAAAAGTTCATGGT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 530809 16 + 2501019 AATAAAAGTTTATGGT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5445074 16 + 5549422 gacagagtctcacttt i otoGar3.GL873654 I 4 C 0 s canFam3.chr1 4587356 16 - 122678785 AATAAAATGTCGTGGT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I a score=338112.000000 s hg38.chr19_GL383574v1_alt 39865 34 + 155864 ATGAGTTTGAGAACTTGTCATGATTTTAGGGATA s panTro5.chr19 36108484 34 + 61309027 ATGAGTTTGAGAACTTGTCATGATTTTAGGGATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854538 34 + 64411610 ATGAGTTTGAGAACTTGTCATGATTTTAGGGATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272273 33 - 8369475 ATGAGTTTGAGAACTTGTCATGATTTTA-GGATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867041 34 - 106955855 ATGGGTTTGAGAACTTTTCATGATTTTAGGGATG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30175548 34 + 53671032 ATGAGTTTGAGAACTTTTCGTGATTTTAGGGATA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628424 34 + 59248254 ATGAGTTTGAGAACTTTTCGTGATTTTAGGGATA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496212 34 - 13342542 ATGAGTTTGAGAACTTTTCGTGATTTTAGGGATA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427018 34 + 7714307 ATGAGTTTGAGAACTTTTCGTGATTTTAGGGATA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29234258 34 + 50890351 ATGAGTTTGAGAACTTTTCGTGATTTTAGGGATA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857842 34 - 2385121 ATGAGTTTGAGAACTTTTCGTGATTTTAGGGATA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293731 34 + 4274983 ATAAGTTTGAGAACTTTTCATGATTTTAGGGATA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528177 34 + 49145316 ATGAATTTGAGAATTTTTCATGCTTGTAGGGATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372440 34 + 8899380 ATGAATTTGAGAATTTTTCATGATTTTAGGGATA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582888 34 - 2680843 ATGAATTTGAGAATTTTTCATGATTGTAGGGATA i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3936911 33 - 30143674 ATGAGTTTGAGATCTTTTCTTGATT-TAAGGATA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 530825 33 + 2501019 ACGAGTTTGAGATCTTTTCTTGACT-TAAAGATA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5445090 26 + 5549422 atcaccctcagtacagtgct--------gtggcg i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4587372 27 - 122678785 ATAAGTCTGAGATTT-------AGTTTCGGGGTA i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111061518 3562 - 145441459 I e aotNan1.NW_018505377v1 333993 191 - 4471408 I a score=366670.000000 s hg38.chr19_GL383574v1_alt 39899 38 + 155864 TTTTAACTTCCTTTTTG-TTTCTTTC---CTTTA-GTT-TTAGG s panTro5.chr19 36108518 38 + 61309027 TTTTAACTTCCTTTTTG-TTTCTTTC---CTTTA-GTT-TTAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854572 38 + 64411610 TTTTAACTTCCTTTTTG-TTTCTTTC---CTTTA-GTT-TTAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272306 38 - 8369475 TTTTAACTTCCTTTTTG-TTTCTTTC---CTTTA-GTT-TTAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867075 34 - 106955855 TTTTAACTTCCTT-----TTTCTTTC---CTCTA-GTT-TTAGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30175582 38 + 53671032 TTTTAACTTCCTTTTTG-TTTTTTTC---CTTTA-GTT-TTAGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628458 38 + 59248254 TTTTAACTTCCTTTTTG-TTTTTTTC---CTTTA-GTT-TTAGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496246 38 - 13342542 TTTTAACTTCCTTTTTG-TTTTTTTC---CTTTA-GTT-TTAGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427052 38 + 7714307 TTTTAACTTCCTTTTTG-TTTTTTTC---CTTTA-GTT-TTAGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29234292 38 + 50890351 TTTTAACTTCCTTTTTG-TTTTTTTC---CTTTA-GTT-TTAGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857876 39 - 2385121 TTTTAACTTCCTTTTTGTTTTTTTTC---CTTTA-GTT-TTAGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293765 38 + 4274983 TTTTAACTTCCTTTTTG-CTTTTTTC---CTTTA-GTT-TTAGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528211 34 + 49145316 TTTTAACTTCCTT-----TTTCTTTC---CTTTA-GTT-TTAGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372474 34 + 8899380 TTTTAACTTCCTT-----TTTCTTTC---CTATA-GTT-TTAGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582922 34 - 2680843 TTTTAACTTCCTT-----TTTCTTTC---CTATA-GTT-CTAGG i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3936944 38 - 30143674 TTTTAACTTCCAT-TTG-TTTATTTC---CTTTA-GTTCTTAGG i micMur3.chr22 C 0 I 3 s proCoq1.NW_012149263v1 530858 34 + 2501019 TTTTAACTTCCTT-TTG-----TTTC---CTTTA-GTTTTTAGG i proCoq1.NW_012149263v1 C 0 I 3 s otoGar3.GL873654 5445116 37 + 5549422 tcacagctcacag-caa-----actccaactctt-ggacttagg i otoGar3.GL873654 C 0 I 728 s mm10.chr7 111065080 40 - 145441459 TTTGAGCTTCCCTTTGACTTTCATCT---CTTTACATT-TTAGA i mm10.chr7 I 3562 C 0 s canFam3.chr1 4587399 31 - 122678785 TTTTAACTCTCTT-----TGTCTATT---C---A-GTT-TTAGG i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I e aotNan1.NW_018505377v1 333993 191 - 4471408 I a score=1483984.000000 s hg38.chr19_GL383574v1_alt 39937 114 + 155864 ---GAAGGATCTTCTGCCAAACTAC--CTGTGCCACTG---TC-TTTCCTGGA--AGTCTCATAAGTACTAGAAAGAACTTTTAGAATAAGAGTGT-AGGACATTATTTACACTGAAATAACATTC s panTro5.chr19 36108556 114 + 61309027 ---GAAGGATCTTCTGCCAAACTAC--CTGTGCCACTG---TC-TTTCCTGGA--AGTCTCATAAGTACTAGAAAGAACTTTTAGAATAAGAGTAT-AGGACATTATTTACACTGAAATAACATTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854610 114 + 64411610 ---GAAGGATCTTCTGCCAAACTAC--CTGTGCCACTG---TC-TTTCCTGGA--AGTCTCATAAGTACTAGAAAGAACTTTTAGAATAAGAGTAT-AGGACATTATTTACACTGAAATAACATTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272344 114 - 8369475 ---GAAGGATCTTCTGCCAAACTAC--CTGTGCCACTG---TC-TTTCCTGGA--AGTCTCATAAGTACTAGAAAGAACTTTTAGAATAAGAGTGT-AGGACATTATTTACACTGAAATAACATTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867109 112 - 106955855 ---GAAGGATCTTCTGCCAAACTAC--CTGTGCCACTG---TC-TTTCCTGGA--AGTCTCATAAGTACTAGAAAGAACTTTTAGAATA--AGTGT-AGGACATTATTTACACTGAAATAACAttc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30175620 114 + 53671032 ---GAAGGATCTTCTGCCAAACTAC--CTGTGCCACTA---TC-TTTCCTGAA--AGTCTCATAAGTACTAGAAAGAACTTTTAGAATAAGAGTGT-AGGACATTATTTACACTGAAATAATAttc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628496 114 + 59248254 ---GAAGGATCTTCTGCCAAACTAC--CTGTGCCACTA---TC-TTTCCTGAA--AGTCTCATAAGTACTAGAAAGAACTTTTAGAATAAGAGTGT-AGGACATTATTTACACTGAAATAATAttc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496284 114 - 13342542 ---GAAGGATCTTCTGCCAAACTAC--CTGTGCCACTA---TC-TTTCCTGAA--AGTCTCATAAGTACTAGAAAGAACTTTTAGAATAAGAGTGT-AGGACATTATTTACACTGAAATAATAttc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427090 114 + 7714307 ---GAAGGATCTTCTGCCAAACTAC--CTGTGCCACTA---TC-TTTCCTGAA--AGTCTCATAAGTACTAGAAAGAACTTTTAGAATAAGAGTGT-AGGACATTATTTACACTGAAATAATAttc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29234330 114 + 50890351 ---GAAGGATCTTCTGCCAAACTAC--CTGTGCCACTG---TC-TTTCCTGAA--AGTCTCATAAGTACTAGAAAGAACTTTTAGAATAAGAGTGT-AGGACATTATTTACACTGAAATAATAttc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 857915 114 - 2385121 ---GAAGGATCTTCTGCCAAACTAC--CTGTGCCACTA---TC-TTTCCTGAA--AGTCTCATAAGTACTAGAAAGAACTTTTAGAATAAGAGTGT-AGGACATTATTTACACTGAAATAATAttc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293803 113 + 4274983 ---GAAGGATCTTCTGCCAAACTAC--CTGTGCCACTA---TC-TTTCCTG-A--AGTCTCATAAGTACTAGAAAGAACTTTCAGAATAAGAGTGT-AGGACATTATTTACACTGAAATAATATTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528245 115 + 49145316 ---GAAGGATTTTCTGCCAAACTGC--CTGTGCTACTA---TC-TTTCCTGGA--AGTCTCATAAATACTAGAAAGAATTTTTAGAATAAGAGTATAAAGACATTATTTACACTAAAATAACAttc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372508 115 + 8899380 ---GAAGGATTTTCTGCCAGACTGC--CTGTGCTACTA---TC-TTTCCTGGA--AGTCTCATAAATACTAAAAAGAATTTTTAGAATAAGAGTGTAAAGACATTATTTACACTGAAGTAACAttc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1582956 114 - 2680843 ---GAAGGATTTTCTGCCAAACTGC--CTGTGCTACTA---TC-TTTCCTGGA--AGTCTCATAAATACTAGAAAGAATTTTTAGAATAAGAGTGTAAAGACATTATTTACACTGAAATAA-Attc i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3936985 114 - 30143674 ---GGATGCTCTTCTGCAAACCTAC--CTATGACACCA---TCTTTTCCTGGA--AGTCTCAT-AGTACAAGAAAGAACTTTTAGAATAAGAAAAT-AGGACATTATTTAAACTGAAATAACATTC i micMur3.chr22 I 3 I 68 s proCoq1.NW_012149263v1 530895 114 + 2501019 ---GGACGCTCTTCTGCAAACCTAC--CTACACCACCA---TCTTTTCCTGGA--AGTCTCAT-AGTATAAGAAAGAATTTTTAGAATAAGAAAAT-AGGACATTATTTAAACTGAAATAACATTC i proCoq1.NW_012149263v1 I 3 I 64 s otoGar3.GL873654 5445881 114 + 5549422 ---GAATGCTCTTCTGCAAACCTAT--ATATGCCACCA---TCTTTTCCTGGA--AGTCTCAG-AATCCAAGAAAGAATATTTAGAATAAGAAAAT-AAGTCATTATTTAAACTGAAGTAACATTC i otoGar3.GL873654 I 728 I 1 s mm10.chr7 111065120 115 - 145441459 ---GAAGGGTATTCTGCAAACCTAA--TAATGATGCTATAGTC-TTTCTTGAAACATCCTCATACGTATTAG---GAATTTTTAGAATAAGGAAAC-AAGACATTA-TTAAACTGAAATAACATTC i mm10.chr7 C 0 I 1 s canFam3.chr1 4587430 114 - 122678785 GAAGAATATTCTTCTGCAAGCCTACATCTATGCCACCA---TC-TTTC-TGGA--AGCATAATGAGTAATA----GACTTTTTAACATAAAGGAGG-GAAGCATTATTTAAAAGGAAGTAACATTC i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I e aotNan1.NW_018505377v1 333993 191 - 4471408 I a score=30886.000000 s hg38.chr19_GL383574v1_alt 40051 5 + 155864 -TTTTT s panTro5.chr19 36108670 5 + 61309027 -TTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854724 5 + 64411610 -TTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272458 5 - 8369475 -ttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867221 5 - 106955855 -ttttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30175734 5 + 53671032 -ttttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628610 5 + 59248254 -ttttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496398 5 - 13342542 -ttttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427204 5 + 7714307 -ttttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29234444 5 + 50890351 -ttttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858029 5 - 2385121 -ttttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293916 5 + 4274983 -TTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528360 5 + 49145316 -ttttt i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1583070 5 - 2680843 -ttttt i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5445996 4 + 5549422 -TGTT- i otoGar3.GL873654 I 1 T 707 s mm10.chr7 111065236 4 - 145441459 -TTCT- i mm10.chr7 I 1 I 62 s canFam3.chr1 4587544 5 - 122678785 ATATT- i canFam3.chr1 C 0 I 55 e proCoq1.NW_012149263v1 531009 64 + 2501019 I e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e aotNan1.NW_018505377v1 333993 191 - 4471408 I e saiBol1.JH378197 5372623 0 + 8899380 C a score=-45715.000000 s hg38.chr19_GL383574v1_alt 40056 10 + 155864 GT---------TGtttttt s panTro5.chr19 36108675 10 + 61309027 GT---------TGTGtttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854729 10 + 64411610 GT---------TGTGtttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272463 10 - 8369475 gt---------tgttgttt i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30175739 3 + 53671032 ta---------a------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628615 3 + 59248254 ta---------a------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496403 3 - 13342542 ta---------a------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427209 3 + 7714307 ta---------a------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29234449 3 + 50890351 ta---------a------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858034 3 - 2385121 ta---------a------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293921 10 + 4274983 TA---------ATTATTTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528365 2 + 49145316 tt----------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372623 1 + 8899380 -t----------------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1583075 11 - 2680843 ttttttttttt-------- i cebCap1.NW_016107633v1 C 0 I 1530 e proCoq1.NW_012149263v1 531009 64 + 2501019 I e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5446000 707 + 5549422 T e mm10.chr7 111065240 62 - 145441459 I e canFam3.chr1 4587549 55 - 122678785 I e aotNan1.NW_018505377v1 333993 191 - 4471408 I e nomLeu3.chr10 63867226 0 - 106955855 C a score=-184.000000 s hg38.chr19_GL383574v1_alt 40066 1 + 155864 t s panTro5.chr19 36108685 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854739 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272473 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s colAng1.NW_012111697v1 2293931 1 + 4274983 A i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5445293 1 + 5549422 C i otoGar3.GL873654 T 707 C 0 e proCoq1.NW_012149263v1 531009 64 + 2501019 I e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111065240 62 - 145441459 I e chlSab2.chr6 29234452 0 + 50890351 C e canFam3.chr1 4587549 55 - 122678785 I e aotNan1.NW_018505377v1 333993 191 - 4471408 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I e saiBol1.JH378197 5372624 0 + 8899380 C e calJac3.chr22 28528367 0 + 49145316 C e manLeu1.NW_012102454v1 858037 0 - 2385121 C e cerAty1.NW_012005268v1 5427212 0 + 7714307 C e macNem1.NW_012011689v1 4496406 0 - 13342542 C e macFas5.chr19 34628618 0 + 59248254 C e rheMac8.chr19 30175742 0 + 53671032 C e nomLeu3.chr10 63867226 0 - 106955855 C a score=-6120.000000 s hg38.chr19_GL383574v1_alt 40067 6 + 155864 tt-------tttt-- s panTro5.chr19 36108686 13 + 61309027 ttgttgttgtttt-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854740 12 + 64411610 ttgttgtt-gttg-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272474 2 - 8369475 tt------------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867226 4 - 106955855 ---------tttt-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30175742 4 + 53671032 ---------ttat-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628618 4 + 59248254 ---------ttat-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496406 4 - 13342542 ---------ttat-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427212 4 + 7714307 ---------ttat-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29234452 4 + 50890351 ---------ttat-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858037 4 - 2385121 ---------ttat-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293932 9 + 4274983 tttat----ttat-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528367 4 + 49145316 ---------tttt-- i calJac3.chr22 C 0 I 2 s saiBol1.JH378197 5372624 4 + 8899380 ---------tttt-- i saiBol1.JH378197 C 0 I 2 s otoGar3.GL873654 5445294 6 + 5549422 ---------tttttt i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 531009 64 + 2501019 I e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111065240 62 - 145441459 I e canFam3.chr1 4587549 55 - 122678785 I e aotNan1.NW_018505377v1 333993 191 - 4471408 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=1651666.000000 s hg38.chr19_GL383574v1_alt 40073 197 + 155864 ttttttt-tttggagtcagattgtcattctgtcacccaggctggagtgcaggagcgccatcttg-----gctcactgcaacttctgcctcttgagttcagccaatcctcccgcctcagccacctgagcagctaggactacaggtgcatgccaacatgcccagctaatgattttttgta-tttttagtagagatggggtttcacc s panTro5.chr19 36108699 197 + 61309027 ttttttt-tttggagtcagattgtcattctgtcacccaggctggagtgcaggagcgccatcttg-----gctcactgcaacttctgcctcttgagttcagccaatcctcccgcctcagccacctgagcagctaggactacaggcgcataccaacatgcccagctaatgattttttgta-tttttagtagagatggggtttcacc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854752 197 + 64411610 ttttttt-tttggagtcagattgtcattctgtcacccaggctggagtgcaggagcgccgtcttg-----gctcactgcaacttctgcctcttgagttcagccaatcctcccgcctcagccacctgagcagctaggactacaggcgcataccaacatgcccagctaatgattttttgta-tttttagtagagatggggtttcacc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272476 196 - 8369475 -tttttt-tttagagtcagattgtcattctgtcacccaggctggagtgcaggagcaccatcttg-----gctcactgcaacctctgcctcttgagttcagccaatcctcccgcctcagccacctgagcagctaggactacaggtgcatgccaacatgcccagctaatgattttttgta-tttttagtagagatagggtttcact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867230 197 - 106955855 ttttttt-tttggagtcagattgtcactccatcacccaggctggagtgcaggggcgccatctca-----gctcactgcaacctctgcctcttgagttcggccaatcttcccacctcagccacctgagcagctaggactacaggcttatgccaacatgcctagctaatgattttttgta-tttttagtagagatagggtttcacc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30175746 203 + 53671032 ttattta-ttttaagtcagattgttgctctgtcacccaggctggagtgcaggggcaccatctcggctcagctcactgcaacttctgcctcttgagttctgccaatcctctcacctcagcctcctgagcagctaggactacaggtgcacaccaacgtgcccagctaattattttttgtattttttggtagagacagggtttcacc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628622 203 + 59248254 ttattta-ttttaagtcagattgttgctctgtcacccaggctggagtgcaggggcaccatctcggctcagctcactgcaacttctgcctcttgagttctgccaatcctctcacctcagcctcctgagcagctaggactacaggtgcacaccaacgtgcccagctaattattttttgtgttttttggtagagacagggtttcacc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496410 203 - 13342542 ttattta-ttttaagtcagattgttgctctgtgacccaggctggagtgcaggggcaccatctcggctcagctcactgcaacttctgcctcttgagttctgccgatcctctcacctcagcctcctgagcagctaggactacaggtgcacaccaacgtgcccagctaattattttttgtattttttggtagagacagggtttcacc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427216 201 + 7714307 ttattta-ttttaagtcagattgttgctctgtcacccaggctggagtgcagcggcaccatctcggctcagctcactgcaacttctgcctcttgagttctgccaatcctctcacctcagcctcctgagcagctaggactacaggtgcacaccaacatgcccagctaattattttttgtattttttagt--agacagagtttcacc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29234456 203 + 50890351 ttattta-ttttaagtcagattgttgctctgtcacccaggctggagtgcaggggcaccatctcggctcagctcactgcaacttctgcctcttgagttctgccaatcctctcacctcagcctcctgagcagctaggactacaggtgcacaccaacatgcccagctaattattttttgtattttttagtagagacagggtttcacc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858041 201 - 2385121 ttattta-ttttaagtcagattgttgctctgtcacccaggctggagtgcaggggcaccatctcggctcagctcactgcaacttctgcctcttgagttctgccaatcctctcacctcagcctcctgagcagctaggactacaggtgcacaccaacatgcccagctaattattttttgtattttttagt--agacagggtttcacc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2293941 204 + 4274983 ttatttatttttgagtcagattgttgctctgtcacccaggctggagtgcagggtcaccatctcagctcagctcactgcaacctctgcctcttgagttctgccaatcctctcacctcagcctcctgagcagctaggactacaggcgcacaccaacatgcccagctaattattttttgtattttttagtagagacagggtttcacc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528373 196 + 49145316 ttttttt-ttttgagtcagagtctcgctctgtcacccaggctggagtgcagtggcatcatttca-----gcttactgcaacctctgcctcttgaattcaaccagtcctccca-atcagcctcctgagcagctagatttacagactcatgccaacatacccacctaattattttttgtg-tttttaatagagatagtatttcacc i calJac3.chr22 I 2 C 0 s saiBol1.JH378197 5372630 197 + 8899380 tttttct-ctttgagtcagagtctcactctgtcacccaggctggagtgcagtggcatcatttta-----gctaactgcaacctctgcctcttgagttcaaccaatcctcccacatcagcctcctgagcagctagacttacagacgcgtgccaacatacccacgtaattattttttgta-tttttaatagagatgggatttcacc i saiBol1.JH378197 I 2 C 0 s aotNan1.NW_018505377v1 334184 197 - 4471408 ttttttt-ttttgagtcagagtctcactctgtcacccaggctggagtgcagtggcatcatttca-----gctcactgcaacctctgcctcttgagttcaaccaatcctcccacatcagcctcctgagcagctagacttacagacgcgtgccaacatacccacctaattattttttgta-tttttaatagagatgggatttcacc i aotNan1.NW_018505377v1 I 191 C 0 s otoGar3.GL873654 5445300 189 + 5549422 ttttttt-tgtagagacagagttttgcttcatcacccttggcagagtgccacagagtcacact------gctcacagccacctc-------tgggtttaggcgattctcttgcctcagcctcccaagtagctgggactacaggtgcctaccacaaagcctgactatttttttgtttca-gtttggccagggctgggtttgaacc i otoGar3.GL873654 C 0 I 1006 e proCoq1.NW_012149263v1 531009 64 + 2501019 I e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111065240 62 - 145441459 I e canFam3.chr1 4587549 55 - 122678785 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=752635.000000 s hg38.chr19_GL383574v1_alt 40270 93 + 155864 a--ttttgttgaggccggtgtcaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattgcaggcatgag-----------------------------------gcgctgcA s panTro5.chr19 36108896 92 + 61309027 a--ttttgttgaagctggtgtcaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattgcaggcatga------------------------------------gcGCTGCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39854949 92 + 64411610 a--ttttgttgaagctggtgtcaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattacaggcatga------------------------------------gcGCTGCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272672 93 - 8369475 g--ttttgttgaggctggtgtcaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattgcaggcatgag-----------------------------------gcgctgcA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867427 93 - 106955855 a--ttttgttgaggctggggtccgactcccgacctcaagtgatctgcccatctcgggct-acaaagtgctgcgattacaggcACTAG----------------------------------AGCGCTGCT i nomLeu3.chr10 C 0 I 93 s rheMac8.chr19 30175949 93 + 53671032 a--ttttgttgaggctggtgtcaaactcctgacctcaagtgatctgcccacctcggcctcccaaagtgctggaattacaggcatgag-----------------------------------ccactgca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34628825 93 + 59248254 a--ttttgttgaggctggtgtcaaactcctgacctcaagtgatctgcccacctcggcctcccaaagtgctggaattacaggcatgag-----------------------------------ccactgca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496613 93 - 13342542 a--ttttgttgaggctggtgtcaaactcctgacctcaagtgatctgcccacctcggcctcccaaagtgctggaattacaggcatgag-----------------------------------ccactgca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427417 93 + 7714307 a--ttttgttgaggctggtgtcaaactcctgacctcaagtgatctgcccacctcggccccccaaagtgctggaattacaggcatgag-----------------------------------ccactgca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29234659 93 + 50890351 a--ttttgttgaggctggtgtcaaactcctgacctcaagtgatctgcccacctcggcctcccaaagtgctggaattacaggcatgag-----------------------------------ccactgca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858242 93 - 2385121 a--ttttgttgaggctggtgtcaaactcctgacctcaagtgatctgcccacctcagccccccaaagtgctggaattacaggcatgag-----------------------------------ccactgca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2294145 93 + 4274983 a--ttttgttgaggctggtgtcaaactcctgacctcaagtgatctgcccacctcggcctcccaaagtgctggaattacaggcatgag-----------------------------------ccactgca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528569 128 + 49145316 a--ttttgaccaggctggtgtcaaactcctgacctcaagtgatctgccctccttggcctcccaaagtgctgggattacaggcacgagccaGTAGATTCAGCCTGACATTCATCCTTAATCTAGCACTGCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372827 128 + 8899380 a--ttttggccaggctggtgtcaaactcctgacctcaagtgatctgcccaccttggcctctcaaagtgctgggattacaggcacaagccaGTAGATCTAGCCTGACATTCATCCTTAATCTAGCACTGCA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 334381 130 - 4471408 attttttggccaggctggtgtcaaactcctaacctcaagtgatctgcccaccttggcctcccaaagtgctgggattacaggcatgagccaGTAGATCCAGCCTGACATTCATCCTTAATCCAGCACTGCG i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 531009 64 + 2501019 I e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5445489 1006 + 5549422 I e mm10.chr7 111065240 62 - 145441459 I e canFam3.chr1 4587549 55 - 122678785 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=13031.000000 s hg38.chr19_GL383574v1_alt 40363 2 + 155864 TC s panTro5.chr19 36108988 2 + 61309027 TC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855041 2 + 64411610 TC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272765 2 - 8369475 TC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30176042 2 + 53671032 tc i rheMac8.chr19 C 0 I 584 s macFas5.chr19 34628918 2 + 59248254 tc i macFas5.chr19 C 0 I 35 s macNem1.NW_012011689v1 4496706 2 - 13342542 tc i macNem1.NW_012011689v1 C 0 I 35 s cerAty1.NW_012005268v1 5427510 2 + 7714307 tc i cerAty1.NW_012005268v1 C 0 I 23 s chlSab2.chr6 29234752 2 + 50890351 tc i chlSab2.chr6 C 0 I 35 s manLeu1.NW_012102454v1 858335 2 - 2385121 tc i manLeu1.NW_012102454v1 C 0 I 23 s colAng1.NW_012111697v1 2294238 2 + 4274983 tc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528697 2 + 49145316 TT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372955 2 + 8899380 TT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 334511 2 - 4471408 TT i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 531009 64 + 2501019 I e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5445489 1006 + 5549422 I e mm10.chr7 111065240 62 - 145441459 I e canFam3.chr1 4587549 55 - 122678785 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I e nomLeu3.chr10 63867520 93 - 106955855 I a score=26629.000000 s hg38.chr19_GL383574v1_alt 40365 7 + 155864 AGTTCTG s panTro5.chr19 36108990 7 + 61309027 AGTTCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855043 7 + 64411610 AGTTCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272767 7 - 8369475 AGTTCTG i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34628955 7 + 59248254 AGTTCTG i macFas5.chr19 I 35 C 0 s macNem1.NW_012011689v1 4496743 7 - 13342542 AGTTCTG i macNem1.NW_012011689v1 I 35 C 0 s chlSab2.chr6 29234789 7 + 50890351 AGTTCTG i chlSab2.chr6 I 35 C 0 s colAng1.NW_012111697v1 2294240 7 + 4274983 caaccTG i colAng1.NW_012111697v1 C 0 I 36 s calJac3.chr22 28528699 7 + 49145316 AGTTCTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372957 7 + 8899380 AGTTCTA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 334513 7 - 4471408 AGTTCTA i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 531009 64 + 2501019 I e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5445489 1006 + 5549422 I e mm10.chr7 111065240 62 - 145441459 I e canFam3.chr1 4587549 55 - 122678785 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I e manLeu1.NW_012102454v1 858337 23 - 2385121 I e cerAty1.NW_012005268v1 5427512 23 + 7714307 I e rheMac8.chr19 30176044 584 + 53671032 I e nomLeu3.chr10 63867520 93 - 106955855 I a score=-36917.000000 s hg38.chr19_GL383574v1_alt 40372 23 + 155864 ----------Caaaaaaaaaaaaaaaaaaaaaa s panTro5.chr19 36108997 7 + 61309027 ----------C----------------aaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855050 9 + 64411610 ----------C--------------aaaaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272774 12 - 8369475 ----------C-----------aaaaaaaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34628962 4 + 59248254 ----------C----------------AAC--- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496750 4 - 13342542 ----------C----------------AAC--- i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29234796 6 + 50890351 ----------C--------------Caaaa--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28528706 3 + 49145316 CC-------A----------------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372964 2 + 8899380 CC------------------------------- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 334520 10 - 4471408 Caaaaaaaaa----------------------- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 531009 64 + 2501019 I e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5445489 1006 + 5549422 I e mm10.chr7 111065240 62 - 145441459 I e canFam3.chr1 4587549 55 - 122678785 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I e colAng1.NW_012111697v1 2294247 36 + 4274983 I e manLeu1.NW_012102454v1 858337 23 - 2385121 I e cerAty1.NW_012005268v1 5427512 23 + 7714307 I e rheMac8.chr19 30176044 584 + 53671032 I e nomLeu3.chr10 63867520 93 - 106955855 I a score=215858.000000 s hg38.chr19_GL383574v1_alt 40395 67 + 155864 aaaaaaaaaaaaaGCGTATGCATTAAAAATACTAA-GGGggccaggcgcggtagctcacgcctgtgat s panTro5.chr19 36109004 67 + 61309027 aaaaaaaaaaaaaGCGTATGCATTAAAAATACTAA-GGGggccaggcgcggtagctcacgcctgtgat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855059 67 + 64411610 aaaaaaaaaaaaaGCGTATGCATTAAAAATACTAA-GGGggccaggcgcggtagctcacgcctgtgat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272786 67 - 8369475 aaaaaaaaaaaaaGCGTATGCATTAAAAATATTAA-GGGggccaggcgtggtagctcatgcctgtgat i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34628966 50 + 59248254 AACAACAAAAAAAGCATATGCATTAAAAATGTTAA-gggggccaggcgcgg----------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496754 50 - 13342542 AACAACAAAAAAAGCATATGCATTAAAAATGTTAA-gggggccaggcgcgg----------------- i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29234802 50 + 50890351 aaaaaaaaaaaaaGCACATGCATTAAAAACGTTAA-GGGGACCAGGTGCAg----------------- i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2294283 50 + 4274983 AAAAAAAAAAAAAGCATATGCATTAAAAATGTTAA-gggggccgggcgcgg----------------- i colAng1.NW_012111697v1 I 36 C 0 s calJac3.chr22 28528709 68 + 49145316 AAAAAAAAAAAAAGTGTATGCATTAAAAATGTTAAAGGGggccaggcatggtggctcatacctgtaat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5372966 68 + 8899380 AAAAAAAAAAAAAGTATATGCATTAAAAATGTTAAGGGGggccaggcaccgtggctcatacctgtaat i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 334530 68 - 4471408 aaaaaaaaaaaaaGCATATGCATTAAAAATGTTAAGGGGggccaggcatggtggctcatacctgtaat i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 531009 64 + 2501019 I e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5445489 1006 + 5549422 I e mm10.chr7 111065240 62 - 145441459 I e canFam3.chr1 4587549 55 - 122678785 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I e manLeu1.NW_012102454v1 858337 23 - 2385121 I e cerAty1.NW_012005268v1 5427512 23 + 7714307 I e rheMac8.chr19 30176044 584 + 53671032 I e nomLeu3.chr10 63867520 93 - 106955855 I a score=868956.000000 s hg38.chr19_GL383574v1_alt 40462 190 + 155864 gccagcactttgggaagccgaagcggatggatcacttgaggtcaggagttctagaccagtctggccaacatagtgaaaccccatctccgct----aaaaaaaaatacaaaaattagctgcgcatggtggcacacgcctgtaatcccagctgctcaggaggctgaggcaggagagtcgcttgaacccaagaggca s panTro5.chr19 36109071 188 + 61309027 gccagcactttgggaagccgaagcggatggatcacttgaggtcaggagttctagaccagtctggccaacatagtgaaaccccatctccgct------aaaaaaatacaaaaattagctgggtatggtggcacatgcctgtaatcccagctgctcaggaggctgaggcaggagagtcgcttgaacccaagaggca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855126 190 + 64411610 gccagcactatgggaagccgaagcggatggatcacttgaggtcaggagttctagaccagtctggccaacatagtgaaaccccatctccgct----aaaaaaaaatacaaaaattagctgggtatggtggcacatgcctgtaatcccagctgctcaggaggctgaggcaggagagtcgcttgaacccaagaggca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6272853 188 - 8369475 gccagcactttgggaagccgaagcagatggatcacttgaggtcaggagttctagaccagtctggccaacatagtgaaaccccatctccact------aaaaaaatacaaaaattagctgggcatggtggcacatgcctgtaatcccagctgctcaggaggctgaggcaggagagtcgcttgaacccaagaggca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867613 194 - 106955855 Gccagcactttgggaagctgaagcgggtggatcacttgaggtcaggagttctagaccagtctggccaacgtagtgaaactccatctctgctaaaaaaaaaaaaatacaaaaattagctgggcatggcggcacacacctgtaatctcagctactcaggaggctgaggcaggagagttgcttgaacccaagaggca i nomLeu3.chr10 I 93 C 0 s macFas5.chr19 34629016 165 + 59248254 ---------------------------tggatcacttgaggtcaggagttctagaccagtctgaccaacatagtgaaaccccatctccgct--aaaaaaaaaaatacaaaaattagctgggtgtggtggcacacgcctataatcccagctactcgggaggctaaggcaggagagtcgcttgaacccaagaggcg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496804 166 - 13342542 ---------------------------tggatcacttgaggtcaagggttctagaccagtctgaccaacatagtgaaaccccatctccgct-aaaaaaaaaaaatacaaaaattagctgggtgtggtggcacacgcctataatcccagctactcgggaggctaaggcaggagagtcgcttgaacccaagaggca i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29234852 165 + 50890351 ---------------------------tggatcacttgaggtcaggagttctagaccagtctgaccaacatagtgaaaccccatctccgct--aaaaaaaaaaatacaaaaattagctgggtgtggtggcacacacctataatcccagctactcaggaggctaaggcaggagagtcgcttgaacccaagaggcg i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2294333 162 + 4274983 ---------------------------tggatcacttgaggtcaggagttctagaccagtctggccaacatagtgaaaccccatctccgct-----aaaaaaaatacaaaaattagctgggcatggtggcacacgcctataatcccggctattcaggaggctgaggcaggagagtcgcttgaacccaagaggcg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528777 186 + 49145316 cccagcactttggtaggctgagacag-tggatcacttgaggtcaggaattctagactagcctggccaatatagtgaaaccccatctccact------tataaaatacaaagattagctgggcgtggtggcacacgcctgtaatctcagccactca-gaggctgaagcaggagaatctcttgaacccaggaggca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5373034 177 + 8899380 cccagcactttgggaggccgaggcag-tggatcacttgaggtcaggagttctggaccagcctggccaatatagtgaaatcccatctccgct------tataaaatacaaagataagc---------tggcacacacctgtgatctcagccattca-gaggctgaagcaggagaatctcttgaacccaggaggca i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 334598 186 - 4471408 cccagcactttgggaggccaagacag-tggatcacttgatgtcaggagttctagaccagcctggccaatatagtgaaaccccatctctgct------tataaaatacaaagattagctgggtgtggtggcacacacctgtaatctcagccactca-gaggctgaagcaggagaatctcttgaacgcaggaggca i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 531009 64 + 2501019 I e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5445489 1006 + 5549422 I e mm10.chr7 111065240 62 - 145441459 I e canFam3.chr1 4587549 55 - 122678785 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I e manLeu1.NW_012102454v1 858337 23 - 2385121 I e cerAty1.NW_012005268v1 5427512 23 + 7714307 I e rheMac8.chr19 30176044 584 + 53671032 I a score=455014.000000 s hg38.chr19_GL383574v1_alt 40652 63 + 155864 gaggttacagtgagccaagattgcgtcactgcactccagctggggcaacagaatgaaactcca s panTro5.chr19 36109259 63 + 61309027 gaggttacagtgagccaagattacgtcactgcactccagctggggcaacagaatgaaactcca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855316 63 + 64411610 gaggttacagtgagccaagattgcgtcactgcactccagctggggcaacagaatgaaactcca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273041 63 - 8369475 gaggttacagtgagccaagattgcgtcactgcactccagctggggcaacagaatgaaactcca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867807 63 - 106955855 gaggttacagtgagccaagattgcgtcactgcactccagctttgggcacagaatgagactcca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34629181 63 + 59248254 gaggttacagtgagccgagatcgcgccactgcactccaggctgggcaatagagtgagactcca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4496970 63 - 13342542 gaggttacagtgagccgagatcgcgccactgcactccagcctgggcaatagagtgagactcca i macNem1.NW_012011689v1 C 0 I 306 s cerAty1.NW_012005268v1 5427535 63 + 7714307 gaggttacagtgagccgagatcgcgccactgaactccagcctgggcaatagagtgagactcca i cerAty1.NW_012005268v1 I 23 C 0 s chlSab2.chr6 29235017 63 + 50890351 gaggttacagtgagccgagattgcgccactgcactccagcctgggcaatagagtgagactcca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858360 63 - 2385121 gaggttacagtgagccgagatcgcgccactgcactccagcctgggcaatagagtgagactcca i manLeu1.NW_012102454v1 I 23 C 0 s colAng1.NW_012111697v1 2294495 63 + 4274983 gaggttacagtgagccgagatcgcgccactgcactccagcctgggcaatagaatgagactcca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28528963 63 + 49145316 gaggttgcagtgaaccaagatcgcatcactgcactccagcctggtcaacagagtgagactcca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5373211 63 + 8899380 gaggttgcagtgaaccaagattgcatcactgtactccggcctggtcaacagagtgacgctcca i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 334784 63 - 4471408 gaggctgcagtgaaccaagatcgcatcactgcactccagcctggtcaacggagtgagactcca i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 531009 64 + 2501019 I e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5445489 1006 + 5549422 I e mm10.chr7 111065240 62 - 145441459 I e canFam3.chr1 4587549 55 - 122678785 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I e rheMac8.chr19 30176044 584 + 53671032 I a score=46135.000000 s hg38.chr19_GL383574v1_alt 40715 10 + 155864 tctc----aaaaaa s panTro5.chr19 36109322 10 + 61309027 tctc----aaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855379 10 + 64411610 tctc----aaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273104 10 - 8369475 tctc----aaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867870 10 - 106955855 tctc----aaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34629244 10 + 59248254 tctc----aaaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4497339 10 - 13342542 tctc----aaaaaa i macNem1.NW_012011689v1 I 306 C 0 s cerAty1.NW_012005268v1 5427598 10 + 7714307 tctc----aaaaaa i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29235080 9 + 50890351 tctc-----aaaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858423 10 - 2385121 tctc----aaaaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2294558 10 + 4274983 tctc----aaaaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529026 13 + 49145316 tctcaaaaaaaaa- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5373274 4 + 8899380 tctc---------- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 334847 9 - 4471408 tctc----aaaaa- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 531009 64 + 2501019 I e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5445489 1006 + 5549422 I e mm10.chr7 111065240 62 - 145441459 I e canFam3.chr1 4587549 55 - 122678785 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I e rheMac8.chr19 30176044 584 + 53671032 I a score=28525.000000 s hg38.chr19_GL383574v1_alt 40725 16 + 155864 aaagaaaaaaaataga s panTro5.chr19 36109332 16 + 61309027 aagaaaaaaaaataga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855389 15 + 64411610 aa-gaaaaaaaataga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273114 15 - 8369475 aa-gaaaaaaaataga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867880 13 - 106955855 aa---aagaaaataga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30176628 10 + 53671032 ------aaaaaaaaaa i rheMac8.chr19 I 584 I 6 s macFas5.chr19 34629254 10 + 59248254 ------taaaaataaa i macFas5.chr19 C 0 I 309 s macNem1.NW_012011689v1 4497349 10 - 13342542 ------aaaaaaaaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427609 10 + 7714307 ------aaaaaaaaaa i cerAty1.NW_012005268v1 I 1 C 0 s chlSab2.chr6 29235089 8 + 50890351 --------aaaaaaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858433 8 - 2385121 --------aaaaaaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2294568 6 + 4274983 --------aaaaga-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529039 16 + 49145316 aaaaaaaggaaaaaga i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5373278 13 + 8899380 ---aaaagaaaaaaga i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 334856 16 - 4471408 aaaaaaagaaaaaaga i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 531009 64 + 2501019 I e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5445489 1006 + 5549422 I e mm10.chr7 111065240 62 - 145441459 I e canFam3.chr1 4587549 55 - 122678785 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=14196.000000 s hg38.chr19_GL383574v1_alt 40741 2 + 155864 aa s panTro5.chr19 36109348 2 + 61309027 aa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855404 2 + 64411610 aa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273129 2 - 8369475 aa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867893 2 - 106955855 aa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30176644 2 + 53671032 aa i rheMac8.chr19 I 6 C 0 s chlSab2.chr6 29235097 2 + 50890351 aa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858441 2 - 2385121 aa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2294574 2 + 4274983 aa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529055 2 + 49145316 aa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5373291 2 + 8899380 aa i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 334872 2 - 4471408 aa i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4587604 2 - 122678785 AA i canFam3.chr1 I 55 C 0 e proCoq1.NW_012149263v1 531009 64 + 2501019 I e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5445489 1006 + 5549422 I e mm10.chr7 111065240 62 - 145441459 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I e cerAty1.NW_012005268v1 5427619 0 + 7714307 C e macNem1.NW_012011689v1 4497359 0 - 13342542 C e macFas5.chr19 34629264 309 + 59248254 I a score=10920.000000 s hg38.chr19_GL383574v1_alt 40743 1 + 155864 T s panTro5.chr19 36109350 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855406 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273131 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867895 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30176646 1 + 53671032 T i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4497359 1 - 13342542 T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427619 1 + 7714307 T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235099 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858443 1 - 2385121 T i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2294576 1 + 4274983 T i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529057 1 + 49145316 T i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5373293 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 334874 1 - 4471408 T i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 531073 1 + 2501019 T i proCoq1.NW_012149263v1 I 64 C 0 s canFam3.chr1 4587606 1 - 122678785 T i canFam3.chr1 C 0 C 0 e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5445489 1006 + 5549422 I e mm10.chr7 111065240 62 - 145441459 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I e macFas5.chr19 34629264 309 + 59248254 I a score=38352.000000 s hg38.chr19_GL383574v1_alt 40744 3 + 155864 GTT s panTro5.chr19 36109351 3 + 61309027 GTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855407 3 + 64411610 GTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273132 3 - 8369475 GTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867896 3 - 106955855 GTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30176647 3 + 53671032 GTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34629573 3 + 59248254 GTT i macFas5.chr19 I 309 C 0 s macNem1.NW_012011689v1 4497360 3 - 13342542 GTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427620 3 + 7714307 GTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235100 3 + 50890351 GTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858444 3 - 2385121 GTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2294577 3 + 4274983 GTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529058 3 + 49145316 GTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5373294 3 + 8899380 GTT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 334875 3 - 4471408 GTT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 531074 3 + 2501019 GTT i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4587607 3 - 122678785 GTT i canFam3.chr1 C 0 C 0 e micMur3.chr22 3937099 68 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5445489 1006 + 5549422 I e mm10.chr7 111065240 62 - 145441459 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=252492.000000 s hg38.chr19_GL383574v1_alt 40747 23 + 155864 AAGGGGT---TTACTTCCTTTAGGGT s panTro5.chr19 36109354 23 + 61309027 AAGGGGT---TTACTTCCTTTAGGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855410 23 + 64411610 AAGGGGT---TTACTTCCTTTAGGGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273135 23 - 8369475 AAGGGGT---TTACTTCCTTTAGGGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867899 23 - 106955855 AAGGGGT---TTACTTCCTTTAGGAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30176650 26 + 53671032 AAGGGGTTTATTACTTCCTTTAGGAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34629576 26 + 59248254 AAGGGGTTTATTACTTCCTTTAGGAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4497363 26 - 13342542 AAGGGGTTTATTACTTCCTTTAGGAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427623 23 + 7714307 AAGGGGT---TTACTTCCTTTAGGAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235103 23 + 50890351 AAGGGGT---TTACTTCCTTTAGGAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858447 23 - 2385121 AAGGGGT---TTACTTCTTTTAGGAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2294580 23 + 4274983 AAGGGGT---TTACTTCCTTTAGGAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529061 23 + 49145316 AAAGGGT---TTACTTCCTTGAGTCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5373297 23 + 8899380 AAAGGGT---TTACTTCCTCGAGTCT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 334878 23 - 4471408 AAAGGGT---TTACTTCCTCGAGTCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3937167 23 - 30143674 AAGGGGT---TTACTTCTTCTAGGAT i micMur3.chr22 I 68 C 0 s proCoq1.NW_012149263v1 531077 23 + 2501019 AAAGGGT---TTACTTCCTCTAGGAC i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4587610 23 - 122678785 AAGGGGT---TTACTCCCTCTAGGAC i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5445489 1006 + 5549422 I e mm10.chr7 111065240 62 - 145441459 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=45864.000000 s hg38.chr19_GL383574v1_alt 40770 3 + 155864 ACT s panTro5.chr19 36109377 3 + 61309027 ACT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855433 3 + 64411610 ACT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273158 3 - 8369475 ACT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867922 3 - 106955855 ACT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30176676 3 + 53671032 ACT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34629602 3 + 59248254 ACT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4497389 3 - 13342542 ACT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427646 3 + 7714307 ACT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235126 3 + 50890351 ACT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858470 3 - 2385121 ACT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2294603 3 + 4274983 ACT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529084 3 + 49145316 ATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5373320 3 + 8899380 ACT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 334901 3 - 4471408 ACT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3937190 3 - 30143674 ACT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 531100 3 + 2501019 ACT i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111065302 3 - 145441459 ACT i mm10.chr7 I 62 C 0 s canFam3.chr1 4587633 3 - 122678785 ACT i canFam3.chr1 C 0 I 134 e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5445489 1006 + 5549422 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=39251.000000 s hg38.chr19_GL383574v1_alt 40773 3 + 155864 CTT s panTro5.chr19 36109380 3 + 61309027 CTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855436 3 + 64411610 CTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273161 3 - 8369475 CTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867925 3 - 106955855 CTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30176679 3 + 53671032 CTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34629605 3 + 59248254 CTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4497392 3 - 13342542 CTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427649 3 + 7714307 CTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235129 3 + 50890351 CTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858473 3 - 2385121 CTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2294606 3 + 4274983 CTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529087 3 + 49145316 CTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5373323 3 + 8899380 CTT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 334904 3 - 4471408 CTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3937193 3 - 30143674 CTC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 531103 3 + 2501019 CTC i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111065305 3 - 145441459 CTT i mm10.chr7 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5445489 1006 + 5549422 I e canFam3.chr1 4587636 134 - 122678785 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=72956.000000 s hg38.chr19_GL383574v1_alt 40776 8 + 155864 T-AAATGAA s panTro5.chr19 36109383 8 + 61309027 T-AAATGAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855439 8 + 64411610 T-AAATGAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273164 8 - 8369475 T-AAATGAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867928 8 - 106955855 T-AAATGAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30176682 9 + 53671032 TAAAATGAA i rheMac8.chr19 C 0 I 4 s macFas5.chr19 34629608 9 + 59248254 TAAAATGAA i macFas5.chr19 C 0 I 4 s macNem1.NW_012011689v1 4497395 8 - 13342542 T-AAATGAA i macNem1.NW_012011689v1 C 0 I 4 s cerAty1.NW_012005268v1 5427652 8 + 7714307 T-AAATGAA i cerAty1.NW_012005268v1 C 0 I 4 s chlSab2.chr6 29235132 8 + 50890351 T-AAATGAA i chlSab2.chr6 C 0 I 4 s manLeu1.NW_012102454v1 858476 8 - 2385121 T-AAATGAA i manLeu1.NW_012102454v1 C 0 I 4 s colAng1.NW_012111697v1 2294609 8 + 4274983 T-AAATGAA i colAng1.NW_012111697v1 C 0 I 4 s calJac3.chr22 28529090 8 + 49145316 T-AAATGAA i calJac3.chr22 C 0 I 4 s saiBol1.JH378197 5373326 4 + 8899380 -----TGAA i saiBol1.JH378197 C 0 I 4 s aotNan1.NW_018505377v1 334907 8 - 4471408 T-AAATGAA i aotNan1.NW_018505377v1 C 0 I 4 s micMur3.chr22 3937196 8 - 30143674 T-AAATGAA i micMur3.chr22 C 0 I 181 s proCoq1.NW_012149263v1 531106 8 + 2501019 T-AAATGAA i proCoq1.NW_012149263v1 C 0 I 173 s otoGar3.GL873654 5446495 8 + 5549422 T-ATATAAT i otoGar3.GL873654 I 1006 C 0 s mm10.chr7 111065308 8 - 145441459 -GCCATGAA i mm10.chr7 C 0 I 4 e dasNov3.JH563638 284736 34 + 643850 I e canFam3.chr1 4587636 134 - 122678785 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=1035634.000000 s hg38.chr19_GL383574v1_alt 40784 106 + 155864 ATATGATGTTTCA-TATTCTC-TATTTGGAACTTCTGT-ATGGATGCAGACATTTTCAGAAATCTCCCAGG--ACAATGAACCTGAAACTTATGTATTTATAAGAAACTTG s panTro5.chr19 36109391 106 + 61309027 ATATGATGTTTCA-TATTCTC-TATTTGGAACTTCTGT-ATGGATGCAGACATTTTCAGAAATCTCCCAGG--ACAATGAACCTGAAACTTTTGTATTTATAAGAAACTTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855447 106 + 64411610 ATATGATGTTTCA-TATTCTC-TATTTGGAACTTCTGT-ATGGATGCAGACATTTTCAGAAATCTCCCAGG--Acaatgaacctgaaacttttgtatttataagaaacttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273172 106 - 8369475 ATATGATGTTTCA-TATTCTC-TATTTGGAACTTCTGT-ATGGATGCAGACATTTTCAGAAATCTCCCAGG--ACAATAAACCTGAAACTTTTGTATTTATAAGAAACTTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63867936 103 - 106955855 AT---ATGTTTCA-TATTCTC-TATTTGGAACTTCTGT-ATGGATGCAGACATTTTCAGAAATCTCCCAGG--Acaatgaacctgaaacttttgtatttataagaaacttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30176695 105 + 53671032 ATATGATGTTTCA-TATTCTC-TATTTGGAACTTCTCT-ATGGATGCAGACATTTTCAGAAATCTCCCAGG--ACAATGAACCTGAAACTTTTGTATTTATAAGAAACTT- i rheMac8.chr19 I 4 C 0 s macFas5.chr19 34629621 105 + 59248254 ATATGATGTTTCA-TATTCTC-TATTTGGAACTTCTCT-ATGGATGCAGACATTTTCAGAAATCTCCCAGG--ACAATGAACCTGAAACTTTTGTATTTATAAGAAACTT- i macFas5.chr19 I 4 C 0 s macNem1.NW_012011689v1 4497407 105 - 13342542 ATATGATGTTTCA-TATTCTC-TATTTGGAACTTCTCT-ATGGATGCAGACATTTTCAGAAATCTCCCAGG--ACAATGAACCTGAAACTTTTGTATTTATAAGAAACTT- i macNem1.NW_012011689v1 I 4 C 0 s cerAty1.NW_012005268v1 5427664 103 + 7714307 ATATGATGTTTCA-TATTCTC-TATTTGGAACTTCTCT-ATGGATGCAGACATTTTCAGAAATCTCCCAGG--ACAGTGAACCTGAAAC--TTGTATTTATAAGAAACTT- i cerAty1.NW_012005268v1 I 4 C 0 s chlSab2.chr6 29235144 105 + 50890351 ATATGATGTTTCA-TATTCTC-TATTTGGAACTTCTCT-ATGGATGCAGACATTTTCAGAAATCTCCCAGG--ACAATGAACCTGAAACTTTTGTATTTATAAGAAACTT- i chlSab2.chr6 I 4 C 0 s manLeu1.NW_012102454v1 858488 105 - 2385121 ATATGATGTTTCG-TATTCTC-TATTTGGAACTTCTCT-ATGGATGCAGACATTTTCAGAAATCTCCCAGG--Acagtgaacctgaaacttttgtatttataagaaactt- i manLeu1.NW_012102454v1 I 4 C 0 s colAng1.NW_012111697v1 2294621 105 + 4274983 ATATGATGTTTCA-TATTCTC-TATTTGGAACTTCTCT-ATGGATGCAGACATTTTCAGAACTCTCCCAGG--ACAATGAACCTGAAACTTTTATATTTATAAGAAACTT- i colAng1.NW_012111697v1 I 4 C 0 s calJac3.chr22 28529102 106 + 49145316 ATATGATGTTTCA-TATTCTC-TATTTGGAACATCTGT-ATGGATGCAGACATTTTCAGAATTCTCCCAGG--ACAATGAACCTGGAACTTACAAATTTATAAGAAACTTG i calJac3.chr22 I 4 C 0 s saiBol1.JH378197 5373334 106 + 8899380 ATATGATGTTTCA-TATTCTC-TATTTGGAACATCTGT-ATGGATGCAGACATTTTCAGAATTCTCCTAGG--ACAATGAACCAGAAACTTTCATATTTATAGGAAACTTG i saiBol1.JH378197 I 4 C 0 s aotNan1.NW_018505377v1 334919 106 - 4471408 ATATGATGTTTCA-TATTCTC-TATTTGGAACATCTGT-ATGGATGCAGACATTTTCAGAATTCTCCCAGG--ACAATGAACCTGGAACTTTCATATTTATAAGAAACTTG i aotNan1.NW_018505377v1 I 4 C 0 s otoGar3.GL873654 5446503 110 + 5549422 ATATGATCTATCAGTATTTCT-TACTTGGAGCTTTTGTAATGTATATGGACATTTTCAGAAATCTCCTAAGTTTCAGTGTATCTGAAACCTGATTATTCGTAAGAAACTCT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111065320 99 - 145441459 GTGTGATCTTTCA-AGCTTTCTTATTTGGAACATC-AC-ATGGATGCTGACATTTTCAGTAGT-TTCTAAG--ATAGTAATCATAAAACTAG------TATAAGAGACTTG i mm10.chr7 I 4 C 0 e proCoq1.NW_012149263v1 531114 173 + 2501019 I e micMur3.chr22 3937204 181 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e canFam3.chr1 4587636 134 - 122678785 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=94828.000000 s hg38.chr19_GL383574v1_alt 40890 9 + 155864 GGGATTTGG s panTro5.chr19 36109497 9 + 61309027 GGGATTTGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855553 9 + 64411610 gggatttgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273278 9 - 8369475 GGGATTTGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868039 9 - 106955855 gggatttgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30176800 9 + 53671032 GGGATTTGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34629726 9 + 59248254 GGGATTTGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4497512 9 - 13342542 GGGATTTGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427767 9 + 7714307 GGGATTTGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235249 9 + 50890351 GGGATTTGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858593 9 - 2385121 ggaatttgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2294726 9 + 4274983 GGGATTTGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529208 9 + 49145316 GGGATTTGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5373440 9 + 8899380 AGGATTTGG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 335025 9 - 4471408 GGGATTTGG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5446613 9 + 5549422 AGGAATTgg i otoGar3.GL873654 C 0 I 248 e proCoq1.NW_012149263v1 531114 173 + 2501019 I e micMur3.chr22 3937204 181 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111065419 0 - 145441459 C e canFam3.chr1 4587636 134 - 122678785 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=1825818.000000 s hg38.chr19_GL383574v1_alt 40899 258 + 155864 TTAttttatttacttattttgaaatagggtcttgctgtgtcacccaggctgcagtg--------cagccacgcttcagtacagcctcaatctcccaggctcaagcgat--cctcatacctcagcctccttatagctgggactacaggcatgcactacc-----------acacctggctaatttttaaaaatgttta----tttttttgtagagacagaacatcactg-tgttgctagggctggtct-------------------------------caaactcctgggctcaagcagtcctcccaccttgg-cc s panTro5.chr19 36109506 261 + 61309027 TTAttttatttacttattttgaaataggatcttgctgtgtcacccaggctgcagtg--------cagccacggttcagtacagcctcaatctcccaggctcaagcgat--cctcatacctcagcctccttatagctgggactacaggcatgcactacc-----------acacctggctaattttaaaaaatttttattt-tttttttgtagagacagaacatcactg-tgttgctagggctggtct-------------------------------cgaactcctgggctcaagcagtcctcccaccttgg-cc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855562 261 + 64411610 ttattttatttacttattttgaaatagggtcttgctgtgtcacccaggctgcagtg--------cagccacggttcagtacagcctcaatctcccaggctcaagcgat--cctcatacctcagcctccttatagctgggactgcaggcatgcactacc-----------acacctggctaatttt-aaaattttttatttatttttttgtagagacagaacatcactg-tgttgctagggctggtct-------------------------------cgaactcctgggctcaagcagtcctcccaccttgg-cc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273287 263 - 8369475 TTAttttatttacttattttgaaatagggtcttgctgtgtcacccaggctggagtg--------cagccacggttcagtacagcctcaatctcccaggctcaagcgat--cctcatacctcagcctccttatagctgggactacaggcatgcactacc-----------acacctggctaatttttaaaaatttttatttatttttttgtagagacagaatatcactg-tgttgctagggctggtct-------------------------------cgaactcctgggctcaagcagtcctcccaccttggccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868048 262 - 106955855 ttattttatttacttattttgaaatagggtcttgctgtgtcacccatgctggagtg--------cagccacggttcagtacagcctcaatctcccaggctcaagcgat--cctcatacctcagcctccttatagctgggactacaggcatgcactacc-----------acacctggctaatttttaaaaaattttatttatttttttgtagagacaggacatcacta-tgttgctagggctggtct-------------------------------tgaactcctgggctcaagcagtcctcccaccttgg-cc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30176809 272 + 53671032 TTAttttatttatttattttgaaatagggtcttgttctgtcacctaggctggagtgcaggagcacagccacggttcagtgcagcctcaatctcccagactcaagagatcccctcatacctcagcctccttatagctgggactacaggcgtacactacc-----------acacctggctaatttttttaatttgtttttttattttttgtagagacaggacatcacta-tgttgctagggctggtct-------------------------------tgaactcctgggctcaagcagtcctcccaccttga-cc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34629735 272 + 59248254 TTAttttatttatttattttgaaatagggtcttgttctgtcacctaggctggagtgcaggagcacagccacggttcagtgcagcctcaatctcccagactcaagagatcccctcatacctcagcctccttatagctgggactacaggtgtacactacc-----------acacctggctaatttttttaatttgtttttttattttttgtagagacaggacatcacta-tgttgctagggctggtct-------------------------------tgaactcctgggctcaagcagtcctcccaccttga-cc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4497521 272 - 13342542 TTAttttatttatttattttgaaatagggtcttgttctgtcacctaggctggagtgcaggagcacagccatggttcagtgcagcctcaatctcccagactcaagagatcccctcatacctcagcctccttatagctgggactacaggcgtacactacc-----------acacctggctaatttttttaatttttttttttattttttgtagagacaggacatcacta-tgttgctagggctggtct-------------------------------tgaactcctgggctcaagcagtcctcccaccttga-cc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5427776 272 + 7714307 TTAttttatttatttattttgaaatagggtcttgttctgtcacctaggctggagtgcaggagcacagccagggttcagtgcagcctcaatctcccagactcaagagatcccctcatacctcagcctccttatagctgggactacaggcgtatactacc-----------acacctggctaatttttttaatttgtttttttattttttgtagagacaggacatcacta-tgttgctagggctggtct-------------------------------tgaactcctgggctcaagcagtcctcccaccttga-cc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235258 272 + 50890351 TTAttttatttatttattttgaaatagggtcttgttctgtcacctaggctggagtgcaggagcacagccacggttcagtgcagcctcaatctcccagactcaagagatcccctcatacctcagcctccttatagctgggactacaggcgtacactacc-----------acacctggctaatttttttaatttggttttttattttttgtagagacaggacatcacta-tgttgctagggctggtct-------------------------------tgaactcctgggctcaagcagtcctcccaccttga-cc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858602 272 - 2385121 ttattttatttatttattttgaaatagggtcttgttctgtcacctaggctggagtgcaggagcacagccacggttcagtgcagcctcaatctcccagactcaagagatcccctcatacctcagcctccttatagctgggactacaggcatatactacc-----------acacctggctaatttttttaatttgtttttttattttttgtagagacaggacatcacta-tgttgctagggctggtct-------------------------------tgaactcctgggctcaagcagtcctcccaccttga-cc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2294735 272 + 4274983 TTAttttatttatttattttgaaatagggtcttgctctgtcgcctaggctggagtgcaggagcacagccacggttcagtgcagcctcaatctcccagactcaagagatccccttatacctcagcctccttatagctgggactacaggcgtgcactacc-----------acacctggctaattttttaaatttgtttttttattttttgtagagacaggacatcacta-tgttgctagggctgatct-------------------------------tgaactcctgggctcaagcagtcctctcaccttga-cc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529217 235 + 49145316 TTAttttat----ttgttttgaaacagggtcttgctctgtcacccaagctggagtgcagtggcacagccatggctcactgcagcctcaaccttccaggatcaagcaat--ccttccacctcagcctctttgtagctgggactacaggcATAATGTTTT-TAAAAATTAGACAGGTGTCtaatttttaaaaaaaaattt----ttttttGTAGAGATAGTACATCACTC-TGTTGCCAGGGCTGGCAT--------------------------------------------------------------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5373449 268 + 8899380 TTAttttat----ttgttttgaaacagggtcttgctctgtcgcccaagctggagtgcagtggcacagccacggctcactgcagcctcaaccttccaggatcaagcaat--ctttccacctcagcctccttgtagctgggactacaggcATAAtttttt-------------------------------------ttt----tttttttttgtgacggagtttcactcttgttacccaggctggagtgcaatggcgcgatctcggctcaccgcaacctccgcctcctgggttcaggcaattctcctgcctcag-cc i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 335034 233 - 4471408 TTAttttat----ttgttttgaaacaggg------tctgtcgcccaagctggagtgcagtggcacagccacggctcactacagcctcaacctcccaggatcaagcaat--ccttccaccttagcctccttgtagctgggactacagacataatttttttttaaaattagacacctggctaatttttttaaaaaatttttt-attttttgtagagatgggacatcactc-tgttgccagtgctggCAT--------------------------------------------------------------------- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 531114 173 + 2501019 I e micMur3.chr22 3937204 181 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5446622 248 + 5549422 I e mm10.chr7 111065419 0 - 145441459 C e canFam3.chr1 4587636 134 - 122678785 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=154761.000000 s hg38.chr19_GL383574v1_alt 41157 25 + 155864 tcccatagtgctgggattacaggc---a s panTro5.chr19 36109767 25 + 61309027 tcccatagtgctgggattacaggc---a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855823 25 + 64411610 tcccatagtgctgggattgcaggc---a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273550 25 - 8369475 tcccatagtgctgggattacaggc---g i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868310 28 - 106955855 tcccatagtgctgggattacaggcatga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177081 25 + 53671032 tcccagagtgctgggattataggc---g i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630007 25 + 59248254 tcccagagtgctgggattataggc---g i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4497793 25 - 13342542 tcccagagtgctgggattataggc---g i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428048 25 + 7714307 tcccagagtcctgggattacaagt---g i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235530 25 + 50890351 tcccagagtgctgggattacaggc---g i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858874 25 - 2385121 tcccagagtgctgggattacaggt---g i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295007 25 + 4274983 tcccagagtgctgggattacaggc---g i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529452 9 + 49145316 ----------------TTACAGAC---G i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5373717 25 + 8899380 tcctgaatagctgggattacaggc---a i saiBol1.JH378197 C 0 I 263 s aotNan1.NW_018505377v1 335267 9 - 4471408 ----------------TTACAGAC---A i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4587770 24 - 122678785 tcccagaaccctgggatcatgacc---- i canFam3.chr1 I 134 C 0 e proCoq1.NW_012149263v1 531114 173 + 2501019 I e micMur3.chr22 3937204 181 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5446622 248 + 5549422 I e mm10.chr7 111065419 0 - 145441459 C e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=134996.000000 s hg38.chr19_GL383574v1_alt 41182 17 + 155864 tgagcc---------------actgtgcctag s panTro5.chr19 36109792 17 + 61309027 tgagcc---------------actgtgcctag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855848 17 + 64411610 tgagcc---------------actgtgcctag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273575 17 - 8369475 tgagcc---------------actgtgcctag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868338 17 - 106955855 tgagcc---------------actgtgcccag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177106 17 + 53671032 tgagcc---------------actgtgcctag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630032 17 + 59248254 tgagcc---------------actgtgcctag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4497818 17 - 13342542 tgagcc---------------actgtgcctag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428073 17 + 7714307 tgagcc---------------actgtgcctag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235555 17 + 50890351 tgagcc---------------actgtgcctag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858899 17 - 2385121 tgagcc---------------actgtgcctag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295032 17 + 4274983 tgagcc---------------actgtgcctag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529461 17 + 49145316 TTAACC---------------ATTATCCTTAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374005 17 + 8899380 TGAGCC---------------ACTATCCTTAA i saiBol1.JH378197 I 263 C 0 s aotNan1.NW_018505377v1 335276 17 - 4471408 TGAGCC---------------ACTATCCTTAA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4587794 31 - 122678785 tgagccaaaagcagatatttaactgcgccac- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 531114 173 + 2501019 I e micMur3.chr22 3937204 181 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5446622 248 + 5549422 I e mm10.chr7 111065419 0 - 145441459 C e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=39576.000000 s hg38.chr19_GL383574v1_alt 41199 3 + 155864 ccA s panTro5.chr19 36109809 3 + 61309027 ccA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855865 3 + 64411610 cca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273592 3 - 8369475 ccA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868355 3 - 106955855 cca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177123 3 + 53671032 ccA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630049 3 + 59248254 ccA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4497835 3 - 13342542 ccA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428090 3 + 7714307 ccA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235572 3 + 50890351 ccA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858916 3 - 2385121 cca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295049 3 + 4274983 ccA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529478 3 + 49145316 CCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374022 3 + 8899380 CCA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 335293 3 - 4471408 CCA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5446870 3 + 5549422 CCA i otoGar3.GL873654 I 248 C 0 s canFam3.chr1 4587825 3 - 122678785 cca i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 531114 173 + 2501019 I e micMur3.chr22 3937204 181 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111065419 0 - 145441459 C e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=20727.000000 s hg38.chr19_GL383574v1_alt 41202 7 + 155864 ----------GAAATTG s panTro5.chr19 36109812 7 + 61309027 ----------GAAATTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855868 7 + 64411610 ----------gaaattg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273595 7 - 8369475 ----------GAAATTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868358 7 - 106955855 ----------gaaattg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177126 7 + 53671032 ----------GAAATTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630052 7 + 59248254 ----------GAAATTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4497838 7 - 13342542 ----------GAAATTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428093 7 + 7714307 ----------GAAATTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235575 7 + 50890351 ----------GAAATTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858919 7 - 2385121 ----------gaaattg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295052 7 + 4274983 ----------GAAATTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529481 5 + 49145316 ----------TAGTA-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374025 5 + 8899380 ----------TAGTA-- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 335296 5 - 4471408 ----------TAGTA-- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5446873 7 + 5549422 ----------GGAATTG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111065419 7 - 145441459 ----------GGAGTAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4587828 17 - 122678785 gatgcGCAgaggaattg i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 531114 173 + 2501019 I e micMur3.chr22 3937204 181 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e cebCap1.NW_016107633v1 1583086 1530 - 2680843 I a score=482401.000000 s hg38.chr19_GL383574v1_alt 41209 49 + 155864 -GCTTAAAATGCAGATTTTTGGACCCTGTCCCCAGCAAAAAG--------------ATTCGGTA-------- s panTro5.chr19 36109819 49 + 61309027 -GCTTAAAATGCAGATTTTTGGACCCTGTCCCCAGCAAAAAG--------------ATTCGGTA-------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855875 49 + 64411610 -gcttaaaatgcagatttttggaccctgtccccagCAAAAAG--------------ATTCGGTA-------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273602 49 - 8369475 -GCTTAAAATGCAGATTTTTGGACCCTGTCCCCAGCAAAAAG--------------ATTCGGTA-------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868365 49 - 106955855 -gcttaaaatgcagatttttggaccctgtccccagCAAAAAG--------------ATTCGGTA-------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177133 49 + 53671032 -GCTTAAAATGCAGATTTTTGGACCATGTCCCCAGCAAAAAG--------------ATTCAGTA-------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630059 49 + 59248254 -GCTTAAAATGCAGATTTTTGGACCATGTCCCCAGCAAAAAG--------------ATTCAGTA-------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4497845 49 - 13342542 -GCTTAAAATGCAGATTTTTGGACCCTGTCCCCAGCAAAAAG--------------ATTCAGTA-------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428100 49 + 7714307 -GCTTAAAATGCAGATTTTTGGACCCTGTCCCCAGCAAAAAG--------------ATTCAGTA-------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235582 49 + 50890351 -GCTTAAAATGCAGATTTTTGGACCCTGTCCCCAGCAAAAAG--------------ATTCAGTA-------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858926 49 - 2385121 -gcttaaaatgcagatttttggaccctgtccccagcaaaaag--------------attcagta-------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295059 49 + 4274983 -GCTTAAAATGCAGATTTTTGGACCCTGTCCCCAGCAAAAAG--------------ATTCAGTA-------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529486 50 + 49145316 -GCttaaaatgcagatttttggaccctgtcct---caataagt---ttt-------attcaata-------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374030 50 + 8899380 -GCTTAAAATGCAGATTTTTGGACCCTGTCTT---CAATAAGT---TTT-------ATTCAATA-------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1584616 50 - 2680843 -GCTTAAAATGCAGATTTTTGGACCCTGTGCT---CAATAAGT---TTT-------ATTCAATA-------- i cebCap1.NW_016107633v1 I 1530 C 0 s aotNan1.NW_018505377v1 335301 50 - 4471408 -GCttaaaatgcagatttttggaccctgtcct---caaaaagt---ttt-------attcaata-------- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5446880 51 + 5549422 -ATTTAAAGTGCCAATTTCTAGACTCTGTCCC---CAGAAAGTA--TTA-------ATTCATTA-------- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111065426 47 - 145441459 -CTTTCAAATGCAGA-TTCTGAATACTATTCT---CAGAGAGTA------------ATTTAATG-------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4587845 68 - 122678785 gttttaaaatgcagatttctggactct-tcct---cagaaagtctgtttcactggatttgaataggatccta i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 531114 173 + 2501019 I e micMur3.chr22 3937204 181 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I a score=134739.000000 s hg38.chr19_GL383574v1_alt 41258 9 + 155864 GAAATCTTT s panTro5.chr19 36109868 9 + 61309027 GAAATCTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855924 9 + 64411610 GAAATCTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273651 9 - 8369475 GAAATCTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868414 9 - 106955855 GAAATCTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177182 9 + 53671032 GAAATCTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630108 9 + 59248254 GAAATCTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4497894 9 - 13342542 GAAATCTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428149 9 + 7714307 GAAATCTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235631 9 + 50890351 GAAATCTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858975 9 - 2385121 gAAATCTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295108 9 + 4274983 GAAATCTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529536 9 + 49145316 gAAATCTTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374080 9 + 8899380 GAAATCTTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1584666 9 - 2680843 GAAATCTTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 335351 9 - 4471408 gAAATCTTC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 531287 9 + 2501019 gaagtctTC i proCoq1.NW_012149263v1 I 173 C 0 s otoGar3.GL873654 5446931 9 + 5549422 GGAATTTTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111065473 9 - 145441459 GAGTTCTTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4587913 9 - 122678785 gaaatcttt i canFam3.chr1 C 0 C 0 e micMur3.chr22 3937204 181 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I a score=3078656.000000 s hg38.chr19_GL383574v1_alt 41267 195 + 155864 ATTCGTAGCCAGTTTACTGTGTTGCAGGTGGTCCCCAGTTTAACTTTGAGTAATGCTG--TCTTCATTGTTAAAATAATCAGATTTAATTATATGGTAGATATTTTAGGTAACTAGGGTATTTCAAGCTGTCCCATGGGGCTGAGTAGCTGGCAGCTGCTTGACTTGGCTTC-TAGAGGACTTACTGCTCAGCAAGGT s panTro5.chr19 36109877 195 + 61309027 ATTTGTAGCCAGCTTACTGTGTTGCAGGTGGTCCCCAGTTTAACTTTGAGTAATGCTG--TCTTCATTGTTAAAATAATCAGATTTAATTATATGGTAGATATTTTAGGTAACTAGGGTATTTCAAGCTGTCCCATGGGGCTGAGTAGCTGGCAGCTGCTTGACTTGGCTTC-TAGAGGACTTACTGCTCAGCAAGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39855933 195 + 64411610 ATTTGTAGCCAGCTTACTGTGTTGCAGGTGGTCCCCAGTTTAACTTTGAGTAATGCTG--TCTTCATTGTTAAAATAATCAGATTTAATTATATGGTAGATATTTTAGGTAACTAGGGTATTTCAAGCTGTCCCATGGGGCTGAGTAGCTGGCAGCTGCTTGACTTGGCTTC-TAGAGGACTTACTGCTCAGCAAGGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273660 195 - 8369475 ATTCGTAGCCAGCTTACTGTGTTGCAGGTGGTCCCCAGTTTAACTTTGAGTAATGCTG--TCTTCATTGTTAAAATAATCAGATTTAATTATATGGTAGATATTTTAGGTAACTAGGGTATTTCAAGCTGTCCCATGGGGCTGAGTAGCTGGCAGCTTCTTGACTTGGCTTC-TAGAGGACTTACTGCTCTGCAAGGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868423 195 - 106955855 ATTTGTAGCCAGCTTACTGTGTTGCAGGTGGTCCCCAGTTTAACTTTGAGTAATGCTG--TCTTCATTGTTAAAATAATCAGATTTAATTATATGGTAGATATTTTAGGTAACTAGGGTGTTTCAGGCTGTCCCATGGGGCTGAGTAGCTGGCAGCTGCTCGGCTTGGCTTC-TAGAGGACTTACTGCTCAGCAAGGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177191 195 + 53671032 ATTTGTAGCCAGCTTACTGTGTTGCAGGTGGTCCCTGGTTTAACTTTGAGTAATGCTA--TCTTCATTGTTAAAATAATCAGATTTAATTATATGGTAGATATTTTAGGTAACTAGGGTATTTCAGGCTGTCCCATGGGCCTGAATAGCTGGCAGCTACTCGGCTTGGCTTC-TAGAGGACTTACTGCTCAGCAAGGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630117 195 + 59248254 ATTTGTAGCCAGCTTACTGTGTTGCAGGTGGTCCCTGGTTTAACTTTGAGTAATGCTA--TCTTCATTGTTAAAATAATCAGATTTAATTATATGGTAGATATTTTAGGTAACTAGGGTATTTCAGGCTGTCCCATGGGCCTGAATAGCTGGCAGCTACTCGGCTTGGCTTC-TAGAGGACTTACTGCTCAGCAAGGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4497903 195 - 13342542 ATTTGTAGCCAGCTTACTGTGTTGCAGGTGGTCCCTGGTTTAACTTTGAGTAATGCTA--TCTTCATTGTTAAAATAATCAGATTTAATTATATGGTAGATATTTTAGGTAACTAGGGTATTTCAGGCTGTCCCATGGGCCTGAATAGCTGGCAGCTACTTGGCTTGGCTTC-TAGAGGACTTACTGCTCAGCAAGGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428158 195 + 7714307 ATTTGTAGCCAGCTTACTGTGTTGCAGGTGGTCCCTGGTTTAACTTTGAGTAATGCTA--TCTTCATTGTTAAAATAATCAGATTTAATTATGTGGTAGATATTTTAGGTAACTAGGGTATTTCAGGCTGTCCCATGGGCCTGAATAGCTGGCAGCTACACGGTTTGGCTTC-TAGAGGACTTACTGCTCAGCAAGGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235640 195 + 50890351 ATTTGTAGCCAGCTTACTGTGTTGCAGGTGGTCCCTGGTTTAACTTTGAGTAATGCTG--TCTTCACTGTTAAAATAATCAGATTTAATTATATGGTAGATATTTTAGGTAACTAGGGTATTTCAGGCTGTCCCATGGGCCTGAATAGCTGGCAGCTACTTGGCTTGGCTTC-TAGAGGACTTACTGCTCAGCAAGGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 858984 195 - 2385121 ATTTGTAGCCAGCTTACTGTGTTGCAGGTGGTCCCTGGTTTAACTTTGAGTAATGCTA--TCTTCATTGTTAAAATAATCAGATTTAATTATGTGGTAGATATTTTAGGTAACTAGGGTATTTCAGGCTGTCCCATGGGCCTGAATAGCTGGCAGCTACTCGGTTTGGTTTC-TAGAGGACTTACTGCTCAGCAAGGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295117 195 + 4274983 ATTTTTAGCCAGCTTACTGTGTTGCAGGTGGTCCCTGGTTTAACTTTGAGTAATGCTA--TCTTCATTGTTAAAATAATCAGATTTAATTATGTGGTAGATATTTTAGGTAACTAGGGTATTTCAGGCTGTCCCATGGGCCTGAATAGCTGGCAGCTACTTGGCTTGGCTTC-CAGAGGACTTACTGCTCAGCAAGGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529545 194 + 49145316 ATTTGTAGCCAGCTTACTGTGTTGCAGGTGGTCCCCAGTTTAGCTTTGAGTAATGCTA--TCTTCGTTGTTAAAATAATCAGATTTAATTATATGGTTGATATTTTAGACAACTAGGATATTTTAGGCTGTCCCATGGGGCTGAATAGCTGGCAGCTGTTTGACTTGGCTTC-TAGAGGACTTACTGCTCAGCAAAT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374089 194 + 8899380 ATTTGTAGCCAGCTTACTATGTTGCAGGTGGTTGCCAGTTTAGCTTTGAGTAATGTTA--TCTTCGTTGTTAAAATAATCAGATTTAATTATATGGTTGATATTTTAGATAACTAGGATATTTTAGGCTGTCCTACGGGGCTGAATAGCTGGCAGCTGTTTGGCTTGGCTTC-TAGAGGACTTACTGCTCAGCAAAT- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1584675 194 - 2680843 ATTTGTAGCCAGCTTACTGTGTTGCAGGTGGTCCCCAGTTTAGCTTTGAGTAATGCTA--TCTTCGTTGTTAAAATAATCAGATTTAATTATATGGTTGGTATTTTAGATAACTAGGATATTTTAGGCTATCCCATGGGGCTGAATAGCTGGCAGCTGTTTGGCTTGGCTTC-TAGAGGACTTACTGCTCAGCAAAT- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 335360 194 - 4471408 ATTTGTAGCCAGCTTACTGTGTTGCAGGTGTTCCCCAGTTTAGCTTTGAGTAATGCTA--TCTTCATTGTTAAAATAATCAGATTTAATTATATGGTTGATATTTTAGATAACTAGGATATTTTAGGCTGTCCCATGGGGCTGAATAGCTGGCAGCGATTTGGCTTGGCTTC-TAGAGGACTTACTGCTCAGCAAAT- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3937385 195 - 30143674 atttgtagccagttcactatgttgcaggtggtccatggtttaactttgaATAATGCTA--TCTTCAGTGTTAAAATAATCATATTTAATTATACAGTAGATATTTTAGGTAACTAGGGCATTTCAGGCCGTCCCATGGGGCTGAATAGCTGACAGCTGCTCAGCTTGGCTTC-TAGAGGACTTACTGCCCACCAAGGT i micMur3.chr22 I 181 C 0 s proCoq1.NW_012149263v1 531296 197 + 2501019 ATTTGTAGCCAATTCACTATGTTGCAGGTGGTCCATGGTTTAACTTTGAATAATGCTATGTCTTCAGTGTTAAAATAATCAGATTTAATTATACAGTAGATATTTTAGGTAACTAGGGCATTTCACGCTGTCCCATGGGGCTGAATAGCTGACAGCTGCTCAGCTTGGCTTC-TGGAGGTCTTACTGCTCATCAAGGT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5446940 194 + 5549422 ATTTGTAGCCAGTTCACTATATTGCAGGTGGTCCACAGTTTAACTTTGAGTAACGCTG--TCTTCAGTGTT-AAATAATCAGATTTAATTATGAGATAGATATTTTAGGTAACTAGGGCATTTCAGGCTGTCCCATGGGGCTGAATAGCTGACAGCTGCTCAGCTCAGCTTC-TGCAGGACTTACTGCTCACCGAGGT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111065482 169 - 145441459 ATTTATACCTAGCTTACTTTATTGCATGTAAAACACAGTTTAACTTTGATTAATTCCA--TCTTCAGTGTT-AAATACTGAGAGTTAATTGAGCA-CAGCTATTTTAGGTAAC--AGTCATTTTAATCTTGCCCGTGGA----------------------AACTCAGCTTC-TGGAAGACTTACTGTTCACAAAGGC i mm10.chr7 C 0 C 0 s canFam3.chr1 4587922 192 - 122678785 ----ttagccagcttaccctggtacaactggtccgcagtttaacgttgagTAATGCTC--TCTTAAGTGTTGAAATAATCAGATTTAATTATGAGATAGGTATTTTAGGTAACTAGGGCATTTCAGGCTGTCCCCTGGGGCTGAATACCTGACAGCTGTTTGGCTTGGCTTCTTAGAGGACCTACTACTCACTGAGAT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I a score=42422.000000 s hg38.chr19_GL383574v1_alt 41462 8 + 155864 AAATGTTA s panTro5.chr19 36110072 8 + 61309027 AAATGTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856128 8 + 64411610 AAATGTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273855 8 - 8369475 AAATGTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868618 8 - 106955855 AAATGTTA i nomLeu3.chr10 C 0 C 0 s macNem1.NW_012011689v1 4498098 5 - 13342542 AAA---TA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428353 5 + 7714307 AAA---TA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235835 5 + 50890351 AAA---TA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 859179 5 - 2385121 AAA---TA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295312 5 + 4274983 AAA---TA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529739 8 + 49145316 AAATGTTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374283 8 + 8899380 AACTATTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1584869 8 - 2680843 AAATGTTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 335554 8 - 4471408 AAATGTTA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3937580 8 - 30143674 AAATGTTA i micMur3.chr22 C 0 I 155 s proCoq1.NW_012149263v1 531493 8 + 2501019 AAATGTTA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5447134 6 + 5549422 AAAGAT-- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111065651 8 - 145441459 AAATGTTA i mm10.chr7 C 0 C 0 s canFam3.chr1 4588114 8 - 122678785 AGATGTTC i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I e macFas5.chr19 34630312 0 + 59248254 C e rheMac8.chr19 30177386 0 + 53671032 C a score=749893.000000 s hg38.chr19_GL383574v1_alt 41470 79 + 155864 TTAATACCTTCATTGC--TCTCTGTGTCCCAAAGGTCAA-TACCCAAACTTTGAGA-TTTTGTAGACTGGAGGAATCTTTGTC s panTro5.chr19 36110080 79 + 61309027 TTAATACCTTCATTGC--TCTCTGTGTCCCAAAGGTCAA-TACCCAAACTTTGAGA-TTTTGTAGACTGGAGGAATCTTTGTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856136 79 + 64411610 TTAATACCTTCATTGC--TCTCTGTGTCCCAAAGGTCAA-TACCCAAACTTTGAGA-TTTTGTAGACTGGAGGAATCTTTGTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273863 79 - 8369475 TTAATACCTTCATTGC--TCTCTGTGTCCGAAAGGTCAA-TACCCAAACTTTGAGA-TTTTGTAGACTGGAGGAATCTTTGTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868626 79 - 106955855 TTAATACCTTCATTGC--TCTCTGTGTCCCAAAGGTCAA-TACCCAAACTTTGAGA-TTTTGTAGACTGGAGGAATCTTTGTC i nomLeu3.chr10 C 0 C 0 s macNem1.NW_012011689v1 4498103 79 - 13342542 TTAATACCTTCATTGC--TCTCTGTGTCCCAAAGATCAG-TACCCAAACTTTGAGA-TTTTGTAGACTGGAAAAATCTTTGTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428358 79 + 7714307 TTAATACCTTCATTGC--TCTCTGTGTCCCAAAGATCAG-TACCCAAACTTTGAGA-TTTTGTAGACTGGAAAAATCTTTGTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235840 79 + 50890351 TTAATACCTTCATTGC--TCTCTGTGTCCCAAAGATCAG-TACCCAAACTTTGAGA-TTTTGTAGACTGGAAAAATCTTTGTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 859184 79 - 2385121 TTAATACCTTCATTGC--TCTCTGTGTCCCAAAGATCAG-TACCCAAACTTTGAGA-TTTTGTAGACTGGAAAAATCTTTGTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295317 77 + 4274983 CTAATACCTTCATTGC--TCTCTGTGTCCCAAAGATAAG-TACCCAAAC--TGAGA-TTTTGTAGACTGGAAAAATCTTTGTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529747 79 + 49145316 TGAATACCTTCATTGG-TTCTCTGTGTCCCAAAGACCAA-TACCTAAACTTTGAGA-TTTTGCAGACTGGAAAAATC-TTGTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374291 80 + 8899380 TGAATACCTTCATTGC-TTCTCTGTGTCCCAAAGACCAA-TAcccaaactttgaga-ttttgtagactggaaaaatctttgtc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1584877 80 - 2680843 TGAATACCTTCATTGC-TTCTCTGTGTCCCAAAGACCAA-TACCCAAACTTTGAGA-TTTTGTAGACTGGAAAAATCTGTGCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 335562 80 - 4471408 TGAATGCCTTCATTGC-TTCTCTGTGTCCCAAAGACCAA-TACCCAAACTTTGAGA-TTTTGTAGACTGGAAAAATCTTTGTC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 531501 75 + 2501019 -------CTTCATTGTCTTCTCTTTGTCCCAAAGCTCAA-TTCCCAAACTTTGGGATTTTTGTGGACTGGAAAAATCTTTGTC i proCoq1.NW_012149263v1 C 0 I 85 s otoGar3.GL873654 5447140 78 + 5549422 ----TACCCTCATTGTCTTTTCTTTGTCACAAAGCTCAA-TTCTCAAACTTCAGGATTTTTGTGGACTGGAAAAGTCTTTGTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111065659 64 - 145441459 ------CCTTCACTGGTTTCTTCTTGCCTTAAA--------ACTTAAACTTTGAG--TTTTATATACTAGAAAATTGTTG--- i mm10.chr7 C 0 C 0 s canFam3.chr1 4588122 75 - 122678785 ------CTTTTGTTGTCTTCTCTTAATCCAAAAGCTCAATTTCCCAAACTTTGGGA-TTTTGTGGACGGGGTAAACTTCACT- i canFam3.chr1 C 0 C 0 e micMur3.chr22 3937588 155 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e macFas5.chr19 34630312 0 + 59248254 C e rheMac8.chr19 30177386 0 + 53671032 C a score=358137.000000 s hg38.chr19_GL383574v1_alt 41549 47 + 155864 ------TCCCACTCCTTCCC--CAAGAAA---gacatggg-ttgct-a-a-tttttattttg s panTro5.chr19 36110159 47 + 61309027 ------TCCCACTCCTTCCC--CAAGAAA---gacatagg-ttgct-a-a-tttttattttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856215 47 + 64411610 ------TCCCACTCCTTCCC--CAAGAAA---GACATAGG-TTGCT-A-A-TTTTTATTTTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273942 47 - 8369475 ------TCCCACTCCTTCCC--CAAGAAA---GACATAGG-TTGCT-A-A-TTTTTATTTTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868705 47 - 106955855 ------TCCCCCTCCTTCCC--CAAGAAA---GACATAGG-TTGCT-A-A-TTTTTATTTTG i nomLeu3.chr10 C 0 C 0 s macNem1.NW_012011689v1 4498182 47 - 13342542 ------TCCCCATCCCTCCC--CAAGAAA---gacatagg-ttgct-a-a-tttttattttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428437 47 + 7714307 ------TCCCCATCCCTCCC--CAAGAAA---gacatagg-ttgct-a-a-tttttattttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235919 46 + 50890351 ------T-CCCATCCCTCCC--CAAGAAA---gacatagg-ttgct-a-a-tttttattttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 859263 47 - 2385121 ------TCCCCATCCCTCCC--CAAGAAA---gacatagg-ttgct-a-a-tttttattttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295394 47 + 4274983 ------TCCCCATCCCTCCC--TAAGAAA---gacatagg-ttgct-a-a-tttttattttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529826 46 + 49145316 ------TTACCCTCCCTCCA---AAGAAA---GACTTAGG-TTTCT-A-A-TTTTTATTTTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374371 46 + 8899380 ------tcaccctccctcca---aagaaa---gacatagg-ttgct-a-a-tttttattttg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1584957 46 - 2680843 ------TCACCCTCCCTCCA---AAGAAA---gacatagg-ttgct-a-a-tttttattttg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 335642 46 - 4471408 ------TCACCCTCCCTCCA---AAGAAA---gacatggg-ttgct-a-a-tttttattttg i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5447218 50 + 5549422 --------ACCCTCCTACTAT-CGAGAAATATGACATAGG-TTACCAA-A-TTTTTATTTTG i otoGar3.GL873654 C 0 I 829 s mm10.chr7 111065723 50 - 145441459 ---------CCACCCCTCCCCGCAAGAACTATGATGTAAA-TGATC-AGA-TCTTTATTTTG i mm10.chr7 C 0 C 0 s canFam3.chr1 4588197 58 - 122678785 TGCCATTCCACCCCCCACAA--CAAGAAATCTCacataagtttgcc-a-attttttattttg i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 531576 85 + 2501019 I e micMur3.chr22 3937588 155 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e macFas5.chr19 34630312 0 + 59248254 C e rheMac8.chr19 30177386 0 + 53671032 C a score=155645.000000 s hg38.chr19_GL383574v1_alt 41596 17 + 155864 tcgaatgaggacattaa s panTro5.chr19 36110206 17 + 61309027 ttgaatgaggacattaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856262 17 + 64411610 TTGAATGAGGACATTAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6273989 17 - 8369475 TTGAATGAGGACATTAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868752 17 - 106955855 TTGAATGAGGACATTAA i nomLeu3.chr10 C 0 C 0 s macNem1.NW_012011689v1 4498229 17 - 13342542 ctgaatgagaacattaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428484 17 + 7714307 ctgaatgagaacattaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235965 17 + 50890351 ctgaatgagaacattaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 859310 17 - 2385121 ctgaatgagaacattaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295441 17 + 4274983 ctgaatgagaacattaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529872 17 + 49145316 CTGAATGAGGACATTAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374417 17 + 8899380 ctgaatgaggacttgaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1585003 17 - 2680843 ctgaatgaggacattaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 335688 17 - 4471408 ctgaatgaggacattaa i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111065773 17 - 145441459 CTAAATGAAAACACTAA i mm10.chr7 C 0 C 0 s canFam3.chr1 4588255 17 - 122678785 ctgaatgatcacgttaa i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 531576 85 + 2501019 I e micMur3.chr22 3937588 155 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5447268 829 + 5549422 I e macFas5.chr19 34630312 0 + 59248254 C e rheMac8.chr19 30177386 0 + 53671032 C a score=13923.000000 s hg38.chr19_GL383574v1_alt 41613 1 + 155864 a s panTro5.chr19 36110223 1 + 61309027 a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856279 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274006 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868769 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177386 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630312 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4498246 1 - 13342542 a i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428501 1 + 7714307 a i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235982 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 859327 1 - 2385121 a i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295458 1 + 4274983 a i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529889 1 + 49145316 A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374434 1 + 8899380 a i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1585020 1 - 2680843 a i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 335705 1 - 4471408 a i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111065790 1 - 145441459 A i mm10.chr7 C 0 C 0 s canFam3.chr1 4588272 1 - 122678785 a i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 531576 85 + 2501019 I e micMur3.chr22 3937588 155 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5447268 829 + 5549422 I a score=61880.000000 s hg38.chr19_GL383574v1_alt 41614 5 + 155864 aaTAA s panTro5.chr19 36110224 5 + 61309027 aaTAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856280 5 + 64411610 AATAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274007 5 - 8369475 AATAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868770 5 - 106955855 AATAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177387 5 + 53671032 AATAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630313 5 + 59248254 AATAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4498247 5 - 13342542 aataa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428502 5 + 7714307 aaTAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235983 5 + 50890351 aataa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 859328 5 - 2385121 aaTAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295459 5 + 4274983 aaTAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529890 5 + 49145316 AATAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374435 5 + 8899380 aataa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1585021 5 - 2680843 aaTAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 335706 5 - 4471408 aaTAA i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111065791 5 - 145441459 AATAA i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 531576 85 + 2501019 I e micMur3.chr22 3937588 155 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5447268 829 + 5549422 I e canFam3.chr1 4588273 0 - 122678785 C a score=1030637.000000 s hg38.chr19_GL383574v1_alt 41619 108 + 155864 GTTAACCGTGAgccaggcacagtggcttaggcctttcatcccagcac-attgagaggctaaagcaggaagatcacttgaggccaggagttcaagaccagcctgtgcaaa s panTro5.chr19 36110229 108 + 61309027 GTTAACCGTGAgccaggcacagtggcttaggcctttcatcccagcac-attgagaggctaaagcaggaagatcacttgaggccaggagttcaagaccagcctgtgcaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856285 108 + 64411610 GTTAACCGTGAgccaggcacagtggcttaggcctttcatcccagcac-attgagaggctaaagcaggaagatcacttgaggccaggagttcaagaccagcctgtgcaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274012 108 - 8369475 GTTAACCGTGAgccaggcacagtggcttaggcctttcatcccagcac-attgagaggctaaagcaggaagatcacttgaggccaggagttcaagaccagcctgtgcaga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868775 108 - 106955855 ATTAACTGTGAgccaggcacagtggcttaggcctttaatcccagcac-attgagaggctgaagcaggaagatcacttgaagccaggagttcaagaccaccctgtgcaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177392 108 + 53671032 ATTAACAGTGAgccaggcacaatggcacaggcctgtaatcccagcac-tttgagagactgaagcaggaagatctcttgaggccaggagttcaagaccagcctgtgcaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630318 108 + 59248254 ATTAACAGTGAgccaggcacaatggcacaggcctgtaatcccagcac-tttgagagactgaagcaggaagatctcttgaggccaggagttcaagaccagcctgtgcaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4498252 108 - 13342542 attaacagtgagccaggcacaatggcacaggcctgtaatcccagcac-tttgagagactgaagcaggaagatctcttgaggccaggagttcaagaccagcctgtgcaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428507 108 + 7714307 ATTAACAGTGAgccaggcacaatggcacaggcctgtaatcccagcac-tttgagagactgaagcaggacgatctcttgaggccaggagttcaagaccagcctgtgcaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29235988 108 + 50890351 attaacagtgagccaggcacaatggcacaggcctgtaatcccagcac-tttgagagactgaagcaggaagatctcttgaggccaggagttcaagaccagcctgtgcaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 859333 108 - 2385121 ATTAACAGTGAgccaggcacaatggcacaggcctgtaatcccagcac-tttgagagactgaagcaggacgatctcttgaggccaggagttcaagaccagcctgtgcaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295464 109 + 4274983 ATTAACGGTGAgccaggcacaatggcataggcctgtaatcccagcacttttgagagactgaagcaggaagatcacttgaggccaggagttcaagaccagcctgtgcaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28529895 107 + 49145316 ATTAACAGTGAgccaggcagagtggctcaggcctgtaat-ccagcag-tttgagaggacgaagcaggaagattacttgaggccaggagttcaagaccagtctgtgcaaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374440 107 + 8899380 attaacagtgagccaggcacagtggctcaggcctgtaat-ccagcag-tttgagaggccgaagcaggaagattatttaaggccaggagttcaagaccagtctgtgcaaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1585026 107 - 2680843 ATTAACAGTGAgccaggcacagtggctcaggcctgtaat-ctagcag-tttgagaggccaaagcaggaagattatgtgaggccaggagttcaagaccagtctgtgcgaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 335711 107 - 4471408 ATTAACAGTGAgccaggcacagtggctcaggcctgtaat-ccagcag-tttgagagggcaaagcaggaagattacttgaggccaggagttcaagaccagtctgtacaaa i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 531576 85 + 2501019 I e micMur3.chr22 3937588 155 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5447268 829 + 5549422 I e mm10.chr7 111065796 0 - 145441459 C e canFam3.chr1 4588273 0 - 122678785 C a score=306859.000000 s hg38.chr19_GL383574v1_alt 41727 36 + 155864 atagcaagacctcatctctactaaaaaat-aaaaaaa s panTro5.chr19 36110337 36 + 61309027 atagtaagacctcatctctactaaaaaat-aaaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856393 36 + 64411610 atagtaagacctcatctctactaaaaaat-aaaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274120 35 - 8369475 atagcaagacctcatctctactaaaaaat--aaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868883 35 - 106955855 atagcaagacctcatctctactaaaaaat--aaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177500 36 + 53671032 atagcaaaacctcatctctactaaaaaat-aaaaaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630426 36 + 59248254 atagcaaaacctcatctctactaaaaaat-aaaaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4498360 37 - 13342542 atagcaaaacctcatctctactaaaaaataaaaaaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428615 36 + 7714307 atagcaaaacctcatctctactaaaacat-aaaaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29236096 36 + 50890351 atagcaaaacctcatctctactaaaaaat-aaaaaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 859441 36 - 2385121 atagcaaagcctcatctctactaaaacat-aaaaaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295573 35 + 4274983 atagcaaaacctcatctctactaaaa-at-aaaaaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530002 34 + 49145316 atagcaagactttatctctactaaaacat---aaaat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374547 35 + 8899380 atagcaagacctcatctctactaaaacat--aaaaat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1585133 35 - 2680843 atagcaagacttcatctctactaaaacat--aaaaat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 335818 35 - 4471408 atagcaagacctaatctctcctaaaagat--aaaaat i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111065796 15 - 145441459 ATAGCA---------------------AT-GAAAAAA i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 531576 85 + 2501019 I e micMur3.chr22 3937588 155 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5447268 829 + 5549422 I e canFam3.chr1 4588273 0 - 122678785 C a score=1382478.000000 s hg38.chr19_GL383574v1_alt 41763 149 + 155864 gttagctgggcttagtggcacatgcctgtggtcccagctacgtgggaggttgagatagaaggatcgcctgagcccgggaagctgaggctgcaggaagccatgaccacaccactgcactccagcctaggggacagagacccagtctc-aTC s panTro5.chr19 36110373 149 + 61309027 gttagctgggcttagtggcacatgcctgtggtcccagctacatgggaggttgagatagaaggatcgcctgagcccgggaagctgaggctgcaggaagccatgaccacaccactgcactccagcctaggggacagagacccagtctc-aTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856429 149 + 64411610 gttagctgggcttagtggcacatgcctgtggtcccagctacatgggaggttgagagagaaggatcgcctgagcccgggaagctgaggctgcaggaagccatgaccacaccactgcactccagcctaggggacagagacccagtctc-aTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274155 148 - 8369475 gttagctgggcttagt-gcacatgcctgtggtcccagctacatgggaggttgagatagaaggatcgcctgagcctgggaagctgaggctgcaggaagccatgaccacaccactgcactccagcctaggggacagagacccagtctc-aTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63868918 149 - 106955855 atcagctgggcttaatggcacatgcctgtggtcccagctacatgggaggttgagatagaaggatcgcctgagcccgggaaactgaggctgcaggaagccatgaccacaccactgcactccagcctaggggacagagatccagtctc-aTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177536 149 + 53671032 attagctgggcttagtggcacatacctgtggtcctagctacacgggatgttgagatggaaggattgcctgagcctgggaaacggaggctgcaggaagccgtgaccacaccactgcactccagcctgggatacagagacccaggctc-atc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630462 149 + 59248254 attagctgggcttagtggcacatacctgtggtcctagctacacgggatgttgagatggaaggattgcctgagcccgggaaacggaggctgcaggaagccgtgaccacaccactgcactccagcctgggatacagagacccaggctc-atc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4498397 149 - 13342542 attagctgggcttagtgacacatacctgtggtcctagctacacgggatgttgagatggaaggattgcctgagcccaggaaacggaggctgcaggaagccgtgaccacaccactgcactccagcctgggatacagagacccaggctc-ctc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428651 148 + 7714307 attagctgggcttagtggcacatacctgtggtcccagctacatgggatgttgagatggaagga-tgcctgagtccgggaaacggaggctgcaggaagccatgaccacaccactgcactccagcctgggttacagagacccaggctc-aTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29236132 149 + 50890351 attagctgggcttagtggcacatacctgtggtcccagctacatgggatgttgagatggaaggattgcctgagcccgggaaacggaggctgcaggaagccatgaccacaccactgcactccagcctgggatacagagacccaggctc-atc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 859477 149 - 2385121 attagctgggcttagtggcacatacctgtggtcccagctacatgggatgttgagatggaaggattgcctgagcccgggaaacggaggctgcaggaagccatgaccacaccactgcactccagcctgggatacagagacccaggctc-aTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295608 149 + 4274983 attagctgggcttagtggcacatacctgtggtcccagctacatgggatgctgaaatagaaggattgcctgagcccgggaaactgaggctacaggaagccatgaccataccattgcactccagccggggggacagagACGCAGGCTC-ATC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530036 146 + 49145316 attagctgggcttaatggcacatgcccctggtcccagctacatgggaggctaagatggaagaatcgcctgagcccaggaaactgaggctgcaggaagccatgaccataccacttcactccagtctgggagacag----cctgtctcaata i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374582 146 + 8899380 attagctgggcttaatggcacatgcctctggtcccagctacatgggaggctgagatgaaggaatcgcctgagcccaggaaactcaggctgtaggaagccatgaccacaccacttcactccagtctgggcgacag----cctgtctcaata i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1585168 146 - 2680843 attagctgggcttaatggcacatgcctctggtcccagctacatgggaggctgagatggaagaatcgcctgagcccaggaaactgaggctgcaggaagccatgaccacaccacttcactccagtctgggtgacag----cctgtctcaata i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 335853 146 - 4471408 attagctgggcttaatggcacatgcctctggtcccagctacatgggaggctgagatggaagaatcacctgagcccaggaaactgaggctgcaggaagccatgaccacaccgcttcactccagtctggacaacag----cttgtctcaata i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 531576 85 + 2501019 I e micMur3.chr22 3937588 155 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5447268 829 + 5549422 I e mm10.chr7 111065811 0 - 145441459 C e canFam3.chr1 4588273 0 - 122678785 C a score=140861.000000 s hg38.chr19_GL383574v1_alt 41912 14 + 155864 AATAAATAAATAAT s panTro5.chr19 36110522 14 + 61309027 AATAAATAAATAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856578 14 + 64411610 AATAAATAAATAAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274303 14 - 8369475 AATAAATAAATAAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869067 14 - 106955855 AATAAATAAATAAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177685 14 + 53671032 aataaataaataaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630611 14 + 59248254 aataaataaataaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4498546 14 - 13342542 aataaataaataaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428799 14 + 7714307 AATAGATAAATAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29236281 14 + 50890351 aataaataaataat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 859626 14 - 2385121 AATAAATAAATAAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295757 14 + 4274983 AATAAATAAATAAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530182 14 + 49145316 aaTGGGTAAATAAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374728 14 + 8899380 aacagataaataat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1585314 14 - 2680843 aaTAGGTAAATAAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 335999 14 - 4471408 aaTAGGTAAGTAAT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4588273 14 - 122678785 aataaatcaacaat i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 531576 85 + 2501019 I e micMur3.chr22 3937588 155 - 30143674 I e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5447268 829 + 5549422 I e mm10.chr7 111065811 0 - 145441459 C a score=4809.000000 s hg38.chr19_GL383574v1_alt 41926 1 + 155864 G s panTro5.chr19 36110536 1 + 61309027 G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856592 1 + 64411610 G i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274317 1 - 8369475 G i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869081 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177699 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630625 1 + 59248254 t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4498560 1 - 13342542 t i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428813 1 + 7714307 G i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29236295 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 859640 1 - 2385121 G i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295771 1 + 4274983 G i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530196 1 + 49145316 G i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374742 1 + 8899380 a i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1585328 1 - 2680843 G i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 336013 1 - 4471408 G i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3937743 1 - 30143674 G i micMur3.chr22 I 155 C 0 s proCoq1.NW_012149263v1 531661 1 + 2501019 g i proCoq1.NW_012149263v1 I 85 C 0 s canFam3.chr1 4588287 1 - 122678785 g i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I e otoGar3.GL873654 5447268 829 + 5549422 I e mm10.chr7 111065811 0 - 145441459 C a score=34580.000000 s hg38.chr19_GL383574v1_alt 41927 2 + 155864 AA s panTro5.chr19 36110537 2 + 61309027 AA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856593 2 + 64411610 AA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274318 2 - 8369475 AA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869082 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177700 2 + 53671032 aa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630626 2 + 59248254 aa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4498561 2 - 13342542 aa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428814 2 + 7714307 AA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29236296 2 + 50890351 aa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 859641 2 - 2385121 AA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295772 2 + 4274983 AA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530197 2 + 49145316 AA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374743 2 + 8899380 aa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1585329 2 - 2680843 AA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 336014 2 - 4471408 AA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3937744 2 - 30143674 AA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 531662 2 + 2501019 aa i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5448097 2 + 5549422 AA i otoGar3.GL873654 I 829 C 0 s canFam3.chr1 4588288 2 - 122678785 aa i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I e mm10.chr7 111065811 0 - 145441459 C a score=612055.000000 s hg38.chr19_GL383574v1_alt 41929 38 + 155864 AGGACA-----TTTTAACAC-----CCCACTACAA----CCACTAAAGATAC s panTro5.chr19 36110539 38 + 61309027 AGGACA-----TTTTAACAC-----CCCACTACAA----CCACTAAAGATAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856595 38 + 64411610 AGGACA-----TTTTAACAC-----CCCACTACAA----CCACTAAAGATAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274320 38 - 8369475 AGGACA-----TTTTAACAC-----CCCACTACAG----CCACTAAAGATAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869084 38 - 106955855 AGGACA-----TTTTAACAC-----CCCACTACAA----CCACTGAAGAGAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177702 38 + 53671032 aGGACA-----TTTTAACAC-----CTCACTACAA----CCACTAAAGATAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630628 38 + 59248254 aGGACA-----TTTTAACAC-----CTCACTACAA----CCACTAAAGATAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4498563 38 - 13342542 aggaca-----ttttaacac-----ctcactacaa----ccactaaagatac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428816 38 + 7714307 AGGACA-----TTTTAACAC-----CTCACTACAA----CCACTAAAGATAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29236298 38 + 50890351 aggaca-----ttttaacac-----ctcactacaa----ccactaaagatac i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 859643 38 - 2385121 AGGACA-----TTTTAACAC-----CTCACTACAA----CCACTAAAGATAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295774 38 + 4274983 AGGACA-----TTTTAACAC-----CTCACGACAA----CCACTAAAGATAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530199 38 + 49145316 AGGACA-----TTTTAATAC-----CCCACTACAA----CCACTAAAGATAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374745 38 + 8899380 aggaca-----ttttaatac-----catactacaa----ccactaaagatac i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1585331 38 - 2680843 AGGACA-----TTTTAATAC-----CCCACTACAA----CCACTAAAGATAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 336016 38 - 4471408 AGGACA-----TTTTAATAC-----CCCACTACAA----CCACTAAAGATTC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3937746 38 - 30143674 AGGATA-----TTTTAACAC-----CTCTCCACAG----CCACCAAAGATAT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 531664 38 + 2501019 aggata-----ttttaacac-----ctcaccacaa----ccaccgaagatat i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5448099 38 + 5549422 AGGATA-----TTTTAACAC-----CTCACCACAA----CCACCAAAAATAT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111065811 42 - 145441459 AGGACA-----TTTTCATAC-----CTTACCACAAACAGCCACCAAAAATAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4588290 48 - 122678785 agaacagacatttttaacacctcctctcaccacaa----ccactaaagataa i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 284736 34 + 643850 I a score=225792.000000 s hg38.chr19_GL383574v1_alt 41967 16 + 155864 AAATAAATAAAAATAT s panTro5.chr19 36110577 16 + 61309027 AAATAAATAAAAATAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856633 16 + 64411610 AAATAAATAAAAATAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274358 16 - 8369475 AAATAAATAAAAATAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869122 16 - 106955855 AAATAAATAAGAATAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177740 16 + 53671032 AAATAAATAAAAATAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630666 16 + 59248254 AAATAAATAAAAATAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4498601 16 - 13342542 aaataaataaaaatat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428854 16 + 7714307 AAATAAATAAAAATAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29236336 16 + 50890351 aaataaataaaaatat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 859681 16 - 2385121 AAATAAATAAAAATAT i manLeu1.NW_012102454v1 C 0 I 302 s colAng1.NW_012111697v1 2295812 16 + 4274983 AAATAAATAAAAATGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530237 16 + 49145316 AAATAAATAAAAATAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374783 11 + 8899380 aaat-----aaaatac i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1585369 16 - 2680843 AAATAAATAAAAATAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 336054 16 - 4471408 AAATAAATAAAAATAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3937784 16 - 30143674 AAATAAATACACATGT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 531702 16 + 2501019 aaataaatacaaatgt i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5448137 11 + 5549422 AAATAAA-----ATGC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111065853 11 - 145441459 AAGTAAA-----ATGT i mm10.chr7 C 0 C 0 s canFam3.chr1 4588338 16 - 122678785 aaataaataaaaatgt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 284770 16 + 643850 AGACGAGGAAAAATGT i dasNov3.JH563638 I 34 C 0 a score=127306.000000 s hg38.chr19_GL383574v1_alt 41983 10 + 155864 ---AAGAGGAACA s panTro5.chr19 36110593 10 + 61309027 ---AAGAGGAACA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856649 10 + 64411610 ---AAGAGGAACA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274374 10 - 8369475 ---AAGAGGAACA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869138 10 - 106955855 ---AAGAGGAACA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177756 10 + 53671032 ---AAGAGGAGCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630682 10 + 59248254 ---AAGAGGAGCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4498617 10 - 13342542 ---aagaggagca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5428870 10 + 7714307 ---AAGAGGAGCA i cerAty1.NW_012005268v1 C 0 I 310 s chlSab2.chr6 29236352 10 + 50890351 ---aagaggagca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 859999 10 - 2385121 ---aaGAGGAGCA i manLeu1.NW_012102454v1 I 302 C 0 s colAng1.NW_012111697v1 2295828 10 + 4274983 ---AAGAGGAGCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530253 10 + 49145316 ---GAGAGGAACA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374794 10 + 8899380 ---aagaagaaca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1585385 10 - 2680843 ---GAGAGTAACA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 336070 10 - 4471408 ---GAGAGGAACA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3937800 10 - 30143674 ---AGAAAGAACA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 531718 10 + 2501019 ---agaaagaacg i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5448148 10 + 5549422 ---AGAAAGAACA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111065864 7 - 145441459 ------GAGAACA i mm10.chr7 C 0 C 0 s canFam3.chr1 4588354 10 - 122678785 ---aggaagaaca i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 284786 10 + 643850 GGCAGGAGGA--- i dasNov3.JH563638 C 0 C 0 a score=5206101.000000 s hg38.chr19_GL383574v1_alt 41993 324 + 155864 CAACCTCATA---ATACAGA-------TAGTCTTTT----ATATTGCATATAT-TTAACT---TCGGGCAAAAGCCACTC-TATTTTCCTC---TTTA-----AAAAAAC---TT----TTTTAGCTATAGATTAATGAATACTTTCTCA-----GACA-TTTCAGAACTACTGCTTA---GTACTTGAAATACAACATTTAG--AATCTGGGGTA-----CTACCTGAATGTGATGAGTAGTCACACATCTCATATCCTTTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCGACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATATTCCGTGGGAGTGACATTAAAG s panTro5.chr19 36110603 324 + 61309027 CAACCTCATA---ATACAGA-------TAGTCTTTT----ATATTGCATATAT-TTAACT---TCGGGCAAAAGCCACTC-TATTTTCCTC---TTTA-----AAAAAAC---TT----TTTTAGCTATAGATTAATGAATACTTTCTCA-----GACA-TTTCAGAACTACTGCTTA---GTACTTGAAATACAACATTTAG--AATCTGGGGTG-----CTACCTGAATGTGATGAGTAGTCACACATCTCATATCCTTTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCGACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATATTCCGTGGGAGTGACATTAAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856659 324 + 64411610 CAACCTCATA---ATACAGA-------TAGTCTTTT----ATATTGCATATAT-TTAACT---TCGGGCAAAAGCCACTC-TATTTTCCTC---TTTA-----AAAAAAC---TT----TTTTAGCTATAGATTAATGAATACTTTCTCA-----GACA-TTTCAGAACTACTGCTTA---GTACTTGAAATACAACATTTAG--AATCTGGGGTA-----CTACCTGAATGTGATGAGTAGTCACACATCTCATATCCTTTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCGACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATATTCCGTGGGAGTGACATTAAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274384 322 - 8369475 CAACCTCATA---ATACAGA-------TAGTCTTTT----ATATTGCATATAT-TTAACT---TCGGGCAAAAGCCACTC-TATTTTCCTC---TTT------AAAAAAC---TT----TTTTAGCTATAGATTAATGAATACTTTCTCA-----GACA-TTTCAGAACTACTGCTTA---GTACTTGAAATACAACATTTAG--AATCTGGGGTA-----CTACCTGAATGTGATGAGTAGTCACACATCTCATATCC-TTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCGACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATATTCCGTGGGAGTGACATTAAAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869148 324 - 106955855 CAACCTCATA---ATACTGA-------TAGTCTTTT----ATATTGCATATAT-TTAACT---TAAGGCAAAAGCCACTC-TACTTTCCTC---TTTA-----AAAAAAT---TG----TTTTAGCTATAGATTAATGAATACTTCCTCA-----GACA-TTTCAGAACTACTGTTTA---GTACTTGAAATACAACATTTAG--AATCTGGGGTA-----CTACCTTAATGTGATGAGTAGTCACACATCTCATATCCTTTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCAACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATATTCCGTGGGAGTGACATTAAAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30177766 324 + 53671032 CAACCTTGTA---ATACTGA-------TAGTCTTTT----ATATTGCGTATAT-TTAACT---TCAGGCAAAACCCACTC-TATTTTCCTC---TTTT-----AAAAAAA---TT----ATTTAGCTATAGATTAATGAATACTTTCTCA-----GACA-TTTCAGAACTACTGCTTA---GTACTTGAAATACAACACTTAG--AATCTGGGGTA-----CTACCTGAATGTAATGAGTAGTCACACATCTCATATCCTTTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCGACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATATTCCGTGGGAGTGACATTAAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34630692 324 + 59248254 CAACCTTGTA---ATACTGA-------TAGTCTTTT----ATATTGCGTATAT-TTAACT---TCAGGCAAAACCCACTC-TATTTTCCTC---TTTT-----AAAAAAA---TT----ATTTAGCTATAGATTAATGAATACTTTCTCA-----GACA-TTTCAGAACTACTGCTTA---GTACTTGAAATACAACACTTAG--AATCTGGGGTA-----CTACCTGAATGTAATGAGTAGTCACACATCTCATATCCTTTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCGACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATATTCCGTGGGAGTGACATTAAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4498627 324 - 13342542 caacctcgta---atactga-------tagtctttt----atattgcgtatat-ttaact---tcaggcaaaacccactc-tattttcctc---tttt-----aaaaaaa---tt----atttagctatagattaatgaatactttctca-----GACA-TTTCAGAACTACTGCTTA---GTACTTGAAATACAACACTTAG--AATCTGGGGTA-----CTACCTGAATGTAATGAGTAGTCACACATCTCATATCCTTTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCGACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATATTCCGTGGGAGTGACATTAAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5429190 324 + 7714307 CAACCTCGTA---ATACTGA-------TAGTCTTTT----ATATTGCATATAT-TTAACT---TCAGGCAAAACCCACTC-TATTTTCCTC---TTTT------AAAAAA---TT----ATTTAGCTATAGATTAATGAATACTTTCTCA-----GACACTTTCAGAACTACCGCTTA---GTACTTGAAATACAACACTTAG--AATCTGGGGTA-----CTACCTGAATGTAGTGAGTAGTCACACATCTCATATCCTTTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCGACAGATCGTCCAATACCACCTCGAGATGAAGTATTTGAATAACATTATATTCCGTGGGAGTGACA-TAAAG i cerAty1.NW_012005268v1 I 310 C 0 s chlSab2.chr6 29236362 324 + 50890351 caacctcgta---atactga-------tagtctttt----atattgcgtatat-ttaact---tcaggcaaaacccactc-tattttcctc---tttt-----aaaaaaa---tt----atttagctatagattaatgaatactttctca-----GACA-TTTCAGAACTACTGCTTA---GTACTTGATATACAACACTTAG--AATCTGGGGTA-----CTACCTGAATGTAATGAGTAGTCACACATCTCATATCCTTTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCGACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATATTCCGTGGGAGTGACATTAAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 860009 324 - 2385121 CAACCTCGTA---ATACTGA-------TAGTCTTTT----ATATTGCATATAT-TTAACT---TCAGGCAAAACCCACTC-TATTTTCCTC---TTTT-----AAAAAAA---TT----ATTTAGCTATAGATTAATGAATACTTTCTCA-----AACA-TTTCAGAACTACTGCTTA---GTACTTGAAATACAACACTTAG--AATCTGGGGTA-----CTACCTGAATGTAGTGAGTAGTCACACATCTCATATCCTTTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCGACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATATTCCGTGGGAGTGACATTAAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2295838 325 + 4274983 CAACCTCGTA---ATACTGA-------TAGTCTTTT----ATATTGCGTATAT-TTAACT---TCAGGCAAAACCCACTCTTATTTTCCTC---TTTT-----AAAAAAA---TT----ATTTAGCTATAGGTTAATGAATACTTTCTCA-----GACA-TTTCAGAACTACTGCTTA---GTACTTGAAATACAACACTTAG--AATCTGGGGTA-----CTACCTGAATGTAATGAGTAGTCACACATCTCATATCCTTTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCGACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATATTCCGTGGGAGTGACATTAAAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530263 321 + 49145316 CAACCTCATA---ATACTGA-------TAGTCTTTT----ATTTTCCATATAT-TTAACT---TCAGATAAAACCTACTC-TATTTTCCTC---TTTT-----AAAAAAA---TT----ACTTAGCTATGGATGAATGAGTACTTTCTCA-----GACA-CTTCA-AACTACTGC--A---GAACCTGAAATATAACACTATA--AATCTGGGGTA-----GTACTTGAATTTGATGAGTAGTCACACATCTCACATCCTTTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCAACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ATATTATATTCCGTGGGAGTGACATTAAAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5374804 323 + 8899380 caacctcata---atactga-------tagtctttt----attttccatatat-ttaagt---tcagataaaacctactc-tattttcctc---tttt-----aaaaaaa---tt----atttagctatggatgaatgaatactttctca-----caca-cTTCA-AACTACTGCTTA---GTACCTGAAATATAACACTTAA--AATCTGGGGTA-----CTACTTGAATATGATGAGTAGTCACACATCTCACATCCTTTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCAACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATATTCCGTGGGAGCGACATTAAAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1585395 327 - 2680843 CAATCTCATA---ATAGTGA-------TAGTCTTTT----ATTTTCCGTATAT-TTAACT---TCAGATAAAACCTACTC-TATTTTCCTC----TTT-----AAAAAAA---TT----ATTTAGCTATGGATGAATGAATACTTTCTCA-----GACA-CTTCA-AACTACTGCTTA---GTACCTGAAATATAACACTTAA--AATCTGGGGTACTACTGTACTTGAATTTGATGAGTAGTCACACATCTGACATCCTTTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCAACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATATTCCGTGGGAGTGACATTAAAG i cebCap1.NW_016107633v1 C 0 M 1430 s aotNan1.NW_018505377v1 336080 330 - 4471408 CAACCTCATA---ATACTGATTTTTGGTAGTCTTTT----ATTTTCTGTATAT-TTAACT---TTAGATCAAACCTACTC-TATTTTCCTC---TTTT-----AAAAAAA---TC----GTTTAGCTATGGATGAATGAATACTTTCTCA-----GACA-CTTCA-AACTACTGCTTA---GTACCTGAAATATAACACACAA--AATCTGGGGTA-----CTACTTGAATTTGATGAGTCGTCACACATCTCACATCCTTTGTTTTCTTGCCAGTTCGATCCTTTGGTACAGAAGACAGACCAACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATATTCCGTGGGAGTGACATTAAAG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3937810 337 - 30143674 CGACCTGTTA---ATACTGA-------TCGTGTTTT----ACATTGCATATAT-TTAGCT---TTAGGCAACACCCACTC-TATTTTCTTCTTTTTTT-----AAAAAAAGTTTT----ATTTAGCTGTAGGTTAATGAATACTTTCACACAGATGACA-TTTCAGAACTGTTGCTTA---GTACTTGGAATAGAACAATTATACAATCTGAGGCA-----CTACTTGAATATGATGAGTAGTCATGCATCTCATATCCTTTATTTTCTTACCAGTTCGATCCTTTGGTACAGAAGACAGACCAACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATCATTTTCCGAGGGAGTGATATTAAAG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 531728 334 + 2501019 cgacctctta---atactga-------ttgtatttt----acattgcgtacat-ttagct---ttaggcaacacccactc-tattttcttc-tttttT-----AAAAAAAGTTTT----ATTTAGCTGTAGGTTAATGAATACCTTCACACAGATGACA-CCTCAGAATTGTTGCCTA---GTACTTGGAATAGAACAATTAG--AATCTGAGGCA-----CTACTTGAATATGATGAGTAGTCATACATCTCGTATCCTCTATTTTCTTACCAGTTCGATCCTTTGGTACAGAAGACAGACCAACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATTTTCCGAGGGAGTGATATTAAAG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5448158 335 + 5549422 CAACCTCATA---ATACCAA-------TAGACTTTTTTAAAAACAGCGTACAT-TTAGCT---TTAGGCAACACCCACTC-TTGTTTCTTC-TTTTTT-----AAAATAAGTTTT----ATTTAGCTGTAGGTTAATGACTACTTTCACACAGATGACA-TTTCAGAACTGTTGCTTA---GTGCTTAGAATAGAACAATTAG--AATCTGAGGTA-----CTACATCAGTATGTTGAGTA-TCAT--ATCTCATATCCTCTGTTTTTTTACCAGTTCGATCCTTTGGTACCGAGGACAGACCAACTGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ACATTATTTTCCGTGGGAGTGATATTAAAG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111065871 295 - 145441459 CAACCTCATG---ACAC----------TAGACTTTT----AAGTGAAATACATGCTGATTTGATTGAGCAAAATGTGTTC-TATTTTACTC---TTTT-----AAAAATA----------TTTGACCATATGGTAATAAGTACTTTCTTATGAACGGTG-TTTGAGAACTGATGGTTG---ATATTTG------------TAT--AGT---GAGTA----------------------GCAAACATGTGTCTCATGTCTTCTCTTTTCTTACCAGTTCGATCCTTCGGTACAGAAGACAGACCAACAGATCGTCCAATACCGCCTCGAGATGAAGTCTTTGAAT-ATATTATATTCCGCGGGAGTGATATTAAAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4588364 328 - 122678785 gcacttcata---atacaga-------ttgtctttt----aaattgagtactt-ttagct---ctaggcaaaacccactc-tattttcctc---ttttttttAAACAAAA---TT----TTTAATCTACAGAT---TGAGTATTTTCTCACAGATGACA-TTTAAGAACTGCTGTTTATTGATACTTGGAAGATTGCATTTCT--AA------GAG-----ACACCTGAATATGATGAGTATACATATATCTCACATCCTTTGTTTTCTCACCAGTTCGGTCCTTTGGTACAGAAGACAGACCAACAGATCGTCCAATACCACCTCGCGATGAAGTCTTTGAAT-ACATCATATTCCGTGGGAGTGATATTAAAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 284796 317 + 643850 ---CCTTTAACAGATACAGA-------TCGTCTTTG----AAATTGAGTACAT-TTGGTT---TTAGGCAAAACCCAGTT-TCCTTTTTTT---TTTT---------------TTTTCAATTTACCAACCTATTAGTGAATACTTTCTCATAGATGACA-TTT---GATAGCTGCTTA---GTACTTGGAACAGTGCACTTGT--A---TAAGGCA-----TGATCTGGATATGATAAGTAGACATACACCTCGT---CTCTGTTTTCTCACCAGTTCGATCCTTTGGTACAGAAGACAGACCTACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT-ATATTATATTCCGTGGAAGTGATATAAAAG i dasNov3.JH563638 C 0 C 0 a score=2141484.000000 s hg38.chr19_GL383574v1_alt 42317 139 + 155864 ACCTTACTGTTTGTGAGCCACCAAAACCACAGTGTTCTTTGCCTCAAGACC--CAGCTATTGTTCAGGTAACTGATGGT-AAATTT--G--TCTT--GGAGTACAGGTAAACTCCG--CAC-AGGGTTAGCCTT----------------GGCTTTTTTCTCTCT--AG s panTro5.chr19 36110927 139 + 61309027 ACCTTACTGTTTGTGAGCCACCAAAACCACAGTGTTCTTTGCCTCAAGACC--CAGCTATTGTTCAGGTAACTGATGGT-AAATTT--G--TCTT--GGAGTACAGGTAAACTCCG--CAC-AGGGTTAGCCTT----------------GGCTTTTTTCTCTCT--AG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39856983 139 + 64411610 ACCTTACTGTTTGTGAGCCACCAAAACCACAGTGTTCTTTGCCTCAAGACC--CAGCTATTGTTCAGGTAACTGATGGT-AAATTT--G--TCTT--GGAGTACAGGTAAACTCCG--CAC-AGGGTTAGCCTT----------------GGCTTTTTTCTCTCT--AG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274706 139 - 8369475 ACCTTACTGTTTGTGAGCCACCAAAACCACAGTGTTCTTTGCCTCAAGACC--CAGCTATTGTTCAGGTAACTGATGGT-AAATTT--G--TCTT--GGAGTACAGGTAAACTCCG--CAC-AGGGTTAGCCTT----------------GGCTTTTTTCTCTCT--AG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869472 139 - 106955855 ACCTTACTGTTTGTGAGCCGCCAAAACCACAGTGTTCTTTGCCTCAAGACC--CAGCTATTGTTCAGGTAACTGATGGT-AAATTT--G--TCTT--GGAGTACAGGTAAACTCCG--CAC-AGGGTTAGCCTT----------------GGCTTTTTTCTCTCT--AG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30178090 139 + 53671032 ACCTTACTGTTTGTGAGCCACCAAAACCACAGTGTTCTTTGCCTCAAGACC--CAGCTATCGTTCAGGTAACTGATGGT-AAATTT--G--TCTT--GGAGTACAGGTAAACTCCA--CAC-AGGGATAGCCTT----------------GGCTTTTTTCTTTCC--AG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631016 139 + 59248254 ACCTTACTGTTTGTGAGCCACCAAAACCACAGTGTTCTTTGCCTCAAGACC--CAGCTATCGTTCAGGTAACTGATGGT-AAATTT--G--TCTT--GGAGTACAGGTAAACTCCA--CAC-AGGGATAGCCTT----------------GGCTTTTTTCTCTCC--AG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4498951 139 - 13342542 ACCTTACTGTTTGTGAGCCACCAAAACCACAGTGTTCTTTGCCTCAAGACC--CAGCTATCGTTCAGGTAACTGATGGT-AAATTT--G--TCTT--GGAGTACAGGTAAACTCCA--CAC-AGGGATAGCCTT----------------GGCTTTTTTCTCTCC--AG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5429514 144 + 7714307 ACCTTACTGTTTGTGAGCCACCAAAACCACAGTGTTCCTTGCCTCAAGACCAGCAGCTATCGTTCAGGTAACTGATGGT-AAATTT--GGTCCTT--GGAGTACAGGTAAACTCCA--CACAAGGGATAGCCTT----------------GGCTTTTTTCTCTCC--AG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29236686 139 + 50890351 ACCTTACTGTTTGTGAGCCACCAAAACCACAGTGTTCTTTGCCTCAAGACC--CAGCTATCGTTCAGGTAACTGATGGT-AAATTT--G--TCTT--GGAGTACAGGTAAACTCCA--CAC-AGGGATAGCCTT----------------GGCTTTTTTCTCTCC--AG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 860333 139 - 2385121 ACCTTACTGTTTGTGAGCCACCAAAACCACAGTGTTCTTTGCCTCAAGACC--CAGCTATCGTTCAGGTAACTGATGGT-AAATTT--G--TCTT--GGAGTACAGGTAAACTCCA--CAC-AGGGATAGCCTT----------------GGCTTTTTTCTCTCC--AG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2296163 139 + 4274983 ACCTTACTGTTTGTGAGCCACCAAAACCACAGTGTTCTTTGCCTCAAGACC--CAGCTATCGTTCAGGTAACTGATGGT-AAATTT--G--TCTT--GGAGTACAGGTAAACTCCA--CAC-AGGGTTAGCCTT----------------GGCTTTTTTCTCTCC--AG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530584 140 + 49145316 ACCTCACTGTTTGTGAGCCACCAAAACCACAGTGTTCTTTGCCTCAAGACC--CAGCTATCGTTCAGGTAACTGACAGT-AAATTT--T--TCTT--GGAGTACAGGTAAACTTCA--CAC-AGGGTTAGCCTT----------------GACTTTTTTCTCTCC-TGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375127 140 + 8899380 ACCTCACTGTTTGTGAGCCACCAAAACCACAGTGTTCTTTGCCTCAAGACC--CAGCTATCGTTCAGGTAACTGATTGT-AAATTT--T--TCTT--GGAGTGCAGATAAACTTCG--CAC-AGGGTTAGCCTT----------------GACTTTTTTTTCTCC-CAG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 336410 140 - 4471408 ACCTCACTGTTTGTGAGCCACCAAAACCACAGTGTTCTTTGCCTCAAGACC--CAGCTATCGTTCAGGTAACTGATAGT-AAATTT--T--TCTT--GGAGTACAGGTAAACTTCA--CAC-AGGGTTAGTCTT----------------GACTTTTTTCTCTCC-CAG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3938147 140 - 30143674 ACCTCACTGTTTGTGAGCCACCAAAACCACAATGTTCTTTGCCTCAAGATC--CAGCTATCGTTCAGGTAACTTACAGT-AAATTT--G--TCTT--GGAGTGCAAGTAGACCTCA--CAC-ATAGTTAGCTTT----------------GGCTTTTGCCTCTCC-CAA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 532062 136 + 2501019 ACCTCACTGTTTGTGAGCCACCGAAACCGCAGTGTTCTTTGCCTCAAGATC--CAGCTATCGTTCAGGTAACTTACAGT-AAATTT--G--TCTT--GGAGTGCACGTAAACTTCA--CAC-A----CAGCCTT----------------GGCTTTTGCCTCTCC-CAA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5448493 141 + 5549422 ACCTCACTGTTTGTGAGCCACCAAAACCACAGTGTTCTTTGCCTCAAGACC--CTGCTATTGTTCAGGTAACTGATAGTAAAATTT--G--TCTT--GGAGTGCAGCTAAACTTAG--CAC-ATGGTTGTCCTT----------------GGCTTTTGTCTCTCC-TAG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111066166 131 - 145441459 ACCTCACTGTTTGTGAGCCACCCAAACCACAATGTTCTTTGCCTCAGGACC--CGGCTATTGTTCAGGTAACTGA-AGC-AAATTG--C--CTTTCAGAGGCACAGTTA---------CAC-CTCGTTAGGCTT----------------GGCTTTTGCCTTTCC---- i mm10.chr7 C 0 C 0 s canFam3.chr1 4588692 158 - 122678785 ACCTCACTGTTTGTGAGCCACCAAAACCACAATGTTCTTTGCCTCAGGACC--CAGCTATTGTTCAGGTAACTGATAGT-AAATT---G--TCTT--GGAGTGCAAGAAAACTTCAAGTAC-ATGTCTATTCTTGGGTTTTTGGTTTTGGGGTTTTTTTCCCCCCTCAA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 285113 132 + 643850 ACCTCACTGTTTGTGAACCACCAAAACCACAATGTTCTTTGCCTCAGGACC--CAGCTATTGTTCAGGTAACTGATAGT-TAACTTCAG--TCTT--GTGCTTCATG-----------CTC-CTGACTGACCTT----------------GCTTTGCTTTTCCCA--GG i dasNov3.JH563638 C 0 I 475 e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M a score=395926.000000 s hg38.chr19_GL383574v1_alt 42456 27 + 155864 TTGAATGTTCATG-TAGCTTATCATTTC s panTro5.chr19 36111066 27 + 61309027 TTGAATGTTCATG-TAGCTTATCATTTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857122 27 + 64411610 TTGAATGTTCATG-TAGCTTATCATTTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274845 27 - 8369475 TTGAATGTTCATG-TAGCTTATCATTTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869611 27 - 106955855 TTGAATGTTCATG-TAGCTTATCATTTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30178229 27 + 53671032 TTGAATGTTCATG-TAGCTTATCATTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631155 27 + 59248254 TTGAATGTTCATG-TAGCTTATCATTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499090 27 - 13342542 TTGAATGTTCATG-TAGCTTATCATTTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5429658 28 + 7714307 TTGAATGTTCATGCTAGCTTATCATTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29236825 27 + 50890351 TTGAATGTTCATG-TAGCTTATCATTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 860472 27 - 2385121 TTGAATGTTCATG-TAGCTTATCATTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2296302 27 + 4274983 TTGAATGTTCATG-TAGCTTATCATTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530724 27 + 49145316 TTGAATGTTGATG-TAGCTTATCATTTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375267 27 + 8899380 TTGAATGTTGATG-TAGCTTATCATTTC i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 336550 27 - 4471408 TTGCATGTTGATA-TAGCTTATCATTTC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3938287 27 - 30143674 TTGGATGTTCATG-GAGCTTATCATTTC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 532198 27 + 2501019 TTGGATGTTCGTG-GAGCTTATCATTTC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5448634 27 + 5549422 TTGCATGTTCATG-GAGCATATCATTTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111066297 26 - 145441459 -TGAACCTTCATG-TAACATACTAATTA i mm10.chr7 C 0 C 0 s canFam3.chr1 4588850 26 - 122678785 TTGAGtgttcct--ttgcttatcacctc i canFam3.chr1 C 0 I 1081 s dasNov3.JH563638 285720 27 + 643850 TTAAATATTCACG-TCACTTACCATTTC i dasNov3.JH563638 I 475 C 0 e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M a score=1104543.000000 s hg38.chr19_GL383574v1_alt 42483 96 + 155864 CAAGTTACTGGGATAC---CTGAAA--TTAC-TGGATAATGTTCTCATCTAGGTTTTTCTCTTTGTATCATAAATTAGAACTA----AG------GTAAGAAACAGCTGAGG s panTro5.chr19 36111093 96 + 61309027 CAAGTTACTGGGATAC---CTGAAA--TTAC-TGGATAATGTTCTCATCTAGGTTTTTCTCTTTGTATCATAAATTAGAACTA----AG------GTAAGAAACAGCTGAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857149 96 + 64411610 CAAGTTACTGGGATAC---CTGAAA--TTAC-TGGATGATGTTCTCATCTAGGTTTTTCTCTTTGTATCATAAATTAGAACTA----AG------GTAAGAAACAGCTGAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274872 96 - 8369475 CAAGTTACTGGGATAC---CTGAAA--TTAC-TGGATAATGTTCTCATCTAGGTTTTTCTCTTTGTATCATAAATTAGAACTA----AG------ATAAGAAACAGCTGAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869638 96 - 106955855 CAAGTTACCTGGATAC---CTAAAA--TTAC-TGGATAATGTTCTCATATAGGTTTTTCTGTTTGTATCATAAATTAGAACTA----AG------GTAAGAAACAGCTGAGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30178256 93 + 53671032 CAAGTTACCTGGATAC---CTGAAA--TTAC-TGGATAATGTTCTCATCTAGGTTTTTCTCT---AATCATAAATTAGAACTA----AG------ATAAGAAACAGCTGAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631182 93 + 59248254 CAAGTTACCTGGATAC---CTGAAA--TTAC-TGGATAATGTTCTCATCTAGGTTTTTCTCT---AATCATAAATTAGAACTA----AG------ATAAGAAACAGCTGAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499117 93 - 13342542 CAAGTTACCTGGATAC---CTGAAA--TTAC-TGGATAATGTTCTCATCTAGGTTTTTCTCT---AATCATAAATTAGAACTA----AG------ATAAGAAACAGCTGAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5429686 92 + 7714307 CAGGTTA-TTGGATAC---CTGAAA--TTAC-TGGATAATGTTCTCATCTAGGTTTTTCTCT---AATCATATATTAGAACTA----AG------ATAGAAACAAGCTGAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29236852 93 + 50890351 CAAGTTACCTGGATAC---CTGAAA--TTAC-TGGATAATGTTCTCATCTAGGTTTTTCTCT---AATCATAAATTAGAACTA----AG------ATAAGAAACAGCTGAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 860499 93 - 2385121 CAGGTTACCTGGATAC---CTGAAA--TTAC-TGGATCATGTTCTCATCTAGGTTTTTCTCT---AATCATAAATTAGCACTA----AG------Ataagaagcagctgaag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2296329 93 + 4274983 CAAGTTACCTGGATAC---CTGAAA--TTAC-TGGATAATGTTCTCATCTAGGTTTTTCTCT---AATGATAAATTAGAACTA----AG------ATAAGAAACAGCTGAAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530751 96 + 49145316 CAAGTTACCTGGATAC---CTGAAA--TTAC-TGGATAATGATCTCATCTGGGTTTTTCTCTTTGTATCATAAATTAGGACTA----AG------GTAAAAAACAGCTGAGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375294 96 + 8899380 CAAGTTACCTGGATAC---CTGAAA--TTAC-TGGATAATGATCTCATCTAGGTTTTTCTCTTTGTATCATAAATTAGGACTA----AG------GTAAAAAACAGCTGAGG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 336577 96 - 4471408 CAAGTTACCTGGATAC---CTGAAA--TTAC-TGGATAATGATCTCATCTAGGTTTTTCTCTTTGTATCATAAATTAGGACCA----AG------GTAAAAAACAGCTGAGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3938314 93 - 30143674 TAAGTTACTTGAATAC---CAGAAA----------GTAATGTTCTCATCTAGGTTTTTCTCTTTGCATCATAATATAGGACTAAATTAG------GTAAGAAATAGCTGAGA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 532225 93 + 2501019 TAAGTTACTTGAATAC---CAGAAA----------GTAATGTTCTCATCTAGGTTTTTCTCTTTGAATTATAATATAGGACTAAACTAG------GTAAGAAATAGCTGAGA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5448661 105 + 5549422 TAAGTTGCTTGGATACTTACTGAAAATGACC-TGGATAATGTTCTCATCTAGGTTTTTTCCTTTGGATCATAAATTAGGACTAAATTAG------GTAAGAAATAGCTGGGG i otoGar3.GL873654 C 0 I 293 s mm10.chr7 111066323 90 - 145441459 GAAGTTACTTGAATAC---ATAAAA--TGACTTGAGTAATGTTCTTCTATAAGTTTCTTTGG--GGATCTTAAGTTGAAACTG---------------ATAAGTAACTGGAG i mm10.chr7 C 0 C 0 s dasNov3.JH563638 285747 92 + 643850 -----------AAAGT---TTAAAA--TAACCTAGATAATGTTCTCATGTAGGTTTTTCTGTTTGAGTCATAAGTTGGGACTA----AATAAGTTTTAAAAAATAGTTAAGG i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4588876 1081 - 122678785 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M a score=26983.000000 s hg38.chr19_GL383574v1_alt 42579 2 + 155864 AA s panTro5.chr19 36111189 2 + 61309027 AA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857245 2 + 64411610 AA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274968 2 - 8369475 AA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869734 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30178349 2 + 53671032 AA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631275 2 + 59248254 AA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499210 2 - 13342542 AA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5429778 2 + 7714307 AA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29236945 2 + 50890351 AA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 860592 2 - 2385121 aa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2296422 2 + 4274983 AA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530847 2 + 49145316 AA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375390 2 + 8899380 AA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 336673 2 - 4471408 AA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3938407 2 - 30143674 AG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 532318 2 + 2501019 AG i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111066413 2 - 145441459 aa i mm10.chr7 C 0 C 0 s dasNov3.JH563638 285839 2 + 643850 AA i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5448766 293 + 5549422 I e canFam3.chr1 4588876 1081 - 122678785 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M a score=72497.000000 s hg38.chr19_GL383574v1_alt 42581 6 + 155864 TTT------ATT--- s panTro5.chr19 36111191 6 + 61309027 TTT------ATT--- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857247 6 + 64411610 TTT------ATT--- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274970 6 - 8369475 TTT------ATT--- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869736 6 - 106955855 TTT------ATT--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30178351 6 + 53671032 TTT------GTT--- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631277 6 + 59248254 TTT------GTT--- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499212 6 - 13342542 TTT------GTT--- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5429780 6 + 7714307 TTT------GTT--- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29236947 6 + 50890351 TTT------GTT--- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 860594 6 - 2385121 ttt------gtt--- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2296424 6 + 4274983 TTT------GTT--- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530849 6 + 49145316 TTT------ATT--- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375392 6 + 8899380 TTT------ATT--- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 336675 6 - 4471408 TTT------ATT--- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3938409 6 - 30143674 ttt------att--- i micMur3.chr22 C 0 I 868 s proCoq1.NW_012149263v1 532320 6 + 2501019 TTT------ATT--- i proCoq1.NW_012149263v1 C 0 I 6 s otoGar3.GL873654 5449059 6 + 5549422 ttt------att--- i otoGar3.GL873654 I 293 C 0 s mm10.chr7 111066415 12 - 145441459 tttaaataaatt--- i mm10.chr7 C 0 C 0 s dasNov3.JH563638 285841 9 + 643850 TTT------ATTTCT i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4588876 1081 - 122678785 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M a score=296649.000000 s hg38.chr19_GL383574v1_alt 42587 24 + 155864 ATGAAAT--ATTTTCTAATTTCA--ACA s panTro5.chr19 36111197 24 + 61309027 ATGAAAT--ATTTTCTAATTTCA--ACA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857253 24 + 64411610 ATGAAAT--ATTTTCTAATTTCA--ACA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6274976 24 - 8369475 ATGAAAT--ATTTTCTAATTTCA--ACA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869742 24 - 106955855 ATGAAAT--ATTTTCTAATTTCA--ACA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30178357 24 + 53671032 ATGAAAT--ATTTTCTAATGTCA--ACA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631283 24 + 59248254 ATGAAAT--ATTTTCTAATGTCA--ACA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499218 24 - 13342542 ATGAAAT--ATTTTCTAATGTCA--ACA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5429786 26 + 7714307 ATGAAAT--ATTTTCTAATGTCAACACA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29236953 24 + 50890351 ATGAAAT--ATTTTCTAATGTCA--ACA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 860600 24 - 2385121 atgaaat--attttctaatgtca--aca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2296430 24 + 4274983 ATAAAAT--ATTTTCTAATGTCA--ACA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530855 24 + 49145316 ATAAAAT--ATTTTCTAATTTCA--ACA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375398 24 + 8899380 ATAAAAT--ATTTTCTAATTTCA--ACA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 336681 24 - 4471408 ATAAAAT--ATTTTCTAATTTCA--ACA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 532332 24 + 2501019 ATAAAAT--ATTTTCTAATTTTA--ACA i proCoq1.NW_012149263v1 I 6 I 25398 s otoGar3.GL873654 5449065 26 + 5549422 acaaaataaattttCTAATTTCA--ACA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111066427 24 - 145441459 ttataat--attttCTAGTTTCA--ACA i mm10.chr7 C 0 I 7 s dasNov3.JH563638 285850 24 + 643850 GTTTATA--ATGTTCTAATTTCA--TCA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3938415 868 - 30143674 I e canFam3.chr1 4588876 1081 - 122678785 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M a score=357919.000000 s hg38.chr19_GL383574v1_alt 42611 39 + 155864 ACAATTACCATAGCTAAC----ATTGAAGGCTACT-----------------CTGT-AGAA- s panTro5.chr19 36111221 39 + 61309027 ACAATTACCATAGCTAAC----ATTGAAGGCTACT-----------------CTGT-AGAA- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857277 39 + 64411610 ACAATTACCATAGCTAAC----ATTGAAGGCTACT-----------------CTGT-AGAA- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275000 39 - 8369475 ACAATTACCATAGCTAAC----ATTGAAGGCTACT-----------------CTGT-AGAA- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869766 39 - 106955855 ACAATTACCATAGCTAAC----ATTGAAGGCTACT-----------------CTGT-AGAA- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30178381 39 + 53671032 ACAATTGCGGTAGCTAAC----CTTGAAGGCTACG-----------------CTGT-GGAA- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631307 39 + 59248254 ACAATTGCGGTAGCTAAC----CTTGAAGGCTACG-----------------CTGT-GGAA- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499242 39 - 13342542 ACAATTGCGGTAGCTAAC----CTTGAAGGCTACG-----------------CTGT-GGAA- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5429812 39 + 7714307 ACATTTGCGGTAGCTAAC----ATTGAAGGCTACG-----------------CTGT-GGAA- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29236977 39 + 50890351 ACAATTGCAGTAGCTAAC----CTTGAAGGCTACG-----------------CTGT-GGAA- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 860624 39 - 2385121 acaattgcggtagctaac----cttgaaggctacg-----------------ctGT-GGAA- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2296454 39 + 4274983 ACAATTGCAGTAGCTAAC----CTTGAAGGCTACG-----------------CTGT-GGAA- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530879 39 + 49145316 ACAATTACAATAGCTAAT----ATCGAAGGCTACT-----------------CTGT-AGAA- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375422 39 + 8899380 ACAATTACAATAACTAAC----ATTGAAGGCTACT-----------------CTGT-AGAA- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 336705 39 - 4471408 ACAATTACAATAGCTAAC----ATTGAAGGCTACT-----------------CTGT-AGAA- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5449091 40 + 5549422 ACAGTTACAATAGCTAAC----ATTCAGGGCTACT-----------------CTATAAGAA- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111066458 42 - 145441459 ATTGTTACAATGGCTAGCATTTATTGAAAGTTA-A-----------------CTGT-GTAA- i mm10.chr7 I 7 I 1288 s dasNov3.JH563638 285874 57 + 643850 ATAGCtaaaacagctggc----atttatagagactgagctttgtgtcagggactgt-tcaaa i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 532356 25398 + 2501019 I e micMur3.chr22 3938415 868 - 30143674 I e canFam3.chr1 4588876 1081 - 122678785 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M a score=82572.000000 s hg38.chr19_GL383574v1_alt 42650 10 + 155864 GTGCTGTGCA s panTro5.chr19 36111260 10 + 61309027 GTGCTGTGCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857316 10 + 64411610 GTGCTGTGCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275039 10 - 8369475 GTGCTGTGCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869805 10 - 106955855 GTGCTGTGCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30178420 10 + 53671032 GTGGTGTACA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631346 10 + 59248254 GTGGTGTACA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499281 10 - 13342542 GTGGTGAACA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5429851 10 + 7714307 GTGGTGTACA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29237016 10 + 50890351 GTGGTGTACA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 860663 10 - 2385121 GTGGTGTACA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2296493 10 + 4274983 GTGGTGTACA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530918 10 + 49145316 GCACTGTGCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375461 10 + 8899380 GCACTGTACA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 336744 10 - 4471408 GCACTGTGCA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5449131 10 + 5549422 GCACTATTCA i otoGar3.GL873654 C 0 I 311 s dasNov3.JH563638 285931 10 + 643850 gcactgtaca i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 532356 25398 + 2501019 I e micMur3.chr22 3938415 868 - 30143674 I e mm10.chr7 111066500 1288 - 145441459 I e canFam3.chr1 4588876 1081 - 122678785 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M a score=57917.000000 s hg38.chr19_GL383574v1_alt 42660 6 + 155864 TATAAG s panTro5.chr19 36111270 6 + 61309027 TATAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857326 6 + 64411610 TATAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275049 6 - 8369475 TATAAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869815 6 - 106955855 TATAAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30178430 6 + 53671032 TATAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631356 6 + 59248254 TATAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499291 6 - 13342542 TATAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5429861 6 + 7714307 Tataag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29237026 6 + 50890351 TATAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 860673 6 - 2385121 TATAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2296503 6 + 4274983 TATAAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530928 6 + 49145316 TATAAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375471 6 + 8899380 TATAAT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 336754 6 - 4471408 TATAAG i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 285941 4 + 643850 --taaa i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 532356 25398 + 2501019 I e micMur3.chr22 3938415 868 - 30143674 I e otoGar3.GL873654 5449141 311 + 5549422 I e mm10.chr7 111066500 1288 - 145441459 I e canFam3.chr1 4588876 1081 - 122678785 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M a score=510337.000000 s hg38.chr19_GL383574v1_alt 42666 53 + 155864 ATaccctctgaggttggtactataattattctcacttttaacaagtgaggaag s panTro5.chr19 36111276 53 + 61309027 ACaccctctgaggttggtactataattattctcacttttaacaagtgaggaag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857332 53 + 64411610 ACaccctctgaggttggtactataattattctcacttttaacaagtgaggaag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275055 53 - 8369475 ACaccctctgaggttggtactataattattctcacttttaacaagtgaggaag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869821 53 - 106955855 ACACCCTCTGAGGTTGGCACCATAATTACTCTCACTTTTAACAagtgaggaag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30178436 53 + 53671032 ACACCCTCTGAGGTTGGTGCCATAATTATTCTCACTTTTAACAAGTGAAGAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631362 53 + 59248254 ACaccctctgaggttggtgccataattattctcacttttaacaagtgaagaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499297 53 - 13342542 ACACCCTCTGAGGTTGGTGCCATAATTATTCTCACTTTTAACAAGTAAGGAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5429867 52 + 7714307 ac-ccctctgaggttggtaccataattattctcacttttaacaagtgaggaaT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29237032 53 + 50890351 ACaccctctgaggttggtaccataattattctcacttttaacaagtgaggaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 860679 53 - 2385121 ACaccctctgaggttgttaccataattcttctcacttttaacaagtgaggaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2296509 53 + 4274983 ACaccctctgaggttggtaacataattattctcacttttaacaagtgaggaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530934 53 + 49145316 GCaccctctgaggttggtaccataattattctcacttttaacaagtgaggaaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375477 53 + 8899380 GCatcctctgaggttggtaccataattattctcacatttaacaagtgaggaaa i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 336760 53 - 4471408 ACaccctctgaagttggtaccataattattctcacttttaacaagtgaggaaa i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5449452 49 + 5549422 atattctttgaacatggtatcataat---tctcactttt-gtaagtgaggaaa i otoGar3.GL873654 I 311 C 0 s dasNov3.JH563638 285945 35 + 643850 -----ttcccagg------------taattctcaTTTTT-GCAAGTGAGGCAG i dasNov3.JH563638 C 0 I 721 e proCoq1.NW_012149263v1 532356 25398 + 2501019 I e micMur3.chr22 3938415 868 - 30143674 I e mm10.chr7 111066500 1288 - 145441459 I e canFam3.chr1 4588876 1081 - 122678785 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M a score=485177.000000 s hg38.chr19_GL383574v1_alt 42719 53 + 155864 ttcagatggagccac-aatttga--acagatccaggcagcct-gctt-cagaatctag s panTro5.chr19 36111329 53 + 61309027 ttcagatggagccac-aatttga--acagatccaggcagcct-gctt-cagaatctag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857385 53 + 64411610 ttcagatggagccac-aatttga--acagatccaggcagcct-gctt-cagaatctag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275108 53 - 8369475 ttcagatggagccac-aatttga--acagatccaggcagcct-gctt-cagaatctag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869874 53 - 106955855 ttcaggtggagccac-aatttga--acagatccaggcagcct-gctt-cagaatctag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30178489 53 + 53671032 TTCAggtagagtcac-tatttga--acagatccaggcagcct-gctt-tagaatctag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631415 53 + 59248254 ttcaggtagagTCAC-TATTTGA--ACAGATCCAGGCAGCCT-GCTT-TAGAATCTAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499350 53 - 13342542 TTCAGGTAGAGTCAC-TATTTGA--ACAGATCCAGGCAGCCT-GCTT-TAGAATCTAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5429919 57 + 7714307 TTCAGTTAGAGCCACATATTTGAACACAGCTCCAGGCAACCT-GCTTCTAGAATCTAG i cerAty1.NW_012005268v1 C 0 I 530 s chlSab2.chr6 29237085 53 + 50890351 ttcaggtagagccac-tatttga--acagatccaggcagcct-gctt-tagaatctag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 860732 53 - 2385121 ttcaggtagagTCAC-TATTTGA--ACAGATCCAAGCAGCCT-GCTT-TAGAATCTAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2296562 53 + 4274983 ttcaggtagagCCAC-TGTTTGA--ACAGATCCAGGCAGCCT-GCTT-TAGAATCTAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28530987 53 + 49145316 ttgagatggagccac-aatttgt--acagatccaggcagcct-gctt-cagaatctag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375530 53 + 8899380 ttgagatggagccac-aatttga--acagatccaggcagcct-gctt-cagaatctag i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 336813 53 - 4471408 ttgacatggagCCAC-AGTTTGA--ACAGATCCAGGCAGCCT-GCTT-CAGAATCTAG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5449501 54 + 5549422 ttgagATGGAGCCAC-AATGTGA--ACAGAGCCAGACATTCTGGCTC-CAGAATTGAG i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 532356 25398 + 2501019 I e micMur3.chr22 3938415 868 - 30143674 I e dasNov3.JH563638 285980 721 + 643850 I e mm10.chr7 111066500 1288 - 145441459 I e canFam3.chr1 4588876 1081 - 122678785 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M a score=1032507.000000 s hg38.chr19_GL383574v1_alt 42772 135 + 155864 gatccgtgctaccatgctatTGAGATATGGTTTATATTGCAAACCAAGGCAATAACAGCTACTCTTAGGTAAGATTATTAGGCTTAATGGG-----GAAAAAAAAGCAAAATCACATTGTTCTGCATATGTTATAATATG s panTro5.chr19 36111382 136 + 61309027 gatccgtgctaccatgctatTGAGATATGGTTTATATTGCAAACCAAGGCAATAACAGCTACTCTTAGGTAAGATTATTAGGCTTAATGGG----AAAAAAAAAAGCAAAATCACATTGTTCTGCATATGTTATAATATG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857438 136 + 64411610 gatccgtgctaccatgctatTGAGATATGGTTTATATTGCAAACCAAGGCAATAACAGCTACTCTTAGGTAAGATTATTAGGCTTAATGGG----AAAAAAAAAAGCAAAATCACATTGTTCTGCATATGTTATAATATG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275161 136 - 8369475 gatccatgctaccatgctatTGAGATATGGTTTATATTGCAAACCAAGGCAATAACAGCTACTCTTAGGTAAGATTATTAGGCTTAATGGG----AAAAAAAAAAGCAAAATCACATTGTTCTGCATATGTTATAATATG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63869927 140 - 106955855 gatccgtgctaccatgctatTGAGATATGGTTTATATTGCAAACCTGGGCAATAACAGCTACTCTTAGGTAAGATAATTAGGCTTAATGGGAAAAAAAAAAAAAAGCAAAATCACATTGTTCTGCATATGTTATAATATG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30178542 135 + 53671032 aatccgtgctaccatgctatTGAGATAGGGTTTATATTGCAAACCAGGGCAATAACAGGTACTCTTAGGTAAGATTATTAGGCTTAATGGG-----GAACAAAAAGCGAAATCACATTGTTCTGCTTATGTTACGATATG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631468 135 + 59248254 AATCCGTGCTACCATGCTATTGAGATAGGGTTTATATTGCAAACCAGGGCAATAACAGGTACTCTTAGGTAAGATTATTAGGCTTAATGGG-----GAACAAAAAGCGAAATCACATTGTTCTGCTTATGTTACGATATG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499403 135 - 13342542 AATCCGTGCTACCATGCTATTGAGATAGGGTTTATATTGCAAACCAGGGCAATAACAGGTACTCTTAGGTAAGATTATTAGGCTTAATGGG-----GAACAAAAAGCGAAATCACATTGTTCTGCTTATGTTACGATATG i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29237138 135 + 50890351 aatccgtgctaccatgctatTGAGATATGGTTTATATTGCAAACCAGGGCAATAACAGCTACTCTTAGATAAGATTATTAGGCTTAATGGG-----GAACAAAAAGCAAAATCACATTGTTCTGCATATGTTACGATATG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 860785 135 - 2385121 AATCCGTGCTACCATGCTATTGAGATATGGTTTATATTGCAAACCAGGGCAATAACAGCTACTCTTAAATAAGATTATTAGGCTTAATGGG-----GAACAAAAAGCAAAATCACATTGTTCTGCATATGTTACGATATG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2296615 135 + 4274983 AATCCGTGCTACCATGCTATTGAGATATGGTTTATATTGCAAACCAGGGCAATAACAGCTACTCTTAGATAAGATTATTAGGTTTAATGGG-----GAACAAAAAGCAAAATCACATTGTTCTGCATTTGTTATAATATG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28531040 130 + 49145316 gatctgtgctaccatactatCAAGATATGGTTTATATTGCAAACCAGGGCAATAACAG---TTCTTAGACAAGATTATTAGGTTTAATGGG-------GAAAAAAGCAAAATCACATTGTTCTGCTTATTATATAATATG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375583 129 + 8899380 gatctgtgctaccgtattatTGAGATATGG-TTATATCGCAAACCAGGGCACTAACAG---TTCTTAGACAAGATTATTAGGTTTAATGGG-------AAAAGAAGCAAAATCACATTGTTTTGCATATTATATAATATG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 336866 131 - 4471408 GATCTGTGCTACCATACTATTGAGATATGGTTTATATTGCAAACCAGGGCAATAACAG---TTCTTAGACAAGATTATTAGGTTTAATGGG------AAAAAAAAGCAAAATCACATTGTTCTGCATATTATATAATATG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5449555 131 + 5549422 GGTCCATGCTGCTGTGCTTTTCAGATACAGTTCATATTGCAAACCAGAATAATAATGGCGGCTCTTAAGATAGATTACTAGGCTTACAGGA------GGGAAAAGGCTAAATCACATTA---CACATATGTTATATAATG i otoGar3.GL873654 C 0 I 1134 e proCoq1.NW_012149263v1 532356 25398 + 2501019 I e micMur3.chr22 3938415 868 - 30143674 I e dasNov3.JH563638 285980 721 + 643850 I e mm10.chr7 111066500 1288 - 145441459 I e canFam3.chr1 4588876 1081 - 122678785 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M e cerAty1.NW_012005268v1 5429976 530 + 7714307 I a score=61877.000000 s hg38.chr19_GL383574v1_alt 42907 9 + 155864 CAGTGTTGG s panTro5.chr19 36111518 9 + 61309027 CAGTGTTGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857574 9 + 64411610 CAGTGTTGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275297 9 - 8369475 CAGTGTTGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870067 9 - 106955855 CAGTGTTGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30178677 9 + 53671032 CAATGTTGG i rheMac8.chr19 C 0 I 13 s macFas5.chr19 34631603 9 + 59248254 CAATGTTGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499538 9 - 13342542 CAGTGTTGG i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29237273 9 + 50890351 CAATGTTGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 860920 9 - 2385121 CAATGTTGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2296750 9 + 4274983 AAATGTTGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28531170 9 + 49145316 CAATGTTCG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375712 9 + 8899380 CAATGTTCG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 336997 9 - 4471408 CAATGTTCG i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 532356 25398 + 2501019 I e micMur3.chr22 3938415 868 - 30143674 I e dasNov3.JH563638 285980 721 + 643850 I e otoGar3.GL873654 5449686 1134 + 5549422 I e mm10.chr7 111066500 1288 - 145441459 I e canFam3.chr1 4588876 1081 - 122678785 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M e cerAty1.NW_012005268v1 5429976 530 + 7714307 I a score=-18829.000000 s hg38.chr19_GL383574v1_alt 42916 12 + 155864 TTTTTGttttgt s panTro5.chr19 36111527 7 + 61309027 tttttgt----- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857583 7 + 64411610 tttttgt----- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275306 7 - 8369475 Tttttgt----- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870076 10 - 106955855 TTTTttt--ttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34631612 2 + 59248254 ----------GG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499547 2 - 13342542 ----------GG i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29237282 1 + 50890351 -----------G i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 860929 1 - 2385121 -----------G i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2296759 1 + 4274983 -----------G i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28531179 11 + 49145316 TCtttgttttg- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375721 12 + 8899380 TCTTTGttttgt i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 337006 12 - 4471408 TCTTTGttttgt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 532356 25398 + 2501019 I e micMur3.chr22 3938415 868 - 30143674 I e dasNov3.JH563638 285980 721 + 643850 I e otoGar3.GL873654 5449686 1134 + 5549422 I e mm10.chr7 111066500 1288 - 145441459 I e canFam3.chr1 4588876 1081 - 122678785 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M e cerAty1.NW_012005268v1 5429976 530 + 7714307 I e rheMac8.chr19 30178686 13 + 53671032 I a score=14897.000000 s hg38.chr19_GL383574v1_alt 42928 12 + 155864 ttttctttttct- s panTro5.chr19 36111534 7 + 61309027 -----tttttct- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857590 5 + 64411610 -------tttct- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275313 12 - 8369475 tttgttttcttt- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870086 12 - 106955855 cttttttctttt- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34631614 12 + 59248254 GGttttttttct- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499549 12 - 13342542 GGGtttttttct- i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29237283 12 + 50890351 GGGttttttttc- i chlSab2.chr6 C 0 I 1 s manLeu1.NW_012102454v1 860930 12 - 2385121 Gtttttttttct- i manLeu1.NW_012102454v1 C 0 I 1 s colAng1.NW_012111697v1 2296760 12 + 4274983 Gttttttttttt- i colAng1.NW_012111697v1 C 0 I 2 s calJac3.chr22 28531190 6 + 49145316 -----tttctc-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375733 11 + 8899380 ttttctttttc-- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 337018 11 - 4471408 ttttctttttc-- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5450820 12 + 5549422 -TTATCTCCtctt i otoGar3.GL873654 I 1134 C 0 e proCoq1.NW_012149263v1 532356 25398 + 2501019 I e micMur3.chr22 3938415 868 - 30143674 I e dasNov3.JH563638 285980 721 + 643850 I e mm10.chr7 111066500 1288 - 145441459 I e canFam3.chr1 4588876 1081 - 122678785 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M e cerAty1.NW_012005268v1 5429976 530 + 7714307 I e rheMac8.chr19 30178686 13 + 53671032 I a score=2463762.000000 s hg38.chr19_GL383574v1_alt 42940 311 + 155864 tttt-ttttttttttgacag--agtc---------------gttggagtacagtggcgtgaactcggctcactacaacctccgcctcccaggttcaagtgattcttctgcctcagcctcctgagtagctgggattacaggcatgcaccaccacacccggctaattcttgtatttttagtagagatgaggtttcaccatgttggcc--agcctggtctcaaactactgacctcaggtgatccgcccacctcagcctcccaaagtgctgggattacaggcatg-agccactgtgcctggccTGCAATGTTATATAATAAGAAAACACAAACATC s panTro5.chr19 36111541 311 + 61309027 tttt-ttttttttttgacag--agtc---------------gttggagtacagtggcgcgaactcggctcactgcaacctccacctcccggattcaagcgattcttctgcctcagcctcctgagtagctgggattacaggcacgcaccaccacacccggctaattcttgtatttttagtagagatggggtttcaccatgttggcc--agcctggtctcaaactactgacctcaggtgatccgcccacctcagcctcccaaagtgctgggattataggcatg-agccactgtgcctggccTGCAATGTTATATAATAAGAAAACACAAACATC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857595 309 + 64411610 tttt-tttttttgt--acag--agtc---------------gttggagtacagtggcgcgaactcggctcactgcaacctccacctcccgggttcaagcgattcttctgcctcagcctcctgagtagctgggattacaggcacgcaccaccacacccggctaattcttgtatttttagtagagatggggtttcaccatgttggcc--agcctggtctcaaactactgacctcaggtgatccgcccacctcagcctcccaaagtgctgggattacaggcatg-agccactgtgcctggccTGCAATGTTATATAATAAGAAAACACAAACATC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275325 311 - 8369475 tttt-ttttttttttgacag--agtc---------------gttggagtacagtggcgcgaactcggctcactgcaacctccgcctcccgggttcaagcgattcttctgcctcagcctcctgagtagctgggattacaggcacgcaccaccacgcccggctaattcttgtatttttagtagagatggggtttcaccatgttggcc--agcctggtctcaaactactgacctcaggtgatccgcccacctcagcctcccaaagtgctgggattacaggcatg-agccactgtgcctggccTGCAATGTTATATAATAAGAAAACACAAACATC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870098 311 - 106955855 tttt-ttttctttttgacag--agtc---------------gttggagtacagtggcgcgaactcggttcactgcaacctccgtctcccgggttcaagtgattcttctgcctcagcctcctgagtagctgggattacaggcacgcaccaccatgctcggctaattcttgtatttttagtagagatggggtttcaccatgttggcc--agcctggtctcaaactactgacctcagatgatccacccacctcagcctcccaaagtgctgggattacaggcatg-agccaccgcgcctggccTGCAATGTTATATAATAAGAAAACACAAACATA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30178699 311 + 53671032 ttcc-ttttttttttgaaac--agtc---------------attggagtacagtggcgcgaactcggcttactgcaacctccgcctccctggttcaagcgattcttctgcctcagcctcctgagtagctgggactataggcacacaccaccacgcccggctaattcttgtatttttagtagagatgaggttttaccatgttggcc--agcctggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggattacaggcatg-agccactgtgcctggccCACAATGTTATATAATAAGAAAACACAAACATA i rheMac8.chr19 I 13 C 0 s macFas5.chr19 34631626 310 + 59248254 -tcc-ttttttttttgaaac--agtc---------------attggagtacagtggcgcgaactcggcttactgcaacctccgcctccctggttcaagcgattcttctgcctcagcctcctgagtagctgggactacaggcacacaccaccacgcccggctaattcttgtatttttagtagagatgaggtttcaccatgttggcc--agcctggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggattacaggcatg-agccactgtgcctggccCACAATGTTATATAATAAGAAAACACAAACATA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499561 311 - 13342542 -tcctttttttttttgaaac--agtc---------------attggagtacagtggcgcgaactcggcttactgcaacctccgcctccctggttcaagcgattcttctgcctcagcctcctgagtagctgggactacaggcacacaccaccacgcccggctaattcttgtatttttagtagagatgaggtttcaccatgttggcc--agcctggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggattacaggcatg-agccactgtgcctggccCACAATGTTATATAATAAGAAAACACAAACATA i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29237296 311 + 50890351 ttct-ttttttttttgaaac--agtc---------------gttggagtacagtggcacgaactcggcttactgcaacctccacctccctggttcaagcgattcttctgcctcagcctcctgagtagctgggactacaggcacgcaccaccacgcccagctaattcttgtatttttagtagagatgaggtttcaccatgttggcc--agcctggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggattacaggcatg-agccactgtgcctggccCGCAATGTTATATAATAAGAAAACACAAACATA i chlSab2.chr6 I 1 C 0 s manLeu1.NW_012102454v1 860943 311 - 2385121 cctt-ttttttttttgaaac--agtc---------------gttggagtatagtggcgcgaactcggcttactgcaacctccgcctgcctggttcaagcaattcttctgcctcagcctcctgagtagctgggactacaggcacgcaccaccacgcccggctaattcttgtatttttagtagagatgaggtttcaccatgttggcc--agcctggtctcaaactcctgacctcaggtgatccgccgacctcagcctcccaaagtgctgggattacaggcatg-agccactgtgcctggccTGCAATGTTATATAATAAGAAAGCACAAACATA i manLeu1.NW_012102454v1 I 1 C 0 s colAng1.NW_012111697v1 2296774 313 + 4274983 ttcc-ttttttttttgaaacagagtc---------------attggagtacagtggcgcgaactcggctcactgcaacctccgcctccctggttcaagcgattcttctgcctcagcctcctgagtagctgggactacaggcatgcaccaccacacctggctaattcttgtatttttagtagagatgaggtttcaccatgttggcc--agcctggtctcaaactcctgacctcaggtgatccgcccacctcagcctctcaaagtgctgggattataggcatg-agccactgtgcctggccTGCAATGTTATATGATAAGAAAACACAAACATA i colAng1.NW_012111697v1 I 2 C 0 s calJac3.chr22 28531196 312 + 49145316 --tt-ttttctttttgaaatagagtc---------------attggagtacagtggcatgaactcgactcactgcaatctccacctcccgggttcaagcaattcttctgcctcagcctcctgagtagctgggattacaggcatgcaccacagcacccagctaattcttgtgtttttagtagagatggggtttcaccatgttggcc--agcctggtctcaaactcctgacctcaagtgatccgcccacctcagcctcccaaagtgctgggattacaggcatgaagccactgtgcctggccTGCAGTGTTATATAATAAGAAAACATAAACATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5375744 311 + 8899380 --tt-ttttctttttgaaatagagtc---------------attggaatacagtggcatgaacttggctcactgcaatcttcacctcccaggttcaaacaattcttctgcctcagcctcctgagtagctgggattacaggcatgcaccacaacacccagctaattcttgtatttttagtagaggcggggtttcaccatgttggcc--agcctgttctcaaactcctgacctcaagtgatccgcccacctcagcctcccaaagtgctgggattacaggcatg-agccactgtgcctggccTGCAATGTTATATAGTAAGAAAACATAAACGTA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 337029 311 - 4471408 --tt-ttttctttttgaaatagagtc---------------attggagtacagtggcatgatctcagctcactgcaatctccacctcccgggttcaagcaattcttctacctcagcctcctgagtagctgggattacaggcatgcaccacaacacccagctaattcttgtatttttagtagagatgggatttcaccatgttggcc--aggctggtctcaaactcctgacctcaagtgatccacccacttcagcctcccaaagtgctgggattacaggcatg-agccactgtgtctggccTGCAGTGTTATATAATAAGAAAACGTAAACATA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5450832 250 + 5549422 tttt-tttttttttaaacag--agtctcactttgtcaccctagtagggtgccatggtgt---cacagctcacagcaacctacaactccttggcttaggcaattctcttgcctcagcctcccaggtagccaggactataggcgcccaccacaacgcccagctgttttttttgttgttg------------------caaattggctgaggccaggttcaaacccactgctctcgg-------------------------------------tatatg---g-ggcca--gcaccctacccactgagt---------------cacagacgcc i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 532356 25398 + 2501019 I e micMur3.chr22 3938415 868 - 30143674 I e dasNov3.JH563638 285980 721 + 643850 I e mm10.chr7 111066500 1288 - 145441459 I e canFam3.chr1 4588876 1081 - 122678785 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M e cerAty1.NW_012005268v1 5429976 530 + 7714307 I a score=57770.000000 s hg38.chr19_GL383574v1_alt 43251 7 + 155864 AATGTAT s panTro5.chr19 36111852 7 + 61309027 AATGTAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857904 7 + 64411610 AATGTAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275636 7 - 8369475 AATGTAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870409 7 - 106955855 AATGTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179010 7 + 53671032 AATGCAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631936 7 + 59248254 AATGCAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499872 7 - 13342542 AATGCAT i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29237607 7 + 50890351 AATGTAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 861254 7 - 2385121 AATGTAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2297087 7 + 4274983 AATGTAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28531508 7 + 49145316 AATGTAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376055 7 + 8899380 AATGTAT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 337340 7 - 4471408 AATGTAT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5451082 7 + 5549422 gcccTAT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4589957 7 - 122678785 AAAGTAC i canFam3.chr1 I 1081 C 0 e proCoq1.NW_012149263v1 532356 25398 + 2501019 I e micMur3.chr22 3938415 868 - 30143674 I e dasNov3.JH563638 285980 721 + 643850 I e mm10.chr7 111066500 1288 - 145441459 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M e cerAty1.NW_012005268v1 5429976 530 + 7714307 I a score=206530.000000 s hg38.chr19_GL383574v1_alt 43258 26 + 155864 --TTTAACATATTTAGATCAGCTCTTAA s panTro5.chr19 36111859 26 + 61309027 --TTTAACATATTTAGATCAGCTCTTAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857911 26 + 64411610 --TTTAACATATTTAGATCAGCTCTTAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275643 26 - 8369475 --TTTAACATATTTAGATCAGCTCTTAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870416 26 - 106955855 --TTTAACGTATTTAGATCAGCTCTTAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179017 26 + 53671032 --TTTAACATATTTAGGTCAACTCTTAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631943 26 + 59248254 --TTTAACATATTTAGGTCAACTCTTAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499879 26 - 13342542 --TTTAACATATTTAGGTCAACTCTTAA i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29237614 26 + 50890351 --TTTAACATATTTAGGTCAACTCTTAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 861261 26 - 2385121 --TTTAACATATTTAGGTCAACTCTTAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2297094 26 + 4274983 --TTTAACATATTTAGGTCAACTCTTAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28531515 26 + 49145316 --TTTAATATATTTAGATCAGCTCTTAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376062 26 + 8899380 --TTTAACATATTTAGATCAGCTCTTAA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 337347 26 - 4471408 --TTTAACATATTTAGATCAGCTCTTAA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4589964 25 - 122678785 TTTTTAACA---TTTACTTAATATTTAT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 532356 25398 + 2501019 I e micMur3.chr22 3938415 868 - 30143674 I e dasNov3.JH563638 285980 721 + 643850 I e otoGar3.GL873654 5451089 0 + 5549422 C e mm10.chr7 111066500 1288 - 145441459 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M e cerAty1.NW_012005268v1 5429976 530 + 7714307 I a score=80766.000000 s hg38.chr19_GL383574v1_alt 43284 11 + 155864 ATCTCCCAATT- s panTro5.chr19 36111885 11 + 61309027 ATCTCCCAATT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857937 11 + 64411610 ATCTCCCAATT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275669 11 - 8369475 ATCTCCCAATT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870442 11 - 106955855 ATCTCCCAATG- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179043 11 + 53671032 ATCTCCCAATT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631969 11 + 59248254 ATCTCCCAATT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499905 11 - 13342542 ATCTCCCAATT- i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29237640 11 + 50890351 ATCTCCCAATT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 861287 11 - 2385121 ATCTTCCAATT- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2297120 11 + 4274983 ATCTCCCAATT- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28531541 11 + 49145316 ATTTTTCAATT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376088 11 + 8899380 ATTTCCCAATT- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 337373 11 - 4471408 ATTTCCCAATT- i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111067788 11 - 145441459 ATCtattaaaa- i mm10.chr7 I 1288 C 0 s canFam3.chr1 4589989 12 - 122678785 CTTTCCTGAATA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 532356 25398 + 2501019 I e micMur3.chr22 3938415 868 - 30143674 I e dasNov3.JH563638 285980 721 + 643850 I e otoGar3.GL873654 5451089 0 + 5549422 C e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M e cerAty1.NW_012005268v1 5429976 530 + 7714307 I a score=124373.000000 s hg38.chr19_GL383574v1_alt 43295 13 + 155864 TAAGCTTTTTAA-T s panTro5.chr19 36111896 13 + 61309027 TAAGCTTTTTAA-T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857948 13 + 64411610 TAAGCTTTTTAA-T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275680 13 - 8369475 TAAGCTTTTTAA-T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870453 13 - 106955855 TAAGCTTTTTAA-T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179054 12 + 53671032 TAAACTTTTTAA-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631980 12 + 59248254 TAAACTTTTTAA-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499916 13 - 13342542 TAAACTTTTTAAT- i macNem1.NW_012011689v1 C 0 I 1 s chlSab2.chr6 29237651 12 + 50890351 TAAACTTTTTAA-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 861298 12 - 2385121 TAAACTTTTTAA-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2297131 12 + 4274983 TAAACTTTTTAA-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28531552 13 + 49145316 TAACCTTTTTAA-T i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376099 13 + 8899380 TAAGTTTTTTAA-T i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 337384 13 - 4471408 TAAGCTTTTTAA-T i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3939283 13 - 30143674 TAAGCTTTTGAA-T i micMur3.chr22 I 868 C 0 s proCoq1.NW_012149263v1 557754 13 + 2501019 TAAGCTTTTGAA-T i proCoq1.NW_012149263v1 I 25398 C 0 s mm10.chr7 111067799 13 - 145441459 taaaatttttaa-t i mm10.chr7 C 0 C 0 s canFam3.chr1 4590001 13 - 122678785 TAAGTTTTTTAA-T i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 286701 13 + 643850 TAAGCTTTTCAA-T i dasNov3.JH563638 I 721 C 0 e otoGar3.GL873654 5451089 0 + 5549422 C e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M e cerAty1.NW_012005268v1 5429976 530 + 7714307 I a score=70753.000000 s hg38.chr19_GL383574v1_alt 43308 51 + 155864 AAGGA-------ATTGTAAATTTTG----TTGCAGCATAAGCT-----GGAGAAATTCTCTACTCTC s panTro5.chr19 36111909 54 + 61309027 AAGGA-------ATTGTAAATTTTGTT-CTTGCAGCATAAGCT-----GGAGAAATTCTCTACTTTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39857961 54 + 64411610 AAGGA-------ATTGTAAATTTTATT-CTTGCAGCATAAGCT-----GGAGAAATTCTCTGCTTTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275693 53 - 8369475 AAGGA-------ATTGTAAA-TTTGTT-CTTGCAGCATAAGCT-----GGAGAAATTCTCTACTCTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870466 54 - 106955855 AAGGA-------ATTGTAAATTTTGTT-CTTGCAGCATAAGCT-----GGAGAAATTCTCTACTCTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179066 2 + 53671032 -----------------------------------------------------------------TC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631992 2 + 59248254 -----------------------------------------------------------------TC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 29237663 2 + 50890351 -----------------------------------------------------------------TC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 861310 2 - 2385121 -----------------------------------------------------------------TC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2297143 2 + 4274983 -----------------------------------------------------------------TC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28531565 54 + 49145316 AAGGA-------ATTGCAAATTTTGTT-CTTACAGCATAAGCT-----AGAGAAATTCTCTACTCTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376112 54 + 8899380 GAGGA-------ATTGTAAATTTTGTT-CTTACAGCATAAGCT-----AGAGAAATTCTCTACTCTC i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 337397 54 - 4471408 AAGGA-------ATTGTAAATTTTGTT-CTTACAGCATAAGCT-----AGAGAAATTCTCTACTCTC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3939296 54 - 30143674 AAGAA-------ATTACAAGTTTTGTT-CTTGTAGCATAAACT-----GGAGAAATTCTCTACACTC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 557767 54 + 2501019 AAAAA-------ATTGTAAGTTTTGTT-CTTGCAGCATAAACT-----GGAGAAATTCTCTACTCTC i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111067812 67 - 145441459 aaaaataCCTTGATGATAAATTTTTCTGAATATAAAAGAATCTTTTTGGTAAAAAATTGGAACTTTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4590014 53 - 122678785 AAGAA-------ATAGTTAAATTTATT-CTTAAAACATAAACT-----GGAAAAATTCTCTTCTCT- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 286714 54 + 643850 AAGAA-------ATGATAAATTTTTTC-TTGCAAGCATAAACA-----GGAGAAATTTTCTACCTTC i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5451089 0 + 5549422 C e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M e cerAty1.NW_012005268v1 5429976 530 + 7714307 I e macNem1.NW_012011689v1 4499929 1 - 13342542 I a score=61835.000000 s hg38.chr19_GL383574v1_alt 43359 6 + 155864 ATCTAC s panTro5.chr19 36111963 6 + 61309027 ATCTAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858015 6 + 64411610 ATCTAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275746 6 - 8369475 ATCTAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870520 6 - 106955855 ATCTGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179068 6 + 53671032 ATCTAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34631994 6 + 59248254 ATCTAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499930 6 - 13342542 ATCTAC i macNem1.NW_012011689v1 I 1 C 0 s chlSab2.chr6 29237665 6 + 50890351 ATCTAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 861312 6 - 2385121 ATCTAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2297145 6 + 4274983 ATCTAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28531619 6 + 49145316 ATCTAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376166 6 + 8899380 ATCTAT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 337451 6 - 4471408 ATCTAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3939350 6 - 30143674 AGCTAT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 557821 6 + 2501019 AGCTAT i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111067879 6 - 145441459 ATCCTT i mm10.chr7 C 0 C 0 s canFam3.chr1 4590067 2 - 122678785 ----AC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 286768 6 + 643850 ATCTAT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5451089 0 + 5549422 C e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M e cerAty1.NW_012005268v1 5429976 530 + 7714307 I a score=22635.000000 s hg38.chr19_GL383574v1_alt 43365 2 + 155864 -CC s panTro5.chr19 36111969 2 + 61309027 -CC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858021 2 + 64411610 -CC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275752 2 - 8369475 -CC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870526 2 - 106955855 -CC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179074 2 + 53671032 -TC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34632000 2 + 59248254 -CC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499936 2 - 13342542 -CC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5430506 2 + 7714307 -CC i cerAty1.NW_012005268v1 I 530 C 0 s chlSab2.chr6 29237671 2 + 50890351 -CC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 861318 2 - 2385121 -CC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2297151 2 + 4274983 -CC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28531625 2 + 49145316 -CC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376172 2 + 8899380 -CC i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 337457 2 - 4471408 -CC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3939356 2 - 30143674 -CC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 557827 2 + 2501019 -CC i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111067885 2 - 145441459 -TC i mm10.chr7 C 0 I 7 s canFam3.chr1 4590069 2 - 122678785 -CC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 286774 2 + 643850 GC- i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5451089 0 + 5549422 C e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M a score=29735.000000 s hg38.chr19_GL383574v1_alt 43367 2 + 155864 CT s panTro5.chr19 36111971 2 + 61309027 CT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858023 2 + 64411610 CT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275754 2 - 8369475 CT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870528 2 - 106955855 CT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179076 2 + 53671032 CT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34632002 2 + 59248254 CT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499938 2 - 13342542 CT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5430508 2 + 7714307 CT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29237673 2 + 50890351 CT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 861320 2 - 2385121 CT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2297153 2 + 4274983 CT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28531627 2 + 49145316 CT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376174 2 + 8899380 CT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 337459 2 - 4471408 CT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3939358 2 - 30143674 CT i micMur3.chr22 C 0 I 51 s proCoq1.NW_012149263v1 557829 2 + 2501019 CT i proCoq1.NW_012149263v1 C 0 I 48 s otoGar3.GL873654 5451089 2 + 5549422 CT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4590071 2 - 122678785 CA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 286776 2 + 643850 TT i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111067887 7 - 145441459 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M a score=336077.000000 s hg38.chr19_GL383574v1_alt 43369 30 + 155864 -ACCCTTGT----TAAGTCTTATTTTGGTGAAAGG s panTro5.chr19 36111973 29 + 61309027 -ACCCTTGT----TAAGTCTTATTTTGG-GAAAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858025 30 + 64411610 -ACCCTTGT----TAAGTCTTATTTTGGTGAAAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275756 30 - 8369475 -ACCCTTGT----TAAGTCTTATTTTGGTGAAAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870530 28 - 106955855 -ACCCTTGT----TAAGTCTTA--TTGGTGAAAGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179078 30 + 53671032 -ACCCTTGT----TAAGTCTTATTTTGGTGAAAGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34632004 30 + 59248254 -ACCCTTGT----TAAGTCTTATTTTGGTGAAAGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4499940 30 - 13342542 -ACCCTTGT----TAAGTCTTATTTTGGTGAAAGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5430510 29 + 7714307 -ACCCTTGT----TAAGTCTTA-TTTGGTGAAAGG i cerAty1.NW_012005268v1 C 0 I 347 s chlSab2.chr6 29237675 30 + 50890351 -ACCCTTGT----TAAGTCTTATTTTGGTGAAAGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 861322 30 - 2385121 -ACCCTTGT----TAAGTCTTATTTTGGTGAAAGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2297155 30 + 4274983 -ACCCTTGT----TAAGTCTTATTTTGGTGAAAGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28531629 30 + 49145316 -ACCCTTTT----TAAGTCTTCTTTTGGTGAAAGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376176 30 + 8899380 -ACCCTGGT----TAAGTCTTATTTTGGTGAAAGG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 337461 30 - 4471408 -ACCCTTGT----TAAGTCTTATTTTGGTGAAAGG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5451091 30 + 5549422 -CCTCTTTT----TAGGCCTTGTTTTTGGGGACAG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111067894 34 - 145441459 -ATCTTTGTCTTCTAATTTTTATCTTGGTGCAACA i mm10.chr7 I 7 C 0 s canFam3.chr1 4590073 30 - 122678785 -CTCCTTGT----TAAGTCTAATTTTTAAGAAAGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 286778 31 + 643850 TCCTCTTTT----TAAATCTTATTTTGGGGGGAGT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 557831 48 + 2501019 I e micMur3.chr22 3939360 51 - 30143674 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M a score=97692.000000 s hg38.chr19_GL383574v1_alt 43399 9 + 155864 AAGCCTGAA s panTro5.chr19 36112002 9 + 61309027 AAGCCTGAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858055 9 + 64411610 AAGCCTGAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275786 9 - 8369475 AAGCCTGAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870558 9 - 106955855 AAGCCTGAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179108 9 + 53671032 AAACCTGAA i rheMac8.chr19 C 0 I 334 s macFas5.chr19 34632034 9 + 59248254 AAACCTGAA i macFas5.chr19 C 0 I 332 s macNem1.NW_012011689v1 4499970 9 - 13342542 AAACCTGAA i macNem1.NW_012011689v1 C 0 I 334 s chlSab2.chr6 29237705 9 + 50890351 AAACCTGAA i chlSab2.chr6 C 0 I 333 s manLeu1.NW_012102454v1 861352 9 - 2385121 AAACCTGAA i manLeu1.NW_012102454v1 C 0 I 333 s colAng1.NW_012111697v1 2297185 9 + 4274983 AAACCTGAA i colAng1.NW_012111697v1 C 0 I 804 s calJac3.chr22 28531659 9 + 49145316 AAGCCTGAA i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5376206 9 + 8899380 AAGCCTGAA i saiBol1.JH378197 C 0 I 1 s aotNan1.NW_018505377v1 337491 9 - 4471408 AAGCCTGAA i aotNan1.NW_018505377v1 C 0 I 1 s otoGar3.GL873654 5451121 9 + 5549422 CTATCTGAA i otoGar3.GL873654 C 0 I 6 s mm10.chr7 111067928 9 - 145441459 GAATCTTAA i mm10.chr7 C 0 C 0 s canFam3.chr1 4590103 9 - 122678785 AAATCTGAA i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 286809 9 + 643850 AAGTCTGAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 557831 48 + 2501019 I e micMur3.chr22 3939360 51 - 30143674 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M e cerAty1.NW_012005268v1 5430539 347 + 7714307 I a score=-12209.000000 s hg38.chr19_GL383574v1_alt 43408 2 + 155864 --------GT s panTro5.chr19 36112011 2 + 61309027 --------GT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858064 2 + 64411610 --------GT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275795 2 - 8369475 --------GT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870567 2 - 106955855 --------GT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28531669 1 + 49145316 --------G- i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5376216 1 + 8899380 --------G- i saiBol1.JH378197 I 1 C 0 s aotNan1.NW_018505377v1 337501 1 - 4471408 --------G- i aotNan1.NW_018505377v1 I 1 C 0 s otoGar3.GL873654 5451136 2 + 5549422 --------GT i otoGar3.GL873654 I 6 I 1 s mm10.chr7 111067937 2 - 145441459 --------GT i mm10.chr7 C 0 C 0 s canFam3.chr1 4590113 1 - 122678785 --------G- i canFam3.chr1 I 1 I 8 s dasNov3.JH563638 286818 8 + 643850 GAAATCCT-- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 557831 48 + 2501019 I e micMur3.chr22 3939360 51 - 30143674 I e chlSab2.chr6 29237714 333 + 50890351 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M e colAng1.NW_012111697v1 2297194 804 + 4274983 I e manLeu1.NW_012102454v1 861361 333 - 2385121 I e cerAty1.NW_012005268v1 5430539 347 + 7714307 I e macNem1.NW_012011689v1 4499979 334 - 13342542 I e macFas5.chr19 34632043 332 + 59248254 I e rheMac8.chr19 30179117 334 + 53671032 I a score=-1531.000000 s hg38.chr19_GL383574v1_alt 43410 2 + 155864 -GG s panTro5.chr19 36112013 2 + 61309027 -GG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858066 2 + 64411610 -GG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275797 2 - 8369475 -GG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870569 2 - 106955855 -GG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34632375 2 + 59248254 -GA i macFas5.chr19 I 332 C 0 s calJac3.chr22 28531670 2 + 49145316 -AA i calJac3.chr22 C 0 I 7 s saiBol1.JH378197 5376217 2 + 8899380 -AA i saiBol1.JH378197 C 0 I 7 s aotNan1.NW_018505377v1 337502 2 - 4471408 -AA i aotNan1.NW_018505377v1 C 0 I 7 s otoGar3.GL873654 5451139 2 + 5549422 -AA i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111067939 2 - 145441459 -AA i mm10.chr7 C 0 I 8 s canFam3.chr1 4590122 2 - 122678785 -GA i canFam3.chr1 I 8 C 0 s dasNov3.JH563638 286826 2 + 643850 CA- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 557831 48 + 2501019 I e micMur3.chr22 3939360 51 - 30143674 I e chlSab2.chr6 29237714 333 + 50890351 I e cebCap1.NW_016107633v1 1585722 1430 - 2680843 M e colAng1.NW_012111697v1 2297194 804 + 4274983 I e manLeu1.NW_012102454v1 861361 333 - 2385121 I e cerAty1.NW_012005268v1 5430539 347 + 7714307 I e macNem1.NW_012011689v1 4499979 334 - 13342542 I e rheMac8.chr19 30179117 334 + 53671032 I a score=166132.000000 s hg38.chr19_GL383574v1_alt 43412 14 + 155864 AAATGTGAATCTCT----- s panTro5.chr19 36112015 14 + 61309027 AAATGTGAATCTCT----- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858068 14 + 64411610 AAATGTGAATCTCT----- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275799 14 - 8369475 AAATGTGAATCTCT----- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870571 14 - 106955855 AAATGTGAATCTCT----- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179451 14 + 53671032 AAATGTAAATCTCT----- i rheMac8.chr19 I 334 C 0 s macFas5.chr19 34632377 14 + 59248254 AAATGTAAATCTCT----- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4500313 14 - 13342542 AAATGTAAATCTCT----- i macNem1.NW_012011689v1 I 334 C 0 s cerAty1.NW_012005268v1 5430886 14 + 7714307 AAATGTAAATCTCT----- i cerAty1.NW_012005268v1 I 347 C 0 s chlSab2.chr6 29238047 14 + 50890351 AAATGTAAATCTCT----- i chlSab2.chr6 I 333 C 0 s manLeu1.NW_012102454v1 861694 14 - 2385121 AAATGTAAATCTCT----- i manLeu1.NW_012102454v1 I 333 C 0 s calJac3.chr22 28531679 14 + 49145316 AAATGTGAATCTCT----- i calJac3.chr22 I 7 C 0 s saiBol1.JH378197 5376226 14 + 8899380 AAATAAGAATCTCT----- i saiBol1.JH378197 I 7 C 0 s cebCap1.NW_016107633v1 1587162 14 - 2680843 AAATGTGAATCTCT----- i cebCap1.NW_016107633v1 M 1430 C 0 s aotNan1.NW_018505377v1 337511 14 - 4471408 AAATGTGAATCTCT----- i aotNan1.NW_018505377v1 I 7 C 0 s proCoq1.NW_012149263v1 557879 14 + 2501019 AAATGTGAATCTCT----- i proCoq1.NW_012149263v1 I 48 C 0 s otoGar3.GL873654 5451141 14 + 5549422 AAATGAGAATCTCT----- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111067949 13 - 145441459 AAACATTAGTCTT------ i mm10.chr7 I 8 C 0 s canFam3.chr1 4590124 14 - 122678785 AAATGTTAATTTTC----- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 286828 19 + 643850 CAATATATATTATTCATCT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3939360 51 - 30143674 I e colAng1.NW_012111697v1 2297194 804 + 4274983 I a score=242151.000000 s hg38.chr19_GL383574v1_alt 43426 16 + 155864 TTAAATGGAGAAGGAA s panTro5.chr19 36112029 16 + 61309027 TTAAATGGAGAAGGAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858082 16 + 64411610 TTAAATGGAGAAGGAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275813 16 - 8369475 TTAAATGGAGAAGGAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870585 16 - 106955855 CTAAATGGAGAAGGAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179465 16 + 53671032 TTAAATGGAGAAGGAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34632391 16 + 59248254 TTAAATGGAGAAGGAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4500327 16 - 13342542 TTAAATGGAGAAGGAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5430900 16 + 7714307 TTAAATGGAGAAGGAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29238061 16 + 50890351 TTAAATGGAGAAGGAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 861708 16 - 2385121 TTAAATGGAGAAGGAA i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28531693 16 + 49145316 TTAAATGGAGAAGCAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376240 16 + 8899380 TTAAATGGAGAAGGAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1587176 16 - 2680843 TTAAATGGAGAAGGAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 337525 16 - 4471408 TTAAATGGAGAAGGAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3939411 16 - 30143674 TTAAATGAAGGAAGAA i micMur3.chr22 I 51 C 0 s proCoq1.NW_012149263v1 557893 15 + 2501019 -TAAATGGAGGAAGAA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5451155 15 + 5549422 -TAAGAGGAAGAAGAA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111067962 16 - 145441459 TCAAGCTGAGAAAGAA i mm10.chr7 C 0 C 0 s canFam3.chr1 4590138 16 - 122678785 TTAAGTGGAGGGAGAA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 286847 16 + 643850 TTTAATGGAGGTAGCA i dasNov3.JH563638 C 0 C 0 e colAng1.NW_012111697v1 2297194 804 + 4274983 I a score=222808.000000 s hg38.chr19_GL383574v1_alt 43442 18 + 155864 GAGACACATTCTT----AATAG s panTro5.chr19 36112045 18 + 61309027 GAGACACATTCTT----AATAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858098 18 + 64411610 GAGACACATTCTT----AATAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275829 18 - 8369475 GAGACACATTCTT----AATAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870601 18 - 106955855 AAGACACATGCTT----AATAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179481 18 + 53671032 GAGACACTTTCTT----AATAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34632407 18 + 59248254 GAGACACTTTCTT----AATAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4500343 18 - 13342542 GAGACACTTTCTT----AATAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5430916 18 + 7714307 GAGACACTTTCTT----AATAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29238077 18 + 50890351 GAGACACTTTCTT----AATAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 861724 18 - 2385121 GAGACACTTTCTT----AATAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2297998 18 + 4274983 GAGACACTTTCTT----ATTAG i colAng1.NW_012111697v1 I 804 C 0 s calJac3.chr22 28531709 18 + 49145316 GAGACACGTTCTT----AATAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376256 18 + 8899380 GAGACACATTCTT----AATAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1587192 13 - 2680843 GAGACACATT---------TAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 337541 18 - 4471408 GAGACACATTCTT----AATAG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3939427 17 - 30143674 GAGACACAT-CTT----AATAG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 557908 17 + 2501019 GAGACACAT-CTT----AATAG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5451170 21 + 5549422 GAGGCACAG-CGTAGTAAATAG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111067978 18 - 145441459 GAGACAATGCTGT----ACTAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4590154 17 - 122678785 AAGACACAT-TTT----AATAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 286863 18 + 643850 GAGGCATTCTTTT----GACGG i dasNov3.JH563638 C 0 I 195 a score=2493242.000000 s hg38.chr19_GL383574v1_alt 43460 171 + 155864 AGATAGCTCCC--TACACCAAACACTGGAGTTACCTTAC----TGTCTCTTTTAT-ATGGCTTTTGATAATTCTCCAGGAAACCAGTTATTTGAGTAATCGGTTTTATGGAAGGAGAAAAA-CT-AAGAGAGCGCATATGAAAATGGTGTTGAATAACTTCTTCCAATCATCATAAACTT s panTro5.chr19 36112063 171 + 61309027 AGATAGCTCCC--TACACCAAACACTGGTGTTACCTTAC----TGTCTCTTTTAT-ATGGCTTTTGATAATTCTCCAGGAAACCAGTTATTTGAGTAATCGGTTTTATGGAAGGAGAAAAA-CT-AAGAGAGCGCATATGAAAATGGTGTTGAATAACTTCTTCCAATAATCATAAACTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858116 171 + 64411610 AGATAGCTCCC--TACACCAAACACTGGTGTTACCTTAC----TGTCTCTTTTAT-ATGGCTTTTGATAATTCTCCAGGAAACCAGTTATTTGAGTAATCGGTTTTATGGAAGGAGAAAAA-CT-AAGAGAGCGCATATGAAAATGGTGTTGAATAACTTCTTCCAATAATCATAAACTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6275847 171 - 8369475 AGATAGCTCCC--TACACCAAACACTGGTGTTACCTTAC----TGTCTCTTTTAT-ATGGCTTTTGATAATTCTCCAGGAAACCAGTTATTTGAGTAATCGGTTTTATGGAAGGAGAAAAA-CT-AAGAGAGCGCATATGAAAATGGTGTTGAATAACTTCTTCCAATAATCATAAACTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870619 171 - 106955855 AGATAGCTCCC--TACACCAAACACTGGTGTTACCTTAC----TGTCTCTTTTAT-ATGGCTTTTGATAATGCTCCAGGAAACCAGTTATTTGAGTAATCAGTTTTATGGAAGGAGAAAAA-CT-AAGAGAGTGCATATGAAAATGGTGTTGAATAACTTCTTCCAGTAATCATAAACTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179499 171 + 53671032 AGATAGCTCCC--TACACCAAACACTGGTGTTACCTTAC----CGTCTCTTTTAT-ATGGCTTTCGATAATTCTCCAGGAAACCAGTTATTTGAGTAATCAGTTTTATAGAAGGAGAAAAA-CT-AAGAGAGTGCATATGAAAATGGTGTTGAGTAACTTCTTCCAGTCATCACAAACTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34632425 171 + 59248254 AGATAGCTCCC--TACACCAAACACTGGTGTTACCTTAC----CGTCTCTTTTAT-ATGGCTTTCGATAATTCTCCAGGAAACCAGTTATTTGAGTAATCAGTTTTATAGAAGGAGAAAAA-CT-AAGAGAGTGCATATGAAAATGGTGTTGAGTAACTTCTTCCAGTCATCACAAACTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4500361 171 - 13342542 CGATAGCTCCC--TACACCAAACACTGGTGTTACCTTAC----TGTCTCTTTTAT-ATGGCTTTCGATAATTCTCCAGGAAACCAGTTATTTGAGTAATCAGTTTTATAGAAGGAGAAAAA-CT-AAGAGGGTGCATATGAAAATGGTGTTGAGTAACTTCTTCCAGTCATCACAAACTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5430934 171 + 7714307 AGATAGCTCCC--TACACCAAACACTGGTGTTACCTTAC----TGTCTCTTTTAT-ATGGCTTTCGATAATTCTCCAGGAAACCAGTTATTTGAGTAATCAGTTTTATAGAAGAAGAAAAA-CT-AAGAGAGTGCATATGAAAATGGTGTTGAGTAACTTCTTCCAGTCATCACAAACTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29238095 168 + 50890351 AGATAGCTCCC--TACACCAAACACTGGTGTTACCTTAC----TGTCTCTTTTAT-ATGGCTTTCGATAATTCTCCAGGAAACCAGTTATTTGAGTAATCAGTTTTAT---AGGAGAAAAA-CT-AAGAGAGTGCATATGAAAATGGTGTTGAGTAACTTCTTCCAGTCATCACAAACTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 861742 171 - 2385121 AGATAGCTCCC--TACACCAAACACTGGTGTTACCTTAC----TGTCTCTTTTAT-ATGGCTTTCGATAATTCTCCAGGAAACCAGTGATTTGAGTAATCAGTTTTATAGAAGAAGAAAAA-CT-AAGAGAGTGCATGTGAAAATGGTGTTGAGTAACTTCTTCCAGTCATCACAAACTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2298016 171 + 4274983 AGATAGCTCCC--TACACCAAACACTGGTGTTACCTTAC----TGTCTCTTTTAT-ATGGCTTTCGATAATTCTCCAGGAAACCAGTTATTTGGGTAATCAGTTTTATAGAAGGAGAAAAA-CT-AAGAGAGTGCATATGAAAATGGTGTTGAGTAACTTCTTCCAGTCATCATAAACTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28531727 171 + 49145316 AGATAGCTGCC--TACACCAAACATTGGTGGTACCTTAC----TGTCTCTTATAT-AT-GCCTTTGATAATTCTCCAGGGAACCAGTTATTTGAGTAATCAGTTTTAAGGAATAAAAAAAATCT-GAGAGAGAGCAAATGAAAATGGTGTTGAATAACTTCTTCCAATCATCATAAACTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376274 171 + 8899380 AGATAGGTGCC--TACACCAAACATTGGTGGTACCTTAC----TGTCTCTTATAT-ATGGCCTTTGATAATTCTCCAGGGAACCAGTTATTTGAGTAATCAGTTTTATGGAATGAAAAAAA-AT-AAGAGAGAGCAAATGAAAATGGTGTTGAATAACTTCTTCCAATCATCATAAACTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1587205 171 - 2680843 AGATAGCCACC--TACACCAAACATTGGTGGTACCTTAC----TGTCTCTTATAT-ATGGCCTTTGATAATTCTCCAGGGAACCAGTTATTTGAGTAATCAGTTTTATGGAATGAAAAAAA-CT-AAGAGAGAGCAAATCAAAATGGTGTTGAATAACTTCTTCCAATCATCGTAAACTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 337559 171 - 4471408 AGATAGCTGCC--TACACCAAACATTGGTGGTACCTTAC----TGTCTCTTATAT-ATGGCCTTTGATAATTCTCCAGGGAGCCAGTTATTTGAGTAATCAGTTTTATGGAATGAAAAAAA-CT-AAGAGTGAGCAAATGAAAATGGTGTTGAATAACTTCTTCCAATCATCATAAATTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3939444 171 - 30143674 AGATAACTGCT--TATACCAGAGACTGGTGTTATCTTAC----TGTCTCTTATAT-ATGGCTTTCAATAATTCTCCAGGGAACCAGTTATTTGAGTAATCAG-TTTATGGAAAGAGGAAAA-CCCAAGACAGCACAAATCAAAATGGTATTGAATAACTTCTTCCAACCATCATGAACTT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 557925 172 + 2501019 AGATAACTGCC--TATACCAGGGACTGGTGTTATCTTAC----AGTCTCTTATAT-ATGGCTTTCGATAATTCTCCAGGGAACCAGTTATTTGAGTAATCAGTTTTATGGAAGGAAGAAAA-CCCAAGACAAAACAAATCAAAATGGAATTGAATAACTTCTTCCAACTATCATGAACTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5451191 159 + 5549422 AGACAGCTGCC--TATACCAAAGACTTGTGCTATCTTAC----TGTCTCTTGCAT-AATGCTTTCCAGAATTCTCCAGGGAACCATTTATTTCAGTAATCAGTTCTATGGAAGGAGAAAAA-CC-------------ATCAGAATGGTGTTGAATAACTTCTTCCAACTGTTAGGAACAT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111067996 157 - 145441459 GGGTGGCTCCC--CATGCCAGCCCCTGCTCTTACCTTATTTAGTGTCTTTTACAT-ACGTC--------ATTATTCAGTTACCTA---CTTTGAGTAATGAGCTTTGTGGAAACAAAAACA--T-AGGTGAACATAAATTAGAATGGTATTGAGGTACAACTT---ATAACCATAAA--- i mm10.chr7 C 0 C 0 s canFam3.chr1 4590171 145 - 122678785 AGATAGCT-----TACACCAAAGAGTGATGTTAGCTGAC----TGACT-----------------GATAGTTCTCCAGGGAAATAGTTACTTAAGTTACCAACTTTATGGAATAAGAAGAA-CC-CAGAAAACATAAGTCAAACTGTTTTT-------TTTTTTTtttttttttaagatt i canFam3.chr1 C 0 I 607 s dasNov3.JH563638 287076 158 + 643850 AGAAAGCTGCCTTTATAGCAAAGACTGGCATTACTTTAT----TCTCCCTCATATAATATCTTTTGATAGTT-TTCAGGGAACCAGTTATTTTAGTAATCTG-------------GAAAAA----AAGAGAGCACATATCAAAAAGGTGTTGACAAACTTCTTCCAATCACTGTAAATTT i dasNov3.JH563638 I 195 C 0 a score=1147711.000000 s hg38.chr19_GL383574v1_alt 43631 89 + 155864 CTACTT--GATCTCCTTattcattcattcagtagtatttacagagtatctggcatgtgc---ttaacactagtggtgaacacacag-----aaaaggtc s panTro5.chr19 36112234 89 + 61309027 CTACTT--GATCTCCTTattcgttcattcagtagtatttacagagtatctggcatgtgc---ttaacactagtggtgaacacacag-----aaaaggtc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858287 89 + 64411610 CTACTT--GATCTCCTTattcgttcattcagtagtatttacagagtatctggcatgtgc---ttaacactagtggtgaacacacag-----aaaaggtc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6276018 89 - 8369475 CTACTT--GATCTCCTTattcattcattcagtagtatttacagagtatctggcatgtgc---ttaacactagtggtgaacacacag-----aaaaggtc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870790 89 - 106955855 CTACTT--GATCTTCTTattcattcattcagtagtatttacagagtgtctggcatgtgc---ttaacactaatagtgaacacacag-----aaaaggtc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179670 89 + 53671032 CTGCTT--GATCTTCTTattcattcattccgtagtatttacagagtgtctggcatgtac---ttaacactagtagtgaacacaaag-----aaaaggtc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34632596 89 + 59248254 CTGCTT--GATCTTCTTATTCATTCATTCCGTAGTATTTACAGAGTGTCTGGCATGTAC---TTAACACTAGTAGTGAACACAAAG-----AAAAGGTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4500532 89 - 13342542 CTGCTT--GATCTTCTTattcattcattccgtagtatttacagagtgtctggcatgtgc---ttaacactagtagtgaacacaaag-----aaaatgtc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5431105 89 + 7714307 CTACTT--GATCTTCTTattcattcattccgtagtatttacagagtgtctggcatgtgc---ttaacactagtagtgaacacaaag-----aaaaagtc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29238263 89 + 50890351 CTACTT--GATCTTCTTATTCATTCATTCCGTAGTATTTACAGAGTGTCTGGCATGTGC---TTAACACTAGTAGTGAACACAAAG-----AAAAGGTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 861913 89 - 2385121 CTACTT--GATCTTCTTattcattcattccgtagtatttacagagtgtctggcatgtgt---ttaacactagtagtgaacacaaag-----aaaagatc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2298187 92 + 4274983 CTACTT--GATCTTCTTattcattcattccgtagtatttacagagtgtctggcatgtgcttattaacactagtagtgaacacagag-----aaaaggtc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28531898 85 + 49145316 CTACTT--GATCTTCtt----attcatttggtagtatttacggaatatctggtatgtgc---ttaacactagtagtgaacacacag-----aaaaggtc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376445 71 + 8899380 CTACTT--GATCTTATT---CATTCATTCAGTAGTATTTACAGAATATCTGGTATGTGC---TTA---------------ACACAG-----AAAAGGTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1587376 89 - 2680843 CTATTT--GATCTTCTTattcattcattcagtagtatttacggaatatctggtatgtgc---ttaacactagtagtgaacacacag-----aaaaggtc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 337730 86 - 4471408 CTACTT--GATCTTTtt---tattcattcagtagtatttatggaatatcttgtatgtgt---ttaacactagtagtgaacacacag-----aaaaggtc i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3939615 93 - 30143674 ATACTT--GATCTTTTTattcattcattctgcagtatttttttagtgtctggtttgtgc---ttgacactcgcagtgaatacacaacacagataagct- i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 558097 81 + 2501019 CTACCT--GATATTTTGATTCATTCTTTCAGCAGTATTTTTTTAGTATCTGATATGTGC---TTGACACTAGCAGTGAACACACAA------------- i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5451350 83 + 5549422 CTCCTT--GATCTTTT--TTCATTCATTCAGCAGTA---CTTGAGTAAATG-TATGTGC---TTGACACTAGCAGTGGATACACAA-----ATAATTTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111068153 73 - 145441459 ----------------TCTTCACTCGTGCAATCATGTATATTGCGTTCCTGGCATGTGC---GCT-TATTAGCAGAGAACA-AAAG-----GTAAGGTC i mm10.chr7 C 0 I 891 s canFam3.chr1 4590923 88 - 122678785 cTACTTTCGATCTTTTGattcatatatccaatagtatttattgagcatctaccatgtgc---ctgatactAACAACGAGCACACAG-----AACAA--- i canFam3.chr1 I 607 C 0 s dasNov3.JH563638 287234 89 + 643850 TGACTT--GATCTGCTTGCttattcattaagtagaatttattgaatgcctgctatgtcc---cttacgctaacactgaacacacag-----atatggtc i dasNov3.JH563638 C 0 C 0 a score=1545127.000000 s hg38.chr19_GL383574v1_alt 43720 132 + 155864 ctgccatcagtgagtgt-atgtcctggtagCCTTTAATACACTTCATGTttatattatgaaacagtttatagtaaga---ta-a---tatatgaagtatacatgta---------ttaat-----ata-------tgtt-----atatattttatatGCTTTAGGT s panTro5.chr19 36112323 132 + 61309027 ctgccatcagtgagtgt-atgtcctggtagCCTTTAATACACTTCATGTttatattatgaaacagtttatagtaaga---ta-a---tatatgaagtatacatgta---------ttaat-----ata-------tgtt-----atatattttatatGCTTTAGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858376 132 + 64411610 ctgccatcagtgagtgt-atgtcctggtagCCTTTAATACACTTCATGTttatattatgaaacagtttatagtaaga---ta-a---tatatgaagtatacatgta---------ttaat-----ata-------tgtt-----atatattttatatGCTTTAGGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6276107 132 - 8369475 ctgccatcagtgagtgt-atgtcctggtagCCTTTTATACACTTCATGTTTATATTATGAAACAGTTtatagtaaga---ta-a---tatatgaagtatacatgta---------ttaat-----ata-------tgtt-----atatattttatatgctttaggt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63870879 137 - 106955855 ctgccatcagtgagtgt-atgtcctGTTAGCCTTTAATACACTTCATGTttatattatgaaacagtttataataaga---ta-a---tatatgaagtatacatgta---------ttgat-----ata-------tgttatataatatatcttatGTGGTTTAGGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179759 130 + 53671032 ctgccatcagtgaatgt-atgtcctggtagCCTTTAATACACTTCATGTttatattatgaaacagtttataataaga---ta-a---tatatgaag--tacatgta---------ttagt-----ata-------tgtt-----atatattttatatgctttaggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34632685 130 + 59248254 CTGCCATCAGTGAATGT-ATGTCCTGGTAGCCTTTAATACACTTCATGTttatattatgaaacagtttataataaga---ta-a---tatatgaag--tacatgta---------ttagt-----ata-------tgtt-----atatattttatatgctttaggt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4500621 130 - 13342542 ctgccatcagtgaatgt-atgtcctggtagCCTTTAATACACTTCATGTTTATATTATGAAACAGTTTATAATAAGA---TA-A---TATATGaag--tacatgta---------ttagt-----ata-------tgtt-----atatattttatatgctttaggt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5431194 130 + 7714307 ctgccatcagtgaatgt-atgtcctggtagCCTTTAATACACCTCATGTttatattatgaaacagtttatagtaaga---ta-g---tatatgaag--tacatgta---------ttagt-----ata-------tgtt-----atatattttatatgctttaggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29238352 130 + 50890351 CTGCCACCAGTGAATGT-ATGTCCTGGTAGCCTTTAATACACTTCATGTttatattatgaaacagtttataataaga---ta-a---tatatgaag--tacatgta---------ttagt-----ata-------tgtt-----atatattttatatgctttaggt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 862002 130 - 2385121 ctgccatcagtgaatgt-atgtcctggtagCCTTTAATACACTTCATGTTTATATTATGAAACAGTTTATAATAAGA---TA-A---TATATGAAG--TACGTGTA---------TTAGt-----ata-------tgtt-----atatattttatatgctttaggt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2298279 130 + 4274983 ctgccatcagtgaatgt-gtgtcctagtagCCTTTAATACACCttatgtttatattatgaaacagtttgtaataaga---ta-a---tatatgaag--tacatgta---------ttaat-----ata-------tgtt-----atatattttatatGCTTTAGGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28531983 131 + 49145316 ctgccatcagtgagtgt-atgtcctagtagCCTTTAACACACTTCATGTTTATATTATGAAACAGTTTA-AATGAGA---TA-A---TATATGAAGtatatatgta---------ttaac-----ata-------tatt-----ttaaaatatatatGCTTTAGGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376516 136 + 8899380 CTGCCATCAGTGAGTGT-ATGTCCTGGTAGCCTTTAACACACTTCATGTTTATATTATGAAACAGTTTA-AATGAGA---TA-A---TATATGAAGtatatatgta---------ttaacatataata-------tatt-----ttaatatatatatGCTTTAGGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1587465 131 - 2680843 ctgccatcagtgagtgt-ttgtcctggtagCCTTTAACACACTTCATGTTTATATTATGAAACAGTTTA-AATGAGa---ta-a---tatatgaagtatatatgta---------ttaac-----ata-------tatt-----ttaaaatatatatGCtttaggt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 337816 136 - 4471408 ctgccatcagtgagtgt-atgtcctggtagCCTTTAACACACTTCATGTTTATGTTATGAAACAGTTTA-AATGAGa---ta-a---tatatgaagtatatatgta---------ttaacatataata-------tatt-----ttaaaatatatatGCTTTAGGT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3939708 124 - 30143674 ctcccatcaatgaactc-atatcccagtgTCCTTTAATTTACTTCATGTGTATATTGTAAAATATTTTATAATAAGA---TA-A---TATATGAAG--TATATATGTTAAATATTTTAAA-----ATA------TTATT---------------------TTAAGT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 558178 114 + 2501019 ---CCATCAATGAACTT-ACATCCTAGTATCCTTTAATTTACTTAATATTTATATTATGAAATATTTTATAATAAGAAATTA-A---TGTATGAAG--TATATATA---------TTAAA-----ATA-------TATT---------------------TTAGGT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5451433 111 + 5549422 CTTCCATCATTGAACTTAATATTACAGTAGCCtttaatatactt------tatattatgaaatgttttata---------tata---tatgtttat--taaatata---------ttgaa-----ataataaatCTACT---------------------TTAGGT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4591011 123 - 122678785 -TAACATCAGTGAGCTT-ATATCCTTTTGGTCATTAGTACACTCCATATTTGTATTATG-AGTATTTTATATTAAGA---TA-AATGAATATGTAG--TATGCATA---------T---------ATA-------TATT-----CTATA----ATACATTTTAGGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 287323 88 + 643850 ctgccatcagtgagta--atatcccaatagTTTTTAGTAATCTTCGtttttatattatgaaatatttta-----------ta-a---t----------taGATGTG---------CTAAT-----ATA-------C------------------------------ i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111068226 891 - 145441459 I a score=1704866.000000 s hg38.chr19_GL383574v1_alt 43852 134 + 155864 T----TAAGTTAAAGTTT-TTA---TAAAATGTTCCTCAGCTTAATG-TAACTATAAGTAAAAATGTAAATGGTTTTA--------------------------------------------------------------------------TGTGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTTTCTACGTC-------TGTGAATTTAATAGTAGGCCTCAAATGATTGAAAATAAGA s panTro5.chr19 36112455 134 + 61309027 T----TAAGTTAAAGTTT-TTA---TAAAATGTTCCTCAGCTTAATG-TAACTATAAGTAAAAAAGTAAATGGTTTTA--------------------------------------------------------------------------TGTGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTTTCTACGTC-------TGTGAATTTAATAGTAGGCCTCAAATGATTGAAAGTAAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858508 133 + 64411610 T----TAAGTTAAAGTTT-TTA---TAAAATGTTCCTCAGCTTAATG-TAACTATAAGTAAAAA-GTAAATGGTTTTA--------------------------------------------------------------------------TGTGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTTTCTACGTC-------TGTGAATTTAATAGTAGGCCTCAAATGATTGAAAATAAGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6276239 134 - 8369475 t----taagttaaagttt-tta---taaaatgttCCTTAGCTTAATG-TAACTATAAGTAAAAATGTAAATGGTTTTA--------------------------------------------------------------------------TGTGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTTTCTACATC-------TGTGAATTTAATAGTAGGCCTCAAATGATTGAAAATAAGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871016 132 - 106955855 T----TAAGTTAAAGTTT-TTA---TAAAATGTTCCTCAGCTTAATG-TAACTATAAGTAAAAATGTAAATGGTTTTA--------------------------------------------------------------------------TGTGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTTTCTACATC-------TGTGAATTTAATAGTAGGCCT--ATTCGGTGAAAATAAGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30179889 141 + 53671032 t----taagttaaagttt-TTA---TAAAATGTTCCTCCACTTAATA-TAACTATAAGTAAACATGTAAATGGTTTTA--------------------------------------------------------------------------TGTGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTTTCTGCATCTCTTTCATGTGAATATAATAGTAGGCCTTAAATGATTGAAAATAAGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34632815 141 + 59248254 t----taagttaaagttt-TTA---TAAAATGTTCCTCCACTTAATA-TAACTATAAGTAAACATGTAAATGGTTTTA--------------------------------------------------------------------------TGTGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTTTCTGCATCTCTTTCATGTGAATATAATAGTAGGCCTCAAATGATTGAAAATAAGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4500751 139 - 13342542 t----taagttaaagttt-tta---taaaatgttCCTCCACTTAATA-TAACTATAAGTAAACATGTAAATGGTTTTA--------------------------------------------------------------------------TGTGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTTTCTGCATCTCTTTCATGTGAATATAATAGTAGGCCTCAAATGATTGAAAATA--A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5431324 141 + 7714307 t----taagttaaagttt-TTA---TAAAATGTTCCTCCGCTTAATA-TAACTATAAGTAAACATGTAAATGGTTTTA--------------------------------------------------------------------------TGTGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTTTCTGCATCTCTTTCATGTGAATTTAATAGTAGGCCTCAAATGATTGAAAATAAGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29238482 141 + 50890351 t----taagttaaagttt-TTG---TAAAATGTTCCTCCGCTTAATA-TAACTATAAGTAAACATGTAAATGGCTTTA--------------------------------------------------------------------------TGTGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTTTCTGCATCTCTTTCGTGTGAATTTAATAGTAAGCCTCAAATGATTGAAAATAAGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 862132 141 - 2385121 t----taagttaaagttt-tta---taaaatgttCCTCCACTTAATA-TAACTATAAGTAAACATGTAAATGATTTTA--------------------------------------------------------------------------TGTGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTTTCTGCATCTCTTTCATGTGAATATAATAGTAGGCCTCAAATGATTGAAAATAAGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2298409 141 + 4274983 T----TAAGTTAAAGTTT-TTA---TAAAATGTTCCTCCGCTTAATG-TAACTATAAGTAAACATGTAAATGGTTTTA--------------------------------------------------------------------------TGTGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTTTCTGCATCTCTTTCCTGTGAATTTAATAGTAGGCCTCAAATGATTGAAAATAAGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28532114 133 + 49145316 T----TAAGTTAAAGTTT-TTA---TAAAATGTTCCTCAGCTTAA-------TATAAGTAAAAATGTAAATGGTTTTA--------------------------------------------------------------------------CATGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTCTCTACATCTCTTTCCTGTGAATGTAATAGTAGGCCTCAAATGATTGAAAATA--A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376652 139 + 8899380 T----TAAGTTAAAGTTT-TTA---TAAAATGTTCCTCAGCTTAATG-TAAGTATAAGTAAAAATGTAAATGGTTTTA--------------------------------------------------------------------------CGTGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTTTCTACATCTCTTTCCTGTGAATTTAATAGTAGGCCTCAAATGATTGAAAATA--A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1587596 139 - 2680843 t----taagttaaagttt-taa---taaaatgttcctcagcttaatg-taagtataagtAAAAATGTAAATGGTTTTA--------------------------------------------------------------------------CGTGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTTTCTACATCTCTTTCCTGTGAATTTAATAGTAGGCCTCAAATGATTGAAAATA--A i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 337952 139 - 4471408 T----TAAGTTAAAGTTT-TTA---TAAAATGTTACTCAGCTTAATG-TAAGTATAAGTAAAAATGTAAATGGTTTTA--------------------------------------------------------------------------CGTGGG---------------------------------------------------------------------------------------------------ATATGT---------------------TTGTTTCTACATCTCTTTCCTGTGAATTTAATAGTAGGCCTCAAATGATTGAAAATA--A i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3939832 143 - 30143674 TT-GGTAAGTTAGGGTTT-TTA---TAAAATGCTCCTCAACTCAATG-TAACTGCAGATAAAAATGTAAATGGTGTTG--------------------------------------------------------------------------TGTGGG----------------------------------------------------------------------------------------------------TATGT---------------------TTGTTTCTGTATCTCTTTCCTGTGAATTTAATAGTAGGCCTCAAATGATTGAAAGTGAAA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 558292 143 + 2501019 TT-GGTCAGTTAGGGTTT-TTA---TAAAATGTTCCTCAACTTAATG-TAACTGTAGATAAAAATGTAAATCGTTTTG--------------------------------------------------------------------------TGTGGG----------------------------------------------------------------------------------------------------TATGT---------------------TTGTTTCTGTATCTCTTTCCTGTGAATTTAATAGTAGGCCTCAAACGATTGAAAGTGAGA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5451544 137 + 5549422 TA-GGTAAGTTAAAGTTT-TCC---TAAAATGTTCCACTACTTAATG-TAATTATAGATTAACTGTCAAGCTGTTTTG--------------------------------------------------------------------------TGTGTG----------------------------------------------------------------------------------------------------TG--------------------------GTTTCTGCATTTC-TTCCCATGAATTTAATAGGAGGCCTCACATGATTGAAAGGAAGA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111069117 137 - 145441459 T----CACATTACAGCTTATTA---TAAAATGTTCCTTGACTTAATC-TAAAGATC--TTAAAACATAAACAGTTTTG--------------------------------------------------------------------------TGTAGG-----------------------------------------------------------------------------------------------------ATGT---------------------TTGTTTCTGCATC-CTTTTCTATGAATTCAACAGTAGGCCTCCGGTAATTGAAAACAAAA i mm10.chr7 I 891 I 610 s canFam3.chr1 4591134 341 - 122678785 -TTAGTAAACTGAAATTT-TTATGTTGTAATGTTCTTTAACTTAATGATAAAAATAATATAAAATGTAAATGGTCTTggggcacctgggtggctcagttggttaagcatctgactcttgatctgatctcagctcaggtcttgatcttagggttgtgagtttaagccctgcattcagtaggctccatgctagatgtagagcctgcaatcaatcaatcaatcaatcaatAAGTAAGTAAGtacatacatacatacatacatacgtacataGTCTTGTGTAGGGTAGCTTTTTCTGCATCTCTTTCCTATAAATTTAATAGTGCACCTCAAATGATTGAAA-TAAGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 287411 62 + 643850 --------------------------------------------------------------------------------------------------------------------------------------------------------TAAGGG------------------------------------------------------------------------------------------------------TGT---------------------GTGTGTGTAAAAC-------TGTAAATTTAATAGTGTACCTCAAATGACTGAAAATAAGA i dasNov3.JH563638 C 0 C 0 a score=806682.000000 s hg38.chr19_GL383574v1_alt 43986 71 + 155864 GTAAAATCATACGTGAG-------ATTT----------ATATCAACATCAGACTAAAACTCATT-ATTACTAAGTGTGATTTTTCTCAT s panTro5.chr19 36112589 71 + 61309027 GTAAAATCATACGTGAG-------ATTT----------ATATCAACATCAGACTAAAACTCATT-ATTACTAAGTGTGATTTTCCTCAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858641 71 + 64411610 GTAAAATCATACGTGAG-------ATTT----------ATATCAACATCAGACTAAAACTCATT-ATTACTAAGTGTGATTTTCCTCAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6276373 71 - 8369475 GTAAAATCATACGTGAG-------ATTT----------ATATCAACATCAGACTAAAACTCATT-GTTACTAAGTGTGATTTTTCTCAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871148 71 - 106955855 GTAAAATCGCACGTGAG-------ATTT----------ATATCAACATCAGACTAAAACCCATT-ATTACTAAGTGTGATTTTTCTCAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180030 71 + 53671032 GTGAAATCACATGTGAG-------ATTT----------ATATCAGCATCAGACTAAAACCCATT-ATTACTAAGTGTGATTTTTCTCAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34632956 71 + 59248254 GTGAAATCACATGTGAG-------ATTT----------ATATCAGCATCAGACTAAAACCCATT-ATTACTAAGTGTGATTTTTCTCAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4500890 71 - 13342542 ATGAAATCACATGTGAG-------ATTT----------ATATCAGCATCAGACTAAAACCCATT-ATTACTAAGTGTGATTTTTCTCAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5431465 71 + 7714307 GTGAAATCACATGTGAG-------ATTT----------ATATCAACATCAGACTAAAACCCATT-ATTACTAAGTATGATTTTTCTCAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29238623 71 + 50890351 GTGAAATCACATGTGAG-------ATTT----------ATATCAGCATCAGACTAAAACCCATT-ATTACTAACTGTGATTTTTCTCAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 862273 71 - 2385121 GTGAAATCACATGTGAG-------ATTT----------ATATCAGCATCAGACTAAAACCCATT-ATTACTAAGTGTGATTTTTCTCAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2298550 69 + 4274983 GTGAAATCACATGTGAG-------ATTT----------ATATCAACATCAGACTAAAACCCATT-ATTACTAAGTGTGATTTTTCTC-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28532247 71 + 49145316 GTAAAATCACAAGTGAG-------ATTT----------ATATCAGCATCAGACTAAAACTCAGT-ATTACTAAAAGTTACTTTTCTCAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376791 62 + 8899380 GTGAAGTCACAAGTGAG-------ATTT----------ATATCAGCATCAGACTAAAACTCAGT-ATTACCAAAAGTTAC--------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1587735 71 - 2680843 GTAAAATCACAAGTGAG-------ATTT----------ATATCAGCATCAGACTAAAACTCAGT-ATTACTAAAAGTTACTTTTCTCAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 338091 71 - 4471408 GTAAAATCACAAGTGAG-------ATTT----------ATATCAGCATCAGACTAAAACTCAGT-ATTACTAAAAGTTACTTTTCTCAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3939975 52 - 30143674 ATAAA-----------------------------------ATCAGCACCAGAC-AAAACCCAGT-ATTACTAAATGTGATTTTTCTCAT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 558435 52 + 2501019 ATAAA-----------------------------------ATCAGCACCAGAC-AAAATCCAGT-ATTACTAAATGTGATTTTTGTCAT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5451681 46 + 5549422 AGAAA-----------------------------------GTCAGTGCCAGAC--AAACCCAGG-ATTACTAAACATGATTTTT----- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4591475 78 - 122678785 GCAGAATCACAGGTAGGATACCTTATTT----------TTGTAAGCACCAGACTAAAACTCAGT-ATAACCAAATGTAATTTTTCCCAT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 287473 82 + 643850 GTAAAATAAAAAGTGAG-------ATGTGTTTTTTTAAATTTCAGCACCAGGGTAAAACCCAGTAATAATTAAATGTGTTTTTTCCTTC i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111069254 610 - 145441459 I a score=358651.000000 s hg38.chr19_GL383574v1_alt 44057 31 + 155864 ----ATTTTTCTTTAAGCAAAGTTACTTT----ACTT------AA s panTro5.chr19 36112660 31 + 61309027 ----ATTTTTCTTTAAGCAAAGTTACTTT----ACTT------AA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858712 31 + 64411610 ----ATTTTTCTTTAAGCAAAGTTACTTT----ACTT------AA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6276444 31 - 8369475 ----ATTTTTCTTTAAGCAAAGTTACTTT----ACTT------AA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871219 31 - 106955855 ----ATTTTTCTTTAAGCAAAGTTACTTT----ACTT------AA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180101 31 + 53671032 ----ATTTTTCTTTAAGCAAAGTTACTGT----ACTT------AA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633027 31 + 59248254 ----ATTTTTCTTTAAGCAAAGTTACTGT----ACTT------AA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4500961 31 - 13342542 ----ATTTTTCTTTAAGCAAAGTTACTGT----ACTT------AA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5431536 31 + 7714307 ----ATTTTTCTTTAAGCAAAGTTACTTT----ACTT------AA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29238694 31 + 50890351 ----ATTTTTCTTTAAGCAAAGTTACTTT----ACTT------AA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 862344 31 - 2385121 ----ATTTTTCTTTAAGCAAAGTTACTGT----ACTT------AA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2298619 31 + 4274983 ----ATTTTGCTTTAAGCAAAGTTACTTT----ACTT------AA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28532318 33 + 49145316 ----ATTTTTCTTTAGGCAAAGTTACT--------TTTAAGAAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376853 35 + 8899380 ------TTTTCTTCAGGCAAAGTTACTTT----ACTTTAAGAAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1587806 37 - 2680843 ----ATTTTTCTTCAGGCAAAGTTACTTT----ACTTTAAGAAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 338162 37 - 4471408 ----GTTTTTCTTCAGGCAAAGGTACTTT----ACTTTAAGAAAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3940027 31 - 30143674 ----ATTTTTCTTTAAGCAATGTTACTTT----ACTT------AT i micMur3.chr22 C 0 I 38 s proCoq1.NW_012149263v1 558487 31 + 2501019 ----ATTTTTTTTTAAGCAATGTTACTTT----ACTT------AC i proCoq1.NW_012149263v1 C 0 I 4 s otoGar3.GL873654 5451727 21 + 5549422 -----TTTTTTTTT--GCAACTTTTCTT----------------- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111069864 33 - 145441459 ----ATTTTTCTATAAGCA--GTTACTTTATGAACTT------AG i mm10.chr7 I 610 C 0 s canFam3.chr1 4591553 28 - 122678785 ------GTTTTTTCAAACAAAGCTACTT-----ATTC------AG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 287555 39 + 643850 AATTTTTTTTCTTTAAGCAAAGTTACTTT----ATCTCCCC--AA i dasNov3.JH563638 C 0 C 0 a score=134487.000000 s hg38.chr19_GL383574v1_alt 44088 26 + 155864 GTAACTT---------T-----AATTCTTTCCTCAATCTA s panTro5.chr19 36112691 26 + 61309027 GTAACTT---------T-----AATTCTTTCCTCAATCTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858743 26 + 64411610 GTAACTT---------T-----AATTCTTTCCTCAATCTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6276475 26 - 8369475 GTAACTT---------T-----AATTCTTTCCTCAATCTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871250 22 - 106955855 GTAACT------------------TTCTTTCCTCAATCTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180132 22 + 53671032 GTAACT------------------TTCTTTCCTCAATCTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633058 22 + 59248254 GTAACT------------------TTCTTTCCTCAATCTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4500992 22 - 13342542 GTAACT------------------TTCTTTCCTCAATCTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5431567 22 + 7714307 GTAACT------------------TTCTTTCCTCAATCTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29238725 22 + 50890351 GTAACT------------------TTCTTTCCTCAATCTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 862375 22 - 2385121 GTAACT------------------TTCTTTCCTCAATCTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2298650 22 + 4274983 GTAACT------------------TTCTTTCCTCAATCTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28532351 24 + 49145316 ATAACTG---------T-------TTCTTTTCTCTCTCTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376888 24 + 8899380 GTAACTA---------T-------TTATTTTCTTTATCTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1587843 24 - 2680843 GTAACTA---------T-------TTCTTTTCTCTCTCTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 338199 24 - 4471408 GTAACTA---------T-------TGCTTTTCTCTATCTA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 558522 31 + 2501019 GTAACTTTTC----TTT-----AATTCTTTGCTAAATCTG i proCoq1.NW_012149263v1 I 4 I 3 s otoGar3.GL873654 5451748 19 + 5549422 ----------------T-----AATTCTTTGGTAAATCTG i otoGar3.GL873654 C 0 I 3 s mm10.chr7 111069897 28 - 145441459 -------GCCGCTGTTC-----ATTTATACCCTAAATCTA i mm10.chr7 C 0 I 3 s canFam3.chr1 4591581 30 - 122678785 TTAACTT---------TT-TTCAGTTCTTTCCTAAACATG i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 287594 31 + 643850 GTAATTT---------TTCTTCAGTTCTTTCCAAAACCCA i dasNov3.JH563638 C 0 I 3 e micMur3.chr22 3940058 38 - 30143674 I a score=6179857.000000 s hg38.chr19_GL383574v1_alt 44114 403 + 155864 TAAAAC---TCTTAATTCAAATGGGGAGTTTATTGTAGAAAAAAGTATTTGTAAGTCACATTGAGTATAATTGGCACA-----------------------T-TA----------------------------------------------------------------TAGACAGATACTGAAATCAAAAGGTTGTTTGGC---------TATT------------------------TTAATATTAAGTGCATATTG--------TAATTCA-----------TTTTATATCTAGTAGTTATAATTTAATAGTTTTC-TTAAAA----GTAAAAATCTGGAAT-TTTTTTTTTCGTTATATACATGTTGCTTAGAGCTTGGAAACATAACTCATGATTTTCCTTCAGTCCTCACTAGGCTCATCGACTTCTTCATTCCAGTCCATGGGTTCTTATGGACCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCGAGTTCCTTAGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGt-----tttcttt s panTro5.chr19 36112717 405 + 61309027 TAAAAC---TCTTAATTCAAATGGGGAGTTTATTGTAGAAAGAAATATTTGTAAGTCACATTGAGTATAATTGGCACA-----------------------T-TA----------------------------------------------------------------TAGACAGATACTGAAATCAAAAGGTTGTTTGGC---------TATT------------------------TTAATATTAAGTGCATATTG--------TAATTCA-----------TTTTATATCTAGTAGTTATAATTTAATAGTTTTC-TTAGAAG--TGTAAAAATCTGGATT-TTTTTTTTTCATTATATACATGTTGCTTAGAGCTTGGAAACATAACTCATGATTTTCCTTCAGTCCTCACTAGGCTCATCGACTTCTTCATTCCAGTCCATGGGTTCTTATGGACCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGt-----tttcttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39858769 404 + 64411610 TAAAAC---TCTTAATTCAAATGGGGAGTTTATTGTAGAAAGAAATATTTGTAAGTCACATTGAGTATAATTGGCACA-----------------------T-TA----------------------------------------------------------------TAGACAGATACTGAAATCAAAAGGTTGTTTGGC---------TATT------------------------TTAATATTAAGTGCATATTG--------TAATTCA-----------TTTTATATCTAGTAGTTATAATTTAATAGTTTTC-TTAAAAG--TGTAAAAATCTGGA-T-TTTTTTTTTCATTATATACATGTTGCTTAGAGCTTGGAAACATAACTCATGATTTTCCTTCAGTCCTCACTAGGCTCATCGACTTCTTCATTCCAGTCCATGGGTTCTTATGGACCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGt-----tttcttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6276501 404 - 8369475 TAAAAC---TCTTAATTCAAATGGGGAGTTTATTGTAGAAAAAAGTATTTGTAAGTCACATTGAGTATAATTGGCACA-----------------------T-TA----------------------------------------------------------------TAGACAGATACTGAAATCAAAAGGTTGTTTGGC---------TATT------------------------TTAATATTAAGTGCATATTG--------TAATTCA-----------TTTTATATCTAGTAGTTATAATTTAATAGTTTTC-TTAAAAG--TGTAAAAATCTGGA-A-TTTTTTTTTCATTATATACATGTTGCTTAGAGCTTGGAAACATAACTCATGATTTTCCTTCAGTCTTCACTAGGCTCATCGACTTCTTCATTCCAGTCCATGGGTTCTTATGGACCTTTCGGCCGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAgtttggtgctgttggtgttggtatgt-----tttcttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871272 402 - 106955855 TAAAAC---TC--AACTCAAATGGGGAGTTTATTGTAGAAAAAAGTATTTGTAAGTCACATTGAGTATAATTGGCACA-----------------------T-TA----------------------------------------------------------------TAGACAGATACTGAAATCAAAAGGTTGTTCGGC---------TATT------------------------TTAATATTAAGTGCAAATTG--------TAATTCA-----------TTTTATATCTAGTAGTTATAATTTAATAGTTTTC-TTAAAAG--TGTAAAAATCTGGA-A-TTTTTTTTTCATTATATACATGTTGCTTAGAGCTTGGAAAGATAACTCATGATTTTCCTTCAGTCCTCACTAGGCTCATCGACTTCTTCATTCCAGTCCATGGGTTCTTATGGGCCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGtatgt-----tttcttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180154 389 + 53671032 TAAAAC---TC-----TTAAATGGGGAGTTTAGTGTAG-AAAAAGTATTCGTAAGTTACATTGAGTATAATTGGCACA-----------------------T-TA----------------------------------------------------------------TAGACAAATATTGAAATCAGAAGGTCGTTTGGC---------TATT------------------------TTAATGTTAAGTGCATGTTG--------TAATTCG-----------TTTTATATT---TAGT-----TTTAATAGTTTTC-TTAAAAG--TGTAAAAATCTGGA-A--ATTTTTTTCATTATATACATGTTGCTTAGAGCTTGGAAAGATAACTCATGATTTTCCTTCAGTCCTCACTAGGCTCATCGACTTCTTCATTCCAGTCCATGGGTTCTTACGGGCCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGt-----tttcttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633080 392 + 59248254 TAAAAC---TC-----TTAAATGGGGAGTTTAGTGTAG-AAAAAGTATTCGTAAGTTACATTGAGTATAATTGGCACA-----------------------T-TA----------------------------------------------------------------TAGACAAATATTGAAATCAGAAGGTCGTTTGGC---------TATT------------------------TTAATGTTAAATGCCTGTTG--------TAATTCG-----------TTTTATATTTAGTAGT-----TTTAATAGTTTTC-TTAAAAG--TGTAAAAATCTGGA-A--ATTTTTTTCATTATATACATGTTGCTTAGAGCTTGGAAAGATAACTCATGATTTTCCTTCAGTCCTCACTAGGCTCATCGACTTCTTCATTCCAGTCCATGGGTTCTTACGGGCCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGt-----tttcttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501014 392 - 13342542 TAAAAC---TC-----TTAAATGGGGAGTTTAGTGTAG-AAAAAGTATTCGTAAGTTACATTGAGTATAATTGGCACA-----------------------T-TA----------------------------------------------------------------TAGACAAATATTGAAATCAGAAGGTCGTTTGGC---------TATT------------------------TTAATGTTAAGTGCATGTTG--------TAATTCG-----------TTTTATATTTAGTAGT-----TTTAATAGTTTTC-TTAAAAG--TGTAAAAATCTGGA-A--ATTTTTTTCATTATATACATGTTGCTTAGAGCTTGGAAAGATAACTCATGATTTTCCTTCAGTCCTCACTAGGCTCATCGACTTCTTCATTCCAGTCCATGGGTTCTTACGGGCCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGtttggtgctgttggtgttggtatgt-----tttcttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5431589 397 + 7714307 TAAAAC---TC-----TTAAATGGGGAGTTTAGTGTAG-AAAAAGTACTTGTAAGTTACATTGAGTATAATTGGCATA-----------------------T-TA----------------------------------------------------------------TAGACAGATATTGAAATCAGAAGGTCGTTTGGC---------TATT------------------------TTAATGTTAAGTGCATATTG--------TAATTCA-----------TTTTATATTTAGTAGTTATAATTTAATAGTTTTC-TTAAAAG--TGTAAAAATCTGGA-A--TTTTTTTTCATTATATACATGTTGCTTAGAGCTTGGAAAGATAACTCATGATTTTCCTTCAGTCCTCACTAGGCTCATCGACTTCTTCCTTCCAGTCCATGGGTTCTTACGGGCCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGt-----tttcttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29238747 397 + 50890351 TAAAAC---TC-----TTAAATGGGGAGTTTAGTGTAG-AAAAAGTATTCGTAAGTTACATTGAGTATAATTGGCACA-----------------------T-TA----------------------------------------------------------------TAGACAGATATTGAAATCAGAAGGTCGTTTGGC---------Tatt------------------------ttaatgttaagtgcatattg--------taattcg-----------ttttatatttagtagttataatttaatagtTTTC-TTAAAAG--TGTAAAAATCTGGA-A--TTTTTTTTCATTATATACATGTTGCTTAGAGCTTGGAAAGATAACTCATGATTTTCCTTCAGTCCTCACTAGGCTCATCGACTTCTTCATTCCAGTCCATGGGTTCTTACGGGCCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGt-----tttcttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 862397 390 - 2385121 TAAAAC---TC-----TTAAATGGGGAGTTTAGTGTAG-AAAAAGTATTCGTAAGTTACATTGAGTATAATTGGCACA-----------------------T-TA----------------------------------------------------------------TAGACAAATATTGAAATCAGAAGGTCGTTTGGC---------TATT------------------------TTAATGTTAAGTGCATAT----------TAATTCA-----------TTTTATATTTAGTAGT-----TTTAATAGGTTTC-TTAAAAG--TGTAAAAATCTGGA-A--ATTTTTTTCATTATATACATGTTGCTTAGAGCTTGGAAAGATAACTCATGATTTTCCTTCAGTCCTCACTAGGCTCATCGACTTCTTCATTCCAGTCCATGGGTTCTTACGGGCCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGtttggtgctgttggtgttggtatgt-----tttcttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2298672 400 + 4274983 TAAAAC---TC-----CTAAATGGGGAGTTTAGTGTAGAAAAAAGTATTTGTAAGTTACATTGAGTATAATTGGCACA-----------------------T-TA----------------------------------------------------------------TAGACAGATACTGAAATCAGAAGGTCGTTTGGC---------Tatt------------------------ttaatgttaagtgcatattg--------taattcg-----------ttttatatttagtagttataatttaatagtTTTC-TTAAAAG--TGTAAAAATCTGGA-ATTTTTTTTTTCATTATATACATGTTGCTTAGAGCTTGGAAAGATAACTCATGATTTTCCTTCAGTCCTCACTAGGCTCATCGACTTCTTCATTCCAGTCCATGGGTTCTTATGGGCCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGt-----tttcttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28532375 396 + 49145316 -AAAAC---TCTTAACTCAAATTGGGAGTTCATTGTAGAAAAAATTATTTGTAAGTCACAGTGAGTATAATTGGCACA-----------------------T-TA----------------------------------------------------------------TAGACAGACATTGAAATCAGAAAGTTCTTTGGC---------TGTT------------------------------TTAAATGCATATTG--------TAATTCA-----------TTTTATGTCTAGTAGttataatttaataattttc-ttaaaaa--tgtaaaaatCTGGA-A--ATTTTTTTTGTTATATACATGTTGCTTAGAGCTTGGAAATATAACCAATGATTTTCCTTCAGTCCTCACTAGGCTCATCGACTTCTTCATTCCAGTCCATGGGTTCTTATGGGCCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGt-----tttcttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5376912 396 + 8899380 TAAAAC---TCTTAACTCAAATGGGAAGTTTATTGTAGAAAAAAGTATTTGTAAGTCACATTGAGTATAATTGGCACA-----------------------T-TA----------------------------------------------------------------TAGACAGATAATGAAATCAGAAAGTTCTTTGGC---------TGTT------------------------------TTAAATGCATATTG--------TAATTCA-----------TTTTATATCTAGTAGTTATCATTTAATAGTTTTC-TTAAAAA--TGTAAAAATTTGGA-A--A-TTTTTTCATTATATACATGTTGCTTAGAGCTTGGAAATATAACCCATGATTTTCCTTCAGTCCTCACTAGGCTCATCGACTTCTTCCTTCCAGTCCATGGGTTCTTATGGGCCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGt-----tttcttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1587867 395 - 2680843 TAAAAC---TCTTAGCTCAAATGGGGAGTTTATTGTAGAAAAAAGTATTTGTAAGTCACATTGAGTATAATTGTCACA-----------------------T-TA----------------------------------------------------------------TAGACAGATATTGAAATCAGAAAGTTCTTTGGC---------TGTT------------------------------TTAAATGCATATTG--------TAATTCA-----------TTTTATATCTAGTAGTTATAATTTATTAGTTTTC-TTAAAAA----TAAAAATCTGGA-A--ATTTTTTTCATTATATACATGTTGCGTAGAGCTTGGAAATATAACCCATGATTTTCCTTCAGTCCTCACTAGGCTCATCGACTTCTTCATTCCAGTCCATGGGTTCTTATGGGCCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGt-----tttcttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 338223 391 - 4471408 TAAAAC---TCTT-----AAATGGGGAGTTTATTGTAGAAAAAAGTATTTGT-AGTCACATTGAGTATAATTGGCACG-----------------------T-TA----------------------------------------------------------------TAGGCAGATATTGAAATCAGAAAGTTCTTTGGC---------TGTT------------------------------TTAAATGCATGTTG--------TAATTCA-----------TTTTGTATCTAGTAGTTATAATTTAATAGTTTTC-TTAAAAA--TATAAAAATCTGGA-A--ATTTTTTTCATTATATACATGTAACTTAGAGCTTGGAAATATAACCCATGATTTTCCTTCAGTCCTCACTAGGCTCATCGACTTCTTCATTCCAGTCCATGGGTTCTTATGGGCCTTTCGGCAGGATGCCCACATACAGTCAGTTCAGTCCAAGTTCCTTAGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGt-----tttcttt i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3940096 424 - 30143674 TAAAAC---TCTTAACTT----GGAGAATTTATTGTGGAAAGAAGTATTTGTAAATCACATTGTGTATAGTTGGCACA-------------------------TA----------------------------------------------------------------GAGACAAATGTTGAAATTAGAAGGTTGTCCAAC-----TGATTATTATGCATTAATGTTATGAATATACATTAATATTAAATGCATATTG--------TAATTGC-----------TTTTGTTTCTGGTAGTTATAATTTAATAGTTTTC-CTAAAAA--TTAAAAAATCTGAA----TTTTTTCCCACTATATAC-TGTTGCTTAGAGCTTGGAAAAATAACTCATGATTTTCTTTCAGTCTTCATTAGGTTCATCAGCTTCTTCATTCCAGTCAGTGGGCTCTTATGGACCTTTTGGCAGGATGCCCACGTACAGTCAGTTCAGTCCCAGTTCATTAGTCGGGCAGCAGTTCGGTGCTGTTGGTGTCGGTATGt-----tttcttt i micMur3.chr22 I 38 C 0 s proCoq1.NW_012149263v1 558556 428 + 2501019 TAAAAC---TCTTAACTT----TGGGAATTTATTGTGGAAAGAAGTATTTGTAAATCACATTGTGTATAGTTGGCACA-------------------------TA----------------------------------------------------------------GAGACAAATGTTGAAATTAGAAGGTTGTCCAAC---TGTGATTATTATGCATTAATGTTATTAATAGGCATTAATGTTAAATGCATATTG--------TAATTAC-----------TTTTGTGTCTAGTAATTACGATTTAATAGTTTTC-CTAAAAA--TTAAAAAATCTGAA-T--TTTTTTCCCACTATATACATGTTGCTTAGAGCTTGGAAAAATAACCCATGATTTTCTTTCAGTCTTCATTAGGTTCATCTGCTTCTTCATTCCAGTCAGTGGGTTCTTATGGACCTTTTGGCAGGATGCCCACGTACAGTCAGTTCAGTCCAAGTTCATTAGTCGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGt-----tttcttt i proCoq1.NW_012149263v1 I 3 I 43 s otoGar3.GL873654 5451770 426 + 5549422 TAAAACAAGTCTTAACTT------GGAATTTATTATACCATAAAGTATTTGTAAAGCACATTGTGTATAATTGGAACA-------------------------TA----------------------------------------------------------------GAGACAGATATTAAATTTAGAA-CTTGTTCAGTTGTTGTTACTATTATGCATTGATGTTACTAATATGCATTAATCTTAAATGTATATTA--------TAATTGC-----------TTTTGTTTCTACCAGTT---ATTTAATAGTTTTC-TTTAAAATTTTTAAAAGTCTGAA-T--TTTATTCTGACTATATTC----TGCATAGAGCTTGGAAAAATAACCCGAGATTTTCCTTCAGTCTTCCCTAGGCTCATCTGCTTCTTCATTCCAGTCAGTGGGTTCGTATGGACCTTTTGGCAGGATGCCAACATACAGCCAGTTCAGTCCAAGTTCATTAGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGT-----TTTCTTT i otoGar3.GL873654 I 3 I 1 s mm10.chr7 111069928 495 - 145441459 CAAAAC---TA--AACTCAAAAGAGGAATTTATCATAG-AAAAAGAATTTGTAAATAGCATTAAATGTGATTGGTATAAGTAGATATATTGGGGTCGAGAgt-taagaacactggctgctcttgcagagatccaagttcaagtcccagcaccacatggcagctcccaaGAAGACAAATATTGAAGT---AAGGTTGTT-AAC---------TATT------------------------ATAATATTAGGTATATACTG--------TAAGTCATTATAATTGCCTTTTTAATCTAACTCTTA-AACTCAGCATGTTTT-TAAAAAG--CTTAAAAA---ATA-C--CTAATCTTTGTTATACACATGTAGTTTTGAATTTAGAAGAATAACCTGTGGTATTCTTTCAGTCTTCACTAGGTTCGTCGTCATCTTCATTCCAGTCGGTGGGTTCCTATGGACCTTTTGGCAGGATGCCAGCATACAGTCAGTTCAGTCCAAGTACATTAGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGTGGTGATATTTTT i mm10.chr7 I 3 C 0 s canFam3.chr1 4591614 395 - 122678785 TAAAAC---TCTTAACTC-------TGCTTAACTGTAGAAAAATACATTTATAAGTCACATCAAGTATAACTGGCCCA-------------------------TA----------------------------------------------------------------TATACAAATATTGAAATCAAGAGGTGGTTAAAC-----------CT------------------------TTGATATTAAATGCATGTTGTTAAGTTATAATTGC-----------TTTTATATCTAGTAATTATAA------AGTTTTCTTTCAGAA--AGTAAATATTTGTG-G--GGTTTTTT-ATTATATACATGTTGTATAGAGCCTGGAAAAATAACCCATGGTCTTTCTTCAGTCTTCACTAGGCTCATCTACTTCCTCATTCCAGTCAGTGGGTTCCTATGGACCTTTTGGCAGGATGTCAACATATAGTCAGTTCAGTCCAAGTTCATTAGTCGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGT-----TGTACTT i canFam3.chr1 I 3 I 2 s dasNov3.JH563638 287628 399 + 643850 TAAAAC---T---ACCACAAAGGGGGAGGTTATTATAGAAAAAAGTATTTGTAAATCATATTGAGTATAATTGACATA-----------------------TGTT----------------------------------------------------------------TACAC---TATTGAATGCAGAAGGTTTTTCAAC---------TATC------------------------TTAATATTCAGTGCATATTT--------TAAATCATGGATGCTAC-TTTTGTGTCTGGTTGT---AATTTAATAATTATC-TTAAAAA--TTTGAAAAACATGA-A--CTACTTTCCGTTGTC----TGTGACTTAATGC-TGGAAAAATAACCCATGATTTTCCTTCAGTCTTCATTAGGCTCATCTACTTCTTCATTCCAGTCAGTGGGTTCCTATGGACCTTTTGGCAGAATGTCGACATACAGCCAGTTCACTCCAAGTTCATTGGTTGGGCAGCAGTTTGGTGCTGTTGGTGTTGGTATGT-----GGTCCT- i dasNov3.JH563638 I 3 C 0 a score=204039.000000 s hg38.chr19_GL383574v1_alt 44517 20 + 155864 ttcttttc-tttt----tttgtttt s panTro5.chr19 36113122 20 + 61309027 ttcttttc-tttt----tttgtttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859173 20 + 64411610 ttcttttc-tttt----tttgtttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6276905 20 - 8369475 ttcttttc-tttt----tttgtttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871674 20 - 106955855 ttctttta-tttt----tttgtttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180543 24 + 53671032 ttctttta-tttttttgtttgtttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633472 24 + 59248254 ttctttta-tttttttgtttgtttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501406 24 - 13342542 ttctttta-tttttttgtttgtttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5431986 24 + 7714307 ttctttta-tttttttgtttgtttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239144 24 + 50890351 ttctttta-tttttttgtttgtttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 862787 25 - 2385121 ttcttttattttttttgtttgtttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299072 24 + 4274983 ttctttta-tttttttgtttgtttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28532771 24 + 49145316 ttctttta-cttatttttttgtttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5377308 24 + 8899380 ttctttta-cttatttttttgtttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1588262 24 - 2680843 ttctttta-cttatttttttgtttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 338614 24 - 4471408 ttctttta-cttacttttttgtttt i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3940520 20 - 30143674 tctttttc-cttt----tttatttt i micMur3.chr22 C 0 I 30 s otoGar3.GL873654 5452197 20 + 5549422 TCTTTTTC-CTTT----TTTGTAGG i otoGar3.GL873654 I 1 I 13 s mm10.chr7 111070423 12 - 145441459 TCTTTTTC-TTTT------------ i mm10.chr7 C 0 C 0 s canFam3.chr1 4592011 19 - 122678785 TTCTTTTT-CTTTGTTTTTT----- i canFam3.chr1 I 2 C 0 s dasNov3.JH563638 288027 17 + 643850 --TTTTTA-TTT-----TTTATTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 558984 43 + 2501019 I a score=54570.000000 s hg38.chr19_GL383574v1_alt 44537 5 + 155864 tgtat s panTro5.chr19 36113142 5 + 61309027 tgtat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859193 5 + 64411610 tgtat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6276925 5 - 8369475 tgtat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871694 5 - 106955855 tgtat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180567 5 + 53671032 tgtat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633496 5 + 59248254 tgtat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501430 5 - 13342542 tgtat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432010 5 + 7714307 tgtat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239168 5 + 50890351 tgtat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 862812 5 - 2385121 tgtat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299096 5 + 4274983 tgtat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28532795 5 + 49145316 tgtat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5377332 5 + 8899380 tgtat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1588286 5 - 2680843 tttat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 338638 5 - 4471408 tgtat i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5452230 3 + 5549422 --GAT i otoGar3.GL873654 I 13 I 2 s mm10.chr7 111070435 1 - 145441459 ----T i mm10.chr7 C 0 C 0 s canFam3.chr1 4592030 3 - 122678785 --TAA i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 288044 5 + 643850 TGTAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 558984 43 + 2501019 I e micMur3.chr22 3940540 30 - 30143674 I a score=88860.000000 s hg38.chr19_GL383574v1_alt 44542 6 + 155864 tcttcc s panTro5.chr19 36113147 6 + 61309027 tcttcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859198 6 + 64411610 tcttcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6276930 6 - 8369475 tcttcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871699 6 - 106955855 tcttcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180572 6 + 53671032 tcttcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633501 6 + 59248254 tcttcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501435 6 - 13342542 tcttcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432015 6 + 7714307 tcttcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239173 6 + 50890351 tcttcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 862817 6 - 2385121 tcttcc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299101 6 + 4274983 tcttcc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28532800 6 + 49145316 tcttcc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5377337 6 + 8899380 tcttcc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1588291 6 - 2680843 tcttcc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 338643 6 - 4471408 tcttcc i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 559027 6 + 2501019 TCTCCC i proCoq1.NW_012149263v1 I 43 C 0 s otoGar3.GL873654 5452235 6 + 5549422 TCTCCG i otoGar3.GL873654 I 2 C 0 s mm10.chr7 111070436 6 - 145441459 TCTCAA i mm10.chr7 C 0 C 0 s canFam3.chr1 4592035 6 - 122678785 TTTACC i canFam3.chr1 I 2 C 0 s dasNov3.JH563638 288049 6 + 643850 TCGCCC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3940540 30 - 30143674 I a score=617000.000000 s hg38.chr19_GL383574v1_alt 44548 54 + 155864 tttctttACCACAAAGGTATAG-A-AACTCAA---CACCAACTATTAGAAATGTTGTTT s panTro5.chr19 36113153 54 + 61309027 tttctttACCACAAAGGTATAG-A-AACTCAA---CACAAACTATTAGAAATGTTGTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859204 54 + 64411610 tttctttACCACAAAGGTATAG-A-AACTCAA---CACAAACTATTAGAAATGTTGTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6276936 54 - 8369475 tttctttACCACAAAGGTATAG-A-AACTCAA---CACAAACTATTAGAAATGTTGTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871705 54 - 106955855 tttctttACCCCAAAGGTATAG-A-AACTCAA---CACAAACTATTAGAAACGTTGTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180578 49 + 53671032 tttcttt-----GAGTTTATAG-A-AACTCAA---CACAAACTTTTAGAAATGTTGTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633507 49 + 59248254 tttcttt-----GAGTTTATAG-A-AACTCAA---CACAAACTTTTAGAAATGTTGTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501441 49 - 13342542 tttcttt-----GAGTTTATAG-A-AACTCAA---CACAAACTTTTAGAAATGTTGTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432021 49 + 7714307 tttcttC-----GAGTTTATAG-A-AACTCAA---CACAAACTTTTAGAAATGTTGTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239179 49 + 50890351 tttcttt-----GAGTTTATAG-A-AACTCAA---CACAAACTTTTAGAAATGTTGTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 862823 49 - 2385121 tttcttt-----GAGTTTATAG-A-AACTCAA---CACAAACTTTTAGAAATGTTGTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299107 49 + 4274983 tttcttt-----GAGTTTATAG-A-AACTCAA---CACAAACTTTTAGAAATGTTGTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28532806 51 + 49145316 tttctttGCCACAAAGGTATAG-A-AATTCAA---CACAAACTTTTAGAAA---TGTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5377343 51 + 8899380 tttctttGCCACAAAGGTATAG-A-AACTCAA---CACAAACTTTTAGAAA---TGTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1588297 51 - 2680843 tttctttGCCACAAAGGTATAG-A-AACTCAA---CACAAACTTTTAGAAA---TGTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 338649 51 - 4471408 tttctttGCCACAAAGGTATAG-A-AACTCAA---CACAAACTTTTAGAAA---TGTTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3940570 55 - 30143674 TTTCTTTACCATAAAGATATAGAA-AACTTAC---CACAAACTTCTGGAAATGTTGTTT i micMur3.chr22 I 30 C 0 s proCoq1.NW_012149263v1 559033 55 + 2501019 TTTCTTTACTACAAAGATACAGAA-AACTTAC---CACAAACTTCTGGAAATGTTGTTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5452241 55 + 5549422 TTTCTTTACTACAAAGCTATAGAA-AACTTACTGTCATAAATTTCTGGAAA---TGTTT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111070442 54 - 145441459 TTTCTTAACTACAAAGGTATAG-ATAACTTGT---CA-AAACTTTTGAAAATGTCATTT i mm10.chr7 C 0 I 1963 s canFam3.chr1 4592041 33 - 122678785 ----------------------TG-TCTTTAC---CACAAATTTACAGACATGTTATTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 288055 55 + 643850 TCTTCTTATCACAAAGGTCTAGAA-AACTTAC---CACAATTTTTTGGAAATACTGCTT i dasNov3.JH563638 C 0 C 0 a score=336992.000000 s hg38.chr19_GL383574v1_alt 44602 26 + 155864 GATG-TTCCTTTTGTAACTTTGTTTTA- s panTro5.chr19 36113207 26 + 61309027 GATG-TTCCTTTTGTAACTTTGTTTTA- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859258 26 + 64411610 GATG-TTCCTTTTGTAACTTTGTTTTA- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6276990 26 - 8369475 GATG-TTCCTTTTGTAACTTTGTTTTA- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871759 26 - 106955855 GATG-TTCCTTTTGTAACTTTGTTTTA- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180627 27 + 53671032 GATGTTTCCTTTTGTAACTTTGTTTTA- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633556 27 + 59248254 GATGTTTCCTTTTGTAACTTTGTTTTA- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501490 27 - 13342542 GATGTTTCCTTTTGTAACTTTGTTTTA- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432070 27 + 7714307 GATGTTTCCTTTTGTAACTTTGTTTTA- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239228 27 + 50890351 GATGTTTACTTTTGTAACTTTGTTTTA- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 862872 27 - 2385121 GATGTTTCCTTTTGTAACTTTGTTTTA- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299156 27 + 4274983 GATGTTTCCTTTTGTAACTTTGTTTTA- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28532857 26 + 49145316 GATG-TTCCTTTTGTAACTTTGTTTTA- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5377394 26 + 8899380 GATG-TTCCTTTTGTAACTTTGTTTTA- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1588348 26 - 2680843 GATG-TTCCTTTTGTAACTTTGTTTTA- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 338700 26 - 4471408 GATG-TTCCTTTTGTAACTTTGTTTTA- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3940625 25 - 30143674 GATG-TTCCTTTTGTTAC-TGTTTTTA- i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 559088 26 + 2501019 GATG-TACCTTTTGTTACTTTTTTTTA- i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5452296 19 + 5549422 GATG-----TTTTGTA---TTATTTTA- i otoGar3.GL873654 C 0 I 1859 s canFam3.chr1 4592074 17 - 122678785 GGTG-TTCCTTTTGTAAC---------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 288110 26 + 643850 AATG--TTCTTTTGAAACCTTGTTTTCA i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111070496 1963 - 145441459 I a score=253192.000000 s hg38.chr19_GL383574v1_alt 44628 20 + 155864 TGGTATTCAGAACACATTTT s panTro5.chr19 36113233 20 + 61309027 TGGTATTCAGAACACATTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859284 20 + 64411610 TGGTATTCAGAACACATTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277016 20 - 8369475 TGGTGTTCAGAACACATTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871785 20 - 106955855 TGGTGTTCAGAACACATTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180654 20 + 53671032 TGGCATTCAGAACATATTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633583 20 + 59248254 TGGCATTCAGAACATATTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501517 20 - 13342542 TGGCATTCAGAACATATTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432097 20 + 7714307 TGGCATTCAGAACATATTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239255 20 + 50890351 TGGCATTCAGAACATATTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 862899 20 - 2385121 TGGCATTCAGAACATATTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299183 20 + 4274983 TGGCATTCAGAACACATTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28532883 20 + 49145316 TAGTGTTCAGAACACATATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5377420 20 + 8899380 TAGTGTTCAGAACACATATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1588374 20 - 2680843 CAGTGTTCAGAACACATATT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 338726 20 - 4471408 TAGTGTTCAGAACACATATT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3940650 20 - 30143674 TGGTGTTGAGAACACATTTT i micMur3.chr22 C 0 I 1 s proCoq1.NW_012149263v1 559114 20 + 2501019 TGGTGTTGAGAACACATTTT i proCoq1.NW_012149263v1 C 0 I 2023 s dasNov3.JH563638 288136 20 + 643850 TGATGTTAAGAACACATTTT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592091 0 - 122678785 C a score=209697.000000 s hg38.chr19_GL383574v1_alt 44648 23 + 155864 --GATGATATCTTAAAGCCTTTAT-------------T s panTro5.chr19 36113253 23 + 61309027 --GATGATATCTTAAAGCCTTTAT-------------T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859304 23 + 64411610 --GATGATATCTTAAAGCCTTTAT-------------T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277036 23 - 8369475 --GATGATATCTTAAAGCCTTTAT-------------T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871805 23 - 106955855 --GATGATCTCTTAAAGCCTTTAT-------------T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180674 36 + 53671032 --GATGATATCTTAAAGCCTTTATTTAATATTCTTAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633603 36 + 59248254 --GATGATATCTTAAAGCCTTTATTTAATATTCTTAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501537 36 - 13342542 --GATGATATCTTAAAGCCTTTATTTAATATTCTTAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432117 36 + 7714307 --GATGATATCTTAAAGCCTTTATTTAATATTCTTAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239275 36 + 50890351 --GATGATATCTTAAAGCCTTTATTTAATATTCTTAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 862919 36 - 2385121 --GATGATATCTTAAAGCCTTCATTTAATATTCTTAAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299203 36 + 4274983 --GATGATATCTTAAAGCCTTTATTTAATATTCTTAAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28532903 23 + 49145316 --GATGACATTTTAAAGCCTTTATG------------- i calJac3.chr22 C 0 I 12 s saiBol1.JH378197 5377440 23 + 8899380 --GATGACATTTTAAAGCCTTTATT------------- i saiBol1.JH378197 C 0 I 12 s cebCap1.NW_016107633v1 1588394 23 - 2680843 --GATGACATTTTAAAGCCTTTATT------------- i cebCap1.NW_016107633v1 C 0 I 72 s aotNan1.NW_018505377v1 338746 23 - 4471408 --GATGACATTTTAAAGCCTTTATT------------- i aotNan1.NW_018505377v1 C 0 I 71 s micMur3.chr22 3940671 23 - 30143674 --ATTATTATTTTAAAGCCTTTATT------------- i micMur3.chr22 I 1 I 2529 s canFam3.chr1 4592091 32 - 122678785 ---ATATTATTTTAAAGGCTTTATTTAATGTCCTT--- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 288156 28 + 643850 TAATTATTATTTTGAAGA-TTTATTTAAT--------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I a score=381415.000000 s hg38.chr19_GL383574v1_alt 44671 49 + 155864 GAT-ATTAGTG------GGTTTTTAAAAGTCAGCTTTCACAG-AG-TAA---CA-TTTTTTT s panTro5.chr19 36113276 50 + 61309027 GAT-ATTAGTG------GGTTTTTAAAAGTCAGCTTTCACAG-AG-TAA---CATTTTTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859327 49 + 64411610 GAT-ATTAGTG------GGTTTTTAAAAGTCAGCTTTCACAG-AG-TAA---CA-TTTTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277059 49 - 8369475 GAT-ATTAGTG------GGTTTTTAAAAGTCAGCTTTCACAG-AG-TAA---CA-TTTTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871828 49 - 106955855 GAT-ATTAGTG------GGTTTTTAAAAGTCAGCTTTCACAA-AG-TAA---CA-TTTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180710 49 + 53671032 GAT-ATTAGTG------GGTTTTTAAAAGTCAGTTTTCACGA-GG-TAA---CA-TTTTTTT i rheMac8.chr19 C 0 I 5 s macFas5.chr19 34633639 49 + 59248254 GAT-ATTAGTG------GGTTTTTAAAAGTCAGTTTTCACGA-GG-TAA---CA-TTTTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501573 49 - 13342542 GAT-ATTAGTG------GGTTTTTAAAAGTCAGTTTTCACGA-GG-TAA---CA-TTTTTTT i macNem1.NW_012011689v1 C 0 I 5 s cerAty1.NW_012005268v1 5432153 49 + 7714307 GAT-ATTAGTG------GGTTTTTAAAAGTCAGTTTTCACGA-GG-TAA---CA-TTTTTTT i cerAty1.NW_012005268v1 C 0 I 5 s chlSab2.chr6 29239311 49 + 50890351 GAT-ATTAGTG------GGTTTTTAAAAGTCAGTTTTCACGA-GG-TAA---CA-TTTTTCT i chlSab2.chr6 C 0 I 5 s manLeu1.NW_012102454v1 862955 49 - 2385121 GAT-ATTAGTG------GGTTTTTAAAAGTCAGTTTTCACGA-GG-TAA---CA-TTTTTTT i manLeu1.NW_012102454v1 C 0 I 5 s colAng1.NW_012111697v1 2299239 49 + 4274983 GAT-ATTAGTG------GGTTTTTAAAAGTCAATTTTCACAA-GG-TAA---CA-TTTTTTT i colAng1.NW_012111697v1 C 0 I 5 s calJac3.chr22 28532938 49 + 49145316 GAT-ATTACTG------GGTTTTTGAAAGTCAACTTTTACAA-TA-TAA---CA-TTTTTTT i calJac3.chr22 I 12 C 0 s saiBol1.JH378197 5377475 50 + 8899380 GAT-ATTACTG------GGTTTTTGAAAGTCAACTTTTACAA-TAGTAA---CT-TTTTTTT i saiBol1.JH378197 I 12 C 0 s canFam3.chr1 4592123 51 - 122678785 GATAATTAGTG------GTTCCATGAAGGTCATCTCTCAAAATAG-TCA---CA-GTTTTTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 288184 58 + 643850 GGT-ATTAATGACTACTGGTTCTATAAAGACTAGTACCTCAG-AA-TAATTGCA-TATCCTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e aotNan1.NW_018505377v1 338769 71 - 4471408 I e cebCap1.NW_016107633v1 1588417 72 - 2680843 I a score=1911.000000 s hg38.chr19_GL383574v1_alt 44720 1 + 155864 T s panTro5.chr19 36113326 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859376 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277108 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871877 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 4592174 1 - 122678785 T i canFam3.chr1 C 0 I 421 s dasNov3.JH563638 288242 1 + 643850 T i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29239360 5 + 50890351 I e aotNan1.NW_018505377v1 338769 71 - 4471408 I e cebCap1.NW_016107633v1 1588417 72 - 2680843 I e saiBol1.JH378197 5377525 0 + 8899380 C e calJac3.chr22 28532987 0 + 49145316 C e colAng1.NW_012111697v1 2299288 5 + 4274983 I e manLeu1.NW_012102454v1 863004 5 - 2385121 I e cerAty1.NW_012005268v1 5432202 5 + 7714307 I e macNem1.NW_012011689v1 4501622 5 - 13342542 I e macFas5.chr19 34633688 0 + 59248254 C e rheMac8.chr19 30180759 5 + 53671032 I a score=-13350.000000 s hg38.chr19_GL383574v1_alt 44721 19 + 155864 TACTAGGTA---------AAAAAAAAAT- s panTro5.chr19 36113327 18 + 61309027 TACTAGGT----------AAAAAAAAAT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859377 17 + 64411610 TACTAGGT-----------AAAAAAAAT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277109 18 - 8369475 TACTAGGT----------AAAAAAAAAT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871878 2 - 106955855 T------T--------------------- i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28532987 20 + 49145316 --------ACACATAGTTGTAAAAAAAC- i calJac3.chr22 C 0 I 14 s saiBol1.JH378197 5377525 1 + 8899380 --------T-------------------- i saiBol1.JH378197 C 0 C 0 s dasNov3.JH563638 288243 11 + 643850 ------------------AAACAAGCATA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29239360 5 + 50890351 I e canFam3.chr1 4592175 421 - 122678785 I e aotNan1.NW_018505377v1 338769 71 - 4471408 I e cebCap1.NW_016107633v1 1588417 72 - 2680843 I e colAng1.NW_012111697v1 2299288 5 + 4274983 I e manLeu1.NW_012102454v1 863004 5 - 2385121 I e cerAty1.NW_012005268v1 5432202 5 + 7714307 I e macNem1.NW_012011689v1 4501622 5 - 13342542 I e macFas5.chr19 34633688 0 + 59248254 C e rheMac8.chr19 30180759 5 + 53671032 I a score=1187.000000 s hg38.chr19_GL383574v1_alt 44740 32 + 155864 GGATATAC-TAGGTATATCCAATATCTACCAAA s panTro5.chr19 36113345 32 + 61309027 GGATATAC-TAGGTATATCCAGTATCTACCAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859394 32 + 64411610 GGATATAC-TAGGTATATCCAGTATCTACCAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277127 32 - 8369475 GGATATAC-TAGGTATATCCAATATCTACCAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871880 5 - 106955855 ---TACAC------------------------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34633688 15 + 59248254 ---TACACCTGGGTATAT--------------- i macFas5.chr19 C 0 C 0 s saiBol1.JH378197 5377526 5 + 8899380 --ACACA-------------------------- i saiBol1.JH378197 C 0 C 0 s dasNov3.JH563638 288254 17 + 643850 -------------TATATCC---ATTTACCAAA i dasNov3.JH563638 C 0 I 480 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29239360 5 + 50890351 I e canFam3.chr1 4592175 421 - 122678785 I e aotNan1.NW_018505377v1 338769 71 - 4471408 I e cebCap1.NW_016107633v1 1588417 72 - 2680843 I e calJac3.chr22 28533007 14 + 49145316 I e colAng1.NW_012111697v1 2299288 5 + 4274983 I e manLeu1.NW_012102454v1 863004 5 - 2385121 I e cerAty1.NW_012005268v1 5432202 5 + 7714307 I e macNem1.NW_012011689v1 4501622 5 - 13342542 I e rheMac8.chr19 30180759 5 + 53671032 I a score=10098.000000 s hg38.chr19_GL383574v1_alt 44772 18 + 155864 TCTACCAAATTGGATATA s panTro5.chr19 36113377 18 + 61309027 TCTACCAAATTGGATATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859426 18 + 64411610 TCTACCAAATTGGATATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277159 18 - 8369475 TCTACCAAATTGGATATA i gorGor5.CYUI01015150v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 288271 480 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29239360 5 + 50890351 I e canFam3.chr1 4592175 421 - 122678785 I e aotNan1.NW_018505377v1 338769 71 - 4471408 I e cebCap1.NW_016107633v1 1588417 72 - 2680843 I e saiBol1.JH378197 5377531 0 + 8899380 C e calJac3.chr22 28533007 14 + 49145316 I e colAng1.NW_012111697v1 2299288 5 + 4274983 I e manLeu1.NW_012102454v1 863004 5 - 2385121 I e cerAty1.NW_012005268v1 5432202 5 + 7714307 I e macNem1.NW_012011689v1 4501622 5 - 13342542 I e macFas5.chr19 34633703 0 + 59248254 C e rheMac8.chr19 30180759 5 + 53671032 I e nomLeu3.chr10 63871885 0 - 106955855 C a score=24761.000000 s hg38.chr19_GL383574v1_alt 44790 5 + 155864 CTAGG s panTro5.chr19 36113395 5 + 61309027 CTAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859444 5 + 64411610 CTAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277177 5 - 8369475 CTAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871885 5 - 106955855 CTAGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180764 5 + 53671032 CTGGG i rheMac8.chr19 I 5 C 0 s macNem1.NW_012011689v1 4501627 5 - 13342542 CTGGG i macNem1.NW_012011689v1 I 5 C 0 s cerAty1.NW_012005268v1 5432207 5 + 7714307 CTAGG i cerAty1.NW_012005268v1 I 5 C 0 s chlSab2.chr6 29239365 5 + 50890351 CTAGG i chlSab2.chr6 I 5 C 0 s manLeu1.NW_012102454v1 863009 5 - 2385121 CTGGG i manLeu1.NW_012102454v1 I 5 C 0 s colAng1.NW_012111697v1 2299293 5 + 4274983 CTAGG i colAng1.NW_012111697v1 I 5 C 0 s saiBol1.JH378197 5377531 4 + 8899380 -TAGT i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 288271 480 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I e aotNan1.NW_018505377v1 338769 71 - 4471408 I e cebCap1.NW_016107633v1 1588417 72 - 2680843 I e calJac3.chr22 28533007 14 + 49145316 I e macFas5.chr19 34633703 0 + 59248254 C a score=322797.000000 s hg38.chr19_GL383574v1_alt 44795 36 + 155864 TATATCCAATATCTACCAAATCTTATTGGTAATTGG s panTro5.chr19 36113400 36 + 61309027 TATATCCAATATCTACCAAATCTTATTGGTAATTGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859449 36 + 64411610 TATATCCAATAGCTACCAAATCTTATTGGTAATTGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277182 36 - 8369475 TATATCCAATATCTACCAAATCTTATTGGTAATTGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871890 36 - 106955855 TATATCCAATATCTACCAAATCTTATTGGTAATTGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180769 36 + 53671032 TATATCCAGTATCTACCAAATCTTATTGGTAATTGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633703 31 + 59248254 -----CCAGTATCTACCAAATCTTATTGGTAATTGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501632 36 - 13342542 TATATCCAGTATCTACCAAATCTTATTGGTAATTGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432212 36 + 7714307 TATATCCAGTATCTACCAAATCTTATTGGTAATTGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239370 36 + 50890351 TATATCCAGTATCTACCAAATCTTATTGGTAATTGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863014 36 - 2385121 TATATCCAGTATCTACCAAATCTTATTGGTAATTGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299298 36 + 4274983 TATATCCAGTATCTACCAAATCTTATTGGTAGTTGG i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5377535 36 + 8899380 TATATCTAACATCTACCAAATCTTATTGGTAATTGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1588489 36 - 2680843 TATATCTAACATCTACCAAATCTTATTGATAATTGG i cebCap1.NW_016107633v1 I 72 C 0 s aotNan1.NW_018505377v1 338840 36 - 4471408 TATATCTAACATCTACCAAATCTTATTGGTAATTGG i aotNan1.NW_018505377v1 I 71 I 1 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 288271 480 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I e calJac3.chr22 28533007 14 + 49145316 I a score=43274.000000 s hg38.chr19_GL383574v1_alt 44831 18 + 155864 t---tttg-----ttttg---tttttttt s panTro5.chr19 36113436 21 + 61309027 t---tttg-----ttttgttttttttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859485 21 + 64411610 t---tttg-----ttttgttttttttttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277218 20 - 8369475 t---ttt------tttttttttttttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871926 18 - 106955855 t---tttt-----ttttt---tttttttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180805 29 + 53671032 Atttttttttttttttttttttttttttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633734 26 + 59248254 A---ttttttttttttttttttttttttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501668 26 - 13342542 A---ttttttttttttttttttttttttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432248 20 + 7714307 A---------ttttttttttttttttttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239406 24 + 50890351 A---tttt--gttttgttttgttttgttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863050 17 - 2385121 A---ttt---------ttttttttttttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299334 19 + 4274983 A----------tttttttttttttttttt i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5377571 18 + 8899380 -----------Atttttttttttcttttt i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107633v1 1588525 18 - 2680843 -----------ATTTCTTTTTCTTTTTTT i cebCap1.NW_016107633v1 C 0 I 83 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 288271 480 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I e aotNan1.NW_018505377v1 338876 1 - 4471408 I e calJac3.chr22 28533007 14 + 49145316 I a score=112995.000000 s hg38.chr19_GL383574v1_alt 44849 18 + 155864 aaagaca--aagtctcactc s panTro5.chr19 36113457 18 + 61309027 aaagaca--aagtctcactc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859506 18 + 64411610 aaagaca--aagtctcactc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277238 20 - 8369475 aaagacagcaagtctcactc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871944 18 - 106955855 aaagaca--aagtctcgctc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30180834 18 + 53671032 taagaca--aagtctcactc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633760 18 + 59248254 taagaca--aagtctcactc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501694 18 - 13342542 taagaca--aagtctcactc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432268 18 + 7714307 taagaca--aagtctcactc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239430 18 + 50890351 taagaca--gagtctcactc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863067 18 - 2385121 taagaca--aagtctcactc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299353 18 + 4274983 taagaca--aagtctcactc i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5377590 18 + 8899380 tgagaca--gagtctcactc i saiBol1.JH378197 I 1 I 2 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 288271 480 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I e aotNan1.NW_018505377v1 338876 1 - 4471408 I e cebCap1.NW_016107633v1 1588543 83 - 2680843 I e calJac3.chr22 28533007 14 + 49145316 I a score=187814.000000 s hg38.chr19_GL383574v1_alt 44867 31 + 155864 tgtcactcaggctggagtccagtggcactat s panTro5.chr19 36113475 31 + 61309027 tgtcactcaggctggagtccagtggcactat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859524 31 + 64411610 tgtcactcaggctggagtccagtggcactat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277258 31 - 8369475 tgtcactcaggctggagtccagtggcactat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63871962 31 - 106955855 tatcactcaggctggagtccagtggcactat i nomLeu3.chr10 C 0 M 100 s rheMac8.chr19 30180852 31 + 53671032 tgtcactcaggctgaagtccagtggcactat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633778 31 + 59248254 tgtcactcaggctgaagtccagtggcactat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501712 31 - 13342542 tgtcactcaggctgaagtccagtggcactat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432286 31 + 7714307 tgtcactcaggctgaagtccagtggcactat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239448 31 + 50890351 tgtcactcaggctgaagtccagtggcactat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863085 31 - 2385121 tgtcactcaggcggaagtccagtggcactat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299371 31 + 4274983 tgtcactcaggctgaagtccagtggcactat i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 288271 480 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I e aotNan1.NW_018505377v1 338876 1 - 4471408 I e cebCap1.NW_016107633v1 1588543 83 - 2680843 I e saiBol1.JH378197 5377608 2 + 8899380 I e calJac3.chr22 28533007 14 + 49145316 I a score=288224.000000 s hg38.chr19_GL383574v1_alt 44898 62 + 155864 cttggctcactacaacttccacctcgtgggtttaagcaattctcgtgcctcagcctcccaga s panTro5.chr19 36113506 62 + 61309027 cttggctcactacaacttccacctcgtgggtttaagcaattctcgtgcctcagcctcccaga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859555 62 + 64411610 cttggctcactacaacttccacctcgtgggtttaagcaattctcgtgcctcagcctcccaga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277289 62 - 8369475 cttggctcactacaacttccgcctcgtgggtttaagcaattctcgtgcctcagcctcccaga i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30180883 62 + 53671032 cttggctcactataacctccgcctcctgggtttaagcaattctcgtgccttagcctcacaag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633809 62 + 59248254 cttggctcactataacctccgcctcctgggtttaagcaattctcgtgccttagcctcacaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501743 62 - 13342542 cttggctcactataacctccgcctcctgggtttaagcaattctcgtgccttagcctcacaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432317 62 + 7714307 cttggctcactataacctccgcctcctgggtttaagcaattctcgtgccttagcctcacaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239479 62 + 50890351 cttggctcactataacctccgcgtcctgggtttacgcaattctcgtgccttagcctcacaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863116 62 - 2385121 cttggctcactataacctccgcctcctgggtttaagcaattctcgtgccttagcctcacaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299402 62 + 4274983 cttggctcactacaacctccgtctcctgggtttaagcaattcccgtgcctcagcctcacaaa i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 288271 480 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I e aotNan1.NW_018505377v1 338876 1 - 4471408 I e cebCap1.NW_016107633v1 1588543 83 - 2680843 I e saiBol1.JH378197 5377608 2 + 8899380 I e calJac3.chr22 28533007 14 + 49145316 I e nomLeu3.chr10 63871993 100 - 106955855 M a score=695370.000000 s hg38.chr19_GL383574v1_alt 44960 171 + 155864 tagctgagattac-ga-tatgcatcaccacacccagctaatttttgtattttcagtagaggtggagtttcactgtgttggccaggcaggtcttgaactcctgacctcaggtgatccacctgcttcggcctcccaaagtgctaggattacaggtgtgagccactgcgcctggcc s panTro5.chr19 36113568 171 + 61309027 tagctgggattac-ga-tatgcatcaccacacccagctaatttttgtattttcagtagaggtggagtttcactgtgttggccaggcaggtcttgaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgctaggatcacaggtgtgagccactgcgcctggcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859617 171 + 64411610 tagctgggattac-ga-tatgcatcaccacacccagctaatttttgtattttcagtagaggtgaagtttcgctgtgttggccaggcaggtcttgaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgctaggatcacaggtgtgagccactgcgcctggcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277351 171 - 8369475 tagctgggattac-ga-tatgcatcaccacacccagctaatttttgtattttcagtagaggtggagtttcactgtgttggccaggcgggtcttgaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgctaggattacaggtgtgagccactgcgcctggcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872093 172 - 106955855 tagctgggattacaga-tatgcatcaccacacccagctaatttttgtattttcagtagaggtggagtttcaccatgttgaacaggctggtcttgaactcctgacctcaggtgatccacctgcctcagcctcccaaagtgctaggattacgggtgtgagccactgcgcctggcc i nomLeu3.chr10 M 100 C 0 s rheMac8.chr19 30180945 127 + 53671032 tagctgggattac-ag-tatgtatcaccacacctagctaatttttgtattttcagtagaggtggggtttcaccatgttgaccaggctggtcttgaactcctgacctcag--------------------------------------------gtgagcccctgtgcctggcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633871 127 + 59248254 tagctgggattac-ag-tatgtatcaccacacctagctaatttttgtatttttagtagaggtggggtttcaccatgttgaccaggctggtcttgaactcctgacctcag--------------------------------------------gtgagcccctgtgcctggcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501805 127 - 13342542 tagctgggattac-ag-tatgtatcaccacacctagctaatttttgtattttcagtagaggtggggtttcaccatgttgaccaggctggtcttgaactcctgacctcag--------------------------------------------gtgagcccctgtgcctggcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432379 128 + 7714307 tagctgggattac-agatgtgtatcaccacacctagctaatttttgtattttcagtagaggtggggtttcaccatgttgaccaggctggtcttgaactcctgacctcag--------------------------------------------gtgagcccctgtgcctggcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239541 128 + 50890351 tagctggaattac-agatatgtatcaccacacatagctaatttttgtattttcagtagaggtggggtttcaccatgttgaccaggctggtcttgaactcctgacctcag--------------------------------------------gtgagcccctgtgcctggcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863178 127 - 2385121 tagctgggattac-ag-tatgtatcaccacacctagctaatttttgtattttcagtagaggtggggtttcaccatgttgaccaggctggtcttgaactcctgacctcag--------------------------------------------gtgagcccctgtgcctggcc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299464 128 + 4274983 tagctgggattac-agatatgtatcaccacacctagctaatttttgtattttcagtataggtggggtttcaccgtgttgaccaggctggtcttgaactcctgacctcag--------------------------------------------gtgagcccctgtgcctggcc i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 288271 480 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I e aotNan1.NW_018505377v1 338876 1 - 4471408 I e cebCap1.NW_016107633v1 1588543 83 - 2680843 I e saiBol1.JH378197 5377608 2 + 8899380 I e calJac3.chr22 28533007 14 + 49145316 I a score=105452.000000 s hg38.chr19_GL383574v1_alt 45131 37 + 155864 TGGATTTTAATTAATAAA--TTTTTCTTTTT---------AATTTCTt s panTro5.chr19 36113739 37 + 61309027 TGGATTTTAATTAATAAA--TTTTTCTTCTT---------AAtttctt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859788 34 + 64411610 TGGA-TTTAATT-ATAAA---ttttcttctt---------aatttctt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277522 37 - 8369475 TGGATTTTAATTAATAAA--TTTTTCttttt---------aatttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872265 37 - 106955855 TGGATTTTAATTAATAAA--TTTTTCTTTTT---------AAtttctt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181072 29 + 53671032 tGGATTTTAATTAATCAA--ttttttttttc----------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34633998 29 + 59248254 tGGATTTTAATTAATCAA--ttttttttttc----------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501932 31 - 13342542 tGGATTTTAATTAATCAAttttttttttttt----------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432507 29 + 7714307 tGGATTTTAATTAATCAA--ttttttttttc----------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239669 31 + 50890351 tGGATTTTAATTAATCAAttttttttttttt----------------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863305 29 - 2385121 tGGATTTTAATTAATCAA--ttttttttttt----------------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299592 21 + 4274983 tGGATTTTAATTAATCAA--ttt------------------------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28533021 46 + 49145316 TGGAtttttttttctttt--ttttttttttttGGAAACAGAGTCTCTA i calJac3.chr22 I 14 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 288271 480 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I e aotNan1.NW_018505377v1 338876 1 - 4471408 I e cebCap1.NW_016107633v1 1588543 83 - 2680843 I e saiBol1.JH378197 5377608 2 + 8899380 I a score=-4044.000000 s hg38.chr19_GL383574v1_alt 45168 10 + 155864 -------tttctttttt s panTro5.chr19 36113776 4 + 61309027 -------tttc------ i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859822 10 + 64411610 -------tttctttctt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277559 4 - 8369475 -------ttct------ i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872302 4 - 106955855 -------tttc------ i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28533067 10 + 49145316 TCttttgttt------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5377610 10 + 8899380 tcttttgttt------- i saiBol1.JH378197 I 2 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 288271 480 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29239700 0 + 50890351 C e canFam3.chr1 4592175 421 - 122678785 I e aotNan1.NW_018505377v1 338876 1 - 4471408 I e cebCap1.NW_016107633v1 1588543 83 - 2680843 I e colAng1.NW_012111697v1 2299613 0 + 4274983 C e manLeu1.NW_012102454v1 863334 0 - 2385121 C e cerAty1.NW_012005268v1 5432536 0 + 7714307 C e macNem1.NW_012011689v1 4501963 0 - 13342542 C e macFas5.chr19 34634027 0 + 59248254 C e rheMac8.chr19 30181101 0 + 53671032 C a score=4312.000000 s hg38.chr19_GL383574v1_alt 45178 12 + 155864 ------tttttttttttt s panTro5.chr19 36113780 12 + 61309027 ------tttttttttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859832 12 + 64411610 ------tttttttttttt i panPan2.chr19 C 0 I 33 s gorGor5.CYUI01015150v1 6277563 7 - 8369475 ------ttttttt----- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872306 12 - 106955855 ------tttttttttgtt i nomLeu3.chr10 C 0 I 4 s rheMac8.chr19 30181101 6 + 53671032 ------tttttt------ i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34634027 6 + 59248254 ------tttttt------ i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501963 6 - 13342542 ------tttttt------ i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432536 5 + 7714307 -------ttttt------ i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239700 6 + 50890351 ------tttttt------ i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863334 6 - 2385121 ------attttt------ i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299613 5 + 4274983 -------ttttt------ i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28533077 12 + 49145316 tattttatcttt------ i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5377620 12 + 8899380 tattttattttt------ i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 338877 12 - 4471408 tttttttttttc------ i aotNan1.NW_018505377v1 I 1 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 288271 480 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I e cebCap1.NW_016107633v1 1588543 83 - 2680843 I a score=281753.000000 s hg38.chr19_GL383574v1_alt 45190 43 + 155864 tttttctgaggcagagtcttgctctgttgcccaggctagagtg s panTro5.chr19 36113792 43 + 61309027 tttttctgaggcagagtcttgctctgttgcccaggctagagtg i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277570 43 - 8369475 tttttctgaggcagagtcttgctctgttgcccaggctagagtg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872322 38 - 106955855 -----ctgaggcagagtctcgctctgttgcccaggctagagta i nomLeu3.chr10 I 4 C 0 s rheMac8.chr19 30181107 43 + 53671032 tttttttgaggcagagtctcactctgttgcccaggctggagta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34634033 43 + 59248254 tttttttgaggcagagtctcactctgttgcccaggctggagta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4501969 43 - 13342542 tttttttgaggcagagtctcactctgttgcccaggctggagta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432541 43 + 7714307 tttttttgaggcagagtctcactttgttgcccaggctggagta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239706 43 + 50890351 tttttttgaggcagaatctcactctgttgcccaggctggagta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863340 43 - 2385121 tttttttgaggcagagtctcactctgttgcccaggctggagta i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299618 43 + 4274983 tttttttgaggcagagtctcactctgttgcccaggctggagta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28533089 43 + 49145316 attttttgagagagagtctcgctatatcacccagcctggagtg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5377632 41 + 8899380 atttttt--gagacagtctcgctatgtcacccagcctggagtg i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 338889 43 - 4471408 tttttttgagacagagtcacgctatatcacccagcctggagtg i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 288271 480 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I e cebCap1.NW_016107633v1 1588543 83 - 2680843 I e panPan2.chr19 39859844 33 + 64411610 I a score=214786.000000 s hg38.chr19_GL383574v1_alt 45233 25 + 155864 cagtggcatgatctccgctc-actgc s panTro5.chr19 36113835 25 + 61309027 cagtggcatgatctccgctc-actgc i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277613 25 - 8369475 cagtggcatgatctccgctc-actgc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872360 25 - 106955855 cagtggcatgatctccactc-actgc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181150 25 + 53671032 cagtggcatgatctccacta-actgc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34634076 25 + 59248254 cagtggcatgatctccacta-actgc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4502012 25 - 13342542 cagtggcatgatctccacta-actgc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432584 25 + 7714307 tagtggcatgatctccactc-tctgc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239749 25 + 50890351 cagtggcatgatctccactc-actgc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863383 25 - 2385121 cagtggcatgatctccacta-actgc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299661 25 + 4274983 cagtggcatgatctccactc-actgc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28533132 25 + 49145316 cagtggcctgatctccactc-actgc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5377673 25 + 8899380 cagtggcctgatctctactc-actgc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1588626 25 - 2680843 cagtggcctgatctccactc-actgt i cebCap1.NW_016107633v1 I 83 C 0 s aotNan1.NW_018505377v1 338932 26 - 4471408 cagtggcctgatctccactcaactgc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 288271 480 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I e panPan2.chr19 39859844 33 + 64411610 I a score=422060.000000 s hg38.chr19_GL383574v1_alt 45258 46 + 155864 aacctccacctcccaggcttaagcagtgctcctgcctc------agcctcct s panTro5.chr19 36113860 46 + 61309027 aacctccacctcccaggcttaagccgtgctcctgcctc------agcctcct i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277638 46 - 8369475 aacctccacctcccaggcttaagcagtgctcctgcctc------agcctcct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872385 46 - 106955855 aacctccacctcccaggtttaagcagtgctcctgcctc------agcctcct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181175 46 + 53671032 aacctccatctcccaggtttaagcagtgctcctgcctc------agcctcct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34634101 46 + 59248254 aacctccatctcccaggtttaagcagtgctcctgcctc------agcctcct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4502037 46 - 13342542 aacctccatctcccaggtttaagcagtgctcctgcctc------agcctcct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432609 46 + 7714307 aacctccatctcccaggtttaagcagtgctcctgcctc------agcctcct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239774 46 + 50890351 aacctctatctcccaggtttaagcagtggtcctgcctc------agcctcct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863408 46 - 2385121 aacctccatctcccaggtttaagcagtgctcctgcctc------agcctcct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299686 46 + 4274983 aacctccatctcccaggtttaagcagtgctcctgcctc------agcctcct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28533157 46 + 49145316 aacctccacctcccgggttcaagcaattctcctgcctc------agcctcct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5377698 46 + 8899380 aacctccacctctcaggttcaagcaattctcctgcctc------agcctcct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1588651 46 - 2680843 aacctccacctcctgggttcaagcaattctcctgcctc------agcctcct i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 338958 46 - 4471408 aacctccacctcctgggttctagcagttctcctgcctc------agcctcct i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 288751 50 + 643850 AAGTTTCAAGGCCCAGGATTTAGTAGTG--TCTGCCTTACATTAAGACTTTT i dasNov3.JH563638 I 480 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I e panPan2.chr19 39859844 33 + 64411610 I a score=47904.000000 s hg38.chr19_GL383574v1_alt 45304 4 + 155864 gagt s panTro5.chr19 36113906 4 + 61309027 gagt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859877 4 + 64411610 gagt i panPan2.chr19 I 33 C 0 s gorGor5.CYUI01015150v1 6277684 4 - 8369475 gagt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872431 4 - 106955855 gagt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181221 4 + 53671032 gagt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34634147 4 + 59248254 gagt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4502083 4 - 13342542 gagt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5432655 4 + 7714307 gagt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239820 4 + 50890351 gagt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863454 4 - 2385121 gagt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299732 4 + 4274983 gagt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28533203 4 + 49145316 gagt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5377744 4 + 8899380 gagc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1588697 4 - 2680843 gagt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 339004 4 - 4471408 gagt i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 288801 4 + 643850 AAGT i dasNov3.JH563638 C 0 I 97 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I a score=1737470.000000 s hg38.chr19_GL383574v1_alt 45308 184 + 155864 agctgggattacaggtgtgcgccaccactcccagccaatttttttgtatttttagtagagatggggtttcaccatgttggccaagctggtctcgaactcctgacctcaagtgatccacccacctcagcctcccgaagtgctgggattacaggcgtgagccaccaagcccggccTAAAAC-----ATTTA s panTro5.chr19 36113910 184 + 61309027 agctgggattacaggtgtgcgccaccactcccggccaatttttttgtatttttagtagagatggggtttcaccatgttggccaagctggtctggaactcctgacctcaagtgatccacccacctcagcctcccgaagtgctgggattacaggcgtgagccaccaagcccggccTAAAAC-----ATTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39859881 184 + 64411610 agctgggattacaggtgtgcgccaccactcccggccaatttttttgtatttttaatagagatggggtttcaccatgttggccaagctggtctggaactcctgacctcaagtgatccacccacctcagcctcccgaagtgctgggattacaggcgtgagccaccaagcccggccTAAAAC-----ATTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277688 181 - 8369475 agctgggattacaggtgtgcgccaccactcctggccaatttttttgtatttttagtagagat-gggtttcaccatgttggccaagctggtctcgaactcctgacctcaagtgatcca-ccacctcagcctcccgaagtgctgggattacaggcgtgagccaccaagccc-gCCTAAAAC-----ATTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872435 170 - 106955855 agctgggattacaggtgtgcgccaccactcctggccaatttttttgtatttttagtagagatggggtttcaccatgttggccaagctggtctcgaactcctgacctcaagtgat----ccacctcagcctcccaaagtgctgggattacaggcatgagccaccaagcccagccT--------------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181225 179 + 53671032 agctgggattaccggtgtgcaccaccactcccggctaatttttttgtatttttagtagagatggggtttcaccatgttggccaagctggtctcgaactcctgacctcaagtgatccacccacttcaacctcccaaagtgctgggattacaggcatgtgccaccaagcctggccTAAAAC---------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34634151 180 + 59248254 agctgggattaccggtgtgcaccaccactcccggctaatttttttgtatttttagtagagatggggtttcaccatgttggccaagctggtctcgaactcctgacctcaagtgatccacccacttcagcctcccaaagtgctgggattacaggcatgtgccaccaagcctggccTAAAACA--------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4502087 184 - 13342542 agctgggattaccggtgtgcaccaccactcccggctaatttttttgtatttttagtagaaatggggtttcaccatgttggccaagctggtctcgaactcctgacctcaagtgatccacccacttcagcctcccaaagtgctgggattacaggcatgtgccaccaagcctggccTAAAACGTTTA----- i macNem1.NW_012011689v1 C 0 I 315 s cerAty1.NW_012005268v1 5432659 179 + 7714307 agctgggattaccggtgtgcaccaccactcccggctaatttttttgtatttttagtagagatggggtttcaccatgttggccaagctggtctcgaactcctgacctcaagtgatccacccacttcagcctcccaaagtgctgggattacaggcatgtgccaccaagcctggccTAAAAC---------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29239824 179 + 50890351 agctgggattaccggtgtgcaccaccactcccggctaatttttttgtatttttagtagagatggggtttcaccatgttggccaagctggtctcgaactcctgaccttaagtgatccacccacttcagcctcccaaagtgctgggattacaggcatgtgccaccaagcctggccTAAAAT---------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863458 179 - 2385121 agctggggttaccggtgtgcaccaccactcccggctaatttttttgtatttttagtagagatggggtttcaccatgttggccaagctggtctcgaactcctgacctcaagtgatccacccacttcagcctcccaaagtgctgggattacaggcatgtgccaccaagcctggccTAAAAC---------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299736 179 + 4274983 agatggaattaccggtgtgcactgccactcccggctaacttttttgtatttttagtagagatggggtttcaccatgttggccaagctggtctcgaactcctgacctcaagtgatccacccacttcagtctcacaaagtgctgggattacaggcatgtgccaccaagcctggccTAAAAC---------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28533207 179 + 49145316 agctgagattacacatatgcaccaccacacccagctaatttttttgtatttttagtagagatggcatttcaccatgttggccaagctggtctcaaactcctgacctcaagtgatccacccacctcagccttccaaaatgctgacgttacaggcgtgagctaccgtgcccagccTAATAC---------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5377748 179 + 8899380 agctgggattacaggtgggctccaccacacccagctactttttttgtatttttagtagagatggcatttcaccgtgttggccaagctggtctcgaactcctgacctcaagtgatccactcacctcagccttccaaaatgctgagattacaggcatgagctaccgtgcccagccTAAAAC---------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1588701 179 - 2680843 agctaggattacaggtgtgcgccaccacacccagctaatttttttgtatttttagtagagatggcatttcaccatgttggccaagctggtctcgaactcctgacctcaagtgatccacctacctcagccttccaaaatgctgagattacaggcgtgagctaccgtgcccagccTAAAAC---------- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 339008 179 - 4471408 agctgggattacaggtgtgcgccaccacacccagctaatttttttgtatttttagtagagatggcatttcaccatgttggccaagctggtctcgaactcctgacctcaagtgatccacccacctcagccttccaaaatgctgagattacaggcgtgagctaccgtgcccaaccTAAAAC---------- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 288805 97 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I a score=12260.000000 s hg38.chr19_GL383574v1_alt 45492 8 + 155864 AAAATGTT s panTro5.chr19 36114094 8 + 61309027 AAAATGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39860065 8 + 64411610 AAAATGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277869 8 - 8369475 AAAATGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872605 8 - 106955855 AAAATGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181404 3 + 53671032 -----GTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34634331 2 + 59248254 ------TT i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5432838 3 + 7714307 -----GTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29240003 3 + 50890351 -----GTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863637 3 - 2385121 -----GTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299915 3 + 4274983 -----GTT i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 288805 97 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I e aotNan1.NW_018505377v1 339187 0 - 4471408 C e cebCap1.NW_016107633v1 1588880 0 - 2680843 C e saiBol1.JH378197 5377927 0 + 8899380 C e calJac3.chr22 28533386 0 + 49145316 C e macNem1.NW_012011689v1 4502271 315 - 13342542 I a score=1515842.000000 s hg38.chr19_GL383574v1_alt 45500 175 + 155864 TATTTTAAACATAC--ATAAGACATGCACACATAAAGATACGCATAGCATGATTGAGGGCTTGGTGTTTTGTTTCTGTAACACTGGATTTGAAACGAAACTATAATGAGAATGTAT-AGCAGGGCTGGGCGAATGACAGGCTTGCTTATGACTGGAG--GGTCAAGG--GCTATTGAGTGCA s panTro5.chr19 36114102 175 + 61309027 TATTTTAAACATAC--ATAAGACATGCACACATAAAGATACGCATAGCATGATTGAGGGCTTGGTGTTTTGTTTCTGTAACACTGGATTTGAAACGAAACTATAATGAGAATGTAT-AGCAGGGCTGGGCGAATGACAGGCTTGCTTATGACTGGAG--GGTCAAGG--GCTATTGAGTGCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39860073 175 + 64411610 TATTTTAAACATAC--ATAAGACATGCACACATAAAGATACGCATAGCATGATTGAGGGCTTGGTGTTTTGTTTCTGTAACACTGGATTTGAAACGAAACTATAATGAGAATGTAT-AGCAGGGCTGGGCGAATGACAGGCTTGCTTATGACTGGAG--GGTCAAGG--GCTATTGAGTGCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6277877 174 - 8369475 TATTTTAAACATAC--ATAAGACATGCACACATAAAGATACGCATAGCATG-TTGAGGGCTTGGTGTTTTGTTTCTGTAACACTGGATTTGAAACGAAACTGTAATGAGAATGTAT-AGCACGGCTGGGCGAATGACAGGCTTGCTTATGACTGGAG--GGTCAAGG--GCTATTGAGTGCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872613 173 - 106955855 TATTTTAAAC--AC--ATAAGACATGCACACATAAAGATACACATAGCATGATTGAGGGCTTGGTGTTTTGTTTCTGTAACACTGGATTTGAAACAAAACTGTAATGAGAATGTAT-AGCAGGGCTGGGTGAATGACAGGCTTGCTTATGGCTGGAG--GGTCAAGG--GCTATTGAGTGCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181407 173 + 53671032 TATTTTAAACATAC--ATAAGACATGCACACATAAAGATACACATAGCATGATTGAGGGCTTGGTGTTTTGTTTCTGTAACACTGGGTTTGAAACAAAAC--TAATGAGAATGTAT-AGCAGGGCTGAGCGAATGACAGGCTTACTTACGGCTGGAG--GGTCAAGG--GCTATTGAGTGCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34634333 173 + 59248254 TATTTTAAACATAC--ATAAGACATGCACACATAAAGATACGCATAGCATGATTGAGGGCTTGGTGTTTTGTTTCTGTAACACTGGGTTTGAAACAAAAC--TAATGAGAATGTAT-AGCAGGGCTGAGCGAATGACAGGCTTACTTACGGCTGGAG--GGTCAAGG--GCTATTGAGTGCA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5432841 173 + 7714307 TATTTTAAACACAC--ATAAGACATGCACACATAAAGATACGCATAGCATGATTGAGGGCTTGGTGTTTTGTTTCTGTAACACTGGGTTTGAAACAAAAT--TAATGAGAATGTAT-AGCAGGGCTGAGCGAATGACAGGCTTACTTATGACTGGAG--GGTCAAGG--GCTATTGAGTGCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29240006 173 + 50890351 TATTTTAAACATAC--ATAAGACATGCACACATAAAGATACGCATAGCATGATTGAGGGCTTGGTGTTTTGTTTCTGTAACACTGGGTTTGAAACAAAAC--TAATGAGAATGTAT-AGCAGGGCTGAGCGAATGACAGGCTTACTTTTGGCTGGAG--GGTCAAGG--GCTATTGAGTGCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863640 173 - 2385121 TATTTTAAACATAC--ATAAGACATGCACACATAAAGATACGCATAGCATGATTGAGGGCTTGGTGTTTTGTTTCTGTAACACTGGGTTTGAAACAAAAC--TAATGAGAATGTAT-AGCAGGGCTGAGCGAATGACAGGCTTACTTACGGCTGGAG--GGTCAAGG--GCTATTGAGTGCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2299918 173 + 4274983 TATTTTAAACATAC--ATAAGACATGCACACATAAAGATACGCATAGCGTGATTGAGGGCTTGGTGTTTTGTTTCTGTAACACTGGGTTTGAAACAAAAC--TAATGAGAATGTAT-AGCAGGGCTGGGAGAATGACAGGCTTACTTATGGCTGGAG--GGTCAAGG--GCTATTGAGTGCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28533386 173 + 49145316 -ATTTTAAATTTGT--ATAAGACATGCACACATAAAGATACATGTAGCATGATTGAGGGCTTG--GTTTTGTCTCTCTAACAGTGGTTTTGAAACAAAGCTATAACAAGAATGTAC-AGCAGGGCTGGGCGAATGACAGTCTTACTTATGGCTGGAGA-GGTCAAGG--GCTGTTGAGTGCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5377927 174 + 8899380 -ATTTTAAACATAC--ATAAGACATGCACACATAAAGATACACATAGCATGATTGAGGGCTTG--GTTTTGTTTCTCTAACACTGGTTTTGAAACAAAGCTATAACAAGAATGTAC-AGCAGGGCTGGGCGAATGACAGTCTTATTTATAGCTGGAGAGGGTCAAGG--GCTATTGAGTGCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1588880 172 - 2680843 -ATTTTAAACATAC--AAAAGACATGCACACATAAAGATACACATAGCATGATTGAGGGCTTG--GTTTTGTTTCTCTAACACTGGTTTTGAAAC--AGCTATAACAAGAATGCAC-AGCAGGGCTGGGCAAATGACAGTCTTACTTATGGCTGGAGAGGGTCAAGG--GCTATTGAGTGCA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 339187 174 - 4471408 -ATTTTAAACATAG--ATAAGACATGCATACATAAAGATACACATAGCATGATTGAGGGCTTG--GTTTTGTTTCTCTAACACTGGTTTTGAAACAAAGCTATAACAAGAATGTAC-AGCAGGGCTGGGCGAGTAACAGTCTTACTTATGGCTGGAGAGGGTCAAGG--GCTATTGAGTGCA i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 288902 138 + 643850 CATTTAACACCCACCTATAAGAGATCCTCACA----------CACAGCATATCTGAGGGCTTAGT--------------------------------ACCTATAGTGAAAATGTATAAGAAGAGCTGGGCTAATGACAGTCCTAATAATGATTGTAG--GATAAAGGTATCCATTGTGTTCA i dasNov3.JH563638 I 97 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592175 421 - 122678785 I e macNem1.NW_012011689v1 4502271 315 - 13342542 I a score=559912.000000 s hg38.chr19_GL383574v1_alt 45675 62 + 155864 AAAGCTGGATGTAATCAGATTAGCTCAG---TGT-----TTTGTTTTTATAGCTATGCATTTTAGCGTTT s panTro5.chr19 36114277 65 + 61309027 AAAGCTGGATGTAATCAGATTAGCTCAGTGTTGT-----TTTGTTTTTATAGCTGTGCATTTTAGCGTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39860248 65 + 64411610 AAAGCTGGATGTAATCAGATTAGCTCAGTGTTGT-----TTTGTTTTTATAGCTGTGCATTTTAGCGTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6278051 64 - 8369475 AAAGCTGGATGTAATCAGATTAGCTCAGTGTTGT-----TTTG-TTTTATAGCTGTGCATTTTAGCGTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872786 65 - 106955855 AAAGCTGGATGTAATCAGATTGGCTCAGTGTTTT-----TTTGTTTTTATAGCTGTGCATTTTAGTGTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181580 65 + 53671032 AAAGCTGGATGTAATCAGATTAGCTCAGTGTTGT-----TTTGTTTTTATAGCTGTGCATTTTAGTGTTT i rheMac8.chr19 C 0 I 19 s macFas5.chr19 34634506 65 + 59248254 AAAGCTGGATGTAATCAGATTAGCTCAGTGTTGT-----TTTGTTTTTATAGCTGTGCATTTTAGTGTTT i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5433014 65 + 7714307 AAAGCTGGATGTAATCAGATTAGCTCAGTGTTGT-----TTTGTTTTTATAGTTGTGCATTTTAGTGTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29240179 65 + 50890351 AAAGCTGGATGTAATCAGATTAGCTCAGTGTTGT-----TTTGTTTTTATAGCTCTGCATTTTAGTGTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863813 65 - 2385121 AAAGCTGGATGTAATCAGATTAGCTCAGTGTTGT-----TTTGTTTTTATAGCTGTGCATTTTAGTGTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2300091 65 + 4274983 AAAGCTGGATGTAATCAGATTAGCTCAGTGTTGT-----TTTGTTTTTATAGCTGTGCATTTTAGTGTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28533559 64 + 49145316 AAATCTGGATATAATCAGATTAGCTCAGTATTGT------TTTTTTTAATAGCTGTACATTTTAGCATTT i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5378101 70 + 8899380 AAATCTGGATATAATCAGACTAGTTCAGTGTTTTGTTTTGTTTTTTTTATAGCTGTACATTTTAGCATTT i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107633v1 1589052 62 - 2680843 AAATCTGGATATAATCAGATTAGCTCAGTGTTGT--------TTTTTTATAGCTGTACATTTTAGCATTT i cebCap1.NW_016107633v1 C 0 I 1 s aotNan1.NW_018505377v1 339361 65 - 4471408 AAATCTGGATATAACCAGATTAGCTCAGTGTTTT-----TTTTTTGTTATAGCTGTACATTTTAGCATTT i aotNan1.NW_018505377v1 C 0 I 1 s canFam3.chr1 4592596 62 - 122678785 AAAGCTAGATATAATCAGATCAGCTCCATGTTCT--------GTTTTTAGAGCTGTGCATTTTAGCTCTT i canFam3.chr1 I 421 I 2 s dasNov3.JH563638 289040 27 + 643850 AAAACTAGATACA-----------------TTAT-----ATTG-------------ACATTC-------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e macNem1.NW_012011689v1 4502271 315 - 13342542 I a score=-4824.000000 s hg38.chr19_GL383574v1_alt 45737 2 + 155864 AA s panTro5.chr19 36114342 2 + 61309027 AA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39860313 2 + 64411610 AA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6278115 2 - 8369475 AA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872851 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34634571 2 + 59248254 AA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5433079 2 + 7714307 AA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29240244 2 + 50890351 AA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863878 2 - 2385121 AA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2300156 2 + 4274983 AA i colAng1.NW_012111697v1 C 0 I 34 s calJac3.chr22 28533624 1 + 49145316 A- i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5378172 1 + 8899380 A- i saiBol1.JH378197 I 1 C 0 s cebCap1.NW_016107633v1 1589115 1 - 2680843 A- i cebCap1.NW_016107633v1 I 1 I 19 s aotNan1.NW_018505377v1 339427 1 - 4471408 A- i aotNan1.NW_018505377v1 I 1 I 19 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289067 0 + 643850 C e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592658 2 - 122678785 I e macNem1.NW_012011689v1 4502271 315 - 13342542 I e rheMac8.chr19 30181645 19 + 53671032 I a score=42806.000000 s hg38.chr19_GL383574v1_alt 45739 47 + 155864 A-------------CCATGGTAAAGAACAGCTTT--T--AAAAAAAAatcgcttctcagccttt s panTro5.chr19 36114344 60 + 61309027 GTACACCTTTATTCCCACGGTAAAGAACAGCTTT--T--AAAAAAAAatcgcttctcagccttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39860315 60 + 64411610 GTACACCTTTATTCCCACGGTAAAGAACAGCTTT--T--AAAAAAAAatcgcttctcagccttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6278117 61 - 8369475 GTACACCTTTATTCCCACGGTAAAGAACAGCTTT--TAAAAAAAAAAatcgcttctcagcc-tt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872853 60 - 106955855 GTACACCTTTGTTCCCACGGTAAAGAACAGCTTT--T--TTAAAAAAatcacttctcggccttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34634573 33 + 59248254 GTACACCTTTATTCCCACGGTAAAGAACAGCTT------------------------------- i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5433081 36 + 7714307 GTACACCTTTATTCCCACGGTAAAGAACAGCTTTAA---------------------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29240246 34 + 50890351 GTACACCTTTATTCCCACGGTAAAGAACAGCTTT------------------------------ i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863880 34 - 2385121 GTACACCTTTATTCCCACGGTAAAGAACAGCTTT------------------------------ i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28533625 23 + 49145316 GTACA-CTTTATT-CCATGGTAAAG--------------------------------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5378173 23 + 8899380 GTACA-CTTTATT-GCATGGTAAAG--------------------------------------- i saiBol1.JH378197 C 0 C 0 s canFam3.chr1 4592660 10 - 122678785 GTACACCTTT------------------------------------------------------ i canFam3.chr1 I 2 C 0 s dasNov3.JH563638 289067 11 + 643850 --------------CCACAGTAAAG--------------------------------------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e aotNan1.NW_018505377v1 339428 19 - 4471408 I e cebCap1.NW_016107633v1 1589116 19 - 2680843 I e colAng1.NW_012111697v1 2300158 34 + 4274983 I e macNem1.NW_012011689v1 4502271 315 - 13342542 I e rheMac8.chr19 30181645 19 + 53671032 I a score=-6670.000000 s hg38.chr19_GL383574v1_alt 45786 19 + 155864 tggctaagctcaagtgt-----aA s panTro5.chr19 36114404 18 + 61309027 tggctaagctcaagtgt------a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39860375 18 + 64411610 tggctaagctcaagtgt------a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6278178 17 - 8369475 tggctaagctcaagtgt------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872913 24 - 106955855 tggctaagatcaagtgtaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181664 19 + 53671032 CGGTAAAGAACAGCTTT-----AA i rheMac8.chr19 I 19 C 0 s macFas5.chr19 34634606 3 + 59248254 ----------------T-----AA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5433117 2 + 7714307 ----------------------CA i cerAty1.NW_012005268v1 C 0 C 0 s canFam3.chr1 4592670 12 - 122678785 --ACTGAAATTTTC---------- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289078 0 + 643850 C e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29240280 0 + 50890351 C e aotNan1.NW_018505377v1 339428 19 - 4471408 I e cebCap1.NW_016107633v1 1589116 19 - 2680843 I e saiBol1.JH378197 5378196 0 + 8899380 C e calJac3.chr22 28533648 0 + 49145316 C e colAng1.NW_012111697v1 2300158 34 + 4274983 I e manLeu1.NW_012102454v1 863914 0 - 2385121 C e macNem1.NW_012011689v1 4502271 315 - 13342542 I a score=21736.000000 s hg38.chr19_GL383574v1_alt 45805 5 + 155864 AAAAA s panTro5.chr19 36114422 5 + 61309027 AAAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39860393 5 + 64411610 AAAGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6278195 5 - 8369475 aAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872937 5 - 106955855 aaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181683 5 + 53671032 AAAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34634609 5 + 59248254 AAAAA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5433119 5 + 7714307 AAAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29240280 5 + 50890351 AAAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863914 5 - 2385121 AAAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2300192 5 + 4274983 AAAAA i colAng1.NW_012111697v1 I 34 C 0 s canFam3.chr1 4592682 4 - 122678785 -ATGG i canFam3.chr1 C 0 I 1 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289078 0 + 643850 C e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e aotNan1.NW_018505377v1 339428 19 - 4471408 I e cebCap1.NW_016107633v1 1589116 19 - 2680843 I e saiBol1.JH378197 5378196 0 + 8899380 C e calJac3.chr22 28533648 0 + 49145316 C e macNem1.NW_012011689v1 4502271 315 - 13342542 I a score=226738.000000 s hg38.chr19_GL383574v1_alt 45810 25 + 155864 AAAAAACAGC--TTTAAATCTCAAGCT s panTro5.chr19 36114427 25 + 61309027 AAAAAACAGC--TTTAAATCTCAAGCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39860398 25 + 64411610 AAAAAACAGC--TTTAAATCTCAAGCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6278200 25 - 8369475 AAAAAACAGC--TTTAAATCTCAAGCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872942 25 - 106955855 aaaaaaaaGC--TTTAAATCTCAAGCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181688 25 + 53671032 AAAAAGCAAC--TTTAAATCTCAAGCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34634614 25 + 59248254 AAAAAGCAAC--TTTAAATCTCAAGCT i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5433124 25 + 7714307 AAAAAACAAC--TTTAAATCTCAAGCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29240285 25 + 50890351 AAAAAACAAC--TTTAAATCTCAAGCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863919 25 - 2385121 AAAAAGCAAC--TTTAAATCTCAAGCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2300197 25 + 4274983 AAAAAACAAC--TTTAAATCTCAAGCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28533648 21 + 49145316 ----AACAGT--TTTAAATCTCAACTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5378196 21 + 8899380 ----AACAGT--TTTAAATCTCAAGTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1589135 25 - 2680843 AAAGAACAGT--TTTAAATCTTAAATT i cebCap1.NW_016107633v1 I 19 C 0 s aotNan1.NW_018505377v1 339447 24 - 4471408 AAAGAACAGT--TTTAAAT-TCAAGTT i aotNan1.NW_018505377v1 I 19 C 0 s canFam3.chr1 4592687 27 - 122678785 AAAGAATAACTTTTTAAATCTCAAATC i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 289078 21 + 643850 ----AATAAC--TTCAAATCTCAAGCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e macNem1.NW_012011689v1 4502271 315 - 13342542 I a score=818532.000000 s hg38.chr19_GL383574v1_alt 45835 83 + 155864 TTTGCCCCTAATCTTTTAAAATTTCATTGAAATA-----ATTAT----CAGTTTAC--TG----TTTCactgcaccacaaatttagtttcaggtgtat s panTro5.chr19 36114452 83 + 61309027 TTTGCCCCTAATCTTTTAAAATTTCATTGAAATA-----ATTAT----CAGTTTAC--TG----TTTCactgcactacaaatttagtttcaggtgtat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39860423 83 + 64411610 TTTGCCCCTAATCTTTTAAAATTTCATTGAAATA-----ATTAT----CAGTTTAC--TG----TTTCACTGCACTACAAATTTAGTTTCAGGTGTAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6278225 83 - 8369475 TTTGCCCCTAATCTTTTAAAATTTCATTGAAATA-----ATTAT----CAGTTTAC--TG----TTTCactgcaccacaaatttagtttcaggtgtat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63872967 83 - 106955855 TTTGCCCCTAATCTTTTAAAATTTCATTGAAATA-----ATTAT----CAGTTTAT--TG----TTTCACTGCACCACAAATTTAGTTTCAGGTGTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181713 88 + 53671032 TTTGCCCCTAATCTTTTAAAATTTCTTTGAAATAATTATATTAT----CAGTTTAC--TG----TTTCactgcaccacaaatttagtttcaggtgtat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34634639 88 + 59248254 TTTGCCCCTAATCTTTTAAAATTTCTTTGAAATAATTATATTAT----CAGTTTAC--TG----TTTCactgcaccacaaatttagtttcaggtgtat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4502586 81 - 13342542 TTTGCCCCTAATCTTTTAAAATTTCTTTGAAATA-----ATTAT----CAGTTTAC--TG----TTTCACTG-ACCAC-AATTTAGTTTCAGGTGTAT i macNem1.NW_012011689v1 I 315 I 1038 s cerAty1.NW_012005268v1 5433149 88 + 7714307 TTTGCCCCTAATCTTTTAAAATTTCTTTGAAATAATTATATTAT----CAGTTTAC--TC----TTTCactgcaccacaaatttagtttcaggtgtat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29240310 88 + 50890351 TTTGCCCCTAATCTTTTCAAATTTCTTTGAAATAATTATATTAT----CAGTTTAC--TG----TTTCactgcaccacaaatttagtttcaggtgtat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 863944 88 - 2385121 TTTGCCCCTAATCTTTTAAAATTTCTTTGAAATAATTATATTAT----CAGTTTAC--TG----TTTCactgcaccacaaatttagtttcaggtgtat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2300222 88 + 4274983 TTTGCCCCTAATCTTTTAAAATTTCTTTGAAATAATTATATTAT----CAGTTTAC--TG----TTTCactgcaccacaaatttagtttcaggtgtat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28533669 89 + 49145316 TTTGTCCCTAATCTTTCAAAATTTCAttgaaata-----attatttatcagctaac--tc--tgtttgactgtaccacaaatgtagtttcagatgtat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5378217 85 + 8899380 TTCGTCCCTAATCTTTTAAAATTTCATTGAAATA-----ATTATTTACCAGTTAAC--TC------Tgactgcaccacaaatttagtttcaggtgtat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1589160 81 - 2680843 TTTGTCCCTAATCTTTTAAAATTTCATTGAAATC-----ATTAT----CAGGTAAC--TC------Tgactgcaccacaaatttagtttcaggtgtat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 339471 89 - 4471408 TTTGTCCCTAATCTTTTAAAATTTCATTGAAATA-----ATTATTTATCAGGTAAC--TC--TGTTTgactgcaccacaaatttagtttcaggtgtat i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4592714 89 - 122678785 CTAATCCTTAATCTTTCTTAGTTCAATTGAAATAACCA-TTTAT----CAGTTTACCTTG----TTTCTctgaatcacaaatccaatttcaggtatat i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 289099 71 + 643850 -GTGGCTCGATT------------------GATAATCA-TTTAT----CAATTTAT--TCTTTGTTTCACTGAATCACTAATA-AGTTTCAAGGGTAT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I a score=1320453.000000 s hg38.chr19_GL383574v1_alt 45918 137 + 155864 cttgaaactcattgatatgctaataagttttattaaaattgttaaattccttcctgtgaatatac-tttttatacagatgtgactt---aagt-at-ttaaatgttttacttattcacaaaataacaaagaatggc-aaaaaaa s panTro5.chr19 36114535 137 + 61309027 cttgaaactcattgatatgctaataagttttattaaaattgttaaattccttcctatgaatatac-tttttatacagatgtgactt---aagt-at-ttaaatgttttacttattcacaaaataacaaagaatggc-aaaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39860506 138 + 64411610 CTTGAAACTCATTGATATGCTAATAAGTTTTATTAAAATTGTTAAATTCcttcctatgaatatac-tttttatacagatgtgactt---aagt-at-ttaaatgttttacttattcacaaaataacaaagaatggcaaaaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6278308 137 - 8369475 cttgaaactcattgatatgctaataagttttattaaaattgttaaattccttcctatgaatatac-tttttatacagatgtgactt---aagt-at-ttaaatgttttacttattcacataataacaaagaatggc-aaaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63873050 136 - 106955855 CTTGAAACTCATTGATATGCTAATAAGTTTTATTAACATTATTAAATTCcttcctatgaatatac-tttttatacagatgtgactt---aagt-at-ttaaatgttttacttattcacaaaataacaaagaatggc--aaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181801 135 + 53671032 cttgacactcagtaatatgctaacaagttttattaatattattaaattccttccaatgaatatac-tttttatacaggtgtgactt---aagc-at-ttaaatgttttacttattcacaaaataaaaaagaacggc---aaaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34634727 135 + 59248254 cttgacactcattaatatgctaacaagttttattaatattattaaattccttccaaTGAATATAC-TTTTTATACAGGTGTGACTT---AAGC-AT-TTAAATGTTTTACTTATTCACAAAATAAAAAAGAACGGC---AAAAA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5433237 135 + 7714307 cttgacactcattaatatgctaacaagttttgttaaaattattaaattccttccaatgaatgtac-tttttatacaggtgtgactt---aagc-at-ttaaatgttttacttattcacaaaataaaaaagaacgac---aaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29240398 135 + 50890351 cttgacactcattaatatgctaacaagttttgttaaaattattaaattccttccaatgaatatac-tttttatacaggtgtgactt---aagc-at-ttaaatgttttacttattcacaaaataaaaaagaacggc---aaaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 864032 135 - 2385121 cttgacactcattaatatgctaacaagttttgttaaaattattaaattccttccaatgagtatac-tttttatacaggtgtgactt---aagc-at-ttaaatgttttacttattcacaaaataaaaaagaacggc---aaaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2300310 135 + 4274983 cttggcactcattaacatgctaacaagttttgttaaaattattaaattccttccaatgaatatac-tttttatacaggtatgactt---aagc-at-ttaaatgttttacttattcacaaaataaaaaagaacggc---aaaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28533758 133 + 49145316 cttgaaactcattaatatgctaacaagttttgttaaaattatt--attctttcctctgagtatac-tttttatacaaatgtgactt---aagt-at-ttaaatgttttacttattcacaaaataataaagaatgac---caaaa i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5378302 135 + 8899380 cttgaaactcattaatatgctaacaagttttgttaaaattattacattctttcctctgaatatgc-tttttatacagatgtgactt---aagt-at-ttaaatgttttacttattcacaaaataataaagaatgac---caaaa i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107633v1 1589241 135 - 2680843 cttgaaactcattaatatgctaacaagttttgttaaaattaTTACATTTTTTCctcttaatatac-tttttatacagatgtgactt---aagt-at-ttaaatgttttacttattcacaaaataataatgaatgac---caaaa i cebCap1.NW_016107633v1 C 0 I 813 s aotNan1.NW_018505377v1 339560 135 - 4471408 cttgaaactcattaatatgctaacaagttttgttaaaattattacattctttcctctgaatatac-tttttatacagttgtgactt---aagt-at-ttaaatgttttacttattcacaaaataataaagaatgac---caaaa i aotNan1.NW_018505377v1 C 0 I 1 s canFam3.chr1 4592803 135 - 122678785 cttgaaacccattagtatgttaacaagttttattaaaatta----atTCctttttataaatatac-tttttatgtagttgtgacttttcaagtaat-gtaaatgtttcacttattcataaaatcaaaaagggtggg---aaaaa i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 289170 137 + 643850 TTTGATAATTATTAGTACTCTAAAAAGtttttttta-attatttaatttCcttctatcaatatacttttttatatagttttgacttttgaagt-atattaaatgctttacttattcacaaaattaaaaagggtggg---aaa-- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e macNem1.NW_012011689v1 4502667 1038 - 13342542 I a score=170120.000000 s hg38.chr19_GL383574v1_alt 46055 18 + 155864 aagcaaa--ctaaaactgaa s panTro5.chr19 36114672 18 + 61309027 aagcaaa--ctaaaactgaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39860644 18 + 64411610 aagcaaa--ctaaaactgaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6278445 18 - 8369475 aagcaaa--ctaaaactgaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63873186 18 - 106955855 aagcaaa--ctaaaactgaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181936 18 + 53671032 aagcaaa--ctaaaactgaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34634862 18 + 59248254 AAGCAAA--CTAAAACTGAA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5433372 18 + 7714307 aagcaaa--ctaaaactgaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29240533 18 + 50890351 aagcaaa--ctaaaactgaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 864167 18 - 2385121 aagcaaa--ctaaaactgaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2300445 18 + 4274983 aagcaaa--ctaaaactgaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28533892 18 + 49145316 aagcaaa--ctaaaactgaa i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5378438 18 + 8899380 aagcaaa--ctaaaactgaa i saiBol1.JH378197 I 1 C 0 s aotNan1.NW_018505377v1 339696 18 - 4471408 aagcaaa--ctaaaactgaa i aotNan1.NW_018505377v1 I 1 I 1133 s canFam3.chr1 4592940 16 - 122678785 ----aaatccttaaattgga i canFam3.chr1 I 2 C 0 s dasNov3.JH563638 289307 20 + 643850 aagcaaacccttaaattgaa i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e macNem1.NW_012011689v1 4502667 1038 - 13342542 I a score=6392.000000 s hg38.chr19_GL383574v1_alt 46073 1 + 155864 t s panTro5.chr19 36114690 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39860662 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6278463 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63873204 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181954 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34634880 1 + 59248254 T i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5433390 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29240551 1 + 50890351 t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 864185 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2300463 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28533910 1 + 49145316 c i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5378456 1 + 8899380 c i saiBol1.JH378197 C 0 C 0 s canFam3.chr1 4592956 1 - 122678785 t i canFam3.chr1 C 0 I 934 s dasNov3.JH563638 289327 1 + 643850 t i dasNov3.JH563638 C 0 I 2531 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e macNem1.NW_012011689v1 4502667 1038 - 13342542 I a score=12007.000000 s hg38.chr19_GL383574v1_alt 46074 2 + 155864 ga s panTro5.chr19 36114691 2 + 61309027 ga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39860663 2 + 64411610 ga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6278464 2 - 8369475 ga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63873205 2 - 106955855 ga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181955 2 + 53671032 ga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34634881 2 + 59248254 GA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5433391 2 + 7714307 ga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29240552 2 + 50890351 ga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 864186 2 - 2385121 ga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2300464 2 + 4274983 ga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28533911 2 + 49145316 aa i calJac3.chr22 C 0 I 1128 s saiBol1.JH378197 5378457 2 + 8899380 aa i saiBol1.JH378197 C 0 I 1467 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289328 2531 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e macNem1.NW_012011689v1 4502667 1038 - 13342542 I a score=1611189.000000 s hg38.chr19_GL383574v1_alt 46076 355 + 155864 gctgggcgcggtggctcacgcctgtaatcccagcactttgggaggct---gt-gggcggatcacctgaagtcaggagttcaagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaattagctggacgtggtggtggtgcatgcctgtaatcccggctactagggaggctgaggtaggagaatcgcttg-aacctgtgaggcagaggttgcagtgagctgagatcgtgccattgcactccagtctaggccacaacagcaaaact-ccgtctaa----aaataaataaataaataaaactgaatgaatataaac--agaaaccacagatgctattacatattaaattgataat s panTro5.chr19 36114693 356 + 61309027 gctgggtgcggtggctcatgcctgtaatcccagcactttgggaggctgaggt-gggcggatcacctgaagtcaggagttcaagaccagcctgaccaacatggagaaaccccacctctactaaaaatacaaaattagctggacgtggtggtggtgcatgcctgtaatcccagctactagggaggctgaggtaggagaatcgcttg-aacccatgaggcagaggttgcagtgagctgagatcgtgccattgcactccagtctaggccacaacagcaaaact-ccgtctaaaaataaataaataaataaataaaactgaatgaat--------agaaaccacagatgctattacatattaaattgataat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39860665 356 + 64411610 gctgggtgcggtggctcatgcctgtaatcccagcactttgggaggctgaggt-gggcggatcacctgaagtcaggagttcaagaccagcctgaccaacatggagaaaccccacctctactaaaaatacaaaattagctggacgtggtggtggtgcatgcctgtaatcccagctactagggaggctgaggtaggagaatcgcttg-aacccatgaggcagaggttgcagtgagctgagatcgtgccattgcactccagtctaggccacaacagcaaaact-ccgtctaaaaataaataaataaataaataaaactgaatgaat--------agaaaccacagatgctattacatattaaattgataat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6278466 357 - 8369475 gctgggcgtgg-ggctcacgcctgtaatcccagcactttgggaggctgaggt-gggtggatcacctgaagtcaggagttcaagaccagcctgaccaacatggagaaaccccatctctactaaaaacacaaaattagctggacgtggtggtggtgcatgcctgtaatcccagctactagggaggctgaggtaggagaatcgcttg-aacccgtgaggcagaggttgcagtgagctgagatcgtgccattgcactccagtctaggccacaacagcaaaact-ccgtctaa----aaataaataaataaataaaactgaatgaatataaac--agaaaccacagatgctattacatattaaattgataat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63873207 352 - 106955855 gctgggcacggtggctcatacctgtaatcccagcactttgggaggctgaggc-aggcagatcacctgaagtcaggagttcaagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaattagctggac---gtggtggtgcatgcctgtaatcccagctactagggaggctgaggtaggagaatcgcttg-aacccgggaggcagaggttgcagtgagctgagatcgtgccattgcactccagcctaggccacaacagcaaaactcccgtctaa--------aaataaataaataaaactgaatgaatataaac--agaaaccacagatgctattacatattaaattgataat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30181957 355 + 53671032 gctgggcgcggtggctcacgcctgtaatgccagcactttgggagactaaggcgggatagatcacctgaagtagggatttcgagaccagcctggccaacatggagaaaccgcacctctactaaaaatacagaattagctggac---gtggtggtgcatgcctgtaatcccagctactcgggaggctgaggtaggagaattgcttgaaacccaggaggcagaggttgcaatgagctgagatcgtgccattgcactccagtctgggccacaacagcaaaact-ccgtctaa--------aaaaaaatagataaaactgaatgaatatgaacagagaaaccacagatgctattacatattaaattgataat i rheMac8.chr19 C 0 I 1644 s macFas5.chr19 34634883 354 + 59248254 gctgggcgcggtggctcacgcctgtaatgccagcactttgggagactaaggc-ggatagatcacctgaagtagggatttcgagaccagcctggccaacatggagaaaccgcacctctactaaaaatacagaattagctggac---gtggtggtgcatgcctgtaatcccagctactcgggaggctgaggtaggagaattgcttgaaacccaggaggcagaggttgcaatgagctgagatcgtgccattgcactccagtctgggccacaacagcgaaact-ccgtctaa--------aaaaaaatagataaaaCTGAATGAATATGAACAGAGAAACCACAGATGCTATTACATATTAAATTGATAAT i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5433393 354 + 7714307 actgggcgcggtggctcacgcctgtaatgccagcactttgggagactaaggc-gggtagatcacctgaagtagggagttcgagaccagcctggccaacatggagaaaccccacctctactaaaaatacagaattagctggac---gtggtggtgtatgcctgtaatcccagctactcgggaggctgaggtaggagaatcgcttgaaaccgaggaggcagaggttgcagtgagccgagatcgtgccattgcactccagtctgggccacaacagcgaaact-ccgtctaa--------aaaaaaatagataaaactgaatgaatatgaacagagaaaccacagatgctattacatattaaattgataat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29240554 354 + 50890351 gctgggcgcagtggctcatgcctgtaatgccagcactttgggagactaaggc-gggtagatcacctgaagtagggagttcgagaccagcctggccaacatggagaaaccccacctctactaaaaatacagaattagctggac---gtggtggtgcatgcctgtaatcccagctacttgggaggctgaggtaggagaatcgcttgaaacccaggaggcagaggttgcaatgagccgagatcgtgccattgcactccagtctgggccacaacagcgaaact-ccgtctaa--------aaaaaaatagataaaactgaatgaatatgaacagagaaaccacagatgctattacatattaaattgataat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 864188 354 - 2385121 gctgggcgcggtggctcacgcctgtaatgccagcactttgggagactaaggc-ggatagatcacctgaagtagggagttcgagaccagcctggccaacatggagaaaccgcacctctactaaaaatacagaattagctggac---gtggtggtgcatgcctgtaatcccagctactcgggaggctgaggtaggagaatcgcttgaaacccaggaggcagaggttgcaatgagctgagatcgtgccattgcactccagtctgggccacaacagcgaaact-ccgtctaa--------aaaaaaatagataaaactgaatgaatatgaacagagaaaccacagatgctattacatattaaattgataat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2300466 352 + 4274983 gctgggcacagtggctcacgcctgtaatgccagcactttgggagactgaggc-aggcggatcacctgaagtagggagttcgagaccagcctggccaacatggagaaaccccacctctactaaaaatacagaattagccggac---gtggtggtgcatgcctgtaatcccagctactcgggaggctgaggtaggagaattgcttgaaacccgggaggcagaggttgcgatgagcagagatcgtgccattgcactccagtctgggccacaacagcaaaact-ccgtctaa--------aaaaaaatagataaaactgaatgaatatgaac--agaaaccacagatgctgttacatattgaattgataat i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289328 2531 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e macNem1.NW_012011689v1 4502667 1038 - 13342542 I a score=1820.000000 s hg38.chr19_GL383574v1_alt 46431 2 + 155864 at s panTro5.chr19 36115049 2 + 61309027 at i panTro5.chr19 C 0 C 0 s panPan2.chr19 39861021 2 + 64411610 at i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6278823 2 - 8369475 at i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63873559 2 - 106955855 at i nomLeu3.chr10 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289328 2531 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29240908 0 + 50890351 C e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e colAng1.NW_012111697v1 2300818 0 + 4274983 C e manLeu1.NW_012102454v1 864542 0 - 2385121 C e cerAty1.NW_012005268v1 5433747 0 + 7714307 C e macNem1.NW_012011689v1 4502667 1038 - 13342542 I e macFas5.chr19 34635237 0 + 59248254 C e rheMac8.chr19 30182312 1644 + 53671032 I a score=10448.000000 s hg38.chr19_GL383574v1_alt 46433 13 + 155864 aaccacacagagg s panTro5.chr19 36115051 13 + 61309027 aaccacacagagg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39861023 13 + 64411610 aaccacacagagg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6278825 13 - 8369475 aaccacacagagg i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34635237 10 + 59248254 ---CACACAGAAG i macFas5.chr19 C 0 I 2550 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289328 2531 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29240908 0 + 50890351 C e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e colAng1.NW_012111697v1 2300818 0 + 4274983 C e manLeu1.NW_012102454v1 864542 0 - 2385121 C e cerAty1.NW_012005268v1 5433747 0 + 7714307 C e macNem1.NW_012011689v1 4502667 1038 - 13342542 I e rheMac8.chr19 30182312 1644 + 53671032 I e nomLeu3.chr10 63873561 0 - 106955855 C a score=158787.000000 s hg38.chr19_GL383574v1_alt 46446 298 + 155864 gctgggtgcggtggcttacgcctgtaatcccagcactttgggaggccaaggcgtgtggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaactccgtctctactaaaaatacaaaaaaattagccgggcgtggtggtgggcgcctgtagttccagctactcgggaggctgaggcaggagcatggcgtgaacccaggaggcggagcttgcggtgagccaagatcgtaccactgcactccagcctgggcgacagagtgagactccgtctcaata---------------------aaacaacaaaaaa s panTro5.chr19 36115064 298 + 61309027 gctgggtgcggtggcttacgcctgtaatcccagcattttgggaggccaaggcgggtggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaactccgtctctactaaaaatacaaaaaaattagccgggcgtggtggtggacgcctgtagttccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcggtgagccgagatcgtaccactgcactccagcctgggcgacagagtgagactctgtctcaata---------------------aaacaacaaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39861036 297 + 64411610 gctgggtgcggtggcttacgcctgtaatcccagcattttgggaggccaaggcgggtggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaactccgtctctactaaaaatacaaaaaaattagccgggcgtggtggtggacgcctgtagttccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcggtgagccgagatcgtaccactgcactccagcctgggcgacagagtgagactctgtctcaata---------------------aaacaac-aaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6278838 316 - 8369475 gctgggtgcggtggcttacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaactccgtctctactaaaaatacaaaaaaattagccgggcgtggtggtggacgcctgtagtcccagcta--cgggaggctgaggcaggagaatggcgtgaacccaggaggcggagcttacagtgagccgagatcgtaccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaacaaacaac-aaaaa i gorGor5.CYUI01015150v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289328 2531 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29240908 0 + 50890351 C e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e colAng1.NW_012111697v1 2300818 0 + 4274983 C e manLeu1.NW_012102454v1 864542 0 - 2385121 C e cerAty1.NW_012005268v1 5433747 0 + 7714307 C e macNem1.NW_012011689v1 4502667 1038 - 13342542 I e macFas5.chr19 34635247 2550 + 59248254 I e rheMac8.chr19 30182312 1644 + 53671032 I e nomLeu3.chr10 63873561 0 - 106955855 C a score=2820.000000 s hg38.chr19_GL383574v1_alt 46744 3 + 155864 aac s panTro5.chr19 36115362 3 + 61309027 aac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39861333 3 + 64411610 aac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6279154 3 - 8369475 aac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63873561 3 - 106955855 aac i nomLeu3.chr10 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289328 2531 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29240908 0 + 50890351 C e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e colAng1.NW_012111697v1 2300818 0 + 4274983 C e manLeu1.NW_012102454v1 864542 0 - 2385121 C e cerAty1.NW_012005268v1 5433747 0 + 7714307 C e macNem1.NW_012011689v1 4502667 1038 - 13342542 I e macFas5.chr19 34635247 2550 + 59248254 I e rheMac8.chr19 30182312 1644 + 53671032 I a score=336157.000000 s hg38.chr19_GL383574v1_alt 46747 114 + 155864 cacacagaggaaaaaataattcaggtaacttttacactcttagtaggatatattctaacaacaaatagaactactaagaaaacttgactttgatttgtattattggtgtta----tta s panTro5.chr19 36115365 118 + 61309027 cacacagaggaaaaaataattcagataacttttacactcttagtaggatatattctaacaacaaatagaactactaagaaaacttgactttgatttgtattattggtgttattattta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39861336 114 + 64411610 cacacagaggaaaaaataattcagataacttttacactcttagtaggatatattctaacaacaaatagaactactaagaaaacttgactttgatttgtattattggtgtta----tta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6279157 118 - 8369475 cacacagaggaaaaaataattcagataacttttacactcttagtaggatatattctaacaacaaatagaagtattaagaaaacttgactttgatttgtattattggtgttattattta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63873564 114 - 106955855 cacacagaggaaaaaataattcagataacttttacactcttagtaggatatattctaacaacaaatagaactattaagaaaacgtgactttgatttgtattattggtgtta----ttt i nomLeu3.chr10 C 0 C 0 s cerAty1.NW_012005268v1 5433747 112 + 7714307 cacacagaagtaaaaataattcaggtgacttttacgcacttagtaggatatattcta--aacaaatagaactatttagaaaacttgactttgatttgtattattggcgttt----ttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29240908 114 + 50890351 cacacagaagaaaaaataattcagatgacttttacacgcttagtaggatatattctaacaacaaatagaactatttagaaaacttgactttgatttgtattattggtgttt----ttg i chlSab2.chr6 C 0 I 9 s manLeu1.NW_012102454v1 864542 114 - 2385121 cacacagaagaaaaaataattcagatgacttttacgcgcttagtaggatatattctaacaacaaatagaactatttagaaaacttgactttgatttgtattattggtgttt----ttg i manLeu1.NW_012102454v1 C 0 I 35 s colAng1.NW_012111697v1 2300818 114 + 4274983 cacacagaggaaaaaataattctgataacttttacacgcttagtaggatatattctaacaacaaatagaactatttagaaaacttgactttgatttgtattattggtgttt----ttg i colAng1.NW_012111697v1 C 0 I 8 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289328 2531 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e macNem1.NW_012011689v1 4502667 1038 - 13342542 I e macFas5.chr19 34635247 2550 + 59248254 I e rheMac8.chr19 30182312 1644 + 53671032 I a score=13077.000000 s hg38.chr19_GL383574v1_alt 46861 13 + 155864 tttatttatttat s panTro5.chr19 36115483 13 + 61309027 tttatttatttat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39861450 13 + 64411610 tttatttatttat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6279275 13 - 8369475 tttatttatttat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63873678 6 - 106955855 tttatt------- i nomLeu3.chr10 C 0 C 0 s cerAty1.NW_012005268v1 5433859 13 + 7714307 gtttttggttttt i cerAty1.NW_012005268v1 C 0 I 18 s chlSab2.chr6 29241031 12 + 50890351 -tttttttttttt i chlSab2.chr6 I 9 I 1 s colAng1.NW_012111697v1 2300940 13 + 4274983 tttttttgttttt i colAng1.NW_012111697v1 I 8 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289328 2531 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e manLeu1.NW_012102454v1 864656 35 - 2385121 I e macNem1.NW_012011689v1 4502667 1038 - 13342542 I e macFas5.chr19 34635247 2550 + 59248254 I e rheMac8.chr19 30182312 1644 + 53671032 I a score=7082.000000 s hg38.chr19_GL383574v1_alt 46874 7 + 155864 ttattta s panTro5.chr19 36115496 7 + 61309027 ttattta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39861463 7 + 64411610 ttattta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6279288 7 - 8369475 ttattta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63873684 4 - 106955855 ---tttt i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29241044 7 + 50890351 ttttttt i chlSab2.chr6 I 1 C 0 s colAng1.NW_012111697v1 2300953 7 + 4274983 ttgtttt i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289328 2531 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e manLeu1.NW_012102454v1 864656 35 - 2385121 I e cerAty1.NW_012005268v1 5433872 18 + 7714307 I e macNem1.NW_012011689v1 4502667 1038 - 13342542 I e macFas5.chr19 34635247 2550 + 59248254 I e rheMac8.chr19 30182312 1644 + 53671032 I a score=8649.000000 s hg38.chr19_GL383574v1_alt 46881 4 + 155864 tttt s panTro5.chr19 36115503 4 + 61309027 tttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39861470 4 + 64411610 tttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6279295 4 - 8369475 tttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63873688 4 - 106955855 tttt i nomLeu3.chr10 C 0 C 0 s cerAty1.NW_012005268v1 5433890 4 + 7714307 tttt i cerAty1.NW_012005268v1 I 18 C 0 s chlSab2.chr6 29241051 3 + 50890351 -ttt i chlSab2.chr6 C 0 I 1 s colAng1.NW_012111697v1 2300960 3 + 4274983 -ttt i colAng1.NW_012111697v1 C 0 I 1 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289328 2531 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e manLeu1.NW_012102454v1 864656 35 - 2385121 I e macNem1.NW_012011689v1 4502667 1038 - 13342542 I e macFas5.chr19 34635247 2550 + 59248254 I e rheMac8.chr19 30182312 1644 + 53671032 I a score=1048159.000000 s hg38.chr19_GL383574v1_alt 46885 361 + 155864 gagataagatctggctctcacccaggctggagtgcagtggcacgatcccggctcattgcaacctccgcctcccaggctcaagccatcctcccacctcaacctcccgagtagctgggattataggcatgcaccaccactcccggctaga----------------tttttcttttgtattttttgtggagacagggtttccccatattttccaggctggtctcaaacttgtgaccttgagtgatccgcccatcttggcctccaaaagtgttgggattacaggtgtgagccactgcacccagccaggtgttaattcttaaactgttttgtatgtattataggaaagggcaaatgaataaaatacttatgttgggaaata s panTro5.chr19 36115507 360 + 61309027 gagataagatctggctctcacccaggctggagtgcagtggcacgatcccggctcactgcaacctccgcctcccaggctcaagccatcctcccacctcaacctcccgagtagctgggattataggcatgcaccaccactcccggctaga----------------ttttt-ttttgtattttttgtggagacagggtttccccatattttccaggctggtctcaaacttgtgacctcgagtgatccgcccaccttgacctccaaaagtgttgggattacaggtatgagccactgcacccagccaggtgttaattcttaaactgttttgtatgtattataggaaagggcaaatgaataaaatacttatgttgggaaata i panTro5.chr19 C 0 C 0 s panPan2.chr19 39861474 360 + 64411610 gagataagatctggctctcacccaggctggagtgcagtggcacgatcccggctcactgcaacctccgcctcccaggctcaagccatcctcccacctcaacctcccgagtagctgggattataggcatgcaccaccactcccggctaga----------------ttttt-ttttgtattttttgtggagacagggtttccccatattttccaggctggtctcaaacttgtgacctcgagtgatccgcccaccttgacctccaaaagtgttgggattacaggtgtgagccactgcacccagccaggtgttaattcttaaactgttttgtatgtattataggaaagggcaaatgaataaaatacttatgttgggaaata i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6279299 358 - 8369475 gagataagatctggctctcacccaggctggagcgcagtggcacgatcccggctcactgcaacctccgcctcccaggctcaagccatcctcccacctcaacctcccaagtagctgggattataggcatgcaccaccactcccggctaga----------------ttttt-ttttgtattttttgtggagacaggg-ttccccatattttccaggctggtctcaaacttgtgacctcgagtgatcc-tccaccttggcctccaaaagtgttgggattacaggtgtgagccactgcacccagccaggtgttaattcttaaactgttttgtatatattataggaaagggcaaatgaataaaatacttatgttgggaaata i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63873692 359 - 106955855 gagataagatctggctctcacccaggctggagtgcagtggcacgatcccagctcactgtaacctccgcctcccaggctcaagccatcctcccacttcagcgtcctgagtagctgggattataggcatgcaccaccgctcccggctaga----------------ttttttttttgtatgaatt-ccaccacattggttccccatgttttccagactggtctcaaacttgtgacctgaagtgatccactcacctcggcctccaaaagtgttgggattacaggtgtgagccactgca-ccagccaggtgttaattcttaaactgttttgtatgtattataggaaagggcaaatgaataaaatacttacgttgggaaata i nomLeu3.chr10 C 0 C 0 s cerAty1.NW_012005268v1 5433894 376 + 7714307 gagatagcgtctggctcacacccaggctggagtgtagtggcacgatcccgactcactacaacctctgcctcccaggcccaagccatcctcccacctcaacctcccaagtatctgagattataggtgtgcaccaccactcccagctagatttcttttttttttttttttt-ttttgtattttttgtagagacaggattttcccctgttgtccaggctggtctcaaacttctgacattgagtgatctgcccaccttgggctccaaaagtcctgggattacaggtgtgagccactgcacccagccaggtgttaattcttaaacttttttgtatgtattataggatagggcaaatgaataaaatacttatattgggaaata i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29241055 372 + 50890351 gagataacgtctggctcacacccaggctggagtgtagtggcacgatcctgactcactacaacctctgcctcccaggccccagccatcctcccacctcaacctcccaagtatctgagattataggcgcgcaccaccactcccagctag----tttttttttttttttttt-ttttgtattttttgtagagacagggttttcccctgttgtccaggctggtctcaaacttctgacatcaagtgatctgcccaccttgggctccaaaagtgctgggattacaggtgtgagccactgcacccagccaggtgttagttcttaaactgttttgtatgtattataggatagggcaaatgaataaaatacttatattgggaaata i chlSab2.chr6 I 1 C 0 s manLeu1.NW_012102454v1 864691 373 - 2385121 gagataatgtctggctcacacccaggctggagtgtagtggcacgatcccgactcactacaacctctgcctcccaggcccaagccatcctcccacctcaacctcccaagtatctgagattataggcgtgcaccaccactcccagctaga---tttctttttttttttttt-tttttttttttttgtagagacagggttttcccctgttgtccaggctggtctcaaacttctgacatcgagtgatctgcccaccttgggctccaaaagtgctgggattacaggtgtgagccactgcacccagccaggtgttaattcttaaactgttttgtatgtattatagaatagggcaaatgaataaaatacttatattgggaaata i manLeu1.NW_012102454v1 I 35 C 0 s colAng1.NW_012111697v1 2300964 364 + 4274983 gagataacgtctggctcacacccaggctggagtgtagtggcacaatcctggctcactacaacctctgcctcccaggcccaagccatcctcccacctcaacctcccaagtatctgaggttataggcgtgcaccaccactcccagctaga------------tttcttttt-ttttgtattttttgtagagacggggtttccccttgttgtccaggctggtcttaaacttgtgacatcaagtgatctgcccacctcgggctctaaaagtgctgggattacaggtgtgaaccactgcacccagccaggtgttaattcttaaactgttttgtatgtattataggatagggcaaatgaataaaatatttatattgggaaata i colAng1.NW_012111697v1 I 1 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289328 2531 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e macNem1.NW_012011689v1 4502667 1038 - 13342542 I e macFas5.chr19 34635247 2550 + 59248254 I e rheMac8.chr19 30182312 1644 + 53671032 I a score=3080336.000000 s hg38.chr19_GL383574v1_alt 47246 794 + 155864 gtg-tttttaccatggagacggaagatataaatatggaatgggaaaggtgagaaagaaccctgtggtgctgaatgtaaatagatggtatgtgtatggactcattttttaaaaactggttatttcctagctctgttcgtagaaaggacctagaaacaatggaaaccccgtagcaagggacacatgtagactcagctcttagtttctaaataccactccccactaaaaggaacaagggcccattgaaaaacaaaggaaaagacatacttttttcatataaaaatgcctgctaataagtagaagcagtggta---------gataaagaaaattgccattttctaatctcagtataataattagcgaggattatcattagatgctgaagtcattgggtgaaaggtgttaggacagcatattaaggtggtcttaaagtatcatcccacaatttacaaagggggaaaaatgtacccttgtaacacagacatctggtggttaccaacttcgttgagtgctcaagtttagcattgccatgaacaattatgtgtctcctgttgtgatgattggggtggggg-gcaaaacataatatcacctttgtggggttcttgctgaaaatacagaatctaattttgaagaaatgggcttatatatccagaaggtgggttgttttgcgagacagttatccacactcttcaaaagattcaatattacaaagaatggagagaggcagcagaactgctttaggctggcaaagactgaagagacataacatccaaatgtaatatagaatcgaatactgggctttt s panTro5.chr19 36115867 794 + 61309027 gtg-tttttaccatggagacggaagatataaatatggaatgggaaaggtgagaaagaaccctgtggtgctgaatgtaaatagatggtatgcgtatggactcattttttaaaaactggttatttcctagctctgttcatagaaaggacctagaaacaatggaaaccccgtagcaagggacacatgtagactcagctcttagtttctaaataccactccccactaaaaggaacaagggcccattgaaaaacaaaggaaaagacatacttttttcatataaaaatgcctgctaataagtagaagcagtggta---------gataaagaaaattgccattttctaatctcagtataataattagcgaggattatcattagatgctgaagtcattgggtgaaaggtgttaggacagcatattaaggtggtcttaaagtatcatcccacaatttacaaagggggaaaaatgtacccttgtaacacagacatctggtggttaccagcttcgtcgagtgctcaagtttagcattgccatgaacaattatgtgtctcctgttgtgatgattggggtggggg-gcaaaacataatatcacctttgtggggttcttgctgaaaatgcagaatctaattttgaagaaatgggcttatatatccagaaggtgggttgttttgcgagacagttatccacactcttcaaaagattcaatattacaaagaatggagagaggcagcagaactgctttaggctggcaaagactgaagagacataacatccaaatgtaatatagaatcgaatactgggctttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39861834 794 + 64411610 gtg-tttttaccatggagacggaagatataaatatggaatgggaaaggtgagaaagaaccctgtggtgctgaatgtaaatagatggtatgcgtatggactcattttttaaaaactggttatttcctagctctgttcatagaaaggacctagaaacaatggaaaccccgtagcaagggacacatgtagactcagctcttagtttctaaataccactccccactaaaaggaacaagggcccattgaaaaacaaaggaaaagacatacttttttcatataaaaatgcctgctaataagtagaagcagtggta---------gataaagaaaattgccattttctaatctcagtataataattagcgaggattatcattagatgctgaagtcattgggtgaaaggtgttaggacagcatattaaggtggtcttaaagtatcatcccacaatttacaaagggggaaaaatgtacccttgtaacacagacatctggtggttaccagcttcgtcgagtgctcaagtttagcattgccatgaacaattatgtgtctcctgttgtgatgattggggtggggg-gcaaaacataatatcacctttctggggttcttgctgaaaatgcagaatctaattttgaagaaatgggcttatatatccagaaggtgggttgttttgcgagacagttatccacactcttcaaaagattcaatattacaaagaatggagagaggcagcagaactgctttaggctggcaaagactgaagagacataacatccaaatgtaatatagaatcgaatactgggctttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6279657 793 - 8369475 gtgttttttaccatggagacggaagatataaatatggaatgggaaaggtgagaaagaaccctgtggtgctgaatgtaaatagatggtatgcgtatggactcattttttaaaaactggttatttcctagctctgttcgtagaaaggacctagaaacaatggaaaccccgtagcaagggacacatgtagactcagctcttagtgtctaaataccactccccactaaaaggaacaa-ggcccattgaaaaacaaaggaaaagacatacttttttcatataaaaatgcctgctaataagtagaagcagtggta---------gataaagaaaattgccattttctaatctcagtataataattagcgaggattatcattagatgctgaagtcactgggtgaaaggtattaggacagcatgttaaggtggtcttaaagtatcatcccacaatttacaaagggggaaaaatgtacccttgtaacacagacatctggtggttacca-cttcatcgagtgctcaagtttagcattgccatgaacaattatgtgtctcctgttgtgatgattggggtggggg-gcaaaacataatatcacctttatggggttcttgctgaaaatgcagaatctaattttgaagaaatgggcttatatatccagaaggtgggttgttttgcgagacagttatccacactcttcaaaagattcaatattacaaagaatggagagaggcagcagaactgctttaggctggcaaagactgaagagacataacatccaaatgtaatatagaatcgaatactgggctttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63874051 792 - 106955855 gtg-tttttaccatggagaaggaagatataaatatgaaatgggaaaggtgagaaagaaccctgtggtgctgaatgtaaatagatggtatgagtatggactcatttattaaaaactggttatttcctagctctgttcatagaaaggacctagaaacaatggaaaccccgtagcaaagaacacatgtagactcagcttttagtttctaaataccactccccactaaaaggaacaagggcctattgaaaaacaaaggaaaagacatacttttttcacataaaaatgcctgctaataagtagaaggagtggta---------gataaagaaaattgccattttctaatctcagtataataattagcgaggattatcattagatgctgaagtcattgggtgaaaggtgttagggcaggatattaaggtgatcttaaagtatcatcccacaatttacaaaggggg---aatgtacccttgtaacacagacatctagtggttaccaacttcgtcaagtgctcaagtttagcattgccttaagcaattatgtgtctcctgatgtgatgattggggtgggggtgcaaaacataatatcacctttgtggggttcttgctgaaaatgcagaatctagttttgaagaaatgggcttatatatccagaaggtgggttgttttgcaagacagttatccacacttttcaaaagattcaatattacaaagaatggagagaggcagcagaactgttttaggctggcaaagactgaagagacataacatccaaatataatacagaatcgaatcctgggctttt i nomLeu3.chr10 C 0 C 0 s macNem1.NW_012011689v1 4503705 796 - 13342542 gtg-tttttaccatggagaagggagatataaatatggaatgggaaaggtgagaaagaaccctgtgatgctgaatgtaaatagatggtatgagtatggacccattttttaaaaactggtgagttcctagctctgttcatagaaaggacctagaaacaatggaaacccagtagcaaagaacacatgtagactc-------agtttctaaataccactccccactaaaaggaaccagggcccattgaaaaaCAaaggaaaagatctacttttttcacataaagatgtctgctaattagtagaaggagtggtaaataaaattgataaagaaaattgccattttctaatctcagtataatagttagtaaggattatcattacatgttgaagtcattgggtgaaaggtgttaggacaggatattaagatgatcttaaagtatcatcccacagtttacaaagggggaaaaatgtacccttgtaacacagacatctggtggttaccaacttcgtcaagtgctcaagtttagcattgccataaacaattatgtgtctcctgttgcgattattggggtggggg-gcaaaacatagtatcacttttgtggggttcttgctgaatatgcagaatctaattttgaagaaatgggcatatatatccagaaggtgggttgttttgcaagacagttttccacactcttcaaaagattcaatattacaaagaatggagagaggcagcagaactgttttaggctggcaaagactgaagagacataacatccaaatgtaatatggaatcgaatcctgggctttt i macNem1.NW_012011689v1 I 1038 C 0 s cerAty1.NW_012005268v1 5434270 796 + 7714307 gtg-tttttaccatggagaagggagatataaatatggaatgggaaaggtgagaaagaaccctgtgatgctgaatgtaaatagatggtatgagtatggacccatttttaaaaaactggttatttcctagctctgttcatagaaaggacctagaaacaatggaaacccagtagcaaagaacacatgtagactc-------agtatctaaataccactccccactaaaaggaaccagggcccactgaaaaaCAaaggaaaagatctacttttttcacataaagatgtctgctaataagtagaaggagtggtaaataaaattgataaagaaaattgccattttctaacctcagtataatagttagcaaggattatcattagatgttgaagtcactgggtgaaaggtgttaggacaggatattaagatggtcttaaagtatcatcccacagtttacaaagggggaaaaatgtacccttgtaacacagacatctggtggttaccagcttcgccaagtgctcaagtttagcattgccataaacaattatgtgtctcctgttgtgattattggggtggggg-gcaaaacgtaatatcacttttgtggggttcttgctgaatatgcagaatctaattttgaagaaatgggcatatatatccagaaggtgggttgttttgcaagacagttatccacactcttcaaaagattcaatattacaaagaatggagagaggcagcagaactgttttaggctggcaaagactgaagaaacataacatccaaatgtaatatggaatcgaatcctgggcttgt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29241427 792 + 50890351 gtg-tttttaccatggagaagggagatataaatatggaatgggaagggtgagaaagaaccctgtgatgctgaatgtaaatagatggtatgagtatggacccattttttaaaaactggttatctcctagctctgttcatagaaaggacctagaaacaatggaaacccagtagcaaagaacacatgtagactc-------agtttctaaataccactccccactaaaaggaaccagggcgcattgaaaaaCAaaggaaaagatctacttttttcacataaagatatctgctaataagtagaaggagtggtaaataaaattgataaagaaaattgccattttctaatctcagtataa----tagcaaggattatcattagatgttgaagtcattgggtgaaaggtgttaggacaggatattaagatggtcttaaagtatcatcccacagtttacaaagggggaaaaatgtacccttgtaacacagacatctggtggttaccaacttcgtcaagtgctcaagtttagcattgccataaacaattatgtgtctcctgttgcgattattggggtggggg-gcaaaacataatatcacttttgtggggttcttgctgaatatgcagaatctaatattgaagaaatgggcatatatatccagaaggtgggttgttttgcaagacagttatccacactcttcaaaagattcaatattacaaagaatggagagaggcagcagaactgttttaggctggcaaacactgaagagacataacatccaaatgtaatatggaatcgaatcctggGCTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 865064 796 - 2385121 gtg-tttttaccatggagaagggagatataaatatggaatgggaaaggtgagaaagaaccctgtgatgctgaatgtaaatagatggtatgagtatggacccatttttttaaaactggtgagttcctaggtctgttcatagaaaggacctagaaacaatggaaacccagtagcaaagaacacatgtagactc-------agtttctaaataccactccccactaaaaggaaccagggcccattgaaaaaCAaaggaaaagatctacttttttcacataaagatgtctgctaataagtagaaggagtggtaaataaaattgataaagaaaattgccattttctaatctcagtataatagttagcaaggattatcattagatgttgaagtcattaggtgaaaggtattaggacaggatattaagatgatcttaaagtatcatcccacagtttacaaagggggaaaaatgtacccttgtaacacagacatctggtggttaccaacttcgtcaagtgctcaagtttagcattgccataaacaattatgtgtctcctgttgcgattattggggtggggg-gcaaaacataatatcacttttgtggggttcttgctgaatatgcagaatctaattttgaagaaatgggcatatatatccagaaggtgggttgttttgcaagacagttatccacactcttcaaaagattcaatattacaaagaatggagagaggcagcagaactgttttaggctggcaaagactgaagagacataacatccaaatgtaatatagaatcgaatcctgggctttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2301328 787 + 4274983 gtg-tttttaccgtggagaagggagatataaatatggaatgggaaaggtgagaaagaaccctgtgatgctgaatgtaaatagatggtatgagtatggacccattttttaaaaactggttatttcctagctctgttcatagaaaggacctagaaacaatggaaacccagtagcaaagaacacatgtagactc-------agtttctaaataccactccccactaaaaggaaccaaggcccattgaaaaacaaaggagaagacctacttttttcagataaagatgtctgctaataagtagaaggagcggta---------gataaagaaaattgccattttctaatctcagtataatagttagcaaggattatcattagatgttgaagtcattgggtgaaaggtgttaggacaggatattaagatggtcttaaagtatcatcccacagtttacaaaggggggaaaatgtacccttgtaacacagacgtctggtggttaccaacttcgtcaagtgctcaagtttagcattgccataaacaattatgtgtctcctgttgcgattattggggtggggg-gcaaaccataatatcacttttgtggggttcttgctgaatatgcagaatctaattttgaagaaatgggcatatatatccagaaggtgagttgttttgcaagacagttatccacactcttcaaaagattcaatattacaaagaatggagagaagcagcagaactgttttaggctggcaaagactgaagagacataacatccaaatgtaatatggaatcgaatcctgggctttt i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289328 2531 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e macFas5.chr19 34635247 2550 + 59248254 I e rheMac8.chr19 30182312 1644 + 53671032 I a score=936837.000000 s hg38.chr19_GL383574v1_alt 48040 167 + 155864 aaaaagttggcgtgtttgtttcctgcaggggagaaaaagaaaactt----aaaaagttggtgtgaagaacattttagggactactaaggaacttttgagtatggactaattgttggattttgttattattgttaattttctggttaatcatatgggaaagtgtttttgttt s panTro5.chr19 36116661 167 + 61309027 aaaaagttggcgtgtttgtttcctgcaggggagaaaaagaaaactt----aaaaagttggtgtgaagaacattttagggactactaaggaacttttgagtatggactaattgttggattttgttattactgttaattttctggttaatcatatgggaaagtgtttttgttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39862628 167 + 64411610 aaaaagttggcgtgtttgtttcctgcaggggagaaaaagaaaactt----aaaaagttggtgtgaagaacattttagggactactaaggaacttttgagtatggactaattgttgcattttgttattactgttaattttctggttaatcatatgggaaagtgtttttgttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6280450 167 - 8369475 aaaaagttggcgtgtttgtttcctgcaggggagaaaaagaaaactt----aaaaagttggtgtgaagaacattttagggactactaaggaacttttgagtatggactaattgttggattttgttattactgttaattttctggttaatcatatgggaaagtgtttttgttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63874843 167 - 106955855 aaaaagttggcgtgtttgtttcctgcaggggagaaaaagaaaactt----aaaaagttggtgtgaagaacattttagggactattaaggaacttttgagtatggactaatcgttggatgttgttattactgttaattttctggttaatcatatgggagagtgtttttgttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30183956 171 + 53671032 aaaaagttggcgtgtttgtttcctgcaggagagaaaaagaaaacttaaagaaaaagttggtgtgaagaacattttagggactgctaaggaacttttgagtatggactaattgttggatgttgttattactgttcattttctggttaatcataggggagagtgtttttgttt i rheMac8.chr19 I 1644 C 0 s macFas5.chr19 34637797 171 + 59248254 aaaaaGTTGGCGTGTTTGTTTCCTGCAGGGGAGAAAAAGAAAACTTAAAGAAAAAGTTGGTGTGAAGAACATTTTAGGGACTGCTAAGGAACTTTTGAGTATGGACTAATTGTTGGATGTTGTTATTACTGTTCATTTTCTGGTTAATCATAGGGGAGAGTGTTTTTGTTT i macFas5.chr19 I 2550 C 0 s macNem1.NW_012011689v1 4504501 171 - 13342542 aaaaagttggcgtgtttgtttcctgcaggggagaaaaagaaaacttaaagaaaaagttggtgtgaagaacattttagggactgctaaggaacttttgagtatggactaattgttggatgttgttattactgttcattttctggttaatcatatgggagagtgtttttgttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5435066 171 + 7714307 aaaaagttggcgtgtttgtttcctgcaggggagaaaaagaaaacttaaagaaaaagttggtgtgaagaacattttagggactgctaaggaacttttgagtatggactaattgttggatgttgttattactgttcattttctggttaatcatatgggagagtgtttttgttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29242219 171 + 50890351 AAAAAGTTGGCATGTTTGTTTCCTGCAGGGGAGAAAAAGAAAACTTAAAGAAAAAGttggtgtgaagaacattttagggactgctaaggaacttttgagtgtggactaattgttggatgttgttattactgttcattttctggttaatcatatgggagagtgtttttgttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 865860 171 - 2385121 aaaaagttggcgtgtttgtttcctgcaggggagaaaaagaaaacttaaagaaaaagttggtgtgaagaaccttttagggactgctaaggaacttttgagtatggactaattgttggatgttgttattactgttcattttctggttaatcatatgggagagtgtttttgttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2302115 153 + 4274983 aaaaagttggcgtgtttgtttcctgcaggggagaaaaagaaaacttaaagaaaaggttggtgtgaagaacattttagggactgctaagtccct---------------aaagttggatgttgttat---tgttcattttctggttcatcatataggagagtgtttttgttt i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e dasNov3.JH563638 289328 2531 + 643850 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I a score=807857.000000 s hg38.chr19_GL383574v1_alt 48207 132 + 155864 gggggaggtggttttgaagtatttaaaagtaaaagggccaaattgattttagcctctctaaacaaaagaaaaatgtgtatattaaggtataaagatggagaaacagagtgggtttggttagatgttaacagt s panTro5.chr19 36116828 132 + 61309027 gggggaggtggttttgaagtatttaaaagtaaaagggccaaattgattttagcctctctaaacaaaagaaaaatgtgcatattaaggtataaagatggagaaacagagtgggtttggttagatgttaacagt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39862795 132 + 64411610 gggggaggtggttttgaagtatttaaaagtaaaagggccaaattgattttagcctctctaaacaaaagaaaaatgtgcatattaaggtataaagatggagaaacagagtgggtttggttagatgttaacagt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6280617 132 - 8369475 gggggaggtggttttgaagtatttaaaagtaaaagggccaaattgattttagcctctctaaacaaaagaaaaatgtgcatattaaggtataaagatggagaaacagagtgggtttggttagatgttaacagt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63875010 129 - 106955855 gggggaggtggttttgaagtatttagaagt-aaagggccagattgattttagcctctctaaacaaaagaaaaatgtgcatattaaggtataaagatggagaaac--agtgggtttggttagatgttagcagt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30184127 131 + 53671032 gggggaggtggttttgaagtatttaaaagt-aaagaaccaaattgattttagcctctctaaacaaaagaaaaatgtgcatattaaggtataaagatggagaagcagagtgggtttggttagatgttagcagt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34637968 131 + 59248254 GGGGGAGGTGGTTTTGAAGTATTTAAAAGT-AAAGAACCAAATTGATTTTAGCCTCTCTAAACAAAAGAAAAATGTGCATATTAAGGTATAAAGATGGAGAAGCAGAGTGggtttggttagatgttagcagt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4504672 130 - 13342542 gggggaggtggttttgaagtatttaaaa-t-aaagaaccacattgattttagcctctctaaacaaaagaaaaatgtgcatattaaggtataaagatggagaagcagagtgggtttggttagatgttagcagt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5435237 131 + 7714307 gggggaggtggttttgaagtatttaaaagt-aaagaaccaaattgattttagcctctctaaacaaaagaaaaatgtgcgtattaaggtataaagatggagaagcagagtgggtttggttagatgttagcagt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29242390 131 + 50890351 gggggaggtggttttgaagtatttaaaagt-aaagaaccaaattgattttagcctctctaaacaaaagaaaaatgtgcatattaaggtataaagatggagaagcagtgtgggtttggttagatgttagcagt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 866031 131 - 2385121 gggggaggtgattttgaagtatttaaaagt-aaagaaccaaattgattttagcctctctaaacaaaagaaaaatgtgcatatcaaggtataaagatggagaagcagagtgggtttggttagatgttagcagt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2302268 131 + 4274983 gggggaggtggttttgaagtatttaaaagt-aaagaaccaaattgattttagcctctcttaacaaaagaaaaatgtgcatatgaaggtataaagatggagaagcagagtgggtttggttagaagttagcagt i colAng1.NW_012111697v1 C 0 C 0 s dasNov3.JH563638 291859 126 + 643850 gggggagatgg-tttgacctatgtaagtgt-gaaggggcaaattga-tatagcctactttggcaaaagagaa--gtatatattgagatgtaaa-atggggaattggagtaggaatggcaagatgttaacagt i dasNov3.JH563638 I 2531 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e otoGar3.GL873654 5452315 1859 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I a score=657636.000000 s hg38.chr19_GL383574v1_alt 48339 95 + 155864 tgatgagtctaggtgaggaatatattgatattctgtgtactccttcaattttaacataggtttgacatttttcataattaaaaA----------TTA--ATTCCTTT s panTro5.chr19 36116960 95 + 61309027 tgatgagtctaggtgaggaatatattgatattctgtatactccttcaattttaacataggtttgacatttttcataattaaaaA----------TTA--ATTCCTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39862927 94 + 64411610 tgatgagtctaggtgaggaatatattgatattctgtatactccttcaattttaacataggtttgacatttttcataatt-aaaa----------TTA--ATTCCTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6280749 95 - 8369475 tgatgagtctaggtgaggaatatattgatattctgtgtactccttcaattttaacataggtttgacatttttcataatTGAAAA----------TTA--ATTCCTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63875139 95 - 106955855 tgatgagtctaggtgaggaatatattgatattctgtgtactccttcaattttaacataggtttgacatttttcataattaaaaA----------TTA--ATTCCTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30184258 95 + 53671032 tgatgaatctaggtgaggaatatattgatattctctgtactccttcaattttaacataggtttgacatttttcagaattaaaaA----------TTA--ATTCCTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34638099 95 + 59248254 tgatgaatctaggtgaggaatatattgatattctctgtactccttcaattttaacataggtttgacatttttcagaattaaaaa----------tta--aTTCCTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4504802 95 - 13342542 tgatgaatctaggtgaggaatatattgatattctctgtactccttcaattttaacataggtttgacatttttcagaattaaaaA----------TTA--ATTCCTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5435368 95 + 7714307 tgatgaatctaggtgaggaatatattgatattctctgtactccttcaattttaacataggtttgacatttttcataattaaaaA----------TTA--ATTCCTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29242521 92 + 50890351 tgatgaatctaggtgaggaatatattgatattctctgtactc---caattttaacataggtttgacatttttcagaattaaaaA----------TTA--ATTCCTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 866162 95 - 2385121 tgatgaatctaggtgaggaatatattgatattctctgtactccttcaattttaacataggtttgacatttttcagaattaaaaA----------TTA--ATTCCTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2302399 95 + 4274983 tgatgaatctaggtgaagaatatattgatattctgtgtactccttcaattttaacataagtttgacatttttgagaattaaaaA----------TTA--ATTCCTTT i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5454174 102 + 5549422 TAATTAGTCTAAACTAAACATATATTGCTATTCCATGTATACGTTCAATTTTAACATAGattt---atttttcaaaattaaaaactttaaatattta--attccttt i otoGar3.GL873654 I 1859 C 0 s dasNov3.JH563638 291985 100 + 643850 ttgtaagtctagatgaagaatatatgggtatttggtgtattcttttagtttttacataggtttgatatttttccaaattaaaaaGTT-------TTAATATTCCTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3940694 2529 - 30143674 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I a score=701247.000000 s hg38.chr19_GL383574v1_alt 48434 98 + 155864 TAGACTTACTT-----TAGGTGAAATAG----TGTAACTTTGGTCCATAAATTTCCAAATCC------AGTAGTAAGATCAATGTTATTTATTCATGTTAAATCAAGATATAC-- s panTro5.chr19 36117055 98 + 61309027 TAGACTTACTT-----TAGGTGAAATAG----TGTAACTTTGGTCCATAAATTTCCAAATCC------AGTAGTAAGATCAATGTTATTTATTCATGTTAAATCAAGATATAC-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863021 98 + 64411610 TAGACTTACTT-----TAGGTGAAATAG----TGTAACTTTGGTCCATAAATTTCCAAATCC------AGTAGTAAGATCAATGTTATTTGTTCATGTTAAATCAAGATATAC-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6280844 98 - 8369475 TAGACTTACTT-----TAGGTGAAATAG----TGTAACTTTGGTCCATAAATTTCCAAATCC------AGTAGTAAGATCAATGTTATTTATTCATGTTAAATCAAGATATAC-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63875234 98 - 106955855 TAGACTTATTT-----TAGGTGAAATAG----TGTAACTTTGGTCCATAAATTTCCAAATCC------AGTGGTAAGATCAATGTTAGTTATTCATGTTAAATCAAGATATAC-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30184353 94 + 53671032 TAGACTTATTT-----TAGGTGAAATAG----TGTAACTTTGGTCCATAAATTTCCAAATCC------AGTAGTAAGATCAATGTTA----TTCATGTTAAATCAAGATATAC-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34638194 94 + 59248254 TAGACTTATTT-----TAGGTGAAATAG----TGTAACTTTGGTCCATAAATTTCCAAATCC------AGTAGTAAGATCAATGTTA----TTCATGTTAAATCAAGATATAC-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4504897 94 - 13342542 TAGACTTATTT-----TAGGAGAAATAG----TGTAACTTTGGTCCATAAATTTCCAAATCC------AGTAGTAAGATCAATGTTA----TTCATGTTAAATCAAGATATAC-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5435463 94 + 7714307 TAGACTTATTT-----TAGGTGAAATAG----TGTAACTTTGGTCCATAAATTTCCAAATCC------AGTAGTAAGATCAATGTTA----TTCATGTTAAATCAAGATATAC-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29242613 94 + 50890351 TAGACTTATTT-----TAGGTGAAATAG----TGTAACTTTGGTCCATAAATTTCCAAATCC------AGTAGTAAGATCAATGTTA----TTCATATTAAATCAAGATATAC-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 866257 94 - 2385121 TAGACTTATTT-----TAGGTGAAATAG----TGTAACTTTGGTCCATAAATTTCCAAATCC------AGTAGTAAGATCAATGTTA----TTCATGTTAAATCAAGATATAC-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2302494 94 + 4274983 TAGACTTATTT-----TAGGTGAAATAG----TGTAACTTTGGTCCATAAATTCCCAAATCC------AGTAGTAAGATCAATGTTA----CTCATGTTAAATCAAGATATAT-- i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3943223 104 - 30143674 TAGACTTACTT-----TAGGTGAAATAG----TATAACTTTGGTCCATAAATCTCCTAATCCTGTTCAAGTAGTAAGTTCAACGTTATTTATACATGTTAAATCAAGATATAC-- i micMur3.chr22 I 2529 I 379 s otoGar3.GL873654 5454276 100 + 5549422 tatatttattt-----ta-GTGAAATTGAC--TGCAATTTTGGTTCATAAATCTAATATGTTCATCTAGGTAGGTAGTT----GTTA-AGATACATGTTAATTGAAGATATAC-- i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 292085 114 + 643850 TAGGCTTATTCTTGGATAGGTGAAACAGGCAGTATAATTTTGGAACATGTATTTCCTAATGCTATTGAAGTAATAAGACCAATGTTAATTATATATGTTAA-CCAAGATATATGC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I a score=19785.000000 s hg38.chr19_GL383574v1_alt 48532 4 + 155864 TGTA s panTro5.chr19 36117153 4 + 61309027 TGTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863119 4 + 64411610 TGTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6280942 4 - 8369475 TGTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63875332 4 - 106955855 TGTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30184447 4 + 53671032 TGTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34638288 4 + 59248254 TGTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4504991 4 - 13342542 TGTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5435557 4 + 7714307 TGTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29242707 4 + 50890351 TGTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 866351 4 - 2385121 TGTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2302588 4 + 4274983 TGTA i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5454376 3 + 5549422 -CTA i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 292199 4 + 643850 CCTA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3943327 379 - 30143674 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4592957 934 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I a score=110376.000000 s hg38.chr19_GL383574v1_alt 48536 13 + 155864 TGTTAACTGTAAC s panTro5.chr19 36117157 13 + 61309027 TGTTAACTATAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863123 13 + 64411610 TGTTAACTATAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6280946 13 - 8369475 TGTTAACTATAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63875336 13 - 106955855 TGTTAACTATAAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30184451 13 + 53671032 TGTTAACTATAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34638292 13 + 59248254 TGTTAACTATAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4504995 13 - 13342542 TGTTAACTATAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5435561 13 + 7714307 TGTTAACTATAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29242711 13 + 50890351 TGTTAACTATAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 866355 13 - 2385121 TGTTAACTATAAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2302592 13 + 4274983 TGTTAACTATAAC i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5454379 13 + 5549422 TGCTAGCTATTAC i otoGar3.GL873654 C 0 I 6 s canFam3.chr1 4593891 13 - 122678785 TGTTAGCTGTAAC i canFam3.chr1 I 934 I 2 s dasNov3.JH563638 292203 13 + 643850 TGTTAGCCTTAAC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3943327 379 - 30143674 I e mm10.chr7 111070496 1963 - 145441459 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I a score=2020067.000000 s hg38.chr19_GL383574v1_alt 48549 249 + 155864 --TTAGAATCCTTTCCTGGGGATTCAAGTAAGGAATGATTGCAAATTGTATTATCCTTTTTGAGGCTCCTTTGACTAAATTAAATAGTTAACTGACTTTGAGATCATCATTATACTT----CTTATGTTACCATGAAGTTTATGTAACTAATTATG-TTAAAAA-ATTTGAACAGGATCAAGCACGTAGTATCTATATAGTAACTATTGCTTCTGCCA-TTCTTCAAGGTTTA-CTT-TTTAATC-AGAGTATTTTGTGGT s panTro5.chr19 36117170 249 + 61309027 --TTAGAATCCTTTCCTGGGGATTCAAGTAAGGAATGATTGCAAATTGTATTATCCTTTTTGAGGCTCCTTTGACTAAATTACATAGTTAACTGACTTTGAGATCATCATTATACTT----CTTGTGTTACCATGAAGTTTATGTAACTAATTATG-TTCAGAA-ATTTGAACAGGATCAAGCACGTAGTATCTGTATAGTAACTATTGCTTCTGCCA-TTCTTCAAGGTTTA-CTT-TCTAATC-AGAGTATTTTGTCGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863136 249 + 64411610 --TTAGAATCCTTTCCTGGGGATTCAAGTAAGGAATGATTGCAAATTGTATTATCCTTTTTGAGGCTCCTTTGACTAAATTACATAGTTAACTGACTTTGAGATCATCATTATACTT----CTTGTGTTACCATGAAGTTTATGTAACTAATTATG-TTCAGAA-ATTTGAACAGGATCAAGCACGTAGTATCTGTATAGTAACTATTGCTTCTGCCA-TTCTTCAAGGTTTA-CTT-TCTAATC-AGAGTATTTTGTCGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6280959 249 - 8369475 --TTAGAATCCTTTCCTGGGGATTCAAGTAAGGAATGATTGCAAATTGTATTATCCTTTTTGAGGCTCCTTTGACTAAATTAAATAGTTAACTGACTTTGAGATCATCATTATACTT----CTTATGTTACCATGAAGTTTATGTAACTAATTATG-TTCAAAA-ATTTGAACAGAATCAAGCACGTAGAATCTATATAGTAACTATTGCTTCTGCCA-TTCTTCAAGGTTTA-CTT-TCTAATC-AGAGTATTTTGTGGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63875349 249 - 106955855 --TTAGAATCCTTTCCTGGAGATTCAAATAAGGAATGATTGCAAATTGTATTATCCTTTTTGAGGCTCCTTTGACTAAATTAAATAGTTAACTGACTTTGAGATCATCATTATACTT----CTTATGTTACCATGAAGTTTATGTAAGTAATTATG-TTCAAAA-ATTTGAACAGGATCAACCACGTAGTATCTATATAGTAACTATTGCTTCTGCCA-TTCTTCAAGGTTTA-CTC-TCTAATC-AGAGTATTTTGTGGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30184464 249 + 53671032 --TTAGAATCCTTTCTTGGGGATTCAAATAAGGAATGATTGCAAATTGTATTATCCTTTTTGAGGCTTCTTTGACTAAATTAAATAGTTAACTGACTTTGAGATCATCATTGTACTT----CTTATGTTACCATGAAGTTTATGTAACTAATTATG-TTCAAAA-ATTTGAGCAGGATCAAGCACATAGTATCTATATAGTAACTACTGCTTCTGCCA-TTCTTCAAGGTTTA-CTC-TCTAGTC-AGAGTATTTTGTGGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34638305 249 + 59248254 --TTAGAATCCTTTCTTGGGGATTCAAATAAGGAATGATTGCAAATTGTATTATCCTTTTTGAGGCTTCTTTGACTAAATTAAATAGTTAACTGACTTTGAGATCATCATTGTACTT----CTTATGTTACCATGAAGTTTATGTAACTAATTATG-TTCAAAA-ATTTGAGCAGGATCAAGCACATAGTATCTATATAGTAACTACTGCTTCTGCCA-TTCTTCAAGGTTTA-CTC-TCTAGTC-AGAGTATTTTGTGGT i macFas5.chr19 C 0 I 392 s macNem1.NW_012011689v1 4505008 249 - 13342542 --TTAGAATCCTTTCTTGGGGATTCAAATAAGGAATGATTGCAAATTGTATTATCCTTTTTGAGGCTTCTTTGACTAAATTAAATAGTTAACTGACTTTGAGATCATCATTGTACTT----CTTATGTTACCATGAAGTTTATGTAACTAATTATG-TTCAAAA-ATTTGAGCAGGATCAAGCACATAGTATCTATATAGTAACTACTGCTTCTGCCA-TTCTTCAAGGTTTA-CTC-TCTAGTC-AGAGTATTTTGTGGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5435574 249 + 7714307 --TTAGAATCCTTTCCTGGGGATTCAAATAAGGAATGATTGCAAATTGTATTATCCTTTTTGAGGCTTCTTTGACTAAATTAAATAGTTAACTGATTTTGAGATCATCATTGTACTT----CTTATGTTACCATGAAGTTTATGTAACTAATTATG-TTCAAAA-ATTTGAGCAGGATCAAGCACGTAGTATCTATATAGTAACTACTGCTTCTGCCA-TTCTTCAAGGTTTA-CTC-TCTAGTC-AGAGTATTTTGTGGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29242724 249 + 50890351 --TTAGAATCCTTTCCTGGGGATTCAAATAAGGAATGATTGCAAATTGTATTATCCTTTTTGAGGCTTCTTTGACTAAATTAAATAGTTAACTGACTTTGAGATCATCATTGTACTT----CTTATGTTACCATGAAGTTTATGTAACTAATTATG-TTCAAAA-ATTTGAGCAGGATCAAGCACATAGTATCTATATAGTAACTACTGCTTCTGCCA-TTCTTCAAGGTTTA-CTC-TCTAGTC-AGAGTATTTTGTGGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 866368 249 - 2385121 --TTAGAGTCCTTTCCTGGGGATTCAAATAAGGAATGATTGCAAATTGTATTATCCTTTTTGAGGCTTCTTTGACTAAATTAAATAGTTAACTGACTTTGAGATCATCATTGTACTT----CTTATGTTACCATGAAGTTTATGTAACTAATTATG-TTCAAAA-ATTTGAGCAGGATCAAGCACATAGTATCTATATAGTAACTACTGCTTCTGCCA-TTCTTCAAGGTTTA-CTC-TCTAGTC-AGAGTATTTTGTGGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2302605 250 + 4274983 --TTAGAATCCTTTCCTGGGGATTCAAATAAGGAATGATTGCAAATTGTATTATCCTTTTTGAGGCTGCTTTGACTAAATTAAATAGTTAACTGACTTTGAGATCATCATTGTACTT----CTTATGTTACCATGAAGTTGATGTAACTAATTATG-TTCAAAA-ATTTGAGCAGGATCAAGCACATAGTATCTATATCGTAACTACTGCTTCTGCCA-TTCTTCAAAGTTTA-CTC-TCTAGTCAAGATTATTTTGTGGT i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3943706 249 - 30143674 --TTAAAATCCTTTCCTGAGTATTCAAATATGAGATGATTGCAAATTATATTATCCTTTTTGAGAC-TCTTTTAGTAAATTAAATAGTTGACTAACATTTGAATCATTATTGTACTT----ACTTAAGTACCATGAAGTTTGTATGACTTAATCTA-TATAAAG-ATTTGAACAGGATCTAGCATATACTACCTAGGTAGTAACTACTGTTTCTGCCA-TTCTTCATGGTCTGTGCC-TCTAATC-AGAGTATTTTGTGGT i micMur3.chr22 I 379 C 0 s otoGar3.GL873654 5454398 226 + 5549422 --CTAAA------TCCTGAGGATTCAAATATGGGATGGATGTAAATTATATTATCCTTTTTGCGACTTCTTTCACTGAATT-AATAGTTGACTAACACTGGAGTCATTATTGCATTT-----CTATGTTACTGTGAAGTTTATATGACT-----TG-TATAGAG-ATTTGAAC---ATCTAGCACAT--------GATAGTAACTATTCCTTCGGCCATTTTTTTAAGGTCTGGCCC-TTTACTC-ACAGT-TTTTCTGGT i otoGar3.GL873654 I 6 C 0 s canFam3.chr1 4593906 244 - 122678785 --TTAGTATCCTATTCTAAGGGTTTAAATGAGGGAC-ATTGTAAATTAT------CCTTTTGAGACTCCTTTCACTAAATTGAATAGTTGGCtaacattgagattattactgtacttacttcatacattactgtgaagtttgcatgacttaacaggttttaaga-attacaatagggtctagcacatagtGT-TACATAGTAAATACTGTTTCTGCCA-TTCTTCAGAGCCTG-CTCTTCTAACC-AGAGTATCTATT--- i canFam3.chr1 I 2 C 0 s dasNov3.JH563638 292216 248 + 643850 TGTCAGAATCCTATC-TAAGAATTCAAATAAGAGGTGATTGCAAATTAG------CCTTTTGGGATTCCTTTCACTAAATTGAATAGTTGGCtaacattgggatggttattgtacttacctcttatgagactgtgaagtttacatgac--agtatg-tgtaaaacgtttaaacaggttctggcacatagtaTCTATATAGTTGCTACTGTTTCTACCA-TTCTTCAGGTTCAAAGTA-TTTTATA-AATTAATTTTGTGGT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e mm10.chr7 111070496 1963 - 145441459 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I a score=81373.000000 s hg38.chr19_GL383574v1_alt 48798 14 + 155864 TGTGAAATGC-TTTT--- s panTro5.chr19 36117419 14 + 61309027 TGTGAAATGC-TTTT--- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863385 14 + 64411610 TGTGAAATGC-TTTT--- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281208 14 - 8369475 TGTGAAATGC-TTTT--- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63875598 15 - 106955855 TGTGAAATGCTTTTT--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30184713 14 + 53671032 TGTGAAATGC-tttt--- i rheMac8.chr19 C 0 I 319 s macFas5.chr19 34638946 14 + 59248254 TGTGAAATGC-TTTT--- i macFas5.chr19 I 392 I 1 s macNem1.NW_012011689v1 4505257 14 - 13342542 TGTGAAATGC-TTTT--- i macNem1.NW_012011689v1 C 0 I 477 s cerAty1.NW_012005268v1 5435823 14 + 7714307 TGTGAAATGC-tttt--- i cerAty1.NW_012005268v1 C 0 I 320 s chlSab2.chr6 29242973 14 + 50890351 TGTGAAATGC-tttt--- i chlSab2.chr6 C 0 I 312 s manLeu1.NW_012102454v1 866617 14 - 2385121 TGTGAAATGC-tttt--- i manLeu1.NW_012102454v1 C 0 I 329 s colAng1.NW_012111697v1 2302855 14 + 4274983 TGTGAAATGC-TTTT--- i colAng1.NW_012111697v1 C 0 I 1 s micMur3.chr22 3943955 4 - 30143674 AGTG-------------- i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5454624 14 + 5549422 CGTGAAATGT-TTTT--- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4594150 4 - 122678785 -----------TCTT--- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 292464 17 + 643850 TGTGAAATAT-ATTCCTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e mm10.chr7 111070496 1963 - 145441459 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I a score=757978.000000 s hg38.chr19_GL383574v1_alt 48812 112 + 155864 ATAAATATTTTAATCTAATTTTAATATTATTGTGGGTTGTTGGTT---TATTACTTGGGTGTCACAAAAGTAGAAGATTTTACTGGCATTTTCCATGTCAGTAGAGTAA-TTTTTG s panTro5.chr19 36117433 112 + 61309027 ATAAATATTTTAATCTAATTTTAATATTATTGTGGGTTGTTGGTT---TATTACTTGGGTGTCACAAAAGTAGAAGATTTTACTGGCATTTTCCATGTCAGTAGAGTAA-TTTTTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863399 112 + 64411610 ATAAATATTTTAATCTAATTTTAATATTATTGTGGGTTGTTGGTT---TATTACTTGGGTGTCACAAAAGTAGAAGATTTTACTGGCATTTTCCATGTCAGTAGAGTAA-TTTTTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281222 113 - 8369475 ATAAATATTTTAATCTAATTTTAATATTATTGTGGGTTGTTGGTT---TATTACTTGGGTGTCACAAAAGTAGAAGATTTTACTGGCATTTTCCATGTCAGTAGAGTAATTTTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63875613 112 - 106955855 ATAAATATTTTAATCTAATTTTAATATTATTGTGCGTTGTTAGTT---TATTACTTGGGTGTCACAAAAGTAGAAGGTTTTACTGGTGTTTTCCATGTCAGTAGAATAA-TTTTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30185046 112 + 53671032 ATAAATATTTTGATCTAATTTTAATATTATTGTGGGTTGTTGTTT---TATTATTTGGATGTCACAAAAGTAGAAGATTTTACTGGTGTTTTCCATGTCAGTAGAATAA-TTTGTG i rheMac8.chr19 I 319 C 0 s macFas5.chr19 34638961 112 + 59248254 ATAAATATTTTGATCTAATTTTAATATTATTGTGGGTTGTTGTTT---TATTATTTGGATGTCACAAAAGTAGAAGATTTTACTGGTGTTTTCCATGTCAGTAGAATAA-TTTGTG i macFas5.chr19 I 1 C 0 s cerAty1.NW_012005268v1 5436157 112 + 7714307 ATAAATATTTTAATCTAATTTTAATATTATTGTGGGTTGTTGTTT---TATTATTTGGGTGTCACAAAAGTAGAAGATTTTACTGGTGTTTTCCATGTCAGTAGAATAA-TTTGTG i cerAty1.NW_012005268v1 I 320 C 0 s chlSab2.chr6 29243299 112 + 50890351 ATAAATATTTTAATCTAATTTTAATATTATTGTGGGTTGTTGTTT---TATTATTTGGGTGTCACAAAAGTAGAAGATTTTTCTGGTGTTTTCCATGTCAGTAGAATAA-TTTGTG i chlSab2.chr6 I 312 C 0 s manLeu1.NW_012102454v1 866960 112 - 2385121 ATAAATATTTTGATCTAATTTTAATATTATTGTGGGTGGTTGTTT---TATTATTTGGGTGTCACAAAAGTAGAAGATTTTACTGGTGTTTTCCATGTCAGTAGAATAA-TTTGTG i manLeu1.NW_012102454v1 I 329 C 0 s colAng1.NW_012111697v1 2302870 109 + 4274983 ATAAATATTTTAATCTAATTTTAATATTATTGTGGGTTGTTGTTT---TATTATTTGGGTGTCACAAAAGTAGAAGATTTTACTGGTATTTTCCATGTC---AGAATAA-TTTGTG i colAng1.NW_012111697v1 I 1 C 0 s micMur3.chr22 3943959 108 - 30143674 --AAGTGCTTTTATCTAATTTCAGTATTATTATGGGTTGTTGTCT---TATTCTTTGGATGTCAC--CAGTAGAGGAGTTTACTGGTATTTTCCATGTCAGTAGACTAA-TTTTTG i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5454638 106 + 5549422 ATAAATGCTTTTATCTAACTTCAGTATTATTGCTGGTT----TAT---TGTTCTTTGGATATCAA--CAGTAGAGGGTTTTGCTGGTGTTTTCCATGTCAGTAGAATGA-TTTTTG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4594154 104 - 122678785 ATAAATGTTTTTATCTAATTTTAATATTATTGGGAATTGCTAGTTAACTGTTCTTT-----------AGGCAGAGGGTTTTGTTTGTATTTTCTGTGTCAGTTGAGTAG-CTTTTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 292481 89 + 643850 GTAAATGCTTTTATCTAATTTTACTATTA--ACTGGTTGCTGGTT---TAATGTTC---------------------TTTTACTTAATTTATCCATGTTGGCAAAATAA-TTTTTG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e mm10.chr7 111070496 1963 - 145441459 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e macNem1.NW_012011689v1 4505271 477 - 13342542 I a score=729790.000000 s hg38.chr19_GL383574v1_alt 48924 88 + 155864 CAGGGTCAGA-TTATTTTTGATTAATT-GATTTCCATATTGGTTAGG-ATAATTTGTGGAGTGG-CTAATTAGAAAACT-AGTG-----T------TAGAAGTT s panTro5.chr19 36117545 89 + 61309027 CAGGGTCAGA-TTATTTTTGATTAATT-GATTTCCATATTGGTTAGG-ATAATTTGTGGAGTGG-CTAATTAGAAAACTAAGTG-----T------TAGAAGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863511 89 + 64411610 CAGGGTCAGA-TTATTTTTGATTAATT-GATTTCCATATTGGTTAGG-ATAATTTGTGGAGTGG-CTAATTAGAAAACTAAGTG-----T------TAGAAGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281335 89 - 8369475 TAGGGTCAGA-TTATTTTTGATTAATT-GATTTCCATATTGGTTAGG-ATAATTTGTGGAGTGG-CTAATTAGAAAACTAAGTG-----T------TAGAAGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63875725 89 - 106955855 CAGGGTCAGG-TTATTTTTGATTAATT-GATTTCCATAGTGGTTAGG-ATAATTTATGAAGTGG-CTAATTAGAAAACTAAGTG-----T------TAGAAGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30185158 89 + 53671032 CAGGGTCAGA-TTATTTTTGATTAATT-GATTTCCATATTGGTTAGG-ATAATTTGTGAAGTGG-CTAATTAGAAAACTAAGTG-----T------TACAAGTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639073 89 + 59248254 CAGGGTCAGA-TTATTTTTGATTAATT-GATTTCCATATTGGTTAGG-ATAATTTGTGAAGTGG-CTAATTAGAAAACTAAGTG-----T------TACAAGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4505748 91 - 13342542 CAGGGTCAGACTTATTTTTGATTAATTGGATTTCCATATTGGTTAGGAATAATTTGTGAAGTGGCCTAATTAGAAAACTAAGTT-----T--------CAAGTT i macNem1.NW_012011689v1 I 477 C 0 s cerAty1.NW_012005268v1 5436269 89 + 7714307 CAGGGTCAGA-TTATTTTTGATTAATT-GATTTCCATATTGGTTAGG-ATAATTTGTGGAGTGC-CTAATTAGAAAACTAAGTG-----T------TACAAGTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29243411 89 + 50890351 CAGGGTCAGA-TTATTTTTGATTAATT-GATTTCCATATTGGTTAGG-ATAATTTGTGGAGTGG-CTAATTAGAAAACTAAGTG-----T------TACAAGTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867072 89 - 2385121 CAGGGTCAGA-TTATTTTTGATTAATT-GATTTCCATATTGGTTAGG-ATAATTTGTGGAGTGG-CTAATTAGAAAACTAAGTG-----T------TACAAGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2302979 89 + 4274983 CAGGGTCAGA-TTATTTTTGATTAATT-GATTTCCATATTGGTTAGG-ATAATTTGTGGAGTGG-CTAATTAGAAAACTAAGTG-----T------TACAAGTT i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3944067 84 - 30143674 CAGTGTCAG----ATTTTTGATTGATT-GATTTTCATACTGGTTAGG-ATAATTTATGGAGTGG-CTAATTAGAAAAC--TATG-----T------TAGAAGTT i micMur3.chr22 C 0 I 1180 s otoGar3.GL873654 5454744 89 + 5549422 CAGTGTCAGA-TTATTTTTGATTGATT-GCTTTCCATACTGGTTAGG-ATAATTTGTGGAGTGA-CTAATTACAAAACCATATA-----T------TAGAAGTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4594258 90 - 122678785 TAGTAGAAGA-TTATTTTTCATTTGTT-GATTTCCATATTGG-TAAG-ATAATTTGTGGAGTGA-C----TAGAGAGCTATATA-----TAATATTTAGAAGTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 292570 93 + 643850 CAGTTGTATA-TTATTTTTGTTTGTTT-GATTTCTGTGTTGGTCAA--CTAGTTGGTGGATTAG-CTAATTAGAAAACCATATACCTACT------TAGAAATT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e mm10.chr7 111070496 1963 - 145441459 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I a score=5190.000000 s hg38.chr19_GL383574v1_alt 49012 1 + 155864 A s panTro5.chr19 36117634 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863600 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281424 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63875814 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30185247 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639162 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4505839 1 - 13342542 A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5436358 1 + 7714307 A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29243500 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867161 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303068 1 + 4274983 A i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5454833 1 + 5549422 G i otoGar3.GL873654 C 0 I 660 s canFam3.chr1 4594348 1 - 122678785 G i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 292663 1 + 643850 G i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e mm10.chr7 111070496 1963 - 145441459 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I a score=374588.000000 s hg38.chr19_GL383574v1_alt 49013 53 + 155864 CCAAAT---GAGGAAGAGGAAAGCTGTGGCATTG----GTCAAGGTGACAGATGTTTTTC s panTro5.chr19 36117635 53 + 61309027 CCAAAT---GAGGAAGAGGAAAGCTGTGGCATTG----GTCAGGGTAACAGATGTTTTTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863601 53 + 64411610 CCAAAT---GAGGAAGAGGAAAGCTGTGGCATTG----GTCAGGGTAACAGATGTTTTTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281425 53 - 8369475 CCAAAT---GAGGAAGAGGAAAGCTGTGGCATTG----GTCAAGGTGACAGGTGTTTTTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63875815 53 - 106955855 CCAAAT---GAGGAAGAGGAAAGCTGTGGCATTG----GTCAAGGTGACAGATGTTTTTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30185248 53 + 53671032 CCAAAT---CAGGAAGAGGAAAGCTGTGGCATTG----GTCAAGGTGACAGATGTTTTTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639163 53 + 59248254 CCAAAT---CAGGAAGAGGAAAGCTGTGGCATTG----GTCAAGGTGACAGATGTTTTTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4505840 53 - 13342542 CCCAAA---TAGGAAGAGAGAAGCTGTGGCATTG----GTCCAGGTGACAGATGTTTTTC i macNem1.NW_012011689v1 C 0 I 595 s cerAty1.NW_012005268v1 5436359 53 + 7714307 CCAAAT---CAGGAAGAGGAAAGCTGTGGCATTG----GTCAAGGTGACAGATGTTTTTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29243501 53 + 50890351 CCAAAT---CAGGAAGAGGAAAGCTGTGGCATTG----GTCAAGGTGACAGATGTTTTTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867162 53 - 2385121 CCAGAT---CAGGAAGAGGAAAGCTGTGGCATTG----GTCAAGGTGACAGATGTTTTTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303069 53 + 4274983 CCAAAT---GTGGAAGAGGAAAGCTGTGGCATTG----GTCAAGGTGACAGATGTTTTTC i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5455494 57 + 5549422 CCACAT---GAAAAGGGCGAAAACTATAGCAAGGTTATATCAAGGTTTCACATGATGTTT i otoGar3.GL873654 I 660 C 0 s canFam3.chr1 4594349 56 - 122678785 TTAAATGAGGAGGAGGAGGAAAATTGGAGCATTG----ACTAAGGTAGTAGGTGTTTTTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 292664 59 + 643850 TTGAATGAGTAGGAGGAAGAAAGTTGTAATATTATTC-ATCAAGGTAGCAGATGTTTTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e mm10.chr7 111070496 1963 - 145441459 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I a score=116402.000000 s hg38.chr19_GL383574v1_alt 49066 16 + 155864 AGAAAAGGAATTAACT s panTro5.chr19 36117688 16 + 61309027 AGAAAAGGAATTAACT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863654 16 + 64411610 AGAAAAGGAATTAACT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281478 16 - 8369475 AGAAAAGGAATTAACT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63875868 16 - 106955855 AGAAAAGGAATTAACT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30185301 16 + 53671032 AGAAAAGGAATTAACT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639216 16 + 59248254 AGAAAAGGAATTAACT i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5436412 16 + 7714307 AGAAAAGGAATTAACT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29243554 16 + 50890351 AGAAAAGGAATTAACT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867215 16 - 2385121 AGAAAAGGAATTAACT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303122 16 + 4274983 AGAAAAGGAATTAACT i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5455551 16 + 5549422 AGAAAAGGAATTAACT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4594405 15 - 122678785 AGAAAAGGAGAAACC- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 292723 16 + 643850 AGAAAAGGAATTTACT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e mm10.chr7 111070496 1963 - 145441459 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e macNem1.NW_012011689v1 4505893 595 - 13342542 I a score=91010.000000 s hg38.chr19_GL383574v1_alt 49082 17 + 155864 TAAATTTAGCTTGtttt s panTro5.chr19 36117704 17 + 61309027 TAAATTTAGCTTGtttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863670 17 + 64411610 TAAATTTAGCTTGtttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281494 17 - 8369475 TAAATTTAGCTTGtttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63875884 17 - 106955855 TAAATTTAGCTTGtttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30185317 17 + 53671032 CAAATTTAGCTTGGttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639232 17 + 59248254 CAAATTTAGCTTGGttt i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5436428 17 + 7714307 CAAATTTAGCTTGGttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29243570 17 + 50890351 CAAATTTAGCTTGGttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867231 17 - 2385121 CAAGTTTAGCTTGGttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303138 17 + 4274983 CAAATTTAGCTTGGttt i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4594420 17 - 122678785 CAGATATGGTTTGTGTT i canFam3.chr1 C 0 I 355 s dasNov3.JH563638 292739 17 + 643850 TGTATATAGTTTGTTTT i dasNov3.JH563638 C 0 I 378 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e otoGar3.GL873654 5455567 0 + 5549422 C e mm10.chr7 111070496 1963 - 145441459 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e macNem1.NW_012011689v1 4505893 595 - 13342542 I a score=970134.000000 s hg38.chr19_GL383574v1_alt 49099 207 + 155864 ttgagatggcgtcttgctctgtcacccaggctagagtgcagtggtgcgatctcagctcactgcagccccctcctcccgggttcaagcgagtctcctgcctcagcctcctgagtagctgcggttacaagcatgtgccaccacgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggtcaggctggtctcaaa s panTro5.chr19 36117721 207 + 61309027 ttgagatggcgtcttgctctgtcatccaggctagagtgcagtggtgcgatctcagctcactgcagccccctcctcccaggttcaagcgagtctcctgcctcggcctcctgagtagctggggttacaggcatgcgccaccacgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggtcaggctggtctcaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863687 207 + 64411610 ttgagatggcgtcttgctctgtcatccaggctagagtgcagtggtgcgatctcagctcactgcagccccctcctcccaggttcaagcgagtcttctgcctcagcctcctgagtagctggggttacaggcatgcgccaccacgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggtcaggctggtctcaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281511 207 - 8369475 ttgagatggcgtcttgctctgtcacccaggctagagtgcagtggtgcaatctcagctcactgcagccccctcctcccgggttcaagcgagtctcctgcctcagcctcctgagtagctggggttacaggcatgcgccaccacgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggtcaggctggtctcaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63875901 199 - 106955855 ttgagatggcatcttgctctgtcacc--ggctagagtgcagtggtgcgatctcagctcactgcaacctcctcctcccgggttcaagcgagtgtcctgcctcagcctcctgaatagctggggttaca------cgccaccacacccagctaatttttgtatttttagtagagacagggtttcaccatgttggtcaggctggtctcaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30185334 207 + 53671032 ttgagacgacgtcttgctctgtctcccaggctagagtgcagtggtgtgatctcggctcactgcaacctcctcctcccagattcaagcgactctcctgcctcagcctcctgagtagctgggattacaggcatgcaccaccacacctggctaatttttgtattttcagtagagacagggtttcacctcgttggtcaggctggtctcaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639249 207 + 59248254 ttgagacgacgtcttgctctgtctcccaggctagagtgcagtggtgtgatctcggctcactgcaacctcctcctcccagattcaagctactctcctgcctcagcctcctgagtagctgggattacaggcatgcaccaccacacctggctaatttttgtattttcagtagagacagggtttcacctcgttggtcaggctggtctcaaa i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5436445 207 + 7714307 ttgagacgacgtcttgctctgtctcccaggctagagtgcagtggtgtgatctcggctcactgcaacctcctcctcccagattcaagcgactctcctgcgtcagcctcctgagtagctgggattacaggcatgcaccaccacacctggctaatttttgtattttcagtagagacagggtttcaccttgttggtcaggctggtctcaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29243587 207 + 50890351 ttgagacgacatcttgctctgtctcccaggctagagtgcagtggtgtgatctcggctcactgcatcctcctcctcccagattcaagcgactctcctgcctcagcctcctgagtagctgggattacaggcatgcaccaccacacctggctaatttttgtattttcagtagagacagggtttcaccttgttggtcaggctggtctcaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867248 207 - 2385121 ttgagacgacgtcttgctctgtctcccaggctagagtgcagtggtgtgatctcggctcactgcaacctcctcctcccagattcaagcgactctcctgcctcagcctcctgagtagctgggattacaggcatgcaccaccacacctggctaatttttgtattttcagtagagacagggtttcacctcgttggtcaggctggtctcaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303155 207 + 4274983 ttgagacgacatcttgctgtgtctcccaggctagagtgcagtggtgtgatctcggctcactgcaacctcctcctcccggattcaagcgactctcctgcctcagcctcctgagtagctgggattacaggcatacaccaccacacccggctaatttttgtattctcagtagagacagggtttcaccttgttggtcaggctggtctcaaa i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e otoGar3.GL873654 5455567 0 + 5549422 C e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4594437 355 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e macNem1.NW_012011689v1 4505893 595 - 13342542 I a score=279290.000000 s hg38.chr19_GL383574v1_alt 49306 74 + 155864 ctcctgacctcttgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccatgcccagc s panTro5.chr19 36117928 74 + 61309027 ctcctgacctcttgatccgcccgcctcagcctaccaaagtgctgggattacaggcgtgagccaccatgcccagc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863894 74 + 64411610 ctcctgacctcttgatccgcccgcctcagcctaccaaagtgctgggattacaggcgtgagccaccatgcccagc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281718 73 - 8369475 ctcctgacctcttgatccgcccgcctcagcctcccaaagtgct-ggattacaggcgtgagccaccatgcccagc i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30185541 74 + 53671032 atcctgacctcgtgatccgcccacctcagcctcccaaagtaccaggattacaggtgtgagccaccgtgcccagc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639456 74 + 59248254 atcctgacctcgtgatccgcccacctcagcctcccaaagtaccaggattacaggtgtgagccaccgtgcccagc i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5436652 74 + 7714307 atcctgacctcgtgatctgcccacctcagcctcccaaagtaccaggattacaggtgtgagccaccgtgcccggc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29243794 74 + 50890351 atcctgacctcgtgatccgcccacctcagcctcccaaagtaccaggattacaggtgtgagccaccgtgcccggc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867455 74 - 2385121 atcctgacctcgtgatccgcccacctcagcctcccaaagtaccaggattacaggtgtgagccaccgtgcccggc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303362 74 + 4274983 ctcctgacctcgtgatccgcccacctcagcctcccaaagtgccagggttacaggtgtgagccaccgtgccctgc i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e otoGar3.GL873654 5455567 0 + 5549422 C e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4594437 355 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e macNem1.NW_012011689v1 4505893 595 - 13342542 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=116440.000000 s hg38.chr19_GL383574v1_alt 49380 24 + 155864 cAAATTTAGCTTTTGTTGGCACAA s panTro5.chr19 36118002 24 + 61309027 cAAATTTAGCTTTTGTTGGCACAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863968 24 + 64411610 cAAATTTAGCTTTTGTTGGCACAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281791 24 - 8369475 cAAATTTAGCTTTTGTTGGCACAA i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30185615 24 + 53671032 cAAATTTAGCTTTTGTTGGCACAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639530 24 + 59248254 cAAATTTAGCTTTTGTTGGCACAA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5436726 24 + 7714307 cAAATTTAGCTTTTGTTGGCACAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29243868 24 + 50890351 cAAATTTAGCTTTTGTTGGCACAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867529 24 - 2385121 cAAATTTAGCTTTTGTTGGCACAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303436 24 + 4274983 cAAATTTAGCTTTTGTTGGCACAA i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5455567 24 + 5549422 CAAATATAGTTTGTGTTGTCACAA i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4594437 355 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e saiBol1.JH378197 5378459 1467 + 8899380 I e calJac3.chr22 28533913 1128 + 49145316 I e macNem1.NW_012011689v1 4505893 595 - 13342542 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=23177.000000 s hg38.chr19_GL383574v1_alt 49404 4 + 155864 AGTA s panTro5.chr19 36118026 4 + 61309027 AGTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863992 4 + 64411610 AGTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281815 4 - 8369475 AGTA i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30185639 4 + 53671032 AGTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639554 4 + 59248254 AGTA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5436750 4 + 7714307 AGTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29243892 4 + 50890351 AGTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867553 4 - 2385121 AGTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303460 4 + 4274983 AGTA i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5379926 4 + 8899380 AATA i saiBol1.JH378197 I 1467 C 0 s otoGar3.GL873654 5455591 4 + 5549422 AGTA i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4594437 355 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e calJac3.chr22 28533913 1128 + 49145316 I e macNem1.NW_012011689v1 4505893 595 - 13342542 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=29268.000000 s hg38.chr19_GL383574v1_alt 49408 7 + 155864 AACCACA s panTro5.chr19 36118030 7 + 61309027 AACCACA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39863996 7 + 64411610 AACCACA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281819 7 - 8369475 AACCACA i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30185643 7 + 53671032 AACCAGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639558 7 + 59248254 AACCAGA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5436754 7 + 7714307 AACCAGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29243896 7 + 50890351 AACCAGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867557 7 - 2385121 AACCAGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303464 7 + 4274983 GACCAGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28535041 7 + 49145316 AACCAGA i calJac3.chr22 I 1128 C 0 s saiBol1.JH378197 5379930 7 + 8899380 AACCAGA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5455595 3 + 5549422 AGT---- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4594437 355 - 122678785 I e aotNan1.NW_018505377v1 339714 1133 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e macNem1.NW_012011689v1 4505893 595 - 13342542 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=239690.000000 s hg38.chr19_GL383574v1_alt 49415 33 + 155864 TTTTAAGCTAGGCCTCTTTTCATTTTTGGTTCC s panTro5.chr19 36118037 33 + 61309027 TTTTAAGCTAGGCCTCTTTTCATTTTTGATTCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39864003 33 + 64411610 TTTTAAGCTAGGCCTCTTTTCATTTTTGATTCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281826 33 - 8369475 TTTTAAGCTAGGCCTCTTTTCATTTTTGGTTCC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30185650 33 + 53671032 TTTTAAGCTAGGCCTCTTTTCATTTTTGGTTCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639565 33 + 59248254 TTTTAAGCTAGGCCTCTTTTCATTTTTGGTTCC i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5436761 33 + 7714307 TTTTAAGCTAGGCCTCTTTTCATTTTTGGTTCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29243903 33 + 50890351 TTTTAAGCTAGGCCTCTTTTCATTTTTGGTTCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867564 33 - 2385121 TTTTAAGCTAGGCCTCTTTTCATTTTTGGTTCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303471 33 + 4274983 TTTTAAGCTAGGCCTCTTTTCATTTTTGGTTCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28535048 33 + 49145316 TTTTAAGCTAGGCCTTTTTTCATTTTTGGTCCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5379937 33 + 8899380 TTTTAAGCTAGGCCTCTTTTCATTTTTGGTCCC i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 340847 32 - 4471408 TTTTAAGCTAGGCCTCTTTT-ATTTTTGGTCCC i aotNan1.NW_018505377v1 I 1133 C 0 s otoGar3.GL873654 5455598 19 + 5549422 --------------TTTTTTCATTGTTGGTCCC i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4594437 355 - 122678785 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e macNem1.NW_012011689v1 4505893 595 - 13342542 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=285782.000000 s hg38.chr19_GL383574v1_alt 49448 35 + 155864 TAGTATTCTGATTTTAAAAGGAAATTTAAATGAAT s panTro5.chr19 36118070 35 + 61309027 TAGTATTCTGATTTTAAAAGGAAATGTAAATGAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39864036 35 + 64411610 TAGTATTCTGATTTTAAAAGGAAATGTAAATGAAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281859 35 - 8369475 TAGTATTCTGATTTTAAAAGGAAATTTAAATGAAT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30185683 35 + 53671032 TAGTATTCTGATTTTAAAAGGAAATTTAAATGAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639598 35 + 59248254 TAGTATTCTGATTTTAAAAGGAAATTTAAATGAAT i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5436794 35 + 7714307 TAGTATTCTGATTTTAAAAGGAAATTTAAATGAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29243936 35 + 50890351 TAGTATTCTGATTTTAAAAGGAAATTTAAATGAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867597 35 - 2385121 TAGTATTCTGATTTTAAAAGGAAATTTAAATGAAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303504 35 + 4274983 TAGTATTCTGATTTTAAAAGGAAATTTAAATGAAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28535081 35 + 49145316 TAGTATTCTGATTTTAAAAGAAATTGAAAATGAAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5379970 35 + 8899380 TAGTATTCTGATTTTAAACGGAAATGTAAATGAAT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 340879 35 - 4471408 TAGTATTCTGATTTTAAAATGAAATGTAAATGAAT i aotNan1.NW_018505377v1 C 0 I 875 s otoGar3.GL873654 5455617 34 + 5549422 TA-TATTCTGATTTTAAAAGAAAGTTTAAATGAAT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4594792 34 - 122678785 taATATTCTGACTTAAAAAGGAAGTTTAAATCAG- i canFam3.chr1 I 355 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e mm10.chr7 111070496 1963 - 145441459 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e macNem1.NW_012011689v1 4505893 595 - 13342542 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=149883.000000 s hg38.chr19_GL383574v1_alt 49483 25 + 155864 CTGGATCACAGT-ATTGCTATTTGAT s panTro5.chr19 36118105 25 + 61309027 CTGGATCACAGT-ATTGCTATTTGAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39864071 25 + 64411610 CTGGATCACAGT-ATTGCTATTTGAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281894 25 - 8369475 CTGGATCACAGT-ATTGCTATTTGAT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30185718 25 + 53671032 CTGGATCACACT-ATTGCTATTTGAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639633 25 + 59248254 CTGGATCACACT-ATTGCTATTTGAT i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5436829 25 + 7714307 CTGGATCACACT-ATTGCTATTTGAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29243971 25 + 50890351 CTGGATCACACT-ATTGCTATTTGAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867632 25 - 2385121 CTGGATCACACT-ATTGCTATTTGAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303539 26 + 4274983 CTGGATCACACTAATTGCTATTTGAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28535116 24 + 49145316 -CAGGTCACGCT-ATTGCTATTTGAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5380005 24 + 8899380 -CAGGTCACACT-ATTGCTATTTGAT i saiBol1.JH378197 C 0 I 335 s otoGar3.GL873654 5455651 25 + 5549422 CAGAATTACACT-GTTGCTATTTGAT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4594826 19 - 122678785 ---GGAAACACT---TGCTATTTTA- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e mm10.chr7 111070496 1963 - 145441459 I e aotNan1.NW_018505377v1 340914 875 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e macNem1.NW_012011689v1 4505893 595 - 13342542 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=300997.000000 s hg38.chr19_GL383574v1_alt 49508 72 + 155864 GAGAAAATTTTTATATATTTACGTTTTCGTGTGTTA-----TTACTAT-TGCtttttatttttatttatttattt----------ttt s panTro5.chr19 36118130 72 + 61309027 GAGAAAATTTTTATATATTTACGTTTTCATGTGTTA-----TTACTAT-TGCtttttatttttatttatttattt----------ttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39864096 72 + 64411610 GAGAAAATTTTTATATATTTACGTTTTCATGTGTTA-----TTACTAT-TGCtttttatttttatttatttattt----------ttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281919 72 - 8369475 GAGAAAATTTTTATATATTTACGTTTTCGTGTGTTA-----TTAGTAT-TGCtttttatttttatttatttattt----------ttt i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30185743 65 + 53671032 GAGAAAA-TTTTATATGTTTACATTTTC--GTGTTA-----TTACTAT-TGCtttttatt----tttatttattt----------ttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639658 65 + 59248254 GAGAAAA-TTTTATATGTTTACATTTTC--GTGTTA-----TTACTAT-TGCtttttatt----tttatttattt----------ttt i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5436854 59 + 7714307 GAGAAAA-TTTTATATGTTTACATTTTC--ATGTTA-----TTACTAT-TGC------tt----tttatttattt----------ttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29243996 65 + 50890351 GATAAAA-TTTTATATGTTTACATTTTT--GTGTTA-----TTACTAT-TGCtttttatt----tttatttattt----------ctt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867657 65 - 2385121 GAGAAAA-TTTTATATGTTTACATTTTC--GTGTTA-----TTACTAT-TGCtttttatt----tttatttattt----------ttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303565 67 + 4274983 GAGAAAA-TTTTATATGTTTACATTTTCATGTGTTA-----TTACTAT-TGCtttttatt----tttatttattt----------ttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28535140 80 + 49145316 GAGAAAATTTT--TATGTTTACATTGTCATGTGTTA-----TTACTTT-TGCTTTTAATTTTTATCTATTTACTTATTTATGTAtttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5380364 76 + 8899380 GAGAAAATTTTTATATGTTTACATTTTCATGTGTTA-----CTACTTT-TGCTTTTAAtttttattta-ttatttattta-----ttt i saiBol1.JH378197 I 335 C 0 s otoGar3.GL873654 5455676 54 + 5549422 --GGGAA-TTTTTTTCTTTCACATTTAA-------A-----CTTTTATATACtttttatt---------cttttt----------ttt i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4594845 77 - 122678785 GGGAAAAATTTTCTCCATTTTAGTGTTTATATATTATAGTCTTTTTAT-AGGttttttttttttttttttttttt----------ttt i canFam3.chr1 C 0 I 347 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e mm10.chr7 111070496 1963 - 145441459 I e aotNan1.NW_018505377v1 340914 875 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e macNem1.NW_012011689v1 4505893 595 - 13342542 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=297099.000000 s hg38.chr19_GL383574v1_alt 49580 58 + 155864 gagacagggtctctttctgtcatccaggctggagtacagtggcacaaccacaggtcgc s panTro5.chr19 36118202 58 + 61309027 gagacagggtctctttctgtcatccaggctggagtacagtggcacaaccacgggtcgc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39864168 58 + 64411610 gagacagggtctctttctgtcatccaggctggagtacagtggcacaaccacgggtcgc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6281991 58 - 8369475 gagacagggtctctttctgtcatccaggctggagtacagtggcacaaccacgggtcgc i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30185808 58 + 53671032 gagacagggtctcgttctgtcacctaggctggagttcagtggcacaaccatggctcac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639723 58 + 59248254 gagacagggtctcgttctgtcacctaggctggagttcagtggcacaaccatggctcac i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5436913 58 + 7714307 gagacagggtcccgttctgtcacccaggctggagttcagtggcacaaccatggctcac i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29244061 58 + 50890351 gagacagggtctcgttctatcacccagactggagttcagtggcacagccatggctcac i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867722 58 - 2385121 gagacagggtctcgttctgtcacctaggctggagttcagtggcacaaccatggctcac i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303632 58 + 4274983 gagacaaggtctcggtctgtcacccacgctggagtacagtggcacaaccatggctcac i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28535220 57 + 49145316 gagacagggtctcattctgtca-ccaggctggagtacagtggcacaacgacagctcac i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5380440 57 + 8899380 gagacagggtctcattctgtca-ccaggctggagtacagtggcacaaccacagctcac i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5455730 31 + 5549422 gagata--gtctccctttatcgccctcgataga------------------------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4594922 347 - 122678785 I e aotNan1.NW_018505377v1 340914 875 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e macNem1.NW_012011689v1 4505893 595 - 13342542 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=672373.000000 s hg38.chr19_GL383574v1_alt 49638 96 + 155864 tgcagcctagacctcctgggctcaagcagtcctcccatctcaacctccctagtagctggga-------ctacaggcatgtgccatcatgcccagctaattttt s panTro5.chr19 36118260 96 + 61309027 tgcagcctagaccttctgggctcaagcagtcctctcgtctcaacctccctagtagctggga-------ctacaggcatatgccatcatgcccagctaattttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39864226 93 + 64411610 tgcagcctagac---ctgggctcaagcagtcctctcgtctcaacctccctagtagctggga-------ctacaggcatatgccatcatgcccagctaattttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6282049 96 - 8369475 tgcagcctagacctcctgggctcaagcagtcctcccatctcaacctccctagtagctggga-------ctacaggcatgtgccatcatgcccagctaattttt i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30185866 96 + 53671032 tgcagcctagacctcctgggctcaagcagtcctcccacctcaacctccctggtagctggga-------ctacagtcatgtgccatcatacctggctaattttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639781 96 + 59248254 tgcagcctagacctcctgggctcaagcagtcctcccacctcaacctccctggtagctggga-------ctacagtcatgtgccatcatacctggctaattttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4506488 96 - 13342542 tgcagcctagacctcctgggctcaagcagtcctcccacctcaacctccctggtagctggga-------ctacaggcatgtgccatcatacctggctaattttt i macNem1.NW_012011689v1 I 595 C 0 s cerAty1.NW_012005268v1 5436971 96 + 7714307 tgcagcctagacctcctgggctcaagcagtcctcccacctcaacctccctggtagctggga-------ctacaggcatgtgccatcatacctggctaattttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29244119 96 + 50890351 tgcagcctagacctcctgggctcaagcagtcctcccacctcaacctccctggtagctggga-------ctacaggcatgtgccatcatacctggctaattttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867780 96 - 2385121 tgcagcctagacctcctgggctcaagcagtcctcccacctcaacctccctggtagctggga-------ctacaggcatgtgccatcatacctggctaattttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303690 103 + 4274983 tgcagcctagacctcctgggctcaagcagtcctcccacctcaacctccctggtagctgggactggtacctggtagcatatgccatcatgcctggctaattttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28535277 96 + 49145316 tgcagcctagacctcctgtgctcaagcaatccttccacctcaaccagcctggcagctgtga-------ctataggcacatgccctcatgcctggctaattttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5380497 96 + 8899380 tgcagcctagacttcctgggctcaagcagtccttccatctcaaccagcctggcagctggga-------ctacaggcatatgcccttatgccttgctgattttt i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5455761 90 + 5549422 ------ctcaaactcttaggcttaagcgattctcttgcctcagcctcccaagtagctggga-------ctacaggcacctaccacaacggctggctgtttttt i otoGar3.GL873654 C 0 I 178 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4594922 347 - 122678785 I e aotNan1.NW_018505377v1 340914 875 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=813609.000000 s hg38.chr19_GL383574v1_alt 49734 126 + 155864 gta-tttttggtaaacacagcatctcagcatgttatccaggctgatctcgaactcctgggttcagt----ctgcctgcctccgcctcccaaagtgttgggaACCACCATGCCCACCCTTATTATTGCTTTT s panTro5.chr19 36118356 126 + 61309027 gta-tttttggtaaacacagcatctcagcatgttatccaggctgatctcgaactcctgggttcagt----ctgcctgcctccacctcccaaagtgttgggaACCACCATGCCCACCCTTATTATTGCTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39864319 126 + 64411610 gta-tttttggtaaacacagcatctcagcatgttatccaggctgatctcgaactcctgggttcagt----ctgcctgcctccgcctcccaaagtgttgggaACCACCATGCCCACCCTTATTATTGCTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6282145 126 - 8369475 gta-tttttggtaaacacagcatctcagcatgttatccaggctgatctcgaactcctgggttcagt----ctgcctgcctccgcctcccaaagtgttgggaACCACCATGCCCACCCTTATTATTGCTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30185962 126 + 53671032 gta-ttttttgtaaagacagcatttcagcatgttatccaggctgatcttgaactcctgggctcagt----ctgcctgcctccgcctcccaaagtgttgggaACCACCATGCCCACCCTTATTATTGCtttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34639877 126 + 59248254 gta-ttttttgtaaagacagcatttcagcatgttatccaggctgatcttgaactcctgggctcagt----ctgcctgcctccgcctcccaaagtgttgggaACCACCATGCCCACCCTTATTATTGCTTTT i macFas5.chr19 C 0 I 115 s macNem1.NW_012011689v1 4506584 126 - 13342542 gta-ttttttgtaaagacagcatttcagcatgttatccaggctgatcttgaactcctgggctcagt----ctgcctgcctccgcctcccaaagtgttgggaACCACCATGCCCACCCTTATTATTGCTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5437067 126 + 7714307 gta-ttttttgtaaagacagcatttcagcatgttatccaggctgatcttgaactcctgggctcagt----ctgcctgcctctgcctcccaaagtgttgggaACCACCATGCCCCCCCTTATTATTGCTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29244215 126 + 50890351 gta-ttttttgtaaagacagcatttcagcatgttatccaggctgatcttgaactcctgggctcagt----ctgcctgcctccgcctcccaaagtgttgggaACCACCATGCCCACCCTTATTATTGCTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 867876 126 - 2385121 gta-ttttttgtaaagacagcatttcagcatgttatccaggctgatcttgaactcctgggctcagt----ctgcctgcctccgcctcccaaagtgttgggaACCACCATGCCCACCCTTATTATTGCTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303793 126 + 4274983 gta-ttttttgtaaagacagcatctcagcatgttatccaggctgatcttgaactcctgggctcagt----ttgcctgcctccgcctcccaaagtgttgggaACCACCATGCCCACCCTTATTATTGCTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28535373 112 + 49145316 gtgtttttttgtagagacaacggctcagcatattatccaggctgatctcaaa------------------ctgcctgcctcagcctcccaaagtgttgggaACCACCATGCCCACCCTTATTACTGG-TTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5380593 130 + 8899380 gtg-ttttttgtagagatagcggctcagcatgttatccaggctgatctcaaactcctaggctcaaacagtctgcctgcctcagcctcccaaagtgttgggaACCAGCATGCCCACCCTTATTACTGGTTTT i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e otoGar3.GL873654 5455851 178 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4594922 347 - 122678785 I e aotNan1.NW_018505377v1 340914 875 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=77212.000000 s hg38.chr19_GL383574v1_alt 49860 26 + 155864 TAGTAAG---ttttttt------tttttttttttt s panTro5.chr19 36118482 29 + 61309027 TAGTAAGtttttttttt------tttttttttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39864445 22 + 64411610 TAGTAAg-------ttt------tttttttttttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6282271 27 - 8369475 TAGTAAG--tttttttt------tttttttttttt i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30186088 19 + 53671032 ----------ttttttt------tttttttttttt i rheMac8.chr19 C 0 I 371 s macFas5.chr19 34640118 32 + 59248254 TAATAAg---tttttttgtttggtttttttttttt i macFas5.chr19 I 115 I 4 s macNem1.NW_012011689v1 4506710 32 - 13342542 TAATAAg---tttttttgtttggtttttttttttt i macNem1.NW_012011689v1 C 0 I 4 s cerAty1.NW_012005268v1 5437193 32 + 7714307 TAATACg---tttttttgtttggtttttttttttt i cerAty1.NW_012005268v1 C 0 I 6 s chlSab2.chr6 29244341 29 + 50890351 TAATAAG---ttttttggtttgg---ttttttttt i chlSab2.chr6 C 0 I 3 s manLeu1.NW_012102454v1 868002 32 - 2385121 TAATAAg---tttttttgtttggtttttttttttt i manLeu1.NW_012102454v1 C 0 I 3 s colAng1.NW_012111697v1 2303919 26 + 4274983 TAATAAG---Gtttttt------ttttttttcatt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28535485 26 + 49145316 TAATAGG---TGTGTGt------ttgtttgtttgt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5380723 26 + 8899380 TAATAGG---TGCGTGT------GTGTGTGTGTGT i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e otoGar3.GL873654 5455851 178 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4594922 347 - 122678785 I e aotNan1.NW_018505377v1 340914 875 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=134581.000000 s hg38.chr19_GL383574v1_alt 49886 65 + 155864 CCATTTGGTTGGTTGGTTTGGTt-----tttgttttgttttgttttgttttgttttTGAGACTGAGTCCT s panTro5.chr19 36118511 65 + 61309027 ccatttggttggttggtttggtt-----tttgttttGttttgctttgttttgtttttgagactgagtcct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39864467 65 + 64411610 ccatttggttggttggtttggtt-----tttgttttgttttgctttgttttgtttttgagactgagtcct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6282298 70 - 8369475 CCATTTGGTTGGTTGGTTTGGTttttgctttgttttgttttgttttgttttgttttTGAGACTGAGTCCT i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34640154 47 + 59248254 ttgtttggttggttggtttggtt---------------tttgttttgttttgttttTGAGAC-------- i macFas5.chr19 I 4 C 0 s macNem1.NW_012011689v1 4506746 47 - 13342542 ttgtttggttggttggtttggtt---------------tttgttttgttttgttttTGAGAC-------- i macNem1.NW_012011689v1 I 4 C 0 s cerAty1.NW_012005268v1 5437231 47 + 7714307 ttgtttggttggttggtttggtt---------------tttgttttgttttgttttTGAGAC-------- i cerAty1.NW_012005268v1 I 6 C 0 s chlSab2.chr6 29244373 47 + 50890351 ttgtttgtttggttggtttggtt---------------tttgttttgttttcttttTGAGAC-------- i chlSab2.chr6 I 3 C 0 s manLeu1.NW_012102454v1 868037 47 - 2385121 ttgtttggttggttggtttggtt---------------tttgttttgttttgttttTGAGAC-------- i manLeu1.NW_012102454v1 I 3 C 0 s colAng1.NW_012111697v1 2303945 46 + 4274983 -tgtttggttggttggtttggtt---------------tttgtttcgttttgtttttGAGAC-------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28535511 19 + 49145316 -------------------------------------------------ttggttttgagac--agtctt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5380749 15 + 8899380 -----------------------------------------------------TTTCAAGAC--AGTCTT i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e otoGar3.GL873654 5455851 178 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4594922 347 - 122678785 I e aotNan1.NW_018505377v1 340914 875 - 4471408 I e cebCap1.NW_016107633v1 1589376 813 - 2680843 I e rheMac8.chr19 30186107 371 + 53671032 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=58614.000000 s hg38.chr19_GL383574v1_alt 49951 15 + 155864 GCTCTGCTGCCCAGC s panTro5.chr19 36118576 15 + 61309027 gctctgctgcccagc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39864532 15 + 64411610 gctctgctgcccagc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6282368 15 - 8369475 GGTCTGCTGCCCAGC i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34640201 13 + 59248254 --TCTGTCTCCCGGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4506793 13 - 13342542 --TCTGTCTCCCGGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5437278 13 + 7714307 --ACTGTCTCCCGGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29244420 13 + 50890351 --TCTGTCTCCCAGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 868084 13 - 2385121 --TGTGTCTCCCCGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2303991 13 + 4274983 --TCTGTTGCCCAGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28535530 15 + 49145316 gctctgttgcccagg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5380764 15 + 8899380 GCTCTGTTGCGCAGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1590189 15 - 2680843 GCTCTGTTGCCCAGG i cebCap1.NW_016107633v1 I 813 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e otoGar3.GL873654 5455851 178 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4594922 347 - 122678785 I e aotNan1.NW_018505377v1 340914 875 - 4471408 I e rheMac8.chr19 30186107 371 + 53671032 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=3235014.000000 s hg38.chr19_GL383574v1_alt 49966 453 + 155864 CTGGAGTACAAAGACGTTagcactttgggaggccatggcaggaggattgcttgagctcaggagttggagaccagcct--gggcaacatagctaaaccctggctctac--------aaaaaaaaaaaaattaggcaagcatggtggcacactcctgtaatcccagctgctccagaggctgaggtggggg---gattgcttgagcctgagaggtagaggttgcaatgaaccaagagcacgccactgcactccagcttgggaaacagagccagactgtgtctc-----------aaaaaaaaaaaaaaaaa-T---cttgcttatagtgaaaaacatacaaattaaatctacactgagacaccatttctcactatcagtttggcaaaaactcaaaagcttgattatatgcatactc--ttggcaagtatgtgaagaatatatactctcatacattgAGAAGAATAATATACCAGGTAGAATTAAAG s panTro5.chr19 36118591 453 + 61309027 ctggagtacaAAGACCTTagcactttgggaggccatggcaggaggattgcttgagctcaggagttggagaccagcct--gggcaacatagctaaaccctggctctac---a---aaaaaaaaaaaaaattaggcaagcatagtggcacactcctgtaatcccagctgctccagaggctgaggtggggg---gattgcttgagcctgagaggtagaggttgcaatgaaccaagagcatgccactgcactccagcttgggaaacagagccagactgtgtctc-------------aaaaaaaaaaaaaaa-T---cttgcttatagtgaaaaacatgcaaattaaatctacactgagacaccatttctcactatcagtttggcaaaaactcaaaagcttgattatatgcatactc--ttggcaagtatatgaagaatatatactctcatacattgAGAAGAATAATATACCAGGTAGAATTAAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39864547 466 + 64411610 ctggagtacaAAGACCTTagcactttgggaggccatggcaggaggattgcttgagctcaggagttggagaccagcct--gggcaacatagctaaaccctggctctac-------aaaaaaaaaaaaaattaggcaagcatagtggcacactcctgtaatcccagctgctccagaggctgaggtggggg---gattgcttgagcctgagaggtagaggttgcaatgaaccaagagcacgccactgcactccagcttgggaaacagagccagactgtgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaa-T--Acttgcttatagtgaaaaacatacaaattaaatctacactgagacaccatttctcactatcagtttggcaaaaactcaaaagcttgattatatgcatactc--ttggcaagtatatgaagaatatatactctcatacattgAGAAGAATAATATACCAGGTAGAATTAAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6282383 456 - 8369475 CTGGAGTACAAAGACCTTagcactttgggaggccatggcaggaggattgcttgag-tcaggagttggagaccagcct---ggcaacatagctaaaccctggctctac---a---aaaaaaaaaaaaaattaggcaagcatggtggcacactcctgtaatcccagctgcttcagaggctgaggt-gggg---gattgcttgagcctgagaggtagaggttgcaatgaaccaagagcacgccactgcactccagcttgggaaacagagccagagtgtgtctc-------aaaaaaaaaaaaaaaaaaaaG-T---cttgcttatagtgaaaaacatacaaattaaatctacactgagacaccatttctcactatcagtttggcaaaaactcaaaagcttgattatatgcatactc--ttggcaagtatgtgaagaatatatactctcatgcattgAGAAGAATAATATACCAGGTAGAATTAAAG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30186478 465 + 53671032 CTGGAGTACAAAGACCTTagcactttgggaggccatggcgggaggattgcttgagctcaggagttggagaccagcctgggggcaacatggctaaaccctatctctac---caaaaaaaaaaaaaaaaattaggcaagcatagtggcacactcctgtaatccctgctcctccagaggctgaggtgggag---gattgcttgagcctgagaggtagaggttgcagtgagccaagagcgcaccactgcactccagcttgggaaatagagccagactgtgtctc-----------aaaaaaaaaataaaaaa-TCaccttgtttatagtgaaaaacatacaaattaaatctacactaagacacgatttctcactatcagtttgacaaaaactcaaaagcttcattatatacatactcttttggcaagtctatgaagaatatatactctcatacattgAGAAGAATAATATACCAGGTAGAAATAAAG i rheMac8.chr19 I 371 I 4 s macFas5.chr19 34640214 463 + 59248254 CTGGAGTACAAAGACCTTagcactttgggaggccatggcgggaggattgcttgagctcaggagttggagaccagcctgggggcaacatggctaaaccctatctctac---c--aaaaaaaaaaaaaaattaggcaagcatagtggcacactcctgtaatccctgctcctccagaggctgaggtgggag---gattgcttgagcctgagaggtagaggttgcagtgagccaagagcgcaccactgcactccagcttgggaaatagagccagactgtgtctc-----------aaaaaacaaataaaaaa-TCaccttatttatagtgaaaaacatacaaattaaatctacactaagacacgatttctcactatcagtttgacaaaaactcaaaagcttcattatatacatactcttttggcaagtctatgaagaatatatactctcatacattgAGAAGAATAATATACCAGGTAGAAATAAAG i macFas5.chr19 C 0 I 1 s macNem1.NW_012011689v1 4506806 464 - 13342542 CTGGAGTACAAAGACCTTagcactttgggaggccatggcgggaggattgcttgagctcaggagttggagaccagcctgggggcaacatggctaaaccctatctctac---c-aaaaaaaaaaaaaaaattaggcaagcatagtggcacgctcctgtaatccctgctcctccagaggctgaggtgggag---gattgcttgagcctgagaggtagaggttgcagtgagccaagagcgcaccactgcactccagcttgggaaatagagccagactgtgtctc-----------aaaaaaaaaataaaaaa-TCaccttgtttatagtggaaaacatacaaattaaatctacactaagacacgatttctcactatcagtttgacaaaaactcaaaagcttcattatatacatactcttttggcaagtctatgaagaatatatactctcatacattgAGAAGAATAATATACCAGGTAGAAATAAAG i macNem1.NW_012011689v1 C 0 I 4 s cerAty1.NW_012005268v1 5437291 458 + 7714307 CTGGAATACAAAGACCTTagcactttgggaggccatggcaggaggattgcttgagctcaggagttggagaccagcctgggggcaacatggctaaaccctatctctac---a--------aaaaaaaaattaggcaagcatagtggcacactcctgtaatcccagctcccccagaggctgaggtgggag---gattgcttgggcctgagaggtagaggttgcagtgagccaagagcgcaccactgcactccagcttgggaaacagagccagactgtgtctc-----------aaaaaaaaaaaaaaaaaGTCaccttgtttatagtgaaaaacatacaaattaaatctacactaagacacgatttctcactatcagtttggcaaaaactcaaaagcttcattatatacatactcttttggcaagtctatgaagaatatatactctcatacattgAGAAGAATAATATACCAGGTAGAAATAAAG i cerAty1.NW_012005268v1 C 0 I 4 s chlSab2.chr6 29244433 465 + 50890351 CTGGGGTACAAAGACCTTagcactttgggaggccatggcgggaggattgcttgagctcaggagttggagaccagcctgggggcaacatggctaaaccctatctctacaaaa-aaaaaaaaaaaaaaaattaggcaagcatagtggcacactcctgtaatccctgctcctccagaggctgaggtgggag---gattgcttgagcctgagaggtagaggttgcagtgagccaagagtgcaacactgcgctccagcttgggaaacagagccagactgtgtctc-----------aaaaaaaaa--aaaaaa-tcaacttgtttatagtgaaaaacatacaaattaaatctagactaagacacgatttctcactatcagtttggcaaaaactcaaaagcttcattatatacatactcttttggcaagtctatgaagaatatatactctcatacattgAGAAGAATAATATACCAGGTAGAAATAAAG i chlSab2.chr6 C 0 I 4 s manLeu1.NW_012102454v1 868097 464 - 2385121 CTGGAGTACAAAGACCTTagcactttgggaggccatggcgggaggattgcttgagctcaggagttggagaccagcctgggggcaacatggctaaaccctatctctac---c-aaaaaaaaaaaaaaaattaggcaagcatagtggcacactcctgtaatccctgctcctccagaggctgaggtgggag---gattgcttgagcctgagaggtagaggttgcagtgagccaagagcgcaccactgcactccagcttgggaaatagagccagactgtgtctc-----------aaaaaaaaaataaaaaa-TCaccttgtttatagtgaaaaacatacaaattaaatctacactaagacacgatttctcactatcagtttggcaaaaactcaaaagcttcattatatacatattcttttggcaagtctatgaagaatatatactctcatacattgAGAAGAATAATATACCAGGTAGAAATAAAG i manLeu1.NW_012102454v1 C 0 I 4 s colAng1.NW_012111697v1 2304004 461 + 4274983 CTGGAGTACAAAGACCTTagcactttgggaggccatggtgggaggattgcttgagctcaggagttggagaccagcctgggggcaacatggctaaaccctatctctac---a-----aaaaaaaaaaaattaggcaagcatggtggcacactcctgtaatcccagctcctccagaggctgaggtgagag---gattgcttgagcctgagaggtagaggttgcagtgagccaagagcgcaccactgcactccagcttgggaaacagagccagactgtgtctc-----------aaaaaaaaaaaaaaagaaTCaccttgcttatagtgaaaaacatataaattaaatctacactaagacatgatttgtcactatcagtttggcaaaaattcaaaagcttcattatatacatactcttttggcaagtctatgaagaatatatactctcatacattgAGAAGAATAATATACCAGGTAGAAATAAAG i colAng1.NW_012111697v1 C 0 I 4 s calJac3.chr22 28535545 460 + 49145316 ctagaatgcaAAGACTccggcactttgggaggctgttg-gggagcattgcttgagctcgggagttggagatcagcct-----------ggctaaaccctgtctctac---c---aaaaaaaggggtgggggggcaagtgtggtggcaaactcctgtaatcccagctgctccagaggctgaggtgggaggatgattgtttgagcctgagagatagaggttgcagtgaaccaagatcacaccattgcactccagcttgggaaacagagccaggctgtgtctcaaaaaaaaaagaaaagaaaaagaaaaaa-TCatcttgcttgtagtgaaaaatgtacaaattaaatctacgctaagacaccatttctcgttatcagtttggcaaaaactc-aaagtttgattatatacatactcttttggcaagtctgtgaagaatatata--gtcatacgttgAAAAGAATAATATA-CAGGTAGAATTAAAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5380779 456 + 8899380 CTAGAATGCAAAGACTccagcactttgggaggctgtgg-gggagcattgcttgagctcaggagttggagactagcct-----------ggctaaaccctttctctac---c---aaaaaaaaaaaaaaaaaggcaagcatggtggcaaactcttgtaatcccagctgctccagaggctgaggtgggaggatgattgcttgagcctgagaggtagaggttgcagtgaactaagatcacaccattgcactccagcttgggaaacagagccaggctgtgtctc-------aaagaaaagaaaaagaaaaaa-TCatcttgcttatagtgaaaaatgtacaaattaaatctacactaagacaccatttttcgctatcagtttggcaaaaactc-aaagtttgattatatacatactcttttggcaagtctgtgaggaatatatactgtcatatattgAAAAAAATAATATACCAGGTAGAATTAAAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1590204 451 - 2680843 CTAGAATGCAAAGACTccagcactttgggaggctgtgg-ggtagcattgcttgagctcaggagttggagaccagcct-----------gactaaaccctgtctctac---caaaaaaaaaaaaaaaaaaaaggcaagcgtggtggcaaactcctgtaatcccagctgctccagaggctgaggtgagaggatgattgcttgagcctgagaggtggatgttgcagtgaaccaagatcacaccattgcactccagcttgggaaacagagccaggctgtgtctc----------aaaaagaaaaagaaaaaa-TCatcttgcttatagtgaaaaatgtac-----aaatctacactaaggcaccatttcttgctatcagtttggcaaaaactc-aaagtttaattatatgcatactcttttggcaagtctgtgaagaatatatactgtcatacattgAAAAGAATAATATACCAGGTAGAATTAAAG i cebCap1.NW_016107633v1 C 0 I 4 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e otoGar3.GL873654 5455851 178 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4594922 347 - 122678785 I e aotNan1.NW_018505377v1 340914 875 - 4471408 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=-2980.000000 s hg38.chr19_GL383574v1_alt 50419 1 + 155864 -G s panTro5.chr19 36119044 1 + 61309027 -G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865013 1 + 64411610 -G i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6282839 1 - 8369475 -G i gorGor5.CYUI01015150v1 C 0 C 0 s calJac3.chr22 28536005 1 + 49145316 C- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5381235 1 + 8899380 C- i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e otoGar3.GL873654 5455851 178 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29244898 4 + 50890351 I e canFam3.chr1 4594922 347 - 122678785 I e aotNan1.NW_018505377v1 340914 875 - 4471408 I e cebCap1.NW_016107633v1 1590655 4 - 2680843 I e colAng1.NW_012111697v1 2304465 4 + 4274983 I e manLeu1.NW_012102454v1 868561 4 - 2385121 I e cerAty1.NW_012005268v1 5437749 4 + 7714307 I e macNem1.NW_012011689v1 4507270 4 - 13342542 I e macFas5.chr19 34640677 1 + 59248254 I e rheMac8.chr19 30186943 4 + 53671032 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=2820.000000 s hg38.chr19_GL383574v1_alt 50420 3 + 155864 Act s panTro5.chr19 36119045 3 + 61309027 Act i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865014 3 + 64411610 Act i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6282840 3 - 8369475 Act i gorGor5.CYUI01015150v1 C 0 C 0 s calJac3.chr22 28536006 3 + 49145316 ACT i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e otoGar3.GL873654 5455851 178 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29244898 4 + 50890351 I e canFam3.chr1 4594922 347 - 122678785 I e aotNan1.NW_018505377v1 340914 875 - 4471408 I e cebCap1.NW_016107633v1 1590655 4 - 2680843 I e saiBol1.JH378197 5381236 0 + 8899380 C e colAng1.NW_012111697v1 2304465 4 + 4274983 I e manLeu1.NW_012102454v1 868561 4 - 2385121 I e cerAty1.NW_012005268v1 5437749 4 + 7714307 I e macNem1.NW_012011689v1 4507270 4 - 13342542 I e macFas5.chr19 34640677 1 + 59248254 I e rheMac8.chr19 30186943 4 + 53671032 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=107570.000000 s hg38.chr19_GL383574v1_alt 50423 199 + 155864 cactctgttgctgcccaggctggagtgcagtggcgcatctccgctcactgcaagctccacctccctggttcacgccattctcctgcctcagcctccctagtagctgggactacagacgcccgccaccacgcccgggtaattttttgta---ttttttttagtagagacggggtttcaccgtgttagccaggatggtctcgat s panTro5.chr19 36119048 202 + 61309027 cactctgttgctgcccaggctggagtgcagtggcgcatctccgctcactgcaagctccacctccctggttcacgccattctcctgcctcagcctcccgagtagctgggactacagatgcccgccaccacgcccgggtaattttttgtatttttttttttagtagaaacggggtttcaccgtgttagccaggatggtctcgat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865017 200 + 64411610 cactctgttgctgcccaggctggagtgcagtggcgcatctccgctcactgcaagctccacctccctggttcacgccattctcctgcctcagcctcccgagtagctgggactacagatgcccgccaccacgcccgggtaattttttgta--tttttttttagtagaaacggggtttcaccgtgttagccaggatggtctcgat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6282843 200 - 8369475 cactctgttgctgcccaggctggagtgcagtggcgcatctctgctcactgcaagctccacctccctggttcacgccattttcctgcctcagcctcccgagtagctgggactacagatgcccgccaccacgcccggccaatttttttta--tttttttttagtagagatgaggtttcaccgtgttagccaggatagtctcgat i gorGor5.CYUI01015150v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e otoGar3.GL873654 5455851 178 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29244898 4 + 50890351 I e canFam3.chr1 4594922 347 - 122678785 I e aotNan1.NW_018505377v1 340914 875 - 4471408 I e cebCap1.NW_016107633v1 1590655 4 - 2680843 I e saiBol1.JH378197 5381236 0 + 8899380 C e calJac3.chr22 28536009 0 + 49145316 C e colAng1.NW_012111697v1 2304465 4 + 4274983 I e manLeu1.NW_012102454v1 868561 4 - 2385121 I e cerAty1.NW_012005268v1 5437749 4 + 7714307 I e macNem1.NW_012011689v1 4507270 4 - 13342542 I e macFas5.chr19 34640677 1 + 59248254 I e rheMac8.chr19 30186943 4 + 53671032 I e nomLeu3.chr10 63876100 0 - 106955855 C a score=70719.000000 s hg38.chr19_GL383574v1_alt 50622 76 + 155864 ctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctaggattacaggcgtgagccaccgcgcctggcGG s panTro5.chr19 36119250 76 + 61309027 ctcctgacctcgtgatccgcccgcctcggcctcccaaagtcctaggattacaggcgtgagccaccgcgcctggcGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865217 76 + 64411610 ctcctgacctcgtgatccgcccgcctcggcctcccaaagtcctaggattacaggcgtgagccaccgcgcctggcGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283043 76 - 8369475 ctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcctggcGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876100 76 - 106955855 ctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcctggcAG i nomLeu3.chr10 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 292756 378 + 643850 I e otoGar3.GL873654 5455851 178 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29244898 4 + 50890351 I e canFam3.chr1 4594922 347 - 122678785 I e aotNan1.NW_018505377v1 340914 875 - 4471408 I e cebCap1.NW_016107633v1 1590655 4 - 2680843 I e saiBol1.JH378197 5381236 0 + 8899380 C e calJac3.chr22 28536009 0 + 49145316 C e colAng1.NW_012111697v1 2304465 4 + 4274983 I e manLeu1.NW_012102454v1 868561 4 - 2385121 I e cerAty1.NW_012005268v1 5437749 4 + 7714307 I e macNem1.NW_012011689v1 4507270 4 - 13342542 I e macFas5.chr19 34640677 1 + 59248254 I e rheMac8.chr19 30186943 4 + 53671032 I a score=6876.000000 s hg38.chr19_GL383574v1_alt 50698 2 + 155864 AC s panTro5.chr19 36119326 2 + 61309027 AC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865293 2 + 64411610 AC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283119 2 - 8369475 AC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876176 2 - 106955855 AC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34640678 2 + 59248254 AC i macFas5.chr19 I 1 C 0 s saiBol1.JH378197 5381236 2 + 8899380 AC i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 341789 2 - 4471408 AC i aotNan1.NW_018505377v1 I 875 C 0 s dasNov3.JH563638 293134 2 + 643850 AC i dasNov3.JH563638 I 378 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e otoGar3.GL873654 5455851 178 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29244898 4 + 50890351 I e canFam3.chr1 4594922 347 - 122678785 I e cebCap1.NW_016107633v1 1590655 4 - 2680843 I e calJac3.chr22 28536009 0 + 49145316 C e colAng1.NW_012111697v1 2304465 4 + 4274983 I e manLeu1.NW_012102454v1 868561 4 - 2385121 I e cerAty1.NW_012005268v1 5437749 4 + 7714307 I e macNem1.NW_012011689v1 4507270 4 - 13342542 I e rheMac8.chr19 30186943 4 + 53671032 I a score=4664.000000 s hg38.chr19_GL383574v1_alt 50700 1 + 155864 T s panTro5.chr19 36119328 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865295 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283121 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876178 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34640680 1 + 59248254 C i macFas5.chr19 C 0 C 0 s calJac3.chr22 28536009 1 + 49145316 T i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5381238 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1590659 1 - 2680843 T i cebCap1.NW_016107633v1 I 4 C 0 s aotNan1.NW_018505377v1 341791 1 - 4471408 T i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4595269 1 - 122678785 t i canFam3.chr1 I 347 C 0 s dasNov3.JH563638 293136 1 + 643850 T i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e otoGar3.GL873654 5455851 178 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e chlSab2.chr6 29244898 4 + 50890351 I e colAng1.NW_012111697v1 2304465 4 + 4274983 I e manLeu1.NW_012102454v1 868561 4 - 2385121 I e cerAty1.NW_012005268v1 5437749 4 + 7714307 I e macNem1.NW_012011689v1 4507270 4 - 13342542 I e rheMac8.chr19 30186943 4 + 53671032 I a score=1383844.000000 s hg38.chr19_GL383574v1_alt 50701 128 + 155864 TTTCTTAAAACTGATGCAAAA-ATAATTCTTATGTGTAAGAGA-TTAGATCATTACTGGCCTTAATTTCTGAAC-TCTTGGAAAAATTAAACACCTCACAATAAATGAAGCATCAAAACAGTATTTCCC-TG s panTro5.chr19 36119329 128 + 61309027 TTTCTTAAAACTGATGCAAAA-ATAATTCTTATGTGTAAGAGA-TTAGATCATTACTGGCCTTAATTTCTGAAC-TCTTGGAAAAATTAAACATCTCACAATAAATGAAGCACCAAAACAGTATTTCCC-TG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865296 128 + 64411610 TTTCTTAAAACTGATGCAAAA-ATAATTCTTATGTGTAAGAGA-TTAGATCATTACTGGCCTTAATTTCTGAAC-TCTTGGAAAAATTAAACATCTCACAATAAATGAAGCACCAAAACAGTATTTCCC-TG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283122 128 - 8369475 TTTCTTAAAACTGATGCAAAA-ATAATTCTTATGTGTAAGAGA-TTAGATCATTACTGGCCTTAATTTCTGAAC-TCTTGGAAAAATTAAACATCTCACAATAAATGAAGCATCAAAACAGCATTTCCC-TG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876179 128 - 106955855 TTTCTTAAAACTGATGCAAAA-ATAATTCTTATGTGTAAGAGA-TGAGATCATTACTGGCCTTAATTTCTGAAC-TCTTGGAAAAATTAAACATCTCACAATAAATGAAGCATCAAAACAGTATTTCCC-TA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30186947 128 + 53671032 TTTCTTAAAGCTGATGCAAAA-ATAATTCTTATGTATAAGAGA-TTAGATCATTACTGGCCTTAATTTCTGAAC-TCTCGGAAAAATTAAACATCTCACAATAAATGAAGCATCAAAACAGTATTTCCC-TA i rheMac8.chr19 I 4 C 0 s macFas5.chr19 34640681 128 + 59248254 TTTCTTAAAGCTGATGCAAAA-ATAATTCTTATGTATAAGAGA-TTAGATCATTACTGGCCTTAATTTCTGAAC-TCTCGGAAAAATTAAACATCTCACAATAAATGAAGCATCAAAACAGTATTTCCC-TA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4507274 128 - 13342542 TTTCTTAAAGCTGATGCAAAA-ATAATTCTTATGTATAAGAGA-TTAGATCATTACTGGCCTTAATTTCTGAAC-TCTCGGAAAAATTAAACATCTCACAATAAATGAAGCATCAAAACAGTATTTCCC-TA i macNem1.NW_012011689v1 I 4 C 0 s cerAty1.NW_012005268v1 5437753 128 + 7714307 TTTCTTAAAGCTGATGCAAAA-ATAATTCTTATGTATAAGAGA-TTAGATCATTACTGGCCTTAATTTCTGAAC-TCTCGGAAAAATTAAACATCTCACAATAAATGAAGCAGCAAAACAGTATTTCCC-TA i cerAty1.NW_012005268v1 I 4 C 0 s chlSab2.chr6 29244902 128 + 50890351 TTTCTTAAAGCTGATGCAAAA-ATAATTCTTATGTATAAGAGA-TTAGATCATTACTGGCCTTAATTTCTGAAC-TCTCGGAAAAATTAAACATCTCACAATAAATGAAGCATCAAAACAGTATTTCCC-TA i chlSab2.chr6 I 4 C 0 s manLeu1.NW_012102454v1 868565 128 - 2385121 TTTCTTAAAGCTGATGCAAAA-ATAATTCTTATGTATAAGAGA-TTAGATCATTACTGGCCTTAATTTCTGAAC-TCTCGGAAAAATTAAACATCTCACAATAAATGAAGCATCAAAACAGTATTTCCC-TA i manLeu1.NW_012102454v1 I 4 C 0 s colAng1.NW_012111697v1 2304469 128 + 4274983 TTTCTTAAAGCTGATGCAAAA-ATAACTCTTATGTATAAGAGA-TTAGATCATTACTGGCCTTAATTTCTGAAC-TCTCGGAAAAATTAAACATCTCACAATAAATGAAGCATCAAAACAGTATTTCCC-TA i colAng1.NW_012111697v1 I 4 C 0 s calJac3.chr22 28536010 128 + 49145316 TTTTTTAAAGCTTATGTGAAA-ATAATTCTTAAGTGCAAGAGA-TTAGATCATTACTGGCC-TAATTTCTGAACGTTTAGGAAAAATTAAACATCTCACAATAAATGAAGCATCAAAACAGTATTTCCC-TA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5381239 129 + 8899380 TTTTTTAAAGCTGATGTGAAA-ATAATTCTTAAGTGCAAGAGA-TTAGATCATTACTGGCCTTAATTTCTGAACATTTAGGAAAAATTAAACATCTCAAAATAAATGAAGCATCAAAACAGTATTTCCC-TA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1590660 129 - 2680843 TTTTTTAAAGCTGATGTAAAA-GTAGTTCTTATGTGCAAGAGA-TTAGATCATTACTGGCCTTAATTTCTGAACATTTAGGAAAAATTAAACATCTCACAATAAATGAAGCATCAAAACAGTATTTACC-TA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 341792 127 - 4471408 TTTTTTAAAGCTGATGTGAAA-ATAATTC-TATGTGCAAGAGATTTAGATCATTACTGTCT-TAATTTCTGAACGTTTAGGAAAAATTAAACATCTCAC-ATAAATGAAGCAT-AAAACAGTATTTCTTGTA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4595270 98 - 122678785 ttgttttgAGCTGATGCTAAA-ATGATTCTTAAGTGCTA-AGA-TTTGGTCTTTATTGACTTTAATTTATGAATCCTTAGGAAAAATTAATGATCCCACAG------------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 293137 127 + 643850 TTTTTTTAAACGGGTACTAAATATAATTCTTACAGGC-AGAGA-TTAGATCATTATTAACCTTAATTTATGGAGATTTAGGAAAAATTAAATACTT---AATAAATGAAGCAGCATAACAGTATTTTCCGTA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e otoGar3.GL873654 5455851 178 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I a score=482125.000000 s hg38.chr19_GL383574v1_alt 50829 50 + 155864 TGTT-ACCATTGAACAGTAG-----CAAGAGCTTACTGCTGCAGTTAG-AAAAAGGA s panTro5.chr19 36119457 50 + 61309027 TGTT-ACCACTGAACAGTAG-----CAAGAGCTTACTGCTGCAGTGAG-AAAAAGGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865424 50 + 64411610 TGTT-ACCATTGAACAGTAG-----CAAGAGCTTACTGCTGCAGTTAG-AAAAAGGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283250 50 - 8369475 TGTT-ACCATTGAACAGTAG-----CAAGAGCTTACTGCTGCAGTTAG-AAAAAGGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876307 50 - 106955855 TGTT-ACCATTGAACAGTAG-----CAAGAGCTTACTGCTGCAGTTAG-AAAAAGGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30187075 50 + 53671032 TGTT-ACCACTGCACAGTGG-----CAAGAGCTTGCTGCTGCAGTTAG-AAAAAGGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34640809 50 + 59248254 TGTT-ACCACTGCACAGTGG-----CAAGAGCTTGCTGCTGCAGTTAG-AAAAAGGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4507402 50 - 13342542 TGTT-ACCACTGCACAGTGG-----CAAGAGCTTGCTGCTGCAGTTAG-AAAAAGGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5437881 50 + 7714307 TGTT-ACCACTGCACAGTAG-----CAAGAGCTTGCTGCTGCAGTTAG-AAAAAGGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29245030 50 + 50890351 TGTT-ACCACTGCACAGTAG-----CAAGAGCTTGCTGCTGCAGTTAG-AAAAAGGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 868693 50 - 2385121 TGTT-ACCACTGCACAGTGG-----CAAGAGCTTGCTGCTGCAGTTAG-AAAAAGGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2304597 50 + 4274983 TGTT-ACCACTGCACAGTAG-----CAAGAACTTACTGCTGCAGTTAG-AAAAAGGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28536138 57 + 49145316 GGTTAACCATTGAACAGTAGAAAAGTAAGAGCTTACTGCTGCTGTTAGAAAAAAGAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5381368 55 + 8899380 TGTT-ACCATTGAACAGTAGAAAA-TAAGAGCTTACTGCTGCTGTTAGAAAAAAGAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1590789 55 - 2680843 TGTT-ACCATTGAACAGTAGAAAA-TAAGAGCTTACTGCTGCTGTTAGAAAAAAGAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 341919 53 - 4471408 TGTT-ACCA-TGAACAGTAGAAAA-TAAGAGCTTACTGTTGCTGTTAG-AAAAATAA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5456029 54 + 5549422 TGCT-CCCATTGAAGATTTGTCAA-TAAGAGCTTGCTACTTTGATCAG-AAAAAGGA i otoGar3.GL873654 I 178 I 129 s canFam3.chr1 4595368 29 - 122678785 -----------GATCATTAG-----GAAGGGAT---------AAACAG-CAAAAG-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 293264 54 + 643850 TTTT-TCCATGAATCAGTAGACAA-TCAGAGCTTACTGATGCATTGAG-AAACAGGA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e mm10.chr7 111070496 1963 - 145441459 I a score=1024481.000000 s hg38.chr19_GL383574v1_alt 50879 99 + 155864 TTCATAGAAACAGTGAAAGGTATAGATTGACCAGCTATCTAAAGTAATTCTATAGCAAGGATTACAGTGAAG-AAACATGGAG-CAATTAGATGTTTTTTC---- s panTro5.chr19 36119507 99 + 61309027 TTCATAGAAACAGTGAAAGGTATAGATTGACCAGCTATTTAAAGTAATTCTATAGCAAGGATTACAGTGAAG-AAACATGGAG-CAATTAGATATTTTTTC---- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865474 99 + 64411610 TTCATAGAAACAGTGAAAGGTATAGATTGACCAGCTATTTAAAGTAATTCTATAGCAAGGATTACAGTGAAG-AAACATGGAG-CAATTAGATATTTTTTC---- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283300 99 - 8369475 TTCATAGAAACAGTGAAAGGTATAGATTGACCAGCTATCTAAAGTAATTCTATAGCAAGGATTACAGTGAAG-AAACATGGAG-CAATTAGATATTTTTTC---- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876357 99 - 106955855 TTCATAGAAACAGTGAAAGGTATAGATTGACCACCTATCTAAAGTAATTCTGTAGCAAGGATTAAAATGAAG-AAACATGGAG-CAATTAGATATTTTTTC---- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30187125 99 + 53671032 TTAATAGAAACAGTGAAAGGTATAGATTGACCAACTATCTAAAGTAACTCTATAGCAAGGATTAAAATGAAG-AAACATGTAG-CAATTAGATATTTTTTC---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34640859 99 + 59248254 TTAATAGAAACAGTGAAAGGTATAGATTGACCAACTATCTAAAGTAACTCTATAGCAAGGATTAAAATGAAG-AAACATGTAG-CAATTAGATATTTTTTC---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4507452 99 - 13342542 TTAATAGAAACAGTGAAAGGTATAGATTGACCAACTATCTAAAGTAATTCTATAGCAAGGATTAAAATGAAG-AAACATGTAG-CAATTAGATATTTTTTC---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5437931 99 + 7714307 TTAATAGAAACAGTGAAAGGTATAGATTGACCAACTATCTAAAGTAATTCTATAGCAAGAATTAAAATGAAG-AAACATGGAG-CAATTAGATATTTTTTC---- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29245080 99 + 50890351 TTAATAGAAACAGTGAAAGGTATAGATTGACCAACTATCTAAAGTAATTCTATAGCAAGGATTAAAATGAAG-AAACATGGAG-CAATTAGATATTTTTTC---- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 868743 99 - 2385121 TTAATAGAAACAGTGAAAGGTATAGATTGACCAACTATCTAAAGTAATTCTATAGCAAGGATTAAAATGAAG-AAACATGGAG-CAATTAGATATTTTTTC---- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2304647 99 + 4274983 TTCATAGAAACAGTGAAAGGTATAGATTGACCAACTATCTAAAGTAATTCTATAGCAAGGATTAAAATGAAG-AAACGTGGAG-CAATTAGATATTTTTTC---- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28536195 99 + 49145316 TTTGTAGAAACAGTGAAAGGTACAGATTGACCAACTATCTAACATAATTCTGTAGCAAGGATTAAAATGAAC-AAATAGGGAG-CAATTAGATATTTTTTC---- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5381423 99 + 8899380 TTTGTAGAAACAGTGAAAGGTACAGATTGACCAACTATCTAACATAATTCTGTAGCAAGGATTAAAATGAAC-AAATATGGAG-CAATTAGATATTTTTTC---- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1590844 99 - 2680843 TTTGTAGAAACAATGAAAGGCACAGATTGACCAACTATCTAACATAATTCTGTAGCAAGGATTAAAATGAAC-AAATATGAAG-CAATTAGATATTTTTTC---- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 341972 98 - 4471408 TTTGTAGAAACAGTGAAAGGTACAGATTGACCAACTATCTAACATAATTCTGTAGCAAGGATT-AAATGAACAAAATATGGAG-CAATTA-ATATTTTTTC---- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5456212 89 + 5549422 TTCATAGAAACA-----------AAATTGACCAATTATTTAACTTAATTCTGTAGCAAGGATTAACACAGAG-GAATGCAAGGCCAGTTAAACCCCCTTTC---- i otoGar3.GL873654 I 129 I 214 s canFam3.chr1 4595397 25 - 122678785 ------GAAACAGCAAAA-------------CAGCCATACCATG------------------------------------------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 293318 101 + 643850 TTCATAGAAACAGAGAATGGTAGAT-TTTATGAGCTATTTAAATTAAATCCATAGCAAG-ATTAAAATAAAG-GCACTTGAGG-AAATTGAATCTTTTTTTTTCC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e mm10.chr7 111070496 1963 - 145441459 I a score=142668.000000 s hg38.chr19_GL383574v1_alt 50978 14 + 155864 TGTTATAT-TTACTC s panTro5.chr19 36119606 14 + 61309027 TGTTATAT-TTACTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865573 14 + 64411610 TGTTATAT-TTACTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283399 14 - 8369475 TGTTATAT-TTACTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876456 14 - 106955855 TGTTATAT-TTACTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30187224 14 + 53671032 TGTTATAT-TTACTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34640958 14 + 59248254 TGTTATAT-TTACTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4507551 14 - 13342542 TGTTATAT-TTACTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5438030 14 + 7714307 TGTTACAT-TTACTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29245179 14 + 50890351 TGTTATAT-TTACTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 868842 14 - 2385121 TGTTATAT-TTACTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2304746 14 + 4274983 TGTTATAT-TTACTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28536294 14 + 49145316 TGTTATGT-TTACTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5381522 14 + 8899380 TGTTATAT-TTACTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1590943 14 - 2680843 TGTTATAT-TTACTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 342070 14 - 4471408 TG-TATATATTACTC i aotNan1.NW_018505377v1 C 0 I 67 s dasNov3.JH563638 293419 12 + 643850 TGTTAT---TTACTC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e otoGar3.GL873654 5456301 214 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4595422 0 - 122678785 C a score=40854.000000 s hg38.chr19_GL383574v1_alt 50992 8 + 155864 CAGTTGAT------------------------------------------ s panTro5.chr19 36119620 8 + 61309027 CAGTTGAT------------------------------------------ i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865587 8 + 64411610 CAGTTGAT------------------------------------------ i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283413 8 - 8369475 CAGTTGAT------------------------------------------ i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876470 8 - 106955855 CAGTTGAT------------------------------------------ i nomLeu3.chr10 C 0 I 59 s rheMac8.chr19 30187238 8 + 53671032 CAATTGAT------------------------------------------ i rheMac8.chr19 C 0 I 58 s macFas5.chr19 34640972 8 + 59248254 CAATTGAT------------------------------------------ i macFas5.chr19 C 0 I 58 s macNem1.NW_012011689v1 4507565 8 - 13342542 CAATTGAT------------------------------------------ i macNem1.NW_012011689v1 C 0 I 58 s cerAty1.NW_012005268v1 5438044 8 + 7714307 CAATTGAT------------------------------------------ i cerAty1.NW_012005268v1 C 0 I 59 s chlSab2.chr6 29245193 8 + 50890351 CAATTGAT------------------------------------------ i chlSab2.chr6 C 0 I 59 s manLeu1.NW_012102454v1 868856 8 - 2385121 CAATTGAT------------------------------------------ i manLeu1.NW_012102454v1 C 0 I 59 s colAng1.NW_012111697v1 2304760 8 + 4274983 CAGTTGAT------------------------------------------ i colAng1.NW_012111697v1 C 0 I 59 s calJac3.chr22 28536308 8 + 49145316 AAGTTGAT------------------------------------------ i calJac3.chr22 C 0 I 59 s saiBol1.JH378197 5381536 7 + 8899380 AA-TTGAT------------------------------------------ i saiBol1.JH378197 C 0 I 57 s cebCap1.NW_016107633v1 1590957 8 - 2680843 TAGTTGAT------------------------------------------ i cebCap1.NW_016107633v1 C 0 I 59 s dasNov3.JH563638 293431 50 + 643850 CAGTTAATGAGGTCAGCTAGATTTTCACAAATAATTTAGATAAAATGAAT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e otoGar3.GL873654 5456301 214 + 5549422 I e mm10.chr7 111070496 1963 - 145441459 I e canFam3.chr1 4595422 0 - 122678785 C e aotNan1.NW_018505377v1 342084 67 - 4471408 I a score=24024.000000 s hg38.chr19_GL383574v1_alt 51000 2 + 155864 TG s panTro5.chr19 36119628 2 + 61309027 TG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865595 2 + 64411610 TG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283421 2 - 8369475 TG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876537 2 - 106955855 TG i nomLeu3.chr10 I 59 C 0 s rheMac8.chr19 30187304 2 + 53671032 TG i rheMac8.chr19 I 58 C 0 s macFas5.chr19 34641038 2 + 59248254 TG i macFas5.chr19 I 58 C 0 s macNem1.NW_012011689v1 4507631 2 - 13342542 TG i macNem1.NW_012011689v1 I 58 C 0 s cerAty1.NW_012005268v1 5438111 2 + 7714307 TG i cerAty1.NW_012005268v1 I 59 C 0 s chlSab2.chr6 29245260 2 + 50890351 TG i chlSab2.chr6 I 59 C 0 s manLeu1.NW_012102454v1 868923 2 - 2385121 TG i manLeu1.NW_012102454v1 I 59 C 0 s colAng1.NW_012111697v1 2304827 2 + 4274983 tg i colAng1.NW_012111697v1 I 59 C 0 s calJac3.chr22 28536375 2 + 49145316 tg i calJac3.chr22 I 59 C 0 s saiBol1.JH378197 5381600 2 + 8899380 TG i saiBol1.JH378197 I 57 C 0 s cebCap1.NW_016107633v1 1591024 2 - 2680843 tg i cebCap1.NW_016107633v1 I 59 C 0 s mm10.chr7 111072459 2 - 145441459 TG i mm10.chr7 I 1963 C 0 s dasNov3.JH563638 293481 2 + 643850 CG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e otoGar3.GL873654 5456301 214 + 5549422 I e canFam3.chr1 4595422 0 - 122678785 C e aotNan1.NW_018505377v1 342084 67 - 4471408 I a score=97766.000000 s hg38.chr19_GL383574v1_alt 51002 9 + 155864 --------------------TTTAAGtct s panTro5.chr19 36119630 9 + 61309027 --------------------TTTAAGtct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865597 9 + 64411610 --------------------TTTAAGtct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283423 9 - 8369475 --------------------TTTAAGtct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876539 9 - 106955855 --------------------TTTAAGtct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30187306 9 + 53671032 --------------------TTTAAGtct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34641040 9 + 59248254 --------------------TTTAAGtct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4507633 9 - 13342542 --------------------TTTAAGtct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5438113 9 + 7714307 --------------------TTTAAGtct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29245262 9 + 50890351 --------------------TTTAAGtct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 868925 9 - 2385121 --------------------TTTAAGtct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2304829 9 + 4274983 --------------------tttaagtct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28536377 9 + 49145316 --------------------tttaagtct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5381602 9 + 8899380 --------------------TTTAAGttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1591026 9 - 2680843 --------------------tttaagttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 342151 9 - 4471408 --------------------TTTAAGttt i aotNan1.NW_018505377v1 I 67 C 0 s mm10.chr7 111072461 9 - 145441459 --------------------CTGAAGTTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4595422 8 - 122678785 ---------------------CTAAGtct i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 293483 29 + 643850 TTTCCTATATGCCATAGGATGCTGAGTCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e otoGar3.GL873654 5456301 214 + 5549422 I a score=1220485.000000 s hg38.chr19_GL383574v1_alt 51011 102 + 155864 cataat----ctt------atgtgcc-------------ag-atggaggagtattggctgaatagac---catcag-tgggtacattttagttgattaa-atagccaaaccATATTGGAGGATGGTTCTCT s panTro5.chr19 36119639 102 + 61309027 tataat----ctt------atgtgcc-------------ag-atggaggagtattggctgaatagac---catcag-tgggtacattttagttgattaa-atagccaaaccATATTGGAGGATGGTTCTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865606 102 + 64411610 tataat----ctt------atgtgcc-------------ag-atggaggagtattggctgaatagac---catcag-tgggtacattttagttgattaa-atagccaaaccatattggaggatggttctct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283432 102 - 8369475 cataat----ctt------atgtgcc-------------ag-atggaggagtattggccgaatagac---catccg-tgggtacattttagttgattaa-atagccaaaccatattggaggatggttctct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876548 102 - 106955855 cataat----ctt------atgtgcc-------------ag-atggaggaatattggctgaatagac---catcag-tgggtacattttagttgattaa-atagccaaaccatattggaagatggttctct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30187315 102 + 53671032 cataat----ctt------atgtgcc-------------ag-atggaggaatattggctgaatagac---catcag-taggtacattttagttgatgaa-atagccaaaccatattggaggatggttctct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34641049 102 + 59248254 cataat----ctt------atgtgcc-------------ag-atggaggaatattggctgaatagac---catcag-taggtacattttagttgatgaa-atagccaaaccATATTGGAGGATGGTTCTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4507642 102 - 13342542 cataat----ctt------atgtgcc-------------ag-atggaggaatattggctgaatagac---catcag-taggtacattttagttgatgaa-atagccaaaccATATTGGAGGATGGTTCTCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5438122 102 + 7714307 cataat----ctt------atgtgcc-------------ag-atggaggaatattggctgaatagac---catcag-taggtacattttagttgatgaa-atagccaaaccATATTGGAGGATGGTTCTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29245271 102 + 50890351 cataat----ctt------atgtgcc-------------ag-atggaggaatattggctgaatagac---catcag-taggtacattttagttgatgaa-atagccaaaccATATTGGAGGATGGTTCTCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 868934 99 - 2385121 cataat----ctt------atgtgcc-------------ag-atggaggaatattggctgaatagac------cag-taggtacattttagttgatgaa-atagccaaaccatattggaggatggttctct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2304838 102 + 4274983 cataat----ctt------atgtgcc-------------ag-atggaggaatattggctgaatagac---catcat-taggtacattttagttgattaa-atagccaaaccatattggaggatggttctct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28536386 102 + 49145316 cataat----ctt------atgtgcc-------------ag-atggaggaatattggccgagtaaac---catcaa-tgggtacattttagttggttaa-atagccaaaccATATTGGAGCATGGTTCTCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5381611 98 + 8899380 cataat----cgt------atgtgcc-------------ag-atggaggaatatgggctgaatagac---catcaa-tgggtacatt----ttggttaa-atagccaaaccATATTGAAGCATGGTTCTCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1591035 102 - 2680843 cataat----ctt------atatgcc-------------ag-atggaggaatattggctgaatagac---catcaa-tgggtacattttagttggttaa-atagccaaaccATATTGGAGCATGGTTCTCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 342160 102 - 4471408 cataat----c-t------atgtgcc-------------ag-atggaggaatattggctgaatagac---catcaa-tgggtacattttagttggttaaTAGCGCCAAACCATATTGGAGCATGGTTCTCC i aotNan1.NW_018505377v1 C 0 I 64 s otoGar3.GL873654 5456515 104 + 5549422 CATAAT----CTT------ATG-ACA-------------AG-ATAGAAAACTATTGACTGAATGGACAGATGAAAA-TGGGTACAATTTAGCTGGTTAA-ATGGTCAAACAATATTGGCTGATGATTCTTT i otoGar3.GL873654 I 214 C 0 s mm10.chr7 111072470 83 - 145441459 AGTACT----CTT------AACAGGC-------------AGAATGGCAGAATTTTGACCAAATA------------------ACATTTTAGTTGGTTAA-TCAACCA------GCTGTTTGATGATTCTCT i mm10.chr7 C 0 C 0 s canFam3.chr1 4595430 107 - 122678785 cataatacacttt------gtggata-------------ag-acagagaactaatgactgaatagac---agacagatgggtacattttaattggttaa-atagtcaaaccatattagacaatgattgtct i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 293512 118 + 643850 CATAAT----ATTCTTGTAGTATACCCATAATACCCTTGAG-ATGGAGGAATGTTAGTTGAACAGAC------AAA-TGGTTGCATACATGGCAGGTTA-ATTGCTAAAGCATATCAGGTAATAATTCTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I a score=118869.000000 s hg38.chr19_GL383574v1_alt 51113 15 + 155864 TAGGTCTCCAGTGTT s panTro5.chr19 36119741 15 + 61309027 TAGGTCTCCAGTGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865708 15 + 64411610 taggtctccagtgtt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283534 15 - 8369475 taggtctccagtgtt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876650 15 - 106955855 taggtctccagtgtt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30187417 14 + 53671032 tagggctccagtg-t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34641151 14 + 59248254 TAGGGCTCCAGTG-T i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4507744 14 - 13342542 TAGGGCTCCAGTG-T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5438224 14 + 7714307 TAGGGCTCCAGTG-T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29245373 14 + 50890351 TAGGGCTCCAGTG-T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 869033 14 - 2385121 tagggctccagtg-t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2304940 15 + 4274983 tagggctccagtgtt i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5456619 15 + 5549422 TAGGTCTCCAGTGTT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111072553 15 - 145441459 TAGGTCTCCAGTATT i mm10.chr7 C 0 I 2157 s canFam3.chr1 4595537 15 - 122678785 taggtctccagtgtt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 293630 15 + 643850 TAGGTCTTAAGTGTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e aotNan1.NW_018505377v1 342262 64 - 4471408 I e cebCap1.NW_016107633v1 1591137 0 - 2680843 C e saiBol1.JH378197 5381709 0 + 8899380 C e calJac3.chr22 28536488 0 + 49145316 C a score=155557.000000 s hg38.chr19_GL383574v1_alt 51128 18 + 155864 TTGTAGAGACTAa-ttttt s panTro5.chr19 36119756 18 + 61309027 TTGTAGAGACTAa-ttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865723 18 + 64411610 ttgtagagactaa-ttttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283549 18 - 8369475 ttgtagagactaa-ttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876665 18 - 106955855 ttgtagagactaa-ttttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30187431 18 + 53671032 ttgtatagactaa-ttttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34641165 18 + 59248254 TTGTATAGACTAa-ttttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4507758 18 - 13342542 TTGTATAGACTAa-ttttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5438238 18 + 7714307 TTGTATAAACTAa-ttttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29245387 18 + 50890351 TTGTATAGACTAa-ttttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 869047 18 - 2385121 ttgtatagactaa-ttttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2304955 18 + 4274983 ttgtatagactaa-ttttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28536488 12 + 49145316 ------ATGCTAa-ttttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5381709 13 + 8899380 ------ATGCTAATTtttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1591137 12 - 2680843 ------ATGCTAa-ttttt i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5456634 18 + 5549422 ACATACAGATTAA-CTTTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4595552 18 - 122678785 tcatacagattaa-ttttt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 293645 18 + 643850 TTCTCAGGGTTAA-TTTTT i dasNov3.JH563638 C 0 I 9824 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e mm10.chr7 111072568 2157 - 145441459 I e aotNan1.NW_018505377v1 342262 64 - 4471408 I a score=480230.000000 s hg38.chr19_GL383574v1_alt 51146 52 + 155864 aatcactgag--tgatgaagcctt-gaagagatgcttacgaactttacagttagc s panTro5.chr19 36119774 52 + 61309027 aatcactgag--tgatgaagcctt-gaagagatgcttacgaactttacagttagc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865741 52 + 64411610 aatcactgag--taatgaagcctt-gaagagatgcttacgaactttacagttagc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283567 52 - 8369475 aatcactgag--tgatgaagcctt-gaagagatgcttacgaactttacagttagc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876683 52 - 106955855 aatcactgag--tgatgaagcctt-gaagagatgcttacgaactttacagttagc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30187449 51 + 53671032 aatcactgag--tgatgaag-ctt-gaagagatgcttatgaacttcacagttagc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34641183 51 + 59248254 aatcaccgag--tgatgaag-ctt-gaagagatgcttatgaactttacagttagc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4507776 51 - 13342542 aatcaccgag--tgatgaag-ctt-gaagagatgcttatgaactttacagttagc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5438256 51 + 7714307 aatcaccgag--tgatgaag-ctt-gaagagatgcttatgaactttacagttagc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29245405 51 + 50890351 aatcaccgag--tgatgaag-ctt-gaagagatgcttatgaactttacagttagc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 869065 51 - 2385121 aatcaccgag--tgatgaag-ctt-gaagagatgcttatgaactttacagttagc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2304973 51 + 4274983 aatcaccaag--tgatgaag-ctt-gaagagatgcttatgaactttacagttagc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28536500 52 + 49145316 aattactgag--tgatgaagcctt-gaaagcatgcttatgaacttcatgggtagc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5381722 52 + 8899380 aattactgag--tgatgaagcctt-gaaagcatgcttatgaacttcatgggtagc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1591149 52 - 2680843 aattactgag--tgatgaagcctt-gaaagcatgcttatgaacttcatgggtagc i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5456652 52 + 5549422 AATCACAGAGTTTGGTGAAGCCTTAGAAGACAATCTTATGAACTGTACAGTT--- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4595570 55 - 122678785 aacctctgagtttgatgaacatttagaagacatgcttatgaactttatacatagc i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e mm10.chr7 111072568 2157 - 145441459 I e aotNan1.NW_018505377v1 342262 64 - 4471408 I a score=532094.000000 s hg38.chr19_GL383574v1_alt 51198 59 + 155864 -------ataaagccaggggggTGTTTCAACCATTATGGATGTTAAAC-TAAGGATTATTAAAGATC s panTro5.chr19 36119826 59 + 61309027 -------ataaagccaggggggTGTTTCAACCATTATGGATGTTAAAC-TAAGGATTGTTAAAGATC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865793 59 + 64411610 -------ataaagccaggggggtgtttcaaccattatggatgttaaac-taaggattgttaaagatc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283619 59 - 8369475 -------ataaagccaggggggtgtttcaaccattatggatgttaaac-taaggattgttaaagatc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876735 60 - 106955855 -------gtgaagccagggggatgtttcaaccattacggatgttaaacttaaggattgttaaagatc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30187500 58 + 53671032 -------ataaagtcaggggg-tgtttcaaccattatggatgttaaac-taaggattgttaaagatc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34641234 58 + 59248254 -------ataaagtcaggggg-tgtttcaaccattatggatgttaaac-taaggattgttaaagatc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4507827 58 - 13342542 -------ataaagtcaggggg-TGTTTCAACCATTAGGGATGTTAAAC-TAAGGATTGTTAAAGATC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5438307 58 + 7714307 -------ataaagtcaggggg-TGTTTCAACCATTATGGATATTAAAC-TAAGGATTGTTAAAGATC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29245456 58 + 50890351 -------ataaagtcaggggg-tgtttcaaccattatggatgttaaac-taaggattgttaaagatc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 869116 58 - 2385121 -------ataaagtcaggggg-tgtttcaaccattatggatgttaaac-taaggattgttaaagatc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2305024 58 + 4274983 -------ataaagtcaggggg-tgtttcaaccattatggatgttaaac-taaggattgttaaagatc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28536552 58 + 49145316 -------ataaagccaggagggTGTTTCAAGCATTATGGATATTAGAC-TAAGGATTGTTAC-GATC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5381774 17 + 8899380 -------ataaagacaggagggTG------------------------------------------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1591201 59 - 2680843 -------ataaagccaggaggCTGTTTCAGGCATTATGGATGTTAGAC-TAAGGATTGTTACAGATC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 342326 59 - 4471408 -------ataaagccaggagggtgtttcaagcattatggatgttagac-taaggattGTTACAGATC i aotNan1.NW_018505377v1 I 64 C 0 s otoGar3.GL873654 5456704 55 + 5549422 -----------AGTCAAGTAGGTATTTTACGCATTAGGGATATCAGAC-TAAGGATTGTTAAAGATC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4595625 65 - 122678785 atagagcataaaacttataaa-catttaatacattggggctgacagac-tgaggagtgttaaagatc i canFam3.chr1 C 0 I 1181 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e mm10.chr7 111072568 2157 - 145441459 I a score=694051.000000 s hg38.chr19_GL383574v1_alt 51257 73 + 155864 Agaccaggcacagt------ggctcacgcctgtaatcccag--------cactttgg---------------------------------------------gaggctgagacg--agtgaatcatttgaggtc s panTro5.chr19 36119885 73 + 61309027 Agaccaggcacagt------ggctcaggcctgtaatcccag--------cactttgg---------------------------------------------gaggctgagacg--agtgaatcatttgaggtc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865852 73 + 64411610 Agaccaggcacagt------ggctcaggcctgtaatcccag--------cactttgg---------------------------------------------gaggctgagacg--agtgaatcatttgaggtc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283678 73 - 8369475 Agaccaggcacagt------ggctcaggcctgtaatcccag--------cactttgg---------------------------------------------gaggctgagacg--agtgaatcatttgaggtc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876795 73 - 106955855 Agaccaggcacagt------ggctcacgcctgtaatcccag--------cactttgg---------------------------------------------gaggctgagacg--agtgaatcatttgaggtc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30187558 73 + 53671032 Agaccaggcacagt------ggctcacgcctgtaatcccaa--------cacgttgg---------------------------------------------gaggctgagacg--ggtgaatcatttgaggtc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34641292 73 + 59248254 agaccaggcacagt------ggctcacgcctgtaatcccaa--------cacgttgg---------------------------------------------gaggctgagacg--ggtgaatcatttgaggtc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4507885 73 - 13342542 Agaccaggcacagt------ggctcacgcctgtaatcccaa--------cacgttgg---------------------------------------------gaggctgagacg--ggtgaatcatttgaggtc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5438365 73 + 7714307 Agaccaggcacagt------ggctcacgcctgtaatcccaa--------cactttgg---------------------------------------------gaggctgagacg--ggtgaatcatttgaggtc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29245514 73 + 50890351 Agaccaggcacagt------ggctcacgcctataatcccaa--------cactttgg---------------------------------------------gaggctgagacg--ggtgaatcatttgaggtc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 869174 73 - 2385121 Agaccaggcacagt------ggctcacgcctgtaatcccaa--------cactttgg---------------------------------------------gaggctgagacg--ggtgaatcatttgaggtc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2305082 73 + 4274983 Agaccaggcacagt------ggctcacgcctgtaatcccaa--------cactttgg---------------------------------------------gaggctgagacg--ggtgaatcatttgaggtc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28536610 73 + 49145316 Aggccaggcacagt------ggctcacacctgtaatcccag--------cactttgg---------------------------------------------gaagctgagcag--ggtgaaccatttgaggtc i calJac3.chr22 C 0 I 9 s saiBol1.JH378197 5381791 63 + 8899380 -Agccgggcgcgat------ggctcaagcctgtaatcccag--------cactttgg---------------------------------------------gaggccgaggcg--ggtggatca--------- i saiBol1.JH378197 C 0 I 3831 s cebCap1.NW_016107633v1 1591260 73 - 2680843 Aggccaggcacagt------ggctcacgcctataatcccag--------cactttgg---------------------------------------------gaagttgagcgg--ggtgaatcatttgaggtc i cebCap1.NW_016107633v1 C 0 I 9 s aotNan1.NW_018505377v1 342385 73 - 4471408 Aggccaggcacagt------ggctcacgcctgtaatcccag--------cactttgg---------------------------------------------gaagctgagcag--ggtgaatcatttgaggtc i aotNan1.NW_018505377v1 C 0 I 9 s otoGar3.GL873654 5456759 129 + 5549422 TGTTTTGGTAAAGCAtaaagggattaaac-----attccagttagaagtcatttcggactggatgaaaataaaccagagtaggcttgttgtctatagatcaaggggctaaggcgccagccacttacactagagc i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4595690 1181 - 122678785 I a score=2973230.000000 s hg38.chr19_GL383574v1_alt 51330 384 + 155864 aggagttcaggatcagcctggccaacacagtgaaaccctgtctctactaaaaatac-aaaaaaaatgagccgggctt--ggtggcgtgcgcctgtaatcccagctactcaggaggctgaggcaggagaatccctggaacccaggagatgaaggttgcagtgagttgaaatcatgccactgtactccagcctgagcaacagagcgagaccctgtctc-aaaaaaaaaaaaa-agaaagaaaGATTGTTAAAGATCTACTTTGGTAaaatg-tgaaggaattaaacattccagttaaaaggcagagagtgtcagactgaatttaaaaaaa-aa-------aaaaaaaagacaaggcccaactatattatgtttataagaaatgcactgaaagtgaaagaa s panTro5.chr19 36119958 377 + 61309027 aggagttcaggatcagcctggccaacacagtgaaaccctgtctctactaaaaatac-aaaaaaaatgagccgggctt--ggtggcgtgcgcctgtaatcccagctactcaggaggctgaggcaggagaatccctggaacccaggagatgaaggttgcagtgagttgaaatcatgccactgtactccagcctgagcaacagagcgagaccctgtctcaaaaaaaaaaaaaa-aaaaagaaaGATTGTTAAAGATCTACTTTGGTAaaatg-tgaaggaattaaacattccagttaaaaggcagagagtgtcagactgaatt---------aa-------aaaaaaaagacaaggcccaactatattatgtttataagaaatgcactgaaagtgaaagaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39865925 368 + 64411610 aggagttcaggatcagcctggccaacacagtgaaaccctgtctctactaaaaatac-aaaaaaaatgagccgggctt--ggtggcgtgcgcctgtaatcccagctactcaggaggctgaggcaggagaatccctggaacccaggagatgaaggttgcagtgagttgaaatcatgccactgtactccagcctgagcaacagagcgagaccctgtctc--------aaaaaa-aaaaagaaaGATTGTTAAAGATCTACTTTGGTAaaatg-tgagggaattaaacattccagttaaaaggcagagagtgtcagactgattt----------a-------aaaaaaaagacaaggcccaactatattatgtttataagaaatgcactgaaagtgaaagaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6283751 381 - 8369475 aggagttcaggatcagcctggccaacacagcgaaaccctgtctctactaaaaatac-aaaaaaaatgagccgggctt--ggtggcgtgtgcctgtaatcccagctactcaggaggctgaggcaggagaatccctggaacccaggagatgaaggttgcagtgagttgaaatcatgccactgtactccagcctgagcaacagagcgagaccctgtctc--aaaaaaaaaaaa-aaaaagaaaGATTGTTAAAGATCTACTTTGGTAaaatg-tgaaggaattaaacattccagttaaaaggcagagagtgtcagactgaatt--aaaata-aa-------aaaaaaaagacaaggcccaactatattatgtttataagaaatgcactgaaagtgaaagaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63876868 369 - 106955855 agaagttcaagatcagcctggccaacatggtgaaa-cctgtctctactaaaaatac--aaaaaaatgagccaggcat--ggtggcatgcgcctgtaatcccagctactgcggaggctga-gcaagag-atccctggaacccaggaggcgaaggttgcagtgagttgagatcacgccactgtactccagcct--------gagcgagaccatgtctc-caaaacaaaaaaa-aaaaagaaaGATtattaaagatctactttggtaaaaca-tgaaggaattaaacattccagttaaaaggcagagagtgtcagactgaatt---aaaaa-aa-------aaaaaaaagacaaggcccaactatattatgtttataagaaatgcactgaaagtgaaagaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30187631 373 + 53671032 aggagttcaagagcagcctggccaacacggtgaaagcctgtctctactaaaaatac--aaaaaaatgagctgggcat--ggtggcgtgcacctgtaatcccagctactcaggaggctgaggccggagaatccctggaacccaggaagcaaaggttgcagtgagtcaagatcatgccactgcactccagcctgagcgacagagtgagaccctgcctc------aaaaaaagaaaaaaaaaaGATTGTTAAAGATCTactttggtaaaacgttgaagggattaaacatttcaattaaaaggcagagagtgtcagactgaatt-------t-aa-------aaaaaagagacaaggcccaactatattatgtttataagaaatgcactgaaagtgaaagaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34641365 373 + 59248254 aggagttcaagagcagcctggccaacacggtgaaagcctgtctctactaaaaatac--aaaaaaatgagctgggcat--ggtggcgtgcacctgtaatcccagctactcaggaggctgaggccggagaatccctggaacccaggaagcaaaggttgcagtgagtcaagatcatgccactgcactccagcctgagcgacagagtgagaccctgcctc------aaaaaaagaaaaaaaaaaGATTGTTAAAGATCTactttggtaaaacgttgaagggattaaacatttcaattaaaaggcagagagtgtcagactgaatt-------t-aa-------aaaaaagagacaaggcccaactatattatgtttataagaaatgcactgaaagtgaaagaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4507958 373 - 13342542 aggagttcaagagcagcctggccaacacggtgaaagcctgtctctactaaaaatac--aaaaaaatgagctgggcat--ggtggcgtgcacctgtaatcccagctactcaggaggctgaggccggagaatccctggaacccaggaagcaaaggttgcagtgagtcaagatcatgccactgcactccagcctgagcgacagagtgagaccctgcctc------aaaaaaag-aaaaaaaaaGATTGTTAAAGATCTactttggtaaaacgttgaagggattaaacatttcaattaaaaggcagagagtgtcagactgaatt-------taaa-------aaaaaagagacaaggcccaactatattatgtttataagaaatgcactgaaagtgaaagaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5438438 372 + 7714307 aggagttcaagagcagcctggccaacacggtgaaagcctgtctctactaaaaatac--aaaaaaatgagctgggcat--ggtggtgtgcacctgtaatcccagctactcaggaggctgaggccggagaatccctggaacccaggaagcaaaggttgcagtgagtcaagatcatgccactgcactccagcctgagcgacagagtgagaccctgcctc------aaaaaaag-aaaagaaaaGATTGTTAAAGATCTactttggtaaaacgttgaagggattaaacatttcaattaaaaggcagagagtgtcagactgaatt-------t-ag-------aaaaaagagacaaggcccaactatattatgtttataagaaatgcactgaaagtgaaagaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29245587 369 + 50890351 aggagttcaagagcagcctggccaacacggtgaaagcctgtctctactaaaaatacaaaaaaaaatgaactgggcat--ggtggcgtgcacctgtaatcccagctactcaggaggctgaggcaggagaatccctggaacccaggaagcaaaggttgcagtgagtcaagatcatgccactgcactccagcctgagcgacagagtgagaccctgcctc------aaaaaaaa-aaaaaaaaaGGTTATTAAAGATttactttggtaaaacgttgaagggattaaacatttcaattaaaaggcagagagtgtcagactgaatt--------------------aaaagagacaaggcccaactatattatgtttataagaaatgcactgaaagtgaaagaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 869247 372 - 2385121 aggagttcaagagcagcctggccaacacggtgaaagcctgtctctactcaaaatac--aaaaaaatgagctgggcat--ggtggcgtgcacctgtaatcccagctactcaggaggctgaggccggagaatccctggaacccaggaagcaaaggttgcagtgagtcaaggtcatgccactgcactccagcctgagcgacagagtgagaccctgcctc------aaaaaaag-aaaaaaaaaGATTGTTAAAGATCTACTTTGGTAAAACGTTGaagggattaaacatttcaattaaaaggcagagagtgtcagactgaatt-------t-ta-------aaaaaagagacaaggcccaactagattatgtttataagaaatgcactgaaagtgaaagaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2305155 375 + 4274983 aggagttcaagagcagcctggccaacacggtgaaaccctgtctctactaaaaatac--aaaaaaatgagctgggcat--ggtggcgtgcacctgtaatcccagctactcaggaggctgaggcaggagaatccctggaacccaggaagcaaaggttgcagtgagtcaagatcatgccactgcactccaacctgagcgacagagcgagaccctgcccc---caaaaaaaaaa-aaaaaaaaaaaTTGTTAAAGATCTactttggtaaaacgttgaagggattaaacattccaattaaaaggcagagagtgtcagactgaatt-------a-aa-------aaaaaaaagacaaggcccaactatattatgtttataagaaatgcactgaaagtgaaagaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28536692 358 + 49145316 aggagtttgagatcagcctggccatcatggtgaaaacctgtctctact-aaaatac--aaaaaaatgagtcagacat--ggtggcacacacctgtaatcccagctacttgggaggctgaggcaggagaattgctggaacccaggaggtagaggttgcagtgagtcaggatcacgtcactgcactccatcctgggtgac--agcgagaccatgtctc---------------aaaaaaaaaGATTATTAAACATCTGCTTTGGTAaaatg-tgaaggaatgaaacattccagttaaaaggtagagagtatcagactgaatc---------aattttttaaaa--------atggctcgactgtattatgtttacaagagatgcactgaaagtaaaagaa i calJac3.chr22 I 9 C 0 s cebCap1.NW_016107633v1 1591342 359 - 2680843 agaagttcaatatcagcctggccatcatggtgaaaccctgtctctact-aaaatac--aaaaaaatgagccagacgt--ggtggcatacatctgtaatcccagctacttgggaggctgaggcaggagaatcgctgcaacccagaaggtagaggttgcagggagtcaagatcacgtcactgcactccatcctgggtgac--agcgagaccgtgtctc------------aa-aaaaaaaaaGATTATTAAGCATCTACTTTGGTAaaatg-tgaaggaatgaaacattccaattaaaaggtagagagtatcagactgaatt---------aatttttt-aaa--------atggctcaactatattatgtttgcaagagatgcactgaaagtaaaagaa i cebCap1.NW_016107633v1 I 9 C 0 s aotNan1.NW_018505377v1 342467 358 - 4471408 aggagttcgagatcagcctggccatcatggtgaaaccctgtctctact-aaaatac--aaaaaaatgagccagacat--ggtggcacacacctgtaatcccagctacttgggaggctgaggcaggagaatcgctggaacccaggaggtagaggttgcagtgagtcaggatcacgtcactgca-tccatcctgggtgac--agcgagaccgtgtctc-------------a-aaaaaaaaaGATTATTAAACATCTACTTTGGTAaaatg-tgaaggaatgaaacattccaattaaaatgtagagagtatcagactgaatt---------aatttttttaaa--------atggcccaactatattatgtttacaagagatacactgaaagtaaaagaa i aotNan1.NW_018505377v1 I 9 C 0 s otoGar3.GL873654 5456888 268 + 5549422 --aggttcgaatccagcccgg---gcctgccgaacaacagtgacaact----acag--ccaaaaactagccaggtgttgggtgg-gtg---------tcccagctacttgggaggccgaggcaagagaatcacttaagcccaggagttggaggttgctgtgagctg---tgacaccatggcactctacccagggtgacagcttgaggctctgtctc------aaaaaaaa-aaaaaaaa----------------------------------------------------------------------------gaagc-------a-ga-------agaaaagaataaagactcaactatatgatgttcagaagagat--------agtaaaagaa i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4595690 1181 - 122678785 I e saiBol1.JH378197 5381854 3831 + 8899380 I a score=2272890.000000 s hg38.chr19_GL383574v1_alt 51714 322 + 155864 tagaaaaaggtataccatacaaa-------cagcaataacaagaaaagtgtgtagcatacgttaatatcagacaaaggagcttaaagatcaggatttcttccagaggtaaa----ggttgggggggcgttcttcgtaaagat--aaggatc----agttcatcaagaagatacaacagtcctaaatgtgtaac----ttttataaaacagtatacccaacaattgcagaatattgtttt-----aagtagacatgaactgctcaacaatatagaccaaatgctggaccataaaataagtcacactaaattccaaaaggaataaaatc---------atacatggtatattgttaaac s panTro5.chr19 36120335 329 + 61309027 tagaaaaaggtataccatacaaacagcaatcagcaataacaagaaaagtgtgtagcatacattaatatcagacagaggagcttaaagatcaggatttcttccagaggtaaa----ggttgggggggcgttcttcgtaaagat--aaggatc----agttcctcaagaagatacaacagtcctaaatgtgtaac----ttttataaaacagtatacccaacaattgcagaatattgtttt-----aagtagacatgaactgctcaacaatatagaccaaatgctggaccataaaataagtcacactaaattccaaaaggaataaaatc---------atacatggtatattattaaac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39866293 329 + 64411610 tagaaaaaggtataccatacaaacagcaatcagcaataacaagaaaagtgtgtagcatacattaatatcagacaaaggagcttaaagatcaggatttcttccagaggtaaa----ggttgggggggcgttcttcgtaaagat--aaggatc----agttcatcaagaagatacaacagtcctaaatgtgtaac----ttttataaaacagtatacccaacaattgcagaatattgtttt-----aagtagacatgaactgctcaacaatatagaccaaatgctggaccataaaataagtcacactaaattccaaaaggaataaaatc---------atacatggtatattattaaac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6284132 322 - 8369475 tagaaaaaggtataccatacaaa-------cagcaataacaagaaaagtgtgtagcatacattaatatcagacaaaggagcttaaagatcaggatttcttccagaggtaaa----ggttgggggggtgttcttcgtaaagat--aaggatc----agttcatcaggaagatacaacagtcctaaatgtgtaac----ttttataaaacagtatacccaacaattgcagaatattgtttt-----aagtagacatgaactgctcaacaatatagaccaaatgctggaccataaaataaatcacactaaattccaaaaggaataaaatc---------atacatggtatattattaaac i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30188004 311 + 53671032 tag-aaaaggtataccatgcaaa-------caccaataacaagaaaa--------catacattaatatcagacaaaggagcttaaagatcaggattacctccggagataaagcaggggcgggggttggttcttcataaaggt--aaggatc----aattcatcaggaagctacaacagtcctaaatgtgtaac-----tttataatacagcgtacccaacaattgcagaatattgtttt----------gatctatattgctcaacagtatagatcaaatactggatcataaaataagtcacactaaattccaaaaggaataaaatc---------atacatggtatattcttaaat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34641738 311 + 59248254 tag-aaaaggtataccatgcaaa-------caccaataacaagaaaa--------catacattaatatcagacaaaggagcttaaagatcaggattacctccggagataaagcaggggcgggggttggttcttcataaaggt--aaggatc----aattcatcaggaagctacaacagtcctaaatgtgtaac-----tttataatacagtgtacccaacaattgcagaatattgtttt----------gatctatattgctcaacagtatagatcaaatactggatcataaaataagtcacactaaattccaaaaggaataaaatc---------atacatggtatattcttaaat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4508331 311 - 13342542 tag-aaaaggtataccatgcaaa-------caccaataacaagaaaa--------catacattaatatcagacaaaggagcttaaagatcaggattacctccggaaataaagcaggggcgggggttggttcttcataaaggt--aaggatc----aattcatcaggaagctacaacagtcctaaatgtgtaac-----tttataatacagtgtacccaacaattgcagaatattgtttt----------gatctatattgctcaacagtatagatcaaatactggatcataaaataagtcacactaaattccaaaaggaataaaatc---------atacatggtatattcttaaat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5438810 312 + 7714307 tagaaaaaggtataccatgcaaa-------caccaataacaagaaaa--------catacattaatatcagacaaaggaacttaaagatcaggattacttccggagataaagcaggggcgggggttggttctttataaaggt--aaggatc----aattcatcaggaagctacaacagtcctaaatgtgtaac-----tttataatacagtgtacccaacaattgcagaatattgtttt----------gatctatattgctcaacaatatagatcaaatactggatcataaaataagtcacactaaattccaaaaggaataaaatc---------atacatggtatattcttaaat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29245956 316 + 50890351 tagaaaaaggtataccatgcaaa-------caccaataacaagaaaa--------catacattaatatcagacgaaggaccttaaagatcaggattacttctggagataaagcgggggcgggggttggttcttcataaagtt--aaggatcaattaattcatcaggaagctacaacagtcctaaatgtgtaac-----tttataatacagtgtacccaacaattgcagaatattgtttt----------gatctatattgctcaacaatatagatcaaatactggatcataaaataagtcacactaaattccaaaaggaataaaatc---------atacgtggtatattcttaaat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 869619 309 - 2385121 tag-aaaaggtataccatgcaaa-------caccagtaacaagaaaa--------catacattaatatcagacaaaggagcttaaagatcaggattacttccggagataaagcaggggcgggggttggttcttcataaaggt--aaggatc----aattcatcaggaagctacaatagtcctaaatgtgtaac-----tttataatacagtgtacccaacaattgcagaatattgtttt----------gatctatattgctcaacaatatagatcaaatactggatcataaaataagt--cactaaattccaaaaggaataaaatc---------atacatggtatattcttaaat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2305530 321 + 4274983 tagaaaaaggtataccttgcaaa-------caccaataacaagaaaa--------tacacattaatatcagacaaaggagcttaaagatcaggattacttccagagataaagtgggggtggggggtggttcttcataaaggt--aaggatc----aattcatcaggaagctacaacagtcctaaatgtgtaac-----tttataaaacagtgtacccaacaattgcagaatattgtttt----------gatctatattgctcaacaatatagatcaaatactggaccgtaaaataagtcacactaatttccaaaaggaataaaatcatacatggtatacatggtatattcttaaat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28537050 316 + 49145316 tagaaaagggtataccacaaaaa-------caccaataacaggaagactgtgtgacatacattaatgtcagacaaagcatcttaaagatcaggaatactaacagagataaa----------gggggggtccttcataaagat--gaagatc----aattcatcaggaaaatacaacagtcctaaatgtgtagc----ttttataaaacagtatacccaaaaattgcagaatattgtttt-----aagtagacatggactgctcaacaatatagaccaaatactgcgtcataaaataagtcacactaaattccaaaaggattaagatc---------atacatgatatcttcttaaac i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1591701 315 - 2680843 tggaaaaaggtataccacaaaaa-------caccaataacaggaaaactgtgtgacatacattaatgtcagacaaagcagcttaaagatcaggggtactaacagagataaa-----------ggggcgttcttcataaacgt--gaggatc----aattcatcaggaagatacaacagtcctaaatgtgtaac----ttttataaaacagtatacccaacaattgcagaatattgtttt-----aagtagacatggactgcttaacaatatagaccaaatactgtgccataaaataggtcacactaaattccaaaaggattaaaatc---------atacatgataccttcttaaac i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 342825 317 - 4471408 tagaaaaaggtataccacaaaaa-------caccaataacaggaaaactgtgtgacatacattaatgtcagacaaagcagcttaaagatcaggagtactaacagagataaa-----------ggggggttcttcataaagat--gaggatc----aattcatcaggaagatacaacggtcctaaatgtgtaACT--TTtttataaaacagtatacccaacaattgcagaatattgtttt-----aagtagacatggactgctcaacaatatagaccaaatactgcgccataaaatcagtcacactaaattccaaaaggattaaaatc---------atacaggatatcttcttaaac i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5457156 316 + 5549422 tagaaaaagatatactatgtaaa-------caccagtgacaagaaaactat------tatattaatagcagaccaagcagtgtaaagattacaaatactaccatatat------------gggggagatttttcataaagatgcaaagtat----acttcgtcaggaagctataataatcctaaatgtataAATAAGTtttacaaaacagtgtgtgtagcagttgcagaatattgattctattcaaatagatatggtctgcccaacagtacagatcatatcctg---tataaaacaagttacattaaattctaaaagtattgaaatc---------atacatggtatcatctcAAAC i otoGar3.GL873654 C 0 I 582 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4595690 1181 - 122678785 I e saiBol1.JH378197 5381854 3831 + 8899380 I e nomLeu3.chr10 63877237 0 - 106955855 C a score=890803.000000 s hg38.chr19_GL383574v1_alt 52036 129 + 155864 cacaaaa----taaacttgaaattaataaagttaacttgaaaaatccccagataatttggtatcaagtaaacttgttaatcactaatggatcagaggagaatttacaagggaaattagagaatattttaaatc s panTro5.chr19 36120664 129 + 61309027 cacaaaa----taaacttgaaattaataaagttaacttgaaaaatccccagataatttggtatcaagtaaacttgttaatcactaatggatcagaggagaatttacaagggaaattagagaatattttaaatc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39866622 129 + 64411610 cacaaaa----taaacttgaaattaataaagttaacttgaaaaatccccagataatttagtatcaagtaaacttgttaatcactaatggatcagaggagaatttacaagggaaattagagaatattttaaatc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6284454 128 - 8369475 cacaaaa----taaacttgaaattaataaagttaacttgaaaaatccccagataa-ttagtatcaagtagacttgttaatcactaatggatcagaggagaatttacaagggaaattagagaatattttaaatc i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30188315 128 + 53671032 cacaaaa----taaactttaaattaataaaggtaacttgaaaaatcctcagataatttgatatcaagtaaacttgttaatcactaatagatcaaaggagaattta-aagggagattagagaatatttttaatc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34642049 128 + 59248254 cacaaaa----taaacttgaaattaataaaggtaacttgaaaaatcctcagataatttgatatcaagtaaacttgttaatcactaatagatcaaaggagaattta-aagggagattagagaatatttttaatc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4508642 128 - 13342542 cacaaaa----taaacttgaaattaataaaggtaacttgaaaaatcctcagataatttgatatcaagtaaacttgttaatcactaatagatcaaaggagaattta-aagggagattagagaatatttttaatc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5439122 128 + 7714307 cacaaaa----taaatttgaaattaataaaggtaacttgaaaaatcctcagataatttgatatcaagtaaacttgttaatcactaatagataaaaggagaattta-aagggagattagagaatatttttaatc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29246272 128 + 50890351 cacacaa----taaacttgaaattaataaaggtaacttgaaaaatcctcagataatttgatatcaagtaaacttgttaatcactaatagatcaaaggagaattta-aagagaaatgagagaatatttttaatc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 869928 128 - 2385121 cacaaaa----taaacttgaaattaatcaaggtaacttgaaaaatcctcagataatttgatatcaagtaaacttgttaatcactaatagatcaaaggagaattta-aagggagattagagaatatttttaatc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2305851 128 + 4274983 cacaaaa----taaacttgaaattaataaaggtaacttgaaaaatcctcagataatttgatatcaagtaaacttgttaatcactaatagatcaaaggagaattta-aagggaaattagagaatatttttaatc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28537366 123 + 49145316 cacaaaataattaaacttggaattaataaaggtaacttgaaaaatccccaa----------atcaagtaaacttgttaatcactaatagatcagagaagaatttacaaaggaaattagagaatatttttaatc i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1592016 118 - 2680843 cacaaaataattaaacttggaattaataaaggtaacttgaaaaatccccaa----------atcaagtaaacttgttaatcactaat-----agagaagaatttacaaaggaaattggagaatatttttaaTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 343142 123 - 4471408 cacaaaataattaaacttggaattaataaaagtaacttgaaaaatccccaa----------atcaagtaaacttgttaatcactaatagatcagagaagaatttacaaaggaaattagagaatatttttaaTC i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4595690 1181 - 122678785 I e saiBol1.JH378197 5381854 3831 + 8899380 I e nomLeu3.chr10 63877237 0 - 106955855 C a score=2249385.000000 s hg38.chr19_GL383574v1_alt 52165 293 + 155864 tagaccagatgtgatagcatacacctgtaatcccagcactttgggtggtggccaaggtgggaggatcacttgaggccaggagttcaagaccagcctggggaacatagggagaccttgtctctgc----aaaaaaaaaaaaaaaatttaagtagctgggtgtggttgtacatacctgtagtcctag-cactcaggaggctggggtgggagacttgattgagcccaggaattcaaga------------------ctgcagtgagctgtgattctgctgctgcactccaggaaaggcgacagagctagaccttttctc s panTro5.chr19 36120793 293 + 61309027 tagaccagatgtgatagcatacacctgtaatcccagcactttgggtggtggccaaggtgggaggatcacttgaggccaggagttcaagaccagcctggggaacatagggagaccttgtctctgc----aaaaaaaaaaaaaaaatttaagtagctgggtgtggttgtacatacctgtagtcctag-cactcaggaggctggggtgggagatttgattgagcccaggaattcaaga------------------ctgcagtgagctgtgattctgccgctgcactccaggaaaggtgacagagctagaccttttctc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39866751 284 + 64411610 tagaccagatgtgatagcatacacctgtaatcccagcacttcgggtggtggccaaggtgggaggatcacttgaggc--------caagaccagcctggggaacatagggagaccttgtctctgc-----aaaaaaaaaaaaaaatttaagtagctgggtgtggttgtacatacctgtagtcctag-cactcaggaggctggggtgggagatttgattgagcccaggaattcaaga------------------ctgcagtgagctgtgattctgccgctgcactccaggaaaggtgacagagctagaccttttctc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6284582 296 - 8369475 tagaccagatgtgatagcatacacctgtaatcccagcagtttgggtggtggccaaggtgggaggatcacctgaggccaggagttcaagaccagcctggggaacatagggagaccttgtctctgcaaaaaaaaaaaaaaaaaaaatttaagtagct-ggtgtggttgtacatacctgtagtcctag-cactcaggaggctggggtgggagacttgattgagcccaggaattcaaga------------------ctgcagtgagctgtgattctgccgctgcactccaggaaaggcgacagagctagaccttttctc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63877237 286 - 106955855 taggccgggcacggtggctcacgcttgtaatcccggcacttta---ggaggccgaggcgggcggatcac--gaggtcaggagatcaagacca-cctggctaacatggtgaaaccccgtctctac---taaaaatacaaaaaaaa---aattagccaggcatggtggcgggcacctgtagtcccagccactcgggaggctaaggcaggagaatggtgtgaacccgggaggcggagc------------------ttgcagtgagccgagatcgcaccactgcactccagcctgggcgacagagcaagactctgtctc i nomLeu3.chr10 C 0 I 8 s rheMac8.chr19 30188443 304 + 53671032 taggccaggtgtgatagcatacacctgtaatcccagcactttg---ggtggccaaggtgggaggatcacttgaggccaggagttcaagaccagcctggggaacatagggagaccttgtcactac--------aaaaaaaaaatttttcattagctgggtatggttgtacatacctgtagtcacag-cactcaggaggctgaggtgggagacttgcttgagcccaggaattcaagactgcagtgagctgtgatgctgcagtgagctgtgattctgccactgcacgccagaaaaggcgacagagctagaccttgtctc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34642177 304 + 59248254 taggccaggtgtgatagcatacacctgtaatcccagcactttg---ggtggccaaggtgggaggatcacttgaggccaggagttcaagaccagcctggggaacatagggagaccttgtcactac--------aaaaaaaaaatttttcattagctgggtatggttgtacatacctgtagtcacag-cactcaggaggctgaggtgggagacttgcttgagcccaggaattcaagactgcagtgagctgtgatgctgcagtgagctgtgattctgccactgcactccagaaaaggcgacagagctagaccttgtctc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4508770 304 - 13342542 taggccaggtgtgatagcatacacctgtaatcccagcactttg---ggtggccaaggtgggagaatcacttgaggccaggagttcaagaccagcctggggaacatagggagaccttgtcactac--------aaaaaaaaaatttttcattagctgggtatggttgtacatacctgtagtcacag-cactcaggagactgaggtgggagacttgcttgagcccaggaattcaagactgcagtgagctgtgatgctgcagtgagctgtgattctgccactgcactccagaaaaggcgacagagctagaccttgtctc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5439250 303 + 7714307 taggccaggtgtgatagcatacacctgtaatcccagcactttg---ggtggccaaggtgggaagatcacttgaggccaggagttcaagaccagcctggggaacaaagggagaccttgtcactac--------aaaaaaaaaa-ttttcattagctgggtgtggttgtacatacctgtagtcacag-cactcaggaggctgaggtgggagacttgcttgagcccaggaattcaagactgcagtgagctgtgatgctgcagtgagctgtgattctgccactgcactccagaaaaggcgacagagctagaccttgtctc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29246400 303 + 50890351 taggccaggtgtgatagcatacacctgtaatcccagcactttg---ggtggccaaggtgggaggatcacttgaggccaggagttcaagaccagcctggggaacatagggagaccttgtcactac--------aaaaaaa-aaattttcattagttgggtgtggttgtacatacctgtagtcacag-cactcgggaggctgaggtgggagacttgcttgagcccaggaattcaagactgcagtgagctgtgatgctgcagtgagctgtgattctgccactgcactccagaaaaggcgacagagctagaccttgtctc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 870056 286 - 2385121 taggccaggtgtgatagcatacacctgtaatcccagcactttg---ggtggccaaggtgggaggatcacttgaggccaggagttcaagaccagcctggggaacatagggagaccttgtcactac--------aaaaaaataatttttcattagctgagtatggttgtacatacctgtagtcacag-cactcaggaggctgaggtgggagacttgcttgagcccaggaattcaaga------------------ctgcagtgagctgtgattctgccactgcactccagaaaaggtgacagagctagaccttgtctc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2305979 284 + 4274983 taggccaggtgtgatcgcatacacctgtaatcccagcattttg---ggtggccaaggtgggaggatcacttgaggctaggagttcaagaccagcctggggaacatagggagaccttgtcactac--------aaaaaaaaa--ttttcattagctgggtgtggttgtacatacctgtagtcctag-cactcaggaggctgaggtgggagacttgcttgagcccaggaattcaaga------------------ctgcagtgagctgtgattctgccattgcactccagaaaaggcgacagagctagaccttgtctc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28537489 283 + 49145316 tgggccaggcacgatagcatacacctgtaatctcagcacgttg---ggaggccaaagtgggaggatcacttgaggccaggagttcaagaccagcctggggaacatagagagtcc-tgtctctac---------agaaaaaattttttaattagctgggcatggttgtacatatctgtagtcctag-cactcagaaggctgaggt-ggagaattgattgagcccaggaattcaaga------------------ctgcagtgagctgtgattctgctgctgcacttcaggaaaggtaacagagctagaccttgtctc i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1592134 284 - 2680843 TGggccaggtgcgatagcatacacctgtaatcccagcacgttg---ggaggccaaggtgggaggatcacttgaagccaggagttcaagaccagcctgggaaacagagagagtccttgtctctac---------agaaaaaaatttgtgattagctgggcatggttgtacatgtctgtagtcctag-cactcagaaggctgaggt-ggagaattggttgagcccaggaattcaagc------------------ctgcagtgagctgtgattctgctgctgcactccaggaaaggtagcagagctagaccttgtctc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 343265 284 - 4471408 TGggccaggtgcgatagcatacacctgtaatcccagcatgttg---ggaggccaaggtgggaggatcacttgaggccaggagttcaagaccagtctggggaacatagagagtccttgtctctac---------agaaaaaaatttttaattagctgggcatggttgtacatatctgtagtcctag-cactcagaaggctgaggt-ggagaattgattgagcccaggaattcaaga------------------ctgcagtgagctgtgattctgctgctgcactccaggaaaggtaacagagctagaccttgtctc i aotNan1.NW_018505377v1 C 0 I 2083 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4595690 1181 - 122678785 I e saiBol1.JH378197 5381854 3831 + 8899380 I a score=4530.000000 s hg38.chr19_GL383574v1_alt 52458 1 + 155864 t s panTro5.chr19 36121086 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39867035 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6284878 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63877531 1 - 106955855 a i nomLeu3.chr10 I 8 C 0 s rheMac8.chr19 30188747 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34642481 1 + 59248254 t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4509074 1 - 13342542 t i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29246703 1 + 50890351 t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 870342 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2306263 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28537772 1 + 49145316 t i calJac3.chr22 C 0 I 3 s cebCap1.NW_016107633v1 1592418 1 - 2680843 t i cebCap1.NW_016107633v1 C 0 I 2077 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4595690 1181 - 122678785 I e aotNan1.NW_018505377v1 343549 2083 - 4471408 I e saiBol1.JH378197 5381854 3831 + 8899380 I e cerAty1.NW_012005268v1 5439553 0 + 7714307 C a score=49803.000000 s hg38.chr19_GL383574v1_alt 52459 20 + 155864 aaaaaga-aaaaat--taaatta s panTro5.chr19 36121087 20 + 61309027 aaaaaga-aaaaat--taaatta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39867036 20 + 64411610 aaaaaga-aaaaat--taaatta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6284879 20 - 8369475 aaaaaga-aaaaat--taaatta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63877532 20 - 106955855 aaaaaaa-aaaaaa--aaaatta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30188748 21 + 53671032 taaaaaa-aatgat-atactttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34642482 21 + 59248254 taaaaaa-aatgat-atactttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4509075 21 - 13342542 taaaaaa-aaagat-atactttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5439553 21 + 7714307 taaaaaa-aataac-atatttta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29246704 22 + 50890351 aaaaaaataataat-atatttta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 870343 21 - 2385121 aaaaaaa-aaaaat-atactttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2306264 22 + 4274983 aaaaaaaaaataat-aaatttta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28537776 20 + 49145316 --aaaat-aataataataAATTA i calJac3.chr22 I 3 I 2196 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4595690 1181 - 122678785 I e aotNan1.NW_018505377v1 343549 2083 - 4471408 I e cebCap1.NW_016107633v1 1592419 2077 - 2680843 I e saiBol1.JH378197 5381854 3831 + 8899380 I a score=7784510.000000 s hg38.chr19_GL383574v1_alt 52479 1477 + 155864 aaaaaattttattttcaatttaatgaccagaaagtttgtgggtgtagctaaaacagtgtttagaaaaattttcatagctttaaatacatgtattagaaaacaagaattttcggctgggcgcaatggctcatgcctatgatcccagcactttgggaggctgagatgggcagatcgctt-gaggtcaggagttcaagaccagcctggtcaatgtgataaaaactcgtctctattaaaaatacaaaaattactcaggcgtcttggcatgcgcctgtagtcccagctatttgggaggcggaggcaggagaatcacttgagctggggaggcagaggttgcagtgagccaagatgacgtcactacactccagcctgggtta-cagggcaagactttgtctc-aaataaaaaggaaaagaaaataagaatttttaaaatcagtgctttaagctaccagtttaagaagctaggaaagggccaggtgtggtgtctcccacctgtaatcccagcactttgggaggtcaaggcgggcagattacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctacaaaaatacaaaaattagccaggtatgatggcaggtgcctgtaatcccagctactcaggaggctgaggcaggagaaacgcttgaacccgggaggcggaggttgcagtgagccgagatcacaccattgaactccagcgtgggcgacagaacaagactccatctcacaaaaaaaaaaaaaaaaaaaaa-aaaaaaaaatactaggaaaaatggttagctgggcatggtggtgaatgcccttagtcctaactgcttgggaggctgaagtgggaggattccttgagcccagcagttcaaggttgcagtgaactat---------------gattgtgccactgccttctagcctgggtgacagagtgagaccatgtctc-taagaaaagttggtgaggacgccaggggacagctagg--aaaaaaaatgaaagaaaattattccaaaagtagtagagggggaagaaaataaaaagataagagcagaaatcaatgaagtagaaatagattatattatcagcaaagtcaagagtttgttttgggtggg--------tttttttattttttatttttattttataagattgataagtccctaacaaaactgattaaggaaagaaagaacaaccaagcaagttgccaataccaggaatgaaagagtagacgtcagtatagaccttaaaagaataatatgggaatatatgaa--------tgtcaacaaatgtgatagtttggatgaagtgggcaaatttcttgaaaaatagcaaaccaacacaagaggaaataaaatctcaa-tatctctatatcttctaatgaaattgaaacagtaatttaaaatcacccagaaagaaaattctagactgtttttactgttacattctaccaaacatttagggaagaaataattttcactaatcttacacaaac--tc s panTro5.chr19 36121107 1467 + 61309027 aaaaaattttattttcaatttaatgaccagaaagtttgtgggtgtagctaaaacagtgtttagaaaaattttcatagctttaaatacatgtattagaaaacaagaattttcggctgggcgcaatggctcatgcctatgatcccagcactttgagaggctgagatgggcagatcgctt-gaggtcaggagttcaagaccagcctggtcaatgtgataaaaacccgtctctattaaaaatacaaaaattactcaggcgtcttggcatgcgcctgtagtcccagctatttgggaggcggaagcaggagaatcacttgagctggggaggcagaggttgcagtgagccaagatgacgtcactacactccagcctgggtta-cagggcaagactttgtctc-aaataaaaaggaaaagaaaataagaatttttaaaatcagtgctttaagctaccagtttaagaagctaggaaagggccaggtgtggtgtctcccacctgtaatcccagcactttgggaggtcaaggcgggcagattacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctacaaaaatacaaaaattagccaggtatgatggcaggtgcctgtaatcccagctactcagggggctgaggcaggagaaacgcttgaacccgggaggcggaggttgcagtgagccgagatcacaccactgaactccagcctgggcgacagaacaagactccgtctcac--------aaaaaaaaaaaaa-aaaaaaaaatactaggaaaaatggttagctgggcatggtggtgaatgcccttagtcctaactgcttgggaggctgaagtgggaggattccttgagcccagcagttcaaggttgcagtgaactat---------------gattgtgccactgccttctagcctgggtgacagagtgagaccatgtctc-taagaaaagttggtgaggacgccaggggacagctagg--aaaaaaaatgaaagaaaattattccaaaagtagtagagggggaagaaaataaaaagataagagcagaaatcaatgaaatagaaatagattatattatcagcaaagtcaagagtttgttttgggtggg--------tttttttatttcttatttttattttataagattgataagtccctaacaaaactgactaaggaaagaaagaacaaccaagcaagttgccaataccaggaatgaaagagtagacgtcagtatagaccttaaaagaataatatgggaatatatgaa--------tgtcaacaaatgtgatagtttggatgaagtgggcaaatttcttgaaaaatagcaaaccaacacaagaggaaataaaatctcaa-tatctctatatcttctaatgaaactgaaacagtaatttaaaatcacccagaaagaaaattctagactg--tttactgttacattctaccaaacatttagggaagaaataatttttactaatcttacacaaac--tc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39867056 1465 + 64411610 aaaaaattttattttcaatttaatgaccagaaagtttgtgggtgtagctaaaacagtgtttagaaaaattttcatagctttaaatacatgtattagaaaacaagaattttcggctgggcgcaatggctcatgcctatgatcccagcactttgagaggctgagatgggcagatcgctt-gaggtcaggagttcaagaccagcctggtcaatgtgataaaaacccgtctctattaaaaatacaaaaattactcaggcgtcttggcatgcgcctgtagtcccagctatttgggaggcggaggcgggagaatcacttgagctggggaggcagaggttgcagtgagccaagatgacgtcactacactccagcctgggtta-cagggcaagactttgtctcaaaataaaaaggaaaagaaaataagaatttttaaaatcagtgctttaagctaccagtttaagaagctaggaaagggccaggtgtggtgtctcccacctgtaatcccagcactttgggaggtcaaggcgggcagattacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctacaaaaatacaaaaattagccaggtatgatggcaggtgcctgtaatcccagctactcagggggctgaggcaggagaaacgcttgaacccgggaggcggaggttgcagtgagccgagatcacaccactgaactccagcctgggcgacagaacaagactccgtctca---------acaaaaaaaaaaa-aaaaaaaaaaactaggaaaaatggttagctgggcatggtggtgaatgcccttagtcctaactgcttgggaggctgaagtgggaggattccttgagcccagcagttcaaggttgcagtgaactat---------------gattgtgccactgccttctagcctgggtgacagagtgagaccatgtctc-taagaaaagttggtgaggacgccaggggacagctagg---aaaaaaatgaaagaaaattattccaaaagtagtagagggggaagaaaataaaaagataagagcagaaatcaatgaaatagaaatagattatattatcagcaaagtcaagagtttgttttgggtggg---------ttttttatttcttatttttattttataagattggtaagtccctaacaaaactgattaaggaaagaaagaacaaccaagcaagttgccaataccaggaatgaaagagtagacgtcagtatagaccttaaaagaataatatgggaatatatgaa--------tgtcaacaaatgtgatagtttggatgaagtgggcaaatttcttgaaaaatagcaaaccaacacaagaggaaataaaatctcaa-tatctctatatcttctaatgaaattgaaacagtaatttaaaatcacccagaaagaaaattctagactg--tttactgttacattctaccaaacatttagggaagaaataatttttactaatcttacacaaac--tc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6284899 1468 - 8369475 aaaaaattttattttcaatttaatgaccagaaagtttgtgggtgtagctaaaacagtgtttagaaaaattttcatagctttaaatacatgtattagaaaacaagaattttcggctgggtgcaatggctcatgcctatgatcccagcactttgggaggctgagatgggcagatcacttggaggtcaggagttcaagaccagcctggtcaatgtgataaaaacctgtctctattaaaaatacaaaaattactcaggcgtcttggcatgcgcctgtagtcccagctatttgggaggcggaggcaggagaatcacttgagctggggaggcagaggttgcagtgagccaagatgacgtcactacactccagcctgggttaccagggcaagactttgtctc-aaataaaaaggaaaagaaaataagaatttttaaaatcagtgctttaagctaccagtttaagaagctaggaaagggccagttgtggtgtctcccacctgtaatcccagcactttgggaggtcaaggtgggcagattacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctacaaaaatacaaaaattagccacgtatgatggcaggtgcctgtaattccagctactcaggaggctgaggcaggagaaacgcttgaacccgggaggcggaggttgcagtgagccgagatcacaccattgaactccagcctgggcgacagaacaagactccgtctcaca-------aaaaaaaaaaaaa-aaaaaaaaatagtaggaaaaatggttagctgggcatggtggtgaatgcccttagtcctaactgcgtgggaggctgaagtgggaggattccttgagcccagcagttcaaggttgcagtgaactgt---------------gattgtgccactgccttctagcctgggtgacagagtgagaccatgtgtcttaagaaaagttggtgaggacgccaggggacagctaggaaaaaaaaaatgaaagaaaattattccaaaagtagtagagggggaagaaaataaa-----aagagcagaaatcaatgaaatagaaatagattatattatcagcaaagtcaagagtttgttttgggtggg--------tttttttattttttatttttatttcataagattgataagtccctaacaaaactgattaaggaaggaaagaacaaccaagcaagttgccaataccaggaatgaaagagtagacgtcagtatagaccttaaaagaataatatgggaatatatgaa--------tgtcaacaaatgtgatagtttggatgaagtgggcaaatttcttgaaaaatagcaaaccaaaacaagaggaaataaaatctcaa-tatctctatatcttctaatgaaattgaaacagtaatttaaaatcacccagaaagaaaattctagactg--tttactgttacattctaccaaacatttagggaagaaataatttttactaatcttacacaaac--tc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63877552 1457 - 106955855 aaaaaaaTGTATTTTTAATTTAATGACCAGaaagtttgtgggtgtagctaaaacagtgtttagaaaaattttcatagctttaaatacatgtattagaaaacaagaatttttggccgggcgtggtggctcatgcccatgatcccagcactttgggaggctgagatgagcagatcactt-gaggtcaggagttcaagaccagcctggccaatgtggtaaaaacccgtctctactaaaaatacaaaaattactcaggcgtgttggcatgtgcctgtagtcccagctacttgggaggcggaggcaggagaatcgcttgagctggggaggcagaggttgtagtgagttgagatggcatcactgcaccctagcctgggtga-cagagcaagactttgtctc-aaataaaaaggaaaagaaaataagaatttttaaaatcagtgctctaagctaccagtttaagaagctaggaaagcgccagttgtggtatctcccacctgtaatcccagcactttgggaggtcaaggcgggctgattacctgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccccacctctacaaaaatacaaaaattagccaggtatgatggcaggtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccgcgaggcggaggttgcagtgagccaagatcgcaccattgaactccagcctgggcgacagagcaagactccgtctcat--------aaaaaaaaaaaaa-aaa-------gctaggaaaaatggttagctgggcatggtggtgaatgcccttagtcctaactacttgggaggctgaggtgggaggattccttgagcccagcagttcaaggttgcagtgaattat---------------gattgtgccactgccttctagcctgggtgacagagtgagactatgtctc-taaaacaagttggtgaggacgtcaggggacagctagg---aaaaaaatgaaagacaattattccaaaagtagtagaaggggaagaaaataaaaagataagagcagaaatcaatgaaatagaaatagattata-tatcagcaaagccaagagtttgttttgggtagg---------tttttgttttttggttttttttttataaaattgataagtccctagcaaaactgattaaggaaagaaagaacaaccaagcaagttgtcaataccaggaaggaaagagtagacatcagtatagaccttaaaagaataatatgggaatacacgaa--------tgtcaacaaatgtgatagtttggatgaagtgggcaaatttcttgaaaaatagtaaaccaacacaagaggaaataaaatctcaa-tatctctatatcttctaatgaaattgaaacagtaatttaaaatcactcagaaagaagattctagactg--tttactgttacattctaccaaacatttagggaagaaataatttttactaatcttacacaaac--tc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30188769 1418 + 53671032 aaaataatgtatttttaatttaataaccagaaagtttgtaggtgtagctaaaactgtgtttaggaaaactttcatagc-----------------------------------------acagtggctcgtgcccatgatcccagcactttgggaggctgaggtgggcgggtcactt-gaggtcaggagttcgagaccagcctggccaatgtggtaaaaacccgtctctactaaaaatacaaaaattactcaggcacgttggcatgcacctgtagtcccagcttcttgggaggcggaggcaggagaattggttgagctggggaggaagaggttgcagtgggccgagatggcgtcactgcactccagcctgggtga-cagagcaagact--gtctc-aaataaaaataaaaagaaaataagaattttaaaagtcagtgctctaagctaccagttaaagaagctaggaaaTggccaggtgtggtgtctcccacctgtaatcccagcactttgggaagtcaaggccggcagattacctaaggtcaggagttcgagaccagcctgaccaacattgtgaaacctcatctctacaaaaatacaaaaattagccaggtatgatggcaggtgcctgtaatcccagctactcaggaggctgaggcgggagaatcgcttgaacctg-gaggtggaggttgcagtgagccgagatcgcactgttgaactccagcctagacgacagagcaagactctgtctcac--------aaaaaaaaaaaaa-aaa-------caaaggaaaaaTGGttagctgggcatggtggtgaatgcctgtagtcccaactacttgggagactgaggtgggaggattcctcgagcccagcagttcaaggctgcagtgaactgt---------------gatcgtgccattgcattctagcctgggtgacagagtgacaccatgtctc-taaaaaCAGTTGGTGAGGACGTCAGGGGACagctagg---aaaaaagtgaaagaaaattattccaaaagtagtagagggggaagaaaataaaaagataagagcagaaatcagtaaaatagaaatagattata-tatcagcaaag--acgagtttctttggggtggg--------tttatttatttatt-tatttattttataagattgataagcccctaacaaaactgattaagggaagaaagaagaaccaagcaagttgccaataccaggaatgaaagactagacatcagtgtagaccttaaaagaataatatgggaatatatgaattgctttgtgtcaacaaatgtgatagtttaaatgaagtggacaaatttcttgaaaaataataaaccaacacaagaggaaataaaatctcagttatctctgtatcttttcatgaaattgcaacagtaatttcaaatcacccagaaagaaaattctagactg--tttactgttactttctaccaaacatttagggaagaaataatttttactaatcttacacaaac---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34642503 1418 + 59248254 aaaataatgtatttttaatttaataaccagaaagtttgtaggtgtagctaaaactgtgtttaggaaaactttcatagc-----------------------------------------acagtggctcatgcccatgatcccagcactttgggaggctgaggtgggcgggtcactt-gaggtcaggagttcgagaccagcctggccaatgtggtaaaaacccgtctctactaaaaatacaaaaattactcaggcacgttggcatgcacctgtagtcccagcttcttgggaggcggaggcaggagaattggttgagctggggaggaagaggttgcagtgggccgagatggcgtcactgcactccagcctgggtga-cagagcaagact--gtctc-aaataaaaagaaaaagaaaataagaaTTTTAAAAGTCAGTGCTCTAAGCTACCAGTTTAAGAAGCTAGGAAATggccaggtgtggtgtctcccacctgtaatcccagcactttgggaagtcaaggccggcagattacctaaggtcaggagttcgagaccagcctgaccaacattgtgaaacctcatctctacaaaaatacaaaaattagccaggtatgatggcaggtgcctgtaatcccagctactcaggaggctgaggcgggagaatcgcttgaacctg-gaggtggaggttgcagtgagccgagatcgcactgttgaactccagcctagacgacagagcaagactctgtctcac--------aaaaaaaaaaaaa-aaa-------caaaggaaaaaTGGttagctgggcatggtggtgaatgcctgtagtcccaactacttgggagactgaggtgggaggattccttgagcccagcagttcaaggctgcagtgaactgt---------------gatcgtgccattgcattctagcctgggtgacagagtgacaccatgtctc-taaaaaCAGTTGGTGAGGACGTCAGGGGACagctagg---aaaaaagtgaaagaaaattattccaaaagtagtagagggggaagaaaataaaaagataagagcagaaatcagtgaaatagaaatagattata-tatcagcaaag--atgagtttctttggggtggg--------tttatttatttatt-tatttattttataagattgataagcccctaacaaaactgattaagggaagaaagaagaaccaagcaagttgccaataccaggaatgaaagactagacatcagtgtagaccttaaaagaataatatgggaatatatgaattgctttgtgtcaacaaatgtgatagtttaaatgaagtggacaaatttcttgaaaaataataaaccaacacaagaggaaataaaatctcagttatctctgtatcttttaatgaaattgcaacagtaatttcaaatcacccagaaagaaaattctagactg--tttactgttactttctaccaaacatttagggaagaaataatttttactaatcttacacaaac---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4509096 1422 - 13342542 aaaataatgtatttttaatttaataaccagaaagtttgtaggtgtagctaaaactgtgtttaggaaaactttcatagc-----------------------------------------acagtggctcatgcccatgatcccagcactttgggaggctgaggtgggcgggtcactt-gaggtcaggagttcaagaccagcctggccaatgtggtaaaaacccgtctctactaaaaatacaaaaattactcaggcacgttggcatgcacctgtagtcccagcttcttgggaggcagaggcaggagaattggttgagctggggaggaagaggttgcagtgggccgagatggcgtcactgcactccagcctgggtga-cagagcaagact--gtctc-aaataaaaagaaaaagaaaataagaattttaaaagtcagtgctctaagctaccagtttaagaagctaggaaaTggccaggtgtggtgtctcccacctgtaatcccagcactttgggaagtcaaggcgggcagattacctaaggtcaggagttcgagaccagcctgaccaacattgtgaaacctcatctctacaaaaatacaaaaattagccaggtatgatggcaggtgcctgtaatcccagctactcaggaggctgaggcgggagaatcgcttgaacctg-gaggtggaggttgcagtgagccgagatcgcactgttgaactccagcctagatgacagagcaagactctgtctcac--------aaaaaaaaaaaaa-aaa-------caaaggaaaaaTGGttagctgggcatggtggtgaatgcctgtagtcccaactacttgggagactgaggtgggaggattccttgagcccagcagttcaaggctgcagtgaactgt---------------gatcgtgccattgcattctagcctgggtgacagagtgacaccatgtctc-taaaaaCAGTTGGTGAGGACGTCAGGGGACagctagg---aaaaaagtgaaagaagattattccaaaagtagtagagggggaagaaaataaaaagataagagcagaaatcagtgaaatagaaatagattata-tatcagcaaag--acgagtttctttggggtggg----tttatttatttatttatt-tatttattttataagattgataagcccctaacaaaactgattaagggaagaaagaagaaccaagcaagttgccaataccaggaatgaaagactagacatcagtgtagaccttaaaagaataatatgggaatatatgaattgctttgtgtcaacaaatgtgatagtttaaatgaagtggacaaatttcttgaaaaataataaaccaacacaagaggaaataaaatctcagttatctctgtatcttttaatgaaattgcaacagtaatttcaaatcacccagaaagaaaattctagactg--tttactgttactttctaccaaacatttagggaagaaataatttttactaatcttacacaaac---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5439574 1419 + 7714307 aaaataatgtatttttaatttaatgaccagaaagtttgtaggtgtagctaaaactgtgtttaggaaaactttcatagc-----------------------------------------acggtggctcatgcccatgatcccagcactttgggaggctgaggtgggcgggtcactt-gaggtcaggagttcgagaccagcctggccaatgtggtaaaaacccgcctctactaaaaatacaaaaattactcaggcacgttggcatgcacctgtagtcccagcttcttgggaggcggaggcaggagaattggttgagctggggaggaagaggttgcaatgggccgagatggcgtcactgcactccagcctgggtga-cagagcaagact--gtctc-aaataaaaagaaaaagaaaataagaattttaaaagtcagtgctctaagctaccagtttaagaagctaagaaaGggccaggtgtggtgtctcccacctgtaatcccagcactttgggaggtcaaggcgggcagattacctaaggtcaggagttcgagaccagcctgaccaacattgtgaaacctcatctctacaaaaatacaaaaattagccaggtatgatggcaggtgcctgtaatcccagctactcaggaggctgaggcgggagaatcgcttgaacccg-gaggtggaggttgcagtgagccgagatcgcactgttgaactccagcctagacgacagagcaagactctgtctcac--------aaaaaaaaaaaaacaaa-------GCTAGGAAAAATGGttagctgggcatggtggtgaatgcctgtagtcccaactacttgggagactgaggtgggaggattccttgagcccaacagttcaaggctgcagtgaactgt---------------gatcgtgccattgtattctagcctgggtgacagagtgagaccatgtctc-taaaaaCAGTTGGTGAGGACGTCAGGGGACagctagg---aaaaaagtgaaagaaaattattccaaaagtagtagagggggaagaaaataaaaagataagagcagaaatcagtgaaatagaaatagattata-tatcagcaaag--acgagtttctttggggtggg--------tttttttatttatt-tatttattttataagattgataagcccctaacaaaactgattaagggaagaaagaagaaccaagcaagttgccaataccaggaatgaaagactagacatcagtgtagaccttaaaagaataatatgggaatatatgaattgctttgtgtcaacaaatgtgatagtttaaatgaagtggacaaatttcttgaaaaataataaaccaacacaagaggaaataaaatctcagttatctctgtatcttttaatgaaattgcaacagtaatttcaaatcacccagaaagaaaattctagactg--tttactgttactttctaccaaacatttagggaagaaataatttttactaatcttacacaaac---- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29246726 1424 + 50890351 aaaataatgtatttttaatttaatgaccagaaagtttgtaggtgtagctaaaactgtgtttaggaaaactttcatagc-----------------------------------------acggtggcccatgcccatgatcccagcactttgggaggctgaggtgggcgggtcactt-gaggtcaggagttcgagaccagcctggccaatgtagtaaaaacccatctctactaaaaatacaaaatttactcaggcatattggcatgcacctgtagtcccagcttcttgggaggcggaggcaggagaattggttgagctggggaggaagaggttgcagtgagctgagatggcgtcactgcactccagcctgggtga-cagagcaagact---tctc-aaataaaaagaaaaagaaaataagaattttaaaagtcagtgctctaagctaccagtttaagaagctaggaaaGAgccaggtgtggtgtctcccacctgtaatcccagcactctgggaggtcaaggcgggcggattacctaaggtcaggagttcgagactagcctgaccgacattgtgaaacctcatctctacaaaaatacaaaaattagccaggtatgatggcagatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacctg-gaggtggaggttgcagtgagccaagatcgcactgttgaactccagcctggacgacagagcaagactctgtctcat--------aaaaaaaaaaaaacaaa-------GCTAGGAAAAATGGttagctgggcatggtggtgaatgcctatagtcccaactacttgggagactgaggtgggaggattccttgagcccagcagttcaaggctgcagtgaactgt---------------gatcatgccattgcattctagcctgggtgacagagtgagaccatgtctc-taaaaaCAGTTGGTGAGGACGTCAGGGGACagctagg---aaaaaagtgaaagaaaattattccaaaagtagtagagggggaagaaaataaaaagataagagcagaaatcaatgaaatagaaatagattata-tatcagcaaag--acgagtttcttttgggtggg----gttttttatttatttatt-tatttattttataagattcataagcccctaacaaaactgattaaggaaaggaagaagaaccaagcaagttgccaataccaggaatgaaagactagacatcagtgtagaccttaaaagaataatatgggaatatatgaattgctttatgtcaacaaatgtgatagtttaaatgaagtggacaaatttcttgaaaaataataaaccaacataagaggaaacaaaatctcagttatctctgtatcttttaatgaaattgaaacagtaatttcagatcacccagaaagaaaattctagactg--tttactgttactttctaccaaacatttagggaagaaataatttttactaatcttacacaaactc-- i chlSab2.chr6 C 0 I 15 s manLeu1.NW_012102454v1 870364 1436 - 2385121 aaaataatgtatttttaatttaataaccagaaagtttgtaggtgtagctaaaactgtgtttaggaaaactttcatagc-----------------------------------------acagtggctcatgcccatgatcccagcactttgggaggctgaggtgggcgggtcactt-gaggtcaggagttcgagaccagcctggccaatgtggtaaaaacctgtctctactaaaaatacaaaaattactcaggcacgttggcatgcacctgtagtcccagcttcttgggaggcggaggcaggagaattggttgagctagggaggaagaggttgcagtgggccaagatggcgtcattgcactccagcctgggtga-cagagcaagact--gtctc-aaataaaaagaaaaagaaagtaagaattttaaaagtcagtgctctaagctaccagtttaagaagctaggaaaGggccaggtgtggtgtctcccacctgtaatcccagcactttgggaggtcaaggcgggcagattacctaaggtcaggagttcgagaccagcctgaccaacattgtgaaacctcatgtctacaaaaatacaaaaattagccaggtatgatggcaggtgcctgtaatcccagctactcaggaggctgaggcgggagaatcgcttgaacccg-gaggtggaggttgcggtgagccgagatcgcactgttgaactccagcctagacgacagagcaagacactgtctcac--------aaaaaaaaaaaaaaaaa-------GCTAGGAAAAATGGttagctgggcatggtggtgaatgcctgtagtccaaactacttgggagactgaggtgggaggattccttgagcccagcagttcaaggctgcagtgaactgtgatcgtgccattgcagatcgtgccattgcattctagcctggatgacagagtgagaccatgtctc-taaaaaCAGTTGGTGAGGACGTCAGGGGACagctagg---aaaaaagtgaaagaaaattattccaaaagtagtagaggggaaagaaaataaaaagataagagcagaaatcagtgaaatagaaataaattata-tatcagcaaag--acgagtttctttggggtggg--------tttatttatttatt-tattcattttataagattgataagcccctaacaaaactgattaagggaagaaagaagaaccaagcaagttgccaataccaggaatgaaagactagacatcagtgtagaccttaaaagaataatatgggaatatatgaattgctttgtgtcaacaaatgtgatagtttaaatgaagtggacaaatttcttgaaaaataataaaccaacacaagaggaaataaaatctcagttatctctgtatcttttaatgaaattgcaacagtaatttcaaatcacccagaaagaaaattctagactg--tttactgttcctttctaccaaacatttagggaagaaataatttttactaatcttacacaaactc-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2306286 1421 + 4274983 aaaataatgtattttttatttaatgaccagaaagtttgtaggtgtagctaaaactgtgtttaggaaaactttcatagc-----------------------------------------acggtggctcatgcccatgatcccagcactttgggaggctgaggtgggcgggtcgctt-gaggtcaggagttcgagaccagcctggccaatgtggtaaaaacccgtctctaccaaaaatacaaaaattactcaggcgtgttggcatgcgcctgtagtcccagcttcttgggaggcggaggcaggagaattggttgagctggggaggaagaggttgcagtgagcccagatggcgtcactgcactccagcctgggtga-cagagcaagact--gtctc-aaataaaaagaaaaagaaaataagaattttaaaaatcagtgctctaagctaccagtttaagaagctaggaaaGggccaggtgtggtgtctcctgcctgtaatcctagcactttgggaggtcaaggcaggcggattacctga-gtcaggagttcgagactagcctgaccaacattgtgaaacctcatctctacaaaaatacaaaaattagccaggtatgatggcaggtacctgtaatcccagctactcaggaggctgaggcgggagaatcgcttgaacccg-gaggcggaggttgcagtgagccaagatcgcaccgttgaactccagcctggacgacagagcaagactccatctcac--------acaaaaaaaac---aaa-------gctagaaaaaaTGGttagctgggcatggtggtgaatgcctgtagtcctaactacttgggagactgaggtgggaggattccttgagcccagcagttcaaggctgcagtgaactgt---------------gatcgtgccattgcattctagcctgggtgacagagtgagaccatgtctc-taaaaaCAGTTGGTGAGGACGTCAGGGGACagctagg---aaaaaaatgagagaaaattattccaaaagtagtagaggaggaagaaaataaaaagataagagcagaaatcaatgaaatagaaatagattaca-tatcagcaaag--atgagtttcttttgggtgggtttatttatttgtttatttatt-tatttattttgtaagattgataagccgctaacaaaactgattaaggaaagaaagaagaaccaagcaagttgccaataccaggaatgaaagagtagacatcagtatagaccttaaaagaataatatgggaatatatgaattgctttatgtcaacaaatgtgatagtttgaatgaagtggacaaatttcttgaaaaataataaaccaacacaagaggaaataaaatct--gttatctctgtatcttttaatgaaattgaaacagtaatttcagatcgcccagaaagaaaattctagactg--tttactgttactttctaccaaacatttagggaagaaataatttttactaatcttacacaaac---- i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4595690 1181 - 122678785 I e aotNan1.NW_018505377v1 343549 2083 - 4471408 I e cebCap1.NW_016107633v1 1592419 2077 - 2680843 I e saiBol1.JH378197 5381854 3831 + 8899380 I e calJac3.chr22 28537796 2196 + 49145316 I a score=39010.000000 s hg38.chr19_GL383574v1_alt 53956 11 + 155864 tttcagaTAGC s panTro5.chr19 36122574 11 + 61309027 tttcagaTAGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39868521 11 + 64411610 tttcagaTAGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6286367 11 - 8369475 tttcagaTAGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63879009 11 - 106955855 tttcagaTAGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30190187 9 + 53671032 --tcAGACAGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34643921 9 + 59248254 --tcAGACAGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4510518 9 - 13342542 --tcAGACAGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5440993 9 + 7714307 --tcAGACAGC i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 871800 7 - 2385121 ----agacagc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2307707 9 + 4274983 --tcAGACAGC i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e chlSab2.chr6 29248150 15 + 50890351 I e canFam3.chr1 4595690 1181 - 122678785 I e aotNan1.NW_018505377v1 343549 2083 - 4471408 I e cebCap1.NW_016107633v1 1592419 2077 - 2680843 I e saiBol1.JH378197 5381854 3831 + 8899380 I e calJac3.chr22 28537796 2196 + 49145316 I a score=1672485.000000 s hg38.chr19_GL383574v1_alt 53967 300 + 155864 TATGCACCAtgatgcatgcctgtagtcccagtaactcaggaggctgatgcag--aaggatctcttgagcccaggagttcaaggctgcagtgagccatgattgtgccactgcactccagccaaggcaacagagc-aaaaccctgtctcttaaaaagtaaaaaaagactgggtacggtggctcaaacctgtaatcccagcactttgggaggccgaggcgggcagatcacgaggtcaggagatcgagaccagcccagccaacatggtgaaaccctgtctctactaaaaatac-----aaaaaaaaaaaaat s panTro5.chr19 36122585 301 + 61309027 TATGCACCAtgatgcatgcctgtagtcccagtaactcaggaggctgatgcagaaaaggatctcttgagcccaggagttcaaggctgcagtgagccatgattgtgccactgcactccagccaaggcaacagagc-aaaaccctgtctcttaaaaagtaaaaaaagactgggtacggtggctcaaacctgtaatcccagcactttgggaggccgaggtgggcagatcacgaggtcaggagatcgagaccagcccagccaacatggtgaaaccctgtctctactaaaaatac-----aaaaaaaaaaaaa- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39868532 301 + 64411610 TATGCACCAtgatgcatgcctgtagtcccagtaactcaggaggctgatgcagaaaaggatctcttgagcccaggagttcaaggctgcagtgagccatgattgtgccactgcactccagccaaggcaacagagc-aaaaccctgtctctgaaaaagtaaaaaaagactgggtacggtggctcaaacctgtaatcccagcactttgggaggccgaggtgggcagatcacgaggtcaggagatcgagaccagcccagccaacatggtgaaaccctgtctctactaaaaatac-----aaaaaaaaaaaaa- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6286378 297 - 8369475 TATGCACCAtgatgcatgcctgtagtcccagtaactcaggaggctgatgcag--aaggatctcttgagcccaggagttcaaggctgcagtgagccatgattgtgccactgcactccagccaaggcaacagagc-aaaaccctgtctcttaaaaagtaaaaaa--actgggtacggtggctcaaacctgtaatcccagcactttgggaggccgaggcgggcagatcacgaggtcaggagatcgagaccagcccagacaacatggtgaaaccctgtctctactaagaatac-----aaaaaaaaaaaat- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63879020 296 - 106955855 TATgcaccatgatgcatgcctgtagtcccagtaactcaggaggctgaggcgg--gaggatctcttgagcccaggagttcaaggctgcagtgagccatgatcgtgccactgcactccagccaaggcaacagagc-aaaaccctgtctctt---aaggaaaaaaaggctgggtacggtggctcacacctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccagcccagccaacgtggtgaaaccctgtctctattaaaaatac-----aaaaaaaaaaatt- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30190196 302 + 53671032 TATGCACCATGATACATgcctgtagtcccggtaactcgggaggctgaggcgg--gaggatctcttgagcccaggagtttaaggctgcagtgagccatgatcgtgccactgcactccagccaaggcaacagagcaaaaaccctgtctcttaaaaaggaaaaaaaggctgggtacggtagctcacacctgtattcctagcactttaggaggccgaggtgggcggatcacgaggtcaggagatggagacccgcccggccaacatggagaaaccccgtctctactaaaaatac---aaaaaaaaaaaaaat- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34643930 303 + 59248254 TATGCACCAtgatacatgcctgtagtcccggtaactcgggaggctgaggcgg--gaggatctcttgagcccaggagttcaaggctgcagtgagccatgatcgtgccactgcactccagccaaggcaacagagcaaaaaccctgtctcttaaaaaggaaaaaaaggctgggtacggtagctcacacctgtattcctagcactttaggaggccgaggtgggcggatcacgaggtcaggagatggagacccgcccggccaacatggagaaaccctgtctctactaaaaatac--aaaaaaaaaaaaaaat- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4510527 302 - 13342542 TATGCACCATGATACATgcctgtagtcccggtaactcgggaggctgaggcgg--gaggatctcttgagcccaggagttcaaggctgcagtgagccatgatcgtgccactgcactccagccaaggcaacagagcaaaaaccctgtctcttaaaaaggaaaaaaaggctgggtacggtagctcacacctgtattcctagcactttaggaggccgaggtgggcggatcacgaggtcaggagatggagacccgcccggccaacatggagaaaccccgtctctactaaaaatac---aaaaaaaaaaaaaat- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5441002 304 + 7714307 TATGCACCATGATACATgcctgtagtcccagtaactcgggaggctgaggcgg--gaggatctcttgagcccaggagttcaaggctgcagtgagccatgatcgtgccactgcactccagccaaggcaacagagcaaaaaccctgtctcttaaaaaggaaaaaaaggctgggtacggtagctcacacctgtattcctagcactttaggaggccgaggtgggcggatcacaaggtcaggagatggagacccgcccggccaacatggagaaaccccgtctctactaaaaaaaa-aaaaaaaaaaaaaaaat- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29248165 299 + 50890351 TCTGCACCATGATACATgcctgtagtcccagtaactcgggaggctgaggcgg--gaggatctcttgagcccaggagttcaaggctgcagtgagccatgatcgtgccactgcactccagccaaggcaacagagcaaaaaccctgtctcttaaaaaggaaaaaaaggctgggtacggtagctcacacctgtattcctagcactttaggaggccgaggtgggcggaacacgaggtcaggagatggagacccgcccggccaacatggagaaaccccgtctctactaaaaatac------aaaaaaaaaaat- i chlSab2.chr6 I 15 C 0 s manLeu1.NW_012102454v1 871807 303 - 2385121 tgtgcaccacgatacatgcctgtagtcccagtaactcgggaggctgaggcgg--gaggatctcttgagcccaggagttcaaggctgcagtgagccatgatcgtgccactgcactccagccaaggcaacagagcaaaaaccctgtctcttaaaaaggaaaaaaaggctgggtacggtagctcacacctgtattcctagcactttaggaggccgaggtgggcggatcacgaggtcaggagatggagacccgcccagccaacatggagaaaccccatctctactaaaaatac--aaaaaaaaaaaaaaat- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2307716 305 + 4274983 TATGCACCAtgatacatgcctgtagtcccagtaactcgggaggctgaggtgg--gaggatctcttgagcccgggagttcaaggctgcagtgagccatgatcgtgccactgcactccagccaaggcaacagagcaaaaaccctgtctcttaaaaaggaaaaaaaggctgggtacggtagctcacacctgtattcctagcactttaggaggctgaggtgggcggatcacgaggtcaggagatggagacctgcccagccaacatggagaaaccctgcctctactaaaaatacaaaaaaaaaaaaaaaaat- i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4595690 1181 - 122678785 I e aotNan1.NW_018505377v1 343549 2083 - 4471408 I e cebCap1.NW_016107633v1 1592419 2077 - 2680843 I e saiBol1.JH378197 5381854 3831 + 8899380 I e calJac3.chr22 28537796 2196 + 49145316 I a score=-4468.000000 s hg38.chr19_GL383574v1_alt 54267 1 + 155864 -t s panTro5.chr19 36122886 1 + 61309027 -a i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6286675 1 - 8369475 -t i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30190498 1 + 53671032 -g i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34644233 1 + 59248254 -g i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4510829 1 - 13342542 -g i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5441306 1 + 7714307 -g i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29248464 1 + 50890351 -g i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 872110 1 - 2385121 -g i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2308021 1 + 4274983 -g i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5385685 1 + 8899380 t- i saiBol1.JH378197 I 3831 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4595690 1181 - 122678785 I e aotNan1.NW_018505377v1 343549 2083 - 4471408 I e cebCap1.NW_016107633v1 1592419 2077 - 2680843 I e calJac3.chr22 28537796 2196 + 49145316 I e nomLeu3.chr10 63879316 0 - 106955855 C e panPan2.chr19 39868833 0 + 64411610 C a score=1017799.000000 s hg38.chr19_GL383574v1_alt 54268 153 + 155864 agttgggcatggtggcgcgcgcctgtagtcccagctgctcgggaggctgaggcaggagaatcgcttgagcccaggaggcggaggttacagttagctgagatcgcgccactgcactccagcct-gacgacagagcaagactccatctcaaaaaga s panTro5.chr19 36122887 153 + 61309027 aattgggcatggtggcgcacgcctgtagtcccagctgctcgggaggctgaggcaggagaatcgcttgagcccaggaggcggaggttacagttagctgagatcgcgccactgcactacagcct-gacgacagagcaagactccatctcaaaaaga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39868833 152 + 64411610 cttagggcatggtggcgcacgcctgtagtcccagctgctcgggaggctgaggcaggagaatcgcttgagcccaggaggcggaggttacagttagctgagatcgcgccactgcactacagcct-gacgacagagcaagactccatctcaaaaag- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6286676 153 - 8369475 agttgggcatggtggcgtgcgcctgtagtcccagctgctcgggaggctgaggcaggagaatcgcttgagcccaggaggcggaggttacagttagctgagatcgcgccactgcactccagcct-ggcgacagagcaagactccatctcaaaaaga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63879316 153 - 106955855 agttgggcatgatggcgcatgcctgtagtcccagctgctcgggaggctgaggcaggagaatcgcttgagcccagaaggcggaggttacagtcagccgagatcgtgccactgcacttctgcct-ggctacagagcaagagtccatctcaaaaaga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30190499 153 + 53671032 agttggacatggtggcgtgcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgagccaaggagccggaggttacagtgagccaagatcacaccactgcactccagcct-ggcgacagagcaagactccatctcaaaaaga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34644234 153 + 59248254 agttggacatggtggcgtgcacctgtaatcccagctacttgggaggctgaggcaggagaattgcttgagccaaggagccggaggttacagtgagccaagatcataccactgcactccagcct-ggcgacagagcaagactccatctcaaaaaga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4510830 153 - 13342542 agttggacgtggtggcgtgcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgagccaaggagccggaggttacagtgagccaagatcacaccactgcactccagcct-ggcgacagagcaagactccatctcaaaaaga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5441307 153 + 7714307 agttggacatggtggcgtgcgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgagccaaggagccggaggttacagtgagccaagatcacgccactgcactccagcct-ggcgacagagcaagactccatctcaaaaaga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29248465 153 + 50890351 agttggacatggtggcgtgcgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgagccaaggaggcagaggttacagtgagccaagatcacgcccctgcactccagcct-ggcaacagagcaagacttcctctcaaaaaga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 872111 153 - 2385121 agttggacatggtggcgtgcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgagccaaggagccggaggttacagtgagccaagatcacgccactgcactccagcct-ggcgacagagcaagactccatctcaaaaaga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2308022 153 + 4274983 agttggacatggtggcgtgcacctgtagtccgagctactcaggaggctgaggcaggagaatcacttgagccaaggaggtggaggttacagtgagccaagatcgcgccactgcactccagcct-ggcgacagagcaagactccatctcaaaaaga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28539992 148 + 49145316 AGCTATGCACCAtggtgcatgcctgtggtcccagttgctcggaagactgaggcaggaggatttcttaagtccaggagttcaaggttgcagtgagccatgatggtgccactgtactccagcctgggcaatagagcaaaaccctgtctct------ i calJac3.chr22 I 2196 I 1 s saiBol1.JH378197 5385686 140 + 8899380 agctgtacaccatggtgcatgcctgtagtcccagttgcttggaaggctgaggcaggaggatttcttaagcccaggagttcaaggctgcagttagccatgatggtaccgct--------gcctgggcaacagagcaaaaccctctctct------ i saiBol1.JH378197 C 0 I 1 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4595690 1181 - 122678785 I e aotNan1.NW_018505377v1 343549 2083 - 4471408 I e cebCap1.NW_016107633v1 1592419 2077 - 2680843 I a score=2470.000000 s hg38.chr19_GL383574v1_alt 54421 1 + 155864 a s panTro5.chr19 36123040 1 + 61309027 a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39868985 1 + 64411610 a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6286829 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63879469 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30190652 1 + 53671032 g i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34644387 1 + 59248254 g i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4510983 1 - 13342542 g i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5441460 1 + 7714307 g i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29248618 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 872264 1 - 2385121 g i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2308175 1 + 4274983 g i colAng1.NW_012111697v1 C 0 C 0 s aotNan1.NW_018505377v1 345632 1 - 4471408 a i aotNan1.NW_018505377v1 I 2083 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4595690 1181 - 122678785 I e cebCap1.NW_016107633v1 1592419 2077 - 2680843 I e saiBol1.JH378197 5385826 1 + 8899380 I e calJac3.chr22 28540140 1 + 49145316 I a score=2457929.000000 s hg38.chr19_GL383574v1_alt 54422 256 + 155864 aaaaagaaaattcagagaatacaggaagaggaaatatttgctgaccctataaccaaggccaaataactgaaataccaactgtgactggatcgttacaagaaaattatagatcattgtcccccatgaacataaacgtagtaatgtt----tattagatgtagaagcc----agcacttcagaagaaggattgtatatgatgacaaagatttatctcaggactgcgaagctgcaacatttgaaaatcagttgtaacttaccacgtt s panTro5.chr19 36123041 256 + 61309027 aaaaagaaaattcagagaatagaggaagaggaaatatttgctgaccctataaccaaggccaaataactgaaataccaactgtgactagatcgttacaagaaaattatagatcattgtcccccatgaacataaacgtagtaatgtt----tattagatgtaaaagcc----agcacttcagaagaaggattgtatatgatgacaaaggtttatctcaggactgcgaagctgcaacatttgaaaatcagttgtaacttaccacgtt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39868986 256 + 64411610 aaaaagaaaattcagagaatagaggaagaggaaatatttgctgaccctataaccaaggccaaataactgaaataccaactgtgactagatcgttacaagaaaattatagatcattgtcccccatgaacataaacgtagtaatgtt----tattagatgtagaagcc----agcacttcagaagaaggattgtatatgatgacaaaggtttatctcaggactgcgaagctgcaacatttgaaaatcagttgtaacttaccacgtt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6286830 255 - 8369475 aaaaagaaaattcagagaatagaggaagaggaaatatttgctgaccctataaccaaggccaaataactgaaataccaactgtgactagatcgttacaagaaaattatagatcattgt-ccccatgaacataaacgtagtaatgtt----tattagatgtagaagcc----agcacttcagaagaaggagtgtatatgatgacaaagatttatctcaggactgcgaagctgcaacatttgaaaatcagttgtaacttaccacgtt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63879470 252 - 106955855 aaaaagaaaattcggagaatagaggaagaggaaatatttgctgaccctataaccaaggccaaataactgaaataccaactatgactagatcgttacaagaaaattatcgatcattgtctcccatgaacaaaa----aataatgtt----tattagaagtagaagcc----agcacgtcagaagaaggattgtatatgatgacaaagatttatctcaggactgcgaagctgcaacatttgaaaatcagttgtaacttaccacgtt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30190653 256 + 53671032 aaaaagaaaGttcagagaatagaagaagaggaaatatttgctgaccctataaccaaagccaaataactgaaataccaactatgactagattgttacaagacaattatagagcactgtctcccatgaacataaatgtaagaatgtt----cattagaagtagaaacc----agcacttcagaagaaggattgtatataatgacaaagatttatctcaggactgggaagctgcaacatttgaaaatccgttgtaacttaccacatt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34644388 256 + 59248254 aaaaagaaaGttcagagaatagaagaagaggaaatatttgctgaccctataaccaaagccaaataactgaaataccaactatgactagattgttacaagacaattatagagcactgtctcccatgaacataaatgtaagaatgtt----cattagaagtagaaacc----agcacttcagaagaaggattgtatataatgacaaagatttatctcaggactgggaagctgcaacatttgaaaatccgttgtaacttaccacatt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4510984 256 - 13342542 aaaaagaaaGttcagagaatagaagaagaggaaatatttgctgaccctataaccaaagccaaataactgaaataccaactatgactagattgttacaagacaattatagagcactgtctcccatgaacataaatgtaagaatgtt----cattagaagtagaaacc----agcacttcagaagaaggattgtatataatgacaaagatttatctcaggactgggaagctgcaacatttgaaaatccgttgtaacttaccacatt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5441461 256 + 7714307 aaaaagaaaGttcagagaatagaagaagaggagatatttgctgaccctataaccaaagccaaataactgaaataccaactatgactagattgttacaagacaattatagatcactgtctcccatgaacataaatgtaagaatgtt----cattagaagtagaaacc----agcacttcagaagaaggattgtatataatgacaaagatttatctcaggactgggaagctgcaacatttgaaaatccgttgtaacttaccacatt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29248619 260 + 50890351 aaaaagaaaGttcagagaatagaagaagaggaaatatttgatgactctataaccaaagccaaataactgaaataccaactatgactagattgttacaagaaaattatagatcactgtctcccatgaacataaatgtaagaatgtt----cattagaagtagaaaccagcaagcacttcagaagaaggattgtatataatgacaaagatttatctcaggactgggaagctgcaacatttgaaaatcagttgtaacttaccacatt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 872265 256 - 2385121 aaaaagaaagttcagagaatagaagaggaggaaatatttgctgaccctataaccaaagccaaataactgaaataccaactatgactagattgttacaagacaattatagatcactgtctcccatgaacataaatgtaagaatgtt----cattagaagtagaaacc----agcacttcagaagaaggattgtatataatgacaaagatttatctcaggactgggaagctgcaacatttgaaaatccgttgtaacttaccacatt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2308176 256 + 4274983 aaaaagaaaGttcagagaatagaggaagaagaaatatttgctgaccctataaccaaagccaaataactgaaataccaactataactagattgttataagaaaattatagatcactgtctcccatgaacataaatgtaagaatgtt----cattagaagtagaggcc----agcacttcagaagaaggattgtatataatgacaaagatttatcttaggactgcaaagctgcaacatttgaaaatcagttgtaacttaccacatt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28540141 260 + 49145316 aaaaagaaaaCTTagaaaatagagaaagaggaagtatttactgatcctataagcaaggcaaaataactaaaataccaactatgactagattgctacaagaaaattatagatcactatctctcatgtatataaatgtaataatgtttaactattaaaagcagaagcc----agcaattcagaagaaggattgtacataatgacaaagatttatctcaggactgcaaaggtgcaacatttggaaatcagctgtaactcaccacatt i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5385827 258 + 8899380 aaaaagaaaac--agagaatagagaaagaggaagtatttactgacccgataagcaaggcaaaataactaaaataccaactatgactagattgctacaagaaaattatagatcactgtctctcatgtacataaatataataatgtttaactatgagaagcagaagcc----agcaattcagaagaaggattgtacataatgacaaagatttatctcaggactgcaaagctgcaacatttgaaaatcagttgtaactcaccacatt i saiBol1.JH378197 I 1 C 0 s cebCap1.NW_016107633v1 1594496 259 - 2680843 aaaaagaaaaCTTagagagcagagaaagaggaagtatttactgacccgataagcaaggcaaaataactaaaataccaactatgactagattgctacaagaaaattatagatcactgtctctcatgtacataaatgtaataatgtttaactattagaagcagaagcc----agcaattcagaagaaggattgtacataatgacaaagatttatctcaggactgc-aagctgcaacatttgaaaatcagttgtaactcaccacatt i cebCap1.NW_016107633v1 I 2077 C 0 s aotNan1.NW_018505377v1 345633 260 - 4471408 aaaaaaaaaacttagagaatagagaaagaggaagtatttattgacctgataagcaagacaaaataactaaaataccaactatgactagattgctacaagaaaattatagatcgctgtctctcatgtacataaatgtaataatgcttaactattagaagcagaagcc----agcaattcagaagaaggattatacataatgacaaagatttatctcaggactgcaaagctgcaacatttgaaaatcagttgtaactcaccacatt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4595690 1181 - 122678785 I a score=1892487.000000 s hg38.chr19_GL383574v1_alt 54678 185 + 155864 aacagaccaggaataaagaatagagaatccagaaat---------agacccactcagatac----ttaaaacagag--taccaagacagttcaatggagagaaaagacattgttttaacaagaggtgttgcagcagctgtttatctgtgg-aaa-aaataaaacttgacccctggcttaaactataaattaaaaataatttg s panTro5.chr19 36123297 185 + 61309027 aacagaccaggaataaagaatagagaatccagaaat---------agacccactcagatac----ttaaaacagag--taccaagacagttcaatggagagaaaagacattgttttaacaagaggtgttgcagcagctggttatctgtgg-aaa-aaataaaacttgacccctggcttaaactataaattaaaaataatttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39869242 185 + 64411610 aacagaccaggaataaagaatagagaatccagaaat---------agacccactcagatac----ttaaaacagag--taccaagacagttcaatggagagaaaagacattgttttaacaagaggtgttgcagcagctggttatctgtgg-aaa-aaataaaacttgacccctggcttaaactataaattaaaaataatttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6287085 178 - 8369475 aacagaccaggaataaagaatagagaatccagaaat---------agacccactcagatac----ttaaa--agag--tgccaagacagttcaatggagagaaaagac--tgttttaacaagaggtgttgcagcagctggttatctgtgg-aaa-aaataaaacttgacccctggcttaaactataaatt---aataatttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63879722 186 - 106955855 aacagaccaggaataaagaatagagaatccagaaat---------agacccactcagatac----ttaaaacagag--taccaagacagttcaatggagagaaaagacattgttttaacaagggatgttgcagcagctggttatctgtggaaaa-aaataaaacttgacccctggcttaaattataaattaaaaataatttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30190909 185 + 53671032 aacagaccaggaataaagaatagagaatccagaaat---------agacccactcaaatac----ttacaacagag--taacaagacagttcaatggagagaaaagacattgttataataaggggtgttgcagcagctggttatctgtgg-aaa-aaataaaacttgacacctggcttaaactataaattaaaagtaatttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34644644 185 + 59248254 aacagaccaggaataaagaatagagaatccagaaat---------agacccactcaaatac----ttataacagag--taacaagacagttcaatggagagaaaagacattgttataataaggggtgttgcagcagctggttatctgtgg-aaa-aaataaaacttgacacctggcttaaactataaattaaaaataatttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4511240 185 - 13342542 aacagaccaggaataaagaatagagaatccagaaat---------agacccactcaaatac----ttacaacagag--taacaagacagttcaatggagagaaaagacattgttataataaggggtgttgcagcagctggttatctgtgg-aaa-aaataaaacttgacacctggcttaaactataaattaaaaataatttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5441717 185 + 7714307 aacagaccaggaataaagaatagagaatccagaaat---------agacccactcaaatac----ttacaacagag--taacaagacagttcaatggagagaaaagacattgttataataaggggtgttgcagcagctggttatctgtgg-aaa-aaataaaacttgacacctggcttaaactataaattaaaaataatttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29248879 185 + 50890351 aacagaccaggaataaagaatagagaatccagaaat---------agacccactcgaatac----ttacaacagag--taacaagacagttcaatggagagaaaagacattgttataataaggggtgttgcagcagctggttatctgtgg-aaa-aaataaaacttgacacctggcttaaactataaattaaaaataatttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 872521 185 - 2385121 aacagaccaggaataaagaatagagaatccagaaat---------agacccactcaaatac----ttacaacagag--taacaagacagttcaatggagagaaaagacattgttataataaggggtgttgcagcagctggttatctgtgg-aaa-aaataaaacttgacacctggctttaactataaattaaaaataatttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2308432 185 + 4274983 aacagaccaggaataaagaatagagaatccagaaat---------agacccactcaaatac----ttaaaacagag--taacaagacagttcaatggagagaaaagacattgttataataaggggtgttgcagcagctggttatctgtgg-aaa-aaataaaacttgacccctggcttaaattgtgaattaaaaataatttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28540401 182 + 49145316 aacagacaaggaataaagaatagagaatccagaaat---------agacccactcaaatac--------aacagag--taccaagactgttcagtggtgagagaagacattgttttaacagggggtgttgcagcagctggttatctgtgg-aaagaaataaaccttgacccctggtttaaactataaatttaaaataatttg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5386085 190 + 8899380 aacagacaaggaataaagaatagagaatccagaaatccagaatccagacccactcaaatac--------aacggag--taccaagactgttcagtgacgagagaagacattgttttatcaaggggtgttgcagcagctggttgtctgtgg-aaa-aaataaaccttgacccctggcttaaactataaatttaaaataatttg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1594755 181 - 2680843 aacagacaaggaataaagaatagagaatccagaaat---------agacccactcaaatac--------aacggag--taccaacactgttcagttgtgagagaagacattgttttaacaaggggtgttgcagcagctggttatccgtgg-aaa-aaataaaccttgacccctgtcttaaactataaatttaaaataatttg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 345893 181 - 4471408 aacagaCAAGGAATAAagaatagagaatccagaaat---------agacccactcaaatac--------aacagag--taccaagactgttcagtggcaggagaagacattgtattaataaggggtgttgcagcagctggttatctgtgg-aaa-aaataaaccttgacccctggcttaaactataaatttaaaataatttg i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4596871 180 - 122678785 aatagaccggaagtaaagaatagagcatacagaaat---------ag----acttaaatactgatttaaaacagagatggccagtgcagttcaatggagag-ggggaaatatccttaaccaataatgttccgatatctactta------g-aaa-aaattaaccttggttcctacctcacaccatatgtaaaaaacaattTG i canFam3.chr1 I 1181 I 210 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I a score=552544.000000 s hg38.chr19_GL383574v1_alt 54863 58 + 155864 gaatagattatagacataaatTGGTAGTAGAATTGGAGTAGAGCGAGGGGGGTGTGGC s panTro5.chr19 36123482 58 + 61309027 gaatagattatagacataaatTGGTAGTAGAATTGGAGTAGAGCGAGGGGGGTGTGGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39869427 58 + 64411610 gaatagattatagacataaatTGGTAGTAGAATTGGAGTAGAGCGAGGGGGGTGTGGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6287263 58 - 8369475 gaatagattatagacataaatTGGTAGTAGAATTGGAGTAGAGCGAGGGGGGTGTGGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63879908 58 - 106955855 gaatagattatagacataaatTGGTAGTAGAATTGGAGTAGAGGGAGTAGAGGGTGGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30191094 58 + 53671032 aaatagattatagacataaatTGGTAGTAGAATTGGAGTAGAGGGAGGGGTATGTGTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34644829 58 + 59248254 aaatagattatagacataaatTGGTAGTAGAATTGGAGTAGAGGGAGGGGTATGTGTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4511425 58 - 13342542 aaatagattatagacataaatTGGTAGTAGAATTGGAGTAGAGGGAGGGGTATGTGTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5441902 58 + 7714307 aaatagattatagacataaatTGGTAGTAGAATTGGAGTAGAGGGAGGGGTATGTGTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29249064 58 + 50890351 gaatagattatagacataaatTGGTAGTAGAATTGGAGTAGAGGGAGGGGTATGTGTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 872706 58 - 2385121 aaatagattatagacataaatTGGTAGTAGAATTGGAGTAGAGGGAGGGGTATGTGTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2308617 58 + 4274983 gaatagattatagacataaatTGGTAGTAGAATTGGAGTAGAGGGAGGGGTATGTGTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28540583 58 + 49145316 gaatagattgttgacataaatTGGTAGTAGAATTGGGATAGAGGGAGGGGTGTATGGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5386275 58 + 8899380 gaatagattgtttacataaatTGGCAGTAGAATTGGGATAGAGGGAGGGGTGTATGGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1594936 58 - 2680843 gaatcgattgttgacgtaaatTGGTAGTAGAATTGGGATAGAAGGAGGGGTGTATGGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 346074 58 - 4471408 gaatagattgttgacataaatTGGTAGTAGAATTGGGATAGAGGGAGGGGTGTATGGC i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4597051 210 - 122678785 I a score=1243585.000000 s hg38.chr19_GL383574v1_alt 54921 120 + 155864 ACGATCAGGAACTCACGGAAGAGATT--TGCTCTAACCATTGAATG-CGTAATCCAGAGGACAAGCAATGGGAGGCCAAGCCAGGTGAGGAAACACAGAGCAGCCTGGAGATGCAAATATACA--- s panTro5.chr19 36123540 120 + 61309027 ATGATCAGGAACTCACGGAAGAGATT--TGCTCTAACCATTGAATG-CGTAATCCAGAGGACAAGCAATGGGAGGCCAAGCCAGGTGAGGAAACACAGAGCAGCCTGGAGATGCAAATATACG--- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39869485 120 + 64411610 ATGATCAGGAACTCACGGAAGAGATT--TGCTCTAACCATTGAATG-CGTAATCCAGAGGACAAGCAATGGGAGGCCAAGCCAGGTGAGGAAACACAGAGCAGCCTGGAGATGCAAATATACG--- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6287321 120 - 8369475 ATGATCAGGAACTCACAGAAGAGATT--TGCTCTAACCATTGAATG-CATAATCCAGAGGACAAGCAATGGGAGGCCAAGCCAGGTGAGGAAACACAGAGCAGCCTGGAGATGCAAATATACA--- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63879966 120 - 106955855 ATGATCAGGAACTCACGGAAGAGATT--TGCTCTAACCATTAAATG-CATAATCCAGAGGACAAGCAATGGGAGGCCAAGCCAGGTGAGGAAACATAGAGCAGCCTGGAGATGCAAATATACA--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30191152 120 + 53671032 ATGATCAGGAACTCACGTAAGAGATT--TGCTCTAACCATTGAATG-TGTAATCCAGAGGACAAGCAATGGCAGGCCAAGCCAGGTGAGGAAACACAGAGCAGCATGGAGATGGAAACATACA--- i rheMac8.chr19 C 0 I 2 s macFas5.chr19 34644887 120 + 59248254 ATGATCAGGAACTCACGTAAGAGATT--TGCTCTAACCATTGAATG-CGTAATCCAGAGGACAAGCAATGGGAGGCCAAGCCAGGTGAGGAAACACAGAGCAGCATGGAGATGGAAACATACA--- i macFas5.chr19 C 0 I 2 s macNem1.NW_012011689v1 4511483 120 - 13342542 ATGATCAGGAACTCACGTAAGAGATT--TGCTCTAACCATTGAATG-CGTAATCCAGAGGACAAGCAATGGGAGGCCAAGCCAGGTGAGGAAACACAGAGCAGCATAGAGATGGAAACATACA--- i macNem1.NW_012011689v1 C 0 I 2 s cerAty1.NW_012005268v1 5441960 120 + 7714307 ATGATCAGGAACTCACGTAAGAGATT--TGCTCTAACCATTGAATG-CGTAATCCAGAGGACAAGCAATGGGAGGCCAAGCCAGGTGAGGAAACACAGAGCAGCATGGAGATGGAAACATACA--- i cerAty1.NW_012005268v1 C 0 I 2 s chlSab2.chr6 29249122 120 + 50890351 ATGATCAGGAACTCACGGAAGAGATT--TGCTCTAACCATTGAGTG-CGTAATCCAGAGGACAAGCAATGGGAGGCCAAGCCAGGTGAGGAAACACAGAGCAGCATGGAGATGGAAACATACA--- i chlSab2.chr6 C 0 I 2 s manLeu1.NW_012102454v1 872764 120 - 2385121 ATGATCAGGAACTCACGTAAGAGATT--TGCTCTAACCATTGAATG-CGTAATCCAGAGGACAAGCAATGGGAGGCCAAGCCAAGTGAGGAAACATAGAGCAGCATGGAGATGGAAACATACA--- i manLeu1.NW_012102454v1 C 0 I 2 s colAng1.NW_012111697v1 2308675 120 + 4274983 ATGATCAGGAACTCACAGAAGAGATT--TGCTCTAACCATTGAATG-CGTAATCCAGAGGACAAGTAATGGGAGGCCAAGCCAGGTGAGGAAACACAGAACAGCATGGAGATGGAAACATACA--- i colAng1.NW_012111697v1 C 0 I 2 s calJac3.chr22 28540641 120 + 49145316 ATGATCAGGAAATCACAGAAGAGGTT--TGCTTTAATCATTGAATG-TGTAATCCAGAGGACAAGCAATGGGAGGCCAAGCCAGGTGAGGAAGCACAGAGCAGCACAGAGATACAAATATACA--- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5386333 118 + 8899380 ATGATCAGGAAATCACAGAAGAGGTT--TCCTTTAATCATTGAATGTTGTAATCCAGAGGACAAGCAATGGGGGGCCAAGCCAGGTGAGGAAGCACAG---AGCACAGAGATACAAATATACA--- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1594994 120 - 2680843 GTGATCAGGAAATCACAGAAGAGGTT--TGCTTTAATCATCGAATG-TGTAATCCAGAGGACAAGCAATGGGAGGCCAAGCCAGGTGAGGAAGCACAGAGCAGCACAGAGATACAAATATACA--- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 346132 120 - 4471408 ATGATCAGGAAATTACAGAAGAGGTT--TGCTTTAATCATTGAATG-TGTAATCCAGAGGACAAGTAATGGAAGGCCAAGCCAGGTGAGGAAGCACAGAGCAGCACAGAGATACAAATATACA--- i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4597261 123 - 122678785 AGAGTAAGGAACTCAGAAAAGAGATGGAGGAAATAAAAATAGAGTT-TGCTAATCAGAGAGCAAGCAGTGGGAGGTTAGAGGAGGTGGAGAA--ACAAAGCAGCATGGAGATAAGACTGTATATCA i canFam3.chr1 I 210 C 0 e proCoq1.NW_012149263v1 559134 2023 + 2501019 I e micMur3.chr22 3944151 1180 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I a score=2219612.000000 s hg38.chr19_GL383574v1_alt 55041 193 + 155864 TCAAAGTGGCTGATGTCTTGGTCATCACCCAGGAATACTAGAAATAACTGGATGGGTTCTACTCCCCACAGAATTCTTGAAAGCGCTAGTCCCC------------ACATTACCG-GGATATTGTGGGAAGTTGTATTAGGCTTCTCCTGAGCTTACTGGAGCTGCAGCCAGACTGGACTGCACCTCCAA-GGGAGTCCCAGTGGCT s panTro5.chr19 36123660 193 + 61309027 TCAAAGTGGCTGATGTCTTGGTCATCACCCAGGAATACTAGAAATAACTGGATGGGTTCTACTCCCCACAGAATTCTTGAAAGCGCTAGTCCCC------------ACATTACCG-GGATATTGTGGGAAGTTGTGTTAGGCTTCTCCTGAGCTTACTGGAGCTGCAGCCAGACTGGACTGCACCTCCAA-GGGAGTCCCAGTGGCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39869605 193 + 64411610 TCAAAGTGGCTGATGTCTTGGTCATCACCCAGGAATACTAGAAATAACTGGATGGGTTCTACTCCCCACAGAATTCTTGAAAGCGCTAGTCCCC------------ACATTACCG-GGATATTGTGGGAAGTTGTGTTAGGCTTCTCCTGAGCTTACTGGAGCTGCAGCCAGACTGGACTGCACCTCCAA-GGGAGTCCCAGTGGCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6287441 193 - 8369475 TCAAAGTGGCTGATGTCTTGGTCATCACCCAGGAATATTAGAAATAACTGGATGGGTTCTACTCCCTACAGAATTCTTGAAAGCGCTAGTCCCC------------ACATTACCG-GGATATTGTGGGAAGTTGTGTTAGGCTTCTCCTGAGCTTACTGGAGCTGCAGCCAGACTGGACTGCACCTCCAA-GGGAGTCCCAGTGGCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63880086 193 - 106955855 TCAAAGTGGCTGATGTCTTGGTCATCATCCAGGAATACTAGAAATAACTGGATGGGTTCTACTCCCCACAGAATTCTTGAAAGCACCAGTCCCC------------ACATTACCG-GGATATTGTGGGAAGTTGTGTTAGGCTTCTCCTGAGCTTACTGGAGCTGCAGCCAGGCTGGATTGCACCTCGTG-GAATTCCCCAGTGGCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30191274 193 + 53671032 TCAAAGTGGCTGATGTCTTGGTCATCGCCTAAGAATACTAGAAATAACTGGATGGGTTCTACTCCCTACAGAATTCTTGAAAGCACCAGTCCCT------------ACATTTCTG-GGATATTATGGGTAGTTGTGTTAGGCTTCTCCTGAGCTTACTGGAGCTCTAGCCAGACTGGATTTCACCTTCAA-GGGAGTCCCACTAGCT i rheMac8.chr19 I 2 C 0 s macFas5.chr19 34645009 193 + 59248254 TCAAAGTGGCTGATGTCTTGGTCATCGCCTAAGAATACTAGAAATAACTGGATGGGTTCTACTCCCTACAGAATTCTTGAAAGCACCAGTCCCT------------ACATTTCTG-GGATATTATGGGTAGTTGTGTTAGGCTTCTCCTGAGCTTACTGGAGCTCTAGCCAGACTGGATTTCACCTTCAA-GGGAGTCCCACTAGCT i macFas5.chr19 I 2 C 0 s macNem1.NW_012011689v1 4511605 193 - 13342542 TCAAAGTGGCTGATGTCTTGGTCATCGCCTAAGAATACTAGAAATAACTGGATGGGTTCTACTCCCTACAGAATTCTTGAAAGCACCAGTCCCT------------ACATTTCTG-GGATATTATGGGTAGTTGTGTTAGGCTTCTCCTGAGCTTACTGGAGCTCTAGCCAGACTGGATTTCACCTTCAA-GGGAGTCCCACTAGCT i macNem1.NW_012011689v1 I 2 C 0 s cerAty1.NW_012005268v1 5442082 193 + 7714307 TCAAAGTGGCTGATGTCTTGGTCATCGCCTAAGAATACTAGAAATAACTGGATGGGTTCTATTCCCTACAGAATTCTTGAAAGCACCAGTCCCT------------ACATTTCTG-GGATATTATGGGTAGTTGTGTTAGGCTTCTCCTGAGCTTACTGGAGCTCTAGCCAGACTGGATTTCACCTTCAA-GGGAGTCCCACTAGCT i cerAty1.NW_012005268v1 I 2 C 0 s chlSab2.chr6 29249244 193 + 50890351 TCAAAGTGGCTGATGTCTTGGTCATTGCCTAAGAACACTAGAAATAACTGGATGGGTTCTACTCCCTACAGAATTCTTGAAAGCACCAGTCCCT------------ACATTTCTG-GGATATTATGGGTAGTTGTGTTAGGCTTCTCCTGAGCTTACTGGAGCTCTAGCCAGACTGGATTTCACCTTCAA-GGGAGTCCCAGTAGCT i chlSab2.chr6 I 2 C 0 s manLeu1.NW_012102454v1 872886 193 - 2385121 TCAAAGTGGCTGATGTCTTGGTCATCGCCTAAGAATACTAGAAATAACTGGATGGGTTCTACTCCCTACAGAATTCTTGAAAGCACCAGTCCCT------------ACATTTCTG-GGATATTATGGGTAGTTGTGTTAGGCTTCTCCTGAGCTTACTGGAGCTCTAGCCAGACTGGATTTCACCTTCAA-GGGAGTCCCGCTAGCT i manLeu1.NW_012102454v1 I 2 C 0 s colAng1.NW_012111697v1 2308797 193 + 4274983 TCAAAGTGGCTGATGTCTTGGTCATCGCCCAAGAATACTAGAAATAACTGTATGGGTTCTACTCCCTACAGAATTCTTGAAAGCACCAGTCCCT------------ACATTTCTG-GGATATTATGGATAGTTGTGTTAGGCTTCTCCTGAGCTTACTGGAGCTCTAGCCAGACTGAATTTCACCTTCAA-GGGAGTCCCAGTAGCT i colAng1.NW_012111697v1 I 2 C 0 s calJac3.chr22 28540761 180 + 49145316 TCAGTGTGACTGATGTCTTGGTCATTGCCCAGGAATACTAGAAATAATTGGATGGGTTCAACTTCCCACAGAATTCTTGAAAGCACCAGTCCCC------------GCATTTCCG-GGATATTGTGGGAACTTGTGTTAG-------------CTACTGGAGCTGCAGCCACACTGGATTGCACCCTCAA-GGTAGTCTCAGTGGCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5386451 192 + 8899380 TCAGAGTGACTGATGTCTTGGTCATTGCCCAGGAATACTAGAAATACTTGGATGGGTTCAAATTCCCACAGAATTCTTGAAAGCACCAGTCCCCCACCACCCCCCGGCATTTCCA-GGATATTGTGGGAACTTGTGTTAG-------------CTACTGCAGCTGCAACCACACTGGATTGTACCCTCGG-GGTAGTCTCAGTGGCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1595114 178 - 2680843 ACA-TGTGACTGATGTCTTGGTCATTGCCCAGGAATACTAGAAATAATTGGATGGGTTCAACTTCCC-CAGAATTCTTGAAAGCACCAGCTCCT------------GCATTTCCG-GGATGTTGTGGGAACTTGTGTTAG-------------CTACTGGAGCTGCAGCCACACTGGATTGCACCCTCAA-GGTAGTCTCAGTGGCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 346252 180 - 4471408 TCAGTGTGACTGATGTCTTGGTCATTGCCCAGGAATACTAGAAATAATTGGATGGGTTCAACTTCCCACAGAATTCTTGAAAGCACCAGTCCCC------------GCATTTCCA-GGATATTGTGGGAACTTGTATTAG-------------CTACTGGAGCTGCAGCCACACTGGATTGCACCCTCAA-GGTAGTCTCAGTGGCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3945331 195 - 30143674 TCAGAGTGGCTTAAGTCTTGGTCATTATCCAGGAATACTAGAGCTAATGGAGTGGGTTCAGCTTCCCACAGAACAATTGAAAGCACTAATCCCA------------GCATTCCTGAGGAGGTTGTGGGAGGTTCTGTTCGGCCTCTCCTGACCTTGCTGTACCTGCAGCCTGACTGGATTGCACCTCTAAGGGCGGTCCCAGTGGCT i micMur3.chr22 I 1180 C 0 s proCoq1.NW_012149263v1 561157 194 + 2501019 TCAAAGTGGCTTAAGTCTTGGTCATTGTCCAGGAATACTAGAGATAAAGGGGTAGGCTCAGCTTCCCACAGAACTATCGAAAGCACTAATCCCA------------ACATTTCTGAGGATGTTGTGGGAGGTTCTGTTAGGCCTCTCCTGGGCTTGCTGGAGCTGCAGCCTGACTGGATTGCGTCTCTGA-GCCTGACCCAGTGGCT i proCoq1.NW_012149263v1 I 2023 C 0 s canFam3.chr1 4597384 171 - 122678785 TCAGAGTGGCTTATGTCTTGGTCATTGCCCAGAAAAACTAGTGATAATGGGATGGA--------------------TTGCGAGCATTAGTCCCC------------ACATTTCTG-G--CAATGTGGGAGGTTATGTTGGGCCTCTCCTGAGCTGGCGAGGTCTCTAGCCTAACTAGATTACACCTTCAA-GGGAGTCCCATTGATT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I a score=242532.000000 s hg38.chr19_GL383574v1_alt 55234 22 + 155864 CCCCTTGTCTA--------AGATACTGTGC s panTro5.chr19 36123853 22 + 61309027 CCCCTTGTCTA--------AGATACTGTGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39869798 22 + 64411610 CCCCTTGTCTA--------AGATACTGTGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6287634 22 - 8369475 CCCCTTGTCTA--------AGATACTGTGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63880279 20 - 106955855 CCCCTTGTCTA----------ATACTGTGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30191467 30 + 53671032 CCCCTTGTCTAAGATACTAAGATACTGTGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34645202 30 + 59248254 CCCCTTGTCTAAGATACTAAGATACTGTGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4511798 30 - 13342542 CCCCTTGTCTAAGATACTAAGATACTGTGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5442275 30 + 7714307 CCCCTTGTCTAAGATACTAAGATACTGTGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29249437 30 + 50890351 CCCCTTGTCTAAGATACTAAGATACTGTGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 873079 30 - 2385121 CCCCTTTTCTAAGATACTAAGATACTGTGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2308990 30 + 4274983 CCCCTTGTCTAAGATACTAAGATACTGTGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28540941 22 + 49145316 CCCATTGtctg--------agatgctgtgc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5386643 22 + 8899380 CCCATTGtctg--------agatactgtgc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1595292 22 - 2680843 CCCATTGtctg--------agatactgtgc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 346432 22 - 4471408 CCCATTGtctg--------agatactgtgc i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3945526 22 - 30143674 CCCATTGtctg--------ggatactgtgc i micMur3.chr22 C 0 I 475 s proCoq1.NW_012149263v1 561351 22 + 2501019 CCCAGTGtctg--------ggatactgtgc i proCoq1.NW_012149263v1 C 0 C 0 e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4597555 0 - 122678785 C a score=100354.000000 s hg38.chr19_GL383574v1_alt 55256 9 + 155864 TGCTTTCTG s panTro5.chr19 36123875 9 + 61309027 TGCTTTCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39869820 9 + 64411610 TGCTTTCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6287656 9 - 8369475 TGCTTTCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63880299 9 - 106955855 TGCTTTCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30191497 9 + 53671032 TGTTTTCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34645232 9 + 59248254 TGTTTTCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4511828 9 - 13342542 TGTTTTCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5442305 9 + 7714307 TGTTTTCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29249467 9 + 50890351 TGTTTTCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 873109 9 - 2385121 TGTTTTCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2309020 9 + 4274983 TGTTTTCTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28540963 9 + 49145316 tgttttctg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5386665 9 + 8899380 tattttctg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1595314 9 - 2680843 tgttttctg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 346454 9 - 4471408 tgttttttg i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 561373 9 + 2501019 tgtgttctg i proCoq1.NW_012149263v1 C 0 C 0 e micMur3.chr22 3945548 475 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4597555 0 - 122678785 C a score=30339.000000 s hg38.chr19_GL383574v1_alt 55265 12 + 155864 AAGCCACA--------------tttt-- s panTro5.chr19 36123884 18 + 61309027 AAGCCACA--------tttttttttt-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39869829 26 + 64411610 AAGCCTTACttttttttttttttttt-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6287665 17 - 8369475 AAGCCACA---------ttttttttt-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63880308 11 - 106955855 AAGCCACA---------------ttt-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30191506 10 + 53671032 AAGCCACt----------------tt-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34645241 10 + 59248254 AAGCCACt----------------tt-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4511837 10 - 13342542 AAGCCACt----------------tt-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5442314 10 + 7714307 AAGCCACt----------------tt-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29249476 10 + 50890351 AAGCCACt----------------tt-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 873118 10 - 2385121 AAGCCACt----------------tt-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2309029 10 + 4274983 AAGCCACt----------------tt-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28540972 10 + 49145316 aagccaca----------------tt-- i calJac3.chr22 C 0 I 363 s proCoq1.NW_012149263v1 561382 12 + 2501019 gtgccaca----------------tttt i proCoq1.NW_012149263v1 C 0 I 477 e micMur3.chr22 3945548 475 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4597555 0 - 122678785 C e aotNan1.NW_018505377v1 346463 0 - 4471408 C e cebCap1.NW_016107633v1 1595323 0 - 2680843 C e saiBol1.JH378197 5386674 0 + 8899380 C a score=342522.000000 s hg38.chr19_GL383574v1_alt 55277 66 + 155864 ttt--tttttttttt-----------gagacagagtctcactctgtcacccaggctggagcacagtggcccaatattgg s panTro5.chr19 36123902 66 + 61309027 ttt--tttttttttt-----------gagacagagtctcactctgtcacccaggctggagcacagtggcccaatattgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39869855 64 + 64411610 ttt--tttttttttt-----------tAGAC--agtctcactctgtcacccaggctggagcacagtggcccaatattgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6287682 66 - 8369475 ttt--tttttttttt-----------gagacagagtctcactctgtcacccaggctggagcacagtggcccagtattgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63880319 66 - 106955855 ttt--tttttttttt-----------gaaacggagtctcactctgtcacccaggctggagcacagtggcccaatattgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30191516 66 + 53671032 ttt--aatttttttt-----------gagacagagtctcactctgttgcccaggctggagcgcagtggcccaatcttgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34645251 66 + 59248254 ttt--aatttttttt-----------gagacagagtctcactctgttgcccaggctggagcgcagtggcccaatcttgg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4511847 66 - 13342542 ttt--aatttttttt-----------gagacagagtctcactctgttgcccaggctggagcgcagtggcccaatcttgg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5442324 66 + 7714307 ttt--tttttttttt-----------gagacagagtctcactctgttgtccaggctggagcgcagtggcccaatcttgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29249486 66 + 50890351 ttt--tctttttttt-----------gagacggagtctcactccgttgcctaagctggagcgcagtggcccaatcttgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 873128 68 - 2385121 ttttatttttttttt-----------gagacagagtctcactctgttgcccaggctggagcgcagtggcccaatcttgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2309039 77 + 4274983 ttt--ttctttttttttttttttttggagatggagtctcactctgttgcccaggctagagcgcagtggcccagtcttgg i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 561394 477 + 2501019 I e micMur3.chr22 3945548 475 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4597555 0 - 122678785 C e aotNan1.NW_018505377v1 346463 0 - 4471408 C e cebCap1.NW_016107633v1 1595323 0 - 2680843 C e saiBol1.JH378197 5386674 0 + 8899380 C e calJac3.chr22 28540982 363 + 49145316 I a score=53392.000000 s hg38.chr19_GL383574v1_alt 55343 8 + 155864 ctcattgc s panTro5.chr19 36123968 8 + 61309027 ctcattgc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39869919 8 + 64411610 ctcattgc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6287748 8 - 8369475 ctcattgc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63880385 8 - 106955855 ctcactgc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30191582 8 + 53671032 ctcactgc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34645317 8 + 59248254 ctcactgc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4511913 8 - 13342542 ctcactgc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5442390 8 + 7714307 ctcactgc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29249552 8 + 50890351 ctcactgc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 873196 8 - 2385121 ctcactgc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2309116 8 + 4274983 ctcactgc i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4597555 8 - 122678785 CTCATTGT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 561394 477 + 2501019 I e micMur3.chr22 3945548 475 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e aotNan1.NW_018505377v1 346463 0 - 4471408 C e cebCap1.NW_016107633v1 1595323 0 - 2680843 C e saiBol1.JH378197 5386674 0 + 8899380 C e calJac3.chr22 28540982 363 + 49145316 I a score=1043213.000000 s hg38.chr19_GL383574v1_alt 55351 184 + 155864 aacctccacctcccaggttcaagcaattttcctacctcagcctcctgagtagctgggactgcaggcatgcgccaccacgcccagctaatttttgaatttttgtagagacgaggtttcatcatactggtcaggccagtcttgaactcctgatctcgtgatctgcccacctcggcctcccaaaatg s panTro5.chr19 36123976 184 + 61309027 aacctccacctcccaggttcaagcaattttcctacctcagcctcctgagtagctgggactgcaggcatgcgccaccacgcccagctaatttttgaatttttgtagagacgaggtttcatcatattggtcaggccagtcttgaactcctgacctcgtgatctgcccacctcggcctcccaaaatg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39869927 184 + 64411610 aacctccacctcccaggttcaagcaattttcctacctcagcctcctgagtagctgggactgcaggcatgcgccaccacgcccagctaatttttgaatttttgtagagacgaggtttcatcatattggtcaggccagtcttgaactcctgacctcgtgatctgcccacctcggcctcccaaaatg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6287756 184 - 8369475 aacctccacctcccaggttcaagcaattttcctacctcagcctcctgagtagctgggactgcaggcatgcgccaccacgcccagctaatttttgaatttttgtagagacgaggtttcatcatattggtcaggccggtcttgaactcctgacctcgtgatctgctcacctcggcctcccaaaatg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63880393 184 - 106955855 aacctccacctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggactgcaggcatgcgccaccacgcccggctaatttttgaatttttgtagagacgaggtttcaccatattggtcaggccagtcttgaactcctgacctcatgatctgcccaccttggcctcccaaaatg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30191590 183 + 53671032 aacccctgcctcccaggttcaagcaatcctcctgcctcagcctcccgagt-gctgggactacaggcgtgcaccaccacgcccggctaatttttgaatttttgtagagacgaggtttcaccatattggtcaggctggtcttgaactcttgacctcgtgatctgcccacctcggcctcccaaagtg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34645325 183 + 59248254 aacccctgcctcccaggttcaagcaatcctcctgcctcagcctcccgagt-gctgggactacaggcgtgcaccaccacgcccggctaatttttgaatttttgtagagacgaggtttcaccatattggtcaggctggtcttgaactcttgacctcgtgatctgcccacctcggcctcccaaagtg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4511921 183 - 13342542 aacccctgcctcccaggttcaagcaatcctcctgcctcagcctcccgagt-gctgggactacaggcgtgcaccaccacgcccggctaatttttgaatttttgtagatacgaggtttcaccatattggtcaggctggtctttaactcttgacctcgtgatctgcccacctcggcctcccaaagtg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5442398 183 + 7714307 aacccctgcctcccaggttcaagcaatcctcctgcctcagcctcccgagt-gctgggactacaggcgtgtaccaccacgcccggctaatttttgaatttttgtagagacgaggtttcaccatattggtcaggctggtcttgaactcttgacttcgtgatctgcccacctcggcctcccaaagtg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29249560 183 + 50890351 aacccccgcctcgcaggttcaagcaatcctcctgcttcagcctcccgagt-gctgggactacaggcgtgcaccaccacgcccgttttttttttgaatttttgtagagacgaggtttcaccatattggtcaggctggtcttgaactcttgacctcgtgatctgcccacctcggcctcccaaagtg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 873204 183 - 2385121 aacccctgcctcccaggttcaagcaatcctcctgcctcagcctcccgagt-gctgggactacaggcgtgcaccaccacgcccggctaatttttgaatttttgtagagacgaggtttcaccatattggtcaggctggtcttgaactcttgacctcgtgatctgcccacctcggcctcccaaagtg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2309124 183 + 4274983 aacctccatctcccaggttcaagcaatcctcctgcctcagcctcccgagt-gctgggactacaggcgtgcaccaccacgcctggctaagttttgaatttttgtagagacgaggtttcaccatattggtcaggccggtcttgaactcttgacctcgtgatctgcccacctcggcctcccaaagtg i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 561394 477 + 2501019 I e micMur3.chr22 3945548 475 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e canFam3.chr1 4597563 0 - 122678785 C e aotNan1.NW_018505377v1 346463 0 - 4471408 C e cebCap1.NW_016107633v1 1595323 0 - 2680843 C e saiBol1.JH378197 5386674 0 + 8899380 C e calJac3.chr22 28540982 363 + 49145316 I a score=203077.000000 s hg38.chr19_GL383574v1_alt 55535 35 + 155864 ctgggattacaggtgtgagccactgcgcccggccC s panTro5.chr19 36124160 35 + 61309027 ctgggattacaggtgtgagccactgcgcccggccC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39870111 35 + 64411610 ctgggattacaggtgtgagccactgcgcccggccC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6287940 35 - 8369475 ctgggattacaggtgtgagccactgtgcccggccC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63880577 35 - 106955855 ctgggattacaggtgtgagccactgcgcccagccC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30191773 35 + 53671032 ctgggattacgggtgtgagccactgcacctggccC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34645508 35 + 59248254 ctgggattacgggtgtgagccactgcacctggccC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4512104 35 - 13342542 ctgggattacgggtgtgagccactgcacctggccC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5442581 35 + 7714307 ctgggattacgagtgtgagccactgcatctggccC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29249743 35 + 50890351 ctgggattacgggtgtgagcccctgcacctggccC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 873387 35 - 2385121 ctgggattacgggtgtgagccactgcacctggccC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2309307 35 + 4274983 ctgggattatgggtgtgagccactgcacctggccC i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4597563 21 - 122678785 CTGAGATT--------------CTATGCTAGGTTC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 561394 477 + 2501019 I e micMur3.chr22 3945548 475 - 30143674 I e dasNov3.JH563638 293663 9824 + 643850 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e aotNan1.NW_018505377v1 346463 0 - 4471408 C e cebCap1.NW_016107633v1 1595323 0 - 2680843 C e saiBol1.JH378197 5386674 0 + 8899380 C e calJac3.chr22 28540982 363 + 49145316 I a score=10958.000000 s hg38.chr19_GL383574v1_alt 55570 2 + 155864 TA s panTro5.chr19 36124195 2 + 61309027 TA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39870146 2 + 64411610 TA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6287975 2 - 8369475 TA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63880612 2 - 106955855 TA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30191808 2 + 53671032 TG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34645543 2 + 59248254 TG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4512139 2 - 13342542 TG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5442616 2 + 7714307 TG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29249778 2 + 50890351 TG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 873422 2 - 2385121 TG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2309342 2 + 4274983 TG i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4597584 2 - 122678785 TG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 303487 2 + 643850 ta i dasNov3.JH563638 I 9824 C 0 e proCoq1.NW_012149263v1 561394 477 + 2501019 I e micMur3.chr22 3945548 475 - 30143674 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e aotNan1.NW_018505377v1 346463 0 - 4471408 C e cebCap1.NW_016107633v1 1595323 0 - 2680843 C e saiBol1.JH378197 5386674 0 + 8899380 C e calJac3.chr22 28540982 363 + 49145316 I a score=63608.000000 s hg38.chr19_GL383574v1_alt 55572 6 + 155864 AAgcca s panTro5.chr19 36124197 6 + 61309027 AAgcca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39870148 6 + 64411610 AAgcca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6287977 6 - 8369475 AAgcca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63880614 6 - 106955855 AAgcca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30191810 6 + 53671032 AAgcca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34645545 6 + 59248254 AAgcca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4512141 6 - 13342542 AAgcca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5442618 6 + 7714307 AAgcca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29249780 6 + 50890351 AAgcca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 873424 6 - 2385121 AAgcca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2309344 6 + 4274983 AAgcca i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5386674 6 + 8899380 aagcca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1595323 6 - 2680843 aagcca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 346463 6 - 4471408 aagcca i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4597586 6 - 122678785 ATGCCC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 303489 6 + 643850 aattta i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 561394 477 + 2501019 I e micMur3.chr22 3945548 475 - 30143674 I e otoGar3.GL873654 5457472 582 + 5549422 I e mm10.chr7 111072568 2157 - 145441459 I e calJac3.chr22 28540982 363 + 49145316 I a score=485330.000000 s hg38.chr19_GL383574v1_alt 55578 47 + 155864 ca-ttttaagagggataagaacaaatagaattcattaaattaggagtc s panTro5.chr19 36124203 47 + 61309027 ca-ttttaagagggataagaacaaatagaattcattaaattaggagtc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39870154 47 + 64411610 ca-ttttaagagggataagaacaaatagaattcattaaattaggagtc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6287983 47 - 8369475 ca-ttttaagagggataagaacaaatagaattcattaaattaggagtc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63880620 47 - 106955855 ca-ttttaagagggttaagaacaaatagaattcattaaattaggagtc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30191816 47 + 53671032 ca-ttttaagagggataagaacaaatagaattcattaaattaggagtc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34645551 47 + 59248254 ca-ttttaagagggataagaacaaatagaattcattaaattaggagtc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4512147 48 - 13342542 catttttaagagggataagaacaaatagaattcattaaattaggagtc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5442624 47 + 7714307 ca-ttttaagagggataagaacaaatagaattcattaaattaggagtc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29249786 47 + 50890351 ca-ttttaagagggataagaacaaatagaattcattaaattaggagtc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 873430 47 - 2385121 ca-ttttaagagggataagaacaaatagaattcattaaattaggagtc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2309350 47 + 4274983 ca-ttttaagagggataagaacaaatagaattcattaaattaggagtc i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5386680 47 + 8899380 ca-ttttaagagggataagaacaaatagaattcattaaattcacagtc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1595329 47 - 2680843 ca-ttttaagagggataagaacaaatagaattcattaaattcagagtc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 346469 44 - 4471408 ca-ttttaagagggataag---aaatggaattcattaaattcagagtc i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111074725 43 - 145441459 CA-TTTTTAGGGGTTTGAG---GAGTAGAGTT-ACCAAATTAGGAGGG i mm10.chr7 I 2157 I 2 s canFam3.chr1 4597592 43 - 122678785 TG-TTTTAAAGGGGATATGAAGAACTAAGATTTATTAAATTGGT---- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 303495 47 + 643850 ta-tGTAGATATTAGTATGAACAAATAGAATTTGTTTAATTAGGAACA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 561394 477 + 2501019 I e micMur3.chr22 3945548 475 - 30143674 I e otoGar3.GL873654 5457472 582 + 5549422 I e calJac3.chr22 28540982 363 + 49145316 I a score=1267699.000000 s hg38.chr19_GL383574v1_alt 55625 126 + 155864 caagaaaggaag------------gggagagtgtcctaaagaccatg--tgaa-gtgagtaa---tggttgaagggactggagttgactaacctgaaaatgagcaaattgcaaggggcatgattgtaatcttcatgtgttttag s panTro5.chr19 36124250 126 + 61309027 caagaaaagaag------------gggagagtgtcctaaagaccatg--tgaa-gtgagtaa---tggttgaagggactggagttgactaacctgaaaatgagcaaattgcaaggggcatgattgtaatcttcatgtgttttag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39870201 126 + 64411610 caagaaaagaag------------gggagagtgtcctaaagaccatg--tgaa-gtgagtaa---tggttgaagggactggagttgactaacctgaaaatgagcaaattgcaaggggcatgattgtaatcttcatgtgttttag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6288030 126 - 8369475 caagaaaggaag------------gggagagtgtcctaaagaccatg--tgaa-gtgagtaa---tggttgaagggactggagttgactaacctgaaaatgagcaaattgcagggggcatgattgtaatcttcatgtgttttag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63880667 126 - 106955855 caagaaaggaag------------gggagagtatcataaagaccatg--tgaa-gtgagtaa---tggttgaagggactggagttgactaacctgaaagtgggcaaattgcaaggggcatgattgtaatattcatgtgttttaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30191863 118 + 53671032 caagaaaggaag------------gggagagtgttataaagaccatg--tgaa-gtgagtta---tggttgaaggaactgg--------agcctgaaaatgagcagattgcaaggggcatgattgtaatcttcatgtgttttaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34645598 118 + 59248254 caagaaaggaag------------gggagagtgttataaagaccatg--tgaa-gtgagtta---tggttgaaggaactgg--------agcctgaaaatgagcagattgcaaggggcatgattgtaatcttcatgtgttttaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4512195 118 - 13342542 caagaaaggaag------------gggagagtgttataaagaccatg--tgaa-gtgagtta---tggttgaaggaactgg--------agcctgaaaatgagcagattgcaaggggcatgattgtaatcttcatgtgttttaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5442671 118 + 7714307 caagaaaggaag------------gagagagtgttataaagaccatg--tgaa-gtgagtta---tggttgaaggaactgg--------agcctgaaaatgagcagattgcaaggggcatgattgtaatcttcatgtgttttaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29249833 126 + 50890351 caagaaaggaag------------gggagagtgttataaagaccaag--tgaa-gtgagtaa---tggttgaaggaactggagttgactagcctgaaaatgagcagattgcaaggggcatgattgtaaccttcatgtgttttaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 873477 118 - 2385121 caagaaaggaag------------gggagagtgttataaagaccatg--tgaa-gtgagtta---tggttgaaggaactgg--------agcctgaaaatgagcagattgcaaggggcatgattgtaatcttcatgtgttttaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2309397 126 + 4274983 caagaaaggaag------------gggagagtgttataaagaccatg--tgaa-gtgagtaa---tggttgaaggaactggagttgactagcttgaaaatgagcagattgcaaggggcatgattgtaatcttcatgtgttttaa i colAng1.NW_012111697v1 C 0 I 366 s calJac3.chr22 28541345 129 + 49145316 CAAGAAAGGAAG---------TGGGGGGTACTGTCATTTTGaccatg--taaa-atgaatat---gggttaatggatatggaattgaccagcctggagatgagcatattgcaaggggcatgattgtattcttcatgtgttttaa i calJac3.chr22 I 363 C 0 s saiBol1.JH378197 5386727 130 + 8899380 caagaaaggaagt--------tggggggtagtgtcataaagaccatg--taag-gtgagtaa---tgtttgaaggaactggagttgactagcctggaaatgagcagattgcaaggggcatgattgtaattttcacgtgttttaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1595376 130 - 2680843 caagaaaggaagt--------tggggggtagtgtcataaagaccatg--taag-gtgagtaa---tgtttgaaggaactggagttgactagcctggaaatgagcagattgcaaggggcatgattgtaatcttcatgtgttgtaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 346513 129 - 4471408 caagaaaggaaa---------tagggggtagtgtcataaagaccagg--taag-gtgagtaa---tgtttgaaagaactggagttgactagcctggaaatgagcagattgcaaggggcatgattgtaatcttcatgtgtttgaa i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111074770 100 - 145441459 ---CTGGGGAGC------------AGCAAAGTGTCTTAAATGGCATGGCTGAA-GTGATTAGAATTAGTTGAA--AACCGGAGTTGACTACTCTGGAAATGAGCAGATTAC----------ATTGCAA---------------- i mm10.chr7 I 2 C 0 s canFam3.chr1 4597635 113 - 122678785 -----------G------------GGGGTGGTGT--TAAAGACTGTG--GGAAGGtgagtaa---tggttgaaggaactggagttgcttagcttggaaatgagaaggtggtgagaggcatgatcatggtcttcaaatatTTAA- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 303542 125 + 643850 ------------GTTAAAATTTTTGAAATGGAGTCTTAAAGACC-CA--TGAA-ATAAATGG---TGCttgaaggaactggagttgcctagcctggagatgagaagtgtatgagtgatgtgatcaaaattttcagatattttaa i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 561394 477 + 2501019 I e micMur3.chr22 3945548 475 - 30143674 I e otoGar3.GL873654 5457472 582 + 5549422 I a score=3046249.000000 s hg38.chr19_GL383574v1_alt 55751 292 + 155864 gagcagaaggataaacttctgctgt--gggctAGACTGGTGAAAATA-TAGAAAATGTTGAGAGAAGAGGTA---------------GGTTTTATTAACTGAAGTGAATAG-----tttgaa---cttttatcttgaggacagt-ggaagccaccagaaggtctaaagcacgataa---tgttattacattt--atattttgt---------aaagaatcact---------------------------------------------------------------------------------------------ctgactaccatctttaggttggatttagaggttgtggaagggggaggtaCTGTTGAAATA--------TAGTGAAAACCTGCTT--------AGATGAAAT-ACC--AAGG----AAAGA--GCACAGTATATCA s panTro5.chr19 36124376 292 + 61309027 gagcagaaggataaacttctgctgt--gggctAGACTGGTGAAAATA-TAGAAAATGTTGAGAGAAGAGGTA---------------GGTTTTATTAACTGAAGTGAATAG-----tttgaa---ctttcatcttgaggacagt-ggaagccatcagaaggtctaaagcacgataa---tgttattatattt--atattttgt---------aaagaatcact---------------------------------------------------------------------------------------------ctgactaccatctttaggttggatttagaggttgtggaagggggaggtaCTGTTGAAATA--------CAGTGAAAACCTGCTT--------AGATGAAAT-ACC--AAGG----AAAGA--GCACAGTATATCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39870327 286 + 64411610 gagcagaaggataaacttctgctgt--gggctAGACTGGTGAAAATA-TAGAAAATGTTGAGAGAAGAGGTA---------------GGTTTTATTAACTGAAgtgaatag-----tttgaa---ctttcatcttgaggacagt-ggaagccatcagaaggtctaaagcacgataa---tgtta------tt--atattttgt---------aaagaatcact---------------------------------------------------------------------------------------------ctgactaccatctttaggttggatttagaggttgtggaagggggaggtaCTGTTGAAATA--------CAGTGAAAACCTGCTT--------AGATGAAAT-ACC--AAGG----AAAGA--GCACAGTATATCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6288156 292 - 8369475 gagcagaaggataaacttctgctgt--gggctagactggtgaaaata-tagaaaatgatgggagaagaggta---------------ggttttattaactgaagtgaatag-----tttgaa---cttttatcttgaggacagt-ggaagccatcagaaggtctaaagcacgataa---tgttattacattt--atattttgt---------aaagaatcact---------------------------------------------------------------------------------------------ctgactaccatctttaggttggatttagaggttgtggaagggggaggtaCTGTTGAAATA--------TAGTGAAAACCTGCTT--------AGATGAAAT-ACC--AAGG----AAAGA--GCACAGTATATCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63880793 292 - 106955855 gagcagaaggataaactgctgctgt--gggctagactggtgaaaata-tagaaaatgatgagagaagaggta---------------ggtttTATTAACTGAAgtaaatag-----tttgaa---cttttatctcgaggacagt-ggaagccatcagaaggtctaaagcacgataa---tgtgattatattt--atattttgt---------aaaaagtcact---------------------------------------------------------------------------------------------ctgactaccatctttaggttggatttagaggTTATGGAAGGGGGAGGTGCTGTTGAAATA--------TAGTGAAAACCTGCAT--------AGATGAAAT-ACT--AAGG----AAAGA--GCACAGTATATCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30191981 287 + 53671032 gagcAGAAGGATAAA---CTGCTGT--GGGCTAGACTGGTGAAAGTA-TAGAAAATGATGAGAGAAGAGGTA---------------GGTTTTATTAACTGAAgtaagtag-----tttgaa---cttttatcttgagg------ggaagccatcagaaggtctaaagcacgatagtagtgtgattacattt--atattttgt---------aaaaaatcact---------------------------------------------------------------------------------------------ctgactaccatctttaggttggatttagaggttgtggagcagggagGTGCTGTTGAAATA--------TAGTGAAAACCTGCAC--------AGATGAAAT-ACT--AAGG----AGAGA--GCACAGTATATCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34645716 290 + 59248254 gagcagaaggataaacttctgctgt--gggctAGACTGGTGAAAGTA-TAGAAAATGATGAGAGAAGAGGTA---------------GGTTTTATTAACTGAAgtaaatag-----tttgaa---cttttatcttgagg------ggaagccatcagaaggtctaaagcacgatagtagtgtgattacattt--atattttgt---------aaaaaatcact---------------------------------------------------------------------------------------------ctgactaccatctttaggttggatttagaggttgtggagcagggagGTGCTGTTGAAATA--------TAGTGAAAACCTGCAC--------AGATGAAAT-ACT--AAGG----AGAGA--GCACAGTATATCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4512313 290 - 13342542 gagcagaaggataaacttctgctgt--gggctAGACTGGTGAAAGTA-TAGAAAATGATGAGAGAAGAGGTA---------------GGTTTTATTAACTGAAgtaaatag-----tttgaa---cttttatcttgagg------ggaagccatcagaaggtctaaagcacgatagtagtgtgattacattt--atattttgt---------aaaaaatcact---------------------------------------------------------------------------------------------ctgactaccatctttaggttggatttagaggTTGTGGAGTGGGGAGGTGCTGTTGAAATA--------TAGTGAAAACCTGCAC--------AGATGAAAT-ACT--AAGG----AGAGA--GCACAGTATATCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5442789 290 + 7714307 gagcagaaggataaacttctgctgt--gggctAGACTGGTGAAAGTA-TAGAAAATGATGAGAGAAGAGGTA---------------GGTTTTATTAACTGAAgtaaatag-----tttgaa---cttttatcttgagg------ggaagccatcagaaggtctaaagcacgatagtagtgtgattacattt--atattttgt---------aaaaaatcact---------------------------------------------------------------------------------------------ctgactaccatctttaggttggatttagaggTTGTGGAGCGGGGAGGTGCTGTTGAAATA--------TAGTGAAAACCTGCAC--------AGATGAAAT-ACT--AAGG----AGAGA--GCACAGTATATCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29249959 290 + 50890351 gagcagaaggataaacttctgctgt--gggctAGACTGGTGAAAGTA-TAGAAACTGATGAGAGAAGAGGTA---------------GGTTTTATTAACTGAAAtaaatag-----tttgaa---cttttatcttgagg------ggaagccatcagaaggtctaaagcacgatagtagtgtgattacgttt--atattttgt---------aaaaaatcact---------------------------------------------------------------------------------------------ctgactaccatctttaggttggatttagaggttgtggaacggggagGTGCTGTTGAAATA--------CAGTGAAAACCTGCAC--------AGATGAAAT-ACT--AAGG----AGAGA--GCACAGTATATCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 873595 291 - 2385121 gagcagaaggataaacttctgctgt--gggctAGACTGGTGAAAGTA-TAGAAAATGATGAGAGAAGAGGTA---------------GGTTTTATTAACTGAAAtaaatag-----tttgaa---cttttatcttgagg------ggaagccatcagaaggtctaaagcacgatagtagtgtgattacattt--atattttgt--------aaaaaaatcact---------------------------------------------------------------------------------------------ctgactaccatctttaggttggatttagaggttgtggagcggggagGTGCTGTTGAAATA--------TAGTGAAAACCTGCAC--------AGATGAAAT-ACT--AAGG----AGAGA--GCACAGTATATCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2309889 290 + 4274983 gagcagaaggataaacttctgctgt--gggctGGACTGGTGAAAGTA-TAGAAAATGATGAGAGAAGAGGTA---------------GGTTTTATTAACTGAAgtaaacag-----tttgaa---cttttatcttgagg------ggaagccgtcagaaggtctaaatcacgataatagtgtgattacattt--atattttgt---------aaaaaatcact---------------------------------------------------------------------------------------------ctgactaccatctttaggttggatttagaggttgtggagcggggagGTGCTGTTGAAATA--------TAGTGAAAACCTGCAC--------AGATGAAAT-ACT--AAGG----AGAGA--GCACAGTATATCA i colAng1.NW_012111697v1 I 366 C 0 s calJac3.chr22 28541474 292 + 49145316 gagcagaagggtaaacttctgctgt--gggctAGGCTGGGGAAAATA-CAGAAA---ATGAGAGAAGAGGTA---------------GGTTTTATTAACTGAAgtaaatag-----tttgaa---cttttatcttgaagacagt-gggagccatcagaaggtctaaatcacggtagtagtgtgattacgttt--gtattttgt---------aaaaaatcact-------------------------------------------------------------------------------------------------ctACCATCTTTAGGTTGGATTTAGAGGTTATGGAAGAGAGAGGTGCTGTTGAAATG--------CAGTAAAAACCTGCAT--------TCATGAAAT-ACTAGAGAG----AGAGAGAGCACAGTATATCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5386857 290 + 8899380 gACCAGAAGGGTAAA---CTGCTGT--GGGCTAGGCTGGTGAAAATA-CAGAAAATGATGAGAGAAGAAGTA---------------GGTTTTATTAACTGAGGTAAATAG-----TTCGAA---CTTTTATCTTGAAGACAGT-GGGAGCCATCAGAAAGTCTAAATCACTGTAGTAGTGTGATTACATTT--GTATTTTGT---------AAAAAATCACT-------------------------------------------------------------------------------------------------GTACCATCTTTAGGTTGGATTTAGAGGTTATGGAAGAGAGAGGTGCTGTTGAAATA--------TAGTAAAAACCTGCAT--------TCATGAAAT-ACT--GTGG----AGAGAAGGCACAGTATATCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1595506 290 - 2680843 gagcagcagggtaaa---ctgctgt--gggctaggctggtgaaaata-cagaaaatgatgggagaagaggta---------------ggttttattaactgaagtaaatag-----tttgaa---cttttatcctgaggacagt-gggagccatcagaaggtctaaatcattgtagtagtgtgagtacattt--gtattttgt---------aaaaaatcact-------------------------------------------------------------------------------------------------ctACCATCTTTAGGTTGGATTTAGAGGTTATGGAAGAGAGAGGTGCTGTTGAAATA--------CAGTAAAAACCTGCAT--------TCATGAAAT-ACT--ACGG----AGAGAAAGCACAGTATATCA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 346642 300 - 4471408 gagcagaagggtaaacttctgctgt--gggctagactggtgaaaata-cagaaaatgatgagagaggaggta---------------ggtttTATTAACTGAAGTAAATAG-----TTTGAC---CTTTTATCTTGAAGACAGT-GGGAGCCATCAGAAGGTCTAAATCACTGTAGTAGTGTGATTACATTT--GTATTTTGTAAAAAAAAAAAAAAATCACT-------------------------------------------------------------------------------------------------CTACCATCTTTAGGTTGGATTTAGAGGTTATGGAAGAGAGAGTTGCTGTTGAAATA--------TAGTAAAAACCTACAT--------TCATGAAAT-AAT--ATGG----AGAGA--GCACAGTATATCA i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111074870 259 - 145441459 GAGCA-AAGTGTAAA----TGCTTTACAGTTTACACAGGTTCAAATACTCAGAAGTGATG-TAAAAGGGGCAGAGAAC------CAGGGATTTATAAGCAGAGGT-AGTAG-----TTTATA--------------------------------AAGAGGGTCCCAAACACTATAATGGGGTGATTATATTT--GTATTTTGT---------AAGAGCTAATT----------------------------------------------------------------------------------------------TAAATACCATCATAGAGTGGTATTTAAA--TTAGGGG----------GTTATTCAAATA--------CAGGAACAACCT------------TGATTGACT-ATT--AAGAGAGTAAAGA--GTGCTGTATAAAT i mm10.chr7 C 0 C 0 s canFam3.chr1 4597748 311 - 122678785 GTGCAGATGAGTAAA---CTGCTAt--ggagtagaccagtgaaaata-agaaaagtggtgagagaagaggtaagcaaataagggtagggccttataaattgaggtaagtag-----tctgaa---cttttatgttgagggcagtggaaagccatcacaggatcctaagcactgtaatgtggttatcacatatccgtatttcac--------caagagattgtt---------------------------------------------------------------------------------------------ctgactaccatcttcaggttggatttagaggtaggggaa----gaagagaaacTGAAATAGTTCCTTCTGGAGAAAACCTACAT--------AGATTAAA-------TAGA----AGAGA--ACATAGCATATGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 303667 399 + 643850 gggCACACAGGTAACCTTCTGTTGG--AGGCCAAATTggtgaaaata-aggaaagtgttaagagaaaaaatg---------------ggc-----------agataagaagggccttataaagtcctttcaacttgagaatagtaggaagccatcaaagggttctaagcattgtattaatgtgattatattt--gtaatttat---------aaaggagtattctggTAGAACAatggagctcagtggttgaacacatgcttcatatgtacgaagtcccaagttcaacctccagtacctcctaaaaaaaaaGTTTTCTGGCTACCATCTTTAGGTTGAATTTAGAGGTTGGAGAGTAGGAAG----TATTGCAGTAGTTCCTGCTAGTGAAAATGTACATTAATTTACATATTAAGTAACT--ATGA----AGATA--GTGTAGTATATGA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 561394 477 + 2501019 I e micMur3.chr22 3945548 475 - 30143674 I e otoGar3.GL873654 5457472 582 + 5549422 I a score=3147753.000000 s hg38.chr19_GL383574v1_alt 56043 237 + 155864 AAAG----TGAATGATCCCTAAGTACTGTAGAAACTTAGAGAAGAAATTTGATATAACCTAGTATGGCAGAGAAT-TGGGCCCTTTCTAGGGACCTTTTTACTCATATTGCCAGAACTTTTTGCAGCTGCTTTAGGCAGAATGCAGCCTCACAGTCCTATCTTAAGGGG--AAGCATTGAAA----CCAGAGTC----CATTGTCTATTGCCTTGGAAATGCTAAAAAAGCTCCTCGTAAACCTGTCTGCTG s panTro5.chr19 36124668 241 + 61309027 AAAG----TGAATGATCCCTAAGTACTGTAGAAACTTAGAGAAGAAATTTGATATAACCTAGTATGGCAGAGAAT-TGGGCCCTTTCTAGGGACTTTTTTACTCATATTGCCAGAACTTTTTGCAGCTGCTTTAGGCAGAATGCAGCCTCACAGTCCTATCTTAAGGGG--AAGCATTGAAA----CCAGAGTCAATGCATTGTCTATTGCCTTGGAAATGCTAAAAAAGCTCCTCGTAAACCTGTCTGCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39870613 241 + 64411610 AAAG----TGAATGATCCCTAAGTACTGTAGAAACTTAGAGAAGAAATTTGATATAACCTAGTATGGCAGAGAAT-TGGGCCCTTTCTAGGGACTTTTTTACTCATATTGCCAGAACTTTTTGCAGCTGCTTTAGGCAGAATGCAGCCTCACAGTCCTATCTTAAGGGG--AAGCATTGAAA----CCAGAGTCAATGCATTGTCTATTGCCTTGGAAATGCTAAAAAAGCTCCTCGTAAACCTGTCTGCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6288448 237 - 8369475 AAAG----TGAATGATCCCTAAGTACTGTAGAAACTTAGAGAAGAAATTTGATATAACCTAGTATGGCAGAGAAT-TGGGCCCTTTCTAGGGACTTTTTTACTCATATTGCCAGAACTTTTTGCAGCTGCTTTAGGCAGAATGCAGCCTCACAGTCCTATCTTAAGGGG--AAGCATTGAAA----CCAGAGTC----CATTGTCTATTGCCTTGGAAATGCTAAAAAAGCTCCTCGTAAACCTGTCTGCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63881085 237 - 106955855 AAAG----TGAATGATCCCTAAGTACTGTAGAAACTTAAAGAAGAAAGTTGATATAACCTAGTATGGCAGAGAAT-TGGGCCCTTTCTAGGGACTTCTTTACTCATGTTGCCAGAACTTTTTGCAGCTGCTTTAGGCAGAATGCAGCCTCACAGTCCCATCTTAAGGGG--AAGCATTGAAA----CCAGAGTC----CATCGTCTATTGCCTTGGAAATGCTGAAAAAGCTCCTTGTAAACCTGTCTGCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30192268 225 + 53671032 AAAG----TGAATGATCCCTAAGTACTGTAGAAACTTA---AAGAAATTTGATATAACCTAGTATGGCAGAGAAT-TGGGCCCTTTCTAGGGACTTTGTTACTCATATTGCCAGAACTTTTTGCAGCTGCTTTAGGCAGAATGCAGCCTCACAGTCCCATCTTAAGGGG--AAGCCTTGAAA----CC--AGTC-----------TGTTGCCTTGGAAATGCTGAAAAAGCTCCTTGTAAACCTGTCTGCTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34646006 225 + 59248254 AAAG----TGAATGATCCCTAAGTACTGTAGAAACTTA---AAGAAATTTGATATAACCTAGTATGGCAGAGAAT-TGGGCCCTTTCTAGGGACTTTGTTACTCATATTGCCAGAACTTTTTGCAGCTGCTTTAGGCAGAATGCAGCCTCACAGTCCCATCTTAAGGGG--AAGCCTTGAAA----CC--AGTC-----------TGTTGCCTTGGAAATGCTGAAAAAGCTCCTTGTAAACCTGTCTGCTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4512603 227 - 13342542 AAAG----TGAATGATCCCTAAGTACTGTAGAAACTTA---AAGAAATTTGATATAACCTAGTATGGCAGAGAAT-TGGGCCCTTTCTAGGGACTTTGTTACTCATATTGCCAGAACTTTTTGCAGCTGCTTTAGGCAGAATGCAGCCTCACAGTCCCATCTTAAGGGG--AAGCCTTGAAA----CCAGAGTC-----------TGTTGCCTTGGAAATGCTGAAAAAGCTCCTTGTAAACCTGTCTGCTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5443079 227 + 7714307 AAAG----TGAATGATCCCTAAGTACTGTAGAAACTTA---AAGAAATTTGATATAACCTAGTATGGCAGAGAAT-TGGGCCCTTTCTAGGGACTTTGTTACTCATATTGCCAGAACTTTTTGCAGCTGCTTTAGGCAGAATGCAGCCTCACAGTCCCATCTTAAGGGG--AAGCCTTGAAA----CCAGAGTC-----------TGTTGCCTTGGAAATGCTGAAAAAGCTCCTTGTAAACCTGTCTGCTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29250249 226 + 50890351 AAAG----TGAACAATCCCTAAGTACTGTAGAAACTTA---AAGAAATTTGATATAACCTAGTATGGCAGAGAAT-TGGGCCCTTTCTAGGGACTTTGTTACTCATATTGCCAGAACTTTTTGCAGCTGCTTTAGGCAGAATGCAGCCTCACAGTCCCATCTTAAGGGG--AAGCGTTGAAA----CCAGAGTC-----------TGTTGCCTTGGAAATGCTGAAAAC-CTCCTTGTAAACCTGTCTGCTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 873886 227 - 2385121 AAAG----TGAATGATCCCTAAGTACTGTAGAAACTTA---AAGAAATTTGATATAACCTAGTATGGCAGAGAAT-TGGGCCCTTTCTAGGGACTTTGTTACTCATATTGCCAGAACTTTTTGCAGCTGCTTTAGGCAGAATGCAGCCTCACAGTCCCATCTTAAGGGG--AAGCCTTGAAA----CCAGAGTC-----------TGTTGCCTTGGAAATGCTGAAAAAGCTCCTTGTAAACCTGTCTGCTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2310179 228 + 4274983 AAAG----TGAATGATCCCTAAGTACTGTAGAAACTTAGAGAAGAAATTTGATATAACCTAGTATGGCAGAGAAT-TGGGCCCTTTCTAGGGACTTTGTTACTCATACTGCCAGAACTTTTTGCAGCTGCTTTAGGCAGAATGCAGCCTCACAGTCCCATCTTAAGGGG--AAGCGTTGAAA----CC--AGTC-----------TATTGCCTTGGAAATGCTGAAAAAGCTCCTCATAAACCTGTCTGCTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28541766 237 + 49145316 AAAG----TGAATGATGCATAAGCACTGCAGAAACTTAGAGAAGAAATTTGATACAACCCAGTATGGCAGAGAAT-TGGGCCCTTTCTAGGGACTTTGTTACTCATATTGCCAGAACTTATTGCAGCTGCTTTAGGCAGAATGCAGCCTCGCAGTCCCATCTTAAGGGA--AAGCGTTGGAA----CCAGAGAC----CATTGTCTGTTGCCTTGGAAATGCTGAAAAAGCTCCTCGTAAACCTCTCTGCTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5387147 237 + 8899380 AAAG----TGAATGATGCATAAGCACTGTAGAAACTTAGAGAAGAAATTTGATACAACCCAGTATGGCAGAGAAT-TGGGCCCTTTCTAGAGACTTTGTTACTCATATTGCCAGAACTTATTGCAGCTGCTTTAGGCGGAATGCAGCCTCGCAGTCCCATCTTAAGGGG--AAGCGTTGGAA----CCAGAGAC----CATTGTCCATTGCCTTGGAAATGCTGAAAAAGCTCCTCATAAACTTGTCTGCTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1595796 237 - 2680843 AAAG----TGAATGATGCATAAGCACTGTAGAAACTTAGAGAAGAAATTTGATACAACCCAGTATGGCAGAGAAT-TGGGCCCTTTGTAGGGACTTTGTTACTCATATTGCCAGAACTTATTGCAGATGCTTTAGGCAGAATGCAGCCTCGCAGTCCCATCTTAAGGGG--AAGCGTTGGAA----CCAGAGAC----CATTGTCTGTTGCCTTGGAACTGCTGAAAAAGCTCCTCGTAAACCTGTCTGCTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 346942 234 - 4471408 AAAG----CAAATGATGGATAAGCACTGTAGAAACTTAGAGAAGAAATTTGATACAACCCAGTATGGCAGAGAAT-TGGGCCCTTTCTAGGGACTTTGTTACTCATATTGCCAGAACTTACTGCAGCTGCTTTAGGCAGAATGCAGCCTCTCAGTCCCATCTTAAGGGG--AAGCGTTGGAA----CCAGAGAC----CATTGTCTATTGCCTTGGAAATGCTGAAAAAG---CTTGTAAACCTGTCTGCTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3946023 219 - 30143674 AAAG----TGAATGATCTATAAGTACTAGAGAAACTTAGAGAA-----TTGACATGATGCAGTACAGCAGAGAAT-TGGGCCCTTTCTAGGGATTTTATTACTCATATT---AGAACTTTTTGCAGCTGCTTTAGGCAGAATGCCGCCCCACAATCCCATCTTAAGGGA--AAGCATTGAAA----CTAGA--------------TTTTGCCTTGGAAATGCTGAAAAAGCTCCTAGTAGACCTTTGCGCTG i micMur3.chr22 I 475 C 0 s proCoq1.NW_012149263v1 561871 219 + 2501019 AAAG----TGAATGATCTATAAGTACTATAGAAACTTAGAGAA-----TTGACATGATGCAGTACAGCAGAGAAT-TGGACTGTTTCTAGGGATTTTATTACTCATGTT---AGAACTTTTTGCAGCTGCTTTAGGCAGAATGCAGCCCCACAATCCCATCTTAAGGGA--AAGCACTGAAA----CTAGA--------------TGTTGCCTTGGAAATGCTGAAAAAGCTCCTAGTAGACCTGTGTGCTG i proCoq1.NW_012149263v1 I 477 T 17208 s mm10.chr7 111075129 217 - 145441459 AAAG--GTTCAACTACTTGTGA-TGTTGCACAAACTTAGGGAAGA---TTGGTGGAACA-AGTATGCCAGAGAAC-TACATTCTTT-TAATCATTTTGTTATTCATGATTCCCACTCTTTT---GTCTGCTTT-GGCAGAATGCA-CAGCACAGTTCCTTCAGAGTGGG--AAGCATT----------ACAGTC----TGTTGTCTACTGACTT--AAATGGTGGAAA-GCTCTACCTGAAGCATTGTGG-- i mm10.chr7 C 0 C 0 s canFam3.chr1 4598059 240 - 122678785 AAAGTGAATGAATGATCTGTAAGTACTGTAGAAATTTAGAGGAGA---TTGACATAACCTCATGTAGCAAAGAATATGGGCCCTTTGTAGGAA-TTTGTTATTCATATTACCAGAAGTTTTTGTGGTTGCTTTAGGCAGAATGCAGCCCCACGGTACCATCCTGGAGGG--AAGCATTGAAATGAGCTGGAGTT----CATTG--GCTTGCCTTGGAAATGCTGGACAAGCTCTTCATAGACATGTCTGCCA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 304066 201 + 643850 -AAA----TAGATGATTCCTAAATATTCTCAAAATGTAGAGGAGAGGATTGACATAACCTCATATAACAGA------------------------------------TTACCAGAGCATTATGTTATTAATTTAAGCAGACTACAGCCCCACAGTAGTATCCTGAGGGGGTAGGCATTGAAG----CTGGAGTC----CATTGTCTGTTGCCTTGGAAATGCTGGAAAAGCTTCTTGTAAACATATCTGC-- i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5457472 582 + 5549422 I a score=1900637.000000 s hg38.chr19_GL383574v1_alt 56280 137 + 155864 ATTTGGCTGTTTGTCCAGATACTTAGTATTAGAATCACTGAACCTTAATGTTGGTGTTGAATGTACCATTTCTGCTACTTCTCTAGTTGGTATGGGTCCTTGCTGTCCCATCTGCATAACTGCCT-AGGACAGCACTC s panTro5.chr19 36124909 137 + 61309027 ATTTGGCTGTTTGTCCAGATACTTAGTATTAGAATCATTGAACCTTAATGTTGGTGTTGAATGTACCATTTCTGCTACTTCTCTAGTTGGTATGGGTCCTTGCTGTCCCATCTGCATAACTGCCT-AGGACAGCACTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39870854 137 + 64411610 ATTTGGCTGTTTGTCCAGATACTTAGTATTAGAATCATTGAACCTTAATGTTGGTGTTGAATGTACCATTTCTGCTACTTCTCTAGTTGGTATGGGTCCTTGCTGTCCCATCTGCATAACTGCCT-AGGACAGCACTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6288685 137 - 8369475 ATTTGGCTGTTTGTCCAGATACTTAGTATTAGAATCATTGAACCTTAATGTTGGTGTTGAATGTACCATTTCTGCTACTTCTCTAGTTGGTATGGGTCCTTGCTGTCCCATCTGCATAACTGCCT-AGGACAGCACTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63881322 137 - 106955855 GTTTGGCTATTTGTCCAGATACTTAGTATTAGAATCATTGAACCTTAATGTTAGTGTTGAATGTACTATTTCTGCTACTTCTCTAGCTGGTATGGGTCCTTGCTGTCCCATCTGCATAACTGCCT-AGGACAGCACTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30192493 137 + 53671032 ATTTGGCTATTTGTCCAGATACTTAGTATTAGAATCATTGAACCTTAATGTTGGTGTTGAATGTGCCATTTCTGCTACTTCTTTAGCTGATATGGGTCCTTGCTGTCCCATCTGCATATCTGCCT-GGGACAGTATTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34646231 137 + 59248254 ATTTGGCTATTTGTCCAGATACTTAGTATTAGAATCATTGAACCTTAATGTTGGTGTTGAATGTACCATTTCTGCTACTTCTTTAGCTGATATGGGTCCTTGCTGTCCCATCTGCATATCTGCCT-GGGACAGTATTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4512830 137 - 13342542 ATTTGGCTATTTGTCCAGATACTTAGTATTAGAATCATTGAACCTTAATGTTGGTGTTGAATGTACCATTTCTGCTACTTCTTTAGCTGATATGGGTCCTTGCTGTCCCATCTGCATATCTGCCT-GGGACAGTATTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5443306 137 + 7714307 ATTTGGCTATTTGTCCAGATACTTAGTATTAGAATCATTGAACCTTAATGTTGGTATTGAATGTACCATTTCTGCTACTTCTTTAGCTGATATGGGTCCTTGCTGTCCCATCTGCATATCTGCCT-GGGACAGTATTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29250475 137 + 50890351 ATTTGGCTATTTGTCCAGATACTTAGTATTAGAATCATTGAACCTTAATGTTGGTGTTGAATGTACCATTTCTACTACTTCTCTAGCTGATATGGGTCCTTGCTGTCCCATCTGCATATCTACCT-GGGACAGTATTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 874113 137 - 2385121 ATTTGGCTATTTGTCCAGATACTTGGTATTAGAATCATTGAACCTTAATGTTGGTGTTGAATGTACCATTTCTGCTACTTCTCTAGCTGATATGGGTCCTTGCTGTCCCATATGCATATCTGCCT-GGGACAGTATTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2310407 137 + 4274983 ATTTGGCTATTTGTCCAGATACTTAATATTAGAATCATTGAACCTTAACGTTGGTGTTGAATGTACCATTTCTGCTACTTCTCTAGCTGATATGGGTCCTTGCTGTCCCATCTGCATAACTGCCT-GGGATAGTACTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28542003 132 + 49145316 ATGTGGCTATTTGTGCAGATAC------TTAGAATCATTAAACCTTAATGTTGGTGTAGAATGCACTATTTCTGCTACTTCTCTAGCTGATATGGGTCCTTGCTGTCCCATCTGCATAACTGCCTAGGGATAGTACTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5387384 138 + 8899380 ATTTGGCTATTCGTGCAGATACTTAGTATTAGAATCATTGAACCTTAATGTTGGTGTAGAATGCACTATTTCTGCTACTTCTCTAGTTGATATGGGTCCTTGCTGTCCCATCTGCATAACTGCCTAAGGACAGAACTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1596033 134 - 2680843 ATTTGGCAGTTT-TGCAGATACTTAGTATTAGAATCATTGAACCTTAATGTTGGTGTAGAATGCACTATTTCTGCTACTT---TAGCTGATATGGGTCCTTGCTGTCCCATCTGCATAACTGCTTAGGGACAGTACTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 347176 138 - 4471408 ATTTGGCTATTTGTGCAGATACTTAGTATTAGAATCATTGAACCTTAATGTTGGTGTAGAATGCACTATTTCTGCTACTTCTCTAGCTGATATGGGTCCTTGATGTCCTATCTGCATAACTGCCTAGGGACAGTACTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3946242 136 - 30143674 ATTT-GCCATTTGTATAGATACTTAGTATTAGAATAATTGGACTTTACTGTTGGTGTAGAATATACCGTTTCTGCTACTTCTGTAGCTGGTCTGGGTCCTTGGTGTCCCATCTGGATAACTGCCT-GGGACAGGACTG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 544882 137 + 2501019 ATTTGGCCGTTTGTATAGATTCTTAGTATTAGAATAATTGAATTTTAATGTTGGTGCAAAATATACCATTTCTGCTACATCTGTAGCTGATGTGGGTCCTCGCTGTCCCATCTGCATAACTGCCT-AGGACAGTACTG i proCoq1.NW_012149263v1 T 17208 C 0 s mm10.chr7 111075346 107 - 145441459 GTTCACCTGTTGGTAC----------------AATAATTGAAA-TTAATAT--GTGTCTAATACATTGTTTCTGCTA--TCACCATTTGAT-TGTGTCCTTATT------TTTGCACGTTT--CT-AAGGCAGTGCTA i mm10.chr7 C 0 C 0 s canFam3.chr1 4598299 124 - 122678785 ATTTGGCTGTTTGTGCAGATACTCAGTATTAAAATAATTA-----CAATACTGGTGTAGACTGTACCATTTCTGCTACTTCTCTATCCGACATGGGTCTTTGCTGTCTTAGCTCCATA--------AGGACAGTATT- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 304267 121 + 643850 ----------------AGATACCTGGTATTAAAATAATTGAATTTGAGCCTTGGTACAGAATGTATCATTTATGCTACTTATCTGTCTAATGTGGGTCCTTGCCATCACATCTGCATAACTGCCT-AGCACAGTACTA i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5457472 582 + 5549422 I a score=578619.000000 s hg38.chr19_GL383574v1_alt 56417 40 + 155864 CATGTGTTATAAA---CATTGCTTGCATCCAAGGATAGTGGAC s panTro5.chr19 36125046 40 + 61309027 CATGTGTTATAAA---CATTGCTTGCATCCAAGGATAGTGGAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39870991 40 + 64411610 CATGTGTTATAAA---CATTGCTTGCATCCAAGGATAGTGGAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6288822 40 - 8369475 CATGTGTTATAAA---CATTGCTTGCATCCAAGGATAGTGGAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63881459 40 - 106955855 CATGTATTATAAA---CATTGCTTGCATCCAAGGATAGTGGAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30192630 40 + 53671032 CATGTGTTATAAA---CATCGCTTGCATCCAAGGATAGTGGAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34646368 40 + 59248254 CATGTGTTATAAA---CATCGCTTGCATCCAAGGATAGTGGAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4512967 40 - 13342542 CATGTGTTATAAA---CATCGCTTGCATCCAAGGATAGTGGAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5443443 40 + 7714307 CATGTGTTATAAA---CATCGCTTGCATCCAAGGATAGTGGAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29250612 40 + 50890351 CATGTGTTATAAA---CATCGCTTGCATCCAAGGATAGTGGAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 874250 40 - 2385121 CATGTGTTATAAA---CATCGCTTGCATCCAAGGATAGTGGAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2310544 40 + 4274983 CATGTGTTATAAA---CATCGCTTGCATCCAAGGATAGTGGAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28542135 40 + 49145316 CATGTGTTATAAA---CATGGTTTGCATCCAAGGATAGTGGAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5387522 40 + 8899380 CATGTGTTATAAA---CATGGTTTGCATCCGAGGATAGTGGAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1596167 40 - 2680843 CATGTGTTATAAA---CATGGTTTGCATCCAAGGATAGTGGAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 347314 40 - 4471408 CATGTGTTATAAA---AATGGTTTGCATCCAAGGATAGTGAAC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3946378 40 - 30143674 CATGTGTTATGAA---AATTGTTTGCATACAAGGATGCTGCAC i micMur3.chr22 C 0 I 124 s proCoq1.NW_012149263v1 545019 40 + 2501019 CATGTGTTATAAA---AAGTGTTTGCACACAAGGATCCTGGAC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5458054 38 + 5549422 catATGTCATG-----AATTGTTTGCATCCAAGGACACTGGAC i otoGar3.GL873654 I 582 I 4 s mm10.chr7 111075453 38 - 145441459 CATGCATTCCAAA---CGCTGTTAGCTTGAAAGTATA--GGAC i mm10.chr7 C 0 C 0 s canFam3.chr1 4598423 34 - 122678785 ---GCTGTATAAA---AAT---TTACAGCCAAGAATGCTGGAA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 304388 37 + 643850 TGTGTATTAGAAAACTTATTATTTCCATCTAAGAATG------ i dasNov3.JH563638 C 0 C 0 a score=150250.000000 s hg38.chr19_GL383574v1_alt 56457 12 + 155864 AGTATATTGGCT s panTro5.chr19 36125086 12 + 61309027 AGTATATTGGCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871031 12 + 64411610 AGTATATTGGCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6288862 12 - 8369475 AGTATATTGGCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63881499 12 - 106955855 AGTATATTGGCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30192670 12 + 53671032 AGTATATTGGCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34646408 12 + 59248254 AGTATATTCGCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513007 12 - 13342542 AGTATATTGGCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5443483 12 + 7714307 AGTATATTGGCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29250652 12 + 50890351 AGTATATTGGCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 874290 12 - 2385121 AGTATATTGGCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2310584 12 + 4274983 AGTATATTGGCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28542175 12 + 49145316 AGTATATTGGCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5387562 12 + 8899380 AGTATATTGGCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1596207 12 - 2680843 AGTATATTGGCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 347354 12 - 4471408 AGTATATTGGCT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 545059 5 + 2501019 -------TGGCT i proCoq1.NW_012149263v1 C 0 I 43 s otoGar3.GL873654 5458096 12 + 5549422 TGTATACTAGCT i otoGar3.GL873654 I 4 C 0 s mm10.chr7 111075491 8 - 145441459 --TACATAGT-- i mm10.chr7 C 0 C 0 s canFam3.chr1 4598457 12 - 122678785 TATATATTGGTT i canFam3.chr1 C 0 C 0 e micMur3.chr22 3946418 124 - 30143674 I e dasNov3.JH563638 304425 0 + 643850 C a score=326193.000000 s hg38.chr19_GL383574v1_alt 56469 41 + 155864 CCCCCTTCCCCTG-CCCTCCATATTGCC-ATAAAATTCCCAAA s panTro5.chr19 36125098 41 + 61309027 CCCCCTTCCCCTG-CCCTCCATATTGCC-ATAAAATTCCCAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871043 41 + 64411610 CCCCCTTCCCCTG-CCCTCCATATTGCC-ATAAAATTCCCAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6288874 40 - 8369475 CCCCCTTCCCCCG-CCCTCCATATTGCC-AT-AAATTCCCAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63881511 41 - 106955855 CCCCCTTCCCCCG-CCCTCCATATACCC-ATAGAATTCCCAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30192682 39 + 53671032 CCCCC--ACCCCG-CTCCCCATATTGCC-ATAGAATTCCCAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34646420 40 + 59248254 CCCCC--ACCCCGCCCCCCCATATTGCC-ATAGAATTCCCAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513019 39 - 13342542 CCCCC--ACCCCG-CCCCCCATATTGCC-ATAGAATTCCCAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5443495 39 + 7714307 CCCCC--ACCCCG-CCCCCCATATTGCC-ATAGAATTCCCAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29250664 39 + 50890351 CCCCC--ACCCCG-CCCCCCATATTGCC-ATAGAATTCCCAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 874302 39 - 2385121 CCCCC--ACCCCG-CCCCCCATATTGCC-ATAGAATTCCCAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2310596 39 + 4274983 CCCCC--ACCCCG-CCCCCCATATTTCC-ATAGAATTCCCAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28542187 34 + 49145316 CCCCA-------C-CCCCCCATATTGCC-ATAGAATTCCCAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5387574 35 + 8899380 CCCCA------CC-CCCCCCATATTGCC-ATAGAATTCCCAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1596219 33 - 2680843 CCCCA---------CCCCCCATATTGCC-ATAGAATTCCCAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 347366 34 - 4471408 CCCCA-------C-CCCACCATATTGCC-ATAGAATTCCCAAA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5458108 31 + 5549422 -----------TT-TTCCCCTTATCGCTAATAGATTTTTCAAA i otoGar3.GL873654 C 0 I 382 s mm10.chr7 111075499 36 - 145441459 CCCAT--TTTTTT-CACCCTACACTGCC-ATAGATTTTTG--- i mm10.chr7 C 0 C 0 s canFam3.chr1 4598469 34 - 122678785 -------TGCTTT-TTTCATAAAGTTTA-AAAGATTTGTCAAA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 304425 34 + 643850 -------CCTTTT-CCCTCTATTTTGCC-AAAGATTTCCCAAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545064 43 + 2501019 I e micMur3.chr22 3946418 124 - 30143674 I a score=40914.000000 s hg38.chr19_GL383574v1_alt 56510 5 + 155864 C---TATT s panTro5.chr19 36125139 5 + 61309027 C---TATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871084 5 + 64411610 C---TATT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6288914 5 - 8369475 C---TATT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63881552 5 - 106955855 C---TATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30192721 5 + 53671032 C---TATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34646460 5 + 59248254 C---TATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513058 5 - 13342542 C---TATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5443534 5 + 7714307 C---TATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29250703 5 + 50890351 C---TATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 874341 5 - 2385121 C---TATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2310635 5 + 4274983 C---TATT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28542221 8 + 49145316 CTATTATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5387609 8 + 8899380 CTATTATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1596252 8 - 2680843 CTATTATT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 347400 8 - 4471408 CTATTATT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5458521 5 + 5549422 c---TGTT i otoGar3.GL873654 I 382 C 0 s canFam3.chr1 4598503 5 - 122678785 ---TTACT i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 304459 5 + 643850 C---TATT i dasNov3.JH563638 C 0 I 19 e proCoq1.NW_012149263v1 545064 43 + 2501019 I e micMur3.chr22 3946418 124 - 30143674 I e mm10.chr7 111075535 0 - 145441459 C a score=748119.000000 s hg38.chr19_GL383574v1_alt 56515 68 + 155864 CAGTACACT----TTA----ATTTCCAAGATTATTAA---------------------TTTGTACAG-ATGCTG-----------------GGGGGAGAGGTAG--ACAATTA-CCAT s panTro5.chr19 36125144 68 + 61309027 CAGTACACT----TTA----ATTTCCAAGATTATTAA---------------------TTTGTACAG-ATGCTG-----------------GGGGGAGAGGTAG--ACAATTA-CCAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871089 68 + 64411610 CAGTACACT----TTA----ATTTCCAAGATTATTAA---------------------TTTGTACAG-ATGCTG-----------------GGGGGAGAGGTAG--ACAATTA-CCAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6288919 68 - 8369475 CAGTACACT----TTA----ATTTCCAAGATTATTAA---------------------TTTGTACAG-ATGCTG-----------------GGGGGAGAGGTAG--ACAATTA-CCAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63881557 68 - 106955855 GAGTACACT----TTA----ATTTCCAAGATTATTAA---------------------TTTGTACAG-ATGTTG-----------------CGGGGAGAGGTAG--ACAATTA-CCGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30192726 68 + 53671032 CAGTACACT----TCA----ATTTCCAAGATTATTAA---------------------TTTGTACAG-ATTTTG-----------------GGGGGAGAAATAG--GCAATTA-CCAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34646465 68 + 59248254 CAGTACACT----TCA----ATTTCCAAGATTATTAA---------------------TTTGTACAG-ATTTTG-----------------GGGGGAGAAATAG--GCAATTA-CCAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513063 68 - 13342542 CAGTACACT----TCA----ATTTCCAAGATTATTAA---------------------TTTGTACAG-ATTTTG-----------------GGGGGAGAAATAG--GCAATTA-CCAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5443539 68 + 7714307 CAGTACACT----TCA----ATTTCCAAGATTATTAA---------------------TTTGTACAG-ATTTTG-----------------GGGGGAGAAATAG--ACAATTA-CCAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29250708 68 + 50890351 CAGTATGCT----TCA----ATTTCCAAGATTATTAA---------------------TTTGTACAG-ATTTTG-----------------GGGGGAGAAATAG--ACAATTA-CTAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 874346 68 - 2385121 CAGTACACT----TCA----ATTTCCAAGATTATTAA---------------------TTTGTACAG-ATTTTG-----------------GGGGGAGAAATAG--ACAATTA-CCAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2310640 68 + 4274983 CAGTATACT----TCA----ATTTCCAAGATTATTAA---------------------TTTGTACAG-ATTTTG-----------------GGGGGAGAAATAG--ATAATTA-CCAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28542229 67 + 49145316 CAATACACT----TTA----ATTTCCAAGGTTATTAA---------------------TTTGTACAT-GTGTTG------------------GGGGAGACGTAG--ACAGTTA-CCAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5387617 67 + 8899380 CAATACACT----TTA----ATTTCCAAGGTTATTAA---------------------TTTGTATAT-GTGTTG------------------GGGGAGATGTAG--ACAATTA-CTGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1596260 67 - 2680843 CAATACACT----TTA----ATTTCCAAGGTTATTAA---------------------TTTGTACAT-GTGTTG------------------GGGGAGATGTAG--ACAATTA-CCAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 347408 67 - 4471408 CAATACACT----TTA----ATTTCCAAGGTTATTAA---------------------TTTGTACAT-GTGTTG------------------GGGGAGACGTAG--ACAATTA-CCAT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 545107 72 + 2501019 CAATATACT----TTAATTAATTTCAAAGACGACTAA---------------------TTTGTACAA-ATGTTG-----------------GGAAGATAGGCAG--ACAATCA-TTAT i proCoq1.NW_012149263v1 I 43 I 3 s otoGar3.GL873654 5458526 63 + 5549422 TAATACTCT----TTAGTTGATTTCTAAGATTACTAA---------------------ATTGTGTAA-GTTTTG-----------------TG---------GG--GCAGTCA-TTAT i otoGar3.GL873654 C 0 I 3 s mm10.chr7 111075535 99 - 145441459 --------T----TTA----ATTT-TAGGGTTATTAATGTTAAGATTTATTTATTTATTTTGTATAGTGTTCTGCCTGCGTGTATGCCTGCAGGTCAGAAGAGG--GCTCTGATCCAT i mm10.chr7 C 0 C 0 s canFam3.chr1 4598510 75 - 122678785 TTATGCGCTTTCATTA----ATTTCCAGGATTATTCA---------------------TTTGCATGC-ATGTTG----------------CAGGGGAGGGATGGCAGCAGTTT-TTAT i canFam3.chr1 I 2 I 3 s dasNov3.JH563638 304483 66 + 643850 TAATATGAC----ATA----ATTTTCAGGATTA-------------------------TTTTTACAA-GTGTTA----------------CAGGAGGGTGGTAA-AACAATCA-TTAT i dasNov3.JH563638 I 19 C 0 e micMur3.chr22 3946418 124 - 30143674 I a score=4308877.000000 s hg38.chr19_GL383574v1_alt 56583 269 + 155864 CATTAAAATGCTGCATTACTTTATATCAT-----TG-AATAATG--TCAAACATTTTTTAAAA--------TT----TTTTTATCATTTAAAAACATCTCTTT--AAGCTGGAAGCTCTTTGACATCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACACAGGATACAAGATCTCTAAAAACACAGTTATCTCAAGGTAAGCTA-----------TCTCAT---CCCTAAAATATTTCCATTCTAAACTTTTATAGTGGTTTTTGTC--TTT s panTro5.chr19 36125212 269 + 61309027 CATTAAAATGCTGCATTACTTTATATCAT-----TG-AATAATG--TCAGACATTTTTTAAAA--------TT----TTTTTATCATTTAAAAACATCTCTTT--AAGCTGGAAGCTCTTTGACATCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACACAGGATACAAGATCTCTAAAAACACAGTTATCTCAAGGTAAGCTA-----------TCTCAT---CCCTAAAATATTTCCATTCTAAACTTTTATAGTGGTTTTTGTC--TTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871157 269 + 64411610 CATTAAAATGCTGCATTACTTTATATCAT-----TG-AATAATG--TCAAACATTTTTTAAAA--------TT----TTTTTATCATTTAAAAACATCTCTTT--AAGCTGGAAGCTCTTTGACATCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACACAGGATACAAGATCTCTAAAAACACAGTTATCTCAAGGTAAGCTA-----------TCTCAT---CCCTAAAATGTTTCCATTCTAAACTTTTATAGTGGTTTTTGTC--TTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6288987 269 - 8369475 CATTAAAATGCTGCATTACTTTATATCAT-----TG-AATAATG--TCAAACATTTTTTTAAA--------TT----TTTTTATCATTTAAAAACATCTCTTT--AAGCTGGAAGCTCTTTGACATCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACACAGGATACAAGATCTCTAAAAACACAGTTATCTCAAGGTAAGCTA-----------TCTCAT---CCCTAAAATATTTCCATTCTAAACTTTTATAGTGGTTTTTGTC--TTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63881625 271 - 106955855 CATTAAAATGCTGCATTACTTTGTGTCAT-----TG-AAAAACG--ATAAACATTTTTTAAAA--------TT----TTTTTATCATTTAAAAACATCTCTTT--AAGCTGGAAGCTCTTTGACATCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACACAGGATACAAGATCTCTAAAAACACAGTTATCTCAAGGTAAGCTA-----------TCTCAT---CCCTAAAATATTTCCATTCTAAACTTTTATAGTGGTTTTTGTCTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30192794 270 + 53671032 CATTAAAATGCTACATCACTTTATATCAT-----TG-AAAAATG--TAAAACATTTTTTTAAA--------TT----TTTTTATCATTTAAAAAAATCTCTTT--AAGCTGGAAACTCTTTGACGTCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACACAGGATTCAAGATCTCTAAAAACACAGTTATCTCAAGGTAAGCTA-----------TCTCAT----CCTAAAGTATTTCCATTCTAAACTTCTATAGTGGTTTTTCTCTTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34646533 270 + 59248254 CATTAAAATGCTACATTACTTTATATCAT-----TG-AAAAATG--TAAAACATTTTTTTAAA--------TT----TTTTTATCATTTAAAAAAATCTCTTT--AAGCTGGAAACTCTTTGACGTCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACACAGGATTCAAGATCTCTAAAAACACAGTTATCTCAAGGTAAGCTA-----------TCTCAT----CCTAAAGTATTTCCATTCTAAACTTCTATAGTGGTTTTTCTCTTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513131 270 - 13342542 CATTAAAATGCTACATTACTTTATATCAT-----TG-AAAAATG--TAAAACATTTTTTTAAA--------TT----TTTTTATCATTTAAAAAAATCTCTTT--AAGCTGGAAACTCTTTGACGTCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACACAGGATTCAAGATCTCTAAAAACACAGTTATCTCAAGGTAAGCTA-----------TCTCAT----CCTAAAGTATTTCCATTCTAAACTTCTATAGTGGTTTTTCTCTTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5443607 270 + 7714307 CATTAAAATGCTACATTACTTTATATCAT-----TG-AAAAATG--TAAAACATTTTTTTAAA--------TT----TTTTTATCATTTAAAAAAATCTCTTT--AAGCTGGAAACTCTTTGACGTCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACACAGGATTCAAGATCTCTAAAAACACAGTTATCTCAAGGTAAGCTA-----------TCTCAT----CCTAAAGTATTTCCATTCTAAACTTCTATAGTGGTTTTTCTCTTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29250776 270 + 50890351 CATTAAAATGCTACATTACTTTATGTGAT-----TG-AAAAATG--TAAAACATTTTTTAAAA--------TC----TTTTTATCATTTAAAAAAATCTCTTT--AAGCTGGAAACTCTTTGACGTCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACACAGGATTCAAGATCTCTAAAAACACAGTTATCTCAAGGTAAGCTA-----------TCTCAT----CCTAAAGTATTTCCATTCTAAACTTCTATAGTGGTTTTTCTCTTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 874414 270 - 2385121 CATTAAAATGCTACATTACTTTATATCAT-----TG-AAAAATG--TAAAACATTTTTTAAAA--------TT----TTTTTATCATTTAAAAAAATCTCTTG--AAGCTGGAAACTCTTTGACGTCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACACAGGATTCAAGATCTCTAAAAACACAGTTATCTCAAGGTAAGCTA-----------TCTCAT----CCTAAAGTATTTCCATTCTAAACTTCTATAGTGGTTTTTCTCTTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2310708 270 + 4274983 CATTAAAATGCTACATTACTTTATATCAT-----TG-AAAAATG--TAAAACATTTTTTAAAA--------TT----TTTTTATCATTTAACAAAATCTCTTT--AAGCTGGAAACTCTTTGACGTCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACGCAGGATACAAGATCTCTAAAAACACAGTTATCTCAAGGTAAGCTA-----------TCTCAT----CCTAAAGTATTTCCATTCTAAACTTCTATAGTGGTTTTTGTCTTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28542296 281 + 49145316 CAGTAAAATGCTACGTTACTTTGTATCAT-----TG-AAAAACG--TAAAATGttttttttaa--------t-----tttttatcatttaaaaaaatCTCTTT--AAGCTGGAAGCTCTTTGACATCCTTTGGAACAGAGACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACACAGGATACAAGATCCCTAAAAACACAGTTATCTCAAGGTAAGCTGAATGAAAATATTTTTAG---AATGAAAATGTTTTTATTGTAAACTTCTAGAGTGGTTTTTATCTTTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5387684 270 + 8899380 CATTAAAATGCTACATTACTTTGTATCAT-----TG-AAAAATG--TAAAACATTTTTTTGAA--------T-----TTCTTATCATTAAAAAAAATCTCTTT--AAGCCGGAAGCTCTTTGACATCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACACAGGATACAAGATCCCTAAAAACACAGTTATCTCAAGGTAAGCTG-----------TCTCAT---CCCTAAAATATTTTCATTCTATACTTCTATAGTGATTTTTGTCTTTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1596327 270 - 2680843 CATTAAAATGCTATGTTACTTTGTATCAT-----TG-AAAAATG--TAAAACATTTTTTTAAA--------T-----TTTTTATCATTTAAAAAAATCTCTTT--AAGCTGGAAGCTCTTTGACATCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACACAGGATACAAGATCCCTAAAAACACAGTTATCTCAAGGTAAGCTG-----------TCTCAT---CCCTAAAATATTTTAATTCTAAACTTCTATAGTGGTTTTTATCTTTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 347475 270 - 4471408 CATTAAAATGCTACGTTACTTTGTATCAT-----TG-AAAAATG--TAAAACATTTTTTTAAA--------T-----TTTTTATCATTTAAAAAAATCTCTTT--AAGCTGGAAGCTCTTTGACATCCTTTGGAACAGAAACATCAAACAGTGGTACCTTACCCCAAAGTAGTGCGGTTGGTTCTGCCTTTACACAGGATACAAGATCCCTAAAAACACAGTTATCTCAAGGTAAGCTG-----------TCTCAT---CCCTAAAATATTTTCATTCTAAACTTCTATAGTGGTTTTTATCTTTTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3946542 264 - 30143674 CATTAAAATGCTATATTACATTATATAAG-----TCAAAAGATA--TAAAAGA-TTTTTAAAA--------AT----TTTTTATCATTTAAAAAAA----CTC--AAGCTGGAAGCTCCTTGACATCCTTTGGAACAGAAACATCGAACAGTGGCACCTTACCCCACAGCAGTGCAGCTGGCTCTGCCTTCACACAGGACACAAGGTCCCTAAAGACACAGCCATCTCAAGGTGAGCTG------------GTTTT---CCTTCCAGGATTTCCATTTTAAGCTCCTATAGTGGTTTTTGTCTTT-- i micMur3.chr22 I 124 I 2 s proCoq1.NW_012149263v1 545182 267 + 2501019 CATTAAAATGCTGTATCACATTGCATAAT-----TC-AAAGATA--TAAAATATTTTTTAAAA--------AT----TTTTTATCATTTAAAAAAA----ATCTGAAGCTGGAAGCTCCTTGACATCCTTTGGAACAGAAACATCAAACAGTGGTACCTTAACTCAAAGTAGCGCAGTTGGTTCTGCCTTTACACAGGATACAAGATCTCTAAAGACACAGTTATCTCAAGGTAAGCTG-----------TTTTTT---CCTTCCAGTATTTCCATTTTAAACTCCTATAGTGGTTTTTGTCTTT-- i proCoq1.NW_012149263v1 I 3 I 2 s otoGar3.GL873654 5458592 250 + 5549422 TATTAAAATGTTATATTGCCGTATATAAT-----TG-AAAGTTG--TAAA----TTTTT-------------T----TTTTTATCCC-------------CTC--AAGCTGGAAGCTCCTTGACCTCCTTTGGAACAGAAACATCAAACAGTGGCACCTTATCCCAAAGCAGCGCAGTGGGCTCTGCCTTTACACAGGATACAAGATCTCTGAAAACACAGTTATCTCAAGGTAAGTTT-----------TTTTTTTCCCCTTCAAGTATTTCCATTCTAAACTCCTATAGTGGTTTTTACCTTT-- i otoGar3.GL873654 I 3 I 113 s mm10.chr7 111075634 266 - 145441459 CTCTCTAGCTCAGGATTTTTAAGTTTTAT-AAAGTG-CAGAGTGACCAAGACAATCAGTAAAA--------------TGCTGATCTTTTTAAA--ATCTTTTC--AAGCTGGAAACTCTTTGACATCCTTTGGAACAGAAGCATCAAATAGTGGTACCTTATCCCAGAGCAATGCAGTTGGTTCGGCCTTCACACAAGACACAAGATCTGTAAAACCACAGCTAGCCCAAGGTAAGCTG-----------CACTGC---CCATTGAATACT----TGCCAAACTTCTATAGTAGTTTTTGCCTT--- i mm10.chr7 C 0 C 0 s canFam3.chr1 4598588 272 - 122678785 CATTAAAATGGTATATTACTTTATGTAAT-----TG-AAAAGTT--TAAA-------TTAAAAAATACATGTT----TTTTTGTCATTAAAAAAAATCTCTTA--AAGCTGGAAGCTCTTTGACATCCTTTGGAACAGAAACATCAAACAGTGGTACCCTATCCCAAAGTAGTGCAGTTGGTTCTGCCTTTACACAGGATACAAGATCACTAAAAACACAGTTATCTCAAGGTAAGCTT-----------TTTTTT---CCTTTGTATGTTTCCATTCATAACATCTTTAGTGGTCTTTGTCTTTCT i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 304549 275 + 643850 TGCTAAAATGTTATATTACTTTATATAACTGAAGTG-AAAAGtt--taaaattttatttttct--------ttttaatttttttcattaaaaaaaatCTCA----AAGCTGGAAGCTCCTTGACATCATTTGGAACAGAAACATCAAACAGCGGTACCTTATCCCAAAGTAGTGCTGTTGGCTCTGCCTTTACACAGGATTCAAGAGCTCTGAAAACACAGTTATCTCAAGGTAAACTT-----------TTT--T---CCTTCAAATATACCCCTTCTAAACTTTTAGAATGGTTTTT-TCTTTCT i dasNov3.JH563638 C 0 C 0 a score=489052.000000 s hg38.chr19_GL383574v1_alt 56852 53 + 155864 CTGAATGTAAG---AGCTTTTGCAGCTTGTAAATCGCGTGTATAATTTCTATTTGG s panTro5.chr19 36125481 53 + 61309027 CTGAATGTAAG---AGCTTTTGCAGCTTGTAAATCACGTGTATAATTTCTGTTTGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871426 53 + 64411610 CTGAATGTAAG---AGCTTTTGCAGCTTGTAAATCACGTGTATAATTTCTGTTTGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6289256 53 - 8369475 CTGAATGTAAG---AGCTTTTGCAGCTTGTAAATCACGTGTATAATTTCTATTTGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63881896 53 - 106955855 CTGAATGTAAG---AGCTTTTGCAGCTTGTAAATCACGTGTATAATTTCTATTTGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30193064 26 + 53671032 CTGAATGTAAG---AGCTTTTGCAGCTTG--------------------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34646803 26 + 59248254 CTGAATGTAAG---AGCTTTTGCAGCTTG--------------------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513401 26 - 13342542 CTGAATGTAAG---AGCTTTTGCAGCTTG--------------------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5443877 26 + 7714307 CTGAATGTAAG---AGCTTTTGCAGCTTG--------------------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29251046 26 + 50890351 CTGAATGTAAG---AGCTTTTGCAGCTTG--------------------------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 874684 26 - 2385121 CTAAATGTAAG---AGCTTTTGCAGCTTG--------------------------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2310978 53 + 4274983 CTGAATGTAAG---AGCTTTTGCAGCTTGTAAATTACGTGTATAATTTCTATTTGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28542577 53 + 49145316 CTAAATGTCAG---AGCTTTTGCAGCTTGTAAATCACGTGTATAATTTCTATTTGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5387954 53 + 8899380 CTAAATGTCAG---AGTTTTTGCAGCTTGTAAATCACATGTATAATTTCTATTTGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1596597 53 - 2680843 CTAAATGTCAG---AGTTTTTGCAGCTTGTAAATCACGTGTATAATTTCCATTTGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 347745 53 - 4471408 CTAAATGTCAG---AGCTTTTGCAGCTTGTAAATCACGTGTATAATTTCTATTTGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3946808 56 - 30143674 CTGAATGTAAGAAGAGTTCTTGTAGCTTGTGAATCACATGTGTAATTTCTATTTGG i micMur3.chr22 I 2 I 93 s proCoq1.NW_012149263v1 545451 44 + 2501019 CTGAATGTAAG------------AGCTTGTAAATCACATGTATCATTTCTATTTGG i proCoq1.NW_012149263v1 I 2 C 0 s otoGar3.GL873654 5458955 51 + 5549422 CTGAATTTAAG---AACTCTTAATACTTGTTAATC-CTTATGTAATTTCTATTTG- i otoGar3.GL873654 I 113 C 0 s mm10.chr7 111075900 41 - 145441459 ---------------GCTCTGAAGATTTATAAACAACATATATCATTGGTGTTTGC i mm10.chr7 C 0 C 0 s canFam3.chr1 4598860 53 - 122678785 CTGAATGTAAG---ACCTTTTACAGCTTGCAAATCACATGTATACTTTCTATTTGG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 304824 53 + 643850 CTAAGTGTAAG---AGTCTTTACAGTTTGTATATTATATGTATAATTTCTCTTTGG i dasNov3.JH563638 C 0 C 0 a score=272027.000000 s hg38.chr19_GL383574v1_alt 56905 32 + 155864 CTCTTTTAAAATTTTT--CTCCAAATCGCTGTAT s panTro5.chr19 36125534 32 + 61309027 CTCTTTTAAAATTTTT--CTCCAAATCGCTGTAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871479 32 + 64411610 CTCTTTTAAAATTTTT--CTCCAAATCGCTGTAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6289309 32 - 8369475 CTCTTTTAAAATTTTT--CTCCAAATCGCTGTAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63881949 32 - 106955855 TTCCTTTAAAAATTTT--CTCCAAATTGCTGTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30193090 26 + 53671032 ------TAAAAGTTTT--CTCCAAATTGGTGTAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34646829 26 + 59248254 ------TAAAAGTTTT--CTCCAAATTGGTGTAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513427 26 - 13342542 ------TAAAAGTTTT--CTCCAAATTGGTGTAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5443903 26 + 7714307 ------TAAAAGTTTT--CTCCAAATTGGTGTAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29251072 26 + 50890351 ------TAAAAGTTTT--CTCCAAATTGGTGTAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 874710 26 - 2385121 ------TAAAAGTTTT--CTCCAAATTGGTGTAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2311031 32 + 4274983 TTCTTTTAAAAGTTTT--CTCCAAATTGCTGTAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28542630 27 + 49145316 TTCTT-----ATTTTT--TTCCCAATTGCTGTAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5388007 27 + 8899380 TTCTT-----ATTTTT--CTCCCAATTGCTGTAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1596650 27 - 2680843 TTCTT-----ATTTTT--CTCCCAATTGCTGTAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 347798 27 - 4471408 TTCTT-----ATTTGT--CTCCCAATTGCTGTAT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 545495 28 + 2501019 ------TGTTTGTTTTTCCTCCCATTTGCTGTAT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5459006 27 + 5549422 -----CTGAAGGTTTT--CTCCCAGTTACTGTAT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111075941 32 - 145441459 CTCTTTAAAttttttt--ttacagatttatttat i mm10.chr7 C 0 I 328 s canFam3.chr1 4598913 30 - 122678785 TCCTTTTAAGATTTTT--CTCCTAATTGCTGT-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 304877 32 + 643850 TTCTTTTTAAATATTT--CTTCCAGTTGCACTAC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3946864 93 - 30143674 I a score=611114.000000 s hg38.chr19_GL383574v1_alt 56937 45 + 155864 TGCAATGAATATATTATTGAAT--------------------GACTCTCACTATTT-AGACTTATT s panTro5.chr19 36125566 43 + 61309027 TGCAATGAATATATTATTGAAT--------------------GA--CTCACTATTT-AGACTTATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871511 45 + 64411610 TGCAATGAATATATTATTGAAT--------------------GACTCTCACTATTT-AGACTTATT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6289341 44 - 8369475 TGCAATGAATATATTATTGAAT--------------------GACTC-CACTATTT-AGACTTATT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63881981 45 - 106955855 TGCAATGAATATATTATTGAAT--------------------GGCTCTCACTATTT-AGACTTATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30193116 45 + 53671032 TGCAATGAATATATTATTGAAT--------------------GACTCTCACTATTT-AGACTTATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34646855 45 + 59248254 TGCAATGAATATATTATTGAAT--------------------GACTCTCACTATTT-AGACTTATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513453 45 - 13342542 TGCAATGAATATATTATTGAAT--------------------GACTCTCACTATTT-AGACTTATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5443929 45 + 7714307 TGCAATGAATATATTATTGAAT--------------------GACTCTCACTATTT-AGACTTATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29251098 45 + 50890351 TGCAATGAATATATTATTGAAT--------------------GACTCTTACTATTT-AGACTTATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 874736 45 - 2385121 TGCAATGAATATATTATTGAAT--------------------GACTCTCACTATTT-AGACTTATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2311063 41 + 4274983 TGCAATGAATATATTATTGAAT--------------------GACT----CTATTT-AGACTTATT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28542657 45 + 49145316 TGCAATGAATATACTATTGAAT--------------------GACTCCCACTATTT-AGCCTTATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5388034 45 + 8899380 TGCAATAACTATATTATTGAAT--------------------GACTTCCACTATTT-AGCCTTATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1596677 45 - 2680843 TGCAATGAATATACTATTGAAT--------------------GATTGGCACTATTT-AGCCTTATT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 347825 45 - 4471408 TGCAATGAATATACTATTGAAT--------------------GACTCCCACTATTT-AACCTTATT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 545523 65 + 2501019 TGCAATAAATATTTTATTGAATGACCTAGTATAGTCTAAGTAGACTCCTACTATTT-AGACTTTTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5459033 45 + 5549422 TGCAATAAATATTTTATTGAAT--------------------GTGTCCCACTGTTT-AGACTTTTC i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111076301 40 - 145441459 TACAATAAATGTTTTGTTGAAT--------------------GGCTTCTACTATTT-----TTTT- i mm10.chr7 I 328 C 0 s canFam3.chr1 4598943 46 - 122678785 TGCAATGAGAATATTATTGAAT--------------------GACATGCATTATTTAAGACTCTTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 304909 46 + 643850 TGAAACAAATGCATTGTTGAAT--------------------GGCTTCTACAATTTAAGACTTTTT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3946864 93 - 30143674 I a score=2274254.000000 s hg38.chr19_GL383574v1_alt 56982 160 + 155864 ACAGTTCTTAGATCATGAAACTGAAAT------GCTGAGCATTCT-CTAAGTTGGAC---TTTTTTTGC----AAAGCAATTATATAACTTGTATGTAACACTTAAATATATCAAATTAGGCTCATACTCACCATTAA-AG-TTGAGCTATCCAAGATGAATTGGAAA-TATCATCT s panTro5.chr19 36125609 160 + 61309027 ACAGTTCTTAGATCATGAAACTGAAGT------GCTGAGCATTCT-CTAAGTTGGAC---TTTTTTTGC----AAAGCAATTATATAACTTGTATGTAACACTTAAATATATCAAATTAGGCTCATACTCACCATTAA-AG-TTGAGCTATCCAAGATGAATTGGAAA-TATCATCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871556 160 + 64411610 ACAGTTCTTAGATCATGAAACTGAAAT------GCTGAGCATTCT-CTAAGTTGGAC---TTTTTTTGC----AAAGCAATTATATAACTTGTATGTAACACTTAAATATATCAAATTAGGCTCATACTCACCATTAA-AG-TTGAGCTATCCAAGATGAATTGGAAA-TATCATCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6289385 160 - 8369475 ACAGTTCTTAGATCATGAAACTGAAAT------GCTGAGCATTCT-CTAAGTTGGAC---TTTTTTTGC----AAAGCAATTATATAACTTGTATGTAACACTTAAATATATCAAATTAGGCTCAGACTCACCATTAA-AG-TTGAGCTGTCCAAGATGAATTGGAAA-TATCATCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63882026 160 - 106955855 ACAGTTCTTAGATCATGAAACTGAAAT------GCTGAGCATTCT-CTAAGTTGGAC---ATTTTTTGC----AAAGCAATTATATAACTTGTATGTAACACTTAAATATATCAAATTGGGCTCAGACTCACCATTAA-AG-TTGAGCTATCCAAGATGAATTGGAAA-TATCATCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30193161 161 + 53671032 ACAGTTCTTAGATCATGAAACTAAAAA------GTTGAGCATTCT-CTAAGTTGGAC---TTTTTTTGC----AAAGAAATTATATAACTTGTATGTAACACTGAAATATATCAAATTAGGCTCAGGCTCACCATTAATAG-TTGAGCTATCCAAGATGAATTGGAAA-TATCATCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34646900 160 + 59248254 ACAGTTCTTAGATCATGAAACTAAAAA------GTTGAGCATTCT-CTAAGTTGGAC---TTTTTTTGC----AAAGAAATTATATAACTTGTATGTAACACTGAAATATATCAAATTAGGCTCAGACTCACCATTAA-AG-TTGAGCTATCCAAGATGAATTGGAAA-TATCATCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513498 160 - 13342542 ACAGTTCTTAGATCATGAAACTAAAAA------GTTGAGCATTCT-CTAAGTTGGAC---TTTTTTTGC----AAAGAAATTATATAACTTGTATGTAACACTGAAATATATCAAATTAGGCTCAGACTCACCATTAA-AG-TTGAGCTATCCAAGATGAATTGGAAA-TATCATCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5443974 160 + 7714307 ACAGTTCTTAGATCATGAAACTAAAAA------GTTGAGCATTCT-CTAAGTTGGAC---TTTTTTTGC----AAAGAAATTATATAACTTGTATGTAACACTGAAATATATCAAATTAGGTTCAGACTCACCATTAA-AG-TTGAGCTATCCAAGATGAATTGGAAA-TATCATCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29251143 160 + 50890351 ACAGTTCTTAGATCATGAAACTAAAAA------GTTGAGCATTCT-CTCAGTTGGAC---TTTTTTTGC----AAAGAAATTATATAACTTGTATGTAACTCTTAAATATATCAAATTAGGCTCAGACTCACCATTAA-AG-TTGAGCTATCCAAGATGAATTGGAAA-TATCATCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 874781 160 - 2385121 ACAGTTCTTAGATCATGAAACTAAAAA------GTTGAGCATTCT-CTAAGTTGGAC---TTTTTTTGC----AAAGAAATTATATAACTTGTATGTAACACTTAAATATATCAAATTAGGCTCAGACTCACCATTAA-AG-TTGAGCTATCCAAGATGAATTGGAAA-TATCATCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2311104 160 + 4274983 ACAGTTCTTAGATTATGAAACTAAAAA------GTTGAGCATTCT-CTAAGTTGGAC---TTTTTTTGC----AAAGAAATTATATAACTTGTATGTAACACTTAAATATATCACATTAGGCTCAGACTCACCATTAA-AG-TTGAGCTATCCAAGATGAATTGGAAA-TATCGTCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28542702 162 + 49145316 ACAATTCTTAGATCATAAAACTGAAAT------GCTGAGCATTCT-CTAAATTGGAC-TTTTTTTTTGC----AAAGCAATTATATAACTTGTATGTAACACTTAAATATATCAAATTAGGCTCGGATTCACCATTAA-AG-TTGAGCTATCCAAGATGAATTGGAAA-TACCATCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5388079 156 + 8899380 ACAATTCTTAGATCATAAAACTGAAAT------GCTGAGCATTCT-CTAAGTTGGAC--TTTATTTTGC----AAAGCA-----ATAACTTGTATGTAACACTTAAATATATCAAATTAGGCTCAGATTCATCATTAA-AG-TTGAGCTATCCAAGATGAATTGGAAA-TACCATCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1596722 161 - 2680843 AGAATTCTTAGATCATAAAACTGAAAT------GCTGAGCATTCT-CTAAGTTGGAC--TTTTTTTTGC----AAAGCAATTATATAACTTGTATGTCACACTTAAGTGTATCAAATTAGGCTCAGATTCACCATTAA-AG-TTGAGCTATCCAAGATGAATTGGAAA-TACCATCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 347870 161 - 4471408 ACAATTCTCAGATCATAAAACTGAAAA------GCTGAGCATTCT-CTAAGTTGGAC--TTTTTTTTGC----AAAGCAATTATATAACTTGTATGTAACACTTAAATATATCAAATTAGGCTCAGATTCACCATTAA-AG-TTGAGCTATCCAAGATGAATTGGAAA-TACCATCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3946957 168 - 30143674 ACAGTTCTTAGATCATGAAACTGAAATGGGGGGGGAGGGCATTCTCCCAAGTTTGACTTTTTTTTTTTT----AAAGCAATTATTAAACTGGCATACA--ACTTAAATGTACCAAATCAGTCCCAGACTCAACATTGA-AA-ATGAGGTATCCTAGATGAATTTGAAG-TATCATTT i micMur3.chr22 I 93 I 2 s proCoq1.NW_012149263v1 545588 158 + 2501019 ACAGTTCTTAGATCATGAAACTGAAA-------GGGGAGCTTTCT-CCAAGTTTGAC----TTTTTTTT----AAAGCAGTTATTAAATTTGCATACGACACTTAAATATATCAAATCAGTCCCAGACTCACCATTGA-AG-ATGAGCTATCCTAGGTGAATTTGAAG-TATCATTT i proCoq1.NW_012149263v1 C 0 I 28 s otoGar3.GL873654 5459079 156 + 5549422 GCAGTTCTTAGGTCATAAAACTGAAAT------GGTAGTCATTCT-TAAAGTTTGATATTTTTTTTTTTTGGCAAAGCAGTTATTAAACTTGCATGTAACACTCAAATTC-----ATCAGTCCAAGACTCACCATTGA-AG-TTGAGTTACCCTAGAAGACTTAGAAA-GA------ i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111076341 126 - 145441459 TTAATTTTTATGCATTGAAATTGAAAT------AATATGCATTGT------TTAGCA---TTTGTTTGC----AAAG------------TTG------------------ATCAGATTAGTCCCAGATTTGCCACTGA-AGACTGAACTGTAGTAGGTTAATTTGATA-ACCCATCC i mm10.chr7 C 0 I 3 s canFam3.chr1 4598989 161 - 122678785 ACAATTCTGAGATCATAAAACTGGGAACC----AGTGAACATTCT-CTAAGCTTGGC--ACTTTTTTGT----AATGCAATTATATGACTTGTATATAATACTTACATATATCTAATTAGTACCAGCATCACCACTCA-AG-ATGAACTATTCTTGATAACTTG--AA-TGGCAGCT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 304955 148 + 643850 ACAATGTATAGATCACGAAACTGAAAT------GATGAGCATTCT-CAAATTTAACTTTTTTTTTTTGC----AGAGTAATTATATAAATTGTATA-GTCACTTGAATATATCAAGTCAGTCC----------------CA-TTGAACTATCCCTGATGAATTGGAAGTTATCAGCT i dasNov3.JH563638 C 0 C 0 a score=204953.000000 s hg38.chr19_GL383574v1_alt 57142 24 + 155864 ----G-AAAAAAAC-------TGTAT---TATGCTGTTA s panTro5.chr19 36125769 23 + 61309027 ----G-AAAAAAAC-------TGTAT---TATGCTGTT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871716 23 + 64411610 ----G-AAAAAAAC-------TGTAT---TATGCTGTT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6289545 23 - 8369475 ----G-AAAAAAAC-------TGTAT---TGTGCTGTT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63882186 23 - 106955855 ----G-AAAAAAAC-------TGTAT---TATGCTGTT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30193322 25 + 53671032 ----G-AAAAAAACT-----GTGTAT---TATGCTGTT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34647060 25 + 59248254 ----G-AAAAAAACT-----GTGTAT---TATGCTGTT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513658 25 - 13342542 ----G-AAAAAAACT-----GTGTAT---TATGCTGTT- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5444134 25 + 7714307 ----G-AAAAAAACT-----GTGTAT---TATGCTGTT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29251303 23 + 50890351 ----G-AAAAAAAC-------TGTAT---TATGCTGTT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 874941 25 - 2385121 ----G-AAAAAAACT-----GTGTAT---TATGCTGTT- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2311264 25 + 4274983 ----G-AAAAAAACT-----GTGTAT---TATGCTGTT- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28542864 26 + 49145316 ----GAAAAAAAACT-----GTGTAT---TGTGCTGTT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5388235 25 + 8899380 ----G-AAAAAAACT-----GTGTAT---TGTGCTGTT- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1596883 24 - 2680843 ----G--AAAAAACT-----GTGTAC---TGTGCTGTT- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348031 25 - 4471408 ----G-AAAAAAACT-----GTGTAT---TGTGCTGTT- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3947127 27 - 30143674 ----G-AAAAAAACC---CTATTTGT---TATACTTTT- i micMur3.chr22 I 2 C 0 s otoGar3.GL873654 5459235 24 + 5549422 ------AAACAAACC-----ATTCAT---TACGCTGCT- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111076470 28 - 145441459 ----G-ACGTAAACT-----GTTGATACGCGTGTTTTT- i mm10.chr7 I 3 I 2 s canFam3.chr1 4599150 28 - 122678785 -----TAAAAAAACC--AAACTGTTT---TATGCTGTT- i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 305103 34 + 643850 GTAAA-AAACAAACTACAGTATTCAT---TTTTCTGTT- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545746 28 + 2501019 I a score=1200819.000000 s hg38.chr19_GL383574v1_alt 57166 76 + 155864 ACATTTTCCCTA----ACATCCTCACAGGATGGAGAGTagtggttctcagtgtaggctacccacaactga---atcatctggg s panTro5.chr19 36125792 76 + 61309027 ACATTTTCCCTA----ACATCCTCACAGGATGGAGAGTagtggttctcagtgtaggctacccacaactga---atcatctggg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871739 76 + 64411610 ACATTTTCCCTA----ACATCCTCACAGGATGGAGAGTagtggttctcagtgtaggctacccacaactga---atcatctggg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6289568 76 - 8369475 ACATTTTCCCTA----ACATCCTCACAGGATGGAGAGTagtggttctcagtgtaggctacccacaactga---atcatctggg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63882209 76 - 106955855 ACATTTTCCCTA----ACGTCCTCACAGGATGGAGAGTagtggttctcagtgtaggccacccacaactga---atcatctggg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30193347 76 + 53671032 ACATTTTCCCTA----ACATCCCCACAGGATGGAGAGTagtagttctcaatgtaggccacccacaactga---atcatctggg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34647085 76 + 59248254 ACATTTTCCCTA----ACATCCCCACAGGATGGAGAGTagtagttctcaatgtaggccacccacaactga---atcatctggg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513683 76 - 13342542 ACATTTTCCCTA----ACATCCCCACAGGATGGAGAGTagtagttctcaatgtaggccacccacaactga---atcatctggg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5444159 76 + 7714307 ACATTTTCCCTA----ACATCCCCACAGGATGGAGAGTagtagttctcaatgtaggccacccacaactga---atcatctggg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29251326 76 + 50890351 ACATTTTCTCTA----ACATCCCCACAGGATGGAGAGTagtagttctcaatgtaggccacccacaactga---atcatctggg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 874966 76 - 2385121 ACATTTTCCCTA----ACATCCCCACAGGATGGAGAGTagtagttctcagtgtaggccacccacaactga---atcatctggg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2311289 76 + 4274983 ACATTTTCCCTA----ACATCCCCACAGGATGGAGAGTagtagttctcaatgtaggccacccacaacgga---atcatctggg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28542890 76 + 49145316 ACATTTCCCCTA----ACATCCTCACAGGATGGAGAGTagtggttctcaatgtaggccacctacaactga---atcatctggg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5388260 76 + 8899380 ACATTTCCCCTA----ACATCCTCAAAGGATGGAGAGTagtggttctcaatgtaggccacctacaactga---atcatctggg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1596907 76 - 2680843 TCATTTCCCCTG----ACATCCTCACAGGATGGAGAGTagtggttctcaatgtaggccatgtacaactga---atcatctggg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348056 76 - 4471408 ACATTTCCCCTA----ACATCCTCACAAGATGGAGAGTagtggttctcaatgtaggccacctacaactga---atcatctggg i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3947154 76 - 30143674 GCATTTTCCCTA----ACATCCTCGGAGGACGTAAAGcagtggttctcagtgtggactgcccacaactga---atcatctgga i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 545774 76 + 2501019 CTATCTTCCCTA----ACATCCTCACAGGATGTAGAGcagtggttctcagtgtgtcctccccacaactga---atcacctgga i proCoq1.NW_012149263v1 I 28 C 0 s otoGar3.GL873654 5459259 80 + 5549422 GCATCTCCCCTACCTCCCATCCTCACAGGAGGTAGAGCAGTGGTTCTCAGCGCGGACTGCCCACAACTGA---ATTATCTGAG i otoGar3.GL873654 C 0 I 1239 s mm10.chr7 111076500 71 - 145441459 GAATCTTACCTG----ACA-CCCCACAGGATATAAATGCATCTGTCTCTGTG----ATTACCACAGAAGA---ACCATCTTGT i mm10.chr7 I 2 I 1 s canFam3.chr1 4599179 78 - 122678785 -GGTCTTTCCTA----GCATGCTCACAGAATCTAGAGcagtggttcttagtgtgggctacccacaaccaaatcatcatctggg i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 305137 76 + 643850 GCCTGCTTTCTT----GTGCCCTCACAGTACATAAAATAGTGATTTTCACTGTGGAACACCCACGAAagg---atcatctggg i dasNov3.JH563638 C 0 C 0 a score=419673.000000 s hg38.chr19_GL383574v1_alt 57242 27 + 155864 gtgcttcttaaaaatttaaatc----c----tgag s panTro5.chr19 36125868 27 + 61309027 gtgcttcttaaaaatttaaatc----c----tgag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871815 27 + 64411610 gtgcttcttaaaaatttaaatc----c----tgag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6289644 27 - 8369475 gtgcttcttaaaaatttaaatc----c----tgag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63882285 27 - 106955855 gtgcttcttaaaaatttaaatc----c----tgag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30193423 27 + 53671032 ttgcttcttaaaaatttaaatc----c----tgag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34647161 27 + 59248254 ttgcttcttaaaaatttaaatc----c----tgag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513759 27 - 13342542 ttgcttcttaaaaatttaaatc----c----tgag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5444235 27 + 7714307 ttgcttcttaaaaatttaaatc----c----tgag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29251402 27 + 50890351 ttgcttcttaaaaatttaaatc----c----tgag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 875042 27 - 2385121 ttgcttcttaaaaatttaaatc----c----tgag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2311365 27 + 4274983 ttgcttcttaaaaatttaaatc----c----tgag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28542966 27 + 49145316 gtgcttcttaaaaatttaaatc----c----tgag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5388336 27 + 8899380 gcgcttcttaaaaatttaaatc----c----tgag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1596983 27 - 2680843 gtgcttcttaaaaatTTAAATC----C----TGAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348132 27 - 4471408 gtgcttcttaaaaatttaaatc----c----tgag i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3947230 27 - 30143674 atgcttcttaaaaattcagatc----c----tgag i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 545850 31 + 2501019 gtgcttcttaaaaattcagatcctaac----tgag i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111076572 29 - 145441459 GTGCTTC-TGAGAATGCAGGTC----C-ACTTGAG i mm10.chr7 I 1 C 0 s canFam3.chr1 4599257 27 - 122678785 gtgcttcttaaacatgtaaatc----c----tggg i canFam3.chr1 C 0 I 432 s dasNov3.JH563638 305213 31 + 643850 gtgcttcttaaaaatgcaggtc----ctatttggg i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5459339 1239 + 5549422 I a score=332236.000000 s hg38.chr19_GL383574v1_alt 57269 27 + 155864 ----acttatacatcagaatccc----tggagcct s panTro5.chr19 36125895 27 + 61309027 ----acttatacatcagaatgcc----tggagcct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871842 27 + 64411610 ----acttatacatcagaatccc----tggagCCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6289671 27 - 8369475 ----acttatacatcagaatccc----tggagCCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63882312 27 - 106955855 ----acttacacatcagaatccc----tgaggcct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30193450 27 + 53671032 ----acttatacatcagaatacc----tggagcct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34647188 27 + 59248254 ----acttatacatcagaatacc----tggagcct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513786 27 - 13342542 ----acttatacatcagaatacc----tggagcct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5444262 27 + 7714307 ----acttatacatcagaatacc----tggagcct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29251429 27 + 50890351 ----acttatacatcagaatacc----tggagcct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 875069 27 - 2385121 ----acttatacatcagaatacc----tggagcct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2311392 31 + 4274983 ----acttatacatcagaatacctggatggagcct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28542993 27 + 49145316 ----acttacacatcagaatccc----tggagcct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5388363 27 + 8899380 ----acttacacatcagaatccc----tggagcct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1597010 27 - 2680843 ----ACTTACACATCAAAATCCC----AGGAGCCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348159 27 - 4471408 ----acttacacatcagaatccc----tggagcct i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3947257 25 - 30143674 ----acct--acatcagaatccc----tagagcct i micMur3.chr22 C 0 I 530 s proCoq1.NW_012149263v1 545881 25 + 2501019 ----acct--gcatcagaatctc----tggagcct i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111076601 25 - 145441459 ----ATCTGGAC--TGGTGGACG----CGGAGCCT i mm10.chr7 C 0 I 1 s dasNov3.JH563638 305244 27 + 643850 atctaccta---atcagaat-cc----tggagcct i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5459339 1239 + 5549422 I e canFam3.chr1 4599284 432 - 122678785 I a score=730745.000000 s hg38.chr19_GL383574v1_alt 57296 69 + 155864 gaggattt-atattttaataagcttcttaaaggat--t---GTTTTATTTC---TTAAGATTCTGCTCTTCAACCAGC s panTro5.chr19 36125922 69 + 61309027 gaggattt-atattttaataagcttcttaaaggat--t---GTTTTATTTC---TTAAGATTCTGCTCTTCAACCAGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871869 69 + 64411610 GAGGATTT-ATATTTTAATAAGCTTCTTAAAGGAT--T---GTTTTATTTC---TTAAGATTCTGCTCTTCAACCAGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6289698 69 - 8369475 GAGGATTT-ATATTTTAATAAGCTTCTTAAAGGAT--T---GTTTTATTTC---TTAAGATTCTGCTCTTCAACCAGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63882339 55 - 106955855 gaggattt-gtattttagtaagcttctta-------------------TTC---TTAAAATTCTGCTCTTCAACCAGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30193477 69 + 53671032 gaggattt-gtattttaataagcttcttaaaggat--t---ATTTTATTTA---TTAAAATTCTGCTTTTCAGCCAGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34647215 69 + 59248254 gaggattt-gtattttaataagcttcttaaaggat--t---ATTTTATTTA---TTAAAATTCTGCTTTTCAGCCAGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513813 69 - 13342542 gaggattt-gtattttaataagcttcttaaaggat--t---ATTTTATTTA---TTAAAATTCTGCTTTTCAGCCAGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5444289 69 + 7714307 gaggattt-gtattttaataagcttcttaaaggat--t---ATTTTATTTA---TTAAAATTCTGCTTTTCAGCCAGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29251456 69 + 50890351 gaggattt-gtattttaataagcttcttaaaggat--t---ATTTTATTTA---TTAAAATTCTGCTTTTCAGCCAGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 875096 69 - 2385121 gagggttt-gtattttaataagcttcttaaaggat--t---ATTTTATTTA---TTAAAATTCTGCTTTTCAGCCAGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2311423 69 + 4274983 gaggattt-gtattttaataagcttcttaaaggat--t---GTTTTATTTA---TTAAAATTCTGCTTTTCAACCAGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28543020 69 + 49145316 gaggattt-gtattttAATAATCTTCTTAAAGGAT--T---GCTTCATTTC---TAAAAATTCTGTTTTACAGCCAGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5388390 69 + 8899380 gaggattt-gtattttAATAATCTTCTTAAAGGAT--T---GTTTCACTTC---TTAAAATTCTGTTTTACAACCAGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1597037 69 - 2680843 GAGGATTT-GTACTTTAATAATCTTCTTAAAGGAT--T---GTTTCATTTC---TTAAAATTCTGTTTTACAACCGGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348186 69 - 4471408 gaggattt-gcattttaataatcttcttacaggAT--T---GTTTCATTTC---TAAAAATTCTGTTTTACAACCAGC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 545906 69 + 2501019 agggatct-gcg-tttaataagcttcttaaaggatcct---gTTTCATTTT---TTAAAATTCTGTTTTCCA-CCAAC i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111076627 66 - 145441459 GACATTTTAACAGTTTAATAAG---CTTAAAGGAT--CTTATTTTCATTTT---GAAAAAGTCTCTCTTTCTA----C i mm10.chr7 I 1 C 0 s dasNov3.JH563638 305271 74 + 643850 gggtgtct-gcattttaatgaccttactaagagatcct---gcttcaTTTCTGTTTAAAGTTCTATTTCTCCACTAGC i dasNov3.JH563638 C 0 I 2564 e micMur3.chr22 3947282 530 - 30143674 I e otoGar3.GL873654 5459339 1239 + 5549422 I e canFam3.chr1 4599284 432 - 122678785 I a score=151028.000000 s hg38.chr19_GL383574v1_alt 57365 11 + 155864 CAGTCTCATAA s panTro5.chr19 36125991 11 + 61309027 CAGTCTCATAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871938 11 + 64411610 CAGTCTCATAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6289767 11 - 8369475 CAGTCTCATAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63882394 11 - 106955855 CAGTCTCATAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30193546 11 + 53671032 CAGTCTCATAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34647284 11 + 59248254 CAGTCTCATAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513882 11 - 13342542 CAGTCTCATAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5444358 11 + 7714307 CAGTCTCATAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29251525 11 + 50890351 CAGTCTCATAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 875165 11 - 2385121 CAGTCTCATAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2311492 11 + 4274983 CAGTCTCATAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28543089 11 + 49145316 CAGTCTCATAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5388459 11 + 8899380 CAGTCTCATAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1597106 11 - 2680843 CAGTCTCATAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348255 11 - 4471408 CAGTCTCATAA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 545975 11 + 2501019 CGGTCTCATAA i proCoq1.NW_012149263v1 C 0 I 19179 s mm10.chr7 111076693 11 - 145441459 CAGTCTCCTAG i mm10.chr7 C 0 C 0 e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5459339 1239 + 5549422 I e canFam3.chr1 4599284 432 - 122678785 I a score=137936.000000 s hg38.chr19_GL383574v1_alt 57376 12 + 155864 TTTTAAATGGTT s panTro5.chr19 36126002 12 + 61309027 TTTTAAATGGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871949 12 + 64411610 TTTTAAATGGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6289778 12 - 8369475 TTTTAAATGGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63882405 12 - 106955855 TTTTAAATGGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30193557 12 + 53671032 TTTTAAATGGTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34647295 12 + 59248254 TTTTAAATGGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513893 12 - 13342542 TTTTAAATGGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5444369 12 + 7714307 TTTTAAATGGTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29251536 12 + 50890351 TTTTAAATGGTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 875176 12 - 2385121 TTTTAAATGGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2311503 12 + 4274983 TTTTAAATGGTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28543100 12 + 49145316 TTTTAAATGGTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5388470 12 + 8899380 TTTTAAATGGCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1597117 12 - 2680843 TTTTAAATGGTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348266 12 - 4471408 TTTTAAATGGTT i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111076704 12 - 145441459 TCTTTAATCATT i mm10.chr7 C 0 I 2045 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5459339 1239 + 5549422 I e canFam3.chr1 4599284 432 - 122678785 I a score=1433720.000000 s hg38.chr19_GL383574v1_alt 57388 154 + 155864 A------TCCATACCTTTTATTCTTATCTTTGTTTCTTCCTTTTTTCTTAAtctttttctttcttttatttac----ttattagagatgaggtctccctgtattgcccaggctggtctcgaactcctgggctcaagcgatccatttgccttggcctccccaaag s panTro5.chr19 36126014 154 + 61309027 A------TCCATACCTTTTATTCTTATCTTTGTTTCTTCCTTTTTTCTTAAtctttttctttcttttatttac----ttattagagatgaggtctccctgtattgcccaggctggtctcgaactcctgggctcaagcgatccatttgccttggcctccccaaag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39871961 154 + 64411610 A------TCCATACCTTTTATTCTTATCTTTGTTTCTTCCTTTTTTCTTAATCTTTTTCTTTCttttatttac----ttattagagatgaggtctccctgtattgcccaggctggtctcgaactcctgggctcaagcgatccatttgccttggcctccccaaag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6289790 154 - 8369475 A------TCCATACcttttattcttatctttgtttcttccttttttcttAATCTTTTTCTTTCttttatttac----ttattagagatgaggtctccctgtattgcccaggctggtctcgaactcctgggctcaagcgatccatttgccttggactccccaaag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63882417 154 - 106955855 A------TCCATACCTTTTATTCTTATCTTTGTTTCTTTCTTTTTTCTTAATATTTTTATTTCttttatttac----ttattagagatgaggtttccctatattgcccaggctggtctcgaactcctgggctcaagcagtccatttgccttggcctccccaaag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30193569 154 + 53671032 A------TCCATACcttttattctttgttttctttctttcttttttcttAATCTTTTTCTTTCttttatttac----ttattagagttgaggtctccctatattgcccatgctggtctcaaactcctgggctcaagcgatccatttgccttggcctcctcatag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34647307 154 + 59248254 A------TCCATACcttttattctttgttttctttctttcttttttcttaatctttttctttcttttatttac----ttattagagttgaggtctccctatattgcccatgctggtctcaaactcctgggctcaagcgatccatttgccttggcctcctcatag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4513905 154 - 13342542 A------TCCATACcttttattctttgttttctttctttcttttttcttAAtctttttctttcttttatttac----ttattagagttgaggtctccctatattgcccatgctggtctcaaactcctgggctcaagcgatccatttgccttggcctcctcatag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5444381 154 + 7714307 A------TCCATACcttttattctttgttttctttctttcttttttcttAATCTTTTTCTTTCttttatttac----ttattagagttgaggtctccctgtattgcccatgctggtctcaaactcctgggctcaagcgatccatttgccttggcctcctcaaag i cerAty1.NW_012005268v1 C 0 I 44 s chlSab2.chr6 29251548 154 + 50890351 A------TCCATGCcttttattctttgttttctttctttcttttttcttaatctttttctttcAtttatttac----ttattagagttgaggtctccctatattgcccatgctggtctcaaactcctgggctcaagcgatccatttgccttggcctcctcaaag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 875188 154 - 2385121 A------TCCATACcttttattctttgttttctttctttcttttttcttaatctttttctttcttttatttac----ttattagagttgaggtctccctatattgcccatgctggtctcaaactcctgggctcaagcgatccatttgccttggcctcctcaaag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2311515 154 + 4274983 A------TCCATACcttttattctttgttttctttctttcttttttcttAATCTTTTTCTTTCttttatttac----ttattagagttgaggtctccctatattgcccaggctggtctcaaactcctgggctcaagcgatccatttgccttggcctcctcaaag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28543112 157 + 49145316 ACAAGATTCCATACCTTTTAATCTT-------TTTCTTTCTTTTTTCTTAACATTTTTCTTTCTTTTATTTACTTAtttattagagatgaggtctcactatattgcccaggcttgtctcgaactcctgggctcgtgagatccatctgccttggccttcccaaag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5388482 157 + 8899380 ACAAGATTCCATACCttttattctt-------tttctttcttttttcttaatctttttctttcttttAtttacttatttattagagatgaggtctcactttattgcccaggtttgtttcgaactcctgggctcatgagatccatctgcattggcctccccaaag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1597129 155 - 2680843 ACAAGATTCCATACcttttattctt-------tttctttcttttttcttaa--tctttctttctttTATTTACTTAtttattagagatgaggtctcactatattgcccaggcttgtctcgaactcctaggcttatgagatccatctgccttggcctccccaaag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348278 157 - 4471408 ACAAGATTCCAGACCTTttattctt-------tttctttcttttttcttaatctttttatttcttttatttacttAtttattagagatgaggtctcactatattgcccaggcttgtctcgaactcctgggctcatgagatccatctgccttggcctccccaaag i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5459339 1239 + 5549422 I e mm10.chr7 111076716 2045 - 145441459 I e canFam3.chr1 4599284 432 - 122678785 I a score=282562.000000 s hg38.chr19_GL383574v1_alt 57542 43 + 155864 tgttgggatgttgggattacaggcgtgagccattgggcctggc s panTro5.chr19 36126168 43 + 61309027 tgttgggatgttgggattacaggcgtgagccattgggcctggc i panTro5.chr19 C 0 I 3 s panPan2.chr19 39872115 43 + 64411610 tgttgggatgttgggattacaggcgtgagccattgggcctggc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6289944 43 - 8369475 tgttgggatgttgggattacaggcgtgagccattgggcctggc i gorGor5.CYUI01015150v1 C 0 I 2 s nomLeu3.chr10 63882571 35 - 106955855 --------tattgggattacaggcgtgagccattgggcccagc i nomLeu3.chr10 C 0 I 10 s rheMac8.chr19 30193723 35 + 53671032 --------tgttgggattacaggcataagctattgggcctggc i rheMac8.chr19 C 0 I 7 s macFas5.chr19 34647461 35 + 59248254 --------tgttgggattacaggcataagctattgggcctggc i macFas5.chr19 C 0 I 7 s macNem1.NW_012011689v1 4514059 35 - 13342542 --------tgttgggattacaggcataagctattgggcctggc i macNem1.NW_012011689v1 C 0 I 2 s chlSab2.chr6 29251702 35 + 50890351 --------tgttgggattacaagcataagctattgggcctggc i chlSab2.chr6 C 0 I 6 s manLeu1.NW_012102454v1 875342 35 - 2385121 --------tgttgggattacaggcataagctattgggcctggc i manLeu1.NW_012102454v1 C 0 I 20 s colAng1.NW_012111697v1 2311669 35 + 4274983 --------tgttgggattacaggcataagctattgggcctggc i colAng1.NW_012111697v1 C 0 I 6 s calJac3.chr22 28543269 35 + 49145316 --------tgctgggattacaggtatgagccattgctcccagc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5388639 35 + 8899380 --------tgctgggattacaggtgtgagccattgcacccagc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1597284 35 - 2680843 --------tgctgggattacaggtgtgagccattgtgcccagc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348435 35 - 4471408 --------tgctgggattacaggtgtgagccattgcacccagc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5459339 1239 + 5549422 I e mm10.chr7 111076716 2045 - 145441459 I e canFam3.chr1 4599284 432 - 122678785 I e cerAty1.NW_012005268v1 5444535 44 + 7714307 I a score=1007396.000000 s hg38.chr19_GL383574v1_alt 57585 110 + 155864 -----------------------tttttttttttttttaaagatagg-tctcactatgctgcccaaactgaaatgcagtggctatttacagatgtgatcatagtgcactgcagccttggacacctggccccaaa s panTro5.chr19 36126214 110 + 61309027 -----------------------tttttttttttttttaaagatagg-tctcactgtgctgcccaaactgaaatgcagtggctatttacagatgtgatcatagtgcactgcagccttggacacctggccccaaa i panTro5.chr19 I 3 C 0 s panPan2.chr19 39872158 108 + 64411610 -------------------------tttttttttttttaaagatagg-tctcactgtgctgcccaaactgaaatgcagtggctatttacagatgtgatcatagtgcactgcagccttggacacctggccccaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6289989 110 - 8369475 -----------------------tttttttttttttttaaagatagg-tctcactatgctgcccaaactgaaatgcagtggctatttacagatgtgatcatagtgcactgcagccttggacacctggccccaaa i gorGor5.CYUI01015150v1 I 2 C 0 s nomLeu3.chr10 63882616 110 - 106955855 -----------------------ttttttttttttttaagaggtggg-tctcactatgctgcccgaactgaaatgcagtggctattcacagatatgatcatagcgcactgcagccttggacacctggccccaaa i nomLeu3.chr10 I 10 C 0 s rheMac8.chr19 30193765 110 + 53671032 -----------------------ttttttttttttttaggagatggg-tctcactatgctgcccagactgaaatgcagtggctcttcacaggtgtgatcatagcacactgcagccttggacacctgtccccaaa i rheMac8.chr19 I 7 C 0 s macFas5.chr19 34647503 110 + 59248254 -----------------------ttttttttttttttaggagatggg-tctcactatgctgcccagactgaaatgcagtggctcttcacaggtgtgatcatagcacactgcagccttggacacctgtccccaaa i macFas5.chr19 I 7 C 0 s macNem1.NW_012011689v1 4514096 110 - 13342542 -----------------------ttttttttttttttaggagatggg-tctcactatgctgcccagactgaaatgcagtggctcttcacaggtgtgatcatagcacactgcagccttggacacctgtccccaaa i macNem1.NW_012011689v1 I 2 C 0 s cerAty1.NW_012005268v1 5444579 110 + 7714307 -----------------------ttttttttttttttaggagttggg-tctcactatgctgcccagactgaaatgcagtggctcttcacaggtgtgatcatagcatactgcagccttggacacctgtccccaaa i cerAty1.NW_012005268v1 I 44 C 0 s chlSab2.chr6 29251743 110 + 50890351 -----------------------ttttttttttttttaagagatggg-tctcactatgctgcccagactgaaatgcaggggctcttcacaggtgcgatcatagcacactgcatccttggacacctgtccccaaa i chlSab2.chr6 I 6 C 0 s manLeu1.NW_012102454v1 875397 110 - 2385121 -----------------------ttttttttttttttaggagatggg-tctcactgtgctgcccagactgaaatgcagtggctcttcacaggtgtgatcatagcacactgcagccttggacacctgtccccaaa i manLeu1.NW_012102454v1 I 20 C 0 s colAng1.NW_012111697v1 2311710 110 + 4274983 -----------------------tttttttttttttaaagagatggg-tctcactatgctgcccagactgaaatgcagtggctattcacaggtgtgatcatagcacacttcagccttggacacctgtccccaaa i colAng1.NW_012111697v1 I 6 C 0 s calJac3.chr22 28543304 126 + 49145316 cCTTCTCttcttcttc--------ttttttttttttcaagagatggggtctcactttgctgccgagactgaaattcagtggctattcacaggtgtgatcatagtgcactgcaaccttggacatctggcctcaaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5388674 134 + 8899380 cCTTCTCTTCTtcttcttcttcttttttttttttttaaagagataggatctcactatgctgcccagactgaaattcagtggctattcacaggtatgatcatagcacactgcagccttggacatctggcctcaaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1597319 130 - 2680843 cCTTCCCTTCttcttcttcttcttttttttttttt----gagatgggatctcactatgctgcccagactgaaattcagtggctattcacaagtgtgatcatagcgcactgcagccttggacatctggcctcaaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348470 132 - 4471408 cCTTCTCttcttcttcttcttcttttttttttttt--aagagttgggatctcattatgctgcccagactgaaattaagtggctattcacaggtgtgatcatggtgcactgcagccttggacatctggcctcaaa i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5459339 1239 + 5549422 I e mm10.chr7 111076716 2045 - 145441459 I e canFam3.chr1 4599284 432 - 122678785 I a score=1231515.000000 s hg38.chr19_GL383574v1_alt 57695 140 + 155864 caagcctccca-----------------------ctttagc---ttccccagtagctggggctacagcctt--gtgccaccatgctcggcTTTTCCTTATCTATTTTTATGCACTTTAGAAATGGGTATTTTTGGCTCATTGCTTTATATGAATGGTTTTT------------GTTTTGT s panTro5.chr19 36126324 140 + 61309027 caagcctccca-----------------------ccttagc---ttccccagtagctggggctacagcctt--gtgccaccatgctcggcTTTTCCTTATCTATTTTTATGCACTTTAGAAATGGGTATTTTTGGCTCATTGCTTTATATGAATGGTTTTT------------GTTTTGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39872266 140 + 64411610 caagcctccca-----------------------ccttagc---ttccccagtagctggggctacagcctt--gtgccaccatgctcggcTTTTCCTTATCTATTTTTATGCACTTTAGAAATGGGTATTTTTGGCTCATTGCTTTATATGAATGGTTTTT------------GTTTTGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6290099 140 - 8369475 caagcctccca-----------------------ccttagc---ttccccagtagctggggctacagcctt--gtgccaccatgctcggcTTTTCCTTATCTATTTTTATGCACTTTAGAAATGGGTATTTTTGGTTCATTGCTTTATATGAATGGTTTTT------------GTTTTGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63882726 135 - 106955855 caagcctccca-----------------------ccttagc---ttccccagtagctggggctacagcctt--gtgctaccatgctcggcTTTTCCTTATCTATTTTTATCCACTTTAGAAATGGGTATTTTTGGCTCATTGCTTTATATGAATGGT-----------------TTTTGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30193875 139 + 53671032 caagcctcccg-----------------------ccttagc---ttccccagtagctggatctacagcctt--gtgccaccatgctcgg------cttatctatttgtatCTACTTCTAATATGGGTATTTTTGGCTCATTGCTTTATGTGAATGGgtttt-------tttgtttgtttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34647613 149 + 59248254 caagcctcccg-----------------------ccttagc---ttccccagtagctggagctacagcctt--gtgccaccatgctcggcTTTTCCTTATCTATTTGTATCTACTTCTAATATGGGTATTTTTGGCTCATTGCTTTATGTGAATGGgttttt---ttgtttgtttgtttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4514206 141 - 13342542 caagcctcccg-----------------------ccttagc---ttccccagtagctggagctacagcctt--gtgccaccatgctcggcttttccttatctatttgtaTCTACTTCTAATATGGGTATTTTTGGCTCATTGCTTTATGTGAATGGgtttt-----------tttgtttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5444689 140 + 7714307 caagcctcccg-----------------------ccttagc---ttccccagtagctggagctacagcctt--gtgccaccatgctcggcttttccttatctatttgtaTCTACTTCTAATATGGGTATTTTTGGCTCATTGCTTTATGTGAATGGgtttt------------ttgtttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29251853 138 + 50890351 caagcctcccg-----------------------ccttagc---ttcccccgtagctggagctacagcttt--gtgccaccatgctcgacTTTTCCTTATCCATTTGTATCCACTTCTAATATGGATATTTTTGGCTCATTGCTTTATGTGAATGGGTTTTT--------------TTTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 875507 152 - 2385121 caagcctcccg-----------------------ccttagc---ttccccagtagctggagctacagcctt--gtgccaccgtgctcggcTTTTCCTTATCTATTTGTATCCACTTCTAATATGGGTATTTTTGGCTCATTGCTTTATGTGAATGGATTTtttgtttgtttgtttgtttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2311820 140 + 4274983 caagcctcccg-----------------------ccttagc---ttccccagtagctggagctacagcctt--gtgccaccatgcttggcTTTTCCTTATCTATTTGTATCCACTTCTGATATGGGTATTTTTGGCTCATTGCTTTATGTGAATGGgtttt------------gttttgt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28543430 133 + 49145316 caggcctcctg-----------------------ccttagt---ttctctagtagtttgggctatagactt--gtgccaccatgctcggcTTTTCCTTATCTATTTTTATCTACTGCTAATGTGAATATTTTTGGCTCATTGCTTTATATGAATGGTTCTT------------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5388808 133 + 8899380 caggcctcctg-----------------------ccttatc---ttctcttgtagcttggcctacagcctt--gtgccaccatgctccgcTTTTCCTTATCTATTTTTATCTACTGCTAATGTGAGTATTTTTGGCTCATTGCTTTATATGAATGGTTTTT------------------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1597449 133 - 2680843 caggcctcctg-----------------------ccttagc---ttctctagtagcttgggctacagcctt--gcgccaccatgcttggcTTTTCCTTATCTATTTTTATCTACTGCTAATGTGAATGTTTTTGGCTCATTGCTTTATATGAATGGTTTTT------------------- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348602 133 - 4471408 caggcctcctg-----------------------ccttagc---ttctctagtagcttgggctacagcctt--gtgccaccatgctcggcttttctttatctatttttATCTACTGCTAATGTGGGTATTTTTGGCTCATTGCTTTATATGAATGGTTTTT------------------- i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4599716 148 - 122678785 taagccacccaggtgtcccTGTTTAATTTTTTTTTTTTAACTATTTTTCTACCAGCCAGTTTTGTAGTCTTTGGTGGTCCCAAGAT-------TCTGTATCTGTTTTTACCTACAGCTGAAGTGGTTGTTATTGGCTCATTGCCTTATATGGATG------------------------- i canFam3.chr1 I 432 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5459339 1239 + 5549422 I e mm10.chr7 111076716 2045 - 145441459 I a score=34441.000000 s hg38.chr19_GL383574v1_alt 57835 4 + 155864 TTTG s panTro5.chr19 36126464 4 + 61309027 TTTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39872406 4 + 64411610 TTTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6290239 4 - 8369475 TTTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63882861 4 - 106955855 TTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30194014 4 + 53671032 tttg i rheMac8.chr19 C 0 I 1 s macFas5.chr19 34647762 4 + 59248254 tttg i macFas5.chr19 C 0 I 1 s macNem1.NW_012011689v1 4514347 4 - 13342542 tttg i macNem1.NW_012011689v1 C 0 I 1 s cerAty1.NW_012005268v1 5444829 4 + 7714307 tttg i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29251991 4 + 50890351 TTTG i chlSab2.chr6 C 0 I 1 s manLeu1.NW_012102454v1 875659 4 - 2385121 tttg i manLeu1.NW_012102454v1 C 0 I 1 s colAng1.NW_012111697v1 2311960 4 + 4274983 tttg i colAng1.NW_012111697v1 C 0 I 303 s calJac3.chr22 28543563 2 + 49145316 --TG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5388941 2 + 8899380 --TG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1597582 2 - 2680843 --TG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348735 2 - 4471408 --TG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5460578 4 + 5549422 TTTC i otoGar3.GL873654 I 1239 C 0 s canFam3.chr1 4599864 4 - 122678785 TTCA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e mm10.chr7 111076716 2045 - 145441459 I a score=44749.000000 s hg38.chr19_GL383574v1_alt 57839 5 + 155864 TTTTT s panTro5.chr19 36126468 5 + 61309027 TTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39872410 5 + 64411610 TTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6290243 5 - 8369475 TTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63882865 5 - 106955855 TTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30194019 5 + 53671032 ttgtt i rheMac8.chr19 I 1 C 0 s macFas5.chr19 34647767 5 + 59248254 ttgtt i macFas5.chr19 I 1 C 0 s macNem1.NW_012011689v1 4514352 5 - 13342542 ttgtt i macNem1.NW_012011689v1 I 1 C 0 s cerAty1.NW_012005268v1 5444834 5 + 7714307 ttgtt i cerAty1.NW_012005268v1 I 1 C 0 s chlSab2.chr6 29251996 5 + 50890351 TTGTT i chlSab2.chr6 I 1 C 0 s manLeu1.NW_012102454v1 875664 5 - 2385121 ttgtt i manLeu1.NW_012102454v1 I 1 C 0 s colAng1.NW_012111697v1 2312267 5 + 4274983 TTTTT i colAng1.NW_012111697v1 I 303 C 0 s calJac3.chr22 28543565 4 + 49145316 -TTTT i calJac3.chr22 C 0 I 2451 s saiBol1.JH378197 5388943 4 + 8899380 -TTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1597584 4 - 2680843 -TTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348737 4 - 4471408 -TTTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5460582 5 + 5549422 CTTTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4599868 5 - 122678785 CTTTT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e mm10.chr7 111076716 2045 - 145441459 I a score=1457458.000000 s hg38.chr19_GL383574v1_alt 57844 137 + 155864 AAGTAAAACAATGTTGAGTCATTTCAGAAAGAC-CTATAGTCACAAGACAGTATTTTAAAAAGCTATTAAGGGTAAA---AAT----TCAATGCTAAAC---ATAATCTTATGTATTTCACTTAAGATATTTTGAAATAGTTCTTACT s panTro5.chr19 36126473 137 + 61309027 AAGTAAAACAATGTTAAGTCATTTCAGAAAGAC-CTATAGTCACAAGACAGTATTTTAAAAAGCTATTAAGGGTAAA---AAT----TCAATGCTAAAC---ATAATCTTATGTATTTCACTTAAGATATTTTGAAATAGTTCTTACT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39872415 137 + 64411610 AAGTAAAACAATGTTAAGTCATTTCAGAAAGAC-CTATAGTCACAAGACAGTATTTTAAAAAGCTATTAAGGGTAAA---AAT----TCAATGCTAAAC---ATAATCTTATGTATTTCACTTAAGATATTTTGAAATAGTTCTTACT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6290248 137 - 8369475 AAGTAAAACAATGTTAAGTCATTTCAGAAAGAC-CTATAGTCACAAGACAGTATTTTAAAAAGCTATTAAGGGTAAA---AAT----TCAATGCTAAAC---ATAATCTTATGTATTTCACTTAAGATACTTTGAAATAGTTCTTACT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63882870 137 - 106955855 AAGTAAAGCAATGTTAAGTCATTTCAGAAAGAC-CTCTAATCACAAGACAGTATTTTAAAAAGCTATTAAGGGTAAA---AAT----TCAATGCTAAAC---ATAATCTTATGTATTTCAGTTAAGATATTTTGAAATAGTTCTTACT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30194024 135 + 53671032 tAGTAAAGCAATGTTAAGTCATTTCAGAAAGAC-TTATAATCAC--AACAGTGTTTTAAAAAGCTATTAAGGTTGAA---AAT----TCAATGCTAAAC---ATAATCTTATGTATTTCACTTAAGATATTTTGAAATAGTTCTTACT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34647772 135 + 59248254 tAGTAAAGCAATGTTAAGTCATTTCAGAAAGAC-TTATAATCAC--AACAGTGTTTTAAAAAGCTCTTAAGGTTGAA---AAT----TCAATGCTAAAC---ATAATCTTATGTATTTCACTTAAGATATTTTGAAATAGTTCTTACT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4514357 135 - 13342542 tAGTAAAGCAATGTTAAGTCATTTCAGAAAGAC-TTATAATCAC--AACAGTGTTTTAAAAAGCTATTAAGGTTGAA---AAT----TCAATGCTAAAC---ATAATCTTATGTATTTCACTTAAGATATTTTGAAGTAGTTCTTACT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5444839 135 + 7714307 tAGTAAAGCAATGTTAAGTCATTTCAGAAAGAC-TTATAATCAC--AACAGTGTTTTAAAAAGCTATTAAGATTGAA---AAT----TCAATGCTAAAC---ATAATCTTATGTATTTCACTTAAGATATTTTGAAATAGTTCTTACT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29252001 137 + 50890351 TAGTAAAGCAATGTTAAGTCATTTCAGAAAGAC-TTATAATCACAAAACAGTGTTTTAAAAAGCTATTAAGGGTGCA---AAT----TCAATGCTAAAC---ATAATCTTATGTATTTCACTTAAGATATTTTGAAATAGTTCTTACT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 875669 137 - 2385121 tAGTAAACCAATGTTAAGTCATTTCAGAAAGAC-TTATAATCACAAAACAGTGTTTTAAAAAGCTATTAAGGTTGAA---AAT----TCAATGCTAAAC---ATAATCTTATGTATTTCACTTAAGATATTTTGAAATAGTTCTTACT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2312272 136 + 4274983 TAGTAAAGCAATGTTAAGTCATTTCAGAAAGAC-TTA-AATCACAAAACAGTATTTTAAAAAGCTATTAAGGGTGAA---AAT----TCAATGCTAAAC---ATAATCTTATGTATTTCACTTAAGATATTTTGAAATAGTTCTTACT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28546020 135 + 49145316 AAGTAAAGCAATGTTAAGTCGTTTCAGAAAGAT-CTATAGTCACAAGATAATATTTTAAAAAGTCATTAAGAGTAAA---AAT----TCAATGCTAAAC---AGAATCACA--TATTTCACTTAAGATGTTTTGAATTAGTTCATACA i calJac3.chr22 I 2451 C 0 s saiBol1.JH378197 5388947 137 + 8899380 AAGTAAAGCAATGTTAAGTCATTTCAGAAAGAT-CTATAGTCACAAGATAATATTTTAAAAACCTATTAAGAGTAAA---AAT----TCAATGCTAAAC---ACAATCATATGTATTTCACTTAAGATGTTTTGAAATAGTTCATATG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1597588 137 - 2680843 AAGTAAAGCAATGTTAAGTCATTTCAGAAAGAT-CTGTAGTCACAAGATAATATTTTAAAAAGCTATTAAGAGTAAA---AAT----TCAATGTTAAAC---ATAATCATATGTATTTCACTTAAGATGCTTTGAAATAGTTCATACG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348741 133 - 4471408 AAGTAAAGCAATGTTAAGTCATTTCAGAAAGAT-CTATAGTCACAAGATAATATTTTTAAAAACTATTAAGAGTAAA---AAT----TCAATGCTAAAC---GTAATCATATGTATTTCACTTAAGATGTTTTGAAA----TCATACA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5460587 143 + 5549422 AGAAAAAGTAACA--AAGTCATTACAAAAAGATGCTGTAAGCCCAGGGCAATATTTTAAAAAACTGTTGAGGGTAGA---AATCAAGCCAGTGCTAAACATGATAATCCTATAAAGTTTTCTTAAAATATTTTGAAATAGCCCCTGTT i otoGar3.GL873654 C 0 I 3250 s canFam3.chr1 4599873 129 - 122678785 AAATAAAACAATATAAAATCATTTCAGAAGGATGCTATAATTACAGGACAATATTGTTTAAAGCTCTTGAGAGTAAAATCAAG----CTAATGCTAAAC---ATAATCCTATGCATTTCACTTTAGATATTT------------TACT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e mm10.chr7 111076716 2045 - 145441459 I a score=295271.000000 s hg38.chr19_GL383574v1_alt 57981 29 + 155864 GTTACTCATATTGAT------TAGCTTAAtttt----------tt s panTro5.chr19 36126610 29 + 61309027 GTTACTCATATTGAT------TAGCTTAAtttt----------tt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39872552 28 + 64411610 GTTACTCATATTGAT------TAGCTTAA-ttt----------tt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6290385 29 - 8369475 GTTACTCATATTGAT------TAGCTTAAtttt----------tt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63883007 29 - 106955855 GTTACTCATATTGAT------TAGCTTAAtttt----------tt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30194159 29 + 53671032 GTTACTCATATTGAT------TAGCTTAAtttt----------tt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34647907 29 + 59248254 GTTACTCATATTGAT------TAGCTTAAtttt----------tt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4514492 29 - 13342542 GTTACTCATATTGAT------TAGCTTAAtttt----------tt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5444974 29 + 7714307 GTTACTCGTATTGAT------TAGCTTAAtttt----------tt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29252138 27 + 50890351 GTTACTC--ATTGAT------TAGCTTAAtttt----------tt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 875806 29 - 2385121 GTTACTCATATTGAT------TAGCTTAAtttt----------tt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2312408 29 + 4274983 GTTACTCATATTGAT------TAGCTTAAtttt----------tt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28546155 39 + 49145316 GCTACTCATGTTGAT------TAGCTTAttttttttttctttctt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5389084 29 + 8899380 GTTACTCATATTGAT------TGGCTTAATGtt----------tt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1597725 29 - 2680843 GTTGCTCATATTGAT------TAGCTTAAtttt----------tt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348874 33 - 4471408 GTTACTCATATTGAT------TAGCTTAAtttt------tttctt i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4600002 35 - 122678785 GTCATTCatattaattttatataacttaatttt----------tt i canFam3.chr1 C 0 I 1108 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5460730 3250 + 5549422 I e mm10.chr7 111076716 2045 - 145441459 I a score=107622.000000 s hg38.chr19_GL383574v1_alt 58010 18 + 155864 tctt---tttttttttctttt- s panTro5.chr19 36126639 19 + 61309027 tctt--ctttttttttctttt- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39872580 18 + 64411610 tctt---tttttttttctttt- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6290414 20 - 8369475 tctt-tttttttttttctttt- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63883036 21 - 106955855 tcttttttttttttttctttt- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30194188 17 + 53671032 tctt----ttttctttctttt- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34647936 17 + 59248254 tctt----ttttctttctttt- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4514521 17 - 13342542 tctt----ttttctttctttt- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5445003 17 + 7714307 tctt----ttttctttctttt- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29252165 17 + 50890351 tctt----ttttctttctttt- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 875835 17 - 2385121 tctt----ttttctttctttt- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2312437 17 + 4274983 tctt----ttttctttctttt- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28546194 18 + 49145316 tctt----tctttttctttttt i calJac3.chr22 C 0 I 11 s saiBol1.JH378197 5389113 18 + 8899380 tctt----tctttttcttttct i saiBol1.JH378197 C 0 M 873 s cebCap1.NW_016107633v1 1597754 14 - 2680843 tctt----tctttttttt---- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348907 18 - 4471408 tctt----tctttttttttttt i aotNan1.NW_018505377v1 C 0 I 1 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5460730 3250 + 5549422 I e mm10.chr7 111076716 2045 - 145441459 I e canFam3.chr1 4600037 1108 - 122678785 I a score=1504684.000000 s hg38.chr19_GL383574v1_alt 58028 165 + 155864 aagatggagtcttgctctgtcacccagactggagtgcagtggcacaatctcggctcactgcaacctccacctcccaggttcaagcg-attctcctgcctcaccctcccaaatagctgggattacaggcacgtgccaccacgcccagctcatttttttgtatttttg s panTro5.chr19 36126658 165 + 61309027 aagatggagtcttgctctgtcacccagactggagtgcagtggcacaatctcagctcactgcaacctccacctccgaggttcaagtg-attctcctgcctcaccctcccaagtagctgggattacaggcacgtgccaccacgcccagctcatttttttgtatttttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39872598 164 + 64411610 aagatggagtcttgctctgtcacccagactggagtgcagtggcacaatctcagctcactgcaacctccacctccgaggttcaagcg-attctcctgcctcaccctcccaagtagctgggattacaggcacgtgccaccacgcccagctca-ttttttgtatttttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6290434 165 - 8369475 aagatggagtcttgctctgtcacccagactggagtgcagtggcacaatctcggctcactgcaacctccacctcccaggttcaagcg-attctcctgcctcaccctcccaagtagctgggattacaggcacgtgccaccacgcccagctcatttttttgtatttttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63883057 165 - 106955855 aaaatggagtcttgctctgtcacccagactggagtgcagtggcacaatctcggctcactgcaacctccatctcccaggttcaagcg-attctcctgcctcaccctcccaagtagctgggattacaggcatgtgccaccatgcccagctcatttttttgtatttttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30194205 164 + 53671032 aagatggagtcttgctctgtcacccagactagagtgcagtggcacaatctcggctcactgcaacctccacctcccaggttcaagcg-attctcctgcctcaccctcccaagtagctgggattacaggcacgtgccaccacgcccagctca-ttttttgtatttttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34647953 164 + 59248254 aagatggagtcttgctctgtcacccagactggagtgcagtggcacaatctcggctcactgcaacctccacctcccaggttcaagcg-attctcctgcctcaccctcccaagtagctgggattacaggcacgtgccaccacgcccagctca-ttttttgtatttttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4514538 164 - 13342542 aagatggagtcttgctctgtcacccagactggagtgcagtggcacaatctcagctcactgcaacctccacctcccaggttcaagcg-attctcctgcctcaccctcccaagtagctgggattacaggcacgtgccaccacgcccagctca-ttttttgtatttttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5445020 164 + 7714307 aagatggagtcttgctctgtcacccagactggagtgcagtggcacaatctcggctcactgcaacctccacctcccaggttcaagcg-attctcctgcctcaccctcccaagtagctgggattacaggcacgtgccaccatgcccagctca-ttttttgtatttttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29252182 164 + 50890351 aagatggagtcttgctctgtcacccagactggagtgcagtggcacaatctcggctcactgcaacctccacctcccaggttcaagcg-attctcctgcctcaccctcccaagtaactgggattacaggcacgtgccaccacgcccagctca-ttttttgtatttttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 875852 164 - 2385121 aagatggagtcttgctctgtcacccagactggagtgcagtggcacaatctcggctcactgcaacctccacctcccaggttcaagcg-attctcctgcctcaccctcccaagtagctgggattacaggcacgtgccaccatgcccagctca-ttttttgtatttttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2312454 164 + 4274983 aagatggagtcttgctctgtcacccagactggagtgcagtggcacaatcttggctcactgcaacctccacctcccaggttcaagcg-attctcctgcctcaccctcccaagtagctgggattacaggcacgtgccactacgcccagctca-ttttttgtatttttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28546223 164 + 49145316 aagatggaatcttgctctgtcacccaggctggagtgcagtggcacagtctcggctcactgcagcctccacctcctgggtgcaagtg-attctcctgtctcagcctcctgagtagctgggatgacaggtgcgtgccaccacgcccagctaa-ttttttgtacttttg i calJac3.chr22 I 11 C 0 s cebCap1.NW_016107633v1 1597768 165 - 2680843 aagatggaatcttgctctgtcacctaggctggagtgcagtggcacaatctcagctcactgcagcctccaccacccaggtgcaagtgaattctcctgcctcagcctcctgagtagctggaattacaggtgtgtgccaccacgcccagctaa-ttttttgtacttttg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 348926 164 - 4471408 aagatggaatcatgctctgtcgcccaggctggagtgcagtggcataatctcggctcactgcagcctccacctcccgggtgcaagtg-attctcctgcctcagcctcctgagtagctgggattacaggtgcgtgccaccacgcccagctaa-ttttttgtacttttg i aotNan1.NW_018505377v1 I 1 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5460730 3250 + 5549422 I e mm10.chr7 111076716 2045 - 145441459 I e canFam3.chr1 4600037 1108 - 122678785 I e saiBol1.JH378197 5389131 873 + 8899380 M a score=3736465.000000 s hg38.chr19_GL383574v1_alt 58193 400 + 155864 gtagagatgtggtttcgtgatgttggccaggctggtctcaaactcctgacctcaagtgatccacctgccttggcctcccaaagtgctgggattgtagatgtgagccactgcgtccagccTACTTGCTTAATTTTTAAACATTCTAAAGATTGtttgtttgttttttgagatagggtcctgctctgtctcccagactggaatgcagtggtgtgatcatggctcactgcagcctctacctcctgagctcaggccatcctc-------------------ccaattagctgagatcacaagcaagcaccaccagctagttt---------tgtagggacggggtttcgccatgttgccaaggctggtctggaactcctgggctcaagtgatccac-----ccac----------------------cttggcctccc-aaagtgctgggattatagg-ca- s panTro5.chr19 36126823 400 + 61309027 gtagagatgtggtttcctgatgttggccaggctggtctcaaactcctgacctcaagtgatccacctgccttggcctccgaaagtgctgggattgtagatgtgagccactgcgtccagccTACTTGCTTAATTTTTAAACATTCTAAAGATTGtttgtttgttttttgagatagggtcctgctctgtctcccagactggaatgcagtggtgtgatcatggctcactgcagcctctacctcctgagctcaggccatcctc-------------------ccaattagctgagatcacaagcaagcaccaccagctagttt---------tgtagggatggggtttcgccatgttgccaaggttggtctggaactcctgggctcaagtgatccac-----ccac----------------------cttggcctccc-aaagtgctgggattatagg-ca- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39872762 400 + 64411610 gtagagatgtggtttcctgatgttggccaggctggtctcaaactcctgacctcaagtgatccacctgccttggcctccgaaagtgctgggattgtagatgtgagccactgcgtccagccTACTTGCTTAATTTTTAAACATTCTAAAGATTGtttgtttgttttttgagatagggtcctgctctgtctcccagactggaatgcagtggtgtgatcatggctcactgcagcctctacctcctgagctcaggccatcctc-------------------ccaattagctgagatcacaagcaagcaccaccagctagttt---------tgtagggacggggtttcgccatgttgccaaggctggtctggaactcctgggctcaagtgatccac-----ccac----------------------cttggcctccc-aaagtgctgggattatagg-ca- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6290599 400 - 8369475 gtagagatgtggtttcgtgatgttggccaggctggtctgaaactcctgacctcaagtgatccacctgccttggcctcccaaagtgctgggattgtagatgtgagccactgcgtccagccTACTTGCTTAATTTTTAAACATTCTAAAGATTGtttgtttgttttttgagatagggtcctgctctgtctcccagactggaatgcagtggtgtgatcatggctcactgcagcctctacctcctgagctcaggccatcctc-------------------ccaattagctgagatcacaagcaagcaccaccagctagttt---------tgtagggacggggtttcgccatgttgccaaggctggtctggaactcctgggctcaagtgatccac-----ccac----------------------cttggcctccc-aaagtgctgggattatagg-ca- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63883222 395 - 106955855 atagagatgtggttttgcgatgttggccaggctggtctcaaactcctgacctcaagtgatccacctgccttggcctcccaaagtgctgagattgtagacatgagccactgcgcccagccTACTTTCTTAATTTTTAAACATTCTAAAGATTGtttg-----tttttgagatagggtcctgctctgtctcccagactggaatgtagtggtgtgatcatggcttactgcagcctccacctcctgagctcaggccatcctc-------------------ccaattagctgagatcacaagcaagcaccaccagctagttt---------tgtaggaacagggtttcgccatgttgccaaggctggtctggaactcctgggctcaagcaatccac-----ccac----------------------ctcggcctccc-aaagtgctgggattatagg-ca- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30194369 415 + 53671032 gtagagatgtggtttcgccatgttggtcaggctggtctcaaattcctgacctcaagtgatccaccccccttggcctcccaaagtgctgagattataggcgtgagccactacgcccagccTACTTGCTTAATTTTTAAGCATTCTAAAGATTGtttg-----ttcttgggatagggtcctgctctgtctcccagactggaatgtggtggtgtgatcatggctcactgcagcctccccctcctgagctcaggccatcctcctaagctcaggccatcctcccaattagctgagatcacaagcaagcaccaccagctagttt---------tgtagggatggagtttcgccatgttgccaaggctggtctggaactcctgggctcaagtgatccac-----ccac----------------------ctcagcctcccaaaagtgctgggattatagg-ca- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34648117 415 + 59248254 gtagagatgtggtttcgccatgttggtcaggctggtctcaaattcctgacctcaagtgatccaccccccttggcctcccaaagtgctgagattataggcgtgagccactacgcccagccTACTTGCTTAATTTTTAAGCATTCTAAAGATTGtttg-----ttcttgggatagggtcctgctctgtctcccagactggaatgtggtggtgtgatcatggctcactgcagcctccccctcctgagctcaggccatcctcctaagttcaggccatcctcccaattagctgagatcacatgcaagcaccaccagctagttt---------tgtagggatggagtttcgccatgttgccaaggctggtctggaactcctgggctcaagtgatccac-----ccac----------------------ctcagcctcccaaaagtgctgggattatagg-ca- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4514702 415 - 13342542 gtagagatgtggtttcgccatgttggtcaggctggtctcaaattcctgacctcaagtgatccaccccccttggcctcccaaagtgctgagattataggcgtgagccactacgcccagccTACTTGCTTAATTTTTAAGCATTCTAAAGAttgtttg-----ttcttgggatagggtcctgctctgtctcccagaccggaatgtggtggtgtgatcatggctcactgcagcctccccctcctgagctcaggccatcctcctaagctcagaccatcctaccaattagctgagatcacaagcaagcaccaccagctagttt---------tgtagggatggagtttcgccatgttgccaaggctggtctggaactcctgggctcaagtgatccac-----ccac----------------------ctcagcctcccaaaagtgctgggattatagg-ca- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5445184 396 + 7714307 gtagagatgtggtttcgccatgttggtcaggctggtctcaaattcctgacctcaagtgatccaccccccttggcctcccaaagtgctgagattataggcgtgagccactacgcccagccTACTTGCTTAATTTTTAAGCATTCTAAAGAttgtttg-----ttcttgggatagggtcctgctctgtctcccagactggaatgtggtggtgtgatcatggctcactgcagcctccccctcctgagctcaggccatcctc-------------------ccaattagctgagatcacaagcaagcaccaccagctagttt---------tgtagggatggagtttcgccatgttgccaaggctggtctggaactcctgggctcaagtgatccac-----ccac----------------------ctcagcctcccaaaagtggtgggattatagg-ca- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29252346 395 + 50890351 gtagagatgtggtttcgccatgttggtcaggctggtctcaaattcctgacctcaagtgatccaccccccttggcctcccaaagtgctgggattataggcgtgagccactacacccagccTACTTGCTTAATTTTTAAGCATTCTAAAGATTGtttg-----ttcttgggatagggtcctgctctgtctcccagactggaatgcggtggtgtgatcatgactcactgcagcctccc-------------------cctcctgagctcaggccatcctcccaattatctgagatcacaagcaagcaccaccagctagttt---------tgtagggatggagtttcgccatgttgccaaggctgatctggaactcctgggctcaagtgatccac-----ccac----------------------ctcagcctccc-aaagtgctgggattatagg-ca- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 876016 415 - 2385121 gtagagatgtggtttcgccatgttggtcaggctggtctcaaattcctgacctcaagtgatccaccccccttggcctcccaaagtgctgagattataggcgtgagccactacgcccagccTTCTTGCTTAATTTTTAAGCATTCTAAAGATTGtttg-----ttcttgggatagggtcctgctctgtctcccagactggaatgtggtggtgtgatcatggctcactgcagcctccccctcctgagctcaggccatcctcctgagctcaggccatcctcccaattagctgagatcacaagcaagcaccaccagctagttt---------tgtagggatggagttttgccatgttgccaaggctggtctggaactcctgggctcaagtgatccac-----ccac----------------------ctcagcctcccaaaagtgctgggattatagg-ca- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2312618 410 + 4274983 gtagagatgtggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatcca-cccccttggcctcccaaagtgctgggattataggtgtgagccactacgcccagccTACTTGCTTAATTTTTAAGCATTCTAAAGA----TTG-----TTCTTCGgatagggtcctgctctgtctcccagactggaatgcggtggtgtgatcatggctcactgcagcctccacctcctgagctcagtccatcctcctgagctcaggccatcctcccaattagctgagatcacaagcaagcaccaccaggtagttt---------tgtagggatggggtttcaccatgttgccaaggctggtctggaactcctgggctcaagcgatccac-----ccac----------------------ctcagcctccc-aaagtgctgggattataggcca- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28546387 416 + 49145316 atagagatggggtttcgccatattggccaggctggtctcaaactcctgaccacaagtgagccacccaccttggccacccaaagtgctgggattacaggtgtgagccaccacagccagccTATTTGCTTAATTTTTAAACATTCCAAAGA----ttg-----tttttgagatatggtcctgctctctctcccggactggaatgcaatggtgtgatcatggctcactgcagcctccacctcctgggctcaagccatcctc-------------------ccaattaacttagatcacaggcaagcaccaccagctagtttttgtagttctgtagtgacatggtttcacgatgttgccaaggctagtctggaactcctgggctcaagcaatccac-----ctcctgcgg-------tgccctgccccctggcctccc-aaagtgctgggattgtgag-cat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5390022 421 + 8899380 gtagagatgggttttcatcatgttgaccaggatggtctcgatctcttgacctc--gtgatccacccgcctcggcctcccaaagtgctgggattataagcgtgagccaccgcgccca--------gcTCAATTTTTAAACATTCTAAAGATTGtttg-----tttttgagataggatcttgttctctctcccagactggaatgcagtggtgtgatcatggctcactgcagcctccacctcctgggctcaagccatcctc-------------------ccaattaacttagatcacaggcaagcaccaccagctagtttttgtagttctgtagggacagggtttcgccatgttgccaaagctggtctggaactcctgggctcaagcaatgcgcccccgctcccccgaccccagccccccagcctcctggcctccc-aaagtgctgggattgtggg-ta- i saiBol1.JH378197 M 873 C 0 s cebCap1.NW_016107633v1 1597933 426 - 2680843 gtagagatggggtttcaccatgttggccaggctagtctcaaactcctgacctcaagtgatccacccgccttggcctcccaaagtactgggattacaggtgtgagccaccacagccagccTATTTGCTTAATTTTTAGACATTCTAAAGATTGtttg-----tttttgagatgggatcttgctctctctcccagactggaatgcagtggtgtgatcatggcttattgcagcctccacctcctgggctcaagccatcctc-------------------ccagttaacttagatcacaagcaagcaccaccaggtagcttttgtagttctgtagggacagggtttcaccatgttgccgaggctagtctggaactcctgggctcaagcagtccac-----cccctgtgctgccccctgccccgccccctagcctccc-gaagtgctgggattgtggg-ca- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 349090 424 - 4471408 gtagagatggggtttcgccatgttggccaggctggtctcaaactcctgacctcaagtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagccaccacagccagccTATTTGCTTAATTTTTAAACATTCTGAAGATTGtttg-----tttttgagatagggtcttgctctctctcccagactggaatgcagtggtgtgatcatggctccctgcagcctccacctcctgggctcaagccatcctc-------------------ccaattaacttagatcacaggcaagcaccaccagctagtttttgtagttctgtagggacagggttttaccatgttgccaaggctggtctggaactcctgggctcaagcaatccac-----cctctgcaa--ccaccccccgcaacccccggcctccc-aaagtgctggggttgtggg-ca- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5460730 3250 + 5549422 I e mm10.chr7 111076716 2045 - 145441459 I e canFam3.chr1 4600037 1108 - 122678785 I a score=1879009.000000 s hg38.chr19_GL383574v1_alt 58593 187 + 155864 tgagccacagtgcccggccTA-TTCTGGAATTTTTAGTTAAATCAGGAACACATGAA----AAAGA----AGCATAAATATTGAAATTAGCATTATTC---------------------------ATGAAGAAT-------GAGAACTAA---TAAGGAACTTAAATTAGGCACAGGCAAAATGTAAA-TTAAATATACAAAAGTCAATAGTTCTggccgggcacgatggctca s panTro5.chr19 36127223 187 + 61309027 tgagccacagtgcccggccTA-TTCTGGAATTTTTAGTTAAATCAGGAACACATGAA----AAAGA----AGCATAAATATTGAAATTAGCATTATTC---------------------------ATGAAGAAT-------GAGAACTAA---TAAGGAACTTAAATTAGGCACAGGCAAAATGTAAA-TTAAATATACAAAAGTCAATAGTTCTggccaggcacgatggctca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873162 187 + 64411610 tgagccacagtgcccggccTA-TTCTGGAATTTTTAGTTAAATCAGGAACACATGAA----AAAGA----AGCATAAATATTGAAATTAGCATTATTC---------------------------ATGAAGAAT-------GAGAACTAA---TAAGGAACTTAAATTAGGCACAGGCAAAATGTAAA-TTAAATATACAAAAGTCAATAGTTCTggccaggcacgatggctca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6290999 187 - 8369475 tgagccacagtgcccggccTA-TTCTGGAATTTTTAGTTAAATCAGGAACACATGAA----AAAGA----AGCATAAATATTGAAATTAGCATTATTC---------------------------ATGAAGAAT-------GAGAACTAA---TAAGGAACTTAAATTAGGCACAGGCAAAATGTAAA-TTAAATATACAAAAGTCAATAGTTCTggccgggcacgatgactca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63883617 187 - 106955855 tgagccacagtgcccggccTA-TTCTGGAATTTTTACTTAAATCACGAACACATGAA----AAAGA----AGCATACCTATTGAAATTACCATTATTC---------------------------ATGAAGAAT-------GAGAACTAA---TACCGAACTTAAATTAGGCAGAGGCAAAATGTAAA-TTAAATATACAAAAGTCAATAGTTCTggctgggcacggtggctca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30194784 191 + 53671032 tgagccacagtgcccagccTA-TTCTGGAATTTTTAGTTAAATCAGGAACACATGAA----AAAGAAG-AAGCATAAATATTGAAATTAGTGTTATTC---------------------------ATGAAGAAT-------GAGAACTAA--TTAAGGAACTTAAATTAGGCAGAGGCAAAATGTAAA-TTAAATATACAAAAGTCAGTAGTTCTggccaggcacagtggctca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34648532 191 + 59248254 tgagccacagtgcccagccTA-TTCTGGAATTTTTAGTTAAATCAGGAACACATGAA----AAAGAAG-AAGCATAAATATTGAAATTAGTGTTATTC---------------------------ATGAAGAAT-------GAGAACTAA--TTAAGGAACTTAAATTAGGCAGAGGCAAAATGTAAA-TTAAATATACAAAAGTCAGTAGTTCTggccaggcacagtggctca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4515117 191 - 13342542 tgagccacagtgcccagccTA-TTCTGGAATTTTTAGTTAAATCAGGAACACATGAA----AAAGAAG-AAGCATAAATATTGAAATTAGTGTTATTC---------------------------ATGAAGAAT-------GAGAACTAA--TTGAGGAACTTAAATTAGGCAGAGGCAAAATGTAAA-TTAAATATACAAAAGTCAGTAGTTCTggccaggcacagtggctca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5445580 191 + 7714307 tgagccacagtgcccagccTA-TTCTGGAATTTTTAGTTAAATCAGGAACACATGAA----AAAGAAG-AAGCATAAATATTGAAATTAGTGTTATTC---------------------------ATGAAGAAT-------GAGAACTAA--TTAAGGAACTTAAATTAGGCAGAGGCAAAATGTAAA-TTAAATATACAAAAGTCAGTAGTTCTggctgggcacagtgactca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29252741 190 + 50890351 tgagccacagtgcccagccTA-TTCTGGAATTTTTAGTTAAATCAGGAACACATGAA----AAAGAAG-CAGCATAAATATTGAAATTAGTGTTATTC---------------------------ATGAAGAAT-------GAGAACTAA---TAAGGAACTTAAATTAGGCAGAGGCAAAATGTAAA-TTAAATATACAAAAGTCAGTAGTTCTggccaggcacagtggctca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 876431 191 - 2385121 tgagccacagtgcccagccTA-TTCTGGAATTTTTAGTTAAATCAGGAACACATGAA----AAAGAAG-AAGCATAAATATTGAAATTAGTGTTATTC---------------------------ATGAAGAAC-------GAGAACTAA--TTAAGGAACTTAAATTAGGCAGAGGCAAAATGTAAA-TTAAATATACAAAAGTCAGTAGTTCTggccgggcacagtggctca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2313028 190 + 4274983 tgagccacagtgcccagccTA-TTCTGGAATTTTTAGTTAAATCAGGAACACATGAA----AAAGAAG-AAGCATAAATATTGAAATTAGCATTATTC---------------------------ATGAAGAAT-------GCGAACTAA---TAAGGAACTTAAAATAGAGAGAGGTAAAATGTAAA-CTAAATATACAAAAGTCAGTAGTTCTggccgggtatggtggctca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28546803 194 + 49145316 tgagccacggtgcccagcTTA-CTCTGTAAGTTTTAGTTAAATCAGGAACACATGAAAAAGAAGGAAG-AAGCATAAATATGGAAATTAACATTATTT---------------------------ATAAAAAAT-------GAGAACTAA---TAAGGAACTTAAATTAGGCAAAGGCAAAATGTAAA-TTAAATATACAAAAGTCAGTAGTCCTggccaggcgctgtggctca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5390443 190 + 8899380 tgagccacggtgcccagATTA-TTCTGTAATTTTTAGTTAAATCAGGAACACATGAA----AAGGAAG-AAGCATAAATATGGAAATTAACATTATTT---------------------------ATGAAAAAT-------GAGAACTAA---TAAGGAACTTAAATTAGGCAGAGGCAAAATGTAAA-TTAAATATACAAAAGTCAGTAGTCCTggccaggctctgtgtctca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1598359 186 - 2680843 tgagccacggtgcccagcTTA-TTTTGTAATTTTTAGTTAAATCAGGAACACATGAAAAAGAAGGAAG-AAGCATAAATATGGAAATTAATATTATTT---------------------------ATGAAAAAT-------GAGAACTAA---TAAGGAACTTAAATTAGGCAGAGGCAAAATGTAAA-TTAAATATACAAAAGTCAGTAGTCCTGGACAgg--------ctca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 349514 194 - 4471408 tgcgccacggtgcccagcTTA-TTCTGTAATTTTTAGTTAAATCAGGAACACATGAAAAAGAAGGAAG-AAGCATAAATATGGAAATTAACATTATTT---------------------------ATGAAAAAT-------GAGAACTAA---TAAGGAACCTAAATTAGCCAGAGGCAAAATGTAAA-TTAAATATACAAAAGTCAGTAGTCCTggccaggcgctgtggctca i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4601145 225 - 122678785 TGAGCCACCCGGGCTGCCCTCTTTCAGGAATTTTTAGCTAAATCAAGAACACATGAA----AAAAAAATCAGCATAAATATTGGGATTAATATTATTTGCCAGTGTTACAACTTTTCTACTTGGAATTAAGAATTCACTGAAAAACCTAGAACTAAAGGACTACAATTAG----AGGTAAACTATAAACTTATACATATAAAAACCAATAGT-AGgggcagcccgggtggctta i canFam3.chr1 I 1108 I 152 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5460730 3250 + 5549422 I e mm10.chr7 111076716 2045 - 145441459 I a score=1814728.000000 s hg38.chr19_GL383574v1_alt 58780 183 + 155864 tgcctgtaatcccagcactttgggaggccaaggcaggcggatcgcctgaggtcaggggttcgagaccagcctggccaaccaacatggtgaaaccc-catctctactaaaaatacaaaaattagccgggcatggtggcgtgcacctgtaatcccagctactcaggaggctgaggtggga---------gaaccc s panTro5.chr19 36127410 183 + 61309027 tgcctgtaatcccagcactttgggaggccaaggcaggcggatcgcctgaggtcaggggttcgagaccagcctggccaaccaacatggtgaaaccc-catctctactaaaaatacaaaaattagccgggcatggtggcgtgcacctgtaatcccagctactcaggaggctgaggtggga---------gaaccc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873349 183 + 64411610 tgcctgtaatcccagcactttgggaggccaaggcaggcggatcgcctgaggtcaggggttcgagaccagcctggccaaccaacatggtgaaaccc-catctctactaaaaatacaaaaattagccgggcatggtggcgtgcacctgtaatcccagctactcaggaggctgaggtggga---------gaaccc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291186 183 - 8369475 tgcctgtaatcccagcactttgggaggccaaggcaggtggatcgcctgaggtcaggggttcgagaccagcctggccaaccaacatggtgaaaccc-catctctactaaaaatacaaaaattagccgggcatggtggcgtgcacctgtaatcccagctactcaggaggctgaggtggga---------gaaccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63883804 192 - 106955855 tgcctgtaatcccagcactttgggaggccaaggcaggtggatcgcctgaggtcaggcgttcgagaccagcctggccagccaacatggtgaaaccc-catctctactaaaaatacaaaaattagccgggcatggtggcgtgcacctgtaatcccagctactcaggaggctgaggtgggagaatcacttgaacct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30194975 193 + 53671032 tgcttgtaatcccagcacttcgggaggccaaggcaggtggatcacctgcggtcaggggctcgagaccagcctggccaaccaacatggtgaaacccccatctctactaaaaatacaaaaattagcagggcatggtggcgtgcacctgtaatcccagctactcaggaggctgaggtgggagaatcacgtgaactc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34648723 193 + 59248254 tgcttgtaatcccagcacttcgggaggccaaggcaggtggatcacctgcggtcaggggctcgagaccagcctggccaaccaacatggtgaaacccccatctctactaaaaatacaaaaattagcagggcatggtggcgtgcacctgtaatcccagctactcaggaggctgaggtgggagaatcacgtgaactc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4515308 193 - 13342542 tgcttgtaatcccagcacttcgggaggccaaggcaggtggatcacctgcggtcaggggctcgagaccagcctggccaaccaacatggtgaaacccccatctctactaaaaatacaaaaattagcagggcatggtggcgtgcacctgtaatcccagctactcaggaggctgaggtgggagaatcacgtgaactc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5445771 193 + 7714307 tgcttgtaatcccagcactttgggaggccaaggcaggtggatcacctgcggtcaggggctcgagaccagcctggccaaccaacatggtgaaacccccatctctgctaaaaatacaaaaattagcagggcatggtggcgtgcacctgtaatcccagctactcaggaggctgaggtgggagaatcacgtgaactc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29252931 193 + 50890351 tgcttataatcccagcactttgggaggccaaggcaggtggatcacctgcggtcaggggctcaagaccagcctggccaaccaacatggtgaaaccctcatctctactaaaaatacaaaaattagcagggcatggtggcgtgcacctgtaatcccagctactcaggaggctgaggtgggagaatcacgtgaactc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 876622 193 - 2385121 tgcttgtaatcccagcactttgggaggccaaggcaggtggatcacctgcggtcaggggctcgagaccagcctggccaaccaacatcgtgaaacccccatctctactaaaaatacaaaaattagcagggcatggtggcatgcacctgtaatcccagctactcaggaggctgaggtgggagaatcacgtgaactc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2313218 193 + 4274983 tgcttgtaatcccagcactttgggaggccaaggcaggtggatcacctgcggtcaggggttcgaaactagcctggccaaccaacatggtgaaacccccatctctactaaaaataaaaatattagcagggcatggtggcgtgcacctgtaatcccagctgctcaggaggctgaggtgggagaatcacgtgaactt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28546997 183 + 49145316 tgcctgcaatcccagcactttgggaggccaagacaggtagatcacctgaggttaagagtaggagaacagcttggccagccaacatggtgaaaccc-catctgtactaaaaatacaaaaattaaccgggcatggtgtcatgtatctgtaatcccagctactctggaggctgaggtgagagaatct--------- i calJac3.chr22 C 0 I 9 s saiBol1.JH378197 5390633 183 + 8899380 tgcctgtaatcccagcactttggaaggccaaggcaggtagatcacctgaggtcaggagttggagaacagcctggccaaccaacatggtgaaaccc-catctgtactaaaaatacaaaaattagccaggcatggtgtcatgtacctgtaatcccagctactctggaggctgaggtgagagaattg--------- i saiBol1.JH378197 C 0 I 9 s cebCap1.NW_016107633v1 1598545 183 - 2680843 tgcctgtaatcccagcactttgagaggccaaggcaggtggatcacctgaggtcaggagttggagaacagcctggccaaccaacatggtgagaccc-catctgtagtaaaaatacaaaaattagccaggcatggtgtcatgtacctgtaatcccagctactctggaggctgaggtgagagaatct--------- i cebCap1.NW_016107633v1 C 0 I 9 s aotNan1.NW_018505377v1 349708 183 - 4471408 tgcctgtaatcccagcactttgggaggccaaggcaggtagatcacctgaggtcaggagttggagaacagcctggccaaccaacacagtgaaaccc-catctgtactaaaaatacaaaaattagccgggcatggtgtcatgtacctgtaatcccagctactctggaggctgaggtgagagaatcg--------- i aotNan1.NW_018505377v1 C 0 I 271 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5460730 3250 + 5549422 I e mm10.chr7 111076716 2045 - 145441459 I e canFam3.chr1 4601370 152 - 122678785 I a score=83093.000000 s hg38.chr19_GL383574v1_alt 58963 9 + 155864 gggaggcag s panTro5.chr19 36127593 9 + 61309027 gggaggcag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873532 9 + 64411610 gggaggcag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291369 9 - 8369475 gggaggcag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63883996 9 - 106955855 gggaggcag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195168 9 + 53671032 gggaggcag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34648916 9 + 59248254 gggaggcag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4515501 9 - 13342542 gggaggcag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5445964 9 + 7714307 gggaggcag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29253124 9 + 50890351 gggaggcag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 876815 9 - 2385121 gggaggcag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2313411 8 + 4274983 agga-gcag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28547189 9 + 49145316 aggaagcag i calJac3.chr22 I 9 I 318 s saiBol1.JH378197 5390825 9 + 8899380 aggaggcag i saiBol1.JH378197 I 9 C 0 s cebCap1.NW_016107633v1 1598737 9 - 2680843 aggaagcag i cebCap1.NW_016107633v1 I 9 C 0 s aotNan1.NW_018505377v1 350162 9 - 4471408 gggaggcca i aotNan1.NW_018505377v1 I 271 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5460730 3250 + 5549422 I e mm10.chr7 111076716 2045 - 145441459 I e canFam3.chr1 4601370 152 - 122678785 I a score=398496.000000 s hg38.chr19_GL383574v1_alt 58972 42 + 155864 aggttgcagtgagccgagatcacgctactgcactccagcttg s panTro5.chr19 36127602 42 + 61309027 aggttgcagtgagccgagatcacgctactgcactccagcttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873541 42 + 64411610 aggttgcagtgagccgagatcacgctactgcactccagtctg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291378 42 - 8369475 aggttgcagtgagccgagatcacgctactgcactccagcttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884005 42 - 106955855 aggttgtagtgagccaagatcacactaccgcactccagcttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195177 42 + 53671032 agattgcagtgagccaagatcacgctactgcactccagcttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34648925 42 + 59248254 agattgcagtgagccaagatcacgctactgcactccagcttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4515510 42 - 13342542 agattgcagtgagccaagatcacgctactgcactccagcttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5445973 42 + 7714307 agattgcggtgagccaagatcacgctactgcactccagcttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29253133 42 + 50890351 agattgcagtgagctaagatcacgccactgcactccagcttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 876824 42 - 2385121 agattgcagtgagccaagatcacgctactgcactccggcttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2313419 42 + 4274983 aggttacagtgagccaagatcacactactgcactccagcttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28547516 42 + 49145316 aggttgcagtgagccgagatcacaccactgcactctaatctg i calJac3.chr22 I 318 C 0 s saiBol1.JH378197 5390834 42 + 8899380 atgttgcagtgagctgagattgtgctgctgctctccagcctg i saiBol1.JH378197 C 0 I 362 s cebCap1.NW_016107633v1 1598746 42 - 2680843 aggttgcagtgagctgagattgtgctgctgctctccagcctg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350171 42 - 4471408 aggttgcagtgagccgagatcgcaccactgcactctaatctg i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5460730 3250 + 5549422 I e mm10.chr7 111076716 2045 - 145441459 I e canFam3.chr1 4601370 152 - 122678785 I a score=149930.000000 s hg38.chr19_GL383574v1_alt 59014 15 + 155864 ggcgacagagcgaga s panTro5.chr19 36127644 15 + 61309027 ggcgacagagcgaga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873583 15 + 64411610 ggcaacagagcaaga i panPan2.chr19 C 0 I 183 s gorGor5.CYUI01015150v1 6291420 15 - 8369475 ggcgacagagcgaga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884047 15 - 106955855 ggcgacaaagcgaga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195219 15 + 53671032 ggcaacagagcaaga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34648967 15 + 59248254 ggcaacagagcaaga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4515552 15 - 13342542 ggcaacagagcaaga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446015 15 + 7714307 ggcaacagagcaaga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29253175 15 + 50890351 ggcaacagagcaaga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 876866 15 - 2385121 ggcaacagagcaaga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2313461 15 + 4274983 ggcaacagagcaaga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28547558 15 + 49145316 ggcaagagagcaaga i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391238 15 + 8899380 ggcaacagagcaaga i saiBol1.JH378197 I 362 C 0 s cebCap1.NW_016107633v1 1598788 15 - 2680843 ggcgacagagtgaaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350213 15 - 4471408 ggcaacagagcaaga i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5460730 3250 + 5549422 I e mm10.chr7 111076716 2045 - 145441459 I e canFam3.chr1 4601370 152 - 122678785 I a score=40956.000000 s hg38.chr19_GL383574v1_alt 59029 5 + 155864 ctcca s panTro5.chr19 36127659 5 + 61309027 ctcca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873781 5 + 64411610 CTCCA i panPan2.chr19 I 183 C 0 s gorGor5.CYUI01015150v1 6291435 5 - 8369475 ctcca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884062 5 - 106955855 ctcca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195234 5 + 53671032 ctcca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34648982 5 + 59248254 ctcca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4515567 5 - 13342542 ctcca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446030 5 + 7714307 ctcca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29253190 5 + 50890351 ctcca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 876881 5 - 2385121 ctcca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2313476 5 + 4274983 ctcca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28547573 5 + 49145316 ttcct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391253 5 + 8899380 ttcct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1598803 5 - 2680843 ctctg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350228 5 - 4471408 ttcct i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5460730 3250 + 5549422 I e mm10.chr7 111076716 2045 - 145441459 I e canFam3.chr1 4601370 152 - 122678785 I a score=36256.000000 s hg38.chr19_GL383574v1_alt 59034 3 + 155864 tct s panTro5.chr19 36127664 3 + 61309027 tct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873786 3 + 64411610 TCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291440 3 - 8369475 tct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884067 3 - 106955855 ttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195239 3 + 53671032 tct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34648987 3 + 59248254 tct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4515572 3 - 13342542 tct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446035 3 + 7714307 tct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29253195 3 + 50890351 tct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 876886 3 - 2385121 tct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2313481 3 + 4274983 tct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28547578 3 + 49145316 tct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391258 3 + 8899380 tct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1598808 3 - 2680843 tct i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350233 3 - 4471408 tct i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4601522 3 - 122678785 tct i canFam3.chr1 I 152 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5460730 3250 + 5549422 I e mm10.chr7 111076716 2045 - 145441459 I a score=5274.000000 s hg38.chr19_GL383574v1_alt 59037 1 + 155864 t s panTro5.chr19 36127667 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873789 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291443 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884070 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195242 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34648990 1 + 59248254 t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4515575 1 - 13342542 t i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446038 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29253198 1 + 50890351 t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 876889 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2313484 1 + 4274983 c i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28547581 1 + 49145316 c i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391261 1 + 8899380 c i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107633v1 1598811 1 - 2680843 c i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350236 1 - 4471408 c i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111078761 1 - 145441459 t i mm10.chr7 I 2045 C 0 s canFam3.chr1 4601525 1 - 122678785 t i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947282 530 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5460730 3250 + 5549422 I a score=26917.000000 s hg38.chr19_GL383574v1_alt 59038 2 + 155864 aa s panTro5.chr19 36127668 2 + 61309027 aa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873790 2 + 64411610 AA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291444 2 - 8369475 aa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884071 2 - 106955855 aa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195243 2 + 53671032 aa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34648991 2 + 59248254 aa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4515576 2 - 13342542 aa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446039 1 + 7714307 -a i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29253199 2 + 50890351 aa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 876890 1 - 2385121 -a i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2313485 2 + 4274983 aa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28547582 2 + 49145316 aa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391263 2 + 8899380 aa i saiBol1.JH378197 I 1 C 0 s cebCap1.NW_016107633v1 1598812 2 - 2680843 aa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350237 2 - 4471408 aa i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3947812 2 - 30143674 aa i micMur3.chr22 I 530 C 0 s mm10.chr7 111078762 2 - 145441459 aa i mm10.chr7 C 0 C 0 s canFam3.chr1 4601526 2 - 122678785 aa i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e dasNov3.JH563638 305345 2564 + 643850 I e otoGar3.GL873654 5460730 3250 + 5549422 I a score=101042.000000 s hg38.chr19_GL383574v1_alt 59040 7 + 155864 aaaaaaa s panTro5.chr19 36127670 7 + 61309027 aaaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873792 7 + 64411610 AAAAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291446 7 - 8369475 aaaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884073 7 - 106955855 aaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195245 7 + 53671032 aaaaaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34648993 7 + 59248254 aaaaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4515578 7 - 13342542 aaaaaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446040 7 + 7714307 aaaaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29253201 7 + 50890351 aaaaaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 876891 7 - 2385121 aaaaaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2313487 7 + 4274983 aaaaaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28547584 7 + 49145316 caaaaaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391265 7 + 8899380 aaaaaaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1598814 7 - 2680843 aaaaaaa i cebCap1.NW_016107633v1 C 0 I 251 s aotNan1.NW_018505377v1 350239 7 - 4471408 aaaaaaa i aotNan1.NW_018505377v1 C 0 I 3 s micMur3.chr22 3947814 7 - 30143674 aaaaaaa i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5463980 7 + 5549422 aatatac i otoGar3.GL873654 I 3250 C 0 s mm10.chr7 111078764 7 - 145441459 aaataaa i mm10.chr7 C 0 C 0 s canFam3.chr1 4601528 7 - 122678785 aaaaaaa i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e dasNov3.JH563638 305345 2564 + 643850 I a score=-35335.000000 s hg38.chr19_GL383574v1_alt 59047 10 + 155864 --aaaaaTTTAA s panTro5.chr19 36127677 9 + 61309027 --aaaaa-TTAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873799 7 + 64411610 --AAA---TTAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291453 10 - 8369475 --aaaaaTTTAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884080 8 - 106955855 --aaaa--TTAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195252 2 + 53671032 ----------aa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649000 2 + 59248254 ----------aa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4515585 2 - 13342542 ----------aa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446047 2 + 7714307 ----------aa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29253208 2 + 50890351 ----------aa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 876898 2 - 2385121 ----------aa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2313494 6 + 4274983 --aa----TTAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28547591 10 + 49145316 --aaaaaaTCAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391272 10 + 8899380 --aaaaaaTCAG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 350249 10 - 4471408 --aaaaaaTCAA i aotNan1.NW_018505377v1 I 3 C 0 s micMur3.chr22 3947821 9 - 30143674 ---aAAAATCAG i micMur3.chr22 C 0 I 3 s otoGar3.GL873654 5463987 9 + 5549422 ---aaaagtcaa i otoGar3.GL873654 C 0 I 3 s mm10.chr7 111078771 8 - 145441459 ----AAATTTAA i mm10.chr7 C 0 I 8 s canFam3.chr1 4601535 12 - 122678785 ACAAAACAGTAG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e dasNov3.JH563638 305345 2564 + 643850 I e cebCap1.NW_016107633v1 1598821 251 - 2680843 I a score=1033614.000000 s hg38.chr19_GL383574v1_alt 59057 98 + 155864 TAGTCCTAAAGCCTAATCCATTGAT--------TATGTAATGAGGAGAAAA---GA---TGATTACAGTAATGCAAAATAGAAATTGTATACAAAATATATAATAAGAAATA s panTro5.chr19 36127686 98 + 61309027 TAGTCCTAAAGCCTAATCCATTGAT--------TATGTAATGAGGAGAAAA---GA---TGATTACAGTAATGCAAAATAGAAATTGTATACAAAATATATAATAAGAAATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873806 98 + 64411610 TAGTCCTAAAGCCTAATCCATTGAT--------TATGTAATGAGGAGAAAA---GA---TGATTACAGTAATGCAAAATAGAAATTGTATACAAAATATATAATAAGAAATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291463 98 - 8369475 TAGTCCTAAAGCCTAATCCATTGAT--------TATGTAATGAGGAGAAAA---GA---TGATTACAGTAATGCAAAATAGAAATTGTATACAAAATATATAATAAGAAATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884088 98 - 106955855 TAGTCCTAAAGCCTAATCCATTGAT--------TATGTAATGAGGAGAAAA---GA---TGATTACAGTAATGCAAAATAGAAATTGTATACAAAATATGTAATAAGAAATA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195254 94 + 53671032 TAGTCCTAAAGCCTAATCCATTGAT--------TATGTAATAAGGAGAAAA---------GATTACAGTAATGTAAAATAGAAATTGTATACAAAATATAT-ATAAGAAATA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649002 94 + 59248254 TAGTCCTAAAGCCTAATCCATTGAT--------TATGTAATAAGGAGAAAA---------GATTACAGTAATGTAAAATAGAAATTGTATACAAAATATAT-ATAAGAAATA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4515587 94 - 13342542 TAGTCCTAAAGCCTAATCCATTGAT--------TATGTAATAAGGAGAAAA---------GATTACAGTAATGTAAAATAGAAATTGTATACAAAATATAT-ATAAGAAATA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446049 95 + 7714307 TAGTCCTAAAGCCTAATCCATTGAT--------TATGTAATAAGGAGAAAA---------GATTACAGTAATGCAAAATAGAAATTGTATACAAAATATATAATAAGAAATA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29253210 95 + 50890351 aaGTCCTAAAGCCTAATCCATTGAT--------TATGTAATAAGGAGAAAA---------GATTACAGTAATGCAAAATAGAAATTGTATACAAAATATATAATAAGAAATA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 876900 95 - 2385121 TAGTCCTAAAGCCTAATCCATTGAT--------TATATAATAAGGAGAAAA---------GATTACAGTAATGCAAAATAGAAATTGTATACAAAATATATAATAAGAAATA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2313500 95 + 4274983 TAGTCCTAAAGCCTAATCCATTGAT--------TATGTAATAAGGAGAAAA---------GATTACAGTAATGCAAAATAGAAATTGTATACAAAATATATAATAAGAAATA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28547601 103 + 49145316 TAGTCCTAAAGTCTAATCCATTGACCCATTGAGTATGTAATGGAGATAAAA---GA---TGATTACAATAACCCAAAATACAAATTATGTATGAAATCT---ATAAGAAATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391282 103 + 8899380 TAGTCCTAAAGTCTAATCCATTGATCCATTGAGTATGTAATGGGGATAAAA---GA---TGATTACAATAATACAAAATAGAAATTATGTATGAAATCT---ATAAGGACTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599072 103 - 2680843 TAGTCCTAAAGTCTAATCCATTGATCCATTGAGTATGTAGTAGGGATAAAA---GA---TGATTACAATAATACAAGATAGAAATTATACATGAAATCT---ATAAGGAATA i cebCap1.NW_016107633v1 I 251 C 0 s aotNan1.NW_018505377v1 350259 103 - 4471408 TAGTCCTAAAGTCTAATCGATTGATCCATTGAGTATGTAATGGGAATAAAA---GA---TGATTGCAATAATACAAAATAGAAATTATATATGAAATCT---ATAAGGAATA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3947833 101 - 30143674 TTGTCCTAAAACCTAATCCATTGAT--------TATATAATGGGGATAAAAGATGA---TGTTCACAATAATGCAAAAAGTAAATTATGTACAAAGTATGTAATAAGAAATA i micMur3.chr22 I 3 I 152 s otoGar3.GL873654 5463999 86 + 5549422 tTGTCCTAAAACCTAATCC----AT--------TATGTGATGGGGATAAAAGAGGA---TGTTCACAATA---CAAAAAAGAAAGTAGATACAAAATACATACT-------- i otoGar3.GL873654 I 3 C 0 s mm10.chr7 111078787 95 - 145441459 TTGTCTTAATAC--AGTCTAC--AT--------GCTATAATGGAGATAAGA---GAAACAGCTTTCAGTAATGAGAAATCAAAATTATGTATGAAATATAT--TAAGAAACC i mm10.chr7 I 8 I 12 s canFam3.chr1 4601547 84 - 122678785 TTGTCCTAAAACCTAACCCACTGAT--------CATATAATGGAGATAAAA---GA---TGTTCACAATAAAG--AAATAGAAATTATATGTGAAATACG------------ i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e dasNov3.JH563638 305345 2564 + 643850 I a score=227660.000000 s hg38.chr19_GL383574v1_alt 59155 19 + 155864 AGTTGGTCATACTAAGAAA s panTro5.chr19 36127784 19 + 61309027 AGTTGGTCATACTAAGAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873904 19 + 64411610 AGTTGGTCATACTAAGAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291561 19 - 8369475 AGTTGGTCATACTAAGAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884186 19 - 106955855 AGTTGGTCATACTAAGAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195348 19 + 53671032 AGTTAGTCATACTAAGAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649096 19 + 59248254 AGTTGGTCATACTAAGAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4515681 19 - 13342542 AGTTGGTCATACTAAGAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446144 19 + 7714307 AGTTGGTCATACTAAGAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29253305 19 + 50890351 AGTTGGTCATACTAAGAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 876995 19 - 2385121 AGTTGGTCATACTAAGAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2313595 19 + 4274983 AGTTGGTCACACTAAGAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28547704 19 + 49145316 AATTGGTAATACTAAGAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391385 19 + 8899380 AATTGGTCATACTAAGAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599175 19 - 2680843 AATTGGTCATACTAAGAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350362 19 - 4471408 AATTGGTCATACTAAGAAA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5464085 11 + 5549422 --------ATAATAAGAAA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111078894 19 - 145441459 AGTTTGTTGTAATGAGAGA i mm10.chr7 I 12 I 534 s canFam3.chr1 4601631 7 - 122678785 ------------TAAGAAA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I a score=216800.000000 s hg38.chr19_GL383574v1_alt 59174 21 + 155864 TATGACCAACTTCTATGATAA s panTro5.chr19 36127803 21 + 61309027 TATGACCAACTTCTATGATAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873923 21 + 64411610 TATGACCAACTTCTATGATAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291580 21 - 8369475 TATGACCGACTTCTATGATAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884205 21 - 106955855 TATAACCAACTTCTATGATAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195367 21 + 53671032 TATGACCAACTTCTATGATAA i rheMac8.chr19 C 0 I 350 s macFas5.chr19 34649115 17 + 59248254 TATGACCAACTTCCATG---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4515700 21 - 13342542 TATGACCAACTTCTATGATAA i macNem1.NW_012011689v1 C 0 I 352 s cerAty1.NW_012005268v1 5446163 21 + 7714307 TATGACCAGCTTCTATGATAA i cerAty1.NW_012005268v1 C 0 I 350 s chlSab2.chr6 29253324 21 + 50890351 TATGACCAACTTCTATGATAA i chlSab2.chr6 C 0 I 346 s manLeu1.NW_012102454v1 877014 21 - 2385121 TATGTCCAACTTCTATGATAA i manLeu1.NW_012102454v1 C 0 I 348 s colAng1.NW_012111697v1 2313614 21 + 4274983 TATGACCAACTTCTATGATAA i colAng1.NW_012111697v1 C 0 I 322 s calJac3.chr22 28547723 21 + 49145316 TATGACCATCTTCTACGATGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391404 21 + 8899380 TATGACCATCTTCTATGATGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599194 21 - 2680843 TATGACCATCTTCTATGATGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350381 21 - 4471408 TATGACCATCTTCTATGATGA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5464096 21 + 5549422 CACAGCCAACTTCTGTGATGA i otoGar3.GL873654 C 0 I 7 s canFam3.chr1 4601638 21 - 122678785 TTCAGCAGACCTCTGTAGAAA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e mm10.chr7 111078913 534 - 145441459 I a score=40144.000000 s hg38.chr19_GL383574v1_alt 59195 12 + 155864 ----ATAATGTAAGAC s panTro5.chr19 36127824 12 + 61309027 ----ATAATGTAAGAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873944 12 + 64411610 ----ATAATGTAAGAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291601 12 - 8369475 ----ATAATGTAAGAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884226 12 - 106955855 ----ATAATATAAGAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34649132 12 + 59248254 ----ATAATGTAAGAG i macFas5.chr19 C 0 C 0 s calJac3.chr22 28547744 12 + 49145316 ----ATAATGTAATAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391425 12 + 8899380 ----ATAATGTAATAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599215 12 - 2680843 ----ATAATGTAATAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350402 12 - 4471408 ----ATAATGTAATAG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5464124 10 + 5549422 ----GTACTTTA--AC i otoGar3.GL873654 I 7 C 0 s canFam3.chr1 4601659 16 - 122678785 ATACAAAATGTAGTAG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e dasNov3.JH563638 305345 2564 + 643850 I e mm10.chr7 111078913 534 - 145441459 I e chlSab2.chr6 29253345 346 + 50890351 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I e manLeu1.NW_012102454v1 877035 348 - 2385121 I e cerAty1.NW_012005268v1 5446184 350 + 7714307 I e macNem1.NW_012011689v1 4515721 352 - 13342542 I e rheMac8.chr19 30195388 350 + 53671032 I a score=116289.000000 s hg38.chr19_GL383574v1_alt 59207 21 + 155864 AGGGACATAA---AAGTTGCATGT s panTro5.chr19 36127836 21 + 61309027 AGGGACATAA---AAGTTGCATGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873956 21 + 64411610 AGGGACATAA---AAGTTGCATGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291613 21 - 8369475 AGGGACATAA---AAGTTGCATGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884238 21 - 106955855 AGGGACATAA---AAGTTGCATAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34649144 21 + 59248254 AGGGACTTAA---AAGTCACATAT i macFas5.chr19 C 0 I 309 s calJac3.chr22 28547756 21 + 49145316 AGGGACATAA---AAGTCACATAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391437 21 + 8899380 AGGGACATAA---AAGTCACATAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599227 21 - 2680843 AGGGACATAA---AAGTCACATAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350414 21 - 4471408 AGGGACATAA---AAGTCACATAT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5464134 24 + 5549422 AGGGACGTAAAGGAGGTCACATAT i otoGar3.GL873654 C 0 I 1 s canFam3.chr1 4601675 24 - 122678785 AGGGACATAAAAGAAGTCACATGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 307909 23 + 643850 AGGGACATAA-AGAAGTCACATAT i dasNov3.JH563638 I 2564 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e mm10.chr7 111078913 534 - 145441459 I e chlSab2.chr6 29253345 346 + 50890351 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I e manLeu1.NW_012102454v1 877035 348 - 2385121 I e cerAty1.NW_012005268v1 5446184 350 + 7714307 I e macNem1.NW_012011689v1 4515721 352 - 13342542 I e rheMac8.chr19 30195388 350 + 53671032 I a score=66641.000000 s hg38.chr19_GL383574v1_alt 59228 14 + 155864 AATGGAAAAAACAT s panTro5.chr19 36127857 14 + 61309027 AATGGAAAAAACAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873977 14 + 64411610 AATGAAAAAAACAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291634 14 - 8369475 AATGGAAAAAACAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884259 14 - 106955855 AATGGAAGAAACAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34649474 14 + 59248254 AATGGAAGAAACAT i macFas5.chr19 I 309 C 0 s calJac3.chr22 28547777 14 + 49145316 AATGGAAGAGGCAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391458 14 + 8899380 AATCAAATAAGCAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599248 14 - 2680843 AATGGAAGAAACAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350435 14 - 4471408 AATGGAAGAAGCAT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5464159 14 + 5549422 AGAGAGAGAAACAT i otoGar3.GL873654 I 1 C 0 s canFam3.chr1 4601699 14 - 122678785 AATCAGAGAAACAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 307932 14 + 643850 AATGGGAGAATTAT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e mm10.chr7 111078913 534 - 145441459 I e chlSab2.chr6 29253345 346 + 50890351 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I e manLeu1.NW_012102454v1 877035 348 - 2385121 I e cerAty1.NW_012005268v1 5446184 350 + 7714307 I e macNem1.NW_012011689v1 4515721 352 - 13342542 I e rheMac8.chr19 30195388 350 + 53671032 I a score=191051.000000 s hg38.chr19_GL383574v1_alt 59242 15 + 155864 ATCTTATTGCTAGAT s panTro5.chr19 36127871 15 + 61309027 ATCTTATTCCTAGAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39873991 15 + 64411610 ATCTTATTCCTAGAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291648 15 - 8369475 ATCTTATTCCTAGAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884273 15 - 106955855 ATCTTATTCCTAGAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195738 15 + 53671032 ATCTTATTCCTAGAT i rheMac8.chr19 I 350 C 0 s macFas5.chr19 34649488 13 + 59248254 --CTTATTCCTAGAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516073 15 - 13342542 ATCTTATTCCTAGAT i macNem1.NW_012011689v1 I 352 C 0 s cerAty1.NW_012005268v1 5446534 15 + 7714307 ATCTTATTCCTAGAT i cerAty1.NW_012005268v1 I 350 C 0 s chlSab2.chr6 29253691 15 + 50890351 ATCTTATTCCTAGAT i chlSab2.chr6 I 346 C 0 s manLeu1.NW_012102454v1 877383 15 - 2385121 ATCTTATTCCTAGAT i manLeu1.NW_012102454v1 I 348 C 0 s calJac3.chr22 28547791 15 + 49145316 ATCATATTCCTAGAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391472 15 + 8899380 ATCTTATTCCTAGAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599262 15 - 2680843 ACCTTATTCCTAGAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350449 15 - 4471408 ATCTTATTCCTAGAT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5464173 15 + 5549422 GCCTTGTTCCTAGAT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4601713 15 - 122678785 ATCTTATTCCTAGAT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 307946 15 + 643850 ATTTTGTTCCTAGAT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e mm10.chr7 111078913 534 - 145441459 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=12376.000000 s hg38.chr19_GL383574v1_alt 59257 1 + 155864 A s panTro5.chr19 36127886 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874006 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291663 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884288 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195753 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649501 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516088 1 - 13342542 A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446549 1 + 7714307 A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29253706 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 877398 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28547806 1 + 49145316 A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391487 1 + 8899380 A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599277 1 - 2680843 A i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350464 1 - 4471408 A i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4601728 1 - 122678785 A i canFam3.chr1 C 0 I 325 s dasNov3.JH563638 307961 1 + 643850 A i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e otoGar3.GL873654 5464188 0 + 5549422 C e mm10.chr7 111078913 534 - 145441459 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=51715.000000 s hg38.chr19_GL383574v1_alt 59258 6 + 155864 -GAAGAA s panTro5.chr19 36127887 6 + 61309027 -GAAGAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874007 6 + 64411610 -GAAGAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291664 6 - 8369475 -GAAGAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884289 6 - 106955855 -GAAGAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195754 6 + 53671032 -AAAGAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649502 6 + 59248254 -AAAGAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516089 6 - 13342542 -AAAGAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446550 6 + 7714307 -AAAGAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29253707 6 + 50890351 -AAAGAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 877399 6 - 2385121 -AAAGAA i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28547807 6 + 49145316 -AAAGAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391488 6 + 8899380 -AAAGAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599278 6 - 2680843 -AAAGAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350465 6 - 4471408 -AAAGAA i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 307962 6 + 643850 CAAAGA- i dasNov3.JH563638 C 0 I 5 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e otoGar3.GL873654 5464188 0 + 5549422 C e mm10.chr7 111078913 534 - 145441459 I e canFam3.chr1 4601729 325 - 122678785 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=929876.000000 s hg38.chr19_GL383574v1_alt 59264 110 + 155864 CAAGAACAGTAccagcacttagggaggcaaagccaggatgatcacttgag-cccacgagtttgagaccagcctgagcaacgtagtgaaacttcatctctaccaaaaaattt s panTro5.chr19 36127893 110 + 61309027 CAAGAACAGTAccagcacttagggaggcaaagccaggatgatcacttgag-cccacaagtttgagaccagcctgggcaacgtagtgaaacttcatctctaccaaaaaattt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874013 110 + 64411610 CAAGAACAGTAccagcacttagggaggcaaagccaggatgatcacttgag-cccacgagtttgagaccagcctgggcaacgcagtgaaacttcatctctaccaaaaaattt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291670 110 - 8369475 CAAGAACAGTAccagcacttagggaggcaaagccaggatgatcacttgag-cccacgagtttgagaccagcctgggcaatgtagtgaaacttcatctctaccaaaaaattt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884295 110 - 106955855 CAAGAACAGTAccagcacttagggaggcaaagccaggacgatcacttgag-cccatgagtttgagaccagcctgggcaacatagtgaaacttcatctctaccaaaaaattt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195760 110 + 53671032 CAAGAATGTTAccagcacttagggaggcagagccaggatgatcacctgag-tccaggagtttgagaccagcctgagcaatgtagtgaaacatcatctctaccaaaaaattt i rheMac8.chr19 C 0 I 1 s macFas5.chr19 34649508 110 + 59248254 CAAGAATGTTAccagcacttagggaggcagagccaggatgatcacctgag-tccaggagtttgagaccagcctgagcaatgtagtgaaacatcatctctaccaaaaaattt i macFas5.chr19 C 0 I 1 s macNem1.NW_012011689v1 4516095 110 - 13342542 CAAGAATGTTAccagcacttagggaggcagagccaggatgatcacctgag-tccaggagtttgagaccatcctgagcaatgtagtgaaacatcatctctaccaaaaaattt i macNem1.NW_012011689v1 C 0 I 1 s cerAty1.NW_012005268v1 5446556 110 + 7714307 CAAGAATGTTAccagcacttagggaggcagagccaggatgatcacctgag-tccaggagtttgagaccagcctgagcaatgtagtgaaacatcatctctaccaaaaaattt i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29253713 110 + 50890351 CAAGAACATTAccagcacttagggaggcagagccaggatgatcacctgag-tccaggagtttgagaccagcctgagcaacgtagtgaaacatcatcactaccaaaaaattt i chlSab2.chr6 C 0 I 306 s manLeu1.NW_012102454v1 877405 110 - 2385121 CAAGAATGTTAccagcacttagggaggcagagccaggatgatcacctgag-tccaggagtttgagaccagcctgagcaatgtagtgaaacatcatctctaccaaaaaattt i manLeu1.NW_012102454v1 C 0 I 1 s calJac3.chr22 28547813 111 + 49145316 CAAGAAGAGTAccagcacttagggaggatgagccaggatgatcatttgagccccaggagtttgagaccagcctaggcgacatagtgagacttcatctctacctagaaattt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391494 111 + 8899380 CAAGAAGAGTAccagcacttagggaggctgagccaggatgatcacttgagccccaggagtttgagaccagcctaggcaacatagtgagacttcatctctacccaggaattt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599284 111 - 2680843 CAAGAAGAGTAccagcacttagggaggctgagccaggatgatcacttgagccccaggagtttgagaccagcctaggcaacatagtgagacttcatctctacccagaaattt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350471 111 - 4471408 CAAGAAGAGTAccagtacttagggaggctgagccaggatgatcacttgagccccaggagtttgagaccagcctaggcaacatagtgagacttcatctctacccagaaattt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e dasNov3.JH563638 307968 5 + 643850 I e otoGar3.GL873654 5464188 0 + 5549422 C e mm10.chr7 111078913 534 - 145441459 I e canFam3.chr1 4601729 325 - 122678785 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=-7744.000000 s hg38.chr19_GL383574v1_alt 59374 1 + 155864 -t s panTro5.chr19 36128003 1 + 61309027 -t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874123 1 + 64411610 -t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291780 1 - 8369475 -t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884405 1 - 106955855 -t i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28547924 1 + 49145316 a- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391605 1 + 8899380 a- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599395 1 - 2680843 a- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350582 1 - 4471408 a- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e dasNov3.JH563638 307968 5 + 643850 I e otoGar3.GL873654 5464188 0 + 5549422 C e mm10.chr7 111078913 534 - 145441459 I e chlSab2.chr6 29253823 306 + 50890351 I e canFam3.chr1 4601729 325 - 122678785 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I e manLeu1.NW_012102454v1 877515 1 - 2385121 I e cerAty1.NW_012005268v1 5446666 1 + 7714307 I e macNem1.NW_012011689v1 4516205 1 - 13342542 I e macFas5.chr19 34649618 1 + 59248254 I e rheMac8.chr19 30195870 1 + 53671032 I a score=1219934.000000 s hg38.chr19_GL383574v1_alt 59375 156 + 155864 aaaaataagcagagtatgatggtggacacctgtggtcctagctactcaaga---------------------ggctgagacaggagg---atcacttgagcccaggaggccgaggctgcagtgagccctaactgcactacctcactccagcctgggcgacagaaccaagaccctgtcccc s panTro5.chr19 36128004 156 + 61309027 aaaaataagcagagtatgatggtggacacctgtggtcctagctactcaaga---------------------ggctgagacaggagg---atcacttgagcccaggaggccgaggctgtagtgagccctaactgcactacctcactccagcctgggcgacagaaccaagaccctgtcccc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874124 156 + 64411610 aaaaataagcagagtatgatggtggacacctgtggtcctagctactcaaga---------------------ggctgagacaggatg---atcacttgagcccaggaggccgaggctgaagtgagccctaactgcactacctcactccagcctgggcgacagaaccaagaccctgtcccC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291781 155 - 8369475 aaaaa-aagcagagtatgatggtggacacctgtggtcctagctactcaaga---------------------ggctgagacaggagg---atcatttgagcccaggaggccgaggctgcagtgagccctaactgcactacctcactccagcctgggcgacagaaccaagaccctgtcccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884406 156 - 106955855 aaaaataagcagagtatgatggtggacacctgtggtcctagctactcaaga---------------------ggctgagacaggaga---atcacatgagcccaggaggccaaggctgcagtgagtcctaactgcactacctcactccagcctgggggacagaaccgagatcctgtctcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30195871 154 + 53671032 aaaaataagcagagtatgatggtggacatctgtggtcctagctactcaaga---------------------ggctgaggcaggagg---atcacttgagcccaggaggccgaggctgcagtgagcgctaactgcaccacctcactccaccctgggcgacagaaacaagac--tgtctcc i rheMac8.chr19 I 1 C 0 s macFas5.chr19 34649619 154 + 59248254 aaaaataagcagagtatgatggtggacatctgtggtcctagctactcaaga---------------------ggctgaggcaggagg---atcacttgagcccaggaggccgaggctgcagtgagcgctaactgcaccacctcactccaccctgggcgacagaaacgagac--tgtctcc i macFas5.chr19 I 1 C 0 s macNem1.NW_012011689v1 4516206 154 - 13342542 aaaaataagcagagtatgatggtggacacctgtggtcctagctactcaaga---------------------ggctgaggcaggagg---atcacttgagcccaggaggccgaggctgcagtgagtgctaactgcaccacctcactccaccctgggcgacagaaacgagac--tgtctcc i macNem1.NW_012011689v1 I 1 C 0 s cerAty1.NW_012005268v1 5446667 154 + 7714307 aaaaataagcagagtatgatggtggacacctgtggtcctagctactcaaga---------------------gggtgaggcaggagg---atcacttgagcccaggaggccgaggctgcagtgagcgccaactgcaccacctcactccaccctgggcgacagaaacgagac--tgtctcc i cerAty1.NW_012005268v1 I 1 C 0 s chlSab2.chr6 29254129 154 + 50890351 aaaaataagcagagtatgatggtggacacctgtggtcctagctactcaaga---------------------ggctgaggcaggagg---atcacttgagccctggaggccgaggctgcagtgagccctaactgcaccacctcactccaccctgggcgacagagacgagac--cgtctcc i chlSab2.chr6 I 306 C 0 s manLeu1.NW_012102454v1 877516 152 - 2385121 aaaaataagcagagtatgatggtggacacctgtggtcctagctactcaaga---------------------ggctgaggcaggagg---atcacttgagcccaggaggccgaggctgcagtgagccctaactgcaccacctcactccaccctgggcgacagaaacaagac----tctcc i manLeu1.NW_012102454v1 I 1 C 0 s calJac3.chr22 28547925 179 + 49145316 aaaaccaagcagagtatgatggtgcaaacctgtggtcctagctactcaaggatacctaggtcctatcctcctagctgaggcaggaggatcatcacttgag-ccaggagtctgaggctacagtattgcatttatgtactacctcactccagcctgggcgacagaatcaagaccctgtctcc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391606 155 + 8899380 aaaactaagcagagtatgatgatgcaaacctgtggttctagccacccaaga---------------------agctgaggcaggagg---atcacttgag-ccaggagtctgaggctgccgtattacatttatgtactacctcactccagcctgggccacataaccaagaccctgtctcc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599396 155 - 2680843 aaaactaagcagagtatgatggtgcaaacctgtggtcctagctactcaaga---------------------agctgaggcaggagg---atcacttgag-ccaggagtctgaggctgcagtattatatttatgtaccacctcactccagcctgggccacagaaccaagaccctatctcc i cebCap1.NW_016107633v1 C 0 I 45 s aotNan1.NW_018505377v1 350583 155 - 4471408 aaaactaagcagagtatgatggtgcaaacctgtggtcctagctactcaaga---------------------agctgaggcaggagg---atcacttgag-ccaggagtctgaggctgcagcattacatttatgtactacctcactccagcctgggcaacagaaccaagaccatgtctcc i aotNan1.NW_018505377v1 C 0 I 40 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e dasNov3.JH563638 307968 5 + 643850 I e otoGar3.GL873654 5464188 0 + 5549422 C e mm10.chr7 111078913 534 - 145441459 I e canFam3.chr1 4601729 325 - 122678785 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=-24895.000000 s hg38.chr19_GL383574v1_alt 59531 4 + 155864 c----ccc s panTro5.chr19 36128160 4 + 61309027 c----ctc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874280 4 + 64411610 C----CCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291936 4 - 8369475 c----tca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884562 4 - 106955855 c----aaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196025 5 + 53671032 c---aaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649773 5 + 59248254 c---aaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516360 6 - 13342542 ca--aaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446821 4 + 7714307 c----aaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254283 2 + 50890351 c------a i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 877668 5 - 2385121 c---aaaa i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548104 7 + 49145316 -aaaaaaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391761 7 + 8899380 -aaaaaaa i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e dasNov3.JH563638 307968 5 + 643850 I e otoGar3.GL873654 5464188 0 + 5549422 C e mm10.chr7 111078913 534 - 145441459 I e canFam3.chr1 4601729 325 - 122678785 I e aotNan1.NW_018505377v1 350738 40 - 4471408 I e cebCap1.NW_016107633v1 1599551 45 - 2680843 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=71212.000000 s hg38.chr19_GL383574v1_alt 59535 12 + 155864 aaaaaaaaaaGA----- s panTro5.chr19 36128164 11 + 61309027 -caaaaaaaaGA----- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874284 12 + 64411610 CCAAAAAAAAGA----- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291940 12 - 8369475 aaaaaaaaaaGA----- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884566 17 - 106955855 aaaaaaaaaaGATTCAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196030 17 + 53671032 aaaaaaaaaaGATTCAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649778 17 + 59248254 aaaaaaaaaaGATTCAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516366 17 - 13342542 aaaaaaaaaaGATTCAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446825 17 + 7714307 aaaaaaaaaaGATTCAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254285 17 + 50890351 aaaaaaaaaaGATTCAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 877673 17 - 2385121 aaaaaaaaaaGATTCAG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548111 17 + 49145316 gaaaacaaaaGATTCAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391768 17 + 8899380 gaaaaaaaaaGATTCAA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5464188 11 + 5549422 ------AAAAAACTCAG i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e dasNov3.JH563638 307968 5 + 643850 I e mm10.chr7 111078913 534 - 145441459 I e canFam3.chr1 4601729 325 - 122678785 I e aotNan1.NW_018505377v1 350738 40 - 4471408 I e cebCap1.NW_016107633v1 1599551 45 - 2680843 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=105633.000000 s hg38.chr19_GL383574v1_alt 59547 19 + 155864 TGTTGGGAAGACTTTACTC s panTro5.chr19 36128175 19 + 61309027 TGTTGGGAAGACTTTACTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874296 19 + 64411610 TGTTGGGAAGACTTTACTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291952 19 - 8369475 TGTTGGGAAGACTTTACTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884583 19 - 106955855 TATTGAGAAGACTTTACTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196047 19 + 53671032 TATTGAGAAGACTTTACTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649795 19 + 59248254 TATTGAGAAGACTTTACTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516383 19 - 13342542 TATTGAGAAGACTTTACTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446842 19 + 7714307 TATTGAGAAGACTTTACTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254302 19 + 50890351 TATTGAGAAGACTTTACTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 877690 19 - 2385121 TATTGAGAAGACTTTACTT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548128 14 + 49145316 TATTGAGAACACTT----- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391785 14 + 8899380 TATTGAGAACACTT----- i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5464199 15 + 5549422 CATTGAGAAAACGTT---- i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 307973 17 + 643850 TATTTGGAAGACTATTT-- i dasNov3.JH563638 I 5 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e mm10.chr7 111078913 534 - 145441459 I e canFam3.chr1 4601729 325 - 122678785 I e aotNan1.NW_018505377v1 350738 40 - 4471408 I e cebCap1.NW_016107633v1 1599551 45 - 2680843 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=294442.000000 s hg38.chr19_GL383574v1_alt 59566 35 + 155864 CTCATAGTTAA-----CAAATTTATTGCAAATTAATTAAA s panTro5.chr19 36128194 35 + 61309027 CTCATAGTTAC-----CAAATTTATTGTAAATTAATTAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874315 35 + 64411610 CTCATAGTTAC-----CAAATTTATTGCAAATTAATTAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6291971 35 - 8369475 CTCATAGTTAC-----CAAATTTATTGCAAATTAATTAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884602 35 - 106955855 CTCATAGTTAT-----CAAATTTATTGCAAATTAATTAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196066 35 + 53671032 CTCATAGCTAT-----CAAATTTATTGCAAATTAATTAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649814 35 + 59248254 CTCATAGCTAT-----CAAATTTATTGCAAATTAATTAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516402 35 - 13342542 CTCATAGCTAT-----CAAATTTATTGCAAATTAATTAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446861 35 + 7714307 CTCATAGCTAT-----CAAATTTATTGCAAATTAATTAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254321 35 + 50890351 CTCATAGTTAT-----CAAATTTATTGCAAATTAATTAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 877709 35 - 2385121 CTCATAGCTAT-----CAAATTTATTGCAAATTAATTAAA i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548142 34 + 49145316 CTTATAGTTAA-----CAGATTTATTGCAAATTAATT-AA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391799 34 + 8899380 CTTATAGTTAA-----CAAATTTATTGCAAATTAATT-AA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599596 34 - 2680843 CTTATAGTTAA-----CAAATTTATTGCAAATTAATT-AA i cebCap1.NW_016107633v1 I 45 C 0 s aotNan1.NW_018505377v1 350778 34 - 4471408 CTTATAGTTAA-----CAAATTTATTGCAAATTAATT-AA i aotNan1.NW_018505377v1 I 40 C 0 s otoGar3.GL873654 5464214 36 + 5549422 CTCATATTAATTCTCATAAATTTATTGCCCCTTCAA---- i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 307990 30 + 643850 CTTATATTCAT-----CATATTTGCTGCATTTTCA----- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e mm10.chr7 111078913 534 - 145441459 I e canFam3.chr1 4601729 325 - 122678785 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=20864.000000 s hg38.chr19_GL383574v1_alt 59601 2 + 155864 AA s panTro5.chr19 36128229 2 + 61309027 AA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874350 2 + 64411610 AA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292006 2 - 8369475 AA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884637 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196101 2 + 53671032 AA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649849 2 + 59248254 AA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516437 2 - 13342542 AA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446896 2 + 7714307 AA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254356 2 + 50890351 AA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 877744 2 - 2385121 AA i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548176 2 + 49145316 AA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391833 2 + 8899380 AA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599630 2 - 2680843 AA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350812 2 - 4471408 AA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4602054 2 - 122678785 AA i canFam3.chr1 I 325 C 0 s dasNov3.JH563638 308020 1 + 643850 -G i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3947934 152 - 30143674 I e otoGar3.GL873654 5464250 0 + 5549422 C e mm10.chr7 111078913 534 - 145441459 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=554448.000000 s hg38.chr19_GL383574v1_alt 59603 49 + 155864 TCAATGCAAATA----GAATAGTAGGAGAACTTAGTAAAACA----GTT-TATCTTTA------ s panTro5.chr19 36128231 49 + 61309027 TCAATGCAAATA----GAATAGTAGGAGAACTTAGTAAAACA----GAT-TATCTTTA------ i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874352 49 + 64411610 TCAATGCAAATA----GAATAGTAGGAGAACTTAGTAAAACA----GAT-TATCTTTA------ i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292008 49 - 8369475 TCAATGCAAATA----GAATAGTAGGAGAACTTAGTAAAACA----GAT-TATCTTTA------ i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884639 49 - 106955855 TCAATGCAAGTA----GAATAGTAGGAGAACTTAGTAAAACA----GAT-TATCTTTA------ i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196103 49 + 53671032 TCAATGCAAATA----GAATAGTAGGAGAACTTAGTAAAACA----GAT-TAGCTTTA------ i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649851 49 + 59248254 TCAATGCAAATA----GAATAGTAGGAGAACTTAGTAAAACA----GAT-TAGCTTTA------ i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516439 49 - 13342542 TCAATGCAAATA----GAATAGTAGGAGAACTTAGTAAAACA----GAT-TAGCTTTA------ i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446898 49 + 7714307 TCAATGCAAATA----GAATAGTAGGAGAACTTAGTAAAACA----GAT-TAGCTTTA------ i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254358 49 + 50890351 TCAATGCAAATA----GAATAGCAGGAGAACTTAGTAAAACA----GAT-TAGCTTTA------ i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 877746 49 - 2385121 TCGATGCAAATA----GAATAGTAGGAGAACTTAGTAAAACA----GAT-TAGCTTTA------ i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548178 53 + 49145316 TCAATGCAAATGGAATGAATAGTAAGAGAACTTAGTAAAATA----GAT-TATCTTTA------ i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391835 41 + 8899380 TCAATGCAAATG----GAATAGTAAGAGAACTTAGTAAAACA-------------TTG------ i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599632 49 - 2680843 TCAATGCAAATG----GAATAGTAAGAGAACTTAGTAAAATA----GAT-TATTTTTA------ i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350814 48 - 4471408 TCAATGCAAAT-----GAATAGTAAGAGAACTTAGTGCAATA----GAT-TATCTTTA------ i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3948086 53 - 30143674 TCAATGCAAATG----GAATGGTAGGAGAACTTAATAAAACAGAAAGAT-TATCTTAA------ i micMur3.chr22 I 152 C 0 s otoGar3.GL873654 5464250 53 + 5549422 TCAATACAAATG----GAATAGTAGGAGAACTTAATAAAACAGAAAGAT-TATCTTAA------ i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4602056 50 - 122678785 TAAATCTAAATG----GAATTGTAGCAGAACTTAATAAAAGA----TACACAGACCTA------ i canFam3.chr1 C 0 I 4 s dasNov3.JH563638 308021 52 + 643850 TCAATCCAAATG----GAATAGTGAGAGAACT---TTAAACA----GAT-TAAATTTATCTTAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e mm10.chr7 111078913 534 - 145441459 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=214520.000000 s hg38.chr19_GL383574v1_alt 59652 19 + 155864 AAATAAACATGGAAGTGTG s panTro5.chr19 36128280 19 + 61309027 AAATAAACATGGAAGTGTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874401 19 + 64411610 AAATAAACATGGAAGTGTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292057 19 - 8369475 AAATAAACATGGAAGTGTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884688 19 - 106955855 AAATAAACATGGAAGTGTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196152 19 + 53671032 AAATAAACATAGAAGTGTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649900 19 + 59248254 AAATAAACATAGAAGTGTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516488 19 - 13342542 AAATAAACATAGAAGTGTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446947 19 + 7714307 AAATAAACATAGAAGTGTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254407 19 + 50890351 AAATAAACATAGAAGTGTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 877795 19 - 2385121 AAATAAACATAGAAGTGTG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548231 18 + 49145316 AAACAAACATGGAAG-ATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391876 18 + 8899380 AAACAAACATGGAAG-GTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599681 18 - 2680843 AAACAAACATGGAAG-GTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350862 18 - 4471408 AAACAAACATGGAAG-GTA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3948139 19 - 30143674 AAATAAATATGGAAGTATA i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5464303 19 + 5549422 AATTCAACTTGGAgctcaa i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111079447 19 - 145441459 AAATAAACCTGGACATATG i mm10.chr7 I 534 C 0 s canFam3.chr1 4602110 19 - 122678785 AAAAAAACATGGACGTATA i canFam3.chr1 I 4 C 0 s dasNov3.JH563638 308073 19 + 643850 AAATAAACATGTAAGTATG i dasNov3.JH563638 C 0 I 108 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=47183.000000 s hg38.chr19_GL383574v1_alt 59671 4 + 155864 GCTG s panTro5.chr19 36128299 4 + 61309027 GCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874420 4 + 64411610 GCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292076 4 - 8369475 GCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884707 4 - 106955855 GCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196171 4 + 53671032 GCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649919 4 + 59248254 GCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516507 4 - 13342542 GCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446966 4 + 7714307 GCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254426 4 + 50890351 GCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 877814 4 - 2385121 GCTG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548249 4 + 49145316 GCTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391894 4 + 8899380 GCTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599699 4 - 2680843 GATG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350880 4 - 4471408 GCTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3948158 4 - 30143674 GCTG i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5464322 4 + 5549422 gctg i otoGar3.GL873654 C 0 I 1974 s mm10.chr7 111079466 4 - 145441459 TCAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4602129 4 - 122678785 GACA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 308200 4 + 643850 ACTA i dasNov3.JH563638 I 108 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=127017.000000 s hg38.chr19_GL383574v1_alt 59675 9 + 155864 GACATATTT s panTro5.chr19 36128303 9 + 61309027 GTCATATTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874424 9 + 64411610 GACATATTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292080 9 - 8369475 GACATATTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884711 9 - 106955855 GACATATTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196175 9 + 53671032 GACATATTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649923 9 + 59248254 GACATATTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516511 9 - 13342542 GACATATTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446970 9 + 7714307 GACATATTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254430 9 + 50890351 GACATATTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 877818 9 - 2385121 GACATATTT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548253 9 + 49145316 GACATATTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391898 9 + 8899380 GACATATTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599703 9 - 2680843 GACATATTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350884 9 - 4471408 GACATATTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3948162 9 - 30143674 GACATATAT i micMur3.chr22 C 0 C 0 s mm10.chr7 111079470 9 - 145441459 AACATACTT i mm10.chr7 C 0 C 0 s canFam3.chr1 4602133 9 - 122678785 GACattttt i canFam3.chr1 C 0 I 600 s dasNov3.JH563638 308204 9 + 643850 GACATATTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e otoGar3.GL873654 5464326 1974 + 5549422 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=81430.000000 s hg38.chr19_GL383574v1_alt 59684 6 + 155864 GAAAAA s panTro5.chr19 36128312 6 + 61309027 GAAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874433 6 + 64411610 GAAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292089 6 - 8369475 GAAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884720 6 - 106955855 GAAAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196184 6 + 53671032 GAAAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649932 6 + 59248254 GAAAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516520 6 - 13342542 GAAAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446979 6 + 7714307 GAAAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254439 6 + 50890351 GAAAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 877827 6 - 2385121 GAAAAA i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548262 6 + 49145316 GAAAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391907 6 + 8899380 GAAAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599712 6 - 2680843 GAAAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350893 6 - 4471408 GAAAAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3948171 6 - 30143674 GAAAAA i micMur3.chr22 C 0 I 187 s mm10.chr7 111079479 6 - 145441459 GAAAAA i mm10.chr7 C 0 C 0 s dasNov3.JH563638 308213 6 + 643850 GAAAAC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e otoGar3.GL873654 5464326 1974 + 5549422 I e canFam3.chr1 4602142 600 - 122678785 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=117141.000000 s hg38.chr19_GL383574v1_alt 59690 10 + 155864 TAAAAGTAAT s panTro5.chr19 36128318 10 + 61309027 TAAAAGTAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874439 10 + 64411610 TAAAAGTAAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292095 10 - 8369475 TAAAAGTAAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884726 10 - 106955855 TAAAAGTAAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196190 10 + 53671032 TAAAAGTAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649938 10 + 59248254 TAAAAGTAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516526 10 - 13342542 TAAAAGTAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446985 10 + 7714307 TAAAAGTAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254445 10 + 50890351 TAAAAGTAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 877833 10 - 2385121 TAAAAGTAAT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548268 10 + 49145316 TAAAAATAGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5391913 10 + 8899380 TAAAAGTAAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1599718 10 - 2680843 TAAAAGTAAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 350899 10 - 4471408 TAAAAGTAAT i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111079485 10 - 145441459 TAAAAATAAC i mm10.chr7 C 0 C 0 s dasNov3.JH563638 308219 10 + 643850 TAAAAGTAAT i dasNov3.JH563638 C 0 I 26 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3948177 187 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I e canFam3.chr1 4602142 600 - 122678785 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=1810632.000000 s hg38.chr19_GL383574v1_alt 59700 225 + 155864 GGGTTTACTGACATGAT---AATAAAATGTAGCAATGCAGG----AAAAAAGA-AAGAGATGAATAGAAAGCAATAGGCAGGCAGAAACAGATCCGAGTATAAATAAGAATTTATCctgggtgcagtggttcatgcctgaaaccctaacattttgcgagttcaagatg------------gaagccagggatttgagactagcctgggcaa--------------------cataccaggaccctgtctctaaaaaaattaaaaa s panTro5.chr19 36128328 225 + 61309027 GGGTTTACTGACATGAT---AATAAAATGTAGCAATGCAGG----AAAAAAGA-AAGAGATGAATAGAAAGCAATAGGCAGGCAGAAACAGATCCGAGTATAAATAAGAATTTATCctgggtgcagtggttcatgcctgaaaccctaacattttgcgagttcaagatg------------gaagccagggatttgagactagcctgggcaa--------------------cataccaggaccctgtctctaaaaaaattaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874449 225 + 64411610 GGGTTTACTGACATGAT---AATAAAATGTAGCAATGCAGG----AAAAAAGA-AAGAGATGAATAGAAAGCAATAGGCAGGCAGAAACAGATCCGAGTATAAATAAGAATTTATCctgggtgcagtggttcatgcctgaaaccctaacattttgcgagttcaagatg------------gaagccagggatttgagactagcctgggcaa--------------------cataccaggaccctgtctctaaaaaaattaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292105 225 - 8369475 GGGTTTACTGACATGAT---AATAAAATGTAGCAATGCAGG----AAAAAAGA-AAGAGATGAATAGAAAGCAATAGGCAGGCAGAAACAGATCCGAGTATAAATAAGAATTTATCctgggtgcagtggttcatgcctgaaaccctaacattttgcgagttcaagata------------gaagccagggatttgagactagcctgggcaa--------------------cataccaggaccctgtctctaaaaaaattaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884736 226 - 106955855 GGGTTTACTGACATGAt---aataaaatgtagcaatgcagg----aaaaaaaataagagatgaatagaatgcaataggcagtcagaaacagatccgagtataagtaataatttattctgggtgcagtggttcatgcctgaaaccctaatattttgtgagttcaagaca------------gaagccagggatttgagactagcctgggcaa--------------------catagcaggaccctgtctctaaaaacgttaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196200 228 + 53671032 GGGCTTACTGACATGAT---AATAAAATGTAGCAATGCAGT-AAAAAAAAAAA-ATAAGATGAATAGAATGCAATAGGCAGTCAGAAACAGATCCAAGTATAAATACAAATTTATCctgggtgcagtggttcatgcctaaaaccccaccattttgtgaggtcaagata------------gaagctaggaatttgagactagcctgggcaa--------------------catagcaagaccctgtctctcaaaaaataaaaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34649948 227 + 59248254 GGGCTTACTGACATGAT---AATAAAATGTAGCAATGCAGT--AAAAAAAAAA-ATAAGATGAATAGAATGCAATAGGCAGTCAGAAACAGATCCAAGTATAAATACAAATTTATCctgggtgcagtggttcatgcctaaaaccccaccattttgtgaggtcaagata------------gaagctaggaatttgagactagcctgggcaa--------------------catagcaagaccctgtctctcaaaaaataaaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516536 229 - 13342542 GGGCTTACTGACATGAT---AATAAAATGTAGCAATGCAGTAAAAAAAAAAAA-ATAAGATGAATAGAATGCAATAGGCAGTCAGAAACAGATCCAAGTATAAATACAAATTTATCctgggtgcagtggttcatgcctaaaaccccaccattttgtgaggtcaagata------------gaagctaggaatttgagactagcctgggcaa--------------------catagcaagaccctgtctctcaaaaaataaaaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5446995 226 + 7714307 GGGCTTACTGACATGAT---AATAAAATGTAGCAATGCAGT---AAAAAAAAA-ATAAGATGAATAGAATGCAATAGGCAGTCAGAAACAGATCCAAGTATAAATACAAATTTATCctgggtgcagtggttcatgcctaaaaccccaccattttgtgaggtcaagata------------gaagctaggaatttgagactagcctgggcag--------------------catagcaagaccctgtctctcaaaaaataaaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254455 225 + 50890351 GGGCTTACTGACATGAT---AATTAAATGTAGCATTGCAGT----AAAAAAAA-ATAAGATGAATAGAATGCAATAGGCAGTCAGAAACAGATCCAAGTATAAATACAAATTTATCctgggtgcagtggttcatgcctaaaaccccaccattttgtgaggtcaagata------------gaggctaggaatttgagactagcctgggcaa--------------------catagcaagagcctgtctctcaaaaaataaaaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 877843 225 - 2385121 GGGCTTACTGACATGAT---AATAAAATGTAGCAATGCAGT----AAAAAAAA-ATAAGATGAATAGAATGCAATAGGCAGTCAGAAACAGATCCAAGTATAAATACAAATTTATCctgggtgcagtggttcatgcctaaaacctcaccattttgtgaggtcaagata------------gaagctaggaatttgagactagcctgggcaa--------------------catagcaagaccctgtctctcaaaaaataaaaaa i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548278 230 + 49145316 GGGCTTACTGGCTTGAT---AATGAAATGTAGTAATGCAGT----ACATAAAATAAGAGATGAACAGAAGGCAATAGGCAGTCTGAAA-AGATCCAAGTATAAATAAGAATTTATCctgggtacagtga-------ctataaccccaacattttgcaaggtcaaggtagaaggatcacttgaagccaggagtttgagactagcttgggcaa--------------------catagcaagaccctgtctctaaaaaagtaaaaaa i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5391923 237 + 8899380 GGGCTTACTGACTTGAT---AATAAAATGTAGTAATGCAGT----ATATAAAATAAGAGATGAATAGAAGGCAGTAAGCAGTCTGAAA-AAATCCAAGTGTAAATAAGAATTTGTCctgggtacagtgactcatgcctataaccccaacattttgcaaggtcaagataggaggatcacttgaagccaggagtttgagactagcttgggcaa--------------------catagcaagatcctgtctctaaaaaagcaaaaaa i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107633v1 1599728 237 - 2680843 GGGCTTACTGACTTGAT---AATAAAATGTAGTAATGCAGT----AAATAAAATAAGAGATGAATAGAAGGCAATAGGCAGTCTGAAA-AGATCCAAGTATAAATAAGAATTTATCctgggtacagtgactcatgcctataaccccaacattttgcaaggtcaagataggaggatcacttgaagccaggagtttgagactaacttgggcaa--------------------catagcaagaccctgtctctaaaaaagtaaaaaa i cebCap1.NW_016107633v1 C 0 I 40 s aotNan1.NW_018505377v1 350909 237 - 4471408 GGGCTTACTGACTTGAT---AATAAAATGTAGTAATGCAGT----AAATAAAATAAGAGATGAATAGAAGGCAATAGGCAGTCTGAAA-AGATCCAAGTATAAATAAGAATTTATCctgggtacagtgactcaagcctataaccccaacattttgcaaggtcaagataggaggatcacttgaagccaggagtttgagactagcttgggcaa--------------------catagcaagaccctgtctttaaaaaagtaaaaaa i aotNan1.NW_018505377v1 C 0 I 1 s mm10.chr7 111079495 208 - 145441459 AAGATTACCTACTTGGTGTAATTAAACTGTAAGAATTAATT-------------TAGAGATGACTAAAA--------------------------------AAGTACAGTGCTGgccaggcagtggtggcgtacacctgtaatcccagcacttgg-gaggcagagacaggt---------ggatttctgagttcaagaccagcctggtctacagcgtgagttccaggactgcacagagaaaccctgtctc--aaaaaaccaaaaA i mm10.chr7 C 0 I 478 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3948177 187 - 30143674 I e dasNov3.JH563638 308229 26 + 643850 I e otoGar3.GL873654 5464326 1974 + 5549422 I e canFam3.chr1 4602142 600 - 122678785 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=189967.000000 s hg38.chr19_GL383574v1_alt 59925 30 + 155864 ttagttgggcgtgat-gtgtgcgccta-----tcag s panTro5.chr19 36128553 30 + 61309027 ttagctgggcgtgat-gtgtgcgccta-----tcag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874674 30 + 64411610 ttagctgggcgtgat-gtgtgcgccta-----tcag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292330 30 - 8369475 ttagctgggcgtgat-gtgtgcgccta-----tcag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884962 30 - 106955855 ttagctgggcatgat-gtgtgcgccta-----tcag i nomLeu3.chr10 C 0 I 3 s rheMac8.chr19 30196428 31 + 53671032 ttaactgggtgtgatggggtgcgccta-----tcag i rheMac8.chr19 C 0 I 3 s macFas5.chr19 34650175 31 + 59248254 ttaactgggtgtgatggggtgcgccta-----tcag i macFas5.chr19 C 0 I 3 s macNem1.NW_012011689v1 4516765 31 - 13342542 ttaactgggtgtgatggggtgcgccta-----tcag i macNem1.NW_012011689v1 C 0 I 3 s cerAty1.NW_012005268v1 5447221 31 + 7714307 ttaactgggtgtgatggggtgcgccta-----tcag i cerAty1.NW_012005268v1 C 0 I 3 s chlSab2.chr6 29254680 31 + 50890351 ttaactgggtgtgatggtgtgcgccta-----tcag i chlSab2.chr6 C 0 I 3 s manLeu1.NW_012102454v1 878068 31 - 2385121 ttaactgggtgtgatggggtgcgccta-----tcag i manLeu1.NW_012102454v1 C 0 I 3 s calJac3.chr22 28548509 36 + 49145316 ttagctgggcatgatggtgtgtacctatagtctcag i calJac3.chr22 I 1 I 3 s saiBol1.JH378197 5392161 36 + 8899380 ttagcttggcgtgatggtgtgtacctatagtctcag i saiBol1.JH378197 I 1 I 3 s aotNan1.NW_018505377v1 351147 36 - 4471408 ttagctgggcgtgatggtgtgtacctgtagtctcag i aotNan1.NW_018505377v1 I 1 I 3 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3948177 187 - 30143674 I e dasNov3.JH563638 308229 26 + 643850 I e otoGar3.GL873654 5464326 1974 + 5549422 I e mm10.chr7 111079703 478 - 145441459 I e canFam3.chr1 4602142 600 - 122678785 I e cebCap1.NW_016107633v1 1599965 40 - 2680843 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=637174.000000 s hg38.chr19_GL383574v1_alt 59955 80 + 155864 cttgagaggctgaagctagag----gattgcttgagcccaggaggttaaggtggcagcaagctgtgattgcggccctgcacact s panTro5.chr19 36128583 80 + 61309027 cttgagaggctgaagctagag----gattgcttgagcccaggaggtcaaggtggcagcaagctgtgattgcggccctgcacact i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874704 80 + 64411610 cttgagaggctgaagctagag----gattgcttgagcccaggaggtcaaggtggcagcaagctgtgattgcggccctgcacact i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292360 80 - 8369475 cttcagaggctgaagctagag----gattgcttgagcccaggaggtcaaggtggcagcaagctgtgattgcggccctgcacact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63884995 80 - 106955855 cttgagaggctgaagctagag----gattgtttgagcccaggaggtcaaggtggcagcaagctgtgattgcggccttgcacact i nomLeu3.chr10 I 3 C 0 s rheMac8.chr19 30196462 84 + 53671032 atcgagaggtgaaagctagaggattgattgcttgagcccaggagatcaaggtggcagcaagctgtgattgcagcactgcacact i rheMac8.chr19 I 3 C 0 s macFas5.chr19 34650209 84 + 59248254 atcgagaggtgaaagctagaggattgattgcttgagcccaggagatcaaggtggcagcaagctgtgattgcagcactgcacact i macFas5.chr19 I 3 C 0 s macNem1.NW_012011689v1 4516799 80 - 13342542 atcgagaggtgaaagctagag----gattgcttgagcccaggaaatcaaggtggcagcaagctgtgattgcagcactgcacact i macNem1.NW_012011689v1 I 3 C 0 s cerAty1.NW_012005268v1 5447255 80 + 7714307 atcgagaggtgaaagctagag----gattgcttgagcccaggagatccaggtggcagcaagctgtgattgcagcactgcacact i cerAty1.NW_012005268v1 I 3 C 0 s chlSab2.chr6 29254714 80 + 50890351 atcgagaggtgaaagctagag----gattgcttgagcccaggagatcaaggtggcagcaagctgtgattgcagcactgcacact i chlSab2.chr6 I 3 C 0 s manLeu1.NW_012102454v1 878102 80 - 2385121 atcgagaggtgaaagctagag----gattgcttgagcccaggagatcaaggtggcagcaagctgtgattgcagcactgcacact i manLeu1.NW_012102454v1 I 3 C 0 s calJac3.chr22 28548548 80 + 49145316 ctcaagaggctgaggctagag----tattgcttgagcccgggcattcaaggcagcagcaagcagtgatcgcaggactgcacact i calJac3.chr22 I 3 C 0 s saiBol1.JH378197 5392200 80 + 8899380 ctcaagaggctgaggccagag----gattgcttgagcccaggagttcaaggcagcagcaagcagcgatcgcagaactatacact i saiBol1.JH378197 I 3 C 0 s cebCap1.NW_016107633v1 1600005 80 - 2680843 ctcaagaagctgaggctagag----gattgcttgaccccgggagctcaaggcagcagcaagcagtgatcgcaggactgcacact i cebCap1.NW_016107633v1 I 40 C 0 s aotNan1.NW_018505377v1 351186 80 - 4471408 ctcaagaggctgaggctagag----gattgcttgagcccaggagttcaaggcagcagcaagcagtgatcgcaggactgcacact i aotNan1.NW_018505377v1 I 3 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3948177 187 - 30143674 I e dasNov3.JH563638 308229 26 + 643850 I e otoGar3.GL873654 5464326 1974 + 5549422 I e mm10.chr7 111079703 478 - 145441459 I e canFam3.chr1 4602142 600 - 122678785 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=517935.000000 s hg38.chr19_GL383574v1_alt 60035 65 + 155864 agcctaggcaac-agagcaagaattcatcttaaa-----------------agaaTTTAGTAGATGATAAAGGTAT-TA-TTTTA s panTro5.chr19 36128663 65 + 61309027 agcctaggcaac-agagcaagaattcatcttaaa-----------------agaaTTTAGTAGATGATAAAGGTAT-TA-TTTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874784 65 + 64411610 agcctaggcaac-agagcaagaattcatcttaaa-----------------agaaTTTAGTAGATGATAAAGGTAT-TA-TTTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292440 82 - 8369475 agcctaggcaac-agagcaagaattcatcttaaaaGATGAATTCTTTTAGTAGAATTTAGTAGATGATAAAGGTAT-TA-TTTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885075 65 - 106955855 agcctaggcaac-agagcaagacttcatcttaaa-----------------agaatttagtagatgataaaggtat-ta-tttta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196546 65 + 53671032 agcctaagcaac-agagcaagacttcgtcttaaa-----------------aTAATTTAATAGATGATAAAGGTAT-TA-TTTTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34650293 65 + 59248254 agcctaagcaac-agagcaagacttcgtcttaaa-----------------aTAATTTAATAGATGATAAAGGTAT-TA-TTTTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516879 65 - 13342542 agcctaagcaac-agagcaagacttcgtcttaaa-----------------aTAATTTAATAGATGATAAAGGTAT-TA-TTTTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5447335 65 + 7714307 agcctaagcaac-agagcaagacttcgtcttaaa-----------------aTAATTTAATAGATGATAAAGGTAT-TA-TTTTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254794 65 + 50890351 agcctaagcaac-agagcaagacttcgtcttaaa-----------------aTAATTTAATAGATGATAAAGGTAT-TA-TTTTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 878182 65 - 2385121 agcctaagcaac-agagcaagacttcgtcttaaa-----------------aTAATTTAACAGATGATAAAGGTAT-TA-TTTTA i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548628 67 + 49145316 agcctaggcaactagagcaagacctcgttttgaa-----------------agaaTTTAGTAGATGATATAGGTAT-TATTTTTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5392280 66 + 8899380 agcctaggcaac-agagcaagacctcattttgaa-----------------agaaTTTAGTAGATGATATAGGTAT-TATTTTTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1600085 65 - 2680843 agcctaggcaac-agagcaagagctcgttttg-a-----------------agaaTTTAGTAGATGATATTGGCAT-TATTTTTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 351266 66 - 4471408 agcctaggcaac-agagcaagacctcgttttgaa-----------------aGGATTTAGTAGATGATATAGGTAT-TATTTTTA i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111080181 62 - 145441459 agccaaggctac-aaggagaaactcaaacaaaac-----------------aaaacaaaacaaa----aAAGATTTCTA-GATTA i mm10.chr7 I 478 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3948177 187 - 30143674 I e dasNov3.JH563638 308229 26 + 643850 I e otoGar3.GL873654 5464326 1974 + 5549422 I e canFam3.chr1 4602142 600 - 122678785 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=283188.000000 s hg38.chr19_GL383574v1_alt 60100 28 + 155864 AAT--TAGTGGAGAGAAGGCTGTCTGTTCC s panTro5.chr19 36128728 28 + 61309027 AAT--TAGTGGAGAGAAGGCTGTCTGTTCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874849 28 + 64411610 AAT--TAGTGGAGAGAAGGCTGTCTGTTCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292522 28 - 8369475 AAT--TAGTGGAGAGAAGGCTGTCTGTTCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885140 28 - 106955855 aat--tagtggagagaaggctgtctgttcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196611 28 + 53671032 AAT--TAGTGGAGACAAGACTGTCTGTTCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34650358 28 + 59248254 AAT--TAGTGGAGACAAGACTGTCTGTTCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516944 28 - 13342542 AAT--TAGTGGAGACAAGACTGTCTGTTCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5447400 28 + 7714307 AAT--TAGTGGAGATAAGACTGTCTGTTCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254859 28 + 50890351 AAT--TAGTGGAGACAAGACTGTCTGTTCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 878247 28 - 2385121 AAT--TAGTGGAGACAAGACTGTCTGTTCC i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548695 28 + 49145316 AAT--TAGTGGAGAGAAAGCTGGCTGTTCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5392346 28 + 8899380 AAT--TAGTGGAGAGAAGGCTGGCTGTTCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1600150 28 - 2680843 AAT--TAGTGGAGAGAAAGCTGGCTGTTCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 351332 28 - 4471408 AAT--TAGTGGAGAGAAAGCTGGCTGTTCC i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111080243 29 - 145441459 AATTGTAGTGGAGA-AAGGTTGGTTATTTC i mm10.chr7 C 0 I 1 s dasNov3.JH563638 308255 27 + 643850 AAT--CAGTGGAGA-AAGGCTGGCTATTAC i dasNov3.JH563638 I 26 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3948177 187 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I e canFam3.chr1 4602142 600 - 122678785 I e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=9555.000000 s hg38.chr19_GL383574v1_alt 60128 1 + 155864 A s panTro5.chr19 36128756 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874877 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292550 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885168 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196639 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34650386 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516972 1 - 13342542 A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5447428 1 + 7714307 A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254887 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 878275 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548723 1 + 49145316 A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5392374 1 + 8899380 A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1600178 1 - 2680843 A i cebCap1.NW_016107633v1 C 0 C 0 s dasNov3.JH563638 308282 1 + 643850 A i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3948177 187 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I e mm10.chr7 111080272 1 - 145441459 I e canFam3.chr1 4602142 600 - 122678785 I e aotNan1.NW_018505377v1 351360 0 - 4471408 C e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=69020.000000 s hg38.chr19_GL383574v1_alt 60129 15 + 155864 ATTAATAATGTTGCC--------- s panTro5.chr19 36128757 15 + 61309027 ATTAATAATGTTGCC--------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874878 15 + 64411610 ATTAATAATGTTGCC--------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292551 15 - 8369475 ATTAATAATGTTGCC--------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885169 15 - 106955855 attaataatgttgcc--------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196640 15 + 53671032 ATTAATAACATTGCC--------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34650387 15 + 59248254 ATTAATAACATTGCC--------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516973 15 - 13342542 ATTAATAACATTGCC--------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5447429 15 + 7714307 ATTAATAACATTGCC--------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254888 15 + 50890351 ATTAATAACATTGCC--------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 878276 15 - 2385121 ATTAATAACATTGCC--------- i manLeu1.NW_012102454v1 C 0 C 0 s mm10.chr7 111080273 15 - 145441459 ATAAGTGACGGTGTG--------- i mm10.chr7 I 1 C 0 s dasNov3.JH563638 308283 24 + 643850 ATGAATTATGTTGGAACAGACAAC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3948177 187 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I e canFam3.chr1 4602142 600 - 122678785 I e aotNan1.NW_018505377v1 351360 0 - 4471408 C e cebCap1.NW_016107633v1 1600179 0 - 2680843 C e saiBol1.JH378197 5392375 0 + 8899380 C e calJac3.chr22 28548724 0 + 49145316 C e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=41585.000000 s hg38.chr19_GL383574v1_alt 60144 7 + 155864 ---TGATCAT s panTro5.chr19 36128772 7 + 61309027 ---TGATCAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874893 7 + 64411610 ---TGATCAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292566 7 - 8369475 ---TGATCAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885184 7 - 106955855 ---tgatcat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196655 7 + 53671032 ---TGATCAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34650402 7 + 59248254 ---TGATCAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516988 7 - 13342542 ---TGATCAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5447444 7 + 7714307 ---TGATCAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254903 7 + 50890351 ---TGATCAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 878291 7 - 2385121 ---TGATCAT i manLeu1.NW_012102454v1 C 0 C 0 s micMur3.chr22 3948364 7 - 30143674 ---TGATCAT i micMur3.chr22 I 187 C 0 s mm10.chr7 111080288 7 - 145441459 ---TTATAGT i mm10.chr7 C 0 C 0 s dasNov3.JH563638 308307 7 + 643850 GGTTGAT--- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e otoGar3.GL873654 5464326 1974 + 5549422 I e canFam3.chr1 4602142 600 - 122678785 I e aotNan1.NW_018505377v1 351360 0 - 4471408 C e cebCap1.NW_016107633v1 1600179 0 - 2680843 C e saiBol1.JH378197 5392375 0 + 8899380 C e calJac3.chr22 28548724 0 + 49145316 C e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=460384.000000 s hg38.chr19_GL383574v1_alt 60151 75 + 155864 -TTGGAGAAAGTCACTCTAGATTCTTTCCCTCATACTGAGCACC-AAAAAATATATAAATTTTAAATAGATT-AAAAT s panTro5.chr19 36128779 75 + 61309027 -TTGGAGAAAGTCACTCTAGATTCTTTCCCTCATACTGAGCACC-AAAAAATATATAAATTTTAAATAGATT-AAAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874900 75 + 64411610 -TTGGAGAAAGTCACTCTAGATTCTTTCCCTCATACTGAGCACC-AAAAAATATATAAATTTTAAATAGATT-AAAAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292573 75 - 8369475 -TTGGAGAAAGTCACTCTAGATTCTTTCCCTCATACTAAGCACC-AAAAAATATATAAATTTTAAATAGATT-AAAAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885191 75 - 106955855 -ttggagaaagtcactctagattctttccctcatactgagcacc-aaaaaatatataaattttaaatagatt-aaaat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196662 75 + 53671032 -TTGGAGAAAGTCACTCTAGATTCTTTCCCTCATACTGAGCACC-AAAAAATATATAAATAGTAAATAGATT-AAAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34650409 75 + 59248254 -TTGGAGAAAGTCACTCTAGATTCTTTCCCTCATACTGAGCACC-AAAAAATATATAAATAGTAAATAGATT-AAAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4516995 75 - 13342542 -TTGGAGAAAGTCACTCTAGATTCTTTCCCTCATACTGAGCACC-AAAAAATATATAAATAGTAAATAGATT-AAAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5447451 75 + 7714307 -TTGGAGAAAGTCACTCTAGATTCTTTCCCTCATACTGAGCACC-AAAAAATATATAAATAGTAAATAGATT-AAAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254910 75 + 50890351 -TTGGAGAAAGTCACTGTAGATTCTTTCCCTCATACTGAGCACC-AAAAAATATATGAATAGTAAATAGATT-AAAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 878298 75 - 2385121 -TTGGAGAAAGTCACTCTAGATTCTTTCCCTCATACTGAGCACC-AAAAAATATATAAATAGTAAATAGATT-AAAAT i manLeu1.NW_012102454v1 C 0 C 0 s saiBol1.JH378197 5392375 18 + 8899380 -------------------------------------------------AGTATATG---------TTTATT-AAAA- i saiBol1.JH378197 C 0 C 0 s micMur3.chr22 3948371 76 - 30143674 -TTAGAAAAAATAACTCTAGATTCCTTACCTCATATTGAACACTAAAAAAATAAATACATTTTAAATAGATT-AAAAT i micMur3.chr22 C 0 I 397 s mm10.chr7 111080295 70 - 145441459 -TTAATAAAAGTAAGGCTGAGTTCCTTCATTCATACTGAAGCCT-TGAAAACAGAAGTGTTTTTATTAAATT------ i mm10.chr7 C 0 C 0 s canFam3.chr1 4602742 70 - 122678785 -ttggGAAAAGTAGATCTAGATTCTTTCCCTCATACTTAGGACt-aaaatata------ttttaaatagatttaaaat i canFam3.chr1 I 600 I 43 s dasNov3.JH563638 308314 69 + 643850 CGGGGGGGAAATAACT-TGATTTTTTTCCCTTGTACTAAACATT-AGAATGTA------TTTTAAATATGTT-AGAAT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e otoGar3.GL873654 5464326 1974 + 5549422 I e aotNan1.NW_018505377v1 351360 0 - 4471408 C e cebCap1.NW_016107633v1 1600179 0 - 2680843 C e calJac3.chr22 28548724 0 + 49145316 C e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=59322.000000 s hg38.chr19_GL383574v1_alt 60226 13 + 155864 GTTAAAAATTTTG s panTro5.chr19 36128854 13 + 61309027 GTTAAAAATTTTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874975 13 + 64411610 GTTAAAAATTTTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292648 13 - 8369475 GTTAAAAATTTTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885266 13 - 106955855 gttaaaaatTTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196737 13 + 53671032 GTTAAAAACTTTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34650484 13 + 59248254 GTTAAAAACTTTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4517070 13 - 13342542 GTTAAAAACATTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5447526 13 + 7714307 GTTAAAAACTTTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254985 13 + 50890351 GTTAAAAACTTTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 878373 13 - 2385121 GTTAAAAACTTTG i manLeu1.NW_012102454v1 C 0 C 0 s canFam3.chr1 4602855 13 - 122678785 gtgtaAAATTTTT i canFam3.chr1 I 43 I 1 s dasNov3.JH563638 308383 11 + 643850 GTTGTTTTTTT-- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3948447 397 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I e mm10.chr7 111080365 0 - 145441459 C e aotNan1.NW_018505377v1 351360 0 - 4471408 C e cebCap1.NW_016107633v1 1600179 0 - 2680843 C e saiBol1.JH378197 5392393 0 + 8899380 C e calJac3.chr22 28548724 0 + 49145316 C e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=9555.000000 s hg38.chr19_GL383574v1_alt 60239 1 + 155864 A s panTro5.chr19 36128867 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874988 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292661 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885279 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196750 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34650497 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4517083 1 - 13342542 A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5447539 1 + 7714307 A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254998 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 878386 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548724 1 + 49145316 A i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 351360 1 - 4471408 A i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4602869 1 - 122678785 A i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 308394 1 + 643850 A i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3948447 397 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I e mm10.chr7 111080365 0 - 145441459 C e cebCap1.NW_016107633v1 1600179 0 - 2680843 C e saiBol1.JH378197 5392393 0 + 8899380 C e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=114931.000000 s hg38.chr19_GL383574v1_alt 60240 14 + 155864 AGTATGTGTTTATT s panTro5.chr19 36128868 14 + 61309027 AGTATGTGTTTATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39874989 14 + 64411610 AGTATGTGTTTATT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292662 14 - 8369475 AGTATGTGTTTATT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885280 14 - 106955855 AGTATGTGCTTATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196751 14 + 53671032 AGTATGTGTTTATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34650498 14 + 59248254 AGTATGTGTTTATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4517084 14 - 13342542 AGTATGTGTTTATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5447540 14 + 7714307 AGTATGTGTTTATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29254999 14 + 50890351 AGTATGTGTTTATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 878387 14 - 2385121 AGTATGTGTTTATT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28548725 14 + 49145316 AGTATATGTTTATT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1600179 14 - 2680843 AGTATATGTTTATT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 351361 14 - 4471408 AGTATATGTTTATT i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111080365 6 - 145441459 --------TTGATT i mm10.chr7 C 0 C 0 s canFam3.chr1 4602870 10 - 122678785 AGTACATATT---- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 308395 10 + 643850 AGTACATATT---- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3948447 397 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I e saiBol1.JH378197 5392393 0 + 8899380 C e colAng1.NW_012111697v1 2313635 322 + 4274983 I a score=47899.000000 s hg38.chr19_GL383574v1_alt 60254 5 + 155864 AAAAG s panTro5.chr19 36128882 5 + 61309027 AAAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875003 5 + 64411610 AAAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292676 5 - 8369475 AAAAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885294 5 - 106955855 AAAAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196765 5 + 53671032 AAAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34650512 5 + 59248254 AAAAG i macFas5.chr19 C 0 I 291 s macNem1.NW_012011689v1 4517098 5 - 13342542 AAAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5447554 5 + 7714307 AAAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29255013 5 + 50890351 GAAAG i chlSab2.chr6 C 0 I 288 s manLeu1.NW_012102454v1 878401 5 - 2385121 AAAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2313957 5 + 4274983 aaaag i colAng1.NW_012111697v1 I 322 C 0 s calJac3.chr22 28548739 5 + 49145316 AAAAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5392393 1 + 8899380 ----G i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1600193 5 - 2680843 AAAAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 351375 5 - 4471408 AAAAG i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111080371 3 - 145441459 GGA-- i mm10.chr7 C 0 C 0 s canFam3.chr1 4602880 5 - 122678785 ATAAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 308405 5 + 643850 AGAAG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3948447 397 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I a score=71474.000000 s hg38.chr19_GL383574v1_alt 60259 7 + 155864 AAAGAGG s panTro5.chr19 36128887 7 + 61309027 AAAGAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875008 7 + 64411610 AAAGAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292681 7 - 8369475 AAAGAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885299 7 - 106955855 AAAGAGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30196770 7 + 53671032 AAAGAGG i rheMac8.chr19 C 0 I 327 s macFas5.chr19 34650808 7 + 59248254 aaaGAGG i macFas5.chr19 I 291 C 0 s macNem1.NW_012011689v1 4517103 7 - 13342542 AAAGAGG i macNem1.NW_012011689v1 C 0 I 327 s cerAty1.NW_012005268v1 5447559 7 + 7714307 AAAGAGG i cerAty1.NW_012005268v1 C 0 I 328 s chlSab2.chr6 29255306 7 + 50890351 aaaGAGG i chlSab2.chr6 I 288 C 0 s manLeu1.NW_012102454v1 878406 7 - 2385121 AAAGAGG i manLeu1.NW_012102454v1 C 0 I 323 s colAng1.NW_012111697v1 2313962 7 + 4274983 aaagaaG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28548744 7 + 49145316 AAGGAAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5392394 7 + 8899380 AAGGAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1600198 7 - 2680843 AAGGAAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 351380 7 - 4471408 AAGGAAG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4602885 7 - 122678785 AGAGAGG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 308410 5 + 643850 AAAGA-- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3948447 397 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I e mm10.chr7 111080374 0 - 145441459 C a score=191855.000000 s hg38.chr19_GL383574v1_alt 60266 38 + 155864 TGTATTTACATAAAGTTATGACAAATGACAAGTCCTAA- s panTro5.chr19 36128894 38 + 61309027 TGTATTTACATAAAGTTATGACAAATGACAAGTCCTAA- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875015 38 + 64411610 TGTATTTACATAAAGTTATGACAAATGACAAGTCCTAG- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292688 38 - 8369475 TGTATTTACATAAAGCTATGACAGATGACAAGTCCTAA- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885306 35 - 106955855 TGTATTTACATAAAGCTATGACAAAG---AAGTCCTAA- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34650815 35 + 59248254 TGTATTTACAAGTAGCTATAACAAAG---AAGTCCTAG- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 29255313 35 + 50890351 TGTATTTACAAGTAGCTATGACAAAG---AAGTCCTAG- i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2313969 32 + 4274983 TGTATTTACATAAAGCTATGACA------AAGTCCTAG- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28548751 35 + 49145316 TGTATTTACATAAAGCTATGACAAAG---AAGACCTAG- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5392401 35 + 8899380 TGTATTTACCTAAAACTATGACAAAG---ACGACCTAG- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1600205 35 - 2680843 TGTATTTACATAAAGCTATGACAAAG---ATGACCTAG- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 351387 35 - 4471408 TATATTTACATAAAGCTATGACAAAG---AAAACCTAA- i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111080374 33 - 145441459 --TATTTACATAAATCTGTGACACAG---AAAGCCTAA- i mm10.chr7 C 0 C 0 s canFam3.chr1 4602892 35 - 122678785 TATATTTATATAAAGCAGTGAACAAA---AAAGCCTGG- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 308415 35 + 643850 TATATTTATATAAAGTT-TGGTGGAG---ATGATCTGGA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 545986 19179 + 2501019 I e micMur3.chr22 3948447 397 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I e manLeu1.NW_012102454v1 878413 323 - 2385121 I e cerAty1.NW_012005268v1 5447566 328 + 7714307 I e macNem1.NW_012011689v1 4517110 327 - 13342542 I e rheMac8.chr19 30196777 327 + 53671032 I a score=-4122.000000 s hg38.chr19_GL383574v1_alt 60304 2 + 155864 G-A s panTro5.chr19 36128932 2 + 61309027 G-A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875053 2 + 64411610 G-A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292726 2 - 8369475 G-A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885341 2 - 106955855 G-A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34650850 1 + 59248254 G-- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 29255348 1 + 50890351 G-- i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2314001 2 + 4274983 GA- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28548786 2 + 49145316 G-A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5392436 2 + 8899380 G-A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1600240 2 - 2680843 G-A i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 351422 2 - 4471408 G-A i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 565165 2 + 2501019 G-A i proCoq1.NW_012149263v1 I 19179 C 0 s mm10.chr7 111080407 2 - 145441459 G-A i mm10.chr7 C 0 C 0 s canFam3.chr1 4602927 2 - 122678785 G-A i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 308450 2 + 643850 G-A i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3948447 397 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I e manLeu1.NW_012102454v1 878413 323 - 2385121 I e cerAty1.NW_012005268v1 5447566 328 + 7714307 I e macNem1.NW_012011689v1 4517110 327 - 13342542 I e rheMac8.chr19 30196777 327 + 53671032 I a score=380084.000000 s hg38.chr19_GL383574v1_alt 60306 28 + 155864 GTTTGCA-TTTAAGTTTTATCAACTAAAA s panTro5.chr19 36128934 28 + 61309027 GTTTGCA-TTTAAGTTTTATCAACTAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875055 28 + 64411610 GTTTGCA-TTTAAGTTTTATCAACTAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292728 28 - 8369475 GTTTGCA-TTTAAGTTTTATCAACTAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885343 28 - 106955855 GTTTGCA-TTTAAGTTTTATCAACTAAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197104 28 + 53671032 GTTTGCA-TTTAAGTTTTATCAACTAAAA i rheMac8.chr19 I 327 C 0 s macFas5.chr19 34650851 28 + 59248254 GTTTGCA-TTTAAGTTTTATCAACTAAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4517437 28 - 13342542 GTTTGCA-TTTAAGTGTTATCAACTAAAA i macNem1.NW_012011689v1 I 327 C 0 s cerAty1.NW_012005268v1 5447894 28 + 7714307 GTTTGCA-TTTAAGTTTTATCAACTAAAA i cerAty1.NW_012005268v1 I 328 C 0 s chlSab2.chr6 29255349 28 + 50890351 GTTTGCG-TTTAAGTTTTACCAACTAAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 878736 28 - 2385121 GTTTGCA-TTTAAGTTTTATCAACTAAAA i manLeu1.NW_012102454v1 I 323 C 0 s colAng1.NW_012111697v1 2314003 28 + 4274983 GTTTGCA-TTTAAGTTTTATCAGCTAAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28548788 28 + 49145316 GTTTGCA-TGTAAAATTTATCAACTAAAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5392438 28 + 8899380 GTTTGCA-TTTAAGTTTTATCAACTAAAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1600242 28 - 2680843 GTTTGCA-TTTAAATTTTATCAACTAAAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 351424 28 - 4471408 GTTTGCA-ATTAAATTTTATCAACTAAAG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 565167 28 + 2501019 GTTTGCA-TTTAAATTTCAGCAATTAAAA i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111080409 25 - 145441459 ATT---A-TTTAAATTTCACCAACTAAAA i mm10.chr7 C 0 I 298 s canFam3.chr1 4602929 28 - 122678785 CTCTACA-TTTAAGTTTTATAAATGAAAA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 308452 28 + 643850 -TCTTCATTTTAAATTTCACCAAGTAAAA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3948447 397 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I a score=381585.000000 s hg38.chr19_GL383574v1_alt 60334 31 + 155864 TTGCTGAATTTCACA------AAATTAAAATTCCTAG s panTro5.chr19 36128962 31 + 61309027 TTGCTGAATTTCACA------AAATTTAAATTCCTAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875083 31 + 64411610 TTGCTGAATTTCACA------AAATTAAAATTCCTAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292756 31 - 8369475 TTGCTGAATTTCACA------AAATTTAAATTCCTAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885371 31 - 106955855 TTTCTGAATTTCACA------AAATTAAAATTCCTAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197132 31 + 53671032 TTTCTGAATTTCACA------GAATTTAAATTCCTAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34650879 31 + 59248254 TTTCTGAATTTCACA------GAATTTAAATTCCTAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4517465 31 - 13342542 TTTCTGAATTTCACA------GAATTTAAATTCCTAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5447922 31 + 7714307 TTTCTGAATTTCACA------AAATTTAAATTCCTAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29255377 31 + 50890351 TTTCTGAATTTCACA------AAATTAAAATTCCTAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 878764 31 - 2385121 TTTCTGAATTTCACA------AAATTAAAATTCCTAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314031 30 + 4274983 TTTCTGAATTTCACA------AAATT-AAATTCCTAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28548816 31 + 49145316 TTTCTGAATTATGTG------AAATTAAAATTCCTAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5392466 31 + 8899380 TTTCTGAATTTCGTG------AAATTAAAATTCCTAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1600270 31 - 2680843 TTTCTGAATTTCATG------AAATTAAAATTCCTAG i cebCap1.NW_016107633v1 C 0 I 2957 s aotNan1.NW_018505377v1 351452 31 - 4471408 TTTCTGAATTTCGTG------AAATTAAAATTCCTAG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 565195 31 + 2501019 TTTCTAAATTTCACA------AAATTAAGAATACTCG i proCoq1.NW_012149263v1 C 0 I 1 s mm10.chr7 111080732 35 - 145441459 TTTCTGATTTTCACACCAAACACATTAGATTTCCT-- i mm10.chr7 I 298 C 0 s canFam3.chr1 4602957 30 - 122678785 CTTCTGAACTTTACA------GAATTAAAA-TACTAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 308480 31 + 643850 TTCCTGAATTTCACA------AAATTAAACCACCTAT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3948447 397 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I a score=54275.000000 s hg38.chr19_GL383574v1_alt 60365 6 + 155864 AA-----TTTT s panTro5.chr19 36128993 11 + 61309027 AATTTTCTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875114 11 + 64411610 AATTTTCTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292787 11 - 8369475 AATTTTCTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885402 11 - 106955855 AATTTTCTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197163 11 + 53671032 AATTTTCTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34650910 11 + 59248254 AATTTTCTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4517496 11 - 13342542 AATTTTCTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5447953 11 + 7714307 AATTTTCTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29255408 11 + 50890351 AATTTTCTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 878795 11 - 2385121 AATTTTCTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314061 11 + 4274983 AATTTTCTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28548847 6 + 49145316 AATTTT----- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5392497 6 + 8899380 AATTTT----- i saiBol1.JH378197 C 0 I 393 s aotNan1.NW_018505377v1 351483 6 - 4471408 AATTTT----- i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 565227 6 + 2501019 AATTTT----- i proCoq1.NW_012149263v1 I 1 C 0 s mm10.chr7 111080767 3 - 145441459 ---TTT----- i mm10.chr7 C 0 C 0 s canFam3.chr1 4602987 6 - 122678785 AATTTT----- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 308511 6 + 643850 AATTTT----- i dasNov3.JH563638 C 0 I 5 e micMur3.chr22 3948447 397 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=1488599.000000 s hg38.chr19_GL383574v1_alt 60371 142 + 155864 AA-----GTGTGA-TAAGATTGTGAAGATAGCTCAAGGGAGTGTGTCTATAATATGCAGAAATCA-CTTCTGGATTT------ATTCCTAATAATGTATCCAGTATCACAGTATCACCTGTATTTCCCTGTTTATAACAAAACTGGCATCATGAT s panTro5.chr19 36129004 142 + 61309027 AA-----GTGTGA-TAAGATTGTGAAGATAGCTCAAGGGAGTGTGTCTATAATATGCAGAAATCA-CTTCTGGATTT------ATTCCTAATAATGTATCCAGTATCACAGTATCACCTGTATTTCCCTGTTTATAACAAAACTGGCATCATGAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875125 142 + 64411610 AA-----GTGTGA-TAAGATTGTGAAGATAGCTCAAGGGAGTGTGTCTATAATATGCAGAAATCA-CTTCTGGATTT------ATTCCTAATAATGTATCCAGTATCACAGTATCACCTGTATTTCCCTGTTTATAACAAAACTGGCATCATGAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292798 141 - 8369475 AA-----GTGTGA-TAAGATTGTGAAGATAGCTCAAGGG-GTGTGTCTATAATATGCAGAAATCA-CTTCTGGATTT------ATTCCTAATAATGTATCCAGTATCACAGTATCACCTGTATTTCCCTGTTTATAACAAAACTGGCATCATGAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885413 140 - 106955855 AA-----GTGTGA-TAAGATTGTGAAGATAGCTCAAGGGAGTGTCTTTAT--TATGCAGAAATCA-CTTCTGGATTT------ATTCCTAATAATGTGTCCAGCATCACAGTATCACCTATATTGCCCTGCTTGTAACAAAACTGGCATCATGAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197174 142 + 53671032 AA-----GTATAA-TAAGATTGTGAAGATAGCTGAAGGGAGTGGGCCTTTATTATGCAGAAATCA-CTTCTGGATTT------ATTCCTAATAATGTGTCCAGTATCACAGTATCACCTGTATTTCCCTGTTTATAACAAAACTGGCATCATGAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34650921 142 + 59248254 AA-----GTATAA-TAAGATTGTGAAGATAGCTGAAGGGAGTGGGCCTTTATTATGCAGAAATCA-CTTCTGGATTT------ATTCCTAATAATGTGTCCAGTATCACAGTATCACCTGTATTTCCCTGTTTATAACAAAACTGGCATCATAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4517507 142 - 13342542 AA-----GTATAA-TAAGATTGTGAAGATAGCTGAAGGGAGTGGGCCTTTATTATGCAGAAATCA-CTTCTGGATTT------ATTCCTAATAATGTGTCCAGTATCACAGTATCACCTGTATTTCCCTGTTTATAACAAAACTGGCATCATGAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5447964 142 + 7714307 AA-----GTGTAA-TAAGATTGTGAAGATAGCTGAAGGGAGTGGGCCTTTATTATGCAGAAATCA-CTTCTGGATTT------ATTCCTAATAATGTGTCCAGTATCACAGTATCACCTGTATTTCCCTGTTTATAACAAAACTGGCATCATGAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29255419 142 + 50890351 AA-----GTGTAA-TAAGATTGTGAAGATAGCTGAAGGGAGTGGGCCTTTATTATGCAGAAATCA-CTTCTGGATTT------ATTCCTAATAATGTGTCCAGTATCACAGTATCACCTGTATTTCCCTGTTTATAACAAAACTGGCATCATGAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 878806 142 - 2385121 AA-----GTGTAA-TAAGATTGTGAAGATAGCTGAAGGGAGTGGGCCTTTATTATGCAGAAATCA-CTTCTGGATTT------ATTCCTAATAATGTATCCAGTATCACAGTATCACCTGTATTTCCCTGTTTATAACAAAACTGGCATCATGAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314072 142 + 4274983 AA-----GTGTAA-TAAGATTGTGAAGATAGCTCAAGGGAGTGGGCCTTTATTATGCAGAAATCA-CTTCTGGATTT------ATTCCTAATAATGTGTCCGGTATCACAGTATCACCTGTATTTCCCTGTTTATAACAAAACTGGCATCATGAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28548853 140 + 49145316 AA-----GTGTGA-TAAGATTGTGAAGATAGCTCAAGGG-GTGTGTCTTTATTATGCAG-AATCA-CTTCTGGATTT------ATTCCTAATAATGTGTCCAGTATCACAGTATCACCTATATTTTCCTATTTATAACAAAACTGGCATCATGAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5392896 133 + 8899380 AA-----GTGTGA-TAAGATTGTGCAGATAGCTCAAGGG-GTATGTCTTTATTATGCAGAAATCA-CTTCTGGATTT------ATTCCTAATAATGTGTC--------CAGTATCAGCTATATTTTCCTATTTATAACAAAACTGGCATCATGAT i saiBol1.JH378197 I 393 C 0 s aotNan1.NW_018505377v1 351489 138 - 4471408 AA-----GTGTGA-TAAGATTGTGAAGATAGCTCGAGGG-GTGTGTCTTTATTATGCAGAAATCA-CTTCTGGATTT------ATTCCTAATAATGTGTCCAGTATCACAGTATCACCTATATTTTCCTATTTATAACAATACAGCCATC---AT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 565233 134 + 2501019 TA-----CTACAA-TAATAACGTGAAGATAGCTCAAGGTAGTGTGTTTTTTTAATGCTGAAATAG-CTTCTGGGTTT------ATTCCTAATAATATGTC--------CAGTATCACCTATATTTCCCTATTTATAACAAAATTGACATCATGAT i proCoq1.NW_012149263v1 C 0 I 135 s mm10.chr7 111080770 122 - 145441459 AACT---CTATGA-TAAGAATGTGATCCTCACTCAAGGAGTTGGGGTTTTTTTTT-----------TTTTTGTTTTTTTTGCATTTTCTGAAGATATTTC------------------TGGATTTATTTATTTGTAGCAAAATTAACACTGTGAT i mm10.chr7 C 0 I 5 s canFam3.chr1 4602993 138 - 122678785 --CTTTGAACTGG-TAAGAATATGCAGATAGGTCAAGGGGCTGTGTTTTTATTATGCTGAAACCAGCTTCTGGGTTT------ATTCCTAACGGTATGTC--------CTGCGTTACCTGCATTTCCCTGCGTATAACGCAGCTACCAGTATGAC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 308522 131 + 643850 AA-----TTATCATTAAGGATGGGAAAATAGCTCATAGAGATGTCTTTCTATTATGTTAAAATAA-CCTCTGGGTTT------TTTCCTGATA---TGCC--------CTGTATCATCTATATCTCCCTATTTATACCAAGAGTA-CATTGTTTT i dasNov3.JH563638 I 5 C 0 e micMur3.chr22 3948447 397 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=1173837.000000 s hg38.chr19_GL383574v1_alt 60513 119 + 155864 GATTAGTAGGCCTTAATAGTGAAAAGGCTTTTTAAGTACACAACAAATGTTTCTGT-ACTTGCTCCGATTGCCCCATTGCTTGTACTTCTGTAGTACTTGTGAGCCATAGGATCTTTTCT s panTro5.chr19 36129146 119 + 61309027 GATTAGTAGGCCTTAATAGTGAAAAGGCTTTTTAAGTACACAAAAAATGTTTCTGT-ACTTGCTCCGATTGCCCCATTGCTTGTACTTCTGTAGTACTTGTGAGCCATAGGATCTTTTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875267 119 + 64411610 GATTAGTAGGCCTTAATAGTGAAAAGGCTTTTTAAGTACACAACAAATGTTTCTGT-ACTTGCTCCGATTGCCCCATTGCTTGTACTTCTGTAGTACTTGTGAGCCATAGGATCTTTTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6292939 119 - 8369475 GATTAGTAGGCCTTAATAGTGAAAAGGCTTTTTAAGTACACAACAAATGTTTCTGT-ACTTGCTCCGATTGCCCCATTGCTTGTACTTCCGTAGTACTTGTGAGCCATAGGATCTTTTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885553 119 - 106955855 GATTAGTAGGCCTTAATAGTGAAAAGGCTTTTTAAGTACACAGCAAATGTTTCTGT-ACTTGTTCTGATTGCCCCATTGCTTGTACTTCTGTAGTACTTGTGAGCCATAGGATCTTTTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197316 119 + 53671032 GATTATTAGGCCTTAATAGTAAAAAGGCTTTTTAAGTACACAACAAATGTTTCTGT-ACTTGCTGTGATTGCCCCATTGCTTATACTTCTGTAGTGCTTGTGAGCTGTAGGATCTCTTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651063 119 + 59248254 GATTATTAGGCCTTAATAGTAAAAAGGCTTTTTAAGTACACAACAAATGTTTCTGT-ACTTGCTGTGATTGCCCCATTGCTTATACTTCTGTAGTGCTTGTGAGCTGTAGGATCTCTTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4517649 119 - 13342542 GATTATTAGGCCTTAATAGTAAAAAGGCTTTTTAAGTACACAACAAATGTTTCTGT-ACTTGCTGTGATTGCCCCATTGCTTATACTTCTGTAGTGCTTGTGAGCTGTAGGATCTCTCCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5448106 119 + 7714307 GATTATTAGGCCTTAATAGTAAAAAGGCTTTTTAAGTACACAACAAATGTTTCTGT-ACTTGCTGTGATTGCCCCATTGCTTATACTTCTGTAGTGCTTGTGAGCTGTAGGATCTCTTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29255561 119 + 50890351 GATTATTAGGCCTTAATAGTAAAAAGACTTTTTAAGTACACAACAAATGTTTCTGT-ACTTGCTGTGATTGCCCCATTGCTTATACTTCTGTAGTGCTTGTGAGCCATAGGATCTCTTCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 878948 119 - 2385121 GATTATTAGGCCTTAATAGTAAAAAGGCTTTTTAAGTACACAACAAATGTTTCTGT-ACTTGCTGTGATTGCCCCATTGCTTATACTTCTGTAGTGCTTGTGAGCCGTAGGATCTCTTCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314214 119 + 4274983 AATTATTAGGCCTTAATAGTAAAAAGGCTTTTTAAGTACACAACAAATGTTTCTGT-ACTTGCTCTGATTGCCCCATTGCTTATACTTCTGTAGTGCTTGTGAGCCATAGGATCTCTTCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28548993 118 + 49145316 GATTAATAGGCTTTAATAGTAAAAAGGGTTTTTAAGTACACAGCAAGTGTTTCTGT-ACTCACTCTGATTG-CCCATTGCTTGTACTTCCGTAGAACTTGTAAGTCACAGGATCTTTTCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393029 115 + 8899380 GATTAATAGGCTTTAATAGTAAAAAGGCTTTTTAAGTACA---CAAGTGTTCCTAT-ACTCGCTCTGATTGCCCCATTGC-TATACTTCTGTAGAACTTGTGAGTCCCAGGATCTTTTCT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 351627 119 - 4471408 GATTAATAGGCTTTAATAGTAAAAAGGCTTTTTAAGTACACAACAAGTGTTTCTGT-ACTCACTCTGATTGCCCTATTGCTTGTACTTCTGTAGAACTTGTGAGTCACAGGATCTTTTCT i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111080897 106 - 145441459 AGTTGTTAGG----AAAAAGAAAAAG--------AATATGCAGCCAATGAGTCAGTAACTCGTTCTGTATGCTC--TTGTGTTTACTGCTGTACTACTTCAGAATCACAGGCTTTCTTCT i mm10.chr7 I 5 C 0 s canFam3.chr1 4603131 115 - 122678785 --TTAGAAGACTTTAGTCAT--AGAGGTTTTGAAAGTGCACAGCAGACGAGTCCTT-GCTTGCAGTGATCAGCCCATCACTTGTGGTTCTGCAACACTTGTGGGTCACAGGATCTTTTCT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 308653 108 + 643850 GCTTGTTTGTTTT-----ATAAATTGGCTTT-----TACACAACAAATGAGTGATT-ATTTACAG-GATTGCCCCATCACTTGTGGTTTTGTAGTACTTGTGAATCATAAGATCTTTTCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565367 135 + 2501019 I e micMur3.chr22 3948447 397 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=14742.000000 s hg38.chr19_GL383574v1_alt 60632 1 + 155864 C s panTro5.chr19 36129265 1 + 61309027 C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875386 1 + 64411610 C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293058 1 - 8369475 C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885672 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197435 1 + 53671032 C i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651182 1 + 59248254 C i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4517768 1 - 13342542 C i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5448225 1 + 7714307 C i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29255680 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879067 1 - 2385121 C i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314333 1 + 4274983 C i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549111 1 + 49145316 C i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393144 1 + 8899380 C i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 351746 1 - 4471408 C i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 565502 1 + 2501019 C i proCoq1.NW_012149263v1 I 135 C 0 s mm10.chr7 111081003 1 - 145441459 C i mm10.chr7 C 0 I 2 s canFam3.chr1 4603246 1 - 122678785 C i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 308761 1 + 643850 T i dasNov3.JH563638 C 0 I 4 e micMur3.chr22 3948447 397 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=437937.000000 s hg38.chr19_GL383574v1_alt 60633 34 + 155864 AAAAGCCTTGATAAAGA-AGTTTTATAAACTTATA s panTro5.chr19 36129266 34 + 61309027 AAAAGCCTTGATAAAGA-AGTTTTATAAACTTATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875387 34 + 64411610 AAAAGCCTTGATAAAGA-AGTTTTATAAACTTATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293059 34 - 8369475 AAAAGCCTTGATAAAGA-AGTTTTATAAACTTATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885673 34 - 106955855 AAAAGCCTTGATAAAGA-AGTTTTATAAACTTATA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197436 34 + 53671032 AAAAGCCTTGATAAAGT-AGTTTTATAAACTTATA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651183 34 + 59248254 AAAAGCCTTGATAAAGT-AGTTTTATAAACTTATA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4517769 34 - 13342542 AAAAGCCTTGATAAAGT-AGTTTTATAAACTTATA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5448226 34 + 7714307 AAAAGCCTTGATAAAGT-AGTTTTATAAACTTATA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29255681 34 + 50890351 AAAAGCCTTGATAAAGT-AGTTTTATAAACTTATA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879068 34 - 2385121 AAAAGCCTTGATAAAGT-AGTTTTATAAACTTATA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314334 34 + 4274983 AAAAGCCTTGATAAAGT-AGTTTTATAAACTTATA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549112 34 + 49145316 AAAAGCCTTGATAAAAT-AGTTTTATAAACTTATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393145 34 + 8899380 AAAAGCCTTGATAAAAT-AGTTTTATAAACTTATA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 351747 34 - 4471408 AAAAGCCTTGATAAAAT-AGTTTTATAAACTTATA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3948844 34 - 30143674 AAAAGCCTTGATAAAAT-AGTTTTACAAACTTATA i micMur3.chr22 I 397 C 0 s proCoq1.NW_012149263v1 565503 34 + 2501019 AAAATCCTTGATAAAGT-AGTGTTACAAACTTATA i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111081006 28 - 145441459 AAAAGCAATGATAAAAG-------ATAAATCTGAA i mm10.chr7 I 2 C 0 s canFam3.chr1 4603247 35 - 122678785 AAAAGCCTAAATGAGACAAGTTTTAGAAATTTATA i canFam3.chr1 C 0 I 331 s dasNov3.JH563638 308766 18 + 643850 AAAAACCACGATGAAGT-A---------------- i dasNov3.JH563638 I 4 C 0 e otoGar3.GL873654 5464326 1974 + 5549422 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=377119.000000 s hg38.chr19_GL383574v1_alt 60667 30 + 155864 AGATGATTTAATGTAGTACCATAAAATTAA s panTro5.chr19 36129300 30 + 61309027 AGATGATTTAATGTAGTACCATAAAATTAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875421 30 + 64411610 AGATGATTTAATGTAGTACCATAAAATTAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293093 30 - 8369475 AGATGATTTAATGTAGTACCATAAAATTAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885707 30 - 106955855 AGATGATTTAATGTAGTACCATAAAATTAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197470 30 + 53671032 AGATGATTTAATGTAGTACCATAAAATTAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651217 30 + 59248254 AGATGATTTAATGTAGTACCATAAAATTAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4517803 30 - 13342542 AGATGATTTAATGTAGTACCATAAAATTAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5448260 30 + 7714307 AGATGATTTAATGTAGTACCATAAAATTAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29255715 30 + 50890351 AGATGATTTAATGTAGTACCATAAAATTAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879102 30 - 2385121 AGATGATTTAATGTAGTACCATAAAATTAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314368 30 + 4274983 AGATGATTTAATGTAGTACCATAAAATTAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549146 23 + 49145316 AGATGATTT-ATGTAGTACCA------TAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393179 30 + 8899380 AGATGATTTAATGTAGTACCATAAAATTAA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 351781 30 - 4471408 AGATGATTTAATGTAGTACTATAAAATTAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3948878 30 - 30143674 AAATCATTTAAGGTAGTACTATAAAATTAG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 565537 30 + 2501019 AGATCATTTAACGTAGTACTATAAAATTAA i proCoq1.NW_012149263v1 C 0 I 590 s mm10.chr7 111081034 30 - 145441459 AGGTCATTTGGTAGACTATTATAAAATGAG i mm10.chr7 C 0 C 0 s dasNov3.JH563638 308784 30 + 643850 AGATCATTTACTGTAGTATTGTAAAATCAG i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5464326 1974 + 5549422 I e canFam3.chr1 4603282 331 - 122678785 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=227897.000000 s hg38.chr19_GL383574v1_alt 60697 18 + 155864 CTGTAGCAGTAGGCTTTT s panTro5.chr19 36129330 18 + 61309027 CTGTAGCAGTAGGCTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875451 18 + 64411610 CTGTAGCAGTAGGCTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293123 18 - 8369475 CTGTAGCAGTAGGCTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885737 18 - 106955855 CTGTAGCAGTAGACTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197500 18 + 53671032 CTGTAGCAGTAGGCTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651247 18 + 59248254 CTGTAGCAGTAGGCTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4517833 18 - 13342542 CTGTAGCAGTAGGCTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5448290 18 + 7714307 CTGTAGCAGTAGGCTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29255745 18 + 50890351 CTGTAGCAGCAGGCTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879132 18 - 2385121 CTGTAGCAGTAGGCTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314398 18 + 4274983 CTGTAGCAGTAGGCTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549169 18 + 49145316 CTATAGCAGTAGGCTTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393209 18 + 8899380 CTATAGCAGTAGGCTTTT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 351811 18 - 4471408 CTATAGCAGTAGGCTTTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3948908 18 - 30143674 CTAAAGCAATAGGCTTTT i micMur3.chr22 C 0 I 576 s mm10.chr7 111081064 18 - 145441459 CTGCAGCAGTAGGCTTTT i mm10.chr7 C 0 I 101 s dasNov3.JH563638 308814 17 + 643850 TTTTAGCAGTAGGCTTT- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e otoGar3.GL873654 5464326 1974 + 5549422 I e canFam3.chr1 4603282 331 - 122678785 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=116851.000000 s hg38.chr19_GL383574v1_alt 60715 21 + 155864 TCAGGAAGACAT-----------GTGAAAT-AA s panTro5.chr19 36129348 21 + 61309027 TCAGGAAGACAC-----------ATGAAAT-AA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875469 20 + 64411610 TCAGGAAGACAC-----------GTGaaat--a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293141 20 - 8369475 TCAGGAAGAC-C-----------GTGAAAT-AA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885755 21 - 106955855 TCAGGAAGACAC-----------GTGAAAT-AA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197518 20 + 53671032 TCAAGAAGACCC-----------GTGaaat--a i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651265 20 + 59248254 TCAAGAAGACCC-----------GTGaaat--a i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4517851 20 - 13342542 TCAAGAAGACCC-----------GTGaaat--a i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5448308 20 + 7714307 TCAGGAAGACCC-----------GTGaaat--a i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29255763 20 + 50890351 TCAAGAAGACCC-----------GTGaaat--a i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879150 20 - 2385121 TCAAGAAGACCC-----------GTGaaat--a i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314416 22 + 4274983 TCAAGAAGACCC-----------GTGAAATAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549187 20 + 49145316 TCAAGAAGACAT-----------ATGaaat--a i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393227 21 + 8899380 TCAAGAAGACAT-----------ATGAAAT-AA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 351829 20 - 4471408 TCAAGAAGACAT-----------ATGaaat--a i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111081183 31 - 145441459 ttaacaagaacttggtctaaagggggaaaa--a i mm10.chr7 I 101 I 3 s dasNov3.JH563638 308831 1 + 643850 --------------------------------A i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e otoGar3.GL873654 5464326 1974 + 5549422 I e canFam3.chr1 4603282 331 - 122678785 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=291170.000000 s hg38.chr19_GL383574v1_alt 60736 51 + 155864 -Aaaaaatt------------agcaaggtgtggtagcgcacatc--tat-agtcctagctactca------------ag s panTro5.chr19 36129369 51 + 61309027 -Aaaaaatt------------agcaaggtgtggtagcacacatc--tat-agtcctagctactca------------ag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875489 51 + 64411610 -aaaaaatt------------agcaaggtgtggtagcacacatc--tat-agtcctagctactca------------ag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293161 51 - 8369475 -Aaaaaatt------------agcaaggtgtggtagcgcacatc--tat-agtcctagctactca------------ag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885776 51 - 106955855 -Aaaaaatt------------agcaagatgtggtagcgcacacc--tat-agtcctagctactga------------ag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197538 43 + 53671032 -aaaaaatt------------agcaaggtttggtagcgcatgcc--tat-agtcctaa--------------------g i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651285 43 + 59248254 -aaaaaatt------------agcaaggtttggtagcgcatgcc--tat-agtcctaa--------------------g i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4517871 43 - 13342542 -aaaaaatt------------agcaaggtttggtagcgcatgcc--tat-agtcctaa--------------------g i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5448328 43 + 7714307 -aaaaaatt------------agcaaggtgtggtagcgtatgcc--tat-agtcctaa--------------------g i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29255783 45 + 50890351 -aaaaaatt------------agcaaggtgtggtagcgcatgcctatat-agtcctaa--------------------g i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879170 43 - 2385121 -aaaaaatt------------agcaaggtgtggtagcgcatgcc--tat-agtcctaa--------------------g i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314438 48 + 4274983 -AAAAAATT------------AG-AAggtgtggtagcacatacc--tat-agtcctagctactt--------------g i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549207 51 + 49145316 -aaacaaat------------atcggggagtggtagcacatgcc--tgt-agtcctagctactca------------ag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393248 51 + 8899380 -Aaaaaaat------------atcggggagtggtagcacacacc--tat-agtcctagctactca------------ag i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 351849 51 - 4471408 -aaaaaaat------------atcggggagtggtagcacacgcc--tat-agtcctagctactca------------ag i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5466300 51 + 5549422 -aaaaaaat------------agccaggctttgtggcgggcgcc--tat-agtcccagctactca------------gg i otoGar3.GL873654 I 1974 C 0 s mm10.chr7 111081217 76 - 145441459 -aaGAAACTTGACTCTTTGAAaactgtgcacaatggcatatgcc--tgtgacttcttgctgcataggcaactacattgg i mm10.chr7 I 3 C 0 s dasNov3.JH563638 308832 23 + 643850 AAAAAAAGT--------------------------------GCT--TGT-TTTACAAG--------------------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e canFam3.chr1 4603282 331 - 122678785 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=1188897.000000 s hg38.chr19_GL383574v1_alt 60787 136 + 155864 aggctgaggcaggaagatcattgggtcccaggagttagaagttgcagcgagctgtgattgcgccactgcactcc--a--gccagagcaacagaacaagac----cctatcctgtccctaaaaaacaa----aaaacaaaaTGTGTTTT s panTro5.chr19 36129420 140 + 61309027 aggctgaggcaggaagatcattgggtcccaggagttagaagttgcagcgagctgtgattgcgccactgcactcc--a--gccagagcgacagaacaagac----cctatcctgtccctaaaaaacaaaaacaaaaCAATATGTGTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875540 140 + 64411610 aggctgaggcaggaagatcattgggtcccaggagttagaagttgcagcgagctgtgattgcgccactgcactcc--a--gccagagcgacagaacaagac----cctatcctgtccctaaaaaacaaaaacaaaaCAATATGTGTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293212 140 - 8369475 aggctgaggcaggaagatcactgggccccaggagttagaagttgcagcgagctgtgattgcgccactgcactcc--a--gccagagcgacagaacaagac----cctatcctgtctctaaaaaacaaaaacaaaacaaaaTGTGTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885827 140 - 106955855 aggctgaggcgggaagatcactgggtcccaggagttagaagttgcagcgagctgtgattgcgccactgcactcc--a--gccagagcgacagaacaagac----cctaccctgtctctaaaaaacaaaaacaaaacaaaaTGTGTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197581 140 + 53671032 aggctgaggcaggaagatcactggggcccaggagttagaagttgcagcgagctgtgattgcgccactacactct--a--gctggagcgacagagcaagac----actaccctgtctctaaaaaacgaaaacaaaacaaaaTGTGTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651328 140 + 59248254 aggctgaggcaggaagatcactggggcccaggagttagaagttgcagcgagctgtgattgcgccactgcactct--a--gctggagcgacagagcaagac----actaccctgtctctaaaaaacgaaaacaaaacaaaaTGTGTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4517914 140 - 13342542 aggctgaggcaggaagatcactggggcccaggagttagaagttgcagcgagctgtgattgcgccactgcgctct--a--gctggagcgacagagcaagac----actaccctgtctctaaaaaacgaaaacaaaacaaaaTGTGTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5448371 140 + 7714307 aggctgaggcaggaagatcactggggcccaggagttagaagttgcagcgagctgtgattgcgccactgcactct--a--gctggagtgacagagcaagac----actaccctgtctctaaaaaacgaaaacaaaacaaaaTGTGTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29255828 140 + 50890351 aggctgaggcaggaagatcactggggcccaggagttagaagttgcagcgagctgtgattgcaccactgcactcc--a--gctggagcgacagagcaagac----actaccctgtctctaaaaaacgaaaacaaaacaaaaTGTGTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879213 140 - 2385121 aggctgaggcaggaagatcactggggcccaggagttagaagttgcagcgagctgtgattgcgccactgcactcc--a--gctggagcgacagagcaagac----actaccctgtctctaaaaaacgaaaacaaaacaaaaTGTGTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314486 142 + 4274983 aggctgagacaggaagatcagtggggcccaggagttagaagttgcagcgagctgtgatagcgcccatgcacgctgca--gctggagcgacagagcaagac----gctaccctgtctctaaaaaacgaaaacaaaaCAAAATGTGTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549258 138 + 49145316 agactgaggcaggaagatcgatggagcccaggaggtagaagttacagtgagctgtgattgtgccactgcactcc--a--ccctgggcaacagagcaagac----cctactctgtctttaaaagacagaaacaaaacaaaa--TGTTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393299 128 + 8899380 agactgaggcaggaagatcgctggagcccaggaggtagaagttacagtgagctgtgattgtgccactgcactcc--a--ccctgggcaacagagcaagac----cctactctgtctctaaaaaacagaaacaaaac------------ i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 351900 133 - 4471408 agactgagacaggaagatcgctggagcccaggaggtagaagttgcagtgagctgtgattgtgccactgcactct--a--ccctgggcaacagagcaag---------actctgtctctaaaaaacagaaacaaaacaaaa--TGTTAT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5466351 146 + 5549422 aggctgaggcaagagaatcacctaagcccaggagttggaggttgctgtgagctatgatgacaaaataagactct--gtctcttaaaaaacaaacaaaaaCTTGatttatttattttttaaaaaaaaaaaCTTATAACAAATGTTTTGT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111081293 96 - 145441459 gagctgaggcagaaagatcatttgggtgcagatact--------cagtg-----------------------cc--a--gcctgagcagcttagccactc----cctatct-------------caaaCATCACTTACCACTCCCTTC i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e dasNov3.JH563638 308855 0 + 643850 C e canFam3.chr1 4603282 331 - 122678785 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=4056.000000 s hg38.chr19_GL383574v1_alt 60923 1 + 155864 A---- s panTro5.chr19 36129560 1 + 61309027 A---- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875680 1 + 64411610 A---- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293352 1 - 8369475 A---- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885967 1 - 106955855 A---- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197721 1 + 53671032 A---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651468 1 + 59248254 A---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518054 1 - 13342542 A---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5448511 1 + 7714307 A---- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29255968 1 + 50890351 A---- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879353 1 - 2385121 A---- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314628 1 + 4274983 A---- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549396 1 + 49145316 A---- i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 352033 1 - 4471408 A---- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5466497 5 + 5549422 AACTG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111081389 1 - 145441459 A---- i mm10.chr7 C 0 C 0 s canFam3.chr1 4603613 1 - 122678785 A---- i canFam3.chr1 I 331 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e dasNov3.JH563638 308855 0 + 643850 C e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I e saiBol1.JH378197 5393427 0 + 8899380 C a score=123024.000000 s hg38.chr19_GL383574v1_alt 60924 20 + 155864 TAAGTGATTATAAAATG-TT-T- s panTro5.chr19 36129561 19 + 61309027 taagtgattataaaat--tt-t- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875681 20 + 64411610 taagtgattataaaatg-tt-t- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293353 21 - 8369475 taagtgattataaaatgttt-t- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885968 19 - 106955855 TAAGTGATTATAAAAT--GT-T- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197722 19 + 53671032 taagtgattataaaatg-tg--- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651469 19 + 59248254 TAAGTGATTATAAAATG-TG--- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518055 19 - 13342542 taagtgattataaaatg-tg--- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5448512 19 + 7714307 taagtgattataaaatg-tg--- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29255969 20 + 50890351 TAAGTGATTATAAAATG-TGT-- i chlSab2.chr6 C 0 I 4523 s manLeu1.NW_012102454v1 879354 19 - 2385121 taagtgattataaaatg-tg--- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314629 19 + 4274983 taagtgattataaaatg-tg--- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549397 19 + 49145316 TAAGTAATTATAAAATG-TT--- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393427 8 + 8899380 -----------aaaaTG-TT--- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 352034 19 - 4471408 AGGGATTATAAaaaacg-tt--- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5466502 19 + 5549422 TAAGTGATTATAAAGTG-TT--- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111081390 18 - 145441459 TAAGT-ATTATAAGCTG-TT--- i mm10.chr7 C 0 I 1 s canFam3.chr1 4603614 19 - 122678785 TAAGTAATCACAAAATA-TT--- i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 308855 20 + 643850 TAAATGATTCCAAAATG-TT--T i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=964130.000000 s hg38.chr19_GL383574v1_alt 60944 95 + 155864 TTTTCATAGGCCAAAACTT-ACATAA----------------ACCATGAT--TTCCCATTATAATCCAGTGGAAAAATTGTAATGCTTCTATTAGTGGTAACTTAATTTTGAAA s panTro5.chr19 36129580 95 + 61309027 ttttcataggtcaaaactt-atataa----------------accatgat--ttcccattataatccagtggaaaaattgtaatgcttctattagtggtaaCTTAATTTTGAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875701 95 + 64411610 ttttcataggtcaaaactt-atataa----------------accatgat--ttcccattataatccagtggaaaaattgtaatgcttctattagtggTAACTTAATTTTGAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293374 95 - 8369475 ttttcataggccaaaactt-atataa----------------accatgat--ttcccattataatccagtggaaaaattgtaatgcttctattagtggTAACTTAATTTTGAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63885987 94 - 106955855 TTTTCATAGGCC-AAACTT-ATATAA----------------ACCATGAT--TTCCCATTATAATCCAGTGGAAAAATTGCAATGCTTCTATTAGTGGTAACTTAATTTTGAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197741 95 + 53671032 tttccttagaccaaaactt-atataa----------------accatgat--ttcccattataatccaatggaaaaattacaatgcttctattagtggtaaCTTAATTTTGAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651488 95 + 59248254 TTTCCTTAGACCAAAACTT-ATATAA----------------ACCATGAT--TTCCCATTATAATCCAATGGAAAAATTGCAATGCTTCTATTAGTGGTAACTTAATTTTGAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518074 95 - 13342542 tttccttagaccaaaactt-atataa----------------accatgat--ttcccattataatccaatggaaaaattgcaatgcttctattagtggtaaCTTAATTTTGAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5448531 95 + 7714307 tttccttagaccaaaactt-atataa----------------accatgat--ttcccattataatccaatggaaaaattgcaatgcttctattagtggtaaCTTAATTTTGAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29260512 93 + 50890351 TTTTCTTAGACCAAAACTT-ATATAA----------------ACCATGAT--TTCCCATTATAATCCAATGGAAAAATTGCAATGCTTC--TTAGTGGTAACTTAATTTTGAAG i chlSab2.chr6 I 4523 C 0 s manLeu1.NW_012102454v1 879373 93 - 2385121 tttccttagaccaaaactt-atataa----------------accatgat--ttcccattataatccaatggaaaaattgcagtgcttc--ttagtggTAACTTAATTTTGAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314648 95 + 4274983 ttttcttagaccaaaactt-atataa----------------accatgat--ttcccattataatccaatggaaaaattgcaatacttctattagtggTAACTTAATTTTGAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549416 95 + 49145316 TTTTCATAGGCCAAAACTT-ACATAA----------------GCCATGAT--TTCCCATTATAATCCAATGGAAAAATTGTATTGCTTCTATTAGTGGTAACTTAATTTTTAAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393435 95 + 8899380 TTTTCATAGGCCAAAACAT-ATATAA----------------GCTATGAT--TTCCCATTATAATCCAATGGAAAAATTGTAATGCTTCTGTTAGTGGTAACTTAATTTTTAAA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 352053 95 - 4471408 tttttatgggccaaaactt-acataa----------------gccatgat--ttcccattataatccaatggaaaaattgtaatgcttctattagtggTAACTTAATTTTTAAA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5466521 92 + 5549422 ----AATAGGCTGCAACTTAATACAA-------------ACCACCATGAT--TTCCCATTATAATCC-TTAAGAAAAGTGTACTATTTCTATTAGTAGTAAC--AATTCTGAAA i otoGar3.GL873654 C 0 I 33 s mm10.chr7 111081409 77 - 145441459 --CTTATGAGCTAAAA--T-ATTATA----------------GCCATAAA--G--------------AATGAAAACTTAACAGTGGTTCTATTAATAGTACTGTATATTTACAG i mm10.chr7 I 1 C 0 s canFam3.chr1 4603634 81 - 122678785 -TCTCATAGGCTAGAACTT-CTACAA----------------ACCACCATGATTCCCATTATGATC-AATGG-AATATTGCATTGTTTCTGTTAATGGTAG------------- i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 308875 98 + 643850 -TCTCTTAGACCAAAAGTT-ATATAAAAAATTTATGTAAACCACCATAAT--TTCTTATAATA----AATGGAAAAATTGCAGTATTTCTGTTAATGGCAATGTAG-------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=243381.000000 s hg38.chr19_GL383574v1_alt 61039 60 + 155864 TGTTAAGTAGATTGTGCCTGTGTCGGTTTCTGGGTTTTGATAAATGATCATTTATTTGGC s panTro5.chr19 36129675 60 + 61309027 TGTTAAGTAGATTGTGCCTGTGTCGGTTTCTGGGTTTTGATAAATGATCATTTATTTGGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875796 60 + 64411610 TGTTAAGTAGATTGTGCCTGTGTCGGTTTCTGGGTTTTGATAAATGATCATTTATTTGGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293469 60 - 8369475 TGTTAAGTAGATTGTGCCTGTGTCGGTTTCTGGGTTTTGATAAATGATCATTTATTTGGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886081 60 - 106955855 TGTTAATTAGATTGTGCCTGTGTCGGTTTCTGGGTTTTGATAAATGATCATTTATTTGGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197836 56 + 53671032 TGT----TAGATTGTGCCTGTGTTGGTTTCTTCGTTTTGATAAATGATCATTTATTTGGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651583 56 + 59248254 TGT----TAGATTGTGCCTGTGTTGGTTTCTTCGTTTTGATAAATGATCATTTATTTGGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518169 56 - 13342542 TGT----TAGATTGTGCCTGTGTTGGTTTCTTCGTTTTGATAAATGATCATTGTTTTGGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5448626 56 + 7714307 TGT----TAGATTGTGCCTGTGTTGGTTTCTTCGTTTTGATAAATGATCATTTATTTGGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29260605 56 + 50890351 TGT----TAGATTGTGCCTGTGTTGGTTTCTTGGTTTTGATAAATGATCATTTATTCGGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879466 56 - 2385121 TGT----TAGATTGTGCCTGTGTTGGTTTCTTGGTTTTGATAAATGATCATTTATTTGGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314743 56 + 4274983 TGT----TAGATTGTGCTTGTGTCGGTTTCTTGGTTTTGATAAATGATCATTTATTTGGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549511 24 + 49145316 TAG----T--------------------------------TTAATGATCGTTTATTTGGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393530 24 + 8899380 TGG----T--------------------------------TTAATGATCATTTATTTGTC i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 352148 24 - 4471408 TGG----T--------------------------------TTAATGATTATTTATTTGGC i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111081486 29 - 145441459 -------------------------------TGTCTCTGGTAACTAAGCTTTTCACTAAA i mm10.chr7 C 0 I 1 s canFam3.chr1 4603715 4 - 122678785 ------------------------------------------AGTA-------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 308973 15 + 643850 ---------------------------------------------GCTCAGGCATTGGGC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e otoGar3.GL873654 5466613 33 + 5549422 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=3083519.000000 s hg38.chr19_GL383574v1_alt 61099 307 + 155864 TAACTTTGCCATTAATGGCT--GAAATGGTATTGCACATTTGTAA-GTGCATACTT-TAGATAATCATAAATTGGGGAAATATTACTAATAAATTATCCCTGAATCATCTAGGTACAT----AATAAT----GCATTG---TCAGCACTCAC-------CAGT-------TGTTTGACACCTG--C-----AAATATGCACAGATGGACAGTAACATTTGCAGCATATTTGGGGGA-TTTTTTTACGTGAAATGAGCA--TTTTTTTTAAGC-AAAACATTATATTTTGGAATA--ATTATGAGATGTGAG---TG---CCTAAGCAGAGATGTACAGCAAACA-TTATCAGGACA s panTro5.chr19 36129735 310 + 61309027 TAACTTTGCCATTAATGGCT--GAAATGGTATTGCACATTTGTAA-TTGCATACTT-TAGATAATCATAAATTGGGGAAATATTACTAATAAATTatccctgaatcatctaggtacat----aataat----gcattg---tcagcactcac-------cagt-------tgtttgacacctg--c-----aaatattcacagatggacagtaacatttgcaacatatttgggggattttttttacatgaaatgagcattttttttttaagc-aaaacattatattttggaata--attatgagatgtgag---tg---cctaagcagagatgtacagcaaaca-ttatcaggaca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39875856 310 + 64411610 TAACTTTGCCATTAATGGCT--GAAATGGTATTGCACATTTGTAA-TTGCATACTT-TAGATAATCATAAATTGGGGAAATATTACTAATAAATTatccctgaatcatctaggtacat----aataat----gcattg---tcagcactcac-------cagt-------tgtttgacacctg--c-----aaatatgcacagatggacagtaacatttgcaacatatttggggga-tttttttacatgaaatgagcattttttttttaagc-aaaacattatattttggaata--attatgagatgtgag---tg---cctaagcagagatgtacagcaaacatttatcaggaca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293529 307 - 8369475 TAACTTTGCCATTAATGGCT--GAAATGGTATTGCACATTTGTAA-TTGCATACTT-TAGATAATCACAAATTGGGGAAATATTACTAATAAATTatccctgaatcatctaggtgcat----aataat----gcattg---tcagcactcac-------cagt-------tgtttgacacctg--c-----aaatatgcacagatggacagtaacatttgcagcatatttggggga-tttttttacatgaaatgagca--ttttttttaagc-aaaacattatattttggaata--attatgagatgtgag---ta---cctaagcagagatgtacagcaaaca-ttatcaggaca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886141 308 - 106955855 TAACTTTGCCATTAATGGCT--GAAATGGTATTGCATATTTGTAA-TTGCATACTT-TAGATAATCATAAATTGGGGAAATATTACTAATAAATTATCCCCGAATCATCTGGGTACAT----AATAAT----GCATTG---TCAGCACTCAC-------CAGT-------TGTTTGACGCCTG--C-----AAATATGCACAGATGGACAGTAACATTTGCAGCATATTTGGGGGA--TTTTTTACATGAAATGAGCATTTTTTTTTTAAGC-AAAACATTATATTTTGGAATA--ATTATCAGATGTGAG---TG---CCTAAGCAGAGATATACAGCAAACA-TTATCAGGACA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30197892 308 + 53671032 TAACTTTGCCATTAATAGCT--AAAATACTATTGCACATTTGGAA-TTGCATACTT-TAGATAATCATAAATTGGGGAAATATTACTAATAAAATATCCCTGAATCATCTGGGTACAT----AATAAT----GCATTG---TCAGCAttcac-------tagt-------tgtttgacgcctg--c-----aaatatgcacagatggacagtaacatttgcagcatatttgggggg--ttttttgcatgaaatgggcattatttttttaagc-aaaatattatattttggaata--agtatgagatgtgag---tg---cctgagcagagatttacagcaaaca-ttatcaggaca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651639 308 + 59248254 TAACTTTGCCATTAATAGCT--AAAATACTATTGCACATTTGGAA-TTGCATACTT-TAGATAATCATAAATTGGGGAAATATTACTAATAAAATATCCCTGAATCATCTGGGTACAT----AATAAT----GCATTG---TCAGCATTCAC-------CAGT-------TGTTTGACGCCTG--C-----AAATATGCACAGATGGACAGTAACATTTGCAGCATATTTGGGGGG--TTTTTTGCATGAAATGGGCATTATTTTTTTAAGC-AAAATATTATATTTTGGAATA--AGTATGAGATGTGAG---TG---CCTGAGCAGAGATTTACAGCAAACA-TTATCAGGACA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518225 309 - 13342542 TAACTTTGCCATTAATAGCT--AAAATACTATTGCAcatttggaa-ttgcatacttatagataatcataaattggggaaatattactaataaaatatccctgaatcatctgggtacat----aataat----gcattg---tcagcattcac-------cagt-------tgtttgacgcctg--c-----aaataggcacagatggacagtaacatttgcagcatatttgggggg--ttttttgcatgaaatgggcattatttttttaagc-aaaatattatattttggaata--agtatgagatgtgag---tg---cctgagcagagatttacagcaaaca-ttaccaggaca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5448682 308 + 7714307 TAACTTTGCCATTAATAGCT--AAAATACTATTGCACATTTGGAA-TTGCATACTT-TAGATAATCATAAATTGGGGAAATATTACTAAtaaaatatccctgaatcatctgggtacat----aataat----gcattg---tcagcattcac-------cagt-------tgtttgacgcctg--c-----aaatatgcacagatggacagtaacatttgtagcatatttgggggg--ttttttgcatgaaatgggcattatttttttaagc-aaaatattatattttggaata--agtatgagatgtgag---tg---cttgagcagagatttacagcaaaca-ttatcaggaca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29260661 308 + 50890351 TAACTTTGCCATTAATAGCT--AAAATACTATTGCACATTTGGAA-TTGCGTACTT-TAGATAATCATAAATTGGGGAAATATTACTAATAAAATATCCCTGAATCATCTGGGTACAT----AATAAT----GCATTG---TCAGCATTCAC-------CAGT-------TGTTTGACGCCTG--C-----AAATATGCACAGATGGACAGTAACATTCGCAGCATATTTGGGGGA--TTTTTTGCATGAAATGGGCATTATTTTTTTAAGC-AAAATATTATATTTTGGAATA--AGTATGAGATGTGAG---TT---CCTGAGCAGAGATTTACAGCAAACA-TTATCAGGACA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879522 307 - 2385121 TAACTTTGCCATTAATAGCT--AAAATACTATTGCACATTTGGAA-TTGCATACTT-TAGATAATCATAAATTGGGGAAATATTACTAAtaaaatatccctgaatcatctgggtacat----aataat----gcattg---tcagcattcac-------cagt-------tgtttgacgcctg--c-----aaatatgcacagatggacagtaacatttgcagcatatttggggga--ttttttgcatgaaatgggcattatttttttaagc-aaaatattatattttggaata--agtatgagatgtgag---tg---cctgagcagaga-ttacagcaaaca-ttatcaggaca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2314799 307 + 4274983 TAACTTTGCCATTAATAGCT--AAAATAGTATTGCACATTTGGAA-TTGCATACTT-TAGATAATCATAAATTGGGGAAATATTACTAATAAAATATCCCTGAATCATCTGGGTACAT----AATAAT----GCATTG---TCAGCACtcac-------ccgt-------tgttggacgcctg--c-----aaatatgcacagatggacagtaacatttgcagcgtgtttggggga--ttttttgcatgaaatgggt-ttttttttttaagc-aaaatattatattttggaata--agtatgagatgtgag---tg---cctgagcagagatttacagcaaaca-ttatcaggaca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549535 304 + 49145316 TAACTTTGCCATTAATGACT--GAAATGGTATTGCATATTTGTAA-TTGCATACTT-TAGATAATCCTAAAGTGAGGAGATGTTACTAATAAATTATCCCTGAATTATCTGGGAACAT----AATAAT----GCATTG---TCAGCACTCAT-------CAGT-------TGTTTGAGGCCTG--C-----AAACATGCACAGATAGACAGTAACATTTGCAGCATGTTT-GGGGA--TTTGTTGCTTAAAATTAGCA---TTTTTTTAAGC-AAAACATTATATTTTGGAATA--ATTATGAGATGTGGA---TA---CCTGAGCAGAGATTTATAGCAAACA-TAACCAGAAGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393554 303 + 8899380 TAACTTTGCCATTAATGGCT--GAAATGGTATTTCATATTTGTAA-TTGCATACTT-TAGATAATCCTAAAGTGGGGAAATATTACTAACAAATTATCCCTGAATTATCTGGGTACAT----AATAAT----GCATTG---TCAGCACTCAT-------CAGT-------TGTTTGAGGCCTG--C-----AAATATACACAGATAGACAGTAACATTTGCAGCGTATTT-GGGGA--TTTTTTGCATGAAGTTAGCA----TTTTTTAAGC-AAAACATTATATTTTGGAATA--ATTATGAGATGTGGG---TA---CCTGAGCAGAGATTTACAGCAAACA-TTATCAGGAAA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 352172 295 - 4471408 TAACTTTGCCATTAATGGCT--GAAATGA-ATTGCATATTTTTAT-TTGCATACTT-TAGATAGTCCTAAAGTGGGGAAATATTACT----AATTATCCCTGAATTATCTGGGTACAT----AATAAT----GAATTG---TCAGCACtcat-------cagt-------tgtttgaggcctg--c-----aaatatgc----atagacagtaacatttgcagcatattt-gggga--ttttttgcatgaaattagca---tttttttaagc-aaaacattatattttggaata--attatgagatgtggg---ta---cctgagcagggatttacagcaaaca-ttatcaggaga i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5466646 292 + 5549422 TAACTTTGCCATTAGTAGCT--GAA-----ATTATACATTTGTAA-TTGCAAAACT-TAGATAATCATGAACTTGGGGAATATTACTAATAAATTGTTTCTGAA----------GCAT----AATAAT----CAGTTG---TCAGCCCTCACCTGTTCACAAT-------TGTTTGGAGCCTG-------------TGCAAGGATGGTCAGTGACAGTTGCAGTATATTTGAAGAT--ATTTTTGCACAAAATGAGCA----TAATTTAAGC---AACATTATATTTCGGTAGAATATCATGGGATATCAGAGCTA---CCTGAGTAGAGATTGACAGCAAAAA-CC-TAGGGACA i otoGar3.GL873654 I 33 C 0 s mm10.chr7 111081516 268 - 145441459 TAAC-TTGCCATTAATGTCT--GGAA--ATATGTAAACATCGTTA-TTGCACACT--TGGAGGACC------TGGGG--------------AATTGTCCCTGGGAT-TCCGAGTACTC----TATGACCAGAGGTGGG---TCAGCATTCAC-------CCTT-------TTCCCCAGGTGAC--C-----TAGCATGCAC-----------------TGTAGCATTCCTGGGGAT--TTTCTTTTTTAAAATGAACG--TAATTTTTAAGCAAAAATCCCCCATTTTAGTACAATATCATGAAATCTAAG---AT---CTT---TAGAAATGTAGAGCAAATG-CTACAGGAACA i mm10.chr7 I 1 C 0 s canFam3.chr1 4603719 323 - 122678785 -AGCTTTGGCATTAATGGCTG-GAAATAGTGATACACATTTGTAATTTACAAGCTT-TCAAGAACCATAAACTTGGGAAA-ATTACTAATAAACAGTCCCTAAAGCATCT-GGTACATGGAAACCAAT----GCATTG---TCAACACTCAC-------CAATTCACCAGTGGTTGGAGCCTGTGC-----ACATATGCACAGTTGGGTAGTAACATTTACAGCATACTTGGAATT-TTTTTTTACATGAAATGAGCAGAATTTTCTTAAGC-AGAACATATTATGGTGCAAT---ATCATAGGATATGAA---AGCACCTTCACCAGAGATTTGCAGCAAACA-TTATAGAGACA i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 308988 295 + 643850 --------------------TAGAAATAGTGATATGCATTTG-AA-TTGCACAGTT-TATATAAATATTACTTTGGT---CATTACT--------GTCCCTGAAGTATCTGGGTACGT----AATAA-----ACATTATGTTCAGCATTCTC-------CGTCTCCCCAGTGTTTGGAACCTG--TGCAAAAAAAGTGCACAGGCTGGTAGTAACATGTGCAGCGTATTCCTGAGT--ATTTTCACATAAAATGAGCA--TAATTTTTAAGC-AAAACATTATATTTTGGTGCAATATCATGGAATATGAG---AGTACTCTGAACAAATTTTTACATCAGATA-TTATAGGGGCA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=64220.000000 s hg38.chr19_GL383574v1_alt 61406 5 + 155864 GAAAG s panTro5.chr19 36130045 5 + 61309027 gaaag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876166 5 + 64411610 gaaag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293836 5 - 8369475 gaaag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886449 5 - 106955855 GAAAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198200 5 + 53671032 gaaag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651947 5 + 59248254 GAAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518534 5 - 13342542 gaaag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5448990 5 + 7714307 gaaag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29260969 5 + 50890351 GAAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879829 5 - 2385121 gaaag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315106 5 + 4274983 gaaag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549839 5 + 49145316 GAAAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393857 5 + 8899380 GAAAG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 352467 5 - 4471408 gaaag i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5466938 5 + 5549422 AAAAG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111081784 5 - 145441459 AAAAA i mm10.chr7 C 0 C 0 s dasNov3.JH563638 309283 5 + 643850 AAAAG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e canFam3.chr1 4604042 3 - 122678785 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=266731.000000 s hg38.chr19_GL383574v1_alt 61411 21 + 155864 CATGATGGGAGCACCCGATGT s panTro5.chr19 36130050 21 + 61309027 catgatgggagcacccgatgt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876171 21 + 64411610 catgatgggagcacccgatgt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293841 21 - 8369475 catgatgggagcacccgatgt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886454 21 - 106955855 CATGATGGGAGCACCCGATGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198205 21 + 53671032 catgatgggagcacccgatgt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651952 21 + 59248254 CATGATGGGAGCACCCGATGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518539 21 - 13342542 catgatgggagcacccgatgt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5448995 21 + 7714307 catgatgggagcacccgatgt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29260974 21 + 50890351 CATGATGGGAGCACCCGATGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879834 21 - 2385121 catgatgagagcacccgatgt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315111 21 + 4274983 catgacaggagcacccaatgt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549844 18 + 49145316 C---ATGAGAGCACCCGATGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393862 21 + 8899380 CACGATGAGAGCACCTGATGT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 352472 21 - 4471408 catgatgagagcacctgatgt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5466943 21 + 5549422 CATGATGAGAGCTCCTAATAT i otoGar3.GL873654 C 0 I 2 s mm10.chr7 111081789 21 - 145441459 CATGAGTAGAGTATTTAATGT i mm10.chr7 C 0 C 0 s canFam3.chr1 4604045 21 - 122678785 CATGATGGGAGCATCTGATGT i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 309288 21 + 643850 CATAGTGGTAGCACCTGATGT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=22800.000000 s hg38.chr19_GL383574v1_alt 61432 2 + 155864 TA s panTro5.chr19 36130071 2 + 61309027 ta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876192 2 + 64411610 ta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293862 2 - 8369475 ta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886475 2 - 106955855 TA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198226 2 + 53671032 ta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651973 2 + 59248254 TA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518560 2 - 13342542 ta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449016 2 + 7714307 ta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29260995 2 + 50890351 TA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879855 2 - 2385121 ta i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315132 2 + 4274983 ta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549862 2 + 49145316 TA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393883 2 + 8899380 TA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 352493 2 - 4471408 ta i aotNan1.NW_018505377v1 C 0 I 7 s canFam3.chr1 4604066 2 - 122678785 TA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 309309 2 + 643850 CA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e otoGar3.GL873654 5466964 2 + 5549422 I e mm10.chr7 111081810 0 - 145441459 C e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=483190.000000 s hg38.chr19_GL383574v1_alt 61434 39 + 155864 CATTCTTCAGTTCATGCTGTGACCAGGC---GACCTCATAAA s panTro5.chr19 36130073 39 + 61309027 cattcttcagttcatgctgtgaccaggc---gacctcataaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876194 39 + 64411610 cattcttcagttcatgctgtgaccaggc---gacctcataaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293864 39 - 8369475 cattcttcagttcatgctgtgaccaggc---aacctcataaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886477 42 - 106955855 TATTCTTCAGTTCATGCTGTGACCAGGCTCTGACCTCATAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198228 42 + 53671032 cattcttcagttcatgctgtgaccaggctctggcctcataaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34651975 42 + 59248254 CATTCTTCAGTTCATGCTGTGACCAGGCTCTGGCCTCATAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518562 42 - 13342542 cattcttcagttcatgctgtgaccaggctctggcctcataaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449018 42 + 7714307 cattcgtcagttcatgctgtgaccaggctctggcctcataaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29260997 42 + 50890351 CATTCTTCAGTTCATGCTGTGACCAGGCTCTGGCCTCATAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879857 42 - 2385121 cattcttcagttcatgctgtgaccaggctctggcctcataaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315134 42 + 4274983 cattcttcagttcatgctgtgaccaggctctggcctcataaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549864 42 + 49145316 CATTCTTCAGTTCATGCTGTGACTAGGCTCTGACCTCATGAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393885 42 + 8899380 CATTCTTCAGTTCGTGCTGTGACCAGGCTCTGACCTCATGAA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 352502 42 - 4471408 cattcttcagttcgtgctgtgaccaggctctgacctcatgaa i aotNan1.NW_018505377v1 I 7 C 0 s otoGar3.GL873654 5466966 42 + 5549422 CATTCTTCAGTTCTTATTGTGACCAGCCTTTGACCTCATAAA i otoGar3.GL873654 I 2 C 0 s mm10.chr7 111081810 17 - 145441459 CATTCT-------------------------GACCTCATAGA i mm10.chr7 C 0 C 0 s canFam3.chr1 4604068 42 - 122678785 CATTCTTCTGTTCATACTGTGACCACACTCTGACCTCATAAA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 309311 41 + 643850 CATTCTTCTGTGCGTGCTATGACCAT-CTCTATACTCGTAAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e cebCap1.NW_016107633v1 1600301 2957 - 2680843 I a score=261787.000000 s hg38.chr19_GL383574v1_alt 61473 23 + 155864 AGGAAAAAT-ATAATGT-AT---AAGTA s panTro5.chr19 36130112 23 + 61309027 aggaaaaaT-ATAATGT-AT---AAGTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876233 23 + 64411610 aggaaaaaT-ATAATGT-AT---AAGTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293903 23 - 8369475 aggaaaaaT-ATAATGT-AT---AAGTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886519 23 - 106955855 AGGAAAAAT-ATAATTT-AT---AAGTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198270 23 + 53671032 aggaaaaat-ataattt-gT---AAGTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652017 23 + 59248254 AGGAAAAAT-ATAATTT-GT---AAGTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518604 23 - 13342542 aggaaaaat-ataattt-gT---AAGTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449060 23 + 7714307 aggaaaaaT-ATAATTT-AT---AAGTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261039 23 + 50890351 AGGAAAAAT-ACAGTTT-AT---AAGTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879899 23 - 2385121 aggaaaaGT-ATAATTT-AT---AAGTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315176 23 + 4274983 aggaaaaaT-ATGATTT-AT---AAGTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549906 23 + 49145316 AGGAAAAAT-ATAATTT-AT---AAGTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393927 23 + 8899380 AGGAAAAAT-ATAATTT-AT---GAGTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603258 23 - 2680843 AGGAAAAAT-GTAATTT-AT---AAGTA i cebCap1.NW_016107633v1 I 2957 C 0 s aotNan1.NW_018505377v1 352544 20 - 4471408 aggaaaaaT-ATAATTT-A-----AGt- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5467008 23 + 5549422 AGGAAAACT-AAAATTT-AT---AGGTA i otoGar3.GL873654 C 0 I 87 s mm10.chr7 111081827 23 - 145441459 AGGAAAAAT-GGAATTTGAT---AAGT- i mm10.chr7 C 0 C 0 s canFam3.chr1 4604110 24 - 122678785 AGGAAAAATGGGAGTTT-GT---AAGTA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 309352 26 + 643850 AGAAAGAAT-TGAGGTT-TTGTGAAGTA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I a score=36595.000000 s hg38.chr19_GL383574v1_alt 61496 3 + 155864 CAA s panTro5.chr19 36130135 3 + 61309027 CAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876256 3 + 64411610 CAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293926 3 - 8369475 CAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886542 3 - 106955855 CAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198293 3 + 53671032 CAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652040 3 + 59248254 CAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518627 3 - 13342542 CAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449083 3 + 7714307 CAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261062 3 + 50890351 CAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879922 3 - 2385121 CAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315199 3 + 4274983 CAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549929 3 + 49145316 CAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393950 3 + 8899380 CAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603281 3 - 2680843 CAA i cebCap1.NW_016107633v1 C 0 C 0 s mm10.chr7 111081850 3 - 145441459 CAA i mm10.chr7 C 0 C 0 s canFam3.chr1 4604134 3 - 122678785 CAC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 309378 3 + 643850 CAC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e otoGar3.GL873654 5467031 87 + 5549422 I e aotNan1.NW_018505377v1 352564 0 - 4471408 C a score=42.000000 s hg38.chr19_GL383574v1_alt 61499 2 + 155864 -AC s panTro5.chr19 36130138 2 + 61309027 -AC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876259 2 + 64411610 -AC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293929 2 - 8369475 -AC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886545 2 - 106955855 -AC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198296 2 + 53671032 -GT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652043 2 + 59248254 -GT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518630 2 - 13342542 -GT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449086 2 + 7714307 -GT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261065 2 + 50890351 -GT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879925 2 - 2385121 -GT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315202 2 + 4274983 -GT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549932 2 + 49145316 -AC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393953 2 + 8899380 -AC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603284 2 - 2680843 -AC i cebCap1.NW_016107633v1 C 0 C 0 s mm10.chr7 111081853 2 - 145441459 -AC i mm10.chr7 C 0 I 1436 s dasNov3.JH563638 309381 2 + 643850 AG- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e otoGar3.GL873654 5467031 87 + 5549422 I e canFam3.chr1 4604137 0 - 122678785 C e aotNan1.NW_018505377v1 352564 0 - 4471408 C a score=49899.000000 s hg38.chr19_GL383574v1_alt 61501 5 + 155864 CCCAt s panTro5.chr19 36130140 5 + 61309027 CCCAt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876261 5 + 64411610 CCCAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293931 5 - 8369475 CCCAt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886547 5 - 106955855 CCCAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198298 5 + 53671032 CCCGt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652045 5 + 59248254 CCCGt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518632 5 - 13342542 CCCGt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449088 5 + 7714307 CCCAt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261067 5 + 50890351 CCCAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879927 5 - 2385121 CCCAt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315204 5 + 4274983 CCCAt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549934 5 + 49145316 CCCAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393955 5 + 8899380 CCCAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603286 5 - 2680843 CCCAT i cebCap1.NW_016107633v1 C 0 C 0 s dasNov3.JH563638 309383 5 + 643850 CCCAT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e otoGar3.GL873654 5467031 87 + 5549422 I e mm10.chr7 111081855 1436 - 145441459 I e canFam3.chr1 4604137 0 - 122678785 C e aotNan1.NW_018505377v1 352564 0 - 4471408 C a score=9680.000000 s hg38.chr19_GL383574v1_alt 61506 2 + 155864 t--------------t s panTro5.chr19 36130145 2 + 61309027 t--------------t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876266 2 + 64411610 T--------------t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293936 2 - 8369475 t--------------t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886552 16 - 106955855 TTTTCGTTTTGGCTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198303 2 + 53671032 t--------------t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652050 2 + 59248254 t--------------t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518637 2 - 13342542 t--------------t i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449093 2 + 7714307 t--------------t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261072 2 + 50890351 T--------------T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879932 2 - 2385121 t--------------t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315209 2 + 4274983 t--------------t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549939 2 + 49145316 T--------------T i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5393960 2 + 8899380 C--------------T i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603291 2 - 2680843 T--------------T i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5467118 2 + 5549422 T--------------T i otoGar3.GL873654 I 87 C 0 s dasNov3.JH563638 309388 2 + 643850 T--------------T i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e mm10.chr7 111081855 1436 - 145441459 I e canFam3.chr1 4604137 0 - 122678785 C e aotNan1.NW_018505377v1 352564 0 - 4471408 C a score=76902.000000 s hg38.chr19_GL383574v1_alt 61508 9 + 155864 tttg------ttttg s panTro5.chr19 36130147 9 + 61309027 tttg------ttttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876268 9 + 64411610 tttg------ttttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293938 9 - 8369475 tttg------ttttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886568 9 - 106955855 TTTG------TTTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198305 9 + 53671032 tttg------ttttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652052 9 + 59248254 tttg------ttttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518639 9 - 13342542 tttg------ttttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449095 9 + 7714307 tttg------ttttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261074 9 + 50890351 TTTG------TTGTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879934 9 - 2385121 tttg------ttttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315211 9 + 4274983 tttg------ttttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549941 9 + 49145316 TTGG------TTTTG i calJac3.chr22 C 0 I 31 s saiBol1.JH378197 5393962 9 + 8899380 TTGG------TTTTG i saiBol1.JH378197 C 0 I 19 s cebCap1.NW_016107633v1 1603293 9 - 2680843 TTGG------TTTTG i cebCap1.NW_016107633v1 C 0 I 31 s otoGar3.GL873654 5467120 15 + 5549422 CTTGCTGGTCtttta i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e dasNov3.JH563638 309390 0 + 643850 C e mm10.chr7 111081855 1436 - 145441459 I e canFam3.chr1 4604137 0 - 122678785 C e aotNan1.NW_018505377v1 352564 0 - 4471408 C a score=125883.000000 s hg38.chr19_GL383574v1_alt 61517 21 + 155864 gctcttttatatttgta-tttt---- s panTro5.chr19 36130156 21 + 61309027 gctcttttatttttgta-tttt---- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876277 21 + 64411610 gctcttttatttttgta-tttt---- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293947 21 - 8369475 gctcttttatttttgta-tttt---- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886577 22 - 106955855 GCTCttttgtttttgtattttt---- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198314 21 + 53671032 gctcttttatttttgta-tttt---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652061 21 + 59248254 gctcttttatttttgta-tttt---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518648 21 - 13342542 gctcttttatttttgta-tttt---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449104 21 + 7714307 gttcttttatttttgta-tttt---- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261083 21 + 50890351 GCTCttttatttttgtg-tttt---- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879943 21 - 2385121 gctcttttatttttgta-tttt---- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315220 21 + 4274983 gctcttttatttttgta-tttt---- i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5393990 21 + 8899380 CCTCCCCCCtttttttt-tttc---- i saiBol1.JH378197 I 19 I 3 s otoGar3.GL873654 5467135 21 + 5549422 ----ttttttttttatt-tttttttt i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e dasNov3.JH563638 309390 0 + 643850 C e mm10.chr7 111081855 1436 - 145441459 I e canFam3.chr1 4604137 0 - 122678785 C e aotNan1.NW_018505377v1 352564 0 - 4471408 C e cebCap1.NW_016107633v1 1603302 31 - 2680843 I e calJac3.chr22 28549950 31 + 49145316 I a score=1905254.000000 s hg38.chr19_GL383574v1_alt 61538 203 + 155864 -ttgagacagagtctagttttgtcacccaggctgga-tgcagtggaccgatctcggctcactac-aa------cctctgcctcccaggctcaagcaatccacccacttcagcccc-------ctgagtagctggggttacaggcatgtgccaccacacctggctaatttttg--tattttttttgtagagacaggctttcgccatgttgttcaggctggtc s panTro5.chr19 36130177 203 + 61309027 -ttgagacagagtctagctttgtcacccaggctgga-tgcagtggaccgatctcggctcactac-aa------cctctgcctcccaggctcaagcaatccacccacttcagcccc-------ctgagtagctgaggttacaggcatgtgccaccacacctggctaatttttg--tattttttttgtagagacaggctttcgccatgttgttcaggctggtc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876298 203 + 64411610 -ttgagacagagtctagctttgtcacccaggctgga-tgcagtggaccgatctcggctcactac-aa------cctctgcctcccaggctcaagcaatccacccacttcagcccc-------ctgagtagctgaggttacaggcatgtgccaccacacctggctaatttttg--tattttttttgtagagacaggctttcgccatgttgttcaggctggtc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6293968 204 - 8369475 -ttgagacagagtctagctttgtcaccccggctgga-tgcggtggaccgatctcggctcactac-aa------cctctgcctcccaggctcaagcaatccacccacttcagcccc-------ctgagtagctggggttacaggcatgtgccaccacacctggctaatttttggtttttttttttgtagagacaggctttcgccatgttgttcaggctgg-c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886599 209 - 106955855 -ttgagacagggtctagctttgtcacccaggctgga-tgcagtggaccaatcttggctcactac-aa------cctctgcctcccaggctccagcgatccacccacttgagcccccgagtagctgagtagctggggttacaggcatgtgccaccacacctggctaatttttg--ta-tatttttgtagagacaggctttcgccatcttgttcaggctggtc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198335 201 + 53671032 -ttgagacagggtctagctttgtcacccagactgga-tgcagtggaccaatctcggctcactac-aa------ccagtgcctccctggctcaagtgatccacccacttcagcctc-------ctgagtagctggggttacaggcatgtgccaacacgcctggctaatttttg--ta--tttgttgtagacacaggctttcgccgtgttgtccaggctgatc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652082 201 + 59248254 -ttgagacagggtctagctttgtcacccagactgga-tgcagtggaccaatctcggctcactac-aa------ccagtgcctccctggctcaagcgatccacccacttcagcctc-------ctgagtagctggggttacaggcatgtgccaacacgcctggctaatttttg--ta--tttgttgtagacacaggctttcgccgtgttgtccaggctggtc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518669 201 - 13342542 -ttgagacagggtctagctttgtcacccagactgga-tgcagtggaccaatctcggctcactac-aa------ccagtgcctccctggctcaagcgatccacccacttcagcctc-------ctgagtagctggggttacaggcatgtgccaacacgcctggctaatttttg--ta--tttgttgtagacacaggctttcgccgtgttgtccaggctggtc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449125 201 + 7714307 -ttgagacagggtctagctttgtcacccagactgga-tgcagtggaccaatctcggctcactac-aa------ccagtgcctccctggctcaagcgatccacccacttcagcctc-------ctgagtagctggggttacaggcatgtgccaacacgcctggctaatttttg--ta--tttgttgtagacacaggctttcgccgtgttgtccaggctggtc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261104 201 + 50890351 -ttgagatagggtctagctttgtcacccagagtgga-tgcagtggaccaatctcggctcactac-aa------cctctgcctcccgggctcaagcgatccacccacttcagcctc-------ctgagtagctggggttacaggcatgtgccaacacgcctggctaatttttg--ta--ttttttgtagacacaggctttcgccatgttgtccaggctggtc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 879964 201 - 2385121 -ttgagacagggtctagctttgtcacgcagactgta-tgcagtggaccaatctcggctcactac-aa------cctctgcctccctggctcaagcgatccacccacttcagcctc-------ctgagtagctggggttacaggcatgtgccaacacgcctggctaatttttg--ta--tttgttgtagacacacgctttcgccgtgttgtccaggctggtc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315241 201 + 4274983 -ttgagacaaggtctagctttgtcacccagactgga-tgcagtggaccaatctcggctcactac-aa------cctctgcctcccgggctcaagcgatccacccacttcagcctc-------ctgagtagctggggttacaggcatgtgccaccacgcctggataatttttg--ta--ttttttgtagagacaggctttcgccatgttgtccaggctggac i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28549981 206 + 49145316 -ttgagaccaggtctagctttgtcgcccaggctaga-tgcagtggatcgatctcaggtcacggc-aactctgccctctgcctcccgggctcaagtaattcactcacttcagcctt-------ctaaatagctggggttataggcatatgccaccacgcctggctaatatttg--ca--ttttttgtagagacaggc-tttgtcacgttgcccaggctggtc i calJac3.chr22 I 31 C 0 s saiBol1.JH378197 5394014 178 + 8899380 -ttgagacagagtctagctttgtcgcccaggctaga-tgcagtggata------------------------------gtctcccaggctcaagtgattttcccacttcagcctt-------ctaaatagctggggttacaggcgtatgccaccacacctggctaatttttg--ca--ttttttatagagacaggcttttgtcacgttgcccaggctggtc i saiBol1.JH378197 I 3 C 0 s cebCap1.NW_016107633v1 1603333 207 - 2680843 -ttgagacagggtctagctttgtcacccaagctaga-tgcagtggatcaatctcaggtcgctgc-aactctgccctctgcctcccaggctcaagtaatccacccacttcaacctt-------ctaaatagctggggttgcaggcagatgccaccacacctggctaatttttg--ca--ttttttgtagagacaggcttttgtcaggttgcccaggctggtc i cebCap1.NW_016107633v1 I 31 C 0 s aotNan1.NW_018505377v1 352564 207 - 4471408 --tgagacagggtctagctttgtcgcccaggctaga-tgcaatggatcgatctcgggtcgctgcaaactctgccctctgcctccctggttcaagttatccacccacttcagcctt-------ctaaacagctggggttacaggcatatgccaccacacctggctaatttttg--ca--ttttttggagagacaggcttttgtcacgttgtccagactggtc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5467156 185 + 5549422 tttgagacagagcctcaagctgtccccctgggtagagtgccgtggc---attacagctcacagc-aa------cctccaactcctgggctcaagcgagtctcctgcctccgcctc-------ccaagtagctgggaccacaggcgcccgccacaacgcccggccattttttg--gt-------tgcag----------ccgtcattgttgtctggcgggtc i otoGar3.GL873654 C 0 T 310 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e dasNov3.JH563638 309390 0 + 643850 C e mm10.chr7 111081855 1436 - 145441459 I e canFam3.chr1 4604137 0 - 122678785 C a score=825523.000000 s hg38.chr19_GL383574v1_alt 61741 81 + 155864 tcgaactcctgagctcaagcgatctgcccatctcagcctcccaaattgctgggattataggtgtgagcaaccgcgcccagc s panTro5.chr19 36130380 81 + 61309027 tcgaactcctgagctcaagtgatctgcccacctcagcctcccaaattgctgggattataggtgtgagcaaccgcgcccagc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876501 81 + 64411610 tcgaactcctgagctcaagcgatctgcccacctcagcctcccaaattgctgggattataggtgtgagcaaccgcgcccagc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294172 81 - 8369475 tcgaactcctgagctcaagcgatctgcccacctaagcctcccaaattgctgggattataggtgtgagcaaccgcgcccagc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886808 81 - 106955855 tcgaactcctgagctcaagcgttctgcccacctcagcctcccaaattgctgggattataggtgtgagcacccacgcccagc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198536 81 + 53671032 tcgaactcctgagctcaagtgatctgcccacctcagcctcccaaattgctgggattataggtgtgagcaaccgcgcccagc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652283 81 + 59248254 tcgaactcctgagctcaagtgatctgcccacctcagcctcccaaattgctgggattataggtgtgagcaaccgcgcccagc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518870 81 - 13342542 tcgaactcctgagctcaagtgatctgcccacctcagcctcccaaattgctgggattataggtgtgagcaaccgcgcccagc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449326 81 + 7714307 tcgaactcctgagctcaagtgatctgcccacctcaacctcccaaattgctgggattataggtgtgagcaaccgcgcccagc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261305 81 + 50890351 tcgaactcctgagctcaagtgatctgcccacctcagcctcccaaattgctgggattataggtgtgagcaaccgcgcccagc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 880165 81 - 2385121 tcgaactcctgagctcaagtgatctgcccacctcagcctcccaaattgctgggattataggtgtgagcaaccgcgcccagc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315442 80 + 4274983 tcaaactcctgagctcaagtgatct-cccacctcagcctcccaaattgttgggattataggtgtgagcaactgcacccagc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28550187 81 + 49145316 ttgaactcctgagctcaagtgagccatccaccccggcctcccaaagtgctgggattataggtgtgagcaaccacgcccAAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5394192 81 + 8899380 ttcaactcctgagctcaagtgagccacccaccccagcctcccaaagtgctgggattataggtgtgagcaaccacacccagc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603540 81 - 2680843 ttgaactcctgagctcaaatgaaccacccactctggcctcccaaattgctgggattataggtgtgagcagcctcgcccagc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 352771 81 - 4471408 ttgaactcctgagctcaagtgagccacccaccccggcctcccaaagtgctgggattataggtgtgagcaaccacacccagc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 565567 590 + 2501019 I e micMur3.chr22 3948926 576 - 30143674 I e dasNov3.JH563638 309390 0 + 643850 C e otoGar3.GL873654 5467341 310 + 5549422 T e mm10.chr7 111081855 1436 - 145441459 I e canFam3.chr1 4604137 0 - 122678785 C a score=38845.000000 s hg38.chr19_GL383574v1_alt 61822 3 + 155864 cAA s panTro5.chr19 36130461 3 + 61309027 cAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876582 3 + 64411610 cAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294253 3 - 8369475 cAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886889 3 - 106955855 cAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198617 3 + 53671032 cAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652364 3 + 59248254 cAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518951 3 - 13342542 cAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449407 3 + 7714307 cAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261386 3 + 50890351 cAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 880246 3 - 2385121 cAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315522 3 + 4274983 cAA i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5394273 3 + 8899380 TAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603621 3 - 2680843 cAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 352852 3 - 4471408 cAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3949502 3 - 30143674 CAA i micMur3.chr22 I 576 C 0 s proCoq1.NW_012149263v1 566157 3 + 2501019 CAA i proCoq1.NW_012149263v1 I 590 C 0 s otoGar3.GL873654 5467031 3 + 5549422 CAA i otoGar3.GL873654 T 310 C 0 e dasNov3.JH563638 309390 0 + 643850 C e mm10.chr7 111081855 1436 - 145441459 I e canFam3.chr1 4604137 0 - 122678785 C e calJac3.chr22 28550268 0 + 49145316 C a score=115533.000000 s hg38.chr19_GL383574v1_alt 61825 9 + 155864 ACCCCATAT s panTro5.chr19 36130464 9 + 61309027 ACCCCATAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876585 9 + 64411610 ACCCCATAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294256 9 - 8369475 ACCCCATAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886892 9 - 106955855 ACCCCATAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198620 9 + 53671032 ACCCCATAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652367 9 + 59248254 ACCCCATAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518954 9 - 13342542 ACCCCATAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449410 9 + 7714307 ACCCCATAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261389 9 + 50890351 ACCCCATAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 880249 9 - 2385121 ACCCCATAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315525 9 + 4274983 ACCCCATAT i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5394276 9 + 8899380 TTCCCGTAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603624 9 - 2680843 ACCCCGTAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 352855 9 - 4471408 ACCCTGTGT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3949505 9 - 30143674 ACCCCATAT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 566160 9 + 2501019 ACCCAATAT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5467034 9 + 5549422 GCCCCATAC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4604137 9 - 122678785 AACTCATAT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 309390 0 + 643850 C e mm10.chr7 111081855 1436 - 145441459 I e calJac3.chr22 28550268 0 + 49145316 C a score=1048685.000000 s hg38.chr19_GL383574v1_alt 61834 76 + 155864 TAAGCAAAAACTTGCCAAGAGATCTTTT-AAAAGGCAAGGAATGAGTATGGCTACTGTGTAA-TTATCTGAAGGGttt s panTro5.chr19 36130473 76 + 61309027 TAAGCAAAAACTTGCCAAGAGTTCTTTT-AAAAGGCAAGGAATGAGTATGGCTACTGTGTAA-TTATCTGAAGGGttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876594 75 + 64411610 TAAGCAAAAACTTGCCAAGAGTTCTTTT-AAAAGGCAAGGAATGAGTATGGCTACTGTGTAA-TTATCTGAAGGG-tt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294265 76 - 8369475 TAAGCAAAAACTTGCCAAGAGATCTTTT-AAAAGGCAAGGAATGAGTATGGCTACTGTGTAA-TTATCTGAAGGGttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886901 74 - 106955855 TAAGCAAAAACTTGCCAAGAGATCTTTT-AAAAGGCAAGGAATGAGTATGGCTACCGTGTAA-TTATCTGAAGGg--t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198629 76 + 53671032 TAAGCAAAAACTTGCCAAGTGATCTTTT-AAAAGGCAAGGAATGAGTATGGCTACTGTGTAA-TTATCTGAAGAGttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652376 76 + 59248254 TAAGCAAAAACTTGCCAAGTGATCTTTT-AAAAGGCAAGGAATGAGTATGGCTACTGTGTAA-TTATCTGAAGAGttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4518963 76 - 13342542 TAAGCAAAAACTTGCCAAGTGATCTTTT-AAAAGGCAAGGAATGAGTATGGCTACTGTGTAA-TTATCTGAAGAGttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449419 76 + 7714307 TAAGCAAAAACTTGCCAAGTGATCTTTT-AAAAGGCAAGGAATGAGTATGGCTACTGTGTAA-TTATCTGAAGAGttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261398 76 + 50890351 TAAGCAAAAACTTGCCAAGTGATCTTTT-AAAAGGCAAGGAATGAGTATGGCTACTGTGTGA-TTATCTGAAGAGTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 880258 76 - 2385121 TGAGCAAAAACTTGCCAAGTGATCTTTT-AAAAGGCAAGGAATGAGTATGGCTACTGTGTAA-TTATCTGAAGAGttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315534 76 + 4274983 TAAGCAAAAACTTGCCAAGTGATTTTTT-AAAAGGCAAGGAATGAATATGGCTACTGTGTCA-TTATCTGAAGAGttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28550268 38 + 49145316 ---------------------------------------GAATGAGTATGGCTATTGTGTAA-TTATCTGAAGGATTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5394285 75 + 8899380 TAAGCAAAAACTTGCTAAGAGATCTCTTCAAAAGGCAAGGAATGAGTATGGCTACTGTG--A-TTATCTGAAGGAttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603633 77 - 2680843 TAAGCAAAAACTTGCTAAGAGATCTTTTCAGAAGGCAGGGAATGAGTATGGCTACTGTGTAA-TTATCTGAAGGATTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 352864 77 - 4471408 TAAGCAAAAACTTGCTAAGAGATCTTTTCAAAAGGCAAAGAATGAGTATGGCTACTGTGTAA-TTATCTGAAGGATTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3949514 77 - 30143674 TAAGCCAGAATTTGTCAAGAAATCTTTC-GAAAGTCAAGGAATGAATCTGGCAACTGTGTAATTTATCTGAAGGGTTT i micMur3.chr22 C 0 I 5 s proCoq1.NW_012149263v1 566169 77 + 2501019 TAAGCCAAAACTTGCCAAGAGATCTTTT-AAAAGTCAAGGAATGAGTCTGCCTACTGCGTAATTTATCTGAAGGATTT i proCoq1.NW_012149263v1 C 0 I 5 s otoGar3.GL873654 5467043 77 + 5549422 TAAGCCAAAATTTGCCAAGAGATCTTTC-AAATGTCCAGAAATCAGTCCAGCTACTGTGTAATTTATCTGAAGAGTTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4604146 75 - 122678785 TAAGCAAAGGCTT-CCAAAAGATCTTCC-AAATGGCCAGAAATGAATATAGCTACTGTGTAA-TAATCTGAAGGGTGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 309390 69 + 643850 TAAGC-AAAACTTGCCAAGAAATCTTTC-AAATGACAAGG-ATGGTTATGGCTATTGTGTAA-TCATCTGAAG----- i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111081855 1436 - 145441459 I a score=-40965.000000 s hg38.chr19_GL383574v1_alt 61910 36 + 155864 ttt---ttgtttgttttttggttttgtttgtttg-ttttt s panTro5.chr19 36130549 36 + 61309027 ttt---ttgtttgttttttggttttgtttgtttg-ttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876669 36 + 64411610 ttt---ttgtttgttttttggttttgtttgtttg-ttttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294341 37 - 8369475 ttt---ttgtttgttttttggttttgtttgtttgtttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63886975 36 - 106955855 ttt---ttgtttgttttttggttttgtttgtttg-tttgt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198705 34 + 53671032 tgt---ttttttgtttttt-tttgtttttgttt--ttgtt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652452 33 + 59248254 tg----ttttttggttttt-tttgtttttgttt--ttgtt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519039 33 - 13342542 tg----ttttttgggtttt-tttgtttttgttt--ttgtt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449495 34 + 7714307 tgt---tttttggtttttt-tttgtttttgttt--ttgtt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261474 37 + 50890351 TGtttgtttttcgggtttt-tttgtttttgttt--ttgtt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 880334 37 - 2385121 tgttttttgtttttttgtt-tttgtttttgttt--ttgtt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315610 35 + 4274983 tgt---ttgtttgttttttgggtttttttgttt--ttgtt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28550306 10 + 49145316 T--------------TTTT----------------TTTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5394360 20 + 8899380 ttt---ttcttt-tctttt----------------ttttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603710 10 - 2680843 T--------------TTTT----------------TTTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 352941 11 - 4471408 TT-------------TTTT----------------TTTTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5467120 3 + 5549422 ----------------CTT--------------------- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4604221 5 - 122678785 -------------------------ATTTG---------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 309459 10 + 643850 ---CAGTTATTTG--------------------------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 566246 5 + 2501019 I e micMur3.chr22 3949591 5 - 30143674 I e mm10.chr7 111081855 1436 - 145441459 I a score=272088.000000 s hg38.chr19_GL383574v1_alt 61946 22 + 155864 ttGCTGGCCTTTTAGTTTTTAT s panTro5.chr19 36130585 22 + 61309027 ttGCTGGCCTTTTAGTTTTTAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876705 22 + 64411610 ttGCTGGCCTTTTAGTTTTTAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294378 22 - 8369475 ttGCTGGCCTTTTAGTTTTTAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887011 22 - 106955855 ttgCTGGCCTTTTAGTTTTTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198739 20 + 53671032 ttgctggcgttttagtttt--t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652485 20 + 59248254 ttgctggcgttttagtttt--t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519072 20 - 13342542 ttgctggcgttttagtttt--t i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449529 20 + 7714307 ttgctggcattttagtttt--t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261511 20 + 50890351 ttgctggcgttttagtttt--t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 880371 20 - 2385121 ttgctggcgttttagtttt--t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315645 22 + 4274983 ttGCTGGCGTTTTAGTTTTTAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28550316 22 + 49145316 TTGCTGGCCTTCTAGTTATTAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5394380 22 + 8899380 ttGCTGGCCTTCTAGTTATTGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603720 22 - 2680843 TTTCTGGCCTTCTAGTTATTAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 352952 22 - 4471408 TTGCTGGCCTTCTAGTTATTAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3949596 22 - 30143674 TTGCTGGCCTTTTAGATTTTAT i micMur3.chr22 I 5 C 0 s proCoq1.NW_012149263v1 566251 22 + 2501019 TTGCTGGCCTTTCAGATTTTAT i proCoq1.NW_012149263v1 I 5 C 0 s otoGar3.GL873654 5467123 20 + 5549422 --GCTGGTCttttatttttttt i otoGar3.GL873654 C 0 I 293 s canFam3.chr1 4604226 22 - 122678785 TTGCTGGCCTTTGAGTATTGTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 309469 22 + 643850 TTGCTGGTCTTTTAGTATTGCT i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111081855 1436 - 145441459 I a score=724155.000000 s hg38.chr19_GL383574v1_alt 61968 52 + 155864 GTTTAATTACCCAAGCCCCTAAAGCATT-AAAGAACTTCACCTATCTAACTTT s panTro5.chr19 36130607 48 + 61309027 GTTTAATTACCCAAGCCCCTAAAGCATT-AAAGAACTTCAC----CTAACTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876727 48 + 64411610 GTTTAATTACCCAAGCCCCTAAAGCATT-AAAGAACTTCAC----CTAACTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294400 52 - 8369475 GTTTAATTACCCAAGCCCCTAAAGCATT-AAAGAACTTCACCTATCTAACTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887033 52 - 106955855 GTCTAATTATCCAAGCCCCTAAAGCATT-AAAGAACTTCACTTATCTAACTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198759 52 + 53671032 gtttAGTTACCCAAGCCCCTAAAGCATT-AAAGAACTTCACCTGTCTAACTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652505 52 + 59248254 gtttagttACCCAAGCCCCTAAAGCATT-AAAGAACTTCACCTGTCTAACTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519092 52 - 13342542 gtttAGTTACCCAAGCCCCTAAAGCATT-AAAGAACTTCACCTGTCTAACTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449549 52 + 7714307 gtttAGTTGCCCAAGCCCCTAAAGCATT-AAAGAACTTCACCTGTCTAACTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261531 48 + 50890351 gtttAGTTACCCAAGCCCCTAAAGCATT-AAAGAACTTCAC----CTAACTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 880391 52 - 2385121 gtttAGTTACCCAAGCCCCTAAAGCATT-AAAGAACTTCACCTGTCTAACTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315667 48 + 4274983 ATTTAGTTACCCAAGCCCCTAAAGCATT-AAAGAACTTCAC----CTAACTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28550338 51 + 49145316 GTTTAATTACCCAAGCCCCTAAGGCATT-AAAGAACTTCACCTACCTAAC-TT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5394402 51 + 8899380 GTCTAATTACCCAA-CCCCTAACGCATT-AAAGAACTTCACCTACCTAACTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603742 51 - 2680843 GTTTAATTACCCAA-GCCCTAAGGCATT-AAAGAACTTCACCTACCTAACTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 352974 52 - 4471408 GTTTAATTACCCAAGCCCCTAAGGCATT-AAAGAACTTCACCTACCTAACTTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3949618 52 - 30143674 GTTTAATTATGCAAACTCCTAAGGTATC-AAAGAACTTCACCTACCTTACTTA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 566273 52 + 2501019 GTTTAATTCCGCAAACCCCTAAGGTATC-AAAGAACTTCACCTACCTTACTTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5467436 53 + 5549422 GTTTAATGACCCAAGCCCCTAAGATATCAAAAGTACTTCACCAACCTTAGTTT i otoGar3.GL873654 I 293 C 0 s canFam3.chr1 4604248 52 - 122678785 GTATAATTGCCCAAGCCCCTAAGGTATT-GAAGGACTTCACCTGTCTAACTTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 309491 44 + 643850 ----GTTTACGCAATTCCCTGTGGTAAT-AAAGA----CACCTGTCTAACTTT i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111081855 1436 - 145441459 I a score=79176.000000 s hg38.chr19_GL383574v1_alt 62020 6 + 155864 GTAGTT s panTro5.chr19 36130655 6 + 61309027 GTAGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876775 6 + 64411610 GTAGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294452 6 - 8369475 GTAGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887085 6 - 106955855 CTAGtt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198811 6 + 53671032 CTAGTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652557 6 + 59248254 CTAGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519144 6 - 13342542 CTAGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449601 6 + 7714307 CTAGTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261579 6 + 50890351 CTAGTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 880443 6 - 2385121 CTAGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315715 6 + 4274983 CTAGTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28550389 6 + 49145316 GTAGtt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5394453 6 + 8899380 GTAGtt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603793 6 - 2680843 GTAGtt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 353026 6 - 4471408 GTAGtt i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3949670 6 - 30143674 CTAGTT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 566325 6 + 2501019 CTATTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5467489 6 + 5549422 CTGGTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4604300 6 - 122678785 CTAGTT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 309535 0 + 643850 C e mm10.chr7 111081855 1436 - 145441459 I a score=-13535.000000 s hg38.chr19_GL383574v1_alt 62026 4 + 155864 CTtt- s panTro5.chr19 36130661 4 + 61309027 CTtt- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876781 4 + 64411610 CTtt- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294458 4 - 8369475 CTtt- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887091 4 - 106955855 cttt- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198817 3 + 53671032 C-TT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652563 3 + 59248254 C-TT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519150 3 - 13342542 C-TT- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449607 3 + 7714307 C-TT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261585 3 + 50890351 C-TT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 880449 3 - 2385121 C-TT- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315721 3 + 4274983 C-TT- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28550395 3 + 49145316 t-tt- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5394459 3 + 8899380 t-tt- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603799 3 - 2680843 t-tt- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 353032 3 - 4471408 t-tt- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3949676 4 - 30143674 -CTTT i micMur3.chr22 C 0 I 212 s otoGar3.GL873654 5467495 4 + 5549422 -CTTT i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 566331 0 + 2501019 C e dasNov3.JH563638 309535 0 + 643850 C e mm10.chr7 111081855 1436 - 145441459 I e canFam3.chr1 4604306 0 - 122678785 C a score=3560.000000 s hg38.chr19_GL383574v1_alt 62030 1 + 155864 -t s panTro5.chr19 36130665 1 + 61309027 -t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876785 1 + 64411610 -t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294462 1 - 8369475 -t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887095 1 - 106955855 -t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198820 1 + 53671032 -T i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652566 1 + 59248254 -T i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519153 1 - 13342542 -T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449610 1 + 7714307 -T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261588 1 + 50890351 -T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 880452 1 - 2385121 -T i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315724 1 + 4274983 -T i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28550398 1 + 49145316 -t i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5394462 1 + 8899380 -t i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603802 1 - 2680843 -t i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 353035 1 - 4471408 -t i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5467499 1 + 5549422 A- i otoGar3.GL873654 C 0 T 357 e proCoq1.NW_012149263v1 566331 0 + 2501019 C e micMur3.chr22 3949680 212 - 30143674 I e dasNov3.JH563638 309535 0 + 643850 C e mm10.chr7 111081855 1436 - 145441459 I e canFam3.chr1 4604306 0 - 122678785 C a score=-22536.000000 s hg38.chr19_GL383574v1_alt 62031 23 + 155864 actttattt-----attta-tttatttat s panTro5.chr19 36130666 17 + 61309027 actttact------------ttactttat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876786 26 + 64411610 actttacttta---ctttactttatttat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294463 28 - 8369475 actttactttatttattta-tttatttat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887096 8 - 106955855 actttatt--------------------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198821 13 + 53671032 ACtt----------------tttatttat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652567 13 + 59248254 ACtt----------------tttatttat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519154 13 - 13342542 ACtt----------------tttatttat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449611 13 + 7714307 ACtt----------------tttatttat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261589 13 + 50890351 ACTt----------------tttatttat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 880453 13 - 2385121 ACtt----------------tttatttat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315725 13 + 4274983 ACTt----------------tttatttat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28550399 2 + 49145316 ac--------------------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5394463 2 + 8899380 ac--------------------------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603803 2 - 2680843 ac--------------------------- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 353036 3 - 4471408 act-------------------------- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 566331 0 + 2501019 C e micMur3.chr22 3949680 212 - 30143674 I e dasNov3.JH563638 309535 0 + 643850 C e otoGar3.GL873654 5467500 357 + 5549422 T e mm10.chr7 111081855 1436 - 145441459 I e canFam3.chr1 4604306 0 - 122678785 C a score=2819805.000000 s hg38.chr19_GL383574v1_alt 62054 289 + 155864 tta----tttatttatttatgagacagggccttgctctgtcacctaggctagagtgcagtggcacaatctcggctcactgcagcttctgcctcccgggttcaagc---tatcccatctcagcctcctgagtagctgggaacacaggcacgcgccaccacgcctggctaatttttg--------------tattttcagtagagacagggtt------------tcgccatgttg------------------cctaggctggtcttgaaatcctgggctcaagc---------gatcctcctgcttcagcctcccaaaggactaggattacaggcatatgccactgcgc s panTro5.chr19 36130683 289 + 61309027 tta----tttatttatttatgagacagggccttgctctgtcacctaggctagagtgcagtggcacaatctcggctcactgcagcctctgcctcccgggttcaagc---tatcccatctcagcctcctgactagctgggaacacaggcacgcgccaccacgcctggctaatttttg--------------tattttcagtagagacagggtt------------tcgccatgttg------------------cctaggctggtcttgaaatcgtgggctcaagc---------gatcctcctgcttcagcctcccaaaggactaggattacagacatatgccactgcgc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39876812 289 + 64411610 tta----tttatttatttatgagacagggccttgctctgtcacctaggctagagtgcagtggcacaatctcggctcactgcagcctctgcctcccgggttcaagc---tatcccatctcagcctcctgactagctgggaacacaggcacgcgccaccacgcctggctaatttttg--------------tattttcagtagagacagggtt------------tcgccatgttg------------------cctaggctggtcttgaaatcgtgggctcaagc---------gatcctcctgcttcagcctcccaaaggactaggattacagacatatgccactgcgc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294491 289 - 8369475 tta----tttatttgtttatgagacagggctttgctctgtcacctaggctagagtgcagtggcacaatcttggctcactgcagcctctgcctcctgggttcaagc---tatcccatctcagcctcctgagtagctgggaacacaggcacgcgccaccacgcctggctaatttttg--------------tattttcagtagagacagagtt------------tcgccatgttg------------------cctaggctggtcttgaaatcctgggctcaagc---------gatcctcctgcttcagcctcccaaaggactaggattacaggcatatgccactgcgt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887104 288 - 106955855 -ta----tttatttatttatgagacagggcctcgctctgtcacctaggctggagtgcagtggcacgatctcagctcactgcagcctctgcctcgcaggttcaagc---tatcccatctcagcctcctgagtagctgggaacacaggcacgtgccaccacgcctggctaatttttg--------------tattttcagtagagacagggtt------------tcaccatgttg------------------cctagactggtcttgaaatcccgggctcaagc---------ggtcctcctgcttcagcctcccaaaagactaggattataggcatgtgccactgcgc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30198834 289 + 53671032 tta----tttatttatttttgagacagggcctcactctgtcacctacgctggagtgcaatggcacgatcttggctcactgcagcctctgcctcccgggttcaagc---tatcccatctcagcctcctgagtagctgggaacacaggcacacgccaccatgcctggctgatttttg--------------tattttcagtagagacagggtt------------tcaccatgtta------------------cctagactggtcttgaaatccagggctcaagc---------gatcctcctgctttagcttcccaaagtactaggattacaggcatgtgccaccgctt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652580 289 + 59248254 tta----tttatttatttttgagacagggcctcactctgtcacctacgctggagtgcaatggcacgatcttggctcactgcagcctctgcctcccgggttcaagc---tatcccatctcagcctcctgagtagctgggaacacaggcacacgccaccatgcctggctgatttttg--------------tattttcagtagagacagggtt------------tcaccatgtta------------------cctagactggtcttgaaatccagggctcaagc---------gatcctcctgctttagcttcccaaagtactaggattacaggcatgtgccaccgctt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519167 289 - 13342542 tta----tttatttatttttgagacagggcctcactctgtcacctacgctggagtgcaatggcacgatcttggctcactgcagcctctgcctcccaggttcaagc---tatcccatctcagcctcctgagtagctgggaacacaggcacacgccaccatgcctggctgatttttg--------------tattttcagtagagacagggtt------------tcaccatgtta------------------cctagactggtcttgaaatccagggctcaagc---------gatcctcctgctttatcttcccaaagtactaggattacaggcatgtgccaccgctt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449624 289 + 7714307 tta----tttatttatttttgagacagggcctcactctgtcacctacgctggagtgcaatggcacgatcttggctcactgcagcctctgcctcccgggttcaagc---tatcccatctcagcctcctgagtagctgggaacacaggcacacgccaccatgcctggctgatttttg--------------tattttcagtagagacagggtt------------ttaccatgtta------------------cctagactggtcttgaaatccagggctcaagc---------aatcctcctgctttagcttcccaaagtactaggattacaggcatgtgccaccgctc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261602 285 + 50890351 ttatttgtttatttatttttgagacagggcctcactctgtcacctacgctggagtgcaacagcacgatctcggctcactgcagcctctgcctcccgggttcaagc---tatcccatctcagcctcctgagtagctgggaacacaggcacgcgccaccatgcctggctgatttttg--------------tattttcggtagagacagggtt------------tcaccatgtta------------------cctagactggtcttgaaatccagggctcaagc---------gatcctcctgctttagcctcccaaagtact--------aggcatgtgccaccactc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 880466 289 - 2385121 tta----tttatttatttttgagacagggcctcactctgtcacctacgctggagtgcaatggcacgatcttggctcactgcagcctctgcctcccgggttcaagc---tatcccatctcagccttctgagtagctgggaacacaggcacacgccaccatgcctggctgatttttg--------------tattttcagtagagacagggtt------------tcaccatgtta------------------cctagactggtcttgaaatccagggctcaagc---------gatcctcctgctttagcctcccaaagtactaggattacaggcatgtgccaccgctc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2315738 293 + 4274983 ttgtttgtttgtttgtttttgagacagggcctcgctctgtcagctacgctggagtgcaacggcacgatctcggctcactgcagcctcagcctcctgggttcaagc---tatcccatgtcagcctcctgagtagctgggaacacaggcacgcgccaccatgcgtggctgatttttg--------------tattttcggtagagacagggtt------------tcaccatgttg------------------cctaggctggtcttgaaatccagggctcaagc---------gatcctcctgctttagcctcccaaagtactaggattacaggcatgtgccaccgctc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28550401 274 + 49145316 ---------------tttttgagacgcggcctcg--ctgtcacctaggctagagtgcaatggcacgatctcagctcactatagcctctgcctcccgaattcaagc---tatcccatctcaacctcctgagtagctgggaacacaggcatgcgccaccatgcctggctaattttta--------------tattttccatagagacagg--t------------tcgccatgttg------------------ctcaagctggtcttgaaatcctgggctcaagc---------gatcctcctgtttcagccttccaaagagctaggattataggcgagtgccaccatgc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5394465 279 + 8899380 -----------cttttttttgagacagggcctca--ctgtcacctgggctagagtgcaatggcatgatctcggctcactgcagcctctgcctcctgaattcaagc---tatcccatctcaacctcctgagtagctgggaacacaggcacgtgccaccatgcctggctaattttta--------------tattttccgtagagacagga-t------------ttgccgtgttg------------------ctcaggctggtcttgaaatcctgggctcaagc---------gatcctcctgcttcggccttccaaagtgctaggattataggcgtgtgccaccatgc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1603805 283 - 2680843 -------tttttttttttttgagacagggcttca--ctgtcacctaagctgtagtgcaatgacacgatctcggctcactgcagcctctacctcctgaattcaagc---tatcccatctcaacctcctgagtagctgggaacacaggcacgtgccaccatgcctggctaattttta--------------tattttccatagagacaggg-t------------tcgccatgttg------------------ctcaggctggccttgaaatcctgggctcaagg---------gatcctcttgcttcggccttccaaagtgctaggattataggcgtgtgccaccatgc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 353039 283 - 4471408 -------ttttttttttttggagacagggcctcg--ctgtcacctaggctggagtgcaatggcacgatctcggctcactgcaactgctgcctcccgaattcaatc---tatcccatctcaacctcctgagtagctgggaacacaggcacacaccaccatgcctggctaattttta--------------tattttctatagagacagag-t------------tcgccatgttg------------------ctcaggctggtcttgaaatcctgagctcaagc---------gatccttctgcttcggccttccaaagtgctaggattataggcatgtgccaccatgc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5467143 339 + 5549422 tta----tttttttttttttgagacagagcctcaagctgtccccctgggtagagtgccgtggcatta---cagctcacagcaacctccaactcctgggctcaagcgagtctcctgcctccgcctcccaagtagctgggaccacaggcgcccgccacaacgcccggccattttttggttgcagccgtcattgttgtctggcgggtccgggctggggattcgaacccgccaccctaggtgtacgtggctggcgccctagcccg---ttgagctacaggcgccgagccTGGTCTTTTATTTTTTATGTTTAATGACCCAAGCCCCTAAGATATCAAAAGTACTTCACCAACC i otoGar3.GL873654 T 357 C 0 e proCoq1.NW_012149263v1 566331 0 + 2501019 C e micMur3.chr22 3949680 212 - 30143674 I e dasNov3.JH563638 309535 0 + 643850 C e mm10.chr7 111081855 1436 - 145441459 I e canFam3.chr1 4604306 0 - 122678785 C a score=63958.000000 s hg38.chr19_GL383574v1_alt 62343 6 + 155864 ccggcc s panTro5.chr19 36130972 6 + 61309027 ctggcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39877101 6 + 64411610 ctggcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294780 6 - 8369475 ccggcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887392 6 - 106955855 ccggcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30199123 6 + 53671032 ctggcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652869 6 + 59248254 ctggcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519456 6 - 13342542 ctggcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449913 6 + 7714307 ctggcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261887 6 + 50890351 ctggcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 880755 6 - 2385121 ctggcc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2316031 6 + 4274983 ctggcc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28550675 6 + 49145316 ccagcc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5394744 6 + 8899380 ccagcc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1604088 6 - 2680843 ccagcc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 353322 6 - 4471408 ccagcc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5467482 6 + 5549422 TTAGTT i otoGar3.GL873654 C 0 I 7 s dasNov3.JH563638 309535 6 + 643850 CTGGTC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 566331 0 + 2501019 C e micMur3.chr22 3949680 212 - 30143674 I e mm10.chr7 111081855 1436 - 145441459 I e canFam3.chr1 4604306 0 - 122678785 C a score=39088.000000 s hg38.chr19_GL383574v1_alt 62349 3 + 155864 CTT- s panTro5.chr19 36130978 3 + 61309027 ctt- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39877107 3 + 64411610 CTT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294786 3 - 8369475 CTT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887398 3 - 106955855 ATT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30199129 3 + 53671032 CTT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652875 3 + 59248254 CTT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519462 3 - 13342542 CTT- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449919 3 + 7714307 CTT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261893 3 + 50890351 CTT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 880761 3 - 2385121 CTT- i manLeu1.NW_012102454v1 C 0 I 308 s colAng1.NW_012111697v1 2316037 3 + 4274983 CTT- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28550681 3 + 49145316 CTT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5394750 3 + 8899380 CTT- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1604094 3 - 2680843 CTT- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 353328 3 - 4471408 CTT- i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 566331 3 + 2501019 CTT- i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5467495 3 + 5549422 CTT- i otoGar3.GL873654 I 7 C 0 s canFam3.chr1 4604306 3 - 122678785 CTT- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 309541 3 + 643850 -TTC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3949680 212 - 30143674 I e mm10.chr7 111081855 1436 - 145441459 I a score=147079.000000 s hg38.chr19_GL383574v1_alt 62352 9 + 155864 TACTTTCTT s panTro5.chr19 36130981 9 + 61309027 tactttctt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39877110 9 + 64411610 TACTTTCTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294789 9 - 8369475 TACTTTCTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887401 9 - 106955855 TACTTTCTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30199132 9 + 53671032 TACTTTCTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652878 9 + 59248254 TACTTTCTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519465 9 - 13342542 TACTTTCTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449922 9 + 7714307 TACTTTCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261896 9 + 50890351 TACTTCCTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 881072 9 - 2385121 TACTTTCTT i manLeu1.NW_012102454v1 I 308 C 0 s colAng1.NW_012111697v1 2316040 9 + 4274983 TACTTTCTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28550684 9 + 49145316 TACtttctt i calJac3.chr22 C 0 I 1039 s saiBol1.JH378197 5394753 9 + 8899380 TACTTTCTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1604097 9 - 2680843 TACTTTCTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 353331 9 - 4471408 TACTTTCTT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 566334 9 + 2501019 TACTTTCTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5467498 9 + 5549422 TACTGTCTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4604309 9 - 122678785 TACTTGCTT i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 309544 9 + 643850 TACTTCCTT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3949680 212 - 30143674 I e mm10.chr7 111081855 1436 - 145441459 I a score=26730.000000 s hg38.chr19_GL383574v1_alt 62361 2 + 155864 AT s panTro5.chr19 36130990 2 + 61309027 AT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39877119 2 + 64411610 AT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294798 2 - 8369475 AT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887410 2 - 106955855 AT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30199141 2 + 53671032 AT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652887 2 + 59248254 AT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519474 2 - 13342542 AT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449931 2 + 7714307 AT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261905 2 + 50890351 AT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 881081 2 - 2385121 AT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2316049 2 + 4274983 AT i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5394762 2 + 8899380 AC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1604106 2 - 2680843 AT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 353340 2 - 4471408 AT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 566343 2 + 2501019 AT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5467507 2 + 5549422 GT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4604319 2 - 122678785 AT i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 309553 2 + 643850 AT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3949680 212 - 30143674 I e mm10.chr7 111081855 1436 - 145441459 I e calJac3.chr22 28550693 1039 + 49145316 I a score=968779.000000 s hg38.chr19_GL383574v1_alt 62363 74 + 155864 AATAGAAATTTAATGGAGTTAAT-ACCTGTAGATAGATGTAAAGGTATTGTTTTAGTCA--TCTACAGAAAGTACTA s panTro5.chr19 36130992 74 + 61309027 AATAGAAATTTAATGGAGTTAAT-ACCTGTAGATAGATGTAAAGGTATTGTTTTAGTCA--TCTACAGAAAGTACTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39877121 74 + 64411610 AATAGAAATTTAATGGAGTTAAT-ACCTGTAGATAGATGTAAAGGTATTGTTTTAGTCA--TCTACAGAAAGTACTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294800 74 - 8369475 AATAGAAATTTAATGGAGTTAAT-ACCTGTAGATAGATGTAAAGGTATTGTTTTAGTCA--TCTACAGAAAGTACTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887412 74 - 106955855 AATAGAAATTTAATGGAGATAAT-ACCTGTAGATAGATGTAAAGGTATTGTTTTAGTCA--TCTACAGACAGTACTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30199143 74 + 53671032 AATAGAAATTTAATGGAGATAGT-ACCTGTAGATAGATGTAAAGGTATTGTTTTAGTCA--TCTACAGAAAGTACTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652889 74 + 59248254 AATAGAAATTTAATGGAGATAGT-ACCTGTAGATAGATGTAAAGGTATTGTTTTAGTCA--TCTACAGAAAGTACTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519476 74 - 13342542 AATAGAAATTTAATGGAGATAGT-ACCTGTAGATAGATGTAAAGGTATTGTTTTAGTCA--TCTACAGAAAGTACTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5449933 74 + 7714307 AATAGAAATTTAATGGAGATAGT-ACCTGTAGATAGATGTAAAGGTATTGTTTTAGTCA--TCTACAGAAAGTACTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261907 74 + 50890351 AATAGAAATTTAATGGAGATAGT-ACCTGTAGATAGATGTAAAGGTATTGTTTTGGTCA--TCTACAGAAAGTACTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 881083 74 - 2385121 AATAGAAATTTAATGGAGATAGT-ACCTGTAGATAGATGTAAAGGTATTGTTTTAGTCA--TCTACAGAAAGTACTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2316051 74 + 4274983 AATAGAAATTTAATAGAGATAGT-GCCTGTAGATAGATGTAAAGGTATTGTTTTAGTCA--TCTACAGAAAGTACTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28551732 70 + 49145316 aaaggaaaTTTAATGGAGATAAT-ACCTG----TAGATGTAAAGGTATCGTTTTAGTCA--TCTACAGAAAGTACTA i calJac3.chr22 I 1039 C 0 s saiBol1.JH378197 5394764 70 + 8899380 AATAGAAGTTTAATGGAGATAAT-ACCTG----TAGATGTAAAGGTATCATTTTAGTCA--TCTACAGAAAGTACTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1604108 69 - 2680843 AATAGAAATTTAATGGAGATAAT-A-CTG----TAGATGTAAAGGTATCGTTTTAGTCA--TCTACAGAAAGTACTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 353342 70 - 4471408 AATAGAAATTTAATGGAGATAAT-ACCTG----TAGATGTAAAGGTATCGTTTTAGTCA--TCTGCAGAAAGTACTA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 566345 70 + 2501019 AATATAAATTTAATGAAGATAAT-ACCTG----TAGATATAACGGTATCATTTTAGTCA--TCTATGAAAAGTACTA i proCoq1.NW_012149263v1 C 0 I 233 s otoGar3.GL873654 5467509 65 + 5549422 AAT---AATTTAATGAAAATAATAACATG----TAGATATGAAGGTGTCATTTTAGTCA--ATTACCAAAAATA--- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4604321 66 - 122678785 ------AATGTAATGGAGATAAT-ACCTA----CAGATATAAAAGTACCACTTTAGACATTTCTTCGGAAAGTACTA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 309555 72 + 643850 AATAGAAATTGAATGTAGATAAT-GCCTG----TAGATATAAAGTTATCACTTTGGTCACATCTTCAGAAAATACTA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3949680 212 - 30143674 I e mm10.chr7 111081855 1436 - 145441459 I a score=143886.000000 s hg38.chr19_GL383574v1_alt 62437 14 + 155864 AGAA----AGATTAAAAC s panTro5.chr19 36131066 14 + 61309027 AGAA----AGATTAAAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39877195 14 + 64411610 AGAA----AGATTAAAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294874 14 - 8369475 AGAA----AGATTAAAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887486 14 - 106955855 AGAA----AAATTAAAAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30199217 14 + 53671032 AGAA----AAATTAAAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652963 14 + 59248254 AGAA----AAATTAAAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519550 14 - 13342542 AGAA----AAATTAAAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5450007 14 + 7714307 AGAA----AAATTAAAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261981 14 + 50890351 AGAA----AAATTAAAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 881157 14 - 2385121 AGAA----AAATTAAAAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2316125 14 + 4274983 AGAA----AAATTAAAAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28551802 14 + 49145316 GGAA----CAATTAAAAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5394834 14 + 8899380 GGAA----CAGTTAAAAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1604177 14 - 2680843 GGAA----CAATTAAAAC i cebCap1.NW_016107633v1 C 0 I 349 s aotNan1.NW_018505377v1 353412 14 - 4471408 GGAA----CAATTAAAAC i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4604387 18 - 122678785 ACAATTTTAGGTTATAGC i canFam3.chr1 C 0 I 18 s dasNov3.JH563638 309627 14 + 643850 AAAA----AAGTTAAAGC i dasNov3.JH563638 C 0 I 19 e proCoq1.NW_012149263v1 566415 233 + 2501019 I e micMur3.chr22 3949680 212 - 30143674 I e otoGar3.GL873654 5467574 0 + 5549422 C e mm10.chr7 111081855 1436 - 145441459 I a score=718479.000000 s hg38.chr19_GL383574v1_alt 62451 61 + 155864 AAG--TCACCATAGTCTTATGGTTGTC---ATTGGCGAAAGCCTGTGTTTGACCTGACTACAACAT s panTro5.chr19 36131080 61 + 61309027 AAG--TCACCATAGTCTTATGGTTGTC---ATTGGCGAAAGCCTGTGTTTGACCTGACTACAACAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39877209 61 + 64411610 AAG--TCACCATAGTCTTATGGTTGTC---ATTGGCGAAAACCTGTGTTTGACCTGACTACAACAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294888 61 - 8369475 AAG--TCACCATAGTCTTATGGTTGTC---ATTGGCGAAAGCCTGTGTTTGACCTGACTACAACAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887500 60 - 106955855 AAG--TCA-CATAGTCTTATGGTTGTC---ATTGGCGAAAGCCTAAGTTTGACCTGACTACAACAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30199231 61 + 53671032 AAG--TTACCATAGTCTTATGGTTGTT---ATTGGGGAAAGCCTGTGTTTGACCTGACTACAATAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34652977 61 + 59248254 AAG--TTACCATAGTCTTATGGTTGTT---ATTGGGGAAAGCCTGTGTTTGACCTGACTACAATAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519564 61 - 13342542 AAG--TTACCATAGTCTTATGGTTGTT---ATTGGGGAAAGCCTGTGTTTGACCTGACTACAATAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5450021 61 + 7714307 AAG--TTACCATAGTCTTATGGTTGTT---ATTGGGGAAAGCCTGTGTTTGACCTGACTACAATAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29261995 61 + 50890351 AAG--TTACCATAGTCTTATGGTTGTT---ATTGGGGAAAGCCTGTGTTTGACCTGACTACAATAT i chlSab2.chr6 C 0 I 9 s manLeu1.NW_012102454v1 881171 61 - 2385121 AAG--TTACCATAGTCGTATGGTTGTT---ATTGGGGAAAGCCTGTGTTTGACCTGACTACAATAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2316139 61 + 4274983 AAG--TTACCATAGTCTTATGGTTGTC---ATTGGGGAAAGCATGTGTTTGACCTGACTACAATAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28551816 61 + 49145316 AAG--TCACCATAGTCTTATGGTTGTC---ATTGGGGAAAGCCTGTGTTTGACCTAACTATAACAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5394848 61 + 8899380 AAG--TCACCATAGTCTTATGGTTGTC---ATTGGGGAAAGCCTGTGTTTGACCTAACCATAACAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1604540 60 - 2680843 AAG--TCACCATAGTCTTATGGTTGTC---ATT-GGGAAAGCCTTTGTTTGACCTAACTGTAACAT i cebCap1.NW_016107633v1 I 349 C 0 s aotNan1.NW_018505377v1 353426 61 - 4471408 AAG--TCACCATAGTCTTATGGTTGTC---ACTGGGGAAAGCCTGTGTTTGTCCTAACTATAACAT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5467574 58 + 5549422 AAG--TCAACATGATCTTGTGGTTGT------TGGGGAGGACCTGTATCTGACCTGCCTAAAACAT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4604423 66 - 122678785 AAGCATCAATATAATCTTGTGTTTGTCATTATTGGGGAAAGCCTGCATCCTACTTGCATACATCAT i canFam3.chr1 I 18 C 0 s dasNov3.JH563638 309660 55 + 643850 GGG--TGAACATAATCTTGTG---------ATTGGAGAATACCTATGTTTGGCCTTTCTACAGTAT i dasNov3.JH563638 I 19 C 0 e proCoq1.NW_012149263v1 566415 233 + 2501019 I e micMur3.chr22 3949680 212 - 30143674 I e mm10.chr7 111081855 1436 - 145441459 I a score=64347.000000 s hg38.chr19_GL383574v1_alt 62512 14 + 155864 GATAATTTGTAGGA--- s panTro5.chr19 36131141 9 + 61309027 GACCTTT-----GA--- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39877270 9 + 64411610 GACCTTT-----GA--- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294949 9 - 8369475 GACCTTT-----GA--- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887560 9 - 106955855 GACCTTT-----GA--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30199292 9 + 53671032 AGCCTTT-----GA--- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34653038 9 + 59248254 AGCCTTT-----GA--- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519625 9 - 13342542 AGCCTTT-----GA--- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5450082 9 + 7714307 AGCCTTT-----GA--- i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 881232 9 - 2385121 AGCCTTT-----GA--- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2316200 9 + 4274983 AGTCTTT-----GA--- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28551877 9 + 49145316 GACCTTT-----GA--- i calJac3.chr22 C 0 I 3 s saiBol1.JH378197 5394909 9 + 8899380 GACGTTT-----GA--- i saiBol1.JH378197 C 0 I 3 s cebCap1.NW_016107633v1 1604600 9 - 2680843 GACCTTT-----GA--- i cebCap1.NW_016107633v1 C 0 I 3 s aotNan1.NW_018505377v1 353487 9 - 4471408 GACCTTT-----GA--- i aotNan1.NW_018505377v1 C 0 I 3 s otoGar3.GL873654 5467632 9 + 5549422 GAACTTT-----GT--- i otoGar3.GL873654 C 0 I 3 s canFam3.chr1 4604489 9 - 122678785 GATCTTT-----GA--- i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 309715 12 + 643850 GATTTTT-----TATAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 566415 233 + 2501019 I e micMur3.chr22 3949680 212 - 30143674 I e mm10.chr7 111081855 1436 - 145441459 I e chlSab2.chr6 29262056 9 + 50890351 I a score=724604.000000 s hg38.chr19_GL383574v1_alt 62526 86 + 155864 TAATTCTAGGGAATCTCGTACCTGGCAGCAA----tttttttttt------------------------tttttttGATGT----AAAC--TCTTCCACTAAGTAGAAATAACAGATAAA s panTro5.chr19 36131150 82 + 61309027 TAATTCTAGGGAATCTCGTACCTGGCAGCAA--------TTTTTT------------------------TTTTTTGGATGT----AAAC--TCTTCCGCTAAGTAGAAATAACAGATAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39877279 82 + 64411610 TAATTCTAGGGAATCTCGTACCTGGCAGCAA--------TTTTTT------------------------TTTTTTGGATGT----AAAC--TCTTCCGCTAAGTAGAAATAACAGATAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6294958 84 - 8369475 TAATTCTAGGGAATCTCGTACCTGGCAGCAA------TTTTTTTT------------------------TTTTTTTAGTGT----AAAC--TCTTCCACTAAGTAGAAATAACAGATAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887569 90 - 106955855 TAATTCTAGAGAATCTCGTACCAGGCAGCAAtttttttttttttt------------------------tttttttAATGT----AAAC--TCTTCCACTAAGTAGAAATAACAGATAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30199301 76 + 53671032 TAATTCTAGGGAATCTCGTACCAGGCCGCAA------------TT------------------------TTTTTTAAAGGT----AAA----CTTCCACTAAGTAGAAATAACAGATAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34653047 76 + 59248254 TAATTCTAGGGAATCTCGTACCAGGCCGCAA------------TT------------------------TTTTTTAAAGGT----AAA----CTTCCACTAAGTAGAAATAACAGATAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519634 76 - 13342542 TAATTCTAGGGAATCTCGTACCAGGCCGCAA------------TT------------------------TTTTTTAAAGGT----AAA----CTTCCACTAAGTAGAAATAACAGATAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5450091 76 + 7714307 TAATTCTAGGGAATCTCGTACCAGGCCGCAA------------TT------------------------TTTTTTAAATGT----AAA----CTTCCACTAAGTAGAAATAACAGATAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29262065 76 + 50890351 TAATTCTAGGGAATCTCGTACCAGGCCACAA------------TT------------------------TTTTTTAAATGT----AAA----CTTCCACTAAGTAGAAATAACAGATAAA i chlSab2.chr6 I 9 C 0 s manLeu1.NW_012102454v1 881241 76 - 2385121 TAATTCTAGGGAATCTCGTACCAGGCCGCAA------------TT------------------------TTTTTTAAATGT----AAA----CTTCCACTAAGTAGAAATAACAGATAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2316209 77 + 4274983 TAATTCTAGGGAATCTCATACCAGGCCGCAA-----------TTT------------------------TTTTTTAAATGT----AAA----CTTCCACTAAGTAGAAATAACAGATAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28551889 77 + 49145316 TATTTCTAGGGAATCTCATACGAGGCCGCAA-------------T------------------------TTTTTTTAACGT----AAAC--TATTCTACTGGGTAGAAATAAAAGATAAA i calJac3.chr22 I 3 C 0 s saiBol1.JH378197 5394921 78 + 8899380 TATTTCTAGGGAATCTCGTACCAGGCAGCAA------------TT------------------------TTTTTTTAATGT----AAAC--TATTCTACTCAGTAGAAATAATAGATAAA i saiBol1.JH378197 I 3 C 0 s cebCap1.NW_016107633v1 1604612 78 - 2680843 TATTTCTAGGGAATCTCGTACCAGGCAGCAA------------TT------------------------TTTTTTTAACGT----AAAT--TATTCTACTGGATAGAAATAACAGATAAA i cebCap1.NW_016107633v1 I 3 C 0 s aotNan1.NW_018505377v1 353499 80 - 4471408 TATTTCTAGGGAATCTCATACCAGGCAGCAA----------TTTT------------------------TTTTTTTAATGC----AAAC--TATTCTACTGGGTAGAAATGACAGATAAA i aotNan1.NW_018505377v1 I 3 C 0 s otoGar3.GL873654 5467644 79 + 5549422 TATTTCTAGGGAATCTCATACCAGGCAGTAG------------TT------------------------TTTGAAAAACGT----AAACTTTATTCCTCTAGGTCGAAAC-ACAGATAAA i otoGar3.GL873654 I 3 C 0 s canFam3.chr1 4604501 82 - 122678785 TATTCCTGAGAAGTATTGC-CCAGGCAGCAG------------TT------------------------TTTGAAAAACTTACTAAAATCTTATTCCACCAGGTAGAAAT-ACAAATAAA i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 309727 101 + 643850 ------TAGGCAATCTTGTGTCAGGAAATAATGTTGCATACTTTTAGGTTAGCATATGTATGCAGCAGGTTTTGAAAACTT----AAATCTTATTCCACTAGGTAGAAATA--------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 566415 233 + 2501019 I e micMur3.chr22 3949680 212 - 30143674 I e mm10.chr7 111081855 1436 - 145441459 I a score=400647.000000 s hg38.chr19_GL383574v1_alt 62612 69 + 155864 ATTGTGAGGGGGA----------GGGAGTTG--TTTT----------GAAGCTGTTGAAGttttttttt--aaattattattattttttattt---------- s panTro5.chr19 36131232 68 + 61309027 ATTGTGAGGGGGA----------GGGAGTTG--TTTT----------GAAGCTGTTGAAG-TTTTTTTT--AAATTATTATTATTTTTTATTT---------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39877361 68 + 64411610 ATTGTGAGGGGGA----------GGGAGTTG--TTTT----------GAAGCTGTTGAAG-TTTTTTTT--AAATTATTATTATTTTTTATTT---------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6295042 69 - 8369475 ATTGTGAGGGGGA----------GGGAGTTG--TTTT----------GAAGCTGTTGAAGTTTTTTTTT--AAATTATTATTATTTTTTATTT---------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887659 67 - 106955855 ATTGTGAGGGGGA----------GGGAGTTG--TTTT----------GAAGCTGTTGAAGttttttttt----attattattattttttattt---------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30199377 67 + 53671032 ATTGTGAGGGGGA----------GGGG---G--TTTT----------GAAGCTGTTGAAGGtttttttt-ttaattattattattttttattt---------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34653123 67 + 59248254 ATTGTGAGGGGGA----------GGGG---G--TTTT----------GAAGCTGTTGAAGttttttttt-ttaattattattattttttattt---------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519710 67 - 13342542 ATTGTGAGGGGGA----------GGGG---G--TTTT----------GAAGCTGTTGAAGttttttttt-ttaattattattattttttattt---------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5450167 69 + 7714307 ATTGTGAGGGGGA----------GGGGGTTG--TTTT----------GAAGCTGTTGAAG-tttttttt-ttaattattattattttttattt---------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29262141 66 + 50890351 ATTGTGAGGGGGA----------GGGGGTTG--TTTT----------GAAGCTGttgaagttttttttt-----taattattattttttattt---------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 881317 68 - 2385121 ATTGTGAGGGGGA----------GGGGGTTG--TTTT----------GAAGCTGTTGAAGttttttttt---aattattattattttttattt---------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2316286 67 + 4274983 ATTGTGAGGGGGA----------GGGGGTTG--TTTT----------GAAGCTGTTGAAGTTTTTTTT----AATTATTATTATTTTTTATTT---------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28551966 48 + 49145316 ATTGTGAAGGGGA----------GGGAGTTA--TTTC----------GAAGCTGTT-----CATTTTTT------------------CTATTT---------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5394999 45 + 8899380 ATTGTGAAGGGGA----------GAGAGTTG--TTTT----------GAAGCTGTT-----CTTTTTTT---------------------TTT---------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1604690 48 - 2680843 ATTGTGAAGGGGA----------GGGAGTTG--TTTC----------GAAGCTGTT-----CATTTTTT------------------TTGTTT---------- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 353579 48 - 4471408 ATTGTGAAGGGGA----------GGGAGTTG--TTTC----------GAAGCTGTT-----CATTTTTT------------------TTATTT---------- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5467723 91 + 5549422 GTTGTGGAGTGGGCTTTTTTGTTGGAGTTTG--GTATTGGCTTGGGGGGGGGTGTTTTATTTTTATTTTGTTTACCTTGTTTATTATTTATTT---------- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111083291 45 - 145441459 ACTTTGGGGGGGG----------GGG----G--TGAT----------GGTGTTGTTGGGGGTTTTGTTT--CA------------------------------ i mm10.chr7 I 1436 C 0 s canFam3.chr1 4604583 69 - 122678785 GTTCCATTGGTTA----------ATTGGTTGGTTGTT----------GGGGATtttgg---ttttgttt-tgttttgttttAAATGTTTCTTT---------- i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 309828 42 + 643850 ---------------------------------------------------CTGGT--AGTTTTTTTTT--------TTGTCATTTTTTGTTTTTGGTATTTC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 566415 233 + 2501019 I e micMur3.chr22 3949680 212 - 30143674 I a score=16670.000000 s hg38.chr19_GL383574v1_alt 62681 1 + 155864 t s panTro5.chr19 36131300 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39877429 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6295111 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887726 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30199444 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34653190 1 + 59248254 t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519777 1 - 13342542 t i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5450236 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29262207 1 + 50890351 t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 881385 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2316353 1 + 4274983 T i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28552014 1 + 49145316 T i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5395044 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1604738 1 - 2680843 T i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 353627 1 - 4471408 T i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3949892 1 - 30143674 T i micMur3.chr22 I 212 C 0 s otoGar3.GL873654 5467814 1 + 5549422 T i otoGar3.GL873654 C 0 I 4 s mm10.chr7 111083336 1 - 145441459 T i mm10.chr7 C 0 C 0 s canFam3.chr1 4604653 1 - 122678785 C i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 309870 1 + 643850 T i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 566415 233 + 2501019 I a score=443588.000000 s hg38.chr19_GL383574v1_alt 62682 27 + 155864 taACCTAATGA-CA-AGCCCACTAAG-----GAT s panTro5.chr19 36131301 27 + 61309027 TAACCTAATGA-CA-AGCCCACTAAG-----GAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39877430 27 + 64411610 TAACCTAATGA-CA-AGCCCACTAAG-----GAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6295112 27 - 8369475 TAACCTAATGA-CA-AGCCCACTAAG-----GAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887727 27 - 106955855 tAGCCTAATGA-CA-AGCCCACTAAG-----GAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30199445 27 + 53671032 tAACCTAATGA-CA-AGCCCACTAAG-----GAT i rheMac8.chr19 C 0 I 1 s macFas5.chr19 34653191 27 + 59248254 tAACCTAATGA-CA-AGCCCACTAAG-----GAT i macFas5.chr19 C 0 I 1 s macNem1.NW_012011689v1 4519778 27 - 13342542 tAACCTAATGA-CA-AGCCCACTAAG-----GAT i macNem1.NW_012011689v1 C 0 I 1 s cerAty1.NW_012005268v1 5450237 27 + 7714307 tAACCTAATGA-CA-AGCCCACTAAG-----GAT i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29262208 27 + 50890351 tAACCTAATGA-CA-AGCCCACTAAG-----GAT i chlSab2.chr6 C 0 I 1 s manLeu1.NW_012102454v1 881386 27 - 2385121 tAACCTAATGA-CA-AGCCCACTAAG-----GAT i manLeu1.NW_012102454v1 C 0 I 1 s colAng1.NW_012111697v1 2316354 27 + 4274983 TAACCTAATGA-CA-AGCCCACTAAG-----GAT i colAng1.NW_012111697v1 C 0 I 314 s calJac3.chr22 28552015 26 + 49145316 TAACCTAATGA-T--AGCCCACTAAG-----TTT i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5395045 26 + 8899380 TAACCTAATGA-C--AGCCCACTAAG-----GTT i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107633v1 1604739 26 - 2680843 TAACCTAATGA-C--AGCCCACTAAG-----GTT i cebCap1.NW_016107633v1 C 0 I 1 s aotNan1.NW_018505377v1 353628 26 - 4471408 TAACCTAATGA-C--AGCCCACTAAG-----GTT i aotNan1.NW_018505377v1 C 0 I 1 s micMur3.chr22 3949893 27 - 30143674 TAACCTAGTGA-CC-AGCCCACTAAG-----GAT i micMur3.chr22 C 0 I 1 s proCoq1.NW_012149263v1 566648 27 + 2501019 TAACCTAGTGA-CC-AGCCCACTAAG-----GAT i proCoq1.NW_012149263v1 I 233 I 1 s otoGar3.GL873654 5467819 33 + 5549422 TAATCTAGTGACCC-AGCCCACTAAGGATAAGAT i otoGar3.GL873654 I 4 I 1 s mm10.chr7 111083337 27 - 145441459 TAGCTTAATAA-CC-AGCCCATTGAA-----GAT i mm10.chr7 C 0 I 1 s canFam3.chr1 4604654 28 - 122678785 TAGCCTAGTGA-CCTAGCCCACTAAA-----GAT i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 309871 27 + 643850 TAATCTATTGA-CC-AGCCCACTAGG-----GAT i dasNov3.JH563638 C 0 C 0 a score=180149.000000 s hg38.chr19_GL383574v1_alt 62709 12 + 155864 -ACCATTCTTAAT s panTro5.chr19 36131328 12 + 61309027 -ACCATTCTTAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39877457 12 + 64411610 -ACCATTCTTAAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6295139 12 - 8369475 -ACCATTCTTAAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887754 12 - 106955855 -ACCATTCTTAAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30199473 12 + 53671032 -ACCATTCTTAAT i rheMac8.chr19 I 1 C 0 s macFas5.chr19 34653219 12 + 59248254 -ACCATTCTTAAT i macFas5.chr19 I 1 C 0 s macNem1.NW_012011689v1 4519806 12 - 13342542 -ACCATTCTTAAT i macNem1.NW_012011689v1 I 1 C 0 s cerAty1.NW_012005268v1 5450265 12 + 7714307 -ACCATTCTTAAT i cerAty1.NW_012005268v1 I 1 C 0 s chlSab2.chr6 29262236 12 + 50890351 -ACCATTCTTAAT i chlSab2.chr6 I 1 C 0 s manLeu1.NW_012102454v1 881414 12 - 2385121 -ACCATTCTTAAT i manLeu1.NW_012102454v1 I 1 C 0 s colAng1.NW_012111697v1 2316695 12 + 4274983 -ACCATTCTTAAT i colAng1.NW_012111697v1 I 314 C 0 s calJac3.chr22 28552042 12 + 49145316 -ACCAGTCTTAAT i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5395072 12 + 8899380 -ACCAGTCTCAAT i saiBol1.JH378197 I 1 I 199 s cebCap1.NW_016107633v1 1604766 12 - 2680843 -ACCAGTCTTAAT i cebCap1.NW_016107633v1 I 1 C 0 s aotNan1.NW_018505377v1 353655 12 - 4471408 -AGCAGTCTTAAT i aotNan1.NW_018505377v1 I 1 C 0 s micMur3.chr22 3949921 12 - 30143674 -ACCAGTTTAAAA i micMur3.chr22 I 1 C 0 s proCoq1.NW_012149263v1 566676 12 + 2501019 -ACCAGTTTTAAA i proCoq1.NW_012149263v1 I 1 C 0 s otoGar3.GL873654 5467853 12 + 5549422 -ACCAGTTTTAAA i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111083365 12 - 145441459 -ACCAGGTTTAAA i mm10.chr7 I 1 C 0 s canFam3.chr1 4604683 12 - 122678785 -ACCAGTTTTAAA i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 309898 13 + 643850 AACCAGTTGTAAA i dasNov3.JH563638 C 0 C 0 a score=9162869.000000 s hg38.chr19_GL383574v1_alt 62721 543 + 155864 ATCTGGTCTGATAAGTGGATTAATTCAAATTTG---------TG-------CTAAGGGTTTGAATT-GATAGAAATAAAACTCTGGAC-----AATTTT--TTTTAGGGTCTAGATTA-TTTTGAAATCCCCA----A-TAGGGTAGTT-TGTTATCTTTTGGTTACATTTTAGGTCGCTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCAGCCCACTTACCTGCTCCAGCAGCTGTTGGGAGAAGGAGTCCTGTATCAACCAGGCCTTTGCCATCTGCCAGCCAAAAGGCAGGAGAGAATCAGGAGCACAGGCGAGGTAGAACTTTAGCTGTTTACTGTTCCTTAATTGACTGATCAATGTTTTCCACTCACTTTA-TTTTCA-TTAGAAGGATTTACTTCATGTGAATGATCCCAGAAAA-TT-AAACTGAATATGAT----AGAATGTTTGGTCTTTCAAATTTGACTCAAA---GTGG--TGGTGGTGTGGGTAT---AGTTTTT--TGGGCATTGCACAGGCtttgtttt---gggt---tttttggtttgtttgtttg s panTro5.chr19 36131340 543 + 61309027 ATCTGGTCTGATAAGTGGATTAATTCAAATTCG---------TG-------CTAAGGGTTTGAATT-GGTAGAAATAAAACTCTGGAC-----AATTTT--TTTTAGGGTCTAGATTA-TTTTGAAATCCCCA----A-TAGGGTAGTT-TCTTATCTTTTGGTTACATTTTAGGTCGCTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCAGCCCACGTACCTGCTCCAGCAGCTGTTGGGAGAAGGAGTCCTGTATCAACCAGGCCTTTGCCATCTGCCAGCCAAAAGGCAGGAGAGAATCAGGAGCACAGGCGAGGTAGAACTTTAGCTGTTTACTGTTCCTTAATTGACTGATCAATGTTTTCCACTCACTTTA-TTTTCA-TTAGAAGGATTTACTTCATGTGAATGATCCCAGAAAA-TT-AAACTGAATATGAT----AGAATGTTTGGTCTTTCAAATTTGACTCAAA---GTGG--TGGTGGTGTGGGTAT---AGTTTTT--TGGACATTGCACAGGCtttgtttt---gggt---tttttggtttgtttgtttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39877469 543 + 64411610 ATCTGGTCTGATAAGTGGATTAATTCAAATTCG---------TG-------CTAAGGGTTTGAATT-GGTAGAAATAAAACTCTGGAC-----AATTTT--TTTTAGGGTCTAGATTA-TTTTGAAATCCCCA----A-TAGGGTAGTT-TCTTATCTTTTGGTTACATTTTAGGTCGCTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCAGCCCACGTACCTGCTCCAGCAGCTGTTGGGAGAAGGAGTCCTGTATCAACCAGGCCTTTGCCATCTGCCAGCCAAAAGGCAGGAGAGAATCAGGAGCACAGGCGAGGTAGAACTTTAGCTGTTTACTGTTCCTTAATTGACTGATCAATGTTTTCCACTCACTTTA-TTTTCA-TTAGAAGGATTTACTTCATGTGAATGATCCCAGAAAA-TT-AAACTGAATATGAT----AGAATGTTTGGTCTTTCAAATTTGACTCAAA---GTGG--TGGTGGTGTGGGTAT---AGTTTTT--TGGACATTGCACAGGCtttgtttt---gggt---tttttggtttgtttgtttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6295151 543 - 8369475 ATCTGGTCTGATAAGTGGATTAATTCAAATTCG---------TG-------CTAAGGATTTGAATT-GGTAGAAATAAAACTCTGGAC-----AATTTT--TTTTAGGGTCTAGATTA-TTTTGAAATCCCCA----A-TAGGGTAGTT-TCTTATCTTTTGGTTACATTTTAGGTCGCTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCAGCCCACTTACCTGCTCCAGCAGCTGTTGGGAGAAGGAGTCCTGTATCAACCAGGCCTTTGCCATCTGCCAGCCAAAAGGCAGGAGAGAATCAGGAGCACAGGCGAGGTAGAACTTTAGCTGTTTACTGTTCCTTAATTGACTGATCAATGTTTTCCACTCACTTTA-TTTTCA-TTAGAAGGATTTACTTCATGTGAATGATCCCAGAAAA-TT-AAACTGAATATGAT----AGAATGTTTGGTCTTTCAAATTTGACTCAAA---GTGG--TGGTGGTGTGGGTAT---AGTTTTT--TGGGCATTGCACAGGCtttgtttt---gggt---tttttggtttgtttgtttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63887766 542 - 106955855 ATCTGGTCTGATAAGTGGATTAATTCAGATTTG---------TG-------CTAAGGATTTGAATT-GGTAGAAATAAAACTCCGGAC-----AATTTT--ATTTAGGGTCTAGATTA--TTTGAAATCCCCA----A-TAGGGTAGTT-TCTTATCTTTTGGTTACATTTTAGGTCGCTCAAGCCCTCAGTTAAACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCGGCCCACTTACCTGCTCCAGCAGCTGTTGGGAGAAGGAGTCCTGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAGGCAGGAGAGAATCAGGAGCACAGGCGAGGTAGAACTTTAGCTGTTTACTGTTCCTTAATTGACTAATCAATGTTTTCCACTCACTTTA-TTTTCA-TTAGAAGGATTTACTTCATATGAATGATCCCAGAAAA-TT-AAACTGAACATGAT----AGAATGTTTGGTCTTTCAAATTTGACTCAAA---GTGT--TGGTGGTGTGGGTAC---AGTTTTT--TGGGCATTGCACAGGCtttgtttt---gggt---tttttggtttgtttgtttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30199485 542 + 53671032 ATCTGGTCTGATAAGTGGATTAATTCAAATTTA---------TG-------CTAAGGATTTGAATT-GGTAGAAATAAAA--CTGGAC-----AATTTT--ATTTAGGGTCTAGATTATTTTTGAAATCCCCA----A-TAGGGTAGTT-TCTTATCTTTTGGTTACGTTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGTCCTGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAAGCAATAGAGAATCAGGAGCACAGGCGAGGTAGAACTTTAGCTGTTTACTGTTCCTTAATTGACTGATCAATGTTTTCCGCTCACTTTA-TTTTCA-TTAGAAGGATTTACATCATATGAATGATCCCAGAAAA-TT-AAACTGAACGTGAT----AGAATGTTCGGTCTTTCAAATTTGACTCAAA---GTGT--TGGTGGTGTGGGTAT---TGTTTTT--TGGGCATTGCACAGGCTTTGTTTT---GGGA---TTTTTGGTTTGTTTGTATG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34653231 542 + 59248254 ATCTGGTCTGATAAGTGGATTAATTCAAATTTA---------TG-------CTAAGGATTTGAATT-GGTAGAAATAAAA--CTGGAC-----AATTTT--ATTTAGGGTCTAGATTATTTTTGAAATCCCCA----A-TAGGGTAGTT-TCTTATCTTTTGGTTACGTTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGTCCTGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAAGCAATAGAGAATCAGGAGCACAGGCGAGGTAGAACTTTAGCTGTTTACTGTTCCTTAATTGACTGATCAATGTTTTCCGCTCACTTTA-TTTTCA-TTAGAAGGATTTACATCATATGAATGATCCCAGAAAA-TT-AAACTGAACGTGAT----AGAATGTTCGGTCTTTCAAATTTGACTCAAA---GTGT--TGGTGGTGTGGGTAT---TGTTTTT--TGGGCATTGCACAGGCTTTGTTTT---GGGA---TTTTTGGTTTGTTTGTATG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4519818 542 - 13342542 ATCTGGTCTGATAAGTGGATTAATTCAAATTTA---------TG-------CTAAGGATTTGAATT-GGTAGAAATAAAA--CTGGAC-----AATTTT--ATTTAGGGTCTAGATTATTTTTGAAATCCCCA----A-TAGGGTAGTT-TCTTATCTTTTGGTTACGTTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGTCCTGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAAGCAATAGAGAATCAGGAGCACAGGCGAGGTAGAACTTTAGCTGTTTACTGTTCCTTAATTGACTGATCAATGTTTTCCGCTCACTTTA-TTTTCA-TTAGAAGGATTTACATCATATGAATGATCCCAGAAAA-TT-AAACTGAACGTGAT----AGAATGTTCGGTCTTTCAAATTTGACTCAAA---GTGT--TGGTGGTGTGGGTAT---TGTTTTT--TGGGCATTGTACAGGCTTTGTTTT---GGGA---TTTTTGGTTTGTTTGTATG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5450277 542 + 7714307 ATCTGGTCTGATAAGTGGATTAATTCAAATTTA---------TG-------CTAAGGATTTGAATT-GGTAGAAATAAAA--CTGGAC-----AGTTTT--ATTTAGGGTCTAGATTATTTTTGAAATCCCCA----A-TAGGGTAGTT-TCTTATCTTTTGGTTACGTTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCAGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGTCCTGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAAGCAATAGAGAATCAGGAGCACAGGCGAGGTAGAACTTTAGCTGTTTACTGTTCCTTAATTGACTGATCAATGTTTTCCACTCACTTTA-TTTTCA-TTAGAAGGATTTACATCATATGAATGATCCCAGAAAA-TT-AAACTGAACGTGAT----AGAATGTTCGGTCTTTCAAATTTGACTCAAA---GTGT--TGGTGGGGTGGGTAT---TGTTTTT--TGGGCATTGCACAGGCTTTGTTTT---GGGT---TTTTTGGTTGGTTTGTTTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29262248 543 + 50890351 ATCTGGTCTGATAAGTGGATTAATTCAAATTTA---------TG-------CTAAGGATTTGAATT-GGTAGAAATAAAA--CTGGAC-----AATTTT--ATTTAGGGTCTAGATTATTTTTGAAATCCCCA----A-TAGGGTAGTTATCTTATCTTTTGGTTACGTTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGTCCTGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAAGCAATAGAGAATCAGGAGCACAGGCGAGGTAGAACTTTAGCTGCTTACTGTTCCTTAATTGACTGATCAATGTTTTCCACTCACTTTA-TTTTCA-TTAGAAGGATTTACATCATATGAATGATCCCAGAAAA-TT-AAACTGAACGTGAT----AGAATGTTCGGTCTTTCAAATTTGACTCAAA---GTGT--TGGTGGTGTGGGTAT---TGTTTTT--TGGGCATTGCATAGGCtttgtttt---gggt---tttttggtttgtttgtttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 881426 541 - 2385121 ATCTGGTCTGATAAGTGGCTTAATTCAAATTTA---------TG-------CTAAGGATTTGAATT-GGTAGAAATAAAA---TGGAC-----AATTTT--ATTTAGGGTCTAGATTATTTTTGAAATCCCCA----A-TAGGGTAGTT-TCTTATCTTTTGGTTACGTTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGTCCTGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAAGCAATAGAGAATCAGGAGCACAGGCGAGGTAGAACTTTAGCTGTTTACTGTTCCTTAATTGACTGATCAATGTTTTCCGCTCACTTTA-TTTTCA-TTAGAAGGATTTACATCATATGAATGATCCCAGAAAA-TT-AAACTGAACGTGAT----AGAATGTTCGGTCTTTCAAATTTGACTCAAA---GTGT--TGGTGGTGTGGGTAT---TGTTTTT--TGGGCATTGCACAGGCtttgtttt---gggt---tttttggtttgtttgtttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2316707 542 + 4274983 ATCTGGTCTGATAAGTGGATTAATTCAAATTTG---------TG-------CTAAGGATTTGAATT-GGTAGAAATAAAA--CTGGAC-----AATTTT--TTTTAGGGTCTAGATTATTTTTGAAATCCCCA----A-TAGGGTAGTT-TCTTATCTTTTGGTTACATTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGTCCTGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAAGCAATAGAGAATCAGGAGCACAGGCGAGGTAGAACTTTAGCTGTTTACTGTTCCTTAATTGACTGATCAATGTTTTCCACTGACTTTA-TTTTCA-TTAGAAGGATTTACATCATATAAAGGATCCCAGAAAA-TT-AAACTGAATGTGAT----AGAATGTTCGGTCTTTCAAATTTGACTCAAA---GTGT--TGGTGGTGTGGGTAT---TGTTTTT--TGGGCATTGCACAGGCTTTGTTTT---GGAT---TTTTTGGTTGGCTTGTTTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28552054 552 + 49145316 ATCTAGTCTGTTAAGTGGATTAATTCAAATTTGATTTGAATTGG-------CTAATGATTTGGATT-GGTAGAAATAAAACTCTAGAC-----AATTTT--ATTTAGGGTCTAAATTA-TTTTGAAATCCCCA----G-TAGGGTAGTT-TCTTATCTTTTCGTTACATTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACTGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGCCCTGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAAGCAATAGAGAATCAGGAGCACAGGAGAGGTAAAATTTCAGCTGTTTACTGTTCCTTAATTAACTGATCAATGTTTTCCACTCACTTTA-TTTTCA-TTAAAAGGGTTTACTTCAGATGAATGATCCCAGAAAA-TT-AAACCAAACGTGAT----AGAATGTTTGGTCTTTCAAATTTGATTCAAA---ATAT--TAGTGTTGTGGGTAT---AGATTTT--TGGGTATTGCACAGGCTTTGTTTT---AGGT---TTTTTGGTTCGTTTGCTTG i calJac3.chr22 C 0 I 8 s saiBol1.JH378197 5395283 533 + 8899380 ATCTAGTCTGTTAAGTGG----ATTCAAATTTG---------TG-------CTAAGGATTTGAATT-GGTAGAAATAAAACTCTAGAC-----AATTTT--ATTTAGGGTCTAAATTA-TTTTGAAATCCCCA----G-TAGGGTAG-T-TCTTACCTTTTGGTTACATTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACAATGGAACAAGGAGTGCAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGCCCTGTCTCAACCAGGCCTTTGCCATCTACCAGCCAAAAAGCAATAGAGAATCAGGAGCACAGGAGAGGTAATACTTCAGCTGTTTACTGTTCCTTAATTGACTGATCAGTGTTTTCCACTCACTTTA-TTTTCA-TTAAAA-----TAAATCAGATGAATGATCCCAGAAAA-TT-AAACTGAACGTGAT----AGAATGTTTGGTCTTTCAGATTTGATTCAAA---GTAT--TAGTTTTGTGGGTAT---AGATTTT--TAGGTATTGCACAGGCTTTGTTTT---AGGT---TTTTTGGTTTGTTTGCTTG i saiBol1.JH378197 I 199 I 260 s cebCap1.NW_016107633v1 1604778 543 - 2680843 ATCTGGTCTGTTAAGTGGATTAATTCAAATTTG---------TG-------CTAAGGATTTTAATT-GGTAGAAATAAAACTCTAGAC-----AATTTT--ATTTAGGGTCTAAATTA-TTTTGAAATCCCCA----G-TAGGGTAGTT-TCTTATCTTTTGGTTACATTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTAGGGAGAAGGAGCCCTGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAAGCAATAGAGAATCAGGAGCACAGGAGAGGTAAAACTTCAGCTGTTTACTGTTCCTTAATTGACTGATCAATGTTTTCCACTCACTTTA-TTTTCA-TTAAAAGGGTTTACTTCAGATGAATGATCCCAGAAAA-TT-AAACTGAACGTAAT----AGAATGTTTGGTCTTTCAAATTTGATTCAAA---GTAT--TAGTGTTGTGGGTAT---AGATTTT--TGGGTATTGCACAGGCtttgtttt---aggt---ttttcggtttgtttgcttg i cebCap1.NW_016107633v1 C 0 I 4 s aotNan1.NW_018505377v1 353667 543 - 4471408 ATCTAGTCTGTTAAGTGGATTAATTCAAATTTG---------TG-------CTAAGGATTTGAATT-GGTAGAAATAAAACTCTAGAC-----GATTTT--ATTTAGGGTCTAAATTA-TTTTGAAATCCCCA----G-TAGGGTAGTT-TCTTATCTTTTGGTTACATTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTACAGACCGCCTCAGCCCACCTACCTGCTCCAGCACCTGTTGGGAGAAGGAGCCCTGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAAGCAATAGAGAATCAGGAGCACAGGAGAGGTAAAACTTCAGCTGTCTACTGTTCCTTAATTGACTGATCAATGTTTTCCACTCACTTTA-TTTTCA-TTAAAAGGGTTTACTTCAGATGAATGGTCCCAGAAAA-TT-AAACTGAACGTGAT----AGAATGTTTGGTCTTTCAAATTTGATTCAAA---GTAT--TAGTGTTATGGGTAT---AGATTTT--TGGGTATTGCACAGGTtttgtttt---aggt---tttttggtttgtttgcttg i aotNan1.NW_018505377v1 C 0 I 4 s micMur3.chr22 3949933 545 - 30143674 CTCTGGTCTAATAAGTAGATTGATTCAAATTTG---------TGCTTTGTGCTAAGGATTTGAATT-GGTAGAAATAACT--CTAGAC-TTTTTTTTTT--TTTAAGGGTCTAGATTA-TTTTGAAATCCCCA----G-TAGGGTAGTT-CCTTACCTTTTGGTTACGTTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTACAGACGGCCTCAGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGCCCTGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAAGCAGTAGAGAATCAAGAGCACAGGCGAGGTAGAACTTTAGCTTTTTACTGTTTCTCAATTGACTGATCAACATTTTCTGCTCACCTTA-TTTTCA-TTAAAAGGATTTACTTCATGTGAATGATCCTAGAAGGTTT-AAACTGAACTCGAT----AGAATGTTCAGTCTTTCAGATTTGACTCAAAGTGGTGG--TGGTGGGGTTA--AT---AGTTTTT--TGGACATTGCATAGGTTTTGGTTT---CAGTTG-TTTTTTCC----------- i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 566688 533 + 2501019 CTCTGGTCTAATAAGCAGATTGATTCAAATTTG---------TGCTTTGTCCTAAGGATTTGAATT-GGTAGAAATAACT--CTAGAC----TTTTTTT--TTTAAGGGTCTAGATTA-TTTTGAAATCCCCA----G-TAGGGTAGTT-CCTTACCTTTTGGTTACATTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACCGCCTCAGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGCCCCGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAAGCAGTAGAGAATCAAGAGCACAGGCGAGGTAGAACTTTAGCTTTTTAATGTTTCTCAATTGACTGATCAGCATTTTCTGCTCACCTTA-TTTTCA-TTAAAAGGATTTACTTCATGTGAATGATCCCGGAAGGTTT-AAACTGAACTGGAT----AGAATGTTCAGTCTT----ATTTGACTCGAA---GTGG--GGGGGAGGTTA--AT---AGCTTTT--TGGATGTTGCACAGGTTTTGGTTT---CAGT---TTTTTTCC----------- i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5467865 527 + 5549422 CTCGGCTTGAATAAGTAGTTTAATTCAAATTTG---------TGCTTTGTGCTAGCAATTTGAATTCCGTAAAAATAACT--CTAGACATTTTTTTTTT--TTTAATGGTCTAGATTA-TTTTGAAATCCCCA----A-TAGGGTAGTT-TCTTACCTTTTGGTTACATTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTACAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGCCCTGTATCAACCAGGCCTTTGCCATCTACCAGCCAAAAAGCAGTAGAGAATCAAGAGCACAGGCGAGGTAGAACTTTAGCTATTTATTGTTTGTTAATTAACTAATCAATAATTTCTGCTCACCTTA-TTTTCA-TTAAAAGGATTTA---CATGTGAATGATCCCAGAAAGCTT-AAAATGAACTTCAT-----GACTATGCAGTCTTTCAGATTTGACTCAAA---GT------------------C---AGTTTTT--TAGACATCATGCTTTTTTTCTTTG---GGGTTATTTTTTTCC----------- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111083377 518 - 145441459 CACTGGTTTAATAA---AATGAATTCAGTTTTA---------TG-------CTAAGGATTTAAATT-GGCAG-AATAAAATTCTATAC-----TTACTT--TTATAAGGTCTAAATGG-TTTTGAAATCCCAG----GTTAGGGTAGTT-TATTATCTTTTGGTTACATTTTAGGTCGATCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGTCCAACCATGGAACAAGCAGTACAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGCCCTGTACCAGCCAGGCCTTTGCCACCTACCAGCCAGAAAGCAATAGACAACCAAGAGCACAGGCGAGGTAGAACTG-AGCTGTTTCCTGTTCCTGCACTG--TGATCGTTCTCATCTCCTCA-------TGACA-CCAGGAGTGT-TACTTTATATGAATGGTGCTAGCAGG-TTGAAGCTGAACTTTATTTTAATAGTGTTCAGTCTTTCAAATTTGATTCTAA---GTGg--tgtgtgtatgtgtgtgtgtgtgtTA--TGGATATTGCA-----------------GGT---GTTCTCATCTCCC------ i mm10.chr7 C 0 I 1 s canFam3.chr1 4604695 531 - 122678785 CTCTGATCTAATAAATAGATAAATTCAGATTTG---------TG-------CTAAAGATATAAATT----AGAAATAAAACTGTAGGC------ATTTT--TTTGAGGGTCTAGATTA-TTTTGAAATCCCCAGAGGA-TAGGGTAGTT-TCTTATCTTTTGGTTACGTTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTACAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGCCCTGTATCAACCAGGCCTTTACCATCTACCAGCCAAAAAGCAATAGAGAATCAAGAGCACAGGCGAGGTAGAACTTTAGCTGTTTATTATTCATTAATTGACTGATCAACATTTTCCATTCACCTTATTTTTCA-TTAAAAAGATATATTGTATATGAATGATCCTAGAAGGTTT-AAACTGAACTTGAT----AAAATGTTCAGTCTTTCACACTTGACTCAAA---GTGTGATGGTGGTGGGGGTAT---AGACTTG--TTG-----------TTTTTGTTTT---GGGT---TTCTTTGTTCTTCC----- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 309911 540 + 643850 CTCTGGTCTAGTAAATAGATTAATTCCAATCTG---------GG-------CTAAGGATTTAAACT-GGGAGAAATAAAACTGTGGCA-----TATTTTTCTTTTAGGGTCTAGGTTA-TTTTGAAATCCCCAAAGGA-TAGGATAGTA-TCTTATCTTTTGGTTACATTTTAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTACAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGCCCTGTATCAACCAGGCCTGTGCCATCTACCAGCCAAAAAGCAATAGAGAATCAAGAGCACAGGCGAGGTAGAATTTTAGCTATTTACTATTCCTTCATTGACTGATCAACATTTTCCATTCACCTTA-TTTTCATTTAAAAGGATTTACTTC--GTGAATGGTCCTAGAAAGTTT-AAAATGTACTTGAC----AGAATGTTCAGTCTTTCACATATGATTCAGA---GTGG--TGGTGGTG-GGGTAT---AGATTTTTGTGGGCATTGCACAGGTTTTGTTTTTGGGGGC---TTTCCC------------- i dasNov3.JH563638 C 0 C 0 a score=14875.000000 s hg38.chr19_GL383574v1_alt 63264 2 + 155864 CA s panTro5.chr19 36131883 2 + 61309027 CA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878012 2 + 64411610 CA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6295694 2 - 8369475 CA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888308 2 - 106955855 CA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200027 2 + 53671032 TA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34653773 2 + 59248254 TA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520360 2 - 13342542 TA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5450819 2 + 7714307 TA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29262791 2 + 50890351 tA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 881967 2 - 2385121 tA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2317249 2 + 4274983 TA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28552614 2 + 49145316 TA i calJac3.chr22 I 8 I 10 s cebCap1.NW_016107633v1 1605325 2 - 2680843 TA i cebCap1.NW_016107633v1 I 4 C 0 s aotNan1.NW_018505377v1 354214 2 - 4471408 TA i aotNan1.NW_018505377v1 I 4 C 0 s micMur3.chr22 3950478 2 - 30143674 CA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 567221 2 + 2501019 CA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5468392 2 + 5549422 CA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111083896 1 - 145441459 C- i mm10.chr7 I 1 C 0 s canFam3.chr1 4605226 2 - 122678785 CA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 310451 2 + 643850 CA i dasNov3.JH563638 C 0 C 0 e saiBol1.JH378197 5395816 260 + 8899380 I a score=79767.000000 s hg38.chr19_GL383574v1_alt 63266 7 + 155864 TTTCTAA s panTro5.chr19 36131885 7 + 61309027 TTTCTAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878014 7 + 64411610 TTTCTAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6295696 7 - 8369475 TTTCTAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888310 7 - 106955855 TTTCTAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200029 7 + 53671032 ATTCTGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34653775 7 + 59248254 ATTCTGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520362 7 - 13342542 ATTCTGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5450821 7 + 7714307 ATTCTGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29262793 7 + 50890351 ATTCTGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 881969 7 - 2385121 ATTCTGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2317251 7 + 4274983 ATTCTAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28552626 6 + 49145316 -TTTTTA i calJac3.chr22 I 10 C 0 s saiBol1.JH378197 5396076 6 + 8899380 -TTTCGA i saiBol1.JH378197 I 260 C 0 s cebCap1.NW_016107633v1 1605327 6 - 2680843 -TTTCTA i cebCap1.NW_016107633v1 C 0 I 12 s aotNan1.NW_018505377v1 354216 6 - 4471408 -TTTCTA i aotNan1.NW_018505377v1 C 0 I 8 s micMur3.chr22 3950480 7 - 30143674 TTTCTGA i micMur3.chr22 C 0 I 2 s proCoq1.NW_012149263v1 567223 7 + 2501019 TTTCTGA i proCoq1.NW_012149263v1 C 0 I 2 s otoGar3.GL873654 5468394 7 + 5549422 TTTCTGA i otoGar3.GL873654 C 0 I 2 s mm10.chr7 111083897 7 - 145441459 ATTCTAA i mm10.chr7 C 0 I 2 s canFam3.chr1 4605228 6 - 122678785 -TTTTGA i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 310453 7 + 643850 TTTCTAA i dasNov3.JH563638 C 0 C 0 a score=20419.000000 s hg38.chr19_GL383574v1_alt 63273 6 + 155864 --CTAT-GG s panTro5.chr19 36131892 6 + 61309027 --CTAT-GG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878021 6 + 64411610 --CTAT-GG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6295703 6 - 8369475 --CTAT-GG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888317 6 - 106955855 --CTAT-GG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200036 6 + 53671032 --CTAC-GG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34653782 6 + 59248254 --CTAC-GG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520369 6 - 13342542 --CTAC-GG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5450828 6 + 7714307 --CTAC-CG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29262800 6 + 50890351 --CTAC-CG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 881976 6 - 2385121 --CTAC-CG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2317258 6 + 4274983 --CTAC-GG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28552632 4 + 49145316 --TTAT--- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5396082 4 + 8899380 --TTAT--- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 354230 5 - 4471408 --TTATT-- i aotNan1.NW_018505377v1 I 8 C 0 s micMur3.chr22 3950489 6 - 30143674 --TTAC-AG i micMur3.chr22 I 2 C 0 s proCoq1.NW_012149263v1 567232 6 + 2501019 --TTAC-AG i proCoq1.NW_012149263v1 I 2 C 0 s otoGar3.GL873654 5468403 6 + 5549422 --CCAT-AG i otoGar3.GL873654 I 2 C 0 s mm10.chr7 111083906 6 - 145441459 --TTAT-AA i mm10.chr7 I 2 C 0 s canFam3.chr1 4605237 6 - 122678785 --TCAC-AG i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 310460 8 + 643850 CGTTAG-AG i dasNov3.JH563638 C 0 C 0 e cebCap1.NW_016107633v1 1605333 12 - 2680843 I a score=2409896.000000 s hg38.chr19_GL383574v1_alt 63279 130 + 155864 AAGTTTTT-GATGATGTACCCTGAGTTGATTTGGCACTTTGCATGTCTTCTTCTGTAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAACAAGAGACAAGTAGGTAAGTT s panTro5.chr19 36131898 130 + 61309027 AAGTTTTT-GATGATGTGCCCTGAGTTGATTTGGCACTTTGCATGTCTTCTTCTGTAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAGCAAGAGACAAGTAGGTAAGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878027 130 + 64411610 AAGTTTTT-GATGATGTGCCCTGAGTTGATTTGGCACTTTGCATGTCTTCTTCTGTAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAGCAAGAGACAAGTAGGTAAGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6295709 130 - 8369475 AAGTTTTT-GATGATGTGCCCTGAGTTGATTTGGCACTTTGCCTGTCTTCTTCTGTAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAACAAGAGACAAGTAGGTAAGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888323 130 - 106955855 AAGTTTTT-GATGATGTGCCCTGAGTTGATTTGGCACTTTGCATGTCTTCTTCTGTAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAACAAGAGACAAGTAGGTAAGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200042 130 + 53671032 AAGTTTTT-GATGATGTGCCCTGAGTTGATTTGACACTTTGCACGTCTTCTTCTATAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAACAAGAGACAAGTAGGTAAGTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34653788 130 + 59248254 AAGTTTTT-GATGATGTGCCCTGAGTTGATTTGACACTTTGCACGTCTTCTTCTATAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAACAAGAGACAAGTAGGTAAGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520375 130 - 13342542 AAGTTTTT-GATGATGTGCCCTGAGTTGATTTGACACTTTCCACGTCTTCTTCTATAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAACAAGAGACAAGTAGGTAAGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5450834 130 + 7714307 AAGTTTTT-GATGATGTGCCCTGAGTTGATTTGGCACTTTGCATGTCTTCTTCTATAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAACAAGAGACAAGTAGGTAAGTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29262806 130 + 50890351 AAGTTTTT-GATGATGTGCCCTGAGTTGATTTGGCACTTTGCATGTCTTCTTCTGTAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAACAAGAGACAAGTAGGTAAGTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 881982 130 - 2385121 AAGTTTTT-GATGATGTGCCCTGAGTTAATTTGGCACTTTGCATGTCTTCTTCTATAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAACAAGAGACAAGTAGGTAAGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2317264 130 + 4274983 AAGTTTTT-GATGATGTGCCCTGAGTTGATTTGGCACTTTGCATGTCTTCTTCTGTAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAACAAGAGACAAGTAGGTAAGTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28552636 128 + 49145316 --GTTTTT-GATCATGTGCCCTGAGTTGATTTGGCACTTTACATGTCTTCTTCTATAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAACGATAACAAGAGACAAGTAGGTAAGTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5396086 128 + 8899380 --GTTTGT-GATCATGTGCCCTGAGTTGATTTGGCACTTTGCATGTCTTCTTCTATAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAACAAGAGACAAGTAGGTAAGTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1605345 126 - 2680843 ATGTTTTT-GATCATGTG-CCTGAGTTGATTTGGCACTTTGCATG---TCTTCTATAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATGAACAACTCAGAAATGATAACAAGAGACAAGTAGGTAAGTT i cebCap1.NW_016107633v1 I 12 C 0 s aotNan1.NW_018505377v1 354235 127 - 4471408 ATGTTTTT-GATCATGTGCCCTGAGTTGATTTGGCACTTTGCATG---TCTTCTATAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAGTGAGCAACTCAGAAATGATAACAAGAGACAAGTAGGTAAGTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3950495 130 - 30143674 AAGTTTTT-GATTATGTGTCCTGAGTTGATTTGTCATTTTGCATGTCTTCTTCTATAGCCGAAGTACATAAAGTTTCAAGGCCAGAAAATGAGCAACTCAGAAATGACAGCAAGAGACAAGTTGGTAAGTT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 567238 130 + 2501019 AAGTTTTT-GATTATGTGTGCTGAGTTGACTTGTCATTTTGCATGTCTTCTTCTGTAGCCGAAGTACACAAAGTTTCAAGGCCAGAAAACGAGCAACTCAGAAATGATAGCAAGAGACAAGTTGGTAAGTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5468409 131 + 5549422 AAGGTTTTAGATTTTGTGTCCTGAGTTGATTTGTCATTTTGCATGTCTTTTTCTATAGCTGAAGTACATAAAGTATCAAGACCAGAAAATGAGCAACTCAGAAATGATAGCAAGAGACAAGTAGGTAAGTG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111083912 121 - 145441459 ATGTTTTT-GGTTATATATT----ATTGATTTGTTACTTTGTATATCTTTT--TATAGCTGAAGTACACAAAGTCCCAAGGCCAGAAAATGAGCAACTCAGAAATGA---CAAGAGGCAAGTAGGTAAGTT i mm10.chr7 C 0 I 153 s canFam3.chr1 4605243 127 - 122678785 AAGTTTTT-GATTTTGTGTCCTGAGCTCATCTGTGACTTTGTATA---TCTTTCATAGCTGAAGTACACAAAGTTTCAAGACCAGAAAATGAGCAACTCAGAAATGATAGCAAGAGACAAATAGGTAAGTT i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 310468 126 + 643850 AAATTTTT-GATTATGTGTCCTAAGTTGATTTGTTACTTTGCAC----TCTACTATAGCTGAAGCACACAAAGTCTCAAGGCCAGAAAATGAGCAACTCAGAAATGATAGCAAGAGACAAGTAGGTAAGTT i dasNov3.JH563638 C 0 I 1 a score=541910.000000 s hg38.chr19_GL383574v1_alt 63409 32 + 155864 CTTGGATCTAAAAGTCATATTCTATGCTTCTC s panTro5.chr19 36132028 32 + 61309027 CTTGGATCTAAAAGTCATATTCTATGCTTCTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878157 32 + 64411610 CTTGGATCTAAAAGTCATATTCTATGCTTCTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6295839 32 - 8369475 CTTGGATCTAAAAGTCATATTCTATGCTTCTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888453 32 - 106955855 CTTGGATCTGAAAGTCATATCCTATGCTTCTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200172 32 + 53671032 CTTGGATCCGAAAGTCATATCCTATGCTTCTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34653918 32 + 59248254 CTTGGATCCGAAAGTCATATCCTATGCTTCTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520505 32 - 13342542 CTTGGATCCGAAAGTCATATCCTATGCTTCTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5450964 32 + 7714307 CTTGGATCCGAAAGTCATATCCTATGCTTCTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29262936 32 + 50890351 CTTGGATCCGAAAGTCATATCCTATGCTTCTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 882112 32 - 2385121 CTTGGATCCGAAAGTCATATCCTATGCTTCTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2317394 32 + 4274983 CTTGGATCCGAAAGTCATATCCTATGCTTCTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28552764 30 + 49145316 CTTGGATCTGAAAGTCATATCCTATGC--CTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5396214 32 + 8899380 CTTGGATCTGAAGGTCATATTCTATGCCTCTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1605471 32 - 2680843 CTTGGATCTGAAAGTCATATTCTATGCCTCTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 354362 32 - 4471408 CTTGGATCTGAAAGTCATATCCTATGCCTCTC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3950625 32 - 30143674 CTTGAATCTGAAAGTCATATCCTGTGCTTCTC i micMur3.chr22 C 0 I 9 s proCoq1.NW_012149263v1 567368 32 + 2501019 CTTGAATCTGAAAGTCATATCCTGCGCTTCTC i proCoq1.NW_012149263v1 C 0 I 1482 s otoGar3.GL873654 5468540 32 + 5549422 CTTGAATCTGAAAGTCATATCGTGTGCTTGTC i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111084186 32 - 145441459 CCTGGATCTGAATGCCATATGCCATGGATCTC i mm10.chr7 I 153 C 0 s canFam3.chr1 4605371 32 - 122678785 TTTGAATCTGAAAGCCATATTCTGCACTTCCC i canFam3.chr1 I 1 I 1 s dasNov3.JH563638 310595 29 + 643850 TTTGGGTCTGAAAACTATAT---GTGCTTCTT i dasNov3.JH563638 I 1 C 0 a score=189429.000000 s hg38.chr19_GL383574v1_alt 63441 14 + 155864 AACAGGGAGAA-TAT s panTro5.chr19 36132060 14 + 61309027 AACAGGGAGAA-TAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878189 14 + 64411610 AACAGGGAGAA-TAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6295871 14 - 8369475 AACAGGGAGAA-TAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888485 14 - 106955855 AACAGGGAGAA-CAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200204 14 + 53671032 AACAGGGAGAA-TAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34653950 14 + 59248254 AACAGGGAGAA-TAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520537 14 - 13342542 AACAGGGAGAA-TAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5450996 14 + 7714307 AACAGGGAGAA-TAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29262968 14 + 50890351 AACAGGGAGAA-TAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 882144 14 - 2385121 AACAGGGAGAA-TAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2317426 14 + 4274983 AACAGGGAGAA-TAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28552794 14 + 49145316 AAGAGAGAAAA-CAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5396246 14 + 8899380 AACAGGGAGAA-CAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1605503 14 - 2680843 AACAGGGAGAA-CGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 354394 14 - 4471408 AACAGGGAGAA-CAT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5468573 14 + 5549422 AATAGGGAGAA-TAC i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111084218 15 - 145441459 AATAAGAGGAACTAT i mm10.chr7 C 0 C 0 s canFam3.chr1 4605404 14 - 122678785 ATTAGAAAGAA-CAT i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 310624 14 + 643850 AGTGGGGAGAA-CAT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950657 9 - 30143674 I a score=834675.000000 s hg38.chr19_GL383574v1_alt 63455 68 + 155864 TTTAAATATATGATACATAATTACTAT----AAAAAAATgaaag------------------------gcggg---------------------------------ggttgtg-actgta--------aaggaggagc s panTro5.chr19 36132074 68 + 61309027 TTTAAATATATGATACATAATTACTAT----AAAAAAATgaaag------------------------gcggg---------------------------------ggttgtg-actgta--------aaggaggagc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878203 68 + 64411610 TTTAAATATATGATACATAATTACTAT----AAAAAAATgaaag------------------------gcggg---------------------------------ggttgtg-actgta--------aaggaggagc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6295885 68 - 8369475 TTTAAATATATGATACATAATTACTAT----AAAAAAATgaaag------------------------ccggg---------------------------------ggttgtg-actgta--------aaggaggagc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888499 68 - 106955855 TTTAAATGTATGATACATAATTACTAT----AAAAAAATgaaag------------------------gcggg---------------------------------ggttgtg-actgta--------aaggaggagc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200218 68 + 53671032 TTTAAATGTATGATACATAATTACTAT----AAAAAAaagaaag------------------------gtggg---------------------------------ggttgtg-actcta--------aaggaggagc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34653964 68 + 59248254 TTTAAATGTATGATACATAATTACTAT----AAAAAAaagaaag------------------------gtggg---------------------------------ggttgtg-actcta--------aaggaggagc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520551 68 - 13342542 TTTAAACGTATGATACATAATTACTAT----AAAAAAaagaaag------------------------gtggg---------------------------------ggttgtg-actcta--------aaggaggagc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5451010 68 + 7714307 TTTAAATGTATGATACATAATTACTAT----AAAAAAAAgaaag------------------------gtgga---------------------------------ggttgtg-actcta--------aaggaggagc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29262982 68 + 50890351 TTTAAATGTATGATACATAATTACTAT----AAAAAAaagaaag------------------------gtgag---------------------------------ggttgtg-actcta--------aaggaggagc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 882158 68 - 2385121 TTTAAATGTATGATACATAATTACTAT----AAAAAAAAgaaag------------------------gtgga---------------------------------ggttgtg-actcta--------aaggaggagc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2317440 70 + 4274983 TTTAAATGTATGATACGTAATTACTAT--AAAAAAAAaagaaag------------------------gtggg---------------------------------ggttgtg-actcta--------aaggaggaac i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28552808 68 + 49145316 TTTAAATGTATGATACATAATTACTAT----AAACAAATgaaag------------------------gcagg---------------------------------ggttgtg-actgta--------aaggaggagc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5396260 68 + 8899380 TTTAAATGTATGATACATAATTGCTAT----AAACAAATgaaag------------------------gcagg---------------------------------ggttgtg-actgta--------aaggaggagc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1605517 68 - 2680843 TTTAAATGTATGATACGTAATTACTAT----AAACAAATgaaag------------------------gcagg---------------------------------gattgtg-actgta--------aaggaggagc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 354408 68 - 4471408 TTTAAATGTATGATACATAATTACTAT----AAACAAATgaaag------------------------gcagg---------------------------------ggttgtg-actgta--------aaggaggagc i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3950666 67 - 30143674 TTTAAATACATGATACATAATTACTAT-----AATAATGTaagg------------------------gaggg---------------------------------gttggtg-attatg--------aaggatgaac i micMur3.chr22 I 9 C 0 s otoGar3.GL873654 5468587 67 + 5549422 TTTAAATATATGACACATAATTACTGC-----AGAAGATggaaa------------------------gcaag---------------------------------gtggggg-gctata--------agggaggaac i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111084233 64 - 145441459 TTCAAA-----AATGCATATTTGCTAC----AAAAAGAAAAAAG------------------------GTAGG---------------------------------AGTTGTGAACCTCA--------AAGGACTGAC i mm10.chr7 C 0 C 0 s canFam3.chr1 4605418 124 - 122678785 ---------TTGATGCATAATTGCTAT----TAAAAAATTAAAGCCTGTAgagtgcctgagtggctcagtgggttgaatgactgaccaactcttgattttggctcaggtcatg-atctcatgtgttgtgagatggagc i canFam3.chr1 C 0 I 109 s dasNov3.JH563638 310638 69 + 643850 TTTAAATGAGTAGTACCtaattattatttttttaaaaatGAAAG---------------------------TA---------------------------------ATTGAtg-tctata--------aaggagttgc i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I a score=811504.000000 s hg38.chr19_GL383574v1_alt 63523 54 + 155864 ac--aggggagtgtcactgtggtgacagaacagtcctttatcttgattgtggtggt s panTro5.chr19 36132142 54 + 61309027 ac--aggggagtgtcactgtggtgacagaacagtcctttatcttgattgtggtggt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878271 54 + 64411610 ac--aggggagtgtcactgtggtgacagaacagtcctttatcttgattgtggtggt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6295953 54 - 8369475 ac--aggggagtgtcactgtggtgacagaacagtcctttatcttgattgtggtggt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888567 54 - 106955855 ac--aggggaatgtcactgtggtgacagaacagtcctttatcttgattgtgatggt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200286 54 + 53671032 ac--aggggagtgtcactgtggtgacagaacagttctttatcttgattgtgatggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34654032 54 + 59248254 ac--aggggagtgtcactgtggtgacagaacagttctttatcttgattgtgatggt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520619 54 - 13342542 ac--aggggagtgtcactgtggtgacagaacagttctttatcttgattgtgatggt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5451078 54 + 7714307 ac--aggggagtgtcactgtggtgacagaacagttctttatcttgattgtgatggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29263050 54 + 50890351 ac--aggggagtgtcactgtggtgacagaacagttctttatcttgattgtgatggt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 882226 54 - 2385121 ac--aggggagtgtcactgtggtgacagaacagttctttatcttgattgtgatggt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2317510 54 + 4274983 ac--aggggagtgtcactgtggtaacagaacagttctttatcttgattgtgatggt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28552876 54 + 49145316 ac--aggggagtgtcactgtggtgacagaacagttctttatcttgattgtgatggt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5396328 54 + 8899380 ac--aggggagtgtcactgaggtgacagaacagttctttatcttgattgtgatggt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1605585 54 - 2680843 ac--aggggagtgtcactgtggtgacagaacagttctttatcttgattgtgatggt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 354476 54 - 4471408 ac--aggggagtgtcactgtggtgacagaacagttctttatcttgattgtgatggt i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3950733 54 - 30143674 ac--aagtgagtgtcattgtggtgacagtatagttctttatcttggttatggtggt i micMur3.chr22 C 0 I 1018 s otoGar3.GL873654 5468654 54 + 5549422 cc--aggggagtgtcattgtgatgacagactagttcttcgtcttgattatggaggt i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111084297 17 - 145441459 CCCAAGGGGAATG-------------------------------GATT-------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4605651 54 - 122678785 AC--TAGGGACTTtcattgtggtaacagaacatttctttatcttggttatgatagt i canFam3.chr1 I 109 C 0 s dasNov3.JH563638 310707 54 + 643850 ac--aagggagtccctttgtggtggcaaagcaattctttatctagattatgatgat i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I a score=1242144.000000 s hg38.chr19_GL383574v1_alt 63577 100 + 155864 agttttgcaaatctat-------atatg--gtagaacatcatagaa------ctatgcat-aaagacataccaaaaaatgagtacatgtacaaactg------------gtgacatctga-gcaaggtc s panTro5.chr19 36132196 100 + 61309027 ggttttgcaaatctat-------atatg--gtagaacatcatagaa------ctatgcat-aaagacataccaaaaaatgagtacatgtacaaactg------------gtgacatctga-gcaaggtc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878325 100 + 64411610 ggttttgcaaatctat-------atatg--gtagaacatcatagaa------ctatgcat-aaagacataccaaaaaatgagtacatgtacaaactg------------gtgacatctga-gcaaggtc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296007 100 - 8369475 ggttttgcaaatctat-------atatg--gtagaacatcatagaa------ctatgcat-aaagacataccaaaaaatgagtacatgtacaaactg------------gtgacatctga-gcaaggtc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888621 100 - 106955855 ggttttgcaaatctat-------atatg--gtagaacatcatagaa------ctatgcat-aaagacataccaaaaaatgagtacatgtacaaactg------------gtgacatctga-gcaaggtc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200340 100 + 53671032 ggttatgcaaatctat-------atatg--gtagaacatcatagaa------ctatgcat-aaagacatatcagaaaatgagtacatgtacaaactg------------gtgacatctga-gcaaggtc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34654086 100 + 59248254 ggttatgcaaatctat-------atatg--gtagaacatcatagaa------ctatgcat-aaagacatatcagaaaatgagtacatgtacaaactg------------gtgacatctga-gcaaggtc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520673 100 - 13342542 ggttatgcaaatctat-------atatg--gtagaacatcatagaa------ctatgcat-aaagacatatcagaaaatgagtacatgtacaaactg------------gtgacatctga-gcaaggtc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5451132 100 + 7714307 ggttatgcaaatctat-------atgtg--gtagaacatcatagaa------ctatgcat-aaagacatatcagaaaatgagtacatgtacaaactg------------gtgacatatga-gcaaggtc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29263104 100 + 50890351 ggttatgcaaatctat-------atatg--gtagaacatcatagaa------ctatgcat-aaagacatatcagaaaatgagtacatgtacaaactg------------gtgacgtctga-gcaaggtc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 882280 100 - 2385121 ggttatgcaaatctat-------atatg--gtagaacatcacagaa------ctatgcat-aaagacatatcagaaaatgagtacatgtacaaactg------------gtgacatatga-gcaaggtc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2317564 100 + 4274983 ggttatgcaaatctat-------atatg--gtagagcatcatagaa------ctatgcat-aaagacataccagaaaatgagtacatgtacaaactg------------gtgacatctga-gcaaggtc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28552930 113 + 49145316 ggttatgcaaatctat-------acatg--gtagaacatcatagaa------ctatgcataaaagacataccaaaaaatgagtacatgtacaaactggctactccagcagtgacatctga-gcaaggtc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5396382 100 + 8899380 ggttatgcaaatctat-------atgtg--gtagaacatcatagaa------ctatgcat-aaagacataccaaaaaatgagtacatgtacaaactg------------gtgacatctga-gcaaggtc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1605639 100 - 2680843 ggttgtacaaatctat-------atatg--gtagaacgtcatagaa------ctatgcat-aaagacataccaaaaaatgtgtacatgtacaaactg------------gtgacatctga-gcaaggtc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 354530 100 - 4471408 ggttatgcaaatctat-------atatg--gtagaacatcatagaa------ctatgcat-aaagacataccaaaaaatgagtacatgtacaaactg------------gtgacatctga-gcaagatc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5468708 110 + 5549422 ggttatgtgaatctgtgtctgtgataag--atAAAAAGTCATTGTAAAGATGTCATAGGT-AAAGACATA--AAAAGAT-ACTGTACATAAAGACAT------------ACAGAAAATGA-GCTAGGCC i otoGar3.GL873654 C 0 I 119 s mm10.chr7 111084314 97 - 145441459 --TGTTGTAAGTCTGT-----TCTTATA--GCAAACTGTTGCTGGC------CTCTACAT-AAATACATGCCTGAAGATGCTTGT---CAGAAATTA------------GTAACATCTGA-GTAAGATC i mm10.chr7 C 0 C 0 s canFam3.chr1 4605705 102 - 122678785 cattatatagatgtat-------acatgtagcaaaatgttatataa------ctacatat-aaagagacaccagaaaatgagtatctgcaaaacctg------------ttgaaatcaga-attaggtt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 310761 101 + 643850 ggttatggaaatccat-------acatg--atggcatgttatagaa------ctagatac-agacatacaaaatataatgattttatgcaaaaactg------------gtgaaatctgaggaaaggtc i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I a score=1155091.000000 s hg38.chr19_GL383574v1_alt 63677 103 + 155864 tgtagtttagttaattagattgtgcctgtgtcggtttcttggtttcgataatgtaccataattatataagatgtgactgttggagtttgggaagtt-gggtgat s panTro5.chr19 36132296 103 + 61309027 tgtagtttagttaattagattgtgcctgtgtcggtttcttggtttcgataatgtaccataattatataagatgtgactgttggagtttgggaagtt-gggtgat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878425 103 + 64411610 tgtagtttagttaattagattgtgcctgtgtcggtttcttggttttgataatgtaccataattatataagatgtgactgttggagtttgggaagtt-gggtgat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296107 103 - 8369475 tgtagtttagttaattagattgtgcctgtgtcagtttcttggtttcgataatgtaccataattatataagatgtgactgttggagtttgggaagtt-gggtgat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888721 103 - 106955855 tgtagtttagttaattagattgtgcctgtgtcagtttcttggttttgataatgtaccataattatataagatgtgactgttggagtttgggaagtt-gggtgat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200440 103 + 53671032 tatagtttagttaattagattgtgcctgtgtcagtttcttggttttgataatgtaccataattatataaggtgtgactgttggagtttgggaagtt-gggtgat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34654186 103 + 59248254 tatagtttagttaattagattgtgcctgtgtcagtttcttggttttgataatgtaccataattatataaggtgtgactgttggagtttgggaagtt-gggtgat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520773 103 - 13342542 tatagtttagttaattagattgtgcctgtgtcagtttcttggttttgataatgtaccataattatataaggtgtgactgttggagtttgggaagtt-gggtgat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5451232 103 + 7714307 tatagtttagttaattagattgtgcctgtgtcagtttcttggttttgataatgtaccataattatataaggtgtgactgttggagtttgggaagtt-gggtgat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29263204 103 + 50890351 tgtagtttagttaattagattgtgcctgtgtcagtttcttggttttgataatgtaccataattatataaggtgtgactgttggagtttgggaattt-gggtgat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 882380 103 - 2385121 tatagtttagttaattagattgtgcctgtgtcagtttcttggttttgataatgtaccataattatataaggtgtgactgttggagtttggaaagtt-gggtaat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2317664 103 + 4274983 tatagtttagttaattagattgtgcctgtgtcagtttcttggttttgataatgtaccataattatataaggtgtgactgttggagtttgggaagtt-gggtgat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28553043 95 + 49145316 tgcagtttagttaattagattatgcctgtgttgg--------ttttcataatataacataggtatacaagatgtcgctgctggagtttgggaagtt-ggttgat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5396482 103 + 8899380 tgcagtttagttaattagattgtgcctgtgttggtttcttgattttgataatataacatagttatgcaagatgtcactgctggagtttgggaagtt-ggttaat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1605739 101 - 2680843 tgcagtttagttaattagattgtgcctgtgttggtttcttggttttgataatataacatagttatac---ttatcactgctagagtttgggaagttgggttgat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 354630 103 - 4471408 tgcggtttagttaattagattgtgcctgtgttggtttcttggttttgataatataacatatttatacaaaatgtcactgctggagtttgggaagtt-ggttgat i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111084411 93 - 145441459 CATAGTTTGGTTAATTAAACTCTGACAGTGTGTGCTCTCTAGGTTTGCTGGTGTGCAGCAGTCA-----AATGTTACTGTTGGGAAC---AAAGCT-GG--AAT i mm10.chr7 C 0 C 0 s canFam3.chr1 4605807 91 - 122678785 tatagt----gtaattatggtgtgccaatgtcaatttcctggttttggtaatgtt-----gttaaggaagatattaccgtttgag---gggaagct-agattat i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 310862 95 + 643850 -----ttcagttaattatattgtcccaatgtcaatttcctgtttttgataatgtacagaagttatataagatgtcactgttggaa---gggaagct-aggtgat i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e otoGar3.GL873654 5468818 119 + 5549422 I a score=581278.000000 s hg38.chr19_GL383574v1_alt 63780 65 + 155864 gggcacaagggacgactctgaactagtttttcaatttttc--ttttctataattacttta--------------------aaa--ta--aa s panTro5.chr19 36132399 65 + 61309027 gggcacaagggacgactctgaactagtttttcaatttttc--ttttctataattacttta--------------------aaa--ta--aa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878528 65 + 64411610 gggcacaagggacgactctgaactagtttttcaatttttc--ttttctataattacttta--------------------aaa--ta--aa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296210 65 - 8369475 gggcacaagggacgactctgaactagtttttccatttttc--ttttctataattacttta--------------------aaa--ta--aa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888824 65 - 106955855 gagcacaaaggacgactctgaactagtttttcaatttttc--ttttctataattacttta--------------------aaa--ta--aa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200543 63 + 53671032 gggcacaaagggccactctgaactagtttttcaatttttc--ttttctataattacttga--------------------aaa--ta---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34654289 63 + 59248254 gggcacaaagggccactctgaactagtttttcaatttttc--ttttctataattacttga--------------------aaa--ta---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520876 63 - 13342542 gggcacaaagggccactctgaactagtttttcaatttttc--ttttctataattacttga--------------------aaa--ta---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5451335 63 + 7714307 gggcacaaagggccactctgaactagtttttcaatttttc--ttttctataattacttga--------------------aaa--ta---- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29263307 63 + 50890351 gggcacaaagggccactctgaactagtttttcaatttttc--ttttctataattacttga--------------------aaa--ta---- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 882483 63 - 2385121 gggcacaaagggccgctctgaactagtttttcaatttttc--ttttctataattacttga--------------------aaa--ta---- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2317767 65 + 4274983 gggcacaaagggccactctgaactagtttttcaatttttc--ttttctataattacttga--------------------aaa--taaa-- i colAng1.NW_012111697v1 C 0 I 1825 s calJac3.chr22 28553138 66 + 49145316 gggcacaaaggaccactgtgaactagtttttccattttttc-ttgtcaattattgcttta--------------------aaa--tg--aa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5396585 65 + 8899380 gggcacaaagaaccactctgaactagtttttcaatttttt--ttgtctattattacttta--------------------aaa--tg--aa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1605840 66 - 2680843 gggcacaaaggaccactctgaactagtttttccattttttt-ctgtctattattacttta--------------------aaa--tg--aa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 354733 66 - 4471408 gggcacaaaggaccactctgaactagtttttcaattttttc-ttgtctattactacttta--------------------aaa--tt--aa i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5468937 84 + 5549422 aggcac-agggattacttgaacccaggagttcaagactgcagtgagctatgattgccccactgcactgcgcttggtcaacaga--ga---- i otoGar3.GL873654 I 119 C 0 s mm10.chr7 111084504 57 - 145441459 -GAACTGTAGCACCACAATGTGCTTTTCTTTTCATTCTT---ATATCTGTAGTTAAGTTA--------------------A---------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4605898 64 - 122678785 gggcatataggaccactatattctattttttcaaatttt---ttgtgtctaaatgtctta--------------------aaaGGTA---- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 310957 61 + 643850 gtttacatgggtctactct----tattttttcaacttctt--gtgtccataattatttca--------------------aac--ta--aa i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I a score=72950.000000 s hg38.chr19_GL383574v1_alt 63845 10 + 155864 aagatttttt- s panTro5.chr19 36132464 10 + 61309027 aagatttttt- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878593 9 + 64411610 aacattttt-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296275 10 - 8369475 aagattttta- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888889 10 - 106955855 aagatttttt- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200606 10 + 53671032 aagatttttt- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34654352 10 + 59248254 aagatttttt- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520939 9 - 13342542 aagattttt-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5451398 10 + 7714307 aagatttttt- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29263370 10 + 50890351 aagatttttt- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 882546 10 - 2385121 aagatttttt- i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553204 10 + 49145316 aagattttta- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5396650 10 + 8899380 aagATGTTTT- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1605906 10 - 2680843 aagatttttt- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 354799 10 - 4471408 aagattttta- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5469021 10 + 5549422 gacactttct- i otoGar3.GL873654 C 0 I 25 s mm10.chr7 111084561 6 - 145441459 ----TTTTTC- i mm10.chr7 C 0 I 1 s canFam3.chr1 4605962 10 - 122678785 TTGTTTTttt- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 311018 10 + 643850 -aaacttcata i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=3285.000000 s hg38.chr19_GL383574v1_alt 63855 1 + 155864 a s panTro5.chr19 36132474 1 + 61309027 a i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296285 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888899 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200616 1 + 53671032 a i rheMac8.chr19 C 0 C 0 s calJac3.chr22 28553214 1 + 49145316 a i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5396660 1 + 8899380 C i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1605916 1 - 2680843 a i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 354809 1 - 4471408 a i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5469056 1 + 5549422 A i otoGar3.GL873654 I 25 C 0 s mm10.chr7 111084568 1 - 145441459 G i mm10.chr7 I 1 C 0 s canFam3.chr1 4605972 1 - 122678785 a i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 311028 1 + 643850 a i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e chlSab2.chr6 29263380 0 + 50890351 C e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e manLeu1.NW_012102454v1 882556 0 - 2385121 C e cerAty1.NW_012005268v1 5451408 0 + 7714307 C e macNem1.NW_012011689v1 4520948 0 - 13342542 C e macFas5.chr19 34654362 0 + 59248254 C e panPan2.chr19 39878602 0 + 64411610 C a score=3323.000000 s hg38.chr19_GL383574v1_alt 63856 4 + 155864 aaaT s panTro5.chr19 36132475 4 + 61309027 aaaT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878602 4 + 64411610 aaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296286 4 - 8369475 aaaT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30200617 4 + 53671032 aaaT i rheMac8.chr19 C 0 C 0 s calJac3.chr22 28553215 4 + 49145316 aaTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5396661 1 + 8899380 A--- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1605917 4 - 2680843 aaaT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 354810 4 - 4471408 aaTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5469057 4 + 5549422 AACT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111084569 4 - 145441459 AAGT i mm10.chr7 C 0 C 0 s canFam3.chr1 4605975 4 - 122678785 cacc i canFam3.chr1 I 2 C 0 s dasNov3.JH563638 311029 4 + 643850 aaaT i dasNov3.JH563638 C 0 I 82 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e chlSab2.chr6 29263380 0 + 50890351 C e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e manLeu1.NW_012102454v1 882556 0 - 2385121 C e cerAty1.NW_012005268v1 5451408 0 + 7714307 C e macNem1.NW_012011689v1 4520948 0 - 13342542 C e macFas5.chr19 34654362 0 + 59248254 C e nomLeu3.chr10 63888900 0 - 106955855 C a score=11483.000000 s hg38.chr19_GL383574v1_alt 63860 4 + 155864 TTTA s panTro5.chr19 36132479 4 + 61309027 TTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878606 4 + 64411610 TTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296290 4 - 8369475 TTTA i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30200621 4 + 53671032 TTTA i rheMac8.chr19 C 0 C 0 s calJac3.chr22 28553219 4 + 49145316 TTTA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1605921 4 - 2680843 TTTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 354814 4 - 4471408 TTTA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5469061 4 + 5549422 GATA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111084573 4 - 145441459 ACTA i mm10.chr7 C 0 C 0 s canFam3.chr1 4605979 4 - 122678785 atta i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311033 82 + 643850 I e chlSab2.chr6 29263380 0 + 50890351 C e saiBol1.JH378197 5396662 0 + 8899380 C e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e manLeu1.NW_012102454v1 882556 0 - 2385121 C e cerAty1.NW_012005268v1 5451408 0 + 7714307 C e macNem1.NW_012011689v1 4520948 0 - 13342542 C e macFas5.chr19 34654362 0 + 59248254 C e nomLeu3.chr10 63888900 0 - 106955855 C a score=31549.000000 s hg38.chr19_GL383574v1_alt 63864 9 + 155864 CTTTTCTGg s panTro5.chr19 36132483 9 + 61309027 CTTTTCTGg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878610 9 + 64411610 CTTTTCTGg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296294 9 - 8369475 CTTTTCTGg i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30200625 9 + 53671032 CCTTTCTGG i rheMac8.chr19 C 0 I 1 s saiBol1.JH378197 5396662 9 + 8899380 CTTTTCTGG i saiBol1.JH378197 C 0 I 16 s cebCap1.NW_016107633v1 1605925 9 - 2680843 CTTTTCTGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 354818 9 - 4471408 CTTTTCTGG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5469065 9 + 5549422 ACATACGGg i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111084577 9 - 145441459 TTTTTCTGG i mm10.chr7 C 0 I 1016 s canFam3.chr1 4605983 9 - 122678785 cattgctgg i canFam3.chr1 C 0 I 262 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311033 82 + 643850 I e chlSab2.chr6 29263380 0 + 50890351 C e calJac3.chr22 28553223 0 + 49145316 C e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e manLeu1.NW_012102454v1 882556 0 - 2385121 C e cerAty1.NW_012005268v1 5451408 0 + 7714307 C e macNem1.NW_012011689v1 4520948 0 - 13342542 C e macFas5.chr19 34654362 0 + 59248254 C e nomLeu3.chr10 63888900 0 - 106955855 C a score=2100.000000 s hg38.chr19_GL383574v1_alt 63873 1 + 155864 g s panTro5.chr19 36132492 1 + 61309027 g i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878619 1 + 64411610 g i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296303 1 - 8369475 g i gorGor5.CYUI01015150v1 C 0 C 0 s cebCap1.NW_016107633v1 1605934 1 - 2680843 G i cebCap1.NW_016107633v1 C 0 I 20 s aotNan1.NW_018505377v1 354827 1 - 4471408 G i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5469074 1 + 5549422 g i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311033 82 + 643850 I e mm10.chr7 111084586 1016 - 145441459 I e chlSab2.chr6 29263380 0 + 50890351 C e canFam3.chr1 4605992 262 - 122678785 I e saiBol1.JH378197 5396671 16 + 8899380 I e calJac3.chr22 28553223 0 + 49145316 C e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e manLeu1.NW_012102454v1 882556 0 - 2385121 C e cerAty1.NW_012005268v1 5451408 0 + 7714307 C e macNem1.NW_012011689v1 4520948 0 - 13342542 C e macFas5.chr19 34654362 0 + 59248254 C e rheMac8.chr19 30200634 1 + 53671032 I e nomLeu3.chr10 63888900 0 - 106955855 C a score=190382.000000 s hg38.chr19_GL383574v1_alt 63874 288 + 155864 cccggcacagtggctcacgcctgtaattccagcactttgggaggccggggcgggcggatcacg--aggtcaggagctcgagaccagcctggctaacatggtgaaaccccgtctccactaaaaatacaaaaaattagccgggcgcagtggcgggcgc-ctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaactggggaggtggagcttgcagtgagccgagattgctccactgcactccagcctaggcgacagagccagactctgtctcaaaaaaaaa s panTro5.chr19 36132493 286 + 61309027 cccggcacggtggctcacgcctgtaatcccagcactttgggaggccggggcgggcggatcaca--aggtcaggagctcgagaccagcctggctaacatggtgaaaccccgtctccactaaaaatacaaaaaattagccgggcgcagtggcgggcgc-ctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaactggggaggtggagcttgcagtgagccgagattgctccactgccctccagcctaggcgacagagccaga--ctgtctcaaaaaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878620 287 + 64411610 cccggcacggtggctcacgcctgtaatcccagcactttgggaggccggggcgggcggatcacg--aggtcaggagctcgagaccagcctggctaacatggtgaaaccccgtctccactaaaaatacaaaaaattagccgggcgcagtggcgggcgc-ctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaactggggaggtggagcttgcagtgagccgagattgctccactgccctccagcctaggcgacagagccagactctgtctc-aaaaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296304 284 - 8369475 cccggc-cggtggctcacgcctgtaatcccagcactttgggaggccggggcaggcggatcaca--aggtcaggagctcgagaccagcctggctaacatggtgaaaccccgtctccactaaaaatacaaaaaattagccgggcgcagtggcgggcgc-ctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaactgaggaggtggagctttcagtgagccgagattgctccactgcactccagcctaggcgacagagccagactctgtctc---aaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s otoGar3.GL873654 5469075 274 + 5549422 gcgggtggggtggctcacaccggtcatcctagcactctgacaggccaagac-gatggattgcttcagctcgggagttctagaccagcctaagcaaga--gcgagtccctgcgtc-----------taaaaaaacagctttgcgctgtagcaggggctttgcagtcccagctacttgggaggctgaggcaagagaatcgcttgagcccaagagttttaagttgctgtgagctatgat---gccattgcactctactggggacaagaaagtgagatttgatctcaaaaaaaaa i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311033 82 + 643850 I e mm10.chr7 111084586 1016 - 145441459 I e chlSab2.chr6 29263380 0 + 50890351 C e canFam3.chr1 4605992 262 - 122678785 I e aotNan1.NW_018505377v1 354828 0 - 4471408 C e cebCap1.NW_016107633v1 1605935 20 - 2680843 I e saiBol1.JH378197 5396671 16 + 8899380 I e calJac3.chr22 28553223 0 + 49145316 C e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e manLeu1.NW_012102454v1 882556 0 - 2385121 C e cerAty1.NW_012005268v1 5451408 0 + 7714307 C e macNem1.NW_012011689v1 4520948 0 - 13342542 C e macFas5.chr19 34654362 0 + 59248254 C e rheMac8.chr19 30200634 1 + 53671032 I e nomLeu3.chr10 63888900 0 - 106955855 C a score=4095.000000 s hg38.chr19_GL383574v1_alt 64162 1 + 155864 a s panTro5.chr19 36132779 1 + 61309027 a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878907 1 + 64411610 a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296588 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34654362 1 + 59248254 a i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520948 1 - 13342542 a i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5451408 1 + 7714307 a i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29263380 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 882556 1 - 2385121 a i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5469349 1 + 5549422 a i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311033 82 + 643850 I e mm10.chr7 111084586 1016 - 145441459 I e canFam3.chr1 4605992 262 - 122678785 I e aotNan1.NW_018505377v1 354828 0 - 4471408 C e cebCap1.NW_016107633v1 1605935 20 - 2680843 I e saiBol1.JH378197 5396671 16 + 8899380 I e calJac3.chr22 28553223 0 + 49145316 C e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e rheMac8.chr19 30200634 1 + 53671032 I e nomLeu3.chr10 63888900 0 - 106955855 C a score=5005.000000 s hg38.chr19_GL383574v1_alt 64163 1 + 155864 a s panTro5.chr19 36132780 1 + 61309027 a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878908 1 + 64411610 a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296589 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888900 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34654363 1 + 59248254 a i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520949 1 - 13342542 a i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5451409 1 + 7714307 a i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29263381 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 882557 1 - 2385121 a i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5469350 1 + 5549422 a i otoGar3.GL873654 C 0 I 1725 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311033 82 + 643850 I e mm10.chr7 111084586 1016 - 145441459 I e canFam3.chr1 4605992 262 - 122678785 I e aotNan1.NW_018505377v1 354828 0 - 4471408 C e cebCap1.NW_016107633v1 1605935 20 - 2680843 I e saiBol1.JH378197 5396671 16 + 8899380 I e calJac3.chr22 28553223 0 + 49145316 C e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e rheMac8.chr19 30200634 1 + 53671032 I a score=28665.000000 s hg38.chr19_GL383574v1_alt 64164 7 + 155864 aaTTTTA s panTro5.chr19 36132781 7 + 61309027 aaTTTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878909 7 + 64411610 aaTTTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296590 7 - 8369475 aaTTTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888901 7 - 106955855 aaTTtta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34654364 7 + 59248254 aaTTTTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520950 7 - 13342542 aaTTTTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5451410 7 + 7714307 aaTTTTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29263382 7 + 50890351 aaTTTTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 882558 7 - 2385121 aaTTTTA i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311033 82 + 643850 I e otoGar3.GL873654 5469351 1725 + 5549422 I e mm10.chr7 111084586 1016 - 145441459 I e canFam3.chr1 4605992 262 - 122678785 I e aotNan1.NW_018505377v1 354828 0 - 4471408 C e cebCap1.NW_016107633v1 1605935 20 - 2680843 I e saiBol1.JH378197 5396671 16 + 8899380 I e calJac3.chr22 28553223 0 + 49145316 C e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e rheMac8.chr19 30200634 1 + 53671032 I a score=42145.000000 s hg38.chr19_GL383574v1_alt 64171 9 + 155864 CTTTTCTGG s panTro5.chr19 36132788 9 + 61309027 CTTTTCTGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878916 9 + 64411610 CTTTTCTGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296597 9 - 8369475 CTTTTCTGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888908 9 - 106955855 cttttctgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34654371 9 + 59248254 CCTTTCTGG i macFas5.chr19 C 0 I 1 s macNem1.NW_012011689v1 4520957 9 - 13342542 CCTTTCTGG i macNem1.NW_012011689v1 C 0 I 1 s cerAty1.NW_012005268v1 5451417 9 + 7714307 CCTTTCTGG i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29263389 9 + 50890351 CCTTTCTGG i chlSab2.chr6 C 0 I 1 s manLeu1.NW_012102454v1 882565 9 - 2385121 CCTTTCTGG i manLeu1.NW_012102454v1 C 0 I 1 s calJac3.chr22 28553223 9 + 49145316 CTTTTTTGG i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311033 82 + 643850 I e otoGar3.GL873654 5469351 1725 + 5549422 I e mm10.chr7 111084586 1016 - 145441459 I e canFam3.chr1 4605992 262 - 122678785 I e aotNan1.NW_018505377v1 354828 0 - 4471408 C e cebCap1.NW_016107633v1 1605935 20 - 2680843 I e saiBol1.JH378197 5396671 16 + 8899380 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e rheMac8.chr19 30200634 1 + 53671032 I a score=6006.000000 s hg38.chr19_GL383574v1_alt 64180 1 + 155864 A s panTro5.chr19 36132797 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878925 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296606 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888917 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200635 1 + 53671032 A i rheMac8.chr19 I 1 C 0 s macFas5.chr19 34654381 1 + 59248254 A i macFas5.chr19 I 1 C 0 s macNem1.NW_012011689v1 4520967 1 - 13342542 A i macNem1.NW_012011689v1 I 1 C 0 s cerAty1.NW_012005268v1 5451427 1 + 7714307 A i cerAty1.NW_012005268v1 I 1 C 0 s chlSab2.chr6 29263399 1 + 50890351 A i chlSab2.chr6 I 1 C 0 s manLeu1.NW_012102454v1 882575 1 - 2385121 A i manLeu1.NW_012102454v1 I 1 C 0 s calJac3.chr22 28553232 1 + 49145316 A i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311033 82 + 643850 I e otoGar3.GL873654 5469351 1725 + 5549422 I e mm10.chr7 111084586 1016 - 145441459 I e canFam3.chr1 4605992 262 - 122678785 I e aotNan1.NW_018505377v1 354828 0 - 4471408 C e cebCap1.NW_016107633v1 1605935 20 - 2680843 I e saiBol1.JH378197 5396671 16 + 8899380 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=137373.000000 s hg38.chr19_GL383574v1_alt 64181 20 + 155864 AAAAAATTCTACTTAGTGGT s panTro5.chr19 36132798 20 + 61309027 AAAAAATTCTACTTAGTGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878926 20 + 64411610 AAAAAATTCTACTTAGTGGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296607 20 - 8369475 AAAAAATTCTACTTAGTGGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888918 20 - 106955855 aaaaaattctacttagtggt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200636 20 + 53671032 AAAAAATTCTACTTAGTGAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34654382 20 + 59248254 AAAAAATTCTACTTAGTGAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520968 20 - 13342542 AAAAAATTCTACTTAGTGAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5451428 20 + 7714307 AAAAAATTCTACTTAGTGAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29263400 20 + 50890351 AAAAAATTCTACTTAGTGAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 882576 20 - 2385121 AAAAAATTCTACTTAGTGAT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553233 20 + 49145316 AAAAAAGTCTACTTAGTGGT i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 354828 20 - 4471408 AAAAAATTCTACTTAGTGGT i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311033 82 + 643850 I e otoGar3.GL873654 5469351 1725 + 5549422 I e mm10.chr7 111084586 1016 - 145441459 I e canFam3.chr1 4605992 262 - 122678785 I e cebCap1.NW_016107633v1 1605935 20 - 2680843 I e saiBol1.JH378197 5396671 16 + 8899380 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=1296976.000000 s hg38.chr19_GL383574v1_alt 64201 297 + 155864 AGGCC-tttttttt---------tctgaga---tggagtttcactcttgttacccaggctgtagtgcagtggtgtgatctcagctcacggcagcctccgcctcccgggttcaagtaattctcctgcctcagcctccctagtagctgggattacagccgcgtgccaccatacccagctaatttttgtatttttagtagaaac-agggctttgccatgttggccaggctggcctcaaactcctgaccttattt--tccacccacctcagcctcccgaagtatt-gggattat-aggcgtgagccaccgcacccagcc s panTro5.chr19 36132818 293 + 61309027 AGGCC--ttttttt---------tctgaga---tggagtttcactcttgttacccaggctgtagtgcagtggtgtgatctcagctcacggcag-ctccgcctcccgggttcaagtaattctcctgcctcagcctccctagtagctgggattacagccgcgtgccaccatacccagctaatttttgtatttttagtagaaac---ggctttgccatgttggccaggctggcctcaaactcctgaccttattt--tccacccacctcagcctcccgaagtatt-gggattat-aggcgtgagccaccgcacccagtc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39878946 294 + 64411610 AGGCC-tttttttt---------tctgaga---tggagtttcactcttgttacccaggctgtagtgcagtggtgtgatctcagctcacggcag-ctccgcctcccgggttcaagtaattctcctgcctcagcctccctagtagctgggattacagccgcgtgccaccatacccagctaatttttgtatttttagtagaaac---ggctttgccatgttggccaagctggcctcaaactcctgaccttattt--tccacccacctcagcctcccgaagtatt-gggattat-aggcgtgagccaccgcacccagcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296627 298 - 8369475 AGGCC-tttttttt---------tctgaga---tggagtttcactcttgttacccaggctgtagtgcagtggtgtgatctcggctcacggcagcctccgccttccgggttcaagtaattctcctgcctcagcctccctagtagctgggattacagctgcttgccaccacacccggctagtttttgtatttttagtagaaaacagggctttgccatgttggccaggctggcctcaaactcctgaccttattt--tccacccaccttagcctcccgaagtatt-gggattat-aggcgtgagccaccgcatccagcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63888938 297 - 106955855 aggcc-tttttttt---------tctgaga---tggagtttcacgcttgttgcccaggctgtagtgcagtggtgtgatctcggctcactgcagcctccgcctcctgggttcaagtaattctcctgcctcagcctcccgagtagctgggattacagccgcgtgccaccatacccagctaatttttgtatttttagtagagac-agggctttgccatgttggccaggctggcctcaaactcctgaccttattt--tccacccacctcagcctcccaaagtgtt-gggattac-aggcgtgagccaccgcacccagcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200656 301 + 53671032 AGGCC-ttttttttttttttttgtctgaga---cggagtttcactcttgtcgcccaggctgtagtgcagtggtgtgatctcggctcactgcagcctctgcctcccaggttcaagtaattctcctgcctcagcctcccgagtagctgggat--------cgtgccaccacacccagctaatttctgtatttttagtagagac-agggctttgccatgttggccaggctgttctcaaactcctgacctcaggtgatgtacccacctcagcctcccaaagtgct-gggattacaagacggggaccaccacacccagcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34654402 300 + 59248254 AGGCC-ttttttttttttttttgtctgaga---cggagtttcactcttgtcgcccaggctgtagtgcagtggtgtgatctcggctcactgcagcctctgcctcccaggttcaagtaattctcctgcctcagcctcccgagtagctgggat--------cgtgccaccacacccagctaatttctgtatttttagtagagac-agggctttgccatgttggccaggctggtctcaaactcctgacctcaggtgatgtacccacctcagcctcccaaagtgct-gggattac-agacgggagccaccacacccagcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4520988 302 - 13342542 AGGCCtttttttttttttttttgtctgagaccccggagtttcactcttgtcgcccaggctgtagtgcagtggt-tgatcttggctcactgcagcctctg-ctcctaggttcaagtaattctcctgcctcagcctcccgagtagctgggat--------catgccaccacacccagct-acttctgtatttttagtagagac-agggctttgccatgttggccaggctggtctcaaactcctgacctcaggtgatgtacccacctcagcctcccaaagtgctggggattac-agacgggagccaccacacccagcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5451448 304 + 7714307 AGGCC-ttttttttttttt----tctgaga---cggagtttcactcttgttgcccaggctgtagtgcagtggtgtgatctcggctcactgcagcctctgcctcccaggttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggcgcgtgccaccacacccagctaatttttgtatttttagtagagat-agggctttgccatgttggccaggctggtctcaaactcctgacctcaggtgatgtacccacctcagcctcccaaagtgct-gggattac-agacgggagccaccacacccagcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29263420 302 + 50890351 AGGCC-tttttttttt---t---tctgaga---cggagtttcactcttgttgcccaggctgtagtgcagtggtgtgatctcggctcactgcagcctctgcctcccaggttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggcgcgtgccaccacacccagctaatttttgtatttttagtagagac-agggctttgccatgttggccaggctggtctcaaactcctgacctcaggtgatgtacccacctcagcctcccaaagtgct-gggattac-agacgggagccaccacacccagcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 882596 305 - 2385121 AGGCC-ttttttttttttct---tctgaga---cggagtttcactcttgttgcccaggctgtagtgcagtggtgtgatctcggctcactgcagcctctgcctcccaggttcaagtaattttcctgcctcagcctcccgagtagctgggattacaggcgcgtgccaccacacccagctaatttttgtatttttagtagagac-agggctttgccgtgttagccaggctggtctcaaactcctgacctcaggtgatgtacccacctcagcctcccaaagtgct-gggattac-agacgggagccaccacacccagcc i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311033 82 + 643850 I e otoGar3.GL873654 5469351 1725 + 5549422 I e mm10.chr7 111084586 1016 - 145441459 I e canFam3.chr1 4605992 262 - 122678785 I e aotNan1.NW_018505377v1 354848 0 - 4471408 C e cebCap1.NW_016107633v1 1605935 20 - 2680843 I e saiBol1.JH378197 5396671 16 + 8899380 I e calJac3.chr22 28553253 0 + 49145316 C e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=1896343.000000 s hg38.chr19_GL383574v1_alt 64498 223 + 155864 AGGCAGTTATCTTTTAATATGTTCTTGAGTATTTCCTGCTAG-AAGGATTTGTTCGTTTATATTTA-CATTTTCCTATGGCTT-CTACTTTTGTGGT---TTT--TAT-GTTTTG----TGTCAGTTT-CAAGTTAGGATTATA-AAATTG-------GTTTTCATTGTTTTCTATG--CCTTTGGGAAT-GGAATTTTCTTC--ATG-TTACAAGTTTGAAACGTTTCCTCATTA-AAATTA----AGCCCAGAg s panTro5.chr19 36133111 223 + 61309027 AGGCAGTTATCTTTTAATATGTTCTTGAGTATTTCCTGCTAG-AAGGATTTGTTCGTTTATATTTA-CATTTTCCTATGGCTT-CTACTTTTGTGGT---TTT--TAT-GTTTTG----TGTCAGTTT-CAAGTTAGGATTATA-AAATTG-------GTTTTCATTGTTTTCTATG--CCTTTGGGAAT-GGAATTTTCTTC--ATG-TTACAAGTTTGAAACGTTTCCTTATTA-AAATTA----AGCCCAGAg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879240 223 + 64411610 AGGCAGTTATCTTTTAATATGTTCTTGAGTATTTCCTGCTAG-AAGGATTTGTTCGTTTATATTTA-CATTTTCCTATGGCTT-CTACTTTTGTGGT---TTT--TAT-GTTTTG----TGTCAGTTT-CAAGTTAGGATTATA-AAATTG-------GTTTTCATTGTTTTCTATG--CCTTTGGGAAT-GGAATTTTCTTC--ATG-TTACAAGTTTGAAACGTTTCCTTATTA-AAATTA----AGCCCAGAg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6296925 223 - 8369475 AGGCAGTTATCTTTTAATATGTTCTTGAGTATTTCCTGCTAG-AAGGATTTGTTCGTTTATATTTA-CATTTTCCTATGGCTT-CTACTTTTGTAGT---TCT--TAT-GTTTTG----TGTCAGTTT-CAAGTTAGGATTATA-AAATTG-------GTTTTCATTGTTTTCTATG--CCTTTGGGAAT-GGAATTTTCTTC--ATG-TTACAAGTTTGAAACGTTTCCTCATTA-AAATTA----AGCCCAGAg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889235 225 - 106955855 aggcagttatcttttaatatgttcttgagtatttcctgctagtagggatttgttcatttatatttatcattttcctatggctt-ctacttttgtagt---tct--tat-gttttg----tgtcagttt-caagttaggattata-aaattg-------gttttcattgttttctatg--cctttgggaat-ggaattttcttt--atg-ttacaagtttgaaacgcttcctcatta-aaatta----agcccagag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30200957 219 + 53671032 AGGCAGTTATCTTTTAATATGTTCTTGAGAT-TTCCTGCTAG-TAGGATT--GTCGTTTATATTTA-CA-TTTCCTATGACTTGCTACTTTTGTGGT---TC---------TTTT----TGTCAGTTT-CATGTTAGGATTATATAAATCG-------CGTTTCATTGTTTTCTATTGCCTTTTGGGAATGGGAATTATCTTT--ATGTTTACAAG-TTGAAACGTTTCCTCATTATAAATTA----AGTCCAGAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34654702 223 + 59248254 AGGCAGTTATCTTTTAATATGTTCTTGAGTATTTCCTGCTAG-TAGGATTTGTTCATTTATATTTA-CATTTTCCTATGACTT-CTACTTTTGTGGT---TCT--TAT-GTTTTG----TGTCAGTTT-CATGTTAGGATTATA-AAATCG-------GTTTTCATTGTTTTCTATG--CCTTTGGGAAT-GGAATTATCTTT--ATG-TTACAAGTTTGAAACGTTTCCTCATTA-AAATTA----AGTCCAGAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4521290 223 - 13342542 AGGC-GTTATCTTTTAATATGTTC-TGAGTA-TTCCTGCTAG-TAGGATTTGTTCGTTTATATTTA-CATTTTCCTATGACTT-CTACTTTTGTGGT---TCT--TAT-GTTTTG----TGTCAGTTTCCATGTTAGGATTATA-AAATCG-------GTTTTCATTGTTTTCTATG--CCTTTGGGAAT-GGAATTATCTTTTAATG-TTACAAGTTTGAAACGTTTCCTCATTA-AAATTA----AGTCCAGAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5451752 223 + 7714307 AGACAGTTATCTTTTAATATGTTCTTGAGTATTTCCTGCTAG-TAGGATTTGTTCGTTTATATTTA-CATTTTTCTATGACTT-CTACTTTTGTGGT---TCT--TAT-GTTTTG----TGTCAGTTT-CATGTTAGGATTATA-AAATCG-------GTTTTCATTGTTTTCTGTG--CCTTTGGGAAT-GGAATTATCTTT--ATG-TTACAAGTTTGAAACGTTTCCTCATTA-AAATTA----AGTCCAGAg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29263722 223 + 50890351 AGGCAGTTATCTTTTAATATGTTCTTGAGTATTTCCTGCTAG-TAGGATTTGTTCGTTTATATTTA-CATTTTCCTATGACTT-CTACTTTTGTGGT---TCT--TAT-GTTTTG----TGTCAGTTT-CATGTTAGGATTATA-AAATTG-------GTTTTCATTGTTTTCTATG--CCTTTGGGAAT-GGAATTATCTTT--ATG-TTACAAGTTTGAAACGTTTCCTCATTA-AAATTA----AGTCCAGAg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 882901 223 - 2385121 AGGCAGTTATCTTTTAATATGTTCTTGAGTATTTCCTGCTAG-TAGGATTTGTTCATTTATATTTA-CATTTTCCTATGACTT-CTACTTTTGTGGT---TCT--TAT-GTTTTG----TGTCAGTTT-CATGTTAGGATTATA-AAATCG-------GTTTTCATTGTTTTCTATG--CCTTTGGGAAT-GGAATTATCTTT--ATG-TTACAAGTTTGAAACGTTTCCTCATTA-AAATTA----AGTCCAGAg i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553253 219 + 49145316 AGGCAGTTATCTTTTAATACATTCTTGAGTATTTCCTGCTAG-TAGGATTTCTTCGTTTATATTTA-CATTG---------TT-CTACTTTTGTGGT---TCTTATAT-GTTTTG----TGTCAGTTT-CATGTTAGGATTATA-AAATTGATT----GTTTTCATTGTTTTCTGTG--CTTTGGGGAAT-GAAATTATCTAT--ATG-TTACAAATTTGAAATGCTTTCTCATTA-AAATTA----AGCCCAGAg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5396687 217 + 8899380 AGGCAGTTATCTTTTACTACATTCTTGAGTATTTCCTGCTAG-TAGGATTTCTCTGTTTATATTTA-CATTG---------TT-CTACTTTTGTGGT---TCT--TAT-GTTTTG----TGTCAGTTT-CATGTTAGGGTTATA-AAATTGATT----GTTTCCATTGTTTTCTATG--CTTTGGGGAAT-GGAATTATCTAT--ATG-TTACAAATTTGAAATATTTTCTCATTA-AAATTA----AGCCCAGAG i saiBol1.JH378197 I 16 C 0 s cebCap1.NW_016107633v1 1605955 217 - 2680843 AGGCAGTTATCTTTTAATACATTCTTGAGTATTTCCTGTTAG-TAGGGTTTCTTCATTTATATTTA-CATTG---------TT-CTACTTTTGTGGT---TCT--TAT-GTTTTG----TGTCAGTTT-CATGTTAGGGTTATA-AAATTGATT----GTTTTCATTGTTTTCTGTG--CTCTGGGGAAT-GGAATTATCTAT--ATG-TTACAAATTTGAAATGTTTTCTCATTA-AAATTA----AGCCCAGAg i cebCap1.NW_016107633v1 I 20 C 0 s aotNan1.NW_018505377v1 354848 217 - 4471408 AGGCAGTTATCTTTTAATACATTCTTGAGTATTTCTTGCTAG-TAGGATTTCTTCGTTTATATTTA-CATTG---------TT-CTACTTTTGTGGT---TCT--TAT-GTTTTG----TGTCAGTTT-CATGTTAGGGTTATA-AAATTGATT----GTTTTCATTGTTTTCTGTG--CTTTGGGGAAT-GGAATGATCTAT--ATG-TTACAAATTTGAAATGTTTTCTCATTA-AAATTA----AGCCCAGAg i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 311115 241 + 643850 agacaattgtcttttaatatattcttgaattttacctgctag-taggatttatgcatttctactta-cattgctttatggctc-ctacttttgtattgtcttt--tacaattttggggttatcatttt-catcttagcattata-aaattacttgATATTTTTCATTATCTTATATG--CTTTTAAGAAT-GGAATTACCGTT--ACC-TTA-AAATTTGAAATGCTTTCTCACTA-AAATTATTTGATCCTAGAG i dasNov3.JH563638 I 82 I 1 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e otoGar3.GL873654 5469351 1725 + 5549422 I e mm10.chr7 111084586 1016 - 145441459 I e canFam3.chr1 4605992 262 - 122678785 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=533919.000000 s hg38.chr19_GL383574v1_alt 64721 74 + 155864 gccaggcacggtgg--ctcacacctg--taatctc-agcactttgggacgc--cgaggcggg-caggtcacgaggtcaggag s panTro5.chr19 36133334 74 + 61309027 gccaggcacggtgg--ctcacacttg--taatctg-agcactttgggacgc--cgaggcggg-caggtcacgaggtcaggag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879463 74 + 64411610 gccaggcacggtgg--ctcacacttg--taatctc-agcactttgggacgc--cgaggcggg-caggtcacgaggtcaggag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297148 74 - 8369475 gccaggcacggtgg--ctcacacctg--taatctc-agcactttgggacgc--cgaggcggg-cagatcacgaggtcaggag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889460 74 - 106955855 gccaggcacggtgg--ctcacacctg--taatctc-agcactttgggacgc--cgaggcagg-cagataacgaggtcaggag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30201176 78 + 53671032 G-CAGG-Acggtggctctcacacctgtataatctctagcactttgagatgctgtgaggcggg-cagatcacgaggtca-gag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34654925 73 + 59248254 G-caggcacggtgg--ctcacacctg--taatctc-agcactttgagatgc--tgaggcggg-cagatcacgaggtcaggag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4521513 74 - 13342542 G-caggcacggtgg--ctcacacctg--taatctc-agcactttgagatgc--tgaggcgggccagatcacaaggtcaggag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5451975 74 + 7714307 gccaggcacggtgg--ctcacacctg--taatctc-agcactttgagaggc--tgaggcggg-cagatcacgaggtcaggag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29263945 74 + 50890351 gccaggcacggtgg--ctcacacctg--taatctc-agcactttgagaggc--tgaggcggg-cagatcacaaggtcaggag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883124 74 - 2385121 gccaggcacggtgg--ctcacacctg--taatctc-agcactttgagaggc--tgaggcggg-cagatcatgaggtcaggag i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553472 73 + 49145316 gctgggtgtggtgt--ctcaggcctg--taatccc-agcactttgggaggc---aaggcggg-tgtatcataaggtcaggag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5396904 74 + 8899380 Cctgggtgtggtgt--ctcaggcctg--taatccc-agcactttgggaggc--tcaggtggg-tggatcacgaggtcagaag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606172 74 - 2680843 gctgggtgtggtgt--ctcaggccta--taatccc-agcactttgggaggc--tcaggtggg-tggatcacgaggtcaggag i cebCap1.NW_016107633v1 C 0 I 42 s aotNan1.NW_018505377v1 355065 74 - 4471408 gctgggtgtggtgt--ctcaggcctg--taattcc-agcactttgggaggc--tcaggcggg-tggatcacgaggtcaggag i aotNan1.NW_018505377v1 C 0 I 45 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311356 1 + 643850 I e otoGar3.GL873654 5469351 1725 + 5549422 I e mm10.chr7 111084586 1016 - 145441459 I e canFam3.chr1 4605992 262 - 122678785 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=215260.000000 s hg38.chr19_GL383574v1_alt 64795 41 + 155864 tttgagatcagcctggcc-atacggtgaaaccctgtctctac s panTro5.chr19 36133408 41 + 61309027 tttgagaccagcctggcc-atacggtgaaaccctgtctctac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879537 41 + 64411610 tttgagaccagcctggcc-atacggtgaaaccctgtctctac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297222 41 - 8369475 tttgagaccagcctggcc-atacggtgaaaccctgtctctac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889534 41 - 106955855 tttgagaccagcctggcc-atatggtgaaaccctgtctctac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30201254 39 + 53671032 tttgagaccagcctggcc-atattggtgaaac--gtctctac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34654998 39 + 59248254 tttgataccagcctggcc-atatagtgaaacc--gtctctac i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4521587 39 - 13342542 tttgagaccagcctggcc-atatggtgaaacc--gtctctac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452049 39 + 7714307 tttgagaccagcctggcc-atatggtgaaatc--atctctac i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264019 39 + 50890351 tttgagaccagcctggcc-atatggtgaaacc--gtctctac i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883198 39 - 2385121 tttgagaccagcctggcc-atatggtgaaacc--gtctctac i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553545 42 + 49145316 atcaagaccatcctgcccaacatggtgaaacctcatctctac i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5396978 42 + 8899380 ttggagaccgtcctgccccacatggtgaaaccccatctctac i saiBol1.JH378197 C 0 I 1 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311356 1 + 643850 I e otoGar3.GL873654 5469351 1725 + 5549422 I e mm10.chr7 111084586 1016 - 145441459 I e canFam3.chr1 4605992 262 - 122678785 I e aotNan1.NW_018505377v1 355139 45 - 4471408 I e cebCap1.NW_016107633v1 1606246 42 - 2680843 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=736959.000000 s hg38.chr19_GL383574v1_alt 64836 181 + 155864 taaaaat-agaaaaattagc-tgggtgtggtggcacacgcct-gtagtcccagctgctcgggaggctgaggcaggagaatcacttgaacccgggaggcga-ggttgtagtgagccaagatcgtaccactgcactccagcctgggcaacagagcgagagtctgtc------------aaaaaaaaaaaaaaaaaaaaa----- s panTro5.chr19 36133449 176 + 61309027 taaaaat-agaaaaattagc-tgggtgtggtggcacacgcct-gtagtcccagctgctcgggaggctgaggcaggagaatcacttgaacccgggaggcga-ggttgtagtgagccaagatcgcaccactgcactccagcctgggcaacagagcaagagtctgtc-----------------aaaaaaaaaaaaaaaa----- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879578 174 + 64411610 taaaaat-agaaaaattagc-tgggtgtggtggcacacgcct-gtagtcccagctgctcgggaggctgaggcaggagaatcacttgaacccgggaggcga-ggttgtagtgagccaagatcgcaccactgcactccagcctgggcaacagagcgagagtctgtc-------------------aaaaaaaaaaaaaa----- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297263 175 - 8369475 t-aaaat-agaaaaattagc-tgggtgtggtggcacacgcct-gtagtcccagctgctcgggaggctgaggcaggagaatcacttgaacccgggaggtga-ggttgtagtgagccaagatcgcaccactgcactccagcctgggcaacagagcgagagtctgtc-----------------aaaaaaaaaaaaaaaa----- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889575 180 - 106955855 taaaaat-agaaaaattagc-tgggtgtggtggcacacgcct-gtaggcccagctgctcgggaggctgaggcaggagaatcacttgaacctgggaggcaa-agttgtagtgagccaagattgcaccactgcactccagcctgggcaacagagcgagagtccgtc-------------aaaaataaaaaataaaaaaa----- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30201293 184 + 53671032 taaaaataagaaaaattagctggggcttgatggcgcacgcctggtagtcccagctgcttgggaggctcaggcaggagaatcacttgaacccaggaggtgagggttgtagtgagccaagatcgtgccactgcactccagcct-ggtgacagagtgagacgccgtc-----------------aaaaaaaaaaaaaaaaaaaaa i rheMac8.chr19 C 0 I 343 s macFas5.chr19 34655037 176 + 59248254 taaaaat-agaaaaattagc-tgggcttgatggcgcacgcct-gttgtcccagctgcttgggaggcttaggcaggagaatcacttgaacccaggaggtga-ggttgtagtgagccaagatcgtgccactgcactccagcctgggtgacagagcgagactccgtc-----------------aaaaaaaaaaaaaaaG----- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4521626 179 - 13342542 taaaaat-agaaaaattagcgtgggcttgatggcgcacgcct-gtagtcccagctgcttgggaggctcaggcaggagaatcacttgaacccaggaggtga-ggttgtagtgagccaagatcgcgccactgcactccagcctaggtgacagagcgagactccaaa-----------------aaaaaaaaaaaaaaaaaa--- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452088 172 + 7714307 taaaaat-agaaaaattagc-tgggcttgatggtgcacgcct-gtagtcccagctgcttgggaggctgaggcaggagaatcacttgaacccaggaggtga-cgttgtagtgagccaagatcgtgccactgcactccagcctgggtgacagagcgagactccgtc-----------------aaaaaaaaaaaa--------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264058 189 + 50890351 taaaaat-agaaaaattagc-tgggcttgatggtgcacacct-gtagtcccagctgcttgggaggctgaggcaggagaatcacttgaacccaggaggtga-ggttgtagtgagccaagatcgtgccactgcactccagcctgggcaacaggggcaaaatcctgcaacaaaaaaaaaaaaaaaaaaaaaaaaaa--------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883237 172 - 2385121 taaaaat-agaaaaattagc-tgggcttgatggcgcacgcct-gtagtcccagctgcttgggaggctgaggcaggagaatcacttgaacccaggaggtga-ggttgtagtgagccaagatcgtgccactgcactccagcctgggtgacagagtgagactccgtc-----------------aaaaaaaaaaaa--------- i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311356 1 + 643850 I e otoGar3.GL873654 5469351 1725 + 5549422 I e mm10.chr7 111084586 1016 - 145441459 I e canFam3.chr1 4605992 262 - 122678785 I e aotNan1.NW_018505377v1 355139 45 - 4471408 I e cebCap1.NW_016107633v1 1606246 42 - 2680843 I e saiBol1.JH378197 5397020 1 + 8899380 I e calJac3.chr22 28553587 1 + 49145316 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=25767.000000 s hg38.chr19_GL383574v1_alt 65017 7 + 155864 TTGAGCC s panTro5.chr19 36133625 7 + 61309027 TTAAGCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879752 7 + 64411610 TTAAGCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297438 7 - 8369475 TTAAGCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889755 7 - 106955855 ttaagac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34655213 6 + 59248254 -TAAGCC i macFas5.chr19 C 0 I 317 s macNem1.NW_012011689v1 4521805 7 - 13342542 TTAAGCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452260 7 + 7714307 TTAAGCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264247 7 + 50890351 TTAAGCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883409 7 - 2385121 TTAAGCC i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311356 1 + 643850 I e otoGar3.GL873654 5469351 1725 + 5549422 I e mm10.chr7 111084586 1016 - 145441459 I e canFam3.chr1 4605992 262 - 122678785 I e aotNan1.NW_018505377v1 355139 45 - 4471408 I e cebCap1.NW_016107633v1 1606246 42 - 2680843 I e saiBol1.JH378197 5397020 1 + 8899380 I e calJac3.chr22 28553587 1 + 49145316 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e rheMac8.chr19 30201477 343 + 53671032 I a score=45470.000000 s hg38.chr19_GL383574v1_alt 65024 9 + 155864 CAGATCCTG s panTro5.chr19 36133632 9 + 61309027 CAGATCCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879759 9 + 64411610 CAGATCCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297445 9 - 8369475 CAGATCCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889762 9 - 106955855 cagctcctg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30201820 9 + 53671032 CAGATCCTG i rheMac8.chr19 I 343 C 0 s macFas5.chr19 34655536 9 + 59248254 CAGATCCTG i macFas5.chr19 I 317 C 0 s macNem1.NW_012011689v1 4521812 9 - 13342542 CAGATCCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452267 9 + 7714307 CAGATCCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264254 9 + 50890351 CAGATCCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883416 9 - 2385121 CAGATCCTG i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311356 1 + 643850 I e otoGar3.GL873654 5469351 1725 + 5549422 I e mm10.chr7 111084586 1016 - 145441459 I e canFam3.chr1 4605992 262 - 122678785 I e aotNan1.NW_018505377v1 355139 45 - 4471408 I e cebCap1.NW_016107633v1 1606246 42 - 2680843 I e saiBol1.JH378197 5397020 1 + 8899380 I e calJac3.chr22 28553587 1 + 49145316 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=52173.000000 s hg38.chr19_GL383574v1_alt 65033 9 + 155864 TTTTTGAAT s panTro5.chr19 36133641 9 + 61309027 TTTTTGAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879768 9 + 64411610 TTTTTGAAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297454 9 - 8369475 TTTTTGAAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889771 9 - 106955855 tttttgaat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30201829 9 + 53671032 TTTTTGAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34655545 9 + 59248254 TTTTTGAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4521821 9 - 13342542 TTTTTGAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452276 9 + 7714307 TTTTTGAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264263 9 + 50890351 TTTTTGAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883425 9 - 2385121 TTTTTGAAT i manLeu1.NW_012102454v1 C 0 C 0 s canFam3.chr1 4606254 9 - 122678785 tttttcaat i canFam3.chr1 I 262 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311356 1 + 643850 I e otoGar3.GL873654 5469351 1725 + 5549422 I e mm10.chr7 111084586 1016 - 145441459 I e aotNan1.NW_018505377v1 355139 45 - 4471408 I e cebCap1.NW_016107633v1 1606246 42 - 2680843 I e saiBol1.JH378197 5397020 1 + 8899380 I e calJac3.chr22 28553587 1 + 49145316 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=28136.000000 s hg38.chr19_GL383574v1_alt 65042 12 + 155864 CAGTTGTTTAAG s panTro5.chr19 36133650 12 + 61309027 CAGTTGTTTAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879777 12 + 64411610 CAGTTGTTTAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297463 12 - 8369475 CAGTTGTTTAAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889780 12 - 106955855 cagttgtttaag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30201838 8 + 53671032 CAG----TTAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34655554 8 + 59248254 CAC----TTAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4521830 8 - 13342542 CAG----TTAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452285 8 + 7714307 CAG----TTAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264272 8 + 50890351 CAG----TTAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883434 8 - 2385121 CAG----TTAAG i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5471076 12 + 5549422 cacTTGCCATAA i otoGar3.GL873654 I 1725 C 0 s canFam3.chr1 4606263 11 - 122678785 -agttgttcaag i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311356 1 + 643850 I e mm10.chr7 111084586 1016 - 145441459 I e aotNan1.NW_018505377v1 355139 45 - 4471408 I e cebCap1.NW_016107633v1 1606246 42 - 2680843 I e saiBol1.JH378197 5397020 1 + 8899380 I e calJac3.chr22 28553587 1 + 49145316 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=81612.000000 s hg38.chr19_GL383574v1_alt 65054 20 + 155864 AGC-TGTAGTTTTCTTTTAT---G s panTro5.chr19 36133662 20 + 61309027 AGC-TGTAGTTTTCTTTTAT---G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879789 20 + 64411610 AGC-TGTAGTTTTCTTTTAT---G i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297475 20 - 8369475 AGC-TGTAGTTTTCTTTTAT---G i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889792 20 - 106955855 agc-tgtagttttcttttat---g i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30201846 20 + 53671032 AGC-TATAATTTTCTTTTATG--- i rheMac8.chr19 C 0 I 26 s macFas5.chr19 34655562 19 + 59248254 AGC-TATAATTTTCTTTTAT---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4521838 19 - 13342542 AGC-TATAATTTTCTTTTAT---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452293 20 + 7714307 AGC-TATAATTTTCTTTTAT-G-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264280 20 + 50890351 AGC-TATAATTTTCTTTCAT--G- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883442 20 - 2385121 AGC-TATAATTTTCTTTAAT--G- i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5471088 20 + 5549422 AAC-TTTAATTTTCTTTTGT---G i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4606274 21 - 122678785 aacttttaactgccttttat---g i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 311357 20 + 643850 AAC-TCTAATTTTCTTTCAT---G i dasNov3.JH563638 I 1 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e mm10.chr7 111084586 1016 - 145441459 I e aotNan1.NW_018505377v1 355139 45 - 4471408 I e cebCap1.NW_016107633v1 1606246 42 - 2680843 I e saiBol1.JH378197 5397020 1 + 8899380 I e calJac3.chr22 28553587 1 + 49145316 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=121052.000000 s hg38.chr19_GL383574v1_alt 65074 31 + 155864 ATTATTGATTTAATAAGGTTTTATATTTTCT s panTro5.chr19 36133682 31 + 61309027 ATTATTGATTTAATAAGGTTTTATATTTTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879809 31 + 64411610 ATTATTGATTTAATAAGGTTTTATATTTTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297495 31 - 8369475 ATTATTGATTTAATAAGGTTTCATATTTTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889812 31 - 106955855 attattgatttaataaggttttatattttct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34655581 11 + 59248254 ----------------GGTTTTGTAT----T i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4521857 11 - 13342542 ----------------GGTTTTGTAT----T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452313 31 + 7714307 ATTATTGATTTAATAAGGTTTTGTATTTTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264300 31 + 50890351 ATTATTGATTTAATAAGGTTTTGTATTTTCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883462 31 - 2385121 ATTATTGATTTAATAAGGTTTTGTATTTTCT i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5471108 31 + 5549422 ATTATTGATTTAATGAAGTTTTCCATCTTCC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4606295 29 - 122678785 attattgagttaataagattgtacacttt-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 311377 31 + 643850 ATTACTGGTTTAATAAGGTTTTATGCTTTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e mm10.chr7 111084586 1016 - 145441459 I e aotNan1.NW_018505377v1 355139 45 - 4471408 I e cebCap1.NW_016107633v1 1606246 42 - 2680843 I e saiBol1.JH378197 5397020 1 + 8899380 I e calJac3.chr22 28553587 1 + 49145316 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e rheMac8.chr19 30201866 26 + 53671032 I a score=7098.000000 s hg38.chr19_GL383574v1_alt 65105 1 + 155864 T s panTro5.chr19 36133713 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879840 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297526 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889843 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34655592 1 + 59248254 T i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4521868 1 - 13342542 T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452344 1 + 7714307 T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264331 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883493 1 - 2385121 T i manLeu1.NW_012102454v1 C 0 C 0 s cebCap1.NW_016107633v1 1606288 1 - 2680843 t i cebCap1.NW_016107633v1 I 42 C 0 s otoGar3.GL873654 5471139 1 + 5549422 T i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 311408 1 + 643850 T i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e mm10.chr7 111084586 1016 - 145441459 I e canFam3.chr1 4606324 0 - 122678785 C e aotNan1.NW_018505377v1 355139 45 - 4471408 I e saiBol1.JH378197 5397020 1 + 8899380 I e calJac3.chr22 28553587 1 + 49145316 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e rheMac8.chr19 30201866 26 + 53671032 I a score=19110.000000 s hg38.chr19_GL383574v1_alt 65106 2 + 155864 TA s panTro5.chr19 36133714 2 + 61309027 TA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879841 2 + 64411610 TA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297527 2 - 8369475 TA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889844 2 - 106955855 ta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34655593 2 + 59248254 TA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4521869 2 - 13342542 TA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452345 2 + 7714307 TA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264332 2 + 50890351 TA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883494 2 - 2385121 TA i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553588 2 + 49145316 TA i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5397021 2 + 8899380 TA i saiBol1.JH378197 I 1 C 0 s cebCap1.NW_016107633v1 1606289 2 - 2680843 TA i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5471140 2 + 5549422 TA i otoGar3.GL873654 C 0 I 16 s dasNov3.JH563638 311409 2 + 643850 TA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e mm10.chr7 111084586 1016 - 145441459 I e canFam3.chr1 4606324 0 - 122678785 C e aotNan1.NW_018505377v1 355139 45 - 4471408 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e rheMac8.chr19 30201866 26 + 53671032 I a score=78701.000000 s hg38.chr19_GL383574v1_alt 65108 18 + 155864 --TCTGTTTTGTAAT-----------------ATATA s panTro5.chr19 36133716 18 + 61309027 --TCTGTTTTGTAAT-----------------ATATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879843 18 + 64411610 --TCTGTTTTGTAAT-----------------ATATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297529 18 - 8369475 --TCTGTTTTGTAAT-----------------ATATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889846 18 - 106955855 --tctgttttgtaat-----------------atata i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34655595 13 + 59248254 --TCTGTTTTGTGAT---------------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4521871 13 - 13342542 --TCTGTTTTGTGAT---------------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452347 14 + 7714307 --TCTGTTTTGTGATA--------------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264334 13 + 50890351 --TCTGTTTTGTGAT---------------------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883496 13 - 2385121 --TCTGTTTTGTGAT---------------------- i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553590 18 + 49145316 --TCTGTTTTGTAAT-----------------ATATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397023 18 + 8899380 --TCTGTTTTGTAAT-----------------ATATA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606291 18 - 2680843 --TCTGTTTTATAAT-----------------ATATA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 355184 18 - 4471408 --TCTGTTTTGTAAT-----------------ATATA i aotNan1.NW_018505377v1 I 45 C 0 s otoGar3.GL873654 5471158 35 + 5549422 --TTTGTTTTGTGGTTTTTGgccacctctggtatata i otoGar3.GL873654 I 16 I 62 s canFam3.chr1 4606324 11 - 122678785 -----gttttgtaat-----------------a---- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 311411 13 + 643850 TCTTTGATTTACT------------------------ i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e mm10.chr7 111084586 1016 - 145441459 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e rheMac8.chr19 30201866 26 + 53671032 I a score=603978.000000 s hg38.chr19_GL383574v1_alt 65126 62 + 155864 ACAT---TCTAAAATCATTCATTTTATTAATATTTTCAAA-TTTATTAATGGAAAATAAATTATAA s panTro5.chr19 36133734 62 + 61309027 ACAT---TCTAAAATCATTCATTTTATTAATATTTTCAAA-TTTATTAATGGAAAATAAATTATAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879861 62 + 64411610 ACAT---TCTAAAATCATTCATTTTATTAATATTTTCAAA-TTTATTAATGGAAAATAAATTATAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297547 62 - 8369475 ACAT---TCTAAAATCATTCATTTTATTAATATTTTCAAA-TTTATTAATGGAAAATAAATTATAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889864 62 - 106955855 acat---tctaaaatcattcattttattaatattttcaaa-tttattaatggaaaataaattataa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30201892 62 + 53671032 ACAT---TCCAAAATCATTCATTTTATTAATATTTTCAAA-TTTATTAATGGAAAATGAATTATAA i rheMac8.chr19 I 26 C 0 s macFas5.chr19 34655608 62 + 59248254 ACAT---TCCAAAATCATTCATTTTATTAATATTTTCAAA-TTTATTAATGGAAAATGAATTATAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4521884 62 - 13342542 ACAT---TCCAAAATCATTCATTTTATTAATATTTTCAAA-TTTATTAATGGAAAATGAATTATAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452361 61 + 7714307 -CGT---TCCAAAATCATTCATTTTATTAATATTTTCAAA-TTTATTAATGGAAAATAAATTATAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264347 62 + 50890351 ACAT---TCCAAAATCATTCATTTTATTAATATTTTCAAA-TTTATTAATGGAAAATAAATTATAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883509 62 - 2385121 ACGT---CCCAAAATCATTCATTTTATTAATATTTTCAAA-TTTATTAATGGAAAATAAATTATAA i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553608 57 + 49145316 ACAT---TCCCaaat-----attttattaatattttcaaa-tttattaatGGAAAATAAATCGTAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397041 57 + 8899380 ACAT---TCCCaaat-----attttattaatattttcaaa-tttattaatggaaaataaattgtaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606309 57 - 2680843 ACAT---TCCCAAAT-----ATTTTATTAATATTTTCAAA-TCTATTAATGGAAAATAAATTGTAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 355202 57 - 4471408 ACAT---TCCCAAAT-----ATTTTATTAATATTTTCAAA-TTTATTAATGGAAAATAAATTGTAA i aotNan1.NW_018505377v1 C 0 I 6 s otoGar3.GL873654 5471255 57 + 5549422 TTAT---TCCCAAATCATCTGTTTT-TTCATGTTTTCAAATTTTATTATTGGAGAATA-----TAA i otoGar3.GL873654 I 62 C 0 s canFam3.chr1 4606335 60 - 122678785 acatttatcccgattcatttattttattaatactttcaaa-taaatca--ggaaaa---attatAA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 311424 54 + 643850 ---------CACAATTATCCATTTCAGTAATATTTTCAG--TTTATTACTGGAGAATAAATTATA- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e mm10.chr7 111084586 1016 - 145441459 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=288907.000000 s hg38.chr19_GL383574v1_alt 65188 40 + 155864 TTTTACAACTCTTCTAAATT--AAA----AAGGGAATGTATAATCT s panTro5.chr19 36133796 40 + 61309027 TTTTACAACTCTTCTAAATT--AAA----AAGGGAATGTATAATCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879923 40 + 64411610 TTTTACAACTCTTCTAAATT--AAA----AAGGGAATGTATAATCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297609 40 - 8369475 TTTTACAACTCTTCTAAATT--AAA----AAGGGAATGTATAATCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889926 40 - 106955855 tTTTACAACTCTTCTAAATT--AAA----AAGGGAATGTATAATCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30201954 40 + 53671032 TTTTACAGCTCTTCTAAATT--GAA----AAGGCAGTGTATAATCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34655670 40 + 59248254 TTTTACAGCTCTTCTAAATT--GAA----AAGGCAGTGTATAATCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4521946 40 - 13342542 TTTTACAGCTCTTCTAAATT--GAA----AAGGCAGTGTATAATCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452422 40 + 7714307 TTTTACAGCTCTTCTAAATT--GAA----AAGGCAGTGTATAATCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264409 40 + 50890351 TTTTACAGCTCTTCTAAATT--GAA----AAGGCAGTGTATAATCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883571 40 - 2385121 TTTTACAGCTCTTCTAAATT--GAA----AAGGCAGTGTATAATCT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553665 39 + 49145316 TTTTAAAACTCTTCCAAATT--AAA----AAGATAGTATATAATC- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397098 39 + 8899380 tttaaaaaCTCTTCCAAATT--AAA----AAGACAGTATATAATC- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606366 38 - 2680843 TTTTAAAACTCTTCCAAATT--AAA----AAGACGG-ATATAATC- i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5471312 41 + 5549422 -TTTAAAA--CTTCCAAATT--TAAAAATAAAGTAATGTCTAATCA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4606395 40 - 122678785 TTTTGGA---TGTCCAAGTA--AAAAATAAAGGTAAAGCATAATC- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 311478 38 + 643850 ----AAAACGCTTTCAAATTTAAAA----AAAGAAAGGTATTATGT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 567400 1482 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e mm10.chr7 111084586 1016 - 145441459 I e aotNan1.NW_018505377v1 355259 6 - 4471408 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=471321.000000 s hg38.chr19_GL383574v1_alt 65228 46 + 155864 ----ACCTT--ATTTAGAAAATGATTGAAAAATGATCTTTCACTTAATTTTA s panTro5.chr19 36133836 46 + 61309027 ----ACCTT--ATTTAGAAAATGATTGAAAAATGATCTTTCGCTTAATTTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39879963 46 + 64411610 ----ACCTT--ATTTAGAAAATGATTGAAAAATGATCTTTCGCTTAATTTta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297649 46 - 8369475 ----ACCTT--ATTTAGAAAATGATTGAAAAATGATCTTTCACTTAATTTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63889966 46 - 106955855 ----ACCTT--ATTTAGAAAACAATTGAAAAATGATCTTCCACTTAATTTTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30201994 41 + 53671032 ----ACCTT--ATTTAGAAGATGATTGAAAAATAATCTTTCG-----TTTTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34655710 41 + 59248254 ----ACCTT--ATTTAGAAGATGATTGAAAAATAATCTTTCG-----TTTTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4521986 41 - 13342542 ----ACCTT--ATTTAGAAGATGATTGAAAAATAATCTTTCG-----TTTTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452462 41 + 7714307 ----ACCTT--ATTTAGAAAATGATTGAAAAATAATCTTTCG-----TTTTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264449 41 + 50890351 ----ACCTT--ATTTAGAAAATGATTGAAAAATAATCTTTCG-----TTTTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883611 41 - 2385121 ----ACCTT--ATTTAGAAAATGATTGAAAAATAATCTTTCG-----TTTTA i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553704 46 + 49145316 ----ACCTT--ATTTAGAAAATGATTGAAAAATGATCTTTCATTTAATTTTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397137 44 + 8899380 ----ACCTT--ATTTAGAAAGTGATTGAAAAATGA--TTTCATTTAATTTTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606404 46 - 2680843 ----GCCTT--ATTTAGAAAGTGATTGAAAAATGACCTTTCATTTAATTTTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 355265 46 - 4471408 ----ACCTT--ATTTAGAAAATGATTGAAAAATGATCTTTCATTTAATTTTA i aotNan1.NW_018505377v1 I 6 C 0 s proCoq1.NW_012149263v1 568882 46 + 2501019 ----ACCTT--ATTTAGACAATGATTGGAAAGCCATCTTTCACTTAATTTTA i proCoq1.NW_012149263v1 I 1482 I 533 s otoGar3.GL873654 5471353 46 + 5549422 ----CCTTA--ATTTAGATAATGATTGCAAAGTCATCTTTTACTTAATTTTA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4606435 41 - 122678785 ----ACCTT--ATTTAGATAATAATTAGAAAGTGATCTTTAA-----TTTCA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 311516 51 + 643850 AATCGCCTTGAACTTAGGCTATCATTAGAAAGTGATCATTCATTTAATTTA- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3950787 1018 - 30143674 I e mm10.chr7 111084586 1016 - 145441459 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=101649.000000 s hg38.chr19_GL383574v1_alt 65274 12 + 155864 GAAatctagata s panTro5.chr19 36133882 12 + 61309027 TAAACCTAGATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880009 12 + 64411610 taaacctagata i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297695 12 - 8369475 GAAACCtagata i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890012 12 - 106955855 GAAACCtagata i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202035 12 + 53671032 GAAACCtagata i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34655751 12 + 59248254 GAAACCtagata i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522027 10 - 13342542 GAAACCTAGA-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452503 12 + 7714307 GAAACCtagata i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264490 9 + 50890351 GAAACCTAG--- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883652 12 - 2385121 GAAACCtagata i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553750 12 + 49145316 GAAACCTAGATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397181 12 + 8899380 GAAACCTAGATA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606450 12 - 2680843 GAAACCTAGATA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 355311 12 - 4471408 GAAATCTAGATA i aotNan1.NW_018505377v1 C 0 I 68 s otoGar3.GL873654 5471399 12 + 5549422 GAAAACTAGGAA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4606476 4 - 122678785 GAAA-------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 311567 12 + 643850 GGAAGCTAGATG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 568928 533 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e mm10.chr7 111084586 1016 - 145441459 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=99330.000000 s hg38.chr19_GL383574v1_alt 65286 25 + 155864 tgata----------tttttagatg----tatatgtact s panTro5.chr19 36133894 25 + 61309027 TGATA----------TTTTTAGATG----TATATGTACT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880021 25 + 64411610 tgata----------tttttagatg----tatatgtact i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297707 25 - 8369475 tgata----------tttttagatg----tatatgtact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890024 25 - 106955855 tgata----------tttttagatg----tatatatact i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202047 25 + 53671032 tgata----------tttttagatg----tatatgtact i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34655763 25 + 59248254 tgata----------tttttagatg----tatatgtact i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5452515 25 + 7714307 tgata----------tttttagatg----tatatgtact i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 883664 25 - 2385121 tgata----------tttttagatg----tatatgtact i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553762 23 + 49145316 ---TAT---------TTTTTGGATG----TATAAATACT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397193 23 + 8899380 ---TAT---------TTTTTAGATG----TATAAATACT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606462 23 - 2680843 ---TAT---------TTTTTAGATG----TATAAATACT i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5471411 9 + 5549422 ---------------AGTTTGGAt--------------- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4606480 14 - 122678785 ---------------------AATG----TATACTGAAT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 311579 39 + 643850 TAATTCTCTAGTGAGTTTTTATATAATTTTATATGTGCT i dasNov3.JH563638 C 0 I 14 e proCoq1.NW_012149263v1 568928 533 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e mm10.chr7 111084586 1016 - 145441459 I e chlSab2.chr6 29264499 0 + 50890351 C e aotNan1.NW_018505377v1 355323 68 - 4471408 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e macNem1.NW_012011689v1 4522037 0 - 13342542 C a score=9830.000000 s hg38.chr19_GL383574v1_alt 65311 3 + 155864 c-----tt s panTro5.chr19 36133919 3 + 61309027 C-----TT i panTro5.chr19 C 0 I 3 s panPan2.chr19 39880046 3 + 64411610 c-----tt i panPan2.chr19 C 0 I 3 s gorGor5.CYUI01015150v1 6297732 3 - 8369475 c-----tt i gorGor5.CYUI01015150v1 C 0 I 3 s nomLeu3.chr10 63890049 3 - 106955855 c-----tt i nomLeu3.chr10 C 0 I 7 s rheMac8.chr19 30202072 3 + 53671032 c-----tt i rheMac8.chr19 C 0 I 3 s macFas5.chr19 34655788 3 + 59248254 t-----tt i macFas5.chr19 C 0 I 3 s cerAty1.NW_012005268v1 5452540 3 + 7714307 c-----tt i cerAty1.NW_012005268v1 C 0 I 3 s manLeu1.NW_012102454v1 883689 3 - 2385121 c-----tt i manLeu1.NW_012102454v1 C 0 I 3 s calJac3.chr22 28553785 3 + 49145316 C-----TC i calJac3.chr22 C 0 I 2 s saiBol1.JH378197 5397216 8 + 8899380 CTTATTTC i saiBol1.JH378197 C 0 I 2 s cebCap1.NW_016107633v1 1606485 3 - 2680843 C-----TT i cebCap1.NW_016107633v1 C 0 I 42 s canFam3.chr1 4606494 3 - 122678785 T-----TT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 568928 533 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471420 0 + 5549422 C e mm10.chr7 111084586 1016 - 145441459 I e chlSab2.chr6 29264499 0 + 50890351 C e aotNan1.NW_018505377v1 355323 68 - 4471408 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e macNem1.NW_012011689v1 4522037 0 - 13342542 C a score=42033.000000 s hg38.chr19_GL383574v1_alt 65314 27 + 155864 ctctacatttatatatatatata--------tttt-- s panTro5.chr19 36133925 35 + 61309027 CTCTACATTTATATATATATATATTTTTTTTTTTT-- i panTro5.chr19 I 3 C 0 s panPan2.chr19 39880052 31 + 64411610 ctctacatttatatatatatata----ttttttta-- i panPan2.chr19 I 3 C 0 s gorGor5.CYUI01015150v1 6297738 27 - 8369475 ctctacatttatatatatatatt--------ttta-- i gorGor5.CYUI01015150v1 I 3 C 0 s nomLeu3.chr10 63890059 23 - 106955855 ctctacatttatatatata------------tttt-- i nomLeu3.chr10 I 7 C 0 s rheMac8.chr19 30202078 25 + 53671032 tacatcatttatatatatata----------tttt-- i rheMac8.chr19 I 3 C 0 s macFas5.chr19 34655794 25 + 59248254 tacatcatttatatatatatt----------tttt-- i macFas5.chr19 I 3 C 0 s cerAty1.NW_012005268v1 5452546 23 + 7714307 tacatcatttatatatata------------tttt-- i cerAty1.NW_012005268v1 I 3 C 0 s chlSab2.chr6 29264499 13 + 50890351 ------------ATATATATA----------TTTT-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883695 25 - 2385121 tacatcatttatatatatata----------tttt-- i manLeu1.NW_012102454v1 I 3 C 0 s calJac3.chr22 28553790 29 + 49145316 CTCTACATTTGTGGTTTTTTAAATA------TTCT-- i calJac3.chr22 I 2 I 1 s saiBol1.JH378197 5397226 24 + 8899380 CTCTATATTTGTGTTTTTTT-----------TTTT-- i saiBol1.JH378197 I 2 C 0 s canFam3.chr1 4606497 27 - 122678785 TCCTGCATGTTGCTCTATGTG----------TTTTTG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 568928 533 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471420 0 + 5549422 C e mm10.chr7 111084586 1016 - 145441459 I e aotNan1.NW_018505377v1 355323 68 - 4471408 I e cebCap1.NW_016107633v1 1606488 42 - 2680843 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e macNem1.NW_012011689v1 4522037 0 - 13342542 C a score=23077.000000 s hg38.chr19_GL383574v1_alt 65341 7 + 155864 tatatCC s panTro5.chr19 36133960 7 + 61309027 TATATCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880083 7 + 64411610 tatatCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297765 7 - 8369475 tataCCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890082 6 - 106955855 tatatC- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202103 7 + 53671032 tatatCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34655819 7 + 59248254 tatatCC i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5452569 7 + 7714307 tatatCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264512 7 + 50890351 TATATCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883720 7 - 2385121 tatatCC i manLeu1.NW_012102454v1 C 0 C 0 s saiBol1.JH378197 5397250 7 + 8899380 CATATTC i saiBol1.JH378197 C 0 I 2 s canFam3.chr1 4606524 3 - 122678785 --TAC-- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 568928 533 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471420 0 + 5549422 C e mm10.chr7 111084586 1016 - 145441459 I e aotNan1.NW_018505377v1 355323 68 - 4471408 I e cebCap1.NW_016107633v1 1606488 42 - 2680843 I e calJac3.chr22 28553819 1 + 49145316 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I e macNem1.NW_012011689v1 4522037 0 - 13342542 C a score=582060.000000 s hg38.chr19_GL383574v1_alt 65348 165 + 155864 CCCCCCCCCGTGtttttttttttttttttttttttttttgagacagagtcaacctctgtcacccaggctggagtgcagtggggcacgatctcagctcactgcaacctccac-cgcccgggttcatgccattctcctgcctcaccctcctgagtagctgggactaca s panTro5.chr19 36133967 152 + 61309027 CCCCCC-----------ttttttttttttttttttttttgagacagagtcaacctctgtcacccaggctggagttcagt--ggcacgatctcagctcactgcaacctccac-tgcctgggttcgtgccattctcctgcctcaccctcctgagtagctgggactaca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880090 152 + 64411610 CCCCCC-----------CCttttttttttttttcttttgtagacagagtcaacctctgtcacccaggctggagtgcagt--ggcacgatctcagctcactgcaacctccac-cgcctgggttcgtgccattctcctgcctcaccctcctgagtagctgggactaca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297772 140 - 8369475 CCCGCt-----------------------ttttttttttgagacagagtcaacctctgtcacccaggctggagtgcagt--ggcacgatctcagctcactgcaacctccac-cgcctgggttcatgccattctcctgcctcaccctcctgagtagctgggactaca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890088 146 - 106955855 -----------------CTTAttttttttttttttttttgaaacagagtcaacctctgtcgcccaggctggagtgcagt--ggcgcgatctcagctcactgcaacctccac-ctcccaggttcaggccattcttctgcctcaccctcctgagtagctgggactaca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202110 160 + 53671032 TCCCACCCCCCCCC---ttttttttttttttttttttttgagacggagtctcgctctgtcacccaggctagagtgcagt--ggtgctatctcagctcattgcaacctccac-ctcctgggttcatgccattcttctgcctcagccttccaagtagctgggactaca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34655826 160 + 59248254 TCCCACCCCCCCCC---ttttttttttttttttttttttgagacggagtctcgctctgtcacccaggctagagtgcagt--ggtgctatctcagctcattgcaacctccgc-ctcctgggttcatgccattcttctgcctcagccttccaagtagctgggactaca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522037 137 - 13342542 --------------------------ttttcttttttttgagacggagtctcgctctgtcacccaggctagagtgcagt--ggtgctatctcagctcattgcaacctccgc-ctcctgggttcatgccattcttctgcctcagccttccaagtagctgggactaca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452576 151 + 7714307 TCCCCCCCTCC------------ttttttttttttttttgagacggagtctcgctctgtcacccaggctggagtgcagt--ggtgctatctcagctcattgcaacctccgc-ctcctgggttcatgccattcttctgcctcagccttccaagtagctgggactaca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264519 158 + 50890351 TCCCCCCACCt--t---ttttttttttttttttttttttgagacggagtctcactctgtcacccaggctggagtgcagt--ggtgctatctcagctcattgcaacctccgc-ctccttggttcatgccattcttctgcctcagccttccaagtagctgagactaca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883727 145 - 2385121 CCCCCCC------------------ttttttttttttttgagatggagtctcgctctgtcacccaggctggagtgtagt--ggtgctatctcagctcattgcaacctccgc-ctcctgggttcatgccattcttctgcctcagccttccaagtagctgggactaca i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5471420 121 + 5549422 ------------------------------tttttttt-----cagagtctcactgttgcaccca-----gagtgctgt--ggcg---tcacagctcacagcaacctcaaagctcttgggcttcagcagttctcttgcctcagcctcccaagtagctggcactaca i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4606527 8 - 122678785 ------------------------------------------------------------------------GTGCTGT--G------------------------------------------------------------------------------------ i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 568928 533 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e mm10.chr7 111084586 1016 - 145441459 I e aotNan1.NW_018505377v1 355323 68 - 4471408 I e cebCap1.NW_016107633v1 1606488 42 - 2680843 I e saiBol1.JH378197 5397257 2 + 8899380 I e calJac3.chr22 28553819 1 + 49145316 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=34692.000000 s hg38.chr19_GL383574v1_alt 65513 5 + 155864 tatgc s panTro5.chr19 36134119 5 + 61309027 tatgc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880242 5 + 64411610 tatgc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297912 5 - 8369475 tatgc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890234 5 - 106955855 tatgc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202270 5 + 53671032 tatgc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34655986 5 + 59248254 tatgc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522174 5 - 13342542 TATGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452727 5 + 7714307 TATGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264677 5 + 50890351 tatgc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883872 5 - 2385121 tatgc i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553820 5 + 49145316 TAAGC i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5397259 5 + 8899380 TGCGC i saiBol1.JH378197 I 2 C 0 s otoGar3.GL873654 5471541 3 + 5549422 --ggc i otoGar3.GL873654 C 0 I 2 s canFam3.chr1 4606535 3 - 122678785 --TGC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 568928 533 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e mm10.chr7 111084586 1016 - 145441459 I e aotNan1.NW_018505377v1 355323 68 - 4471408 I e cebCap1.NW_016107633v1 1606488 42 - 2680843 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=12000.000000 s hg38.chr19_GL383574v1_alt 65518 1 + 155864 c s panTro5.chr19 36134124 1 + 61309027 c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880247 1 + 64411610 c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297917 1 - 8369475 c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890239 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202275 1 + 53671032 c i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34655991 1 + 59248254 c i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522179 1 - 13342542 C i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452732 1 + 7714307 C i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264682 1 + 50890351 c i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883877 1 - 2385121 c i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553825 1 + 49145316 C i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397264 1 + 8899380 C i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606530 1 - 2680843 C i cebCap1.NW_016107633v1 I 42 C 0 s otoGar3.GL873654 5471546 1 + 5549422 c i otoGar3.GL873654 I 2 I 133 s canFam3.chr1 4606538 1 - 122678785 C i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 568928 533 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e mm10.chr7 111084586 1016 - 145441459 I e aotNan1.NW_018505377v1 355323 68 - 4471408 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=621940.000000 s hg38.chr19_GL383574v1_alt 65519 78 + 155864 ATGGAATACAGAATTTTGTTT-AATTTGACTCATTATATTTTAC-CCTTTTTATTCAGAAAAAGAGAGAGCTCCCCTCCC s panTro5.chr19 36134125 78 + 61309027 ATGGAATACAGAATTTTGTTT-AATTTGACTCATTATATTTTAC-CCTTTTTATTCAGAAAAAGAGAGAGCTCCCCTCCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880248 78 + 64411610 ATGGAATACAGAATTTTGTTT-AATTTGACTCATTATATTTTAC-CCTTTTTATTCAGAAAAAGAGAGAGCTCCCCTCCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297918 78 - 8369475 ATGGAATACAGAATTTTGTTT-AATTTGACTCATTATATTTTAC-CCTTTTTATTCAGAAAAAGAGAGCGCTCCCCTCCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890240 78 - 106955855 ATGGAATACAGAATTTTGTTT-CATTTGACTCATTATATTTTAC-CTTTTTTATTCAGAAAAAGAGAGAGCTCCCCTCCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202276 74 + 53671032 ATGGAATACAGAATTTTGTTT-AATTTGACTCATTATATTTTAC-CTTTTTTATTCAGAAAAAGA----GCTCCCCTCCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34655992 74 + 59248254 ATGGAATACAGAATTTTGTTT-AATTTGACTCATTATATTTTAC-CTTTTTTATTCAGAAAAAGA----GCTCCCCTCCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522180 74 - 13342542 ATGGAATACAGAATTTTGTTT-AATTTGACTCATTATATTTTAC-CTTTTTTATTCAGAAAAAGA----GCTCCCCTCCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452733 74 + 7714307 ATGGAATACAGAATTTTGTTT-AATTTGACTCATTATATTTTAC-CTTTTTTATTCAGAAAAAGA----GCTCCCCTCTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264683 74 + 50890351 ATGGAATACAGAATTTTGTTT-AATTTGACTCATTATATTTTAC-CTTTTTTATTCAGAAAAAGA----GCTCCCCTCCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883878 74 - 2385121 ATGGAATACAGAATTTTGTTT-AATTTGACTCATTATATTTTAC-CTTTTTTATTCAGAAAAAGA----GCTCCCCTCCC i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553826 77 + 49145316 ATGGAATACAGAATTTTTTTTTAATTTGACTCAT--TATTTCAG-CTTTTTTATTCAAAAAAAGAGAGAGCTTCCCTCCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397265 77 + 8899380 ATGGAATACAGAATTTTTTTTAGATTTGACTCAT--TATTTCAG-CTTTTTTATTCAGAAAAAGAGAGCGCTTCCCTCCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606531 74 - 2680843 ATGGAATACAGAATTTTTTTTAAATTTGACTC-----ATTTCAG-CTTTTTTATTCAGAAAAAGAGAGAGCTTCCCTCCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 355391 75 - 4471408 ATGGAATACAGAATTTTTTTAAAATTTGACTCAT--TATTTCAG-CTTTTTTATTCAGAAAAAGAGA--GCTTCCCTCCC i aotNan1.NW_018505377v1 I 68 C 0 s canFam3.chr1 4606539 71 - 122678785 AT-GAATACAAAG---GGTTT-GGTTTGATTTACTGTATTTCACTTTTTTTTGTTTTGGGAAAGAAAGAACTTCTC---- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 568928 533 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471547 133 + 5549422 I e mm10.chr7 111084586 1016 - 145441459 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=220104.000000 s hg38.chr19_GL383574v1_alt 65597 21 + 155864 AAAATAAAATAACTGCCATAC s panTro5.chr19 36134203 21 + 61309027 AAAATAAAATAACTGCCATAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880326 21 + 64411610 AAAATAAAATAACTGCCATAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6297996 21 - 8369475 AAAATAAAATAACTGCCATAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890318 21 - 106955855 AAAATAAAATAACTGCCATAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202350 21 + 53671032 AAAATAAAATAACTGCCATAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656066 21 + 59248254 AAAATAAAATAACTGCCATAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522254 21 - 13342542 AAAATAAAATAACTGCCATGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452807 21 + 7714307 AAAATAAAATAACTGCCATAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264757 21 + 50890351 AAAATAAAATAACTGCCATAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883952 21 - 2385121 AAAATAAAATAACTGCCATAC i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553903 21 + 49145316 AAAATAAAATAATTGCTATAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397342 21 + 8899380 AAAATAAAATAATTGCTATAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606605 21 - 2680843 AAAATAAAATAATTGCTATAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 355466 21 - 4471408 AAAATAAAATAATTGCTATAC i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111085602 16 - 145441459 AAGATAAACTAAAAGC----- i mm10.chr7 I 1016 C 0 s canFam3.chr1 4606610 21 - 122678785 AAAATAAGATAATTGCCATAC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 568928 533 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471547 133 + 5549422 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=972728.000000 s hg38.chr19_GL383574v1_alt 65618 99 + 155864 ---------------------------------------TATCTTTCATTGCCCTTCAAAACTCACCCCACCAAAGAGGTTCATTAACAGAACAGTGCATATTCTTCCCGA-TTTTTTTTGTAGATTTTACAGACACAG s panTro5.chr19 36134224 99 + 61309027 ---------------------------------------TATCTTTCATTGCCCTTCAAAACTCATCCCACCAAAGAGGTTCCTTAACAGAACAGTGCATATTCTTCCAGA-TTTTTTTTGTAGATTTTACAGACACAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880347 99 + 64411610 ---------------------------------------TATCTTTCATTGCCCTTCAAAACTCATCCCACCAAAGAGGTTCCTTAACAGAACAGTGCATATTCTTCCAGA-TTTTTTTTGTAGATTTTACAGACACAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298017 98 - 8369475 ---------------------------------------TATCTTTCATTGCCCTTC-AAACTCACCCCACCAAAGAGGTTCATTAACAGAACAGTGCATATTCTTCCAGA-TTTTTTTTGTAGATTTTACAGACACAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890339 97 - 106955855 ---------------------------------------TATCTTTCATTGCCCTTCAAAACTAACCCCACCAAAGGGGTTCATTAACAGAACAGTGAATATTCTTCCAGA-TTTTTTTTGTAGATTTTACAG--ACAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202371 100 + 53671032 ---------------------------------------TATCTTTCATTGCCCTTCAAAACTCACCCCACCAAAGAGGTTCGTTAACAGAACAGTGAATATTCTTCCAGATTTTTTTTTGTAGATTTTACAGCCACAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656087 100 + 59248254 ---------------------------------------TATCTTTTATTGCCCTTCAAAACTCACCCCACCAAAGAGGTTCGTTAACAGAACAGTGAATATTCTTCCAGATTTTTTTTTGTAGATTTTACAGACACAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522275 100 - 13342542 ---------------------------------------TATCTTTCATTGCCCTTCAAAACTCACCCCACCAAAGAGGTTCGTTAACAGAACAGTGAATATTCTTCCAGATTTTTTTTTGTAGATTTTACAGACACAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452828 100 + 7714307 ---------------------------------------TATCTTTCATTGCCCTTCAAAACTCACCCCACCAAAGAGGTTCGTTAACAGAACAGTGAATATTCTTCCAGATTTTTTTTTGTAGATTTTACAGACACAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264778 100 + 50890351 ---------------------------------------TATCTTTCATTGCCCTTCAAAACTCACCCCACCAAAGAGGTTCGTTAACAGAACAGTGAATATTCTTCCAGATTTTTTTTTGTAGATTTTACAGACACAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 883973 100 - 2385121 ---------------------------------------CATCTTTCATTGCCCTTCAAAACTCACCCCACCAAAGAGGTTCGTTAACAGAACAGTGAATATTCTTCCAGATTTTTTTTTGTAGATTTTACAGACACAG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28553924 94 + 49145316 ---------------------------------------TATCTTTCATTGCCCTTCAAAACTCACCCCACC--AGAGGTTCATTAACAGAACAGTGAATAGTCTTCCATA--TTCTTTTGTAGATTTTACAG--ACAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397363 96 + 8899380 ---------------------------------------TATCTTTAATTGCCCTTCAAAACTCACTCCACCAAAGAGGTTCATTAACAGAACAGTGAATGATCTTCCAGA--TTCTTTTGTAGATTTTACAG--ACAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606626 96 - 2680843 ---------------------------------------TATCTTTCATTGCTCTTCAAAACTCACCCCACCAAAGAGGTTCATTAACAGAACAGTGAATAATCTTCCAGA--TTCTTTTGTAGATTTTACAG--ACAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 355487 96 - 4471408 ---------------------------------------TGTCTTTCATTGCCCTTCAAAACTCACCCCACCAAAGAGGTTCATTAACAGAACAGTGAATAATCTTCCAGA--TTCTTTTGTAGATTTTACAA--ACAG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 569461 95 + 2501019 ---------------------------------------TATCTTTTATTGCCCTTCAAAACTCACCCCA----AGAGGTTAATTAAAAGAACAGTGAATATTCTTTCAAA-TTTTTTTCTTAGATTTTACAGACATAG i proCoq1.NW_012149263v1 I 533 C 0 s mm10.chr7 111085618 83 - 145441459 --------------------------------------------TTCACTACCCTCC---------TCCACCACTAAGGGTCACTAACAGAACAGTGAATTTTCTTGCAG---TTTCTCCTTGGATTTTACACACATAG i mm10.chr7 C 0 I 255 s canFam3.chr1 4606631 107 - 122678785 TACCATCATTTAAAAATCATATAAAGTAATAAATAAAAGTACCTTTAAGTGCCCTTCAAAATTCATCTCCT----AAAGTTCATTAACAGAACAGAGACTATTCTTTCCGA---------------------------- i canFam3.chr1 C 0 C 0 e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471547 133 + 5549422 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=127063.000000 s hg38.chr19_GL383574v1_alt 65717 17 + 155864 ACATCTATAC---CC---AAAAC s panTro5.chr19 36134323 17 + 61309027 ACATCTATAC---CC---AAAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880446 20 + 64411610 ACATCTATAC---CCTTAAAAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298115 16 - 8369475 ACATCTATAC---CC----AAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890436 17 - 106955855 ACATCTATAC---CC---AAAAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202471 20 + 53671032 ACATCTATACTATCC---AAAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656187 20 + 59248254 ACATCTATACTATCC---AAAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522375 20 - 13342542 ACATCTATACTATCC---AAAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452928 20 + 7714307 ACATCTATACTATCC---AAAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264878 20 + 50890351 ACATCTATACTATCC---AAAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884073 20 - 2385121 ACATCTATACTATCC---AAAAC i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28554018 17 + 49145316 ACATCTATAC---CT---AAAAC i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5397459 17 + 8899380 ACATCTATAC---CT---AAAAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606722 17 - 2680843 ACATCTATAC---CT---AAAAC i cebCap1.NW_016107633v1 C 0 I 1 s aotNan1.NW_018505377v1 355583 17 - 4471408 ATATCTATAC---CT---AAAAC i aotNan1.NW_018505377v1 C 0 I 1 s proCoq1.NW_012149263v1 569556 17 + 2501019 ACATCTATAC---CC---AAAAC i proCoq1.NW_012149263v1 C 0 I 1 s canFam3.chr1 4606738 1 - 122678785 ----------------------C i canFam3.chr1 C 0 C 0 e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471547 133 + 5549422 I e mm10.chr7 111085701 255 - 145441459 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=6600.000000 s hg38.chr19_GL383574v1_alt 65734 1 + 155864 C s panTro5.chr19 36134340 1 + 61309027 C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880466 1 + 64411610 C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298131 1 - 8369475 C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890453 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202491 1 + 53671032 C i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656207 1 + 59248254 C i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522395 1 - 13342542 C i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452948 1 + 7714307 C i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264898 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884093 1 - 2385121 C i manLeu1.NW_012102454v1 C 0 C 0 s canFam3.chr1 4606739 1 - 122678785 C i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 569573 1 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471547 133 + 5549422 I e mm10.chr7 111085701 255 - 145441459 I e aotNan1.NW_018505377v1 355600 1 - 4471408 I e cebCap1.NW_016107633v1 1606739 1 - 2680843 I e saiBol1.JH378197 5397476 0 + 8899380 C e calJac3.chr22 28554035 1 + 49145316 I e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=2560.000000 s hg38.chr19_GL383574v1_alt 65735 1 + 155864 t s panTro5.chr19 36134341 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880467 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298132 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890454 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202492 1 + 53671032 C i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656208 1 + 59248254 C i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522396 1 - 13342542 C i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452949 1 + 7714307 C i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264899 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884094 1 - 2385121 C i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28554036 1 + 49145316 T i calJac3.chr22 I 1 C 0 s proCoq1.NW_012149263v1 569574 1 + 2501019 T i proCoq1.NW_012149263v1 I 1 C 0 s canFam3.chr1 4606740 1 - 122678785 T i canFam3.chr1 C 0 C 0 e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471547 133 + 5549422 I e mm10.chr7 111085701 255 - 145441459 I e aotNan1.NW_018505377v1 355600 1 - 4471408 I e cebCap1.NW_016107633v1 1606739 1 - 2680843 I e saiBol1.JH378197 5397476 0 + 8899380 C e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=21294.000000 s hg38.chr19_GL383574v1_alt 65736 3 + 155864 ttt s panTro5.chr19 36134342 3 + 61309027 ttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880468 3 + 64411610 TTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298133 3 - 8369475 ttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890455 3 - 106955855 ttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202493 3 + 53671032 ttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656209 3 + 59248254 ttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522397 3 - 13342542 ttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452950 3 + 7714307 ttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264900 3 + 50890351 TTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884095 3 - 2385121 TTT i manLeu1.NW_012102454v1 C 0 C 0 s proCoq1.NW_012149263v1 569575 3 + 2501019 TTT i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4606741 3 - 122678785 TTT i canFam3.chr1 C 0 C 0 e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471547 133 + 5549422 I e mm10.chr7 111085701 255 - 145441459 I e aotNan1.NW_018505377v1 355600 1 - 4471408 I e cebCap1.NW_016107633v1 1606739 1 - 2680843 I e saiBol1.JH378197 5397476 0 + 8899380 C e calJac3.chr22 28554037 0 + 49145316 C e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=23257.000000 s hg38.chr19_GL383574v1_alt 65739 3 + 155864 ttt s panTro5.chr19 36134345 3 + 61309027 ttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880471 3 + 64411610 TTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298136 3 - 8369475 ttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890458 3 - 106955855 ttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202496 3 + 53671032 ttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656212 3 + 59248254 ttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522400 3 - 13342542 ttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452953 3 + 7714307 ttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264903 3 + 50890351 TTt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884098 3 - 2385121 TTT i manLeu1.NW_012102454v1 C 0 C 0 s proCoq1.NW_012149263v1 569578 3 + 2501019 TTT i proCoq1.NW_012149263v1 C 0 I 333 s otoGar3.GL873654 5471680 3 + 5549422 ttt i otoGar3.GL873654 I 133 C 0 s canFam3.chr1 4606744 3 - 122678785 TTC i canFam3.chr1 C 0 C 0 e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e mm10.chr7 111085701 255 - 145441459 I e aotNan1.NW_018505377v1 355600 1 - 4471408 I e cebCap1.NW_016107633v1 1606739 1 - 2680843 I e saiBol1.JH378197 5397476 0 + 8899380 C e calJac3.chr22 28554037 0 + 49145316 C e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=-7402.000000 s hg38.chr19_GL383574v1_alt 65742 10 + 155864 tttt--------------------------------------------------------------------------------tttttt s panTro5.chr19 36134348 6 + 61309027 tttt--------------------------------------------------------------------------------tt---- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880474 90 + 64411610 TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCCCCTGTTGCGTGTCTCAGGtttttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298139 10 - 8369475 tttg--------------------------------------------------------------------------------tttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890461 7 - 106955855 tttt--------------------------------------------------------------------------------ttt--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202499 10 + 53671032 ttct--------------------------------------------------------------------------------tttttc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656215 10 + 59248254 ttct--------------------------------------------------------------------------------tttttc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522403 10 - 13342542 ttct--------------------------------------------------------------------------------tttttc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452956 10 + 7714307 ttct--------------------------------------------------------------------------------tttttc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264906 10 + 50890351 ttct--------------------------------------------------------------------------------tttttc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884101 10 - 2385121 TTCT--------------------------------------------------------------------------------Cttttc i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5471683 10 + 5549422 tttt--------------------------------------------------------------------------------cgtttg i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4606747 10 - 122678785 TTAT--------------------------------------------------------------------------------GATTTT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 569581 333 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e mm10.chr7 111085701 255 - 145441459 I e aotNan1.NW_018505377v1 355600 1 - 4471408 I e cebCap1.NW_016107633v1 1606739 1 - 2680843 I e saiBol1.JH378197 5397476 0 + 8899380 C e calJac3.chr22 28554037 0 + 49145316 C e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=890.000000 s hg38.chr19_GL383574v1_alt 65752 11 + 155864 tttt--------------ccccctg s panTro5.chr19 36134354 3 + 61309027 ----------------------ctg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880564 11 + 64411610 tttt--------------ttttctg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298149 9 - 8369475 tttt--------------tt--ctg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890468 3 - 106955855 ----------------------ctg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202509 25 + 53671032 tttcttttttttttttttttttttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656225 23 + 59248254 tttc--ttttttttttttttttttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522413 25 - 13342542 tttcttttttttttttttttttttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452966 22 + 7714307 tttc---tttttttttttttttttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264916 19 + 50890351 tttc------ttttttttttttttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884111 22 - 2385121 tttc---tttttttttttttttttg i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5471693 4 + 5549422 tttt--------------------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 569581 333 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e mm10.chr7 111085701 255 - 145441459 I e canFam3.chr1 4606757 0 - 122678785 C e aotNan1.NW_018505377v1 355600 1 - 4471408 I e cebCap1.NW_016107633v1 1606739 1 - 2680843 I e saiBol1.JH378197 5397476 0 + 8899380 C e calJac3.chr22 28554037 0 + 49145316 C e colAng1.NW_012111697v1 2317832 1825 + 4274983 I a score=687102.000000 s hg38.chr19_GL383574v1_alt 65763 121 + 155864 gagatagaatctcgctctgtcacccagg-ctggagtgtagtggtgcgatctctgctcactgcagcctttgcctcccgggttcaagccattctcctgcctcagcctcctgggtaggtgggatt s panTro5.chr19 36134357 121 + 61309027 gagatagaatctcgctgtgtcacccagg-ctggagtgtagtggtgcgatctctgctcactgctgcctttgcctcccgggttcaagccattctcctgcctcagcctcctgggtaggtgggatt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880575 121 + 64411610 gagatagaatctcgctctgtcacccagg-ctggagtgtagtggtgcgatctctgctcactgctgcctttgcctcccgggttcaagccattctcctgcctcagcctcctgggtaggtgggatt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298158 120 - 8369475 gaaatagaatctcgctctgtcacccagg-ctggagtgtagtggtgcgatctctgctcactgcagcctttgcctcccgggttcaagccattctcctgcctcagcctcctgggtagg-gggatt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890471 121 - 106955855 gagacagaatctcgctctgtcacccagg-ctagagtatagtggtgcaatctctgctcactgcagccttcacctcctgggttcaagccattctcctgcctcagcctcctgggtaggtgggatt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202534 121 + 53671032 gagacagagtctcgctctgttgcccagg-ctggagcgtagtggcgcaatcttggttcactgcaaccttcgcttcctgggttcaagcgattctcctgtctcagcctcctgggtaggtgggatt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656248 121 + 59248254 gagacagagtctcgctctgttgcccagg-ctggagcgtagtggcgcaatcttggttcactgcaaccttcgcttcctgggttcaagcgattctcctgtctcagcctcctgggtaggtgggatt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522438 121 - 13342542 gagacagagtctcgctctgttgcccagg-ctggagcgtagtggcgcaatcttggttcactgcaaccttcgcttcctgggttcaagcgattctcctgtctcagcctcctgggtaggtgggatt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5452988 122 + 7714307 gagacagagtctcgctctgttgcccaggcctggagtgtagtggcgcgatctcggctcactgcaaccttcgcctcctgggtttaagcgattttcctgtctcagcctcctgggtaggtgggatt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29264935 121 + 50890351 gagacagagtctcgctctgttgcccagg-ctggagtatagtggcacgatctcggctcactgcaaccttcacctcctgggttcaagcgattttcctgtctcagcctcctgggtaggtgggatt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884133 121 - 2385121 gagacagtgtctctctctgttgcccagg-ctggagtgtagtggcgcgatctcggctcactgcaaccttcgcctcctgggttcaagcgattttcctgtctcagcctcctgggtaggtgggatt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2319657 121 + 4274983 gagacagagtctcgctctgtttcccagg-ctggagtgtagtggcgtgatctcggctcactgcaaccttcgcctcctgggttcaagagattctcatgtctcagcctcctgggtaggtgggatt i colAng1.NW_012111697v1 I 1825 C 0 s otoGar3.GL873654 5471697 107 + 5549422 gagacag--tctgactttttcaccccag-----------gtagcatgatcatagttcactataacttcgaactcctgggctcaagtgatcctcctgatc--acttcccaagtagccaggact i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 569581 333 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e mm10.chr7 111085701 255 - 145441459 I e canFam3.chr1 4606757 0 - 122678785 C e aotNan1.NW_018505377v1 355600 1 - 4471408 I e cebCap1.NW_016107633v1 1606739 1 - 2680843 I e saiBol1.JH378197 5397476 0 + 8899380 C e calJac3.chr22 28554037 0 + 49145316 C a score=980009.000000 s hg38.chr19_GL383574v1_alt 65884 166 + 155864 a---caggcatacgccaccacgcctggctaatgtttctgtatttttagtagagatggggtttcaccttgttggtcaggctggtctcgagctcctgacctcgtgat-ccgcccgccccggcctcccaaagtgctggggttacaggcgtgagccaccgcgcctggccCCAAA s panTro5.chr19 36134478 166 + 61309027 a---caggcatacgccaccatgcctggctaatgtttctgtatttttagtagagatggggtttcaccttgttggtcaggctggtctcgagctcctgacctcgtgat-ccgcccgccccggcctcccaaagtgctggggttacaggcgtgagccaccgcgcctggccCCAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880696 166 + 64411610 a---caggcatacgccaccatgcctggctaatgtttctgtatttttagtagagatggggtttcaccttgttggtcaggctggtctcgagctcctgacctcgtgat-ccgcccgccccggcctcccaaagtgctggggttacaggcgtgagccaccgcgcctggccCCAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298278 166 - 8369475 a---caggcatacgccaccacgcctggctaatgtttctgtatttttagtagagatggggtttcaccttgttggtcaggctggtctcgagctcctgacctcgtgat-ccgcccgccccggcctcccaaagtgctggggttacaggtgtgagccaccgcgcctggccCCAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890592 166 - 106955855 a---caggcacgcgccaccacgcccggctaatgtttctgtatttttagtagagatggcgtttcaccgtgttggtcaggctcgtctcgagctcctgacctcgtgat-ctgcccgccccggcctcccaaagtgctggggttacaggcgtgagccaccgcgcccggccCCAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202655 166 + 53671032 a---caggcatgcgccaccacgcccggctaatgtttctgtatttttactagagatggtgtttcaccatgttggtcaggctggtctcgagcttctgacctcatgat-ccgcccgccctggcctcccaaagtgctggggttataggcttgagccactgcgcccagccCCAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656369 166 + 59248254 a---caggcatgcgccaccacgcccggctaatgtttctgtatttttactagagatggtgtttcaccatgttggtcaggctggtctcgagcttctgacctcatgat-ccgcccgccctggcctcccaaagtgctggggttataggcttgagccactgcgcccagccCCAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522559 166 - 13342542 a---caggcctgcgccaccacgcccggctaatgtttctgtatttttactagagatggtgtttcaccatgttggtcaggctggtctcgagcttctgacctcatgat-ccgcctgccctggcctcccaaagtgctggggttataggcttgagccactgcgcccagccCCAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453110 169 + 7714307 acagcaggcatgcgccaccacgcccggctaatgtttctgtatttttagtagagatggtgtttcaccatgttggtcaggctggtctcgagcttctgacctcatgat-ccacccgccctggcctcccaaagtgctggggttataggcttgagccactgcgcccagccCCAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265056 166 + 50890351 a---caggcatgcgccaccatgcccggctaatgtttctgtatttttagtagaggtggtgtttcaccgtgttggtcaggctggtctcgagcttctgatctcatgat-ccgcccgccctggcctcccagagtgctggggttataggcttgagccactgcgcccagccCCAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884254 166 - 2385121 a---caggcatgcgccaccacgcccggctaatgtttctgtatttttagtagagatggtgtttcaccgtgttggtcaggctggtctcgagcttctgacctcatgat-ccgccctccctggcctcccaaagtgctggggttataggcttgagccactgcgcccagccCCAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2319778 166 + 4274983 a---caggcatgcgccaccacgcccggctaatgtttctgtatttttagtagagatggtgtttcaccgtgttggtcaggctggtctcaagcttctgacctcgtgat-ccgcccgccctggcctcccaaagtgctggggttacaggcttgagccactgcgcccagccCCAAA i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5471804 164 + 5549422 g---taggtacatgccaccatgcccagctaatttttctat-ttttctgtagtggtaaggtctaac--tcttactcaggctggtctcaaactcctgacctcaagccatttcctgcctcagcctcctatagtgttaggattataggtgtgagtcattattcctggccTTAGA i otoGar3.GL873654 C 0 I 1414 s canFam3.chr1 4606757 24 - 122678785 A---CAAACAT----------------------------------------------------------------AGACTGTACTTGAACT------------------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 569581 333 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e mm10.chr7 111085701 255 - 145441459 I e aotNan1.NW_018505377v1 355600 1 - 4471408 I e cebCap1.NW_016107633v1 1606739 1 - 2680843 I e saiBol1.JH378197 5397476 0 + 8899380 C e calJac3.chr22 28554037 0 + 49145316 C a score=17171.000000 s hg38.chr19_GL383574v1_alt 66050 3 + 155864 ATA s panTro5.chr19 36134644 3 + 61309027 ACA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880862 3 + 64411610 ACA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298444 3 - 8369475 ACA i gorGor5.CYUI01015150v1 C 0 I 2 s nomLeu3.chr10 63890758 3 - 106955855 ACA i nomLeu3.chr10 C 0 I 2 s rheMac8.chr19 30202821 3 + 53671032 ACA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656535 3 + 59248254 ACA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522725 3 - 13342542 ACA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453279 3 + 7714307 ACA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265222 3 + 50890351 ACA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884420 3 - 2385121 ACA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2319944 3 + 4274983 ACA i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 569581 333 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471968 1414 + 5549422 I e mm10.chr7 111085701 255 - 145441459 I e canFam3.chr1 4606781 0 - 122678785 C e aotNan1.NW_018505377v1 355600 1 - 4471408 I e cebCap1.NW_016107633v1 1606739 1 - 2680843 I e saiBol1.JH378197 5397476 0 + 8899380 C e calJac3.chr22 28554037 0 + 49145316 C a score=910.000000 s hg38.chr19_GL383574v1_alt 66053 1 + 155864 T s gorGor5.CYUI01015150v1 6298449 1 - 8369475 T i gorGor5.CYUI01015150v1 I 2 C 0 s nomLeu3.chr10 63890763 1 - 106955855 T i nomLeu3.chr10 I 2 C 0 s calJac3.chr22 28554037 1 + 49145316 T i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397476 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 569581 333 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471968 1414 + 5549422 I e mm10.chr7 111085701 255 - 145441459 I e chlSab2.chr6 29265225 0 + 50890351 C e canFam3.chr1 4606781 0 - 122678785 C e aotNan1.NW_018505377v1 355600 1 - 4471408 I e cebCap1.NW_016107633v1 1606739 1 - 2680843 I e colAng1.NW_012111697v1 2319947 0 + 4274983 C e manLeu1.NW_012102454v1 884423 0 - 2385121 C e cerAty1.NW_012005268v1 5453282 0 + 7714307 C e macNem1.NW_012011689v1 4522728 0 - 13342542 C e macFas5.chr19 34656538 0 + 59248254 C e rheMac8.chr19 30202824 0 + 53671032 C e panPan2.chr19 39880865 0 + 64411610 C e panTro5.chr19 36134647 0 + 61309027 C a score=767385.000000 s hg38.chr19_GL383574v1_alt 66054 73 + 155864 TTTTTTTTAAGACAGAAGGATCATGGTGTAATT------CTGGCTTGTGGCCGAGGCAT-TTTTAATAGTAGAGGTGAAT s panTro5.chr19 36134647 73 + 61309027 TTTTTTTTAAGACAGAAGGATCATGGTGTAATT------CTGGCTTGTGGCTGAGGCAT-TTTTAATAGTAGAGGTGAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880865 73 + 64411610 TTTTTTTTAAGACAGAAGGATCATGGTGTAATT------CTGGCTTGTGGCTGAGGCAT-TTTTAATAGTAGAGGTGAAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298450 73 - 8369475 TTTTTTTTAAGACAGAAGGATCATGGTGTAATT------CTGGCTTGTGGCTGAGGCAT-TTTTAATAGTAGAGGTGAAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890764 73 - 106955855 TTTTTTTTAAGACAGAAGGATCATGGTGTAATT------CTGGCTTGTGGCTGAGGCAT-TTTTAATAGTAGAGGTGAAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202824 73 + 53671032 CTTTTTTTAAGACAGAAGGATTATGGTGTAATT------CTGTCTTGTGGCTGAGGCAT-TTTTAATAGTAGAGGTGAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656538 73 + 59248254 CTTTTTTTAAGACAGAAGGATTATGGTGTAATT------CTGTCTTGTGGCTGAGGCAT-TTTTAATAGTAGAGGTGAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522728 73 - 13342542 CTTTTTTTAAGACAGAAGGATTATGGTGTAATT------CTGTCTTGTGGCTGAGGCAT-TTTTAATAGTAGAGGTGAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453282 73 + 7714307 CTTTTTTTAAGACAGAAGGATTATGATGTAATT------CTGGCTTGTGGCCGAGGCAT-TTTTAATAGTAGAGGTGAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265225 73 + 50890351 CTTTTTTTAAGACAGAAGGATTATGGTGTAATT------CTGGCTTGTGGCTGAGGCAT-TTTTAATAGTAGAGGTGAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884423 73 - 2385121 CTTTTTTTAAGACAGAAGGATTATGGTGTAATT------CTGGCTTGTGGCTGAGGCAT-TTTTAATAGTAGAGGTGAAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2319947 73 + 4274983 CTTTTTTTAAGACAGAAGGATTATGGTATAATT------CTGGCTTGTGGCTGAGGCAT-TTTTAATAGTAGAGGTGAAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554038 53 + 49145316 TTTTTTTTAAGACAGAAGGATCATGGTGTAATT------CTGGCTTGTGGCTGAGGCAT--------------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397477 73 + 8899380 TTTTTTTTAAGACAGAAAGATCATGGTGTAATT------GTGTCTTGTGGCTGAGGCAT-TTTTAATAGTAGAGGTGAAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606740 74 - 2680843 TTTTTTTTAAGACAGAAGGATTATGGTGTAATT------CTGGCTTGTGGCTGAGGCATTTTTTAATAGTAGAGGTGAAT i cebCap1.NW_016107633v1 I 1 C 0 s aotNan1.NW_018505377v1 355601 73 - 4471408 TTTTTTTTAAGACAGAAGGATCATGGTGTAATT------CTGGCTTGCGGCTGAGGCAT-TTTTAATAGTAGAGGTGAAT i aotNan1.NW_018505377v1 I 1 C 0 s canFam3.chr1 4606781 75 - 122678785 TTTTTTAGAAAACA----GATTATGCTATATTTACTTCCTTAGCTTGTGGCCAACATGT-TTTTAATAATGAACTTGAAT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 569581 333 + 2501019 I e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471968 1414 + 5549422 I e mm10.chr7 111085701 255 - 145441459 I a score=52763.000000 s hg38.chr19_GL383574v1_alt 66127 4 + 155864 GTTT s panTro5.chr19 36134720 4 + 61309027 GTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880938 4 + 64411610 GTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298523 4 - 8369475 GTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890837 4 - 106955855 GTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202897 4 + 53671032 GTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656611 4 + 59248254 GTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522801 4 - 13342542 GTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453355 4 + 7714307 GTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265298 4 + 50890351 GTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884496 4 - 2385121 GTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320020 4 + 4274983 GTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554091 3 + 49145316 -TTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397550 4 + 8899380 GTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606814 4 - 2680843 GTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 355674 4 - 4471408 GTTT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 569914 4 + 2501019 GTTT i proCoq1.NW_012149263v1 I 333 C 0 s canFam3.chr1 4606856 4 - 122678785 ATTT i canFam3.chr1 C 0 C 0 e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471968 1414 + 5549422 I e mm10.chr7 111085701 255 - 145441459 I a score=64806.000000 s hg38.chr19_GL383574v1_alt 66131 5 + 155864 CAAAC s panTro5.chr19 36134724 5 + 61309027 CAAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880942 5 + 64411610 CAAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298527 5 - 8369475 CAAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890841 5 - 106955855 TAAAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202901 5 + 53671032 TAAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656615 5 + 59248254 TAAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522805 5 - 13342542 TAAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453359 5 + 7714307 TAAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265302 5 + 50890351 TAAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884500 5 - 2385121 TAAAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320024 5 + 4274983 TAAAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554094 5 + 49145316 TAAAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397554 5 + 8899380 TAAAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606818 5 - 2680843 TAAAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 355678 5 - 4471408 TAAAC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 569918 5 + 2501019 TAAAC i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111085956 5 - 145441459 CAAAA i mm10.chr7 I 255 C 0 s canFam3.chr1 4606860 5 - 122678785 TAAAC i canFam3.chr1 C 0 C 0 e micMur3.chr22 3950787 1018 - 30143674 I e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471968 1414 + 5549422 I a score=282429.000000 s hg38.chr19_GL383574v1_alt 66136 19 + 155864 AT-CCTACTTATCTAGATTT s panTro5.chr19 36134729 19 + 61309027 AT-CCTACTTATCTAGACTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880947 19 + 64411610 AT-CCTACTTATCTAGACTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298532 19 - 8369475 AT-CCTACTTATCTAGATTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890846 19 - 106955855 AT-CCTACTTATCTAGATTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202906 19 + 53671032 AT-CCTGCTTATCTAGATTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656620 19 + 59248254 AT-CCTGCTTATCTAGATTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522810 19 - 13342542 AT-CCTGCTTATCTAGATTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453364 19 + 7714307 AT-CCTGCTTATCTAGATTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265307 19 + 50890351 AT-CCTGCTTATCTAGATTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884505 19 - 2385121 AT-CCTGCTTATCTAGATTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320029 19 + 4274983 AT-CCTACTTATCTAGATTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554099 19 + 49145316 AT-CCTGCTTATCTATATGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397559 19 + 8899380 AT-CCTGCTTACCTAGATGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606823 19 - 2680843 AT-CCTGCTTATCTAGATGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 355683 19 - 4471408 AT-CCTGCTTATCTAGATGT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3951805 19 - 30143674 AT-CCTGCTTATCTAGATTT i micMur3.chr22 I 1018 C 0 s proCoq1.NW_012149263v1 569923 19 + 2501019 AT-CCTGCTTATCTAGATTT i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111085961 18 - 145441459 ATACCTGCTTACCTAGA--T i mm10.chr7 C 0 C 0 s canFam3.chr1 4606865 19 - 122678785 AT-CCTGCTTATCTAGATTT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 311618 14 + 643850 I e otoGar3.GL873654 5471968 1414 + 5549422 I a score=1222808.000000 s hg38.chr19_GL383574v1_alt 66155 74 + 155864 A--TGTCTGGATATGCTGCT---GTGGGGTTTTGTGGTTTGTTTTCTCAAACCCAGGCAGTTTGCCAAACCTCAGCAAA s panTro5.chr19 36134748 74 + 61309027 A--TGTCTGGATATGCTGCT---GTGGGGTTTTGTGGTTTGTTTTCTCAAACCCAGGCAGTTTGCCAAACCTCAGCAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39880966 74 + 64411610 A--TGTCTGGATATGCTGCT---GTGGGGTTTTGTGGTTTGTTTTCTCAAACCCAGGCAGTTTGCCAAACCTCAGCAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298551 74 - 8369475 A--TGTCTGGATATGCTGCT---GTGGGGTTTTGTGGTTTGTTTTCTCAAACCCAGGCAGTTTGCCAAACCTCAGCAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890865 74 - 106955855 A--TGTCTGGATATGCTGCT---GTGGGGTTTTGTGGTTTGTTTTCTCAAACCTAGGCAGTTTGCCAAACCTCAGCAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202925 74 + 53671032 A--TGTCTGGATATGCTGCT---GTGGGGTTTTGTGGTTTGTTTTCTCAAACCCAGGCAGTTTGCCAAACCTCAGCAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656639 74 + 59248254 A--TGTCTGGATATGCTGCT---GTGGGGTTTTGTGGTTTGTTTTCTCAAACCCAGGCAGTTTGCCAAACCTCAGCAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522829 74 - 13342542 A--TGTCTGGATATGCTGCT---GTGGGGTTTTGTGGTTTGTTTTCTCAAACCCAGGCAGTTTGCCAAACCTCAGCAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453383 74 + 7714307 A--TGTCTGGATATGCTGCT---GTTGGGTTTTGTGGTTTGTTTTCTCAAACCCAGGCAGTTTGCCAAACCTCAGCAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265326 74 + 50890351 A--TGTCTGGATATGCTGCT---GTGGGGTTTTGTGGTTTGTTTTCTCAAACCTAGGCAGTTTGCCAAACCTCAGCAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884524 74 - 2385121 A--TGTCTGGATATGCTGCT---GTTGGGTTTTGTGGTTTGTTTTCTCAAACCCAGGCAGTTTGCCAAACCTCAGCAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320048 74 + 4274983 A--TGTCTGGATATGCTGCT---GTGGAATTTTGTGGTTTGTTTTCTCAAACCCAGGCAGTTTGCCAAACCTCAGCAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554118 74 + 49145316 A--TGTTTAGGTATGCCGCT---GTGGGGTTTTGTGGTTTGTTGTCTCAAACCCAGGCAGCTTGCCAAACCTCAGCAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397578 74 + 8899380 A--TGTCTGGGTATGCCGCT---GTGGAGTTTTGTGGTTTGTTGTCTCAAACCCAGGCAGCTTGCCAAACCTCAGCAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606842 74 - 2680843 A--TGTCTGGGTATGCTGCT---ATGGGGTTTTGTGGTTTGTTGTCTCAAACCCAGGCAGCTTGCCAAACCTCAGCAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 355702 74 - 4471408 A--TGTCTGGGTATGCTGCT---GTGGGGTTTTGTGGTTTGTTGTCTCAAACCCAGGCAGCTTGCCAAACCTCAGCAAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3951824 76 - 30143674 AAGTGTCTGGATATGCTGCC---GTGGGGTTTTGTGGTTTGTTTACTCAAACCCAGGCGGTTGGCCAAACCTCGGCAAA i micMur3.chr22 C 0 I 163 s proCoq1.NW_012149263v1 569942 76 + 2501019 AAGCGTCTGGATATGCTGCC---ATCGGGTTTTGTGGTTTGTTTTCTCAAACCCAGGCAGTTTGCCAAACCTCAGCAAA i proCoq1.NW_012149263v1 C 0 I 4 s mm10.chr7 111085979 64 - 145441459 A--TGTCTGGACGTGCTGCT---AGGTGGGTTTAT---------CCTCAAACTCAGGCAGTTTGCC-ATCCTCACCAAA i mm10.chr7 C 0 I 4 s canFam3.chr1 4606884 76 - 122678785 AAGTGTCTGGATATGCTGCT---GTGGTTTTTTGTAGTTTGTTTTCTCAAATGTGGGCATTTTGCCAAACTTCAGTGAA i canFam3.chr1 C 0 I 4 s dasNov3.JH563638 311632 77 + 643850 A--CATCTGGATTTGTTGCTACAATGGGTTTTTGTGGTTTGTTTCCTCAAACTCAGGCAGTTTGCCAAACCTCAGCAAA i dasNov3.JH563638 I 14 C 0 e otoGar3.GL873654 5471968 1414 + 5549422 I a score=1455736.000000 s hg38.chr19_GL383574v1_alt 66229 120 + 155864 CAGCGCAAACCTATCTTGTTACCCTGTAGTCACTT-CTCATCCTTGTCAGTATGTGTGGAGCATTTCACGCAATTGTGA----------TCATTAAACTCATACTG-GTTTCTGTTCTGCG--TTT-TTCAGTTA s panTro5.chr19 36134822 120 + 61309027 CAGCGCAAACCTATCTTGTTACCCTGTAGTCACTT-CTCATCCTTGTCAGTATGTGTGGAGCATTTCACGCAATTGTGA----------TCATTAAACTCATACTG-GTTTCTGTTCTGCG--TTT-TTCAGTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39881040 120 + 64411610 CAGCGCAAACCTATCTTGTTACCCTGTAGTCACTT-CTCATCCTTGTCAGTATGTGTGGAGCATTTCACGCAATTGTGA----------TCATTAAACTCATACTG-GTTTCTGTTCTGCG--TTT-TTCAGTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298625 120 - 8369475 CAGCGCAAACCTATCTTGTTACCCTGTAGTCACTT-CTCATCCTTGTCAGTATGTGTGGAGCATTTCACGCAATTGTGA----------TCATTAAACTCATACTG-GTTTCTGTTCTGTG--TTT-TTCAGTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63890939 120 - 106955855 CAGCACAAACCTGTC-TGTTACCCTGTAGTCACTT-CTCATCCTTGTCAGTATGTGTGGAGCATTTCACGCAATTGTGA----------TCATTAAACTCATACTGCTTTTCTGCTCTGCG--TTT-GTCAGTTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30202999 119 + 53671032 CAGCATAAACCTGTC-TGTTACCCTGTAGTCACTT-CTCATCCTTGTCAGTATGTGTGGAGCATTTCACACAATTGTGA----------TAATTAAACTCATACTG-CTTTCTGCTCTGCA--TTT-TTCAATTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656713 119 + 59248254 CAGCATAAACTTGTC-TGTTACCCTGTAGTCACTT-CTCATCCTTGTCAGTATGTGTGGAGCATTTCACACAATTGTGA----------TAATTAAACTCATACTG-CTTTCTGCTCTGCA--TTT-TTCAATTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4522903 119 - 13342542 CAGCATAAACCCGTC-TGTTACCCTGTAGTCACTT-CTCATCCTTGTCAGTATGTGTGGAGCATTTCACACAATTGTGA----------TAATTAAACTCATACTG-CTTTCTGCTCTGCA--TTT-TTCAATTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453457 119 + 7714307 CAGCATAAACCTGTC-TGTTACCCTGTAGTCACTT-CTCATCCTTGTCAGTATGTGTGGAGCATTTCACACAATTGTGA----------TAATTAAACTCATACTG-CTTTCTGCTCTGCA--TTT-TTCAATTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265400 119 + 50890351 CAGCATAAACCTGTC-TGTTACCCTGTAGTCACTT-CTCATCCTTGTCAGTATGTGTGGAGCATTTCACACAATTGTGA----------TAATTAAACTCATACTG-CTTTCTGCTCTGTA--TTT-TTCAATTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884598 116 - 2385121 CAGCATAAACCTGTC-TGTTACCCTGTAGTCACTT----ATCCTTGTCAGTATGTGTGGAGCATTTCACACAATTGTGA----------TAATTAAACTCATACTG-CTTTCTGCTCTGCA--TTT-TTCAATTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320122 119 + 4274983 CAGCACAAACCTGTC-TGTTACCTTGTAGTCACTT-CTCATCCTTGTCAGTATGTGTGGAGCATTTCACGCAGTTGTGA----------CAATTAAACTCATACTG-CTTTCTGCTCTGCA--TTT-TTCAGTTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554192 119 + 49145316 GAGCACAAACCTGTC-TGTTAACCTGTAGTCACTT-CTCATGCTTGTCAGTATGTGTGGAGCGTTTCACACAGTTGTGA----------TCATTAAACTCATACTG-CTTTCTGCTCTACA--TTT-TTCAGTTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397652 119 + 8899380 TAGCACAAACCTGCC-TGTTAATCTGTAGTCACTT-CTCATCCTTGTCAGTATGTGTGGAGCATTTCACACAGTTGTGA----------TCATTAAACTCATACTG-CTTTCTGCGCTGCA--TTT-TTCAGTTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1606916 112 - 2680843 CAGCACAAACCTGTC-TGTTAACCTGTAGTCACTT-CTCATCC-------TATGTGTGGAGCATTTCACACAGTTGTGA----------TCATTAAACTCATACTG-CTTTCTGCTCTACA--TTT-TTCAATTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 355776 119 - 4471408 CAGCACAAACCTGTC-TGTTAACCTGTAGTCACTT-CTCATCCTTGTCAGTATGTGTGGAGCATTTCACACAATTGTGA----------TCATTAAACTCATACTT-CTTTCTCCTCTACA--TTT-TTCAATTA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 570022 119 + 2501019 GAACAC-AGCCTGTC-TGTTACCCTGTTGTCACTT-CTGATCTTTGTCAATATGTATTAAACATTTCACATAATTATAA----------TCATTAAACTCATACTG-TGTTGTCCTCTGCA--TGCATTCAGTTA i proCoq1.NW_012149263v1 I 4 I 4 s mm10.chr7 111086047 127 - 145441459 GAGCACAAGCC-----TGTTACTCTGTAGTCACTT-CTGTTTTTTTTGTCTGTATATTACAAAATTCATATAACTATTCAATTTGTACTTCATGAAATTAATCCTG-CTTTGTTTTCTGCATGTTT-TTAAGTTA i mm10.chr7 I 4 I 5 s canFam3.chr1 4606964 109 - 122678785 GAACAC-AACCTGTC-TGTTGCTGTGTAGTCACTTTCTGATCTTTGTCACTAT----------TTTCACATAATTATAA----------TCATTGAATTCATATTC-CTTTGTGCTCTGTT--TCT-GTTAACTC i canFam3.chr1 I 4 C 0 s dasNov3.JH563638 311709 104 + 643850 ----------------CACAAATCTGTAGTCATGT-CTAATCTTTGTCAGTGTATATTAAACATTTCACATAATTAAGC----------TCATTGAATTCATACTT-TTTTGTGCTCTGCT--TTT-TTCAATTT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3951900 163 - 30143674 I e otoGar3.GL873654 5471968 1414 + 5549422 I a score=321010.000000 s hg38.chr19_GL383574v1_alt 66349 43 + 155864 ----ACATCAAATATTCTTCC----------------TCT--G-TTTTT-TTCTTGTTAGTCA-T---TTT s panTro5.chr19 36134942 43 + 61309027 ----ACATCAAATATTCTTCC----------------TCT--G-TTTTT-TTCTTGTTAGTCA-T---TTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39881160 43 + 64411610 ----ACATCAAATATTCTTCC----------------TCT--G-TTTTT-TTCTTGTTAGTCA-T---TTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298745 43 - 8369475 ----ACATCAAATATTCTTCC----------------TCT--G-TTTTT-TTCTTGTTAGTCA-T---TTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63891059 44 - 106955855 ----ACATCAAATATTCTTCC----------------TCT--GTTTTTT-TTCTTGTTAGTCA-T---TTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30203118 55 + 53671032 ----ACATCAAATATTCTTCCCTCTGG-----tttttttt--t-ttttt-ttcttgttagtcatt---ttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656832 55 + 59248254 ----ACATCAAATATTCTTCCCTCTGG-----tttttttt--t-ttttt-ttcttgttagtcatt---ttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4523022 60 - 13342542 ----ACATCAAATATTCTTCCCTCTGGttttttttttttt--t-ttttt-ttcttgttagtcatt---ttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453576 57 + 7714307 ----ACATCAAATATTCTTCCCTCtgt-----tttgttttggt-ttttt-ttcttgttagtcatt---ttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265519 53 + 50890351 ----ACCTCAAATATTCTTCCCTCTG-------ttttttt--t-ttttt-ttcttgttagtcatt---ttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884714 57 - 2385121 ----ACATCAAATATTCTTCCCTCTGG---tttttttttt--t-ttttt-ttcttgttagtcatt---ttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320241 48 + 4274983 ----ACATCAAATACTCTTCTCTCTGT------------T--T-TTTTT-TTCTTGTTAGTCATT---TTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554311 44 + 49145316 ----ACATAAAATATTCTTCCTG---------------GG--T-TTTTT-TTCTTGTTAGTCA-T---TTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397771 49 + 8899380 ----ACATAAAATATTCTTCCTGTTTT----------TTT--T-TTTTT-TTCTTGTTAGTCA-T---TTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1607028 44 - 2680843 ----ACATAAAATATTCTTCCTG---------------GT--T-TTTTT-TTCTTGTTAGTCA-T---TTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 355895 43 - 4471408 ----ACATAAAATAATCTTCCTG----------------G--T-TTTTT-TTCTTGTTAGTCA-T---TTC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 570145 43 + 2501019 ----ACATCAAATACTACTCC----------------TCT--T-TTGTT-TTTTTCTTAGCCA-T---TCC i proCoq1.NW_012149263v1 I 4 C 0 s otoGar3.GL873654 5473382 43 + 5549422 ----ATATCACATACTG--------------------TCC--T-GTGTTATTTTTCTTAACCA-CCAGTCC i otoGar3.GL873654 I 1414 C 0 s mm10.chr7 111086179 47 - 145441459 ----ACACCAAGAACTACTCCAGATTC----------TGG--G-TTATT-TTACTCTTAGACA-C---A-- i mm10.chr7 I 5 C 0 s canFam3.chr1 4607073 50 - 122678785 ----ACATTAACTACTGTTCCATATTCC---------TCT--T-TTATT-TTTTTCTTAACTC-T---TCC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 311813 58 + 643850 ACTTACATCAAATCTTTTTCCATTCTT-----CTCTTCTG--G-TTTTT-CACTTCTTAGCTA-T---TCC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3951900 163 - 30143674 I a score=1006002.000000 s hg38.chr19_GL383574v1_alt 66392 64 + 155864 TCTTGTGTTGGATATTTGGGTTCCCACGTTTTTCACTATAAATTATGCTG-C-TTTGTATTGCTTT s panTro5.chr19 36134985 64 + 61309027 TCTTGTGTTGGATATTTGGGTTCCCACGTTTGTCACTATAAATTATGCTG-C-TTTGTATTGCTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39881203 64 + 64411610 TCTTGTGTTGGATATTTGGGTTCCCACGTTTGTCACTATAAATTATGCTG-C-TTTGTATTGCTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298788 64 - 8369475 TCTTGTGTTGGATATTTGGGTTCCCACGTTTTTCACTATAAATTATGCTG-C-TTTGTATTGCTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63891103 64 - 106955855 TCTTGTGTTGGATATTTGGGTTCCCACGTTTTTCACTATAAATTATGCTA-T-TTTCTATTGCCTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30203173 64 + 53671032 tcttGTGTTGGATATTTGGGTTCCCACATTTTTCACTATAAATTATGCTG-C-TTTGTATTGCTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656887 64 + 59248254 tcttGTGTTGGATATTTGGGTTCCCACATTTTTCACTATAAATTATGCTG-C-TTTGTATTGCTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4523082 64 - 13342542 tcttGTGTTGGATATTTGGGTTCCCACATTTTTCACTATAAATTATGCTG-C-TTTGTATTGCTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453633 64 + 7714307 tcttgtgttGGATATTTGGGTTCCCACGTTTTTCACTATAAATTATGCTG-C-TTTGTATTGCTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265572 64 + 50890351 tgttGTGTTGGATATTTGGGTTCCCACGTTTTTCACTATAAATTATGCTG-C-TTTGTATTGCTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884771 64 - 2385121 tcttGTGTTGGATATTTGGGTTCCCACGTTTTTCACTATAAATTATGCTG-C-TTTGTATTGCTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320289 64 + 4274983 TCTTGTGTTGGATATTTGAGTTCCCACGTTTTTCACTATAAATTATGCTG-C-TTTGTATTGCTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554355 64 + 49145316 TCTTGTGTTGGATATTTGGGTTCCCACGTTTTTCACTATAAATTATGCTA-C-TTTGTATTGCTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397820 64 + 8899380 TCTTGTGTTCGATATTTGGGTTCCCATATTTTTCACTATAAATTATGCTA-C-TTTGTATTGCTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1607072 59 - 2680843 TCTTG-----GATATTTGGGTTCCCACGTTTTTCACTATAAATTATGCTA-C-TTTGTATTGCTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 355938 64 - 4471408 TCTTGTATTGGATATTTGGGTTCCCACGTTTTTCACTATAAATTATGCTA-C-TTTGTATTGCTTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3952063 62 - 30143674 TCTTGTGTTGG-TATTTGGGTTCCCAAGTTT-TCCCTATAAATTGTGCTA-C-TTTGTATTGCTTT i micMur3.chr22 I 163 C 0 s proCoq1.NW_012149263v1 570188 62 + 2501019 TCTTGTGTTGG-TATTTGGGTTCCCAAGTTT-TCACTATAAATTATGCTA-C-TTTATATTGCTTT i proCoq1.NW_012149263v1 C 0 I 61 s otoGar3.GL873654 5473425 53 + 5549422 TCCCATGCTGGATATTTGACGTCCAGAGTTT-CCAGTATAAATTGTGTTG-C-TTG---------- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111086226 61 - 145441459 -CATGTGTTGGATATGTGGGGTCACAAGTTT-TCACTATGAATTTTTCTA-C-TTTATGCTGTTT- i mm10.chr7 C 0 C 0 s canFam3.chr1 4607123 64 - 122678785 TCTTGTGTTGGGTATTTAGGTTCTTGAGTTT-TCACTGTAATATATGCTATC-TTGGTATTCCATT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 311871 64 + 643850 TCTTCTTTTGGATATTTGGGTTCTCAGGTTT-TCACCATAAATTATGCTA-CATTGGTATTGCTTT i dasNov3.JH563638 C 0 C 0 a score=34580.000000 s hg38.chr19_GL383574v1_alt 66456 2 + 155864 AT s panTro5.chr19 36135049 2 + 61309027 AT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39881267 2 + 64411610 AT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298852 2 - 8369475 AT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63891167 2 - 106955855 AT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30203237 2 + 53671032 AT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656951 2 + 59248254 AT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4523146 2 - 13342542 AT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453697 2 + 7714307 AT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265636 2 + 50890351 AT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884835 2 - 2385121 AT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320353 2 + 4274983 AT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554419 2 + 49145316 AT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1607131 2 - 2680843 AT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 356002 2 - 4471408 AT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3952125 2 - 30143674 AT i micMur3.chr22 C 0 I 4847 s otoGar3.GL873654 5473478 2 + 5549422 AT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111086287 2 - 145441459 AT i mm10.chr7 C 0 C 0 s canFam3.chr1 4607187 2 - 122678785 AT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 311935 2 + 643850 AT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 570250 61 + 2501019 I e saiBol1.JH378197 5397884 0 + 8899380 C a score=584743.000000 s hg38.chr19_GL383574v1_alt 66458 57 + 155864 CATGTCTCTTATGATTGGCTGAAATT---TTA-CTGTGTTATAGAGGAGAGAGAATGTGTA s panTro5.chr19 36135051 57 + 61309027 CATGTCTCTTATGATTGGCTGAAATT---TTA-CTGTTTTATAGAGGAGAGAGAATGTGTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39881269 57 + 64411610 CATGTCTCTTATGATTGGCTGAAATT---TTA-CTGTTTTATAGAGGAGAGAGAATGTGTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298854 57 - 8369475 CATGTCTCTTATGATTGGCTGAAATT---TTA-CTGTGTTATAGAGGAGAGAGAATGTGTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63891169 57 - 106955855 CATGTCTCTTATGATTGGCTGAAATT---TTA-CTGTGTTATAGAGGAGAGAGAATATATA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30203239 57 + 53671032 GATGTCTCATATGATTGGCTGAAATT---TTA-CTGTGTTATAGAGGAGAGAGAATGTATA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34656953 57 + 59248254 GATGTCTCATATGATTGGCTGAAATT---TTA-CTGTGTTATAGAGGAGAGAGAATGTATA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4523148 57 - 13342542 GATGTCTCATATGATTGGCTGAAATT---TTA-CTGTGTTATAGAGGAGAGAGAATGTATA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453699 57 + 7714307 GATGTCTCATATGATTGGCTGAAATT---TTA-CTGTGTTATAGAGGAGAGAGAATGTATA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265638 55 + 50890351 GATGTCTC--ATGATTGGCTGAAATT---TTA-CTGTGTTATAGAGGAGAGAGAATGTATA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884837 57 - 2385121 GATGTCTCATATGATTGGCTGAAATT---TTA-CTGTGTTATAGAGGAGAGAGAATGTGTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320355 57 + 4274983 GATGTCTCATATGATTGGCTGAAATT---TTA-CTGTGTTATAGAGGAGAGAGAATGTATA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554421 55 + 49145316 CATGTCTCATATAATTAGCTGAAATC---TTA-TTATGTTATAGAG--AAGAGAATATATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397884 55 + 8899380 -ATGCCTCATATAATTGGCTGAAATC---TTACTTATGTTATAGAG--AAGAGAATATATA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1607133 55 - 2680843 CATGTCTCATATAATTGGCTGAAATC---TTA-CTATGTTATAGAG--AAGAGAATATATA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 356004 55 - 4471408 CATGTCTTATATAATTGGCTGAAATC---TTA-CTATGTTATAGAG--AAGAGAATATATA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5473480 49 + 5549422 TATATTTTGTGTGACTGGCTAAAATC---ATG-TTATTAT--------AAGAGAATACACT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111086289 57 - 145441459 TATATCTCAGATGATTGGCTGGAATC---CTG-TGGTGGTGTTATAGAAAGAGAACACATA i mm10.chr7 C 0 C 0 s canFam3.chr1 4607189 42 - 122678785 CGTACTTCATAT---------AAATT---TTG-TTA--GCATAGTAGAGAAAGGATA---- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 311937 59 + 643850 CAAAGTTCATACAATTGACTTAAATCCTGTTA-TTGTGTTATATTGTAAAGGGAGAG-ATA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 570250 61 + 2501019 I e micMur3.chr22 3952127 4847 - 30143674 I a score=901598.000000 s hg38.chr19_GL383574v1_alt 66515 69 + 155864 GATACAGGAAGGCTTGAATAATATAGAGCCATCTGGAGAGA-CACAGTAAAGATGGAGTAGGAAGTGTTT- s panTro5.chr19 36135108 69 + 61309027 GATACAGGAAGGCTTGAATAATATAGAGCCATCTGGAGAGA-CACAGTAAAGATGGAGTAGGAAGTGTTT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39881326 69 + 64411610 GATACAGGAAGGCTTGAATAATATAGAGCCATCTGGAGAGA-CACAGTAAAGATGGAGTAGGAAGTGTTT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298911 69 - 8369475 GATACAGGAAGGCTTGAATAATATAGAGCCATCTGGAGAGA-CACAGTAAAGATGGAGTAGGAAGTGTTT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63891226 69 - 106955855 GATACAGGAAGGCTTGAATAATATAGAGCCATCTAGAGAGA-CACAGTAAAGATGGAGTAGGAAGTGTTC- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30203296 69 + 53671032 GATACAGGAAGGCTTGAATAATGTGGAGCCATCTAGAGAGA-CACAGTAAAGATGGAGTAGGAAGTGTTC- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34657010 69 + 59248254 GATACAGGAAGGCTTGAATAATGTGGAGCCATCTAGAGAGA-CACAGTAAAGATGGAGTAGGAAGTGTTC- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4523205 69 - 13342542 GATACAGGAAGGCTTGAATAATGTGGAGCCATCTAGAGAGA-CACAGTAAAGATGGAGTAGGAAGTGTTC- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453756 69 + 7714307 GATACAGGAAGGCTTGAATAATGTGGAGCCATCTAGAGAGA-CATAGTAAAGACGGAGTAGGAAGTGTTC- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265693 69 + 50890351 GATACAGGAAGGCTTGAATAATGTGGAGCCATCTAGAGAGA-CACAGTAAAGATGGAGTAGGAAGTGTTC- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884894 69 - 2385121 GATACAGGAAGGCTTGAATAATGTGGAGCCATCTAGAGAGA-CACAGTAAAGATGGAGTAGGAAGTGTTG- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320412 69 + 4274983 GATACAGGAAGGCTTGAATAATGTGGAGCCATCTAGAGAGA-CACAGTAAACATGGAGTAGGAAGTGTTC- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554476 69 + 49145316 GATACAAGAAGGCTTGAATAATGTTGAACCATCTAGAGGGA-GACAGTAAAGATGGAGTAGGAAGTGTTT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5397939 69 + 8899380 GATACAAGAAGGCTTGAATAATGTAGAACCATCTAGAGGGA-GACATTAAAGATGGAGTAGGAAGTGTTT- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1607188 50 - 2680843 GATAC---AAGGCTTGAATAATGTAAAACCATCTAGAGGGA-GACAGTAAAGA----------------T- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 356059 69 - 4471408 GATACAAGAAGGCTTGAATAATGTAGAACCTTCTAGAGGGA-GACAGTAAAGATGGAGTAGGAAGTGTTT- i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 570311 69 + 2501019 GATACAGGAAGGCTTGAATGATGTAGTGCGATTTAGAGGGA-GACAGTAAAGGTGAACTAGGAAGTGTTT- i proCoq1.NW_012149263v1 I 61 I 34 s otoGar3.GL873654 5473529 67 + 5549422 GATACAAGCAGACTCCCCACAACTAGTGCAGTTCAGAGGGA-GACAGTCAAGATGG--TGGAAAGTGTTC- i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111086346 61 - 145441459 GATTCAGGAA--CCTGAAT-ACATGGAACCAGGTAGAGGGA-AAAACTGAA-----AGCAGGAAGTTCTT- i mm10.chr7 C 0 C 0 s canFam3.chr1 4607231 69 - 122678785 GATACAGGAAAACTTGAATAATATGAAGCCATGTAGAGGGT-GACAAGAAAGGTGAAAGAGGAAGTGGTT- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 311996 71 + 643850 GGGACAGGAAGACTTGAATATTATGGAGCTATTTTAGGGGATGACAGTAAAGGTGGAATAATAAATTGTTT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3952127 4847 - 30143674 I a score=353439.000000 s hg38.chr19_GL383574v1_alt 66584 34 + 155864 TGAGTCAGTAAGGATTG---GTGCTTGTCTGTTTTTT- s panTro5.chr19 36135177 34 + 61309027 TGAGTCAGTAAGGATTG---GTGCTTGTCTGTTTTTT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39881395 34 + 64411610 TGAGTCAGTAAGGATTG---GTGCTTGTCTGTTTTTT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6298980 34 - 8369475 TGAGTCAGTAAGGATTG---GTGCTTGTCTGTTTTTT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63891295 34 - 106955855 GGAGTCAGTAAGGATTG---GTGCTTGTCTGTTTTTT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30203365 33 + 53671032 GGAGTCAGTAAGGATTG---GTGCTTGTTTG-TTTTT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34657079 33 + 59248254 GGAGTCAGTAAGGATTG---GTGCTTGTTTG-TTTTT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4523274 33 - 13342542 GGAGTCAGTAAGGATTG---GTGCTTGTTTG-TTTTT- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453825 34 + 7714307 GGAGTCAGTAAGGATTG---GTGCTTGTTTGTTTTTT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265762 34 + 50890351 GGAGTCAGTAAGGATTG---GTGCTTGTCTGTTTTTT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884963 34 - 2385121 GGAGTCAGTAAGGATTG---GTGCTTGTTTGTTTTTT- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320481 34 + 4274983 GGAGTCAGTAAGGATTG---TTGCTTGTCTGTTTTTT- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554545 32 + 49145316 GGAGTCACTAAGGATTG---GTACTTGTC--TTTTTT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5398008 34 + 8899380 GGAGTCAGTAGGGCTTG---GTACTTGTCTGTTTTTT- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1607238 34 - 2680843 GGAGTCACTAAGGAAGG---GTACTTGTCTGTTTTTT- i cebCap1.NW_016107633v1 C 0 I 2 s aotNan1.NW_018505377v1 356128 34 - 4471408 GGAGTCACTAAGGATTG---GTACTTGTCTGTTTTTT- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5473597 30 + 5549422 GAGTTCAGGAAGAACT-------TCGGTCTGTTGTTG- i otoGar3.GL873654 I 1 I 1 s mm10.chr7 111086407 34 - 145441459 AGAGCCAGTAAGGACTG---GTGCTTCTCTGTTGTTT- i mm10.chr7 C 0 I 1 s canFam3.chr1 4607300 33 - 122678785 GGAGTGGTTGAGACCTGGCAGTGCTTTTGTGTT----- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 312067 33 + 643850 GGAATCAGTGAGACCTG---GTTCT--TCTGTTTTTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 570380 34 + 2501019 I e micMur3.chr22 3952127 4847 - 30143674 I a score=586550.000000 s hg38.chr19_GL383574v1_alt 66618 42 + 155864 ATCTGTGATGTGGAAATAACACCTATTT-TCTTGCAATTTGTG s panTro5.chr19 36135211 42 + 61309027 ATCTGTGATGTGGAAATAACACCTATTT-TCTTGCAATTTGTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39881429 42 + 64411610 ATCTGTGATGTGGAAATAACACCTATTT-TCTTGCAATTTGTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6299014 42 - 8369475 ATCTGTGATGTGGAAATAACACCTATTT-TCTTGCAATTTGTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63891329 42 - 106955855 ATCTGTGATGTGGAAATAACACCTATTT-TCTTGCAATTTGTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30203398 42 + 53671032 ATCTGTGATGTGGAAATAACACCTATTT-TCTTGAAATTTGTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34657112 42 + 59248254 ATCTGTGATGTGGAAATAACACCTATTT-TCTTGAAATTTGTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4523307 42 - 13342542 ATCTGTGATGTGGAAATAACACCTATTT-TCTTGAAATTTGTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453859 42 + 7714307 ATCTGTGATGTGGAAATAACACCTATTT-TCTTGACATTTGTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265796 42 + 50890351 ATCTGTGATGTGGAAATAACACCTATTT-TCTTGAAATTTGTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 884997 42 - 2385121 ATCTGTGATGTGGAAATAACACCTATTT-TCTTGAAATTTGTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320515 42 + 4274983 ATCTGTGATGTGGAAATAACACCTATTT-TCTTGAAATTTGTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554577 42 + 49145316 ATTTGTGATGTGGAAATAACACCTATTT-TCTTGCAATTTGTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5398042 42 + 8899380 ATTTGTGATGTGGAAATAGCACCTATTT-TCTTGCAGTTTGTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1607274 42 - 2680843 ATCTGTGATATGGAAATAACACCTATTT-TCTTGCAATTTGTG i cebCap1.NW_016107633v1 I 2 C 0 s aotNan1.NW_018505377v1 356162 42 - 4471408 ATCTGTGATGCGGAAATAACACCTATTT-TCTTGCAATTTGTG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 570414 42 + 2501019 ATCCGTGATGTGGAAATAACACCTCCTC-TCTTGCGATTTGTG i proCoq1.NW_012149263v1 I 34 I 153 s otoGar3.GL873654 5473628 39 + 5549422 ATC--TGATGTGGAAATAACACCTCCTG-CCTCACAATTTGT- i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111086442 41 - 145441459 ATC--TGAATTGTAAGAAACACCTCCCTACCTTGCTGTCTGTG i mm10.chr7 I 1 C 0 s canFam3.chr1 4607333 17 - 122678785 ATCTGTGAT--------------------------AATGTGTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 312100 42 + 643850 ATCTGTGATATGAAAATATCACCTCTTT-CCTTGCAATTTGTG i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3952127 4847 - 30143674 I a score=1402392.000000 s hg38.chr19_GL383574v1_alt 66660 121 + 155864 CCGATTAGTG--------TTTA-----TTT---TTCTTACTATAAATCTTGGTTCCTGTTATTCTTTCCATAAAAGGCTTTCTACATTttgagaacccactgtgtgtctggcacttca---gtttgccggtgttggggat s panTro5.chr19 36135253 121 + 61309027 CCGATTAGTG--------TTTG-----TTT---TTCTTACTATAAATCTTGGTTCCTGTTATTCTTTCCATAAAAGGCTTTCTACATTttgagaacccactgtgtgtctggcacttca---gtttgccggtgttggggat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39881471 121 + 64411610 CCGATTAGTG--------TTTG-----TTT---TTCTTACTATAAATCTTGGTTCCTGTTATTCTTTCCATAAAAGGCTTTCTACATTttgagaacccactgtgtgtctggcacttca---gtttgccggtgttggggat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6299056 121 - 8369475 CCGATTAGTG--------TTTA-----TTT---TTCTTACTATAAATCTTGGTTCCTGTTATTCTTTCCATAAAAGGCTTTCTACATTttgagaacccactgtgtgtctggcacttca---gtttgccggtgttggggat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63891371 121 - 106955855 CCGATTAGTG--------TTTA-----TTT---TTCTTACTATAAATCTTGGTTCCTGTTATTCTTTCCATAAAAGGCTTTCTGCATTttgagaatccactatgtgtctggcacttca---gtttgccggtgttggggat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30203440 121 + 53671032 CCAGTTAGTG--------TTTA-----TTT---TTCTTACTATAAATCTTGGTTCCTGTTATTCTTTCCATAAAAGGTTTTCTACATTttgagaacccactatgtgtctggcacttca---gtgtgccggtgttggggat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34657154 121 + 59248254 CCAGTTAGTG--------TTTA-----TTT---TTCTTACTATAAATCTTGGTTCCTGTTATTCTTTCCATAAAAGGTTTTCTACATTttgagaacccactatgtgtctggcacttca---gtgtgccggtgttggggat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4523349 121 - 13342542 CCAGTTAGTG--------TTTA-----TTT---TTCTTACTATAAATCTTGGTTCCTGttattctttccataaaaggttttctacattttgagaacccactatgtgtctggcacttca---gtgtgccggtgttggggat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5453901 121 + 7714307 CCAGTTAGTG--------TTTA-----TTT---TTCTGACTATAAATCTTGGTTCCTGttattctttccataaaaggttttctacattttgagaacccactatgtgtctggcacttca---gtttgccggtgttggggat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265838 120 + 50890351 CCAGTTAGTG--------TTTA-----TTT---TTCTTACTATAAATCTTGGTTCCTGTTATTCTTTCCATAAAAGGTTTTCTACATCttgagaacccactatgtg-ctggcacttca---gtttgccggtgttggagat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 885039 121 - 2385121 CCAGTTAGTG--------TTTA-----TTT---TTCTTACTATAAATCTTGGTTCCTGGTATTCTTTCCATAAAAGGTTTTCTACATTTTGAGAACCCactatgtgtctggcacttca---ttttgccggtgttggggat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320557 121 + 4274983 CCAGTTAGTG--------TTTA-----TTT---TTCTTACTGTAAATCTTGGTTCCatttattctttccataaaaggctttctacattttgagaacccactatgtgtctggcacttaa---gtttgccagtgttggggat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554619 125 + 49145316 CCAATTAGTG---TTCG-TTTA-----TTT---TTCTTACTAAAAATCTTGCTTTCTGTTATTCTTTTCATCAAAGACTTTCTatattttgagaaccaactatgtgtctggcacttca---gtttgcaggtgttggggat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5398084 126 + 8899380 CCAATTAGTG---TTTGTTTTA-----TTT---TTCATACTATAAATCTTGCTTTCTGTTATTCTTTCCATCAAAGGCTTTCtatgttttgagaaccaactccatgtctggcacttca---gtttgcaggtgttggggat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1607316 124 - 2680843 CCAATTAGTG---TTCG-TTTA-----TTT---TTCTTACTATAAATCTTGATTTCTGTTATTCTTTCCATCAAAGGCTTTCTatattttgagaaccaactatgtgtctggcactt-a---gtttgcaggtgttggggat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 356204 124 - 4471408 CCAATTAGTG---TTTG-TTTA-----TTT---TTCTTACTATAAATCTTGG-TTCTGTTATTCTTTCCATCAAAGGCTTTCTGTATTttgagaaccagctatgtgtctggcacttca---gtttgcaggtgttggggat i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5473667 99 + 5549422 --GACTAGTC--------TTTATGTACTTT---TTTTTGCTGTAAATA--------------------CATAAAAGGCTTTCTAAATTttgaaaacccactatgtacctggcacat--------tgtaggtattggtgta i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111086483 88 - 145441459 CTGATTAGTG--------TTCA-----CTTACATTTTTATTGTACATCTTGTTTCCTGTTACCCATTCCACAAAGAAC-----------------------------CTGGCACTTGG---GTTTGAGGGAAT------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4607350 115 - 122678785 CTTATTAGTAGTATTTG-TTTA------TT---TTCTTATTATAAATCTTAGTTACTGTGAGCCTTT-CAAAGAAGATTTCCTAAATTttgagaacccactatgtgtttgacactt--------tgtaggaatt------ i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 312142 128 + 643850 CTAATTAGTG---TTCTTTTTT-----TTT---TTCTTACTATGAATTTTGGTTTCTGTGATTCGTTCCATAAAA-CCTTCCTAAATTttgagaacccactctgtgtcaggaactttgtacgtacttaggtattaggaat i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 570456 153 + 2501019 I e micMur3.chr22 3952127 4847 - 30143674 I a score=2102313.000000 s hg38.chr19_GL383574v1_alt 66781 147 + 155864 atagcagtaaggaaaacaaagcccctgacctcaaggagcat-acattaatttagtgCAGAAGCCTCCACACTTG------CCTGGCTGTATACTCTGTCAGTAACACATGT--GAGTGTGGACTCCATAAA------TACAAATGTT-TAGAAATTTTGTGTG s panTro5.chr19 36135374 147 + 61309027 atagcagtaaggaaaacaaagcccctgccctcaaggagcat-acattaatttagtgCAGAAGCCTCCACACTTG------CCTGGCTGTATACTCTGTCAGTAACACATGT--GAGTGTGGACTCCATAAA------TACAAATGTT-TAGAAATTTTGTGTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39881592 147 + 64411610 atagcagtaaggaaaacaaagcccctgccctcaaggagcat-acattaatttagtgCAGAAGCCTCCACACTTG------CCTGGCTGTATACTCTGTCAGTAACACATGT--GAGTGTGGACTCCATAAA------TACAAATGTT-TAGAAATTTTGTGTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6299177 147 - 8369475 atagcagtaaggaaaacaaagcccctgccctcaaggagcat-acattaatttagtgCAGAAGCCTCCACACTTG------CCTGGCTGTATACTCTGTCAGTAACACATGT--GAGTGTGGACTCCATAAA------TAGAAATGTT-TAGAAATTTTGTGTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63891492 147 - 106955855 atagcagtaaggaaaacaaagcccctgccctcaaggagcat-acattaatttagtgCAGAAGTCTCCACACTTG------CCTGGCTATATACTCTGTCAGTAACACATGT--GAGTGTGGACTCCATAAA------TACAAATGTT-TAGAAATTTTATGTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30203561 147 + 53671032 atagcagtaaagaaaacaatgcccctgccctcaaggagcat-atattaatttagtgCAGAAGTCTCCACACTTG------CCTGACTGTATACTGTGTCAGTAACACGCGT--GAGTGTGGACCCCATAAA------TACAAATGTT-TAGAAATTTTGTGTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34657275 147 + 59248254 atagcagtaaagaaaacaatgcccctgccctcaaggagcat-atattaatttagtgCAGAAGTCTCCACACTTG------CCTGACTGTATACTCTGTCAGTAACACGCGT--GAGTGTGGACTCCATAAA------TACAAATGTT-TAGAAATTTTGTGTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4523470 147 - 13342542 atagcagtaaagaaaacaatgcccctgccctcaaggagcat-atattaatttagggcagaagtctccacacttg------CCTGACTGTATACTCTGTCAGTAACACGCGT--GAGTGTGGACTCCATAAA------TACAAATGTT-TAGAAATTTTGTGTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5454022 147 + 7714307 atagcagtagagaaaacaatgcccctgccctcaaggagcat-atattaatttagtgCAGAAGTCTCCACACTTG------CCTGACTGTATACTCTGTCGGTAACACGCGT--GAGTGTGGACTCCATAAA------TACAAATGTT-TAGAAATTTTGTGTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29265958 147 + 50890351 atagcagtaaagaaaacaatgcccctgccctcaaggagcat-atattaatttagtgCAGAAGTCTCCACACTTG------CCTGACTGTATACTCTGTCAGTAACACGCGT--GAGTGTGGACTCCATAAA------TACAAATGTT-TAGAAATTTTGTGTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 885160 147 - 2385121 atagcagtagagaaaacaatgcccctgccctcaaggagcat-atattaatttagtgcggAAGTCTCCACACTTG------CCTGACTGTATACTCTGTCAGTAACACGCGT--GAGTGTGGACTCCATAAA------TACAAATGTT-TAGAAATTTTGTGTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320678 141 + 4274983 atagcagtaaagaaaacaatgcccctgccctcaaggagcat-acattaatttagtgCAGAAGTCTCCACACTTG------CCTGACTGTATACTCTGTCAGTAACA--CGT--GAGTGTGGACTCC----A------TACAGATGTT-TAGAAATTTTGTGTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554744 147 + 49145316 attgcagtaaggaaaacaaagcccctgccctcaaggagcat-acattaatttagtgCAGAAGTCTCCACACTTG------CCTGGCTGTATACTCTGTCAGTAACACATGT--GAGTGTGGACTCCATAAA------TACAAATGTT-TAGAAATTTTGTGTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5398210 147 + 8899380 atagcaggaaggaaaacaaagcccctgccctcaaggagcat-acattaatttagtgCAAAAATGTCCACACTTG------CCTGGCTGTATACTCTGTCAGTAACACATGT--GAGTGTGGACTCCATAAA------TACAAATGTT-TAGAAATTTTGTGTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1607440 147 - 2680843 atagcagtaaggaaaacaaagcctctgccctcaaggagcat-acattaatttagtgCAGAAGTCTCCACACTTG------CCTGGCTGTATACTCTGTCAGTAACACATGT--GAGTGTGGACTCCATAAA------TACAAATGTT-TAGAAATTTTGTGTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 356328 147 - 4471408 atagcagtaaggaaaacgaagcccctgccctcaaggagcat-acattaatttagtgCAGAAGTCTCCACACTTG------CCTGGCTGTATACTCTATCAGTAACACATGT--GAGTGTGGACTCCATAAA------TACAAATGTT-TAGAAATTTTGTGTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3956974 131 - 30143674 ATAGCAataaggaaaacaaagcccctgccctcaaggaacgc-acatcagtttaatgcagaagTCTCCAAACTTG------TTTGATTGTATACTAT-----------------GAGTGTGGGC-CCATAAA------TATAAATGTT-TATGAATTTTGTGTG i micMur3.chr22 I 4847 C 0 s proCoq1.NW_012149263v1 570609 131 + 2501019 atagcagtaaggaaaacaaagcccctgccctcacggaacat-acatCAGTTTAATGCAGAAGTCTCCATACTTG------TTCGATTGTATACTAT-----------------GAGTGTGGGC-CCATAAA------TATAAATGTT-TATAAATTTTGTGTG i proCoq1.NW_012149263v1 I 153 I 4438 s otoGar3.GL873654 5473766 127 + 5549422 atagca------agaacaaagcccctgccctcaaggaacac-acgtcagtttagtgCCGCAGGGT------------------GATTGTTTACTGT--CAGTAACACATGTGGGTGTGTGGGC-CCATGAA------TATGAATGTT-CATAAACTTTGCAT- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111086571 133 - 145441459 AGGGCAGAAAGAAGAACAGAG-------CTTTCTAGAGCCT-GGGTAAATATAGTGGAGAAGGCCTCAAATCTG-------TTGATTATACA-TCTAT------------T--TGTTGTGCTCTTCATAAAAACAACTATAAAAGTTATATTAAAGTTACATA i mm10.chr7 C 0 I 7 s canFam3.chr1 4607465 141 - 122678785 agaactataagcagaacagagccctt-ccctcaaggagTATGACAATAATTTACTACAGAAGTCTCCGAAATAGTTTGGTTTTGGTTGTGCACGCTG--AATAACATGTAT--GAGTGTGGACCCCATAAA-----------------TATAAATTTCATGCG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 312270 134 + 643850 attgtactaaggagaacaaagcctttgccctcaaagagcAA-A-------TTAATGCAGAAGTTTCCAAACTTG------TTTG------TGCACTGTCAGTAACACATTT--ATGAGTAGACCCTACATG------TATAAATGTT-TATAAATTTTAAGTG i dasNov3.JH563638 C 0 C 0 a score=547447.000000 s hg38.chr19_GL383574v1_alt 66928 40 + 155864 Agctatt----ctcagtc---tacatattaaatattagtgaaactta s panTro5.chr19 36135521 40 + 61309027 AGCTATT----CTCAGTC---TACATATTAAATATTAGTGAAACTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39881739 40 + 64411610 AGCTATT----CTCAGTC---TACATATTAAATATTAGTGAAACTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6299324 40 - 8369475 AGCTATT----CTCAGTC---TACATATTAAATATTAGTGAAACTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63891639 40 - 106955855 AGCTATT----CTCAGCC---TACATATTAAATATTAGTGAAACTTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30203708 40 + 53671032 AGCTATT----CTCAGTC---TACATAGTAAATATTAGTGAAACTTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34657422 40 + 59248254 AGCTATT----CTCAGTC---TACATAGTAAATATTAGTGAAACTTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4523617 40 - 13342542 AGCTATT----CTCAGTC---TACATAGTAAATATTAGTGAAACTTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5454169 40 + 7714307 AGCTATT----CTCAGTC---TACATAGTAAATATTAGTGAAACTTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29266105 40 + 50890351 Agctatt----ctcagtc---tacatagtaaatattagtgaaactta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 885307 40 - 2385121 AGCTATT----CTCAGTC---TACATAGTAAATATTAGTGAAACTTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320819 40 + 4274983 AGCTATT----CTCAATC---TACATCGTAAATATTAGTGAAACTTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554891 40 + 49145316 AGGTATT----CTCAGTC---TACATACTAAATTTTAGTGAAACtta i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5398357 40 + 8899380 AGGTATT----CTCATTC---TACATACTAAATTTTAGTGAAACtta i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1607587 37 - 2680843 AGATATT----CTCAGTC---TACATACTAAATTTTAGTGAAAC--- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 356475 40 - 4471408 AGGTATT----CTCAGTC---TACATACTAAATTTTAGTGAAACTTA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3957105 38 - 30143674 --CTATT----CTCACTC---CATGTACTAAATGTTAATAAAACTTA i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5473893 39 + 5549422 -GCTATT----CTTAGTC---TATATAGTAAATATTAGTAAAACTTA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111086711 38 - 145441459 TGCTGTT----TTTCATG---TGCATACTAACTTTTAGC--AACTTA i mm10.chr7 I 7 I 715 s canFam3.chr1 4607606 38 - 122678785 -----CA----CTCAGTCCTTTATGTATTAAGTATTAGTGaaattta i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 312404 39 + 643850 -----TTCTAGCTCAGTC---TATATGTTAACTACTAGTAAAACTTA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I a score=138918.000000 s hg38.chr19_GL383574v1_alt 66968 11 + 155864 atttttta-ttt s panTro5.chr19 36135561 11 + 61309027 ATTTTTTA-TTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39881779 11 + 64411610 ATTTTTTA-TTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6299364 11 - 8369475 ATTTTTTA-TTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63891679 12 - 106955855 ATTTTTTATTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30203748 11 + 53671032 ATTTTTTA-TTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34657462 11 + 59248254 ATTTTTTA-TTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4523657 11 - 13342542 ATTTTTTA-TTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5454209 11 + 7714307 ATTTTTTA-TTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29266145 11 + 50890351 atttttta-ttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 885347 11 - 2385121 ATTTTTTA-TTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320859 11 + 4274983 ATTTTTTA-TTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554931 11 + 49145316 atttttaa-ttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5398397 11 + 8899380 atttttaa-ttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1607624 7 - 2680843 ----TTAA-TTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 356515 11 - 4471408 ATTTTTAA-TTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3957143 11 - 30143674 ATTCTTTA-TTC i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5473932 11 + 5549422 AGTTTTTG-TTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111087464 10 - 145441459 ATTTCTTA--TT i mm10.chr7 I 715 C 0 s canFam3.chr1 4607645 11 - 122678785 ttttttta-ttt i canFam3.chr1 I 1 I 396 s dasNov3.JH563638 312443 11 + 643850 ATTTCTTT-CTT i dasNov3.JH563638 C 0 I 6 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I a score=765368.000000 s hg38.chr19_GL383574v1_alt 66979 61 + 155864 tgtat-aaaaaatacaaat--acaataaaaTATATAGAGAGACCTG-TAAGCATTTCTGTTGTTG s panTro5.chr19 36135572 61 + 61309027 TGTAT-AAAAAATACAAAT--ACAATAAAATATATAGAGAGACCTG-TAAGCATTTCTGTTATTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39881790 61 + 64411610 TGTAT-AAAAAATACAAAT--ACAATAAAATATATAGAGAGACCTG-TAAGCATTTCTGTTATTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6299375 61 - 8369475 TGTAT-AAAAAATACAAAT--ACAATAAAATATATAGAGAGACCTG-TAAGCATTTCTGTTGTTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63891691 55 - 106955855 TGTAT-AAAAAATACAAAT--ACAATAAAAT------AGAGACCTG-TAAGCATTTTTGTTGTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30203759 59 + 53671032 TGTAT-AAAAAATACAAAT--ACAATAAAATATAT--AGAGACCTG-TAAGCATTTCTGTTGTTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34657473 59 + 59248254 TGTAT-AAAAAATACAAAT--ACAATAAAATATAT--AGAGACCTG-TAAGCATTTCTGTTGTTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4523668 59 - 13342542 TGTAT-AAAAAATACAAAT--ACAATAAAATATAT--AGAGACCTG-TAAGCATTTCTGTTGTTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5454220 59 + 7714307 TGTAT-AAAAAATACAAAT--ACAATAAAATATAT--AGAGACCTG-TAAGCATTTCTGTTGTTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29266156 59 + 50890351 tgtat-aaaaaatacaaat--acaataaaaTATAT--AGAGACCTG-TAAGCATTTCTGTTGTTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 885358 59 - 2385121 TGTAT-AAAAAATACAAAT--ACAATAATATATAT--AGAGACCTG-TAAGCATTTCTGTTGTTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320870 60 + 4274983 TGTATAAAAAAATACAAAT--ACAGTAAAATATAT--AGAGACCTG-TAAGCATTTCTGTTGTTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28554942 61 + 49145316 tattt-aaaaaatacaaatagacaataaaatatat--aGAGACCTG-TAAGCATTTCCGTTGTTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5398408 57 + 8899380 tatat-aaaaaataaaaat--acaataaa--atat--aGAGACCTG-TAAGCATTTCTGTTGTTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1607631 59 - 2680843 TATAT-AAAAAATACAAAT--ACAATAAAATATAT--AGAGACCTG-TAAGCATTTCTGTTGTTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 356526 59 - 4471408 TATAT-AAAAAATACAAAT--ACAATAAAATATAT--AGAGACCTG-TAAACATTTCTGTTGTTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3957154 59 - 30143674 TA-AT-AAAAAAGACAAAT--ATAATAATGTATAT--AGAGACTTGATAAGCATTTCTATTGTTG i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5473943 54 + 5549422 T-------AAAAGACAAGT--ATAATAATGTTTAC--AAAGATTTGGTAAGCCTttttgttgttg i otoGar3.GL873654 C 0 I 627 s mm10.chr7 111087474 54 - 145441459 TGTAT--AAAAATACATCT--ATACT-GTACAAAT--AGAG---TT-TAAACATTTATGTTATAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4608052 59 - 122678785 TATAT-AAACACTACAAAG--ATAGTAATGTGTAT--AGAGACTTC-TAAGCATTTTTGTTGTTG i canFam3.chr1 I 396 C 0 s dasNov3.JH563638 312460 57 + 643850 TATCC-AAAAAATACAAAT--ATAATAA--TGTGT--AGAGATTTT-TCACCATCTTTATGTTTG i dasNov3.JH563638 I 6 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I a score=433497.000000 s hg38.chr19_GL383574v1_alt 67040 33 + 155864 ACTGTTGAATCTAAAGAGCACAATAGCAACATC s panTro5.chr19 36135633 33 + 61309027 ACTGTTGAATCTAAAGAGCACAATAGCAACATC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39881851 33 + 64411610 ACTGTTGAATCTAAAGAGCACAATAGCAACATC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6299436 33 - 8369475 ACTGTTGAATCTAAAGAGCACAATAGCAACATC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63891746 33 - 106955855 ACTGTTGAATCTAAAGAGCACAATAGCAACATC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30203818 33 + 53671032 ACTGTTGAATCTAAAGAGCACAATAGCAACATC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34657532 33 + 59248254 ACTGTTGAATCTAAAGAGCACAATAGCAACATC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4523727 33 - 13342542 ACTGTTGAATCTAAAGAGCACAATAGCAACATC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5454279 33 + 7714307 ACTGTTGAATCTAAAGAGCACAATAGCAACATC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29266215 33 + 50890351 ACTGTTGAATCTAAAGAGCACAATAGCAACATC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 885417 33 - 2385121 ACTGTTGAATCTAAAGAGCACAATAGCAACATC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320930 33 + 4274983 ACTGTTGAATCTAAAGAGCACAATAGCAACATC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28555003 33 + 49145316 ACTGTTGAATCTAAAAAGCACAATAGCAACATC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5398465 33 + 8899380 ACTATTGAATCTAAAAAGCACAATAGCAACATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1607690 33 - 2680843 ACTGTTGAATCTAAAAAGCACAATAGCAACATC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 356585 33 - 4471408 ACTGTTGAATCTAAAAAGCACAATAGCAACATC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3957213 33 - 30143674 ACCATTTAACATACAGACCACAATAATAGTTTC i micMur3.chr22 C 0 C 0 s mm10.chr7 111087528 26 - 145441459 ATCATTTCATACAAAGACCACAGTGT------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4608111 32 - 122678785 ACCGTTTT-TTTAAAGACCACAGTAATAGCTTC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 312517 33 + 643850 ACCGTTTAATATAAAGACCACAATAGTAACTTC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e otoGar3.GL873654 5473997 627 + 5549422 I a score=4584167.000000 s hg38.chr19_GL383574v1_alt 67073 262 + 155864 TG-TGCTAAACCAGCTATT----ACATATTG--AA--TGTCCTTTG-----TATATA------TTC-TTTATTATCATAGCTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAGATTGACAGAGAGTTTCATAATAAACTTAAATTAAAAGGTAAGCTTTGATTTTTCTTT s panTro5.chr19 36135666 262 + 61309027 TG-TGCTAAACCAGCTATT----ACATATTG--AA--TGTCCTTTG-----TATATA------TTC-TTTATTATCATAGCTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAGATTGACAGAGAGTTTCATAATAAACTTAAATTAAAAGGTAAGCTTTGATTTTTCTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39881884 262 + 64411610 TG-TGCTAAACCAGCTATT----ACATATTG--AA--TGTCCTTTG-----TATATA------TTC-TTTATTATCATAGCTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAGATTGACAGAGAGTTTCATAATAAACTTAAATTAAAAGGTAAGCTTTGATTTTTCTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6299469 262 - 8369475 TG-TGCTAAACCAGCTATT----ACATATTG--AA--TGTCCTTTG-----TATATA------TTC-TTTATTATCATAGCTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAGATTGACAGAGAGTTTCATAATAAACTTAAATTAAAAGGTAAGCTTTGATTTTTCTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63891779 262 - 106955855 TG-TGCTAAACCAGCTATT----ACATATTG--AA--TGTCCTTTG-----TATATA------TTC-TTTATTATCATAGCTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAGATTGACAGAGAGTTTCATAATAAACTTAAATTAAAAGGTAAGCTTTGATTTTTCTAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30203851 263 + 53671032 TG-TGCTAAACCAGCTATT----ACATATTG--AA--TGTCCTTTG-----TATATA------TTCTTTTATTATCATAGCTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAGATTGACAGAGAGTTTCATAATAAACTTAAATTAAAAGGTAAGCTTTGATTTTTCTAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34657565 263 + 59248254 TG-TGCTAAACCAGCTATT----ACATATTG--AA--TGTCCTTTG-----TATATA------TTCTTTTATTATCATAGCTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAGATTGACAGAGAGTTTCATAATAAACTTAAATTAAAAGGTAAGCTTTGATTTTTCTAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4523760 262 - 13342542 TG-TGCTAAACCAGCTATT----ACATATTG--AA--TGTCCTTTG-----TATATA------TTC-TTTATTATCATAGCTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAGATTGACAGAGAGTTTCATAATAAACTTAAATTAAAAGGTAAGCTTTGATTTTTCTAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5454312 262 + 7714307 TG-TGCTAAACCAGCTATT----ACATATTG--AA--TGTCCTTTG-----TATATA------TTC-TTTATTATCATAGCTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAGATCGACAGAGAGTTTCATAATAAACTTAAATTAAAAGGTAAGCTTTGATTTTTCTAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29266248 262 + 50890351 TG-TGCTAAACCAGCTATT----ACATATTG--AA--TGTCCTTTG-----TATATA------TTC-TTTATTATCATAGCTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAGATTGACAGAGAGTTTCATAATAAACTTAAATTAAAAGGTAAGCTTTGACTTTTCTAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 885450 262 - 2385121 TG-TGCTAAACCAGCTATT----ACATATTG--AA--TGTCCTTTG-----TATATA------TTC-TTTATTATCATAGCTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAGATTGACAGAGAGTTTCATAATAAACTTAAATTAAAAGGTAAGCTTTGATTTTTCTAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2320963 262 + 4274983 TG-TGCTAAACCAGCTATT----ACATATTG--AA--TGTCCTTTG-----TATATA------TTC-TTTATTATCATAGCTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAGATTGACAGAGAATTTCATAATAAACTTAAATTAAAAGGTAAGCTTTGATTTTTCTAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28555036 262 + 49145316 TG-TGCTAAACCAGCTATT----ACATATTG--AA--TGTCCTTTG-----TATATA------TTC-TTTATTATCATAGCTCCAGGTGCTCCTTCGGCTCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCGCAATTCAACAAGGAAGAGATTGACAGAGAATTTCATAATAAGCTTAAATTAAAAGGTAAGCTCTGATTTTTCTAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5398498 262 + 8899380 TG-TGCTAAACCAGCTATT----ACATATTG--AA--TGTCCTTTG-----TATATA------TTC-TTTATTATCATAGCTCCAGGTGCTCCTTCAGCTCCCAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAAATTGACAGAGAGTTTCATAATAAGCTTAAATTAAAAGGTAAGCTCTGATTTTTCTAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1607723 262 - 2680843 TG-TGCTAAACCATCTATT----ACATATTG--AA--TATCCTTTG-----TATATA------TTC-TTTATTATCATAGCTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCGCAATTCAACAAGGAAGAGATTGACAGAGAGTTTCATAATAAGCTTAAATTAAAAGGTAAGCTCTGATTTTTCTAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 356618 262 - 4471408 TG-TGCTAAACCAGCTATT----ACATATTG--AA--TGTCCTTTG-----TATATA------TTC-TTTATTATCATAGCTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGGGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGGCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTCAACAAGGAAGAGATTGACAGAGAGTTTCATAATAAGCTTAAATTAAAAGGTAAGCTCTGATTTTTCTAC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3957246 265 - 30143674 TGTTGTTAAACTAGCTATT----CCATATTG--AATGTGTCCTTTG-----TCTATA------TTC-TGTATTAACATAGCTCCAGGTCCTCCTTCAGCTCCAAGAAGAGGGCGTGGGGGTCATCGAGGTGGCAGGGGAAGATTTGGTATTCGGCGAGATGGTCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTTAACAAGGAGGAGATTGACAGAGAGTTTCATAATAAACTTAAATTAAAAGGTAAGCTTTGATTTTTCTAC i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5474624 281 + 5549422 TG-TATTAGACCATCTACTGGCGTCCTATTAGTATTGTGTTCATTGTGTTTTGTATACGTTCTTTC-TTTATTAACATAGCTCCAGGTGCTCCTTCAGTTCCAAGAAGAGGGCGTGGGGGTCATCGAGGTGGCAGAGGAAGATTTGGTATTCGGAGAGATGGTCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTTAACAAGGAGGAGATCGACAGAGAATTTCATAATAAACTTAAATTAAAAGGTAAGTTTTGCTTTTTCTGC i otoGar3.GL873654 I 627 I 230 s mm10.chr7 111087554 260 - 145441459 TA-TTCTAAACGAGCTAAT----ACATACTG--AA--TGTT-ATTA-----TAAATA------TTC-TTTATTAATATAGTTCCTGGAGTTCCTTCTGCTCCAAGAAGAGGACGTGGGGGTCATCGAGGTGGCAGGGGAAGATTTGGTATCCGTCGAGATGGTCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTTAACAAGGAGGAAATTGACAGAGAGTTTCATAATAAACTTAAACTGAAAGGTAAATTTT-ATTTTTCTAC i mm10.chr7 C 0 C 0 s canFam3.chr1 4608143 240 - 122678785 ------------------------CGTCTTA--AA--TCAGCT--------TATTCT------CTC-TTTATTGATATAGTTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGAGGTGGCAGGGGACGATTTGGTATTCGACGAGATGGTCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAACGCACAATTTAACAAGGAAGAAATAGACAGAGAGTTTCATAATAAACTGAAATTGAAAGGTGAGTTTTCACTTTTCTGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 312550 259 + 643850 TG-TCCTAAACCAGCTATT----ATGTATTA--AG--TGTCCTTTG-----TACATA------TTC-TTTATTATCATAGTTCCAGGAGCTCCT---GCTCCAAGGAGAGGACGTGGGGGTCATCGAGGTGGCAGAGGAAGATTTGGTATTCGGCGAGATGGTCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTTAATAAGGAGGAAATTGATAGAGAATTTCATAATAAACTTAAATTAAAAGGTAAGTTTTAGGTTTTCTCC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I a score=843185.000000 s hg38.chr19_GL383574v1_alt 67335 55 + 155864 TCAGAAAATAATCTTATTTGATCTGTGAATTACAGATGTTTCTCAGATTAGGTGT s panTro5.chr19 36135928 55 + 61309027 TCAGAAAATAATCTTATTTGATCTGTGAATTACGGATGTTTCTCAGATTAGGTGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882146 55 + 64411610 TCAGAAAATAATCTTATTTGATCTGTGAATTACGGATGTTTCTCAGATTAGGTGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6299731 55 - 8369475 TCAGAAAATAATCTTATTTGATCTGTGAATTACAGATGTTTCTCAGATTAGGTGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892041 55 - 106955855 TCAGAAAATAATCTTATTTGATCTGTGAATTATGGATGTTTCTCAGATTAGGTGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204114 55 + 53671032 TCAGAAAATAATCTTACTTGATCTGTGAATTATGGATGTTTCTCAGATTAGGTGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34657828 55 + 59248254 TCAGAAAATAATCTTATTTGATCTGTGAATTACGGGTGTTTCTCAGATTAGGTGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524022 55 - 13342542 TCAGAAAATAATCTTATTTGATCTGTGAATTACGGATGTTTCTCAGATTAGGTGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5454574 55 + 7714307 TCAGAAAATAATCTTATTTGATCTGTGAATTACGGATGTTTCTCAGATTAGGTGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29266510 55 + 50890351 TCAGAAAATAATCTTATTTGATCTGTGAATTACAGATGTTTCTCAGATTAGGTGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 885712 55 - 2385121 TCAGAAAATAATCTTATTTGATCTGTGAATTATGGATGTTTCTCAGATTAGGTGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2321225 55 + 4274983 TCAGAAAATAATCTTATTTGATCTGTGAATTACAGATGTTTCTCAGATTAGGTGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28555298 55 + 49145316 TCAGAAAATAATTTTATTTGATCTGTGAATTATGGATGTTTCTCAGATTCGGTGT i calJac3.chr22 C 0 I 4 s saiBol1.JH378197 5398760 55 + 8899380 TCAGAAAATAATCTTATTTGATCTGTGAATTATGGATGTTTCTCAGATTAGGTGT i saiBol1.JH378197 C 0 I 4 s cebCap1.NW_016107633v1 1607985 55 - 2680843 TCAGAAAGTAATCTTATTTGATCTGTGAATTATGGATGTTTCTCAGATTAGGTGT i cebCap1.NW_016107633v1 C 0 I 4 s aotNan1.NW_018505377v1 356880 55 - 4471408 TCAGAAAATAATCTTATTTGATCTGTGAATTATGGATGTTTCTCAGATTAGGTGT i aotNan1.NW_018505377v1 C 0 I 4 s micMur3.chr22 3957511 54 - 30143674 TTAGAAAATAATC-TATTTGATCTATGAATTATGGGTGTTTTTCAAATTAGGTGT i micMur3.chr22 C 0 I 19 s otoGar3.GL873654 5475135 55 + 5549422 TCAGAAAATAATCTTATTTGATCTGTGAAGTAAAGATATTTTTCAAATTGTGTGT i otoGar3.GL873654 I 230 I 4 s mm10.chr7 111087814 53 - 145441459 TCA-AAAATGAT-TAACTTGATCTTTGAGTTAAAGATGGTTTACAACTTAGATGT i mm10.chr7 C 0 C 0 s canFam3.chr1 4608383 39 - 122678785 TCAGAAAATG---TTATTTGACTTGTGAATTGTGGATGTTTA------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 312809 55 + 643850 TAAGAAAATAATCTTTTTTGACTTGTGAATTATGGATATTTTTCAAATTGTGTAC i dasNov3.JH563638 C 0 I 4 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I a score=214311.000000 s hg38.chr19_GL383574v1_alt 67390 22 + 155864 TTTTATGTAATTCAGATTAGCT s panTro5.chr19 36135983 22 + 61309027 TTTTATGTAATTCAGATTAGCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882201 22 + 64411610 TTTTATGTAATTCAGATTAGCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6299786 22 - 8369475 TTTTATGTAATTCAGATTAGCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892096 22 - 106955855 TTTTATGTAATTCAGGTTAGCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204169 22 + 53671032 TTTTATGTAATTCAGATTAGCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34657883 22 + 59248254 TTTTATGTAATTCAGATTAGCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524077 22 - 13342542 TTTTATGTAATTCAGATTAGCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5454629 22 + 7714307 TTTTATGTAATTCAGATTAGCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29266565 22 + 50890351 TTTTATGTAATTCAGATTAGCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 885767 22 - 2385121 TTTTATGTAATTCAGATTAGCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2321280 22 + 4274983 TTTTATGTAATTCAGATTAGCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28555357 22 + 49145316 TTTTATGTAATTCAGATTAACT i calJac3.chr22 I 4 C 0 s saiBol1.JH378197 5398819 22 + 8899380 TTTTATGTAATTCAGATTAACT i saiBol1.JH378197 I 4 C 0 s cebCap1.NW_016107633v1 1608044 22 - 2680843 TTTTGTATAATTCAGATTAACT i cebCap1.NW_016107633v1 I 4 C 0 s aotNan1.NW_018505377v1 356939 22 - 4471408 TTTTATGTAATTCAGATTAACT i aotNan1.NW_018505377v1 I 4 C 0 s otoGar3.GL873654 5475194 18 + 5549422 TTTTATTTTATACAAGCC---- i otoGar3.GL873654 I 4 C 0 s mm10.chr7 111087867 5 - 145441459 ------GTAAA----------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4608422 6 - 122678785 ----ATATAA------------ i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 312868 15 + 643850 TTTTATTTAGTACAA------- i dasNov3.JH563638 I 4 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e micMur3.chr22 3957565 19 - 30143674 I a score=3750231.000000 s hg38.chr19_GL383574v1_alt 67412 207 + 155864 GTCTTGACTTTTCTGATATGTGCT----TTTGTTCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAAAACAGTGAAGGAAATGCCGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTTCTTGTGATGACAATAG s panTro5.chr19 36136005 211 + 61309027 GTCTTGACTTTTATGATATGTGCTTCTGTTTGTCCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAAAACAGTGAAGGAAATGCCGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAGTCCTTCTTTGATAATATTTCTTGTGATGACAATAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882223 211 + 64411610 GTCTTGACTTTTATGATATGTGCTTTTGTTTGTCCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAAAACAGTGAAGGAAATGCCGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTTCTTGTGATGACAATAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6299808 211 - 8369475 GTCTTGACTTTTATGATATGTGCTTTTGTTTGTCCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAAAACAGTGAAGGAAATGCCGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTTCTTGTGATGACAATAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892118 211 - 106955855 GTCTTGACTTTTATGATATGTGCTTTTGTTTGTCCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAAAACAGTGAAGGAAATGCTGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTTCTTGTGATGACAATAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204191 211 + 53671032 GTCTTGACTTTTATGATATGTGCTTTTGTTTGTCCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAAAACAGTGAAGGAAATGCTGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTTCTTGTGATGACAATAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34657905 211 + 59248254 GTCTTGACTTTTATGATATGTGCTTTTGTTTGTCCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAAAACAGTGAAGGAAATGCTGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTTCTTGTGATGACAATAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524099 211 - 13342542 GTCTTGACTTTTATGATATGTGCTTTTGTTTGTCCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAAAACAGTGAAGGAAATGCTGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTTCTTGTGATGACAATAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5454651 211 + 7714307 GTCTTGACTTTTATGATATGTGCTTTTGTTTGTCCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAAAACAGTGAAGGAAATGCTGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTTCTTGTGATGACAATAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29266587 211 + 50890351 GTCTTGACTTTTATGATATGTGCTTTTGTTTGTCCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAAAACAGTGAAGGAAATGCTGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTTCTTGTGATGACAATAG i chlSab2.chr6 C 0 T 10705 s manLeu1.NW_012102454v1 885789 211 - 2385121 GTCTTGACTTTTATGATATGTGCTTTTGTTTGTCCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTCGATACCCAAAACAGTGAAGGAAATGCTGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTTCTTGTGATGACAATAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2321302 211 + 4274983 GTCTTGACTTTTATGATACGTGCTTTTGTTTGTCCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAAAACAGTGAAGGAAATGCTGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTTCTTGTGATGACAATAG i colAng1.NW_012111697v1 C 0 T 2255 s calJac3.chr22 28555379 207 + 49145316 GTCTTGACTTTTATGATATGTACC----TTTGTCCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACTCAAAACAGTGAAGGAAATGCTGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTCGATAATATTTCTTGTGATGACAATAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5398841 211 + 8899380 GAATTGACTTTTCTGATATGTACCTTTGTTTGTCCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACTCAAAACAGTGAAGGAAATGCTGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTTCTTGTGATGACAATAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1608066 211 - 2680843 GTCTTAACTTTTATGATATGTACCTTTGTTTGTCCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACTCAAAACAGTGAAGGAAATGCTGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTTTTTGATAATATTTCTTGTGATGACAATAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 356961 211 - 4471408 GTCTTGACTTTTATGATATGTACCTTTGTTTGTCCTTAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTCGATACTCAAAACAGTGAAGGAAATGCTGATGAAGAAGATCCACTTGGACCTAATTGCTATTATGACAAAACTAAATCCTTCTTTGATAATATTTCTTGTGATGACAATAG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3957584 209 - 30143674 GTCTTGACCTTTATCGTATGTGCT--TGATTTTCCTTAGAAGATAAACTTGAGAAACAAGAGAAACCCGTAAATGGTGAAGATAAAGGAGACTCCGGAGTTGACACCCAAAACAGTGAAGGAAATGCCGATGAAGAGGATCCCCTCGGACCTAACTGCTACTATGACAAAACCAAATCCTTCTTTGATAATATTTCTTGTGATGATAATAG i micMur3.chr22 I 19 C 0 s otoGar3.GL873654 5475212 207 + 5549422 --TTTGATTTTTATGGTATGTGCT--TATTTTTCCTTAGAAGATAAACTTGAGAAACAAGACAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAGAACAGTGAAGGAAATGCTGAGGAAGAAGATCCACTGGGACCCAACTGCTACTATGACAAAACCAAGTCCTTCTTTGATAATATTTCCTGTGATGATAATAG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111087872 198 - 145441459 GTCTTAACTTGCATG-------------TTTTTCCTTAGAAGATAAACTTGAGAAACAAGAGAAACCTGTAAACGGTGAAGACAAAGGAGACTCAGGAGTCGACACTCAGAACAGTGAAGGGAATGCTGATGAGGAAGATCCCCTTGGGCCCAACTGCTACTATGACAAGACCAAGTCCTTCTTTGACAACATCTCTTGTGATGATAATAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4608428 208 - 122678785 ATCTTGACTT-TATGGTATGTGCTTC--TTTTTTATTAGAAGATAAACTTGAGAAGCAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAGAACAGTGAAGGAAATGCAGATGAAGAAGATCCTCTTGGCCCTAATTGCTATTATGACAAAACCAAATCCTTCTTTGATAATATTTCTTGTGATGATAATAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 312883 209 + 643850 GTCTTGACTTTCATGATGTATGCT--TGTTTTTCATTAGAAGATAAACTTGAGAAACAGGAAAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAAAATAGTGAAGGAAATGCTGATGAAGAAGACCCACTTGGACCTAATTGCTATTATGACAAAACGAAATCCTTCTTTGATAATATTTCTTGTGATGATAATAG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I a score=17100.000000 s hg38.chr19_GL383574v1_alt 67619 1 + 155864 G s panTro5.chr19 36136216 1 + 61309027 G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882434 1 + 64411610 G i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300019 1 - 8369475 G i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892329 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204402 1 + 53671032 G i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658116 1 + 59248254 G i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524310 1 - 13342542 G i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5454862 1 + 7714307 G i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886000 1 - 2385121 G i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28555586 1 + 49145316 G i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5399052 1 + 8899380 G i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1608277 1 - 2680843 G i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 357172 1 - 4471408 G i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3957793 1 - 30143674 G i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5475419 1 + 5549422 G i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111088070 1 - 145441459 G i mm10.chr7 C 0 C 0 s canFam3.chr1 4608636 1 - 122678785 G i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 313092 1 + 643850 G i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e chlSab2.chr6 29266798 10705 + 50890351 T e colAng1.NW_012111697v1 2321513 2255 + 4274983 T a score=180924.000000 s hg38.chr19_GL383574v1_alt 67620 17 + 155864 TAC--AGTTTTT-AAGCTGT s panTro5.chr19 36136217 17 + 61309027 TAC--AGTTTTT-AAGCTGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882435 17 + 64411610 TAC--AGTTTTT-AAGCTGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300020 17 - 8369475 TAC--AGTTTTT-AAGCTGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892330 18 - 106955855 TAC--AGTCTTTAAAGTTGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204403 18 + 53671032 TAC--AGTCTTTAAAGCTGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658117 18 + 59248254 TAC--AGTCTTTAAAGCTGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524311 18 - 13342542 TAC--AGTCTTTAAAGCTGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5454863 18 + 7714307 TAC--AGTCTTTAAAGCTGT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886001 18 - 2385121 TAC--AGTCTTTAAAGCTGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2319258 18 + 4274983 TAT--AGTCTTTAAAGCTGT i colAng1.NW_012111697v1 T 2255 C 0 s calJac3.chr22 28555587 18 + 49145316 TAT--CATCTTTAAAACTGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5399053 18 + 8899380 TAC--AGTCTTTAAAACTGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1608278 18 - 2680843 TAC--AGTCTTTAAAAGTGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 357173 18 - 4471408 TAC--AGTCTTTAAAACTGT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3957794 18 - 30143674 TAC--AGTCTTTTAAGCTAT i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5475420 16 + 5549422 TAC--A--CTCTTAAACTGT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111088071 20 - 145441459 TACTGGGTTCTGTAAGATTT i mm10.chr7 C 0 I 18 s canFam3.chr1 4608637 17 - 122678785 TAC--AGTCTTT-AAGCTGC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 313093 18 + 643850 TAT--AATCTTTTAAACTAC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=127698.000000 s hg38.chr19_GL383574v1_alt 67637 11 + 155864 TCTTTTA-TCTT s panTro5.chr19 36136234 12 + 61309027 TCTTTTGCTCTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882452 12 + 64411610 TCTTTTGCTCTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300037 12 - 8369475 TCTTTTGCTCTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892348 12 - 106955855 TCTTTTGCTCTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204421 12 + 53671032 TCTTTTGCTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658135 12 + 59248254 TCTTTTGCTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524329 12 - 13342542 TCTTTTGCTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5454881 12 + 7714307 TCTTTTGCTTTT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886019 12 - 2385121 TCTTTTGCTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2319276 12 + 4274983 TCTTTTGCTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28555605 12 + 49145316 TCCTTTGCTTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5399071 12 + 8899380 TCTTTTGCTCTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1608296 12 - 2680843 TCTTTTGTTCTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 357191 12 - 4471408 TCTTTTGCTCTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3957812 12 - 30143674 TCTTTTGCTTTT i micMur3.chr22 C 0 C 0 s mm10.chr7 111088109 12 - 145441459 tatattgtttta i mm10.chr7 I 18 C 0 s canFam3.chr1 4608654 4 - 122678785 --------TCTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 313111 12 + 643850 TCTTATGATCtt i dasNov3.JH563638 C 0 I 15927 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e otoGar3.GL873654 5475436 0 + 5549422 C e chlSab2.chr6 29266798 10705 + 50890351 T a score=478144.000000 s hg38.chr19_GL383574v1_alt 67648 51 + 155864 ATG----------ATATT-------------------------------------------------------------GATTGAAGTGTAAAATGGTT--------TCATGTAAATTCACGAGGTTTAA s panTro5.chr19 36136246 51 + 61309027 ATG----------ATATT-------------------------------------------------------------GATTGAAGTGTAAAATGGTT--------TCATGTAAATTCACGAGGTTTAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882464 51 + 64411610 ATG----------ATATT-------------------------------------------------------------GATTGAAGTGTAAAATGGTT--------TCATGTAAATTCACGAGGTTTAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300049 51 - 8369475 ATG----------ATATT-------------------------------------------------------------GATTGAAGTGTAAAATGGTT--------TCATGTAAATTCACGAGGTTTAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892360 47 - 106955855 ATG----------AT-----------------------------------------------------------------ATTGAAGTGTAAAATGGTT--------TCATGTAAATTCACGAGGTTTAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204433 51 + 53671032 ATG----------ATGTT-------------------------------------------------------------GATTGAAGTGTAAAATGGTT--------TCATGTAAATTCACAAGATTTAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658147 51 + 59248254 ATG----------ATGTT-------------------------------------------------------------GATTGAAGTGTAAAATGGTT--------TCATGTAAATTCACAAGATTTAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524341 51 - 13342542 ATG----------ATGTT-------------------------------------------------------------GATTGAAGTGTAAAATGGTT--------TCATGTAAATTCACAAGATTTAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5454893 51 + 7714307 ATG----------ATGTT-------------------------------------------------------------GATTGAAGTGTAAAATGGTT--------TCATGTAAATTCACAAGATTTAA i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886031 51 - 2385121 ATG----------ATGTT-------------------------------------------------------------GATTGAAGTGTAAAATGGTT--------TCATGTAAATTCACAAGATTTAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2319288 51 + 4274983 GTG----------ATGTT-------------------------------------------------------------GATTGAAGTGTAAAATGGTT--------TCATGTAAATTCACAAGATTTAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28555617 51 + 49145316 ATG----------ATGTT-------------------------------------------------------------GATTGAAGTGTAAAAGGGTT--------TCATGTAAATTCACAAGATTTAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5399083 51 + 8899380 ATG----------ATGTT-------------------------------------------------------------GATTGAAGTATAAAATGGTT--------TCATGTAAATTCACAAGATTTAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1608308 51 - 2680843 GTG----------ATGTT-------------------------------------------------------------GATTGAAGTATAAAATGGTT--------TCATGTAAATTCACAAGGTTTAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 357203 51 - 4471408 ATG----------ATGTT-------------------------------------------------------------GATTGAAGTGTAAAATGGTT--------TCATGTAAATTCACAAGGTTTAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3957824 46 - 30143674 ATG----------AT-----------------------------------------------------------------ATTGAAGTGTAAAATAGTT--------ACATATAAATTCACAAGA-TTAA i micMur3.chr22 C 0 C 0 s mm10.chr7 111088121 130 - 145441459 gtgttttgtctgcatgtttgttcatgtacccgtgcatatagtgcccacagggccagaaaaggtcatccagaccccttggaattgaaggcggagatggttgtgagcagccatgtgggagcttgagatttaa i mm10.chr7 C 0 I 518 s canFam3.chr1 4608658 34 - 122678785 ATG----------AAGTA------------------------------------------------------------------------------ATT--------TCTTATAAATTCACAAAGTTTAA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e dasNov3.JH563638 313123 15927 + 643850 I e otoGar3.GL873654 5475436 0 + 5549422 C e chlSab2.chr6 29266798 10705 + 50890351 T a score=91886.000000 s hg38.chr19_GL383574v1_alt 67699 8 + 155864 TGAATACT s panTro5.chr19 36136297 8 + 61309027 TGAATACT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882515 8 + 64411610 TGAATACT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300100 8 - 8369475 TGAATACT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892407 8 - 106955855 TGAATACT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204484 8 + 53671032 TGAATACT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658198 8 + 59248254 TGAATACT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524392 8 - 13342542 TGAATACT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5454944 8 + 7714307 TGAATACT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886082 8 - 2385121 TGAATACT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2319339 8 + 4274983 TGAATACT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28555668 8 + 49145316 TGAACACT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5399134 8 + 8899380 TGCACACT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1608359 8 - 2680843 TGAACACT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 357254 8 - 4471408 TGAACACT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3957870 8 - 30143674 TGAATACT i micMur3.chr22 C 0 I 68 s canFam3.chr1 4608692 8 - 122678785 TGAATACT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e dasNov3.JH563638 313123 15927 + 643850 I e otoGar3.GL873654 5475436 0 + 5549422 C e mm10.chr7 111088251 518 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=1423195.000000 s hg38.chr19_GL383574v1_alt 67707 186 + 155864 ACCATAATTGttttgttttgttttgagacagtcttactctgttactcaggctggagagcagcagtgcagtcacagctcactgtagtctcaagctcctgacctcaagcaatcctcccatctcagcctcagtaaaggggactacagttgtacaccaccccacccggctaa-tttttttcatttttttgt s panTro5.chr19 36136305 181 + 61309027 ACCATAA-----TTGttttgttttgagacagtcttactctgttactcaggctggagagcagcagtgcagtcacagctcactgtagtctcaagctcctgagctcaagcaatcctcccatctcagcctcagtagaggggactacagttgcacaccaccccacccggctaa-tttttttcatttttttgt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882523 181 + 64411610 ACCATAA-----TTGttttgttttgagacagtcttactctgttactcaggctggagagcagcagtgcagtcacagctcactgtagtctcaagctcctgagctcaagcaatcctcccatctcagcctcagtagaggggactacagttgcacaccaccccacccggctaa-tttttttcatttttttgt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300108 186 - 8369475 ACCATAATTGttttgttttgttttgagacagtcttactctgttactcaggctggagagcagcagtgcagtcacagctcactgtagtctcaagcttctgagctcaagcaatcctcccatctcagcctcagtagaggggactacagttgcacaccaccccacccggctaa-tttttttcatttttttgt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892415 180 - 106955855 ACCATAA-----TTGttttgttttgagacagtcttactctgttactcaggctggagtgcagcagtgcagtcacagctcactgtagcctcaaactcctgagctcaagcaatcctcccatctcagcctcagtagaggggactacagttgcacacca-cccacccagctaa-tttttttcatttttttgt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204492 180 + 53671032 ACCATAA-----TTGttttgttttgagacagtctcactctgttactcaggctggagtgcagcagtgcagtcacaggtcactgtagcct-aaactcctgggctcaagcaatcctcccatctcagcctcagtagaggagtctacagttgtacactaccccacccagctaa-attttttcatgtttttgt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658206 180 + 59248254 ACCATAA-----TTGttttgttttgagacagtctcactctgttactcaggctggagtgcagcagtgcagtcacagctcactgtagcct-aaactcctgggctcaagcaatcctcccatctcagcctcagtagaggagtctacagttgtacactaccccacccagctaa-attttttcatgtttttgt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524400 180 - 13342542 ACCATAA-----ttgttttgttttgagacagtctcactctgttactcaggctggagtgcagcagtgcagtcacagatcactgtagcct-aaactcctgggctcaagcaatcctcccatctcagcctcagtagaggagtctacagttgtacactaccccacccagctaa-attttttcatgtttttgt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5454952 180 + 7714307 ACCATAA-----ttgttttgttttgagacagtctcactctgttactcaggctggagtgcagcagtgcagtcacaactcactgtagcct-aaactcctgggctcaagcaatcctcccatctcagcctcagtagaggagtctacagttgtacaccaccccacccagctaa-attttttcatgtttttgt i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886090 180 - 2385121 ACCATAA-----ttgttttgttttgagacagtctcactctgttactcaggctggagtgcagcagtgcagtcacagctcactgtagcct-aaactcctgggctcaagcaatcctcccatctcagcctcagtagaggagtctacagttgtacaccaccccacccagctaa-attttttcatgtttttgt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2319347 180 + 4274983 ACCATAA-----TTGttttgttttgagacagtctcactctattactcaggctggagtgcagcagtgcagtcacagctcactgtagcct-aaactcctggactcaagcaatcctcccatctcagcctcagtagaggagtctacagttgcacaccaccccacccggctaa-attttttcatgtttttgt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28555676 179 + 49145316 ACCATAA-----TTGttttgttttgaggccgtctcactctgatacccaggctggagtgcagtggtgcagtcacagctcactgtagcctcaaattcctgggctcaagcaattcttctgcctcagccttagtagaggggactacagttgtacaccaccacacccgcctta-tttttttca--tttttgt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5399142 180 + 8899380 ACCATAA-----TTGttttgttttgaggcagtctcactctgttacccaggctggagtgcagtggtgcagtcacagctcactgtagcctcaaattcctgggctcgagcaattctcctgcctcagccttaattgaggggactacagttgcataccaccacacctgccttattttttttca--tttttgt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1608367 179 - 2680843 ACCATAA-----TTGttttgttttgaggcagtctcactctgttagccaggctggagtgcagtgatgcagtcacagctcactgtagcctcaaattcctgagctcaagcaattctcctgcctcagccttagtagaggggactacagttgcacaccaccacacccgcctta-tttttttca--tttttgt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 357262 174 - 4471408 ATCATAA----------TTGttttgaggcagtctcattctgttacccaggctggagtgcagtggtgcagtcacagctcactgtaacctcaaattcctgagctcaagcaattctcctgcctcagccttagtagaggggactatagttgcacgccactacactcgcctta-tttttttca--tttttgt i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4608700 39 - 122678785 ----------------------------------------------------------------------------TAAATATAATCT-AA----------------------------------------------------------------------TGACTAA-TTTTTTTTAATATGTTAT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e micMur3.chr22 3957878 68 - 30143674 I e dasNov3.JH563638 313123 15927 + 643850 I e otoGar3.GL873654 5475436 0 + 5549422 C e mm10.chr7 111088251 518 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=940204.000000 s hg38.chr19_GL383574v1_alt 67893 118 + 155864 agagatgggggtctcgctatgttgcccaggctaatcgtgaactcctggcctcaaga---------------tcagcctcccaa------agtactaggattacaggcgtgagccaccacacctggccATAATTGATTTT s panTro5.chr19 36136486 118 + 61309027 agagatgggggtctcgctatgttgcccaggctaatcgtgaactcctggcctcaaga---------------tcagcctcccaa------agtactaggattacaggcgtgagccaccacacctggccATAATTGATTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882704 118 + 64411610 agagatgggggtctcgctatgttgcccaggctaatcgtgaactcctggcctcaaga---------------tcagcctcccaa------agtactaggattacaggcgtgagccaccacacctggccATAATTGATTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300294 118 - 8369475 agagatgggggtctcgctgtgttgcccaggccaatcgtgaactcctggcctcaaga---------------tcagcctcccaa------agtactaggattacaggcgtgagccaccacacctggccATAATTGATTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892595 117 - 106955855 agagat-ggggtctcgctatgttgcccaggctaatcgtgaactcctggcctcaaga---------------ccagcctcccaa------agtactaggattacaggcatgagccaccacacctggccATAATTGATTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204672 117 + 53671032 agagat-ggggtctcgctatgttgcccaagctggtggtgaactcctggcctcaaga---------------ccagtctccaaa------agtactaggattacaggcatgagccaccacacctggccATAATTGATTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658386 117 + 59248254 agagat-ggggtctcgctatgttgcccaagctggtggtgaactcctggcctcaaga---------------ccagtctccaaa------agtactgggattacaggcatgagccaccacacctggccATAATTGATTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524580 117 - 13342542 agagat-ggggtctcgctatgttgcccaagctggtggtgaactcctggcctcaaga---------------ccagtctccaaa------agtactaggattacaggcatgagccaccacacctggccATAATTGATTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455132 117 + 7714307 agagat-ggggtctcgctatgttgcccaagctggtggtgaactcctggcctcaaga---------------ccagcctcccaa------agtactaggattacaggcatgagccaccacatctggccCCAATTGATTTT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886270 114 - 2385121 cgagat-ggggtctcgctatgttgcccaagctggtggtgaa---ctggcctcaaga---------------ccagcctcccaa------agtactaggattacaggcatgagccaccacacctggccCTAATTGATTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2319527 117 + 4274983 agagat-ggggtctcgctgtattgcccaagctggtggtgaactcctggcctcaaga---------------ccagcctcccaa------agtactaggattacaggcatgagccaccacacctggccATAATTGAtttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28555855 133 + 49145316 agagatgggggtcttcctttgttgcccaagctggtcttaaactcctggcctcaagtaatcctcccactacctcagcttcccaa------agtactaggattatgggcatgagctaccacacctggccATAATTGAtttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5399322 121 + 8899380 agagat-ggggtcttcctttgttgcccaggttggtcttgaactactggcctcaagcaatcctcccact---tcagcttcccga------agtactaggattacaggcatgag--------ccTGGCCATAATTGAtttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1608546 135 - 2680843 agagat-ggggtcttcctttgttgcccaggctggtcttgaactcctggcctcaagcagtcctcccacc---tcagcttcccaaagtactagtactaggattacaggcatgagccacgacacctggccATAATTGGtttt i cebCap1.NW_016107633v1 C 0 I 269 s aotNan1.NW_018505377v1 357436 129 - 4471408 agagat-ggggtcttcctttgttgcccaagctggtcttgaactcctggcctcgagcaatcctcccacc---tcagcttcccaa------agtactaggattacaggcatgagccaccacacctggccATAATTGAtttt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e micMur3.chr22 3957878 68 - 30143674 I e dasNov3.JH563638 313123 15927 + 643850 I e otoGar3.GL873654 5475436 0 + 5549422 C e mm10.chr7 111088251 518 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T e canFam3.chr1 4608739 0 - 122678785 C a score=16562.000000 s hg38.chr19_GL383574v1_alt 68011 2 + 155864 TT s panTro5.chr19 36136604 2 + 61309027 TT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882822 2 + 64411610 TT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300412 2 - 8369475 TT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892712 2 - 106955855 TT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204789 2 + 53671032 TT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658503 2 + 59248254 TT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524697 2 - 13342542 TT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455249 2 + 7714307 TT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886384 2 - 2385121 TT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2319644 2 + 4274983 tt i colAng1.NW_012111697v1 C 0 I 6048 s calJac3.chr22 28555988 2 + 49145316 tt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5399443 2 + 8899380 tt i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 357565 2 - 4471408 tt i aotNan1.NW_018505377v1 C 0 I 263 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e micMur3.chr22 3957878 68 - 30143674 I e dasNov3.JH563638 313123 15927 + 643850 I e otoGar3.GL873654 5475436 0 + 5549422 C e mm10.chr7 111088251 518 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T e canFam3.chr1 4608739 0 - 122678785 C e cebCap1.NW_016107633v1 1608681 269 - 2680843 I a score=29845.000000 s hg38.chr19_GL383574v1_alt 68013 9 + 155864 AATGTTTTA- s panTro5.chr19 36136606 9 + 61309027 AATGTTTTA- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882824 9 + 64411610 AATGTTTTA- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300414 9 - 8369475 AATGTTTTA- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892714 10 - 106955855 AATGTTTTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204791 10 + 53671032 AATGTTTTAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658505 10 + 59248254 AATGTTTTAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524699 10 - 13342542 AATGTTTTAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455251 10 + 7714307 AATGTTTTAT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886386 10 - 2385121 AATGTTTTAT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28555990 8 + 49145316 --tttttttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5399445 8 + 8899380 --tttttttt i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e micMur3.chr22 3957878 68 - 30143674 I e dasNov3.JH563638 313123 15927 + 643850 I e otoGar3.GL873654 5475436 0 + 5549422 C e mm10.chr7 111088251 518 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T e canFam3.chr1 4608739 0 - 122678785 C e aotNan1.NW_018505377v1 357567 263 - 4471408 I e cebCap1.NW_016107633v1 1608681 269 - 2680843 I e colAng1.NW_012111697v1 2319646 6048 + 4274983 I a score=21294.000000 s hg38.chr19_GL383574v1_alt 68022 3 + 155864 TTT s panTro5.chr19 36136615 3 + 61309027 TTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882833 3 + 64411610 TTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300423 3 - 8369475 TTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892724 3 - 106955855 TTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204801 3 + 53671032 TTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658515 3 + 59248254 TTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524709 3 - 13342542 TTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455261 3 + 7714307 TTT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886396 3 - 2385121 TTT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28555998 3 + 49145316 ttt i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5399453 3 + 8899380 ttt i saiBol1.JH378197 C 0 I 366 s canFam3.chr1 4608739 3 - 122678785 TTT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e micMur3.chr22 3957878 68 - 30143674 I e dasNov3.JH563638 313123 15927 + 643850 I e otoGar3.GL873654 5475436 0 + 5549422 C e mm10.chr7 111088251 518 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T e aotNan1.NW_018505377v1 357567 263 - 4471408 I e cebCap1.NW_016107633v1 1608681 269 - 2680843 I e colAng1.NW_012111697v1 2319646 6048 + 4274983 I a score=6600.000000 s hg38.chr19_GL383574v1_alt 68025 1 + 155864 G s panTro5.chr19 36136618 1 + 61309027 G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882836 1 + 64411610 G i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300426 1 - 8369475 G i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892727 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204804 1 + 53671032 G i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658518 1 + 59248254 G i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524712 1 - 13342542 G i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455264 1 + 7714307 G i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886399 1 - 2385121 G i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28556002 1 + 49145316 g i calJac3.chr22 I 1 I 243 s canFam3.chr1 4608742 1 - 122678785 G i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e micMur3.chr22 3957878 68 - 30143674 I e dasNov3.JH563638 313123 15927 + 643850 I e otoGar3.GL873654 5475436 0 + 5549422 C e mm10.chr7 111088251 518 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T e aotNan1.NW_018505377v1 357567 263 - 4471408 I e cebCap1.NW_016107633v1 1608681 269 - 2680843 I e saiBol1.JH378197 5399456 366 + 8899380 I e colAng1.NW_012111697v1 2319646 6048 + 4274983 I a score=44600.000000 s hg38.chr19_GL383574v1_alt 68026 10 + 155864 CTAAAAGAAA- s panTro5.chr19 36136619 10 + 61309027 CTAAAAGAAA- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882837 10 + 64411610 CTAAAAGAAA- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300427 10 - 8369475 CTAAAAGAAA- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892728 10 - 106955855 CTAAAAGAAA- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204805 10 + 53671032 CTAAAAGAAA- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658519 10 + 59248254 CTAAAAGAAA- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524713 10 - 13342542 CTAAAAGAAA- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455265 10 + 7714307 CTAAAAGAAA- i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886400 10 - 2385121 CTAAAAGAAA- i manLeu1.NW_012102454v1 C 0 C 0 s canFam3.chr1 4608743 11 - 122678785 CTAAAAGAATA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e micMur3.chr22 3957878 68 - 30143674 I e dasNov3.JH563638 313123 15927 + 643850 I e otoGar3.GL873654 5475436 0 + 5549422 C e mm10.chr7 111088251 518 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T e aotNan1.NW_018505377v1 357567 263 - 4471408 I e cebCap1.NW_016107633v1 1608681 269 - 2680843 I e saiBol1.JH378197 5399456 366 + 8899380 I e calJac3.chr22 28556003 243 + 49145316 I e colAng1.NW_012111697v1 2319646 6048 + 4274983 I a score=39446.000000 s hg38.chr19_GL383574v1_alt 68036 8 + 155864 ATATATAC s panTro5.chr19 36136629 8 + 61309027 ATATATAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882847 8 + 64411610 ATATATAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300437 8 - 8369475 ATATATAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892738 8 - 106955855 ATATATAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204815 8 + 53671032 ATATATGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658529 8 + 59248254 ATATATGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524723 8 - 13342542 ATATATGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455275 8 + 7714307 ATATATGC i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886410 8 - 2385121 ATATATGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2325694 8 + 4274983 ATATATGC i colAng1.NW_012111697v1 I 6048 C 0 s canFam3.chr1 4608754 8 - 122678785 ATCCGTAC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e micMur3.chr22 3957878 68 - 30143674 I e dasNov3.JH563638 313123 15927 + 643850 I e otoGar3.GL873654 5475436 0 + 5549422 C e mm10.chr7 111088251 518 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T e aotNan1.NW_018505377v1 357567 263 - 4471408 I e cebCap1.NW_016107633v1 1608681 269 - 2680843 I e saiBol1.JH378197 5399456 366 + 8899380 I e calJac3.chr22 28556003 243 + 49145316 I a score=5634.000000 s hg38.chr19_GL383574v1_alt 68044 1 + 155864 T s panTro5.chr19 36136637 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882855 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300445 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892746 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204823 1 + 53671032 T i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658537 1 + 59248254 T i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524731 1 - 13342542 T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455283 1 + 7714307 T i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886418 1 - 2385121 T i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2325702 1 + 4274983 T i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5399822 1 + 8899380 c i saiBol1.JH378197 I 366 C 0 s canFam3.chr1 4608762 1 - 122678785 T i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e micMur3.chr22 3957878 68 - 30143674 I e dasNov3.JH563638 313123 15927 + 643850 I e otoGar3.GL873654 5475436 0 + 5549422 C e mm10.chr7 111088251 518 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T e aotNan1.NW_018505377v1 357567 263 - 4471408 I e cebCap1.NW_016107633v1 1608681 269 - 2680843 I e calJac3.chr22 28556003 243 + 49145316 I a score=67309.000000 s hg38.chr19_GL383574v1_alt 68045 8 + 155864 AAAGTTCT s panTro5.chr19 36136638 8 + 61309027 AAAGTTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882856 8 + 64411610 AAAGTTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300446 8 - 8369475 AAAGTTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892747 8 - 106955855 AAAGTTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204824 8 + 53671032 AAAGTTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658538 8 + 59248254 AAAGTTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524732 8 - 13342542 AAAGTTCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455284 8 + 7714307 AAAGTTCT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886419 8 - 2385121 AAAGTTCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2325703 8 + 4274983 AAAGTTCT i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5399823 8 + 8899380 aaagtgct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1608950 8 - 2680843 aaagtgct i cebCap1.NW_016107633v1 I 269 C 0 s aotNan1.NW_018505377v1 357830 8 - 4471408 aaagtgct i aotNan1.NW_018505377v1 I 263 C 0 s canFam3.chr1 4608763 8 - 122678785 AAAATTTT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e micMur3.chr22 3957878 68 - 30143674 I e dasNov3.JH563638 313123 15927 + 643850 I e otoGar3.GL873654 5475436 0 + 5549422 C e mm10.chr7 111088251 518 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T e calJac3.chr22 28556003 243 + 49145316 I a score=13575.000000 s hg38.chr19_GL383574v1_alt 68053 2 + 155864 -AA s panTro5.chr19 36136646 2 + 61309027 -AA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882864 2 + 64411610 -AA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300454 2 - 8369475 -AA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892755 2 - 106955855 -AA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204832 2 + 53671032 -AA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658546 2 + 59248254 -AA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524740 2 - 13342542 -AA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455292 2 + 7714307 -AA i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886427 2 - 2385121 -AA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2325711 2 + 4274983 -AA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556246 2 + 49145316 -aa i calJac3.chr22 I 243 C 0 s saiBol1.JH378197 5399831 2 + 8899380 -AA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1608958 2 - 2680843 -AA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 357838 2 - 4471408 -AA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4608771 2 - 122678785 CA- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 570740 4438 + 2501019 I e micMur3.chr22 3957878 68 - 30143674 I e dasNov3.JH563638 313123 15927 + 643850 I e otoGar3.GL873654 5475436 0 + 5549422 C e mm10.chr7 111088251 518 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=140146.000000 s hg38.chr19_GL383574v1_alt 68055 11 + 155864 -----ATTATTCATTC s panTro5.chr19 36136648 11 + 61309027 -----ATTATTCATTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882866 11 + 64411610 -----ATTATTCATTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300456 11 - 8369475 -----ATTATTCATTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892757 11 - 106955855 -----ATTATTCATTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204834 11 + 53671032 -----ATTATTCATTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658548 11 + 59248254 -----ATTATTCATTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524742 11 - 13342542 -----ATTATTCATTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455294 11 + 7714307 -----ATTATTCATTC i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886429 11 - 2385121 -----ATTATTCATTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2325713 11 + 4274983 -----ATTATTCATTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556248 11 + 49145316 -----attaTTCACTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5399833 11 + 8899380 -----ATTATTCACTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1608960 11 - 2680843 -----ATTATTCATTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 357840 11 - 4471408 -----ATTATTCATTC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3957946 11 - 30143674 -----ATTATTCCTTC i micMur3.chr22 I 68 C 0 s proCoq1.NW_012149263v1 575178 11 + 2501019 -----ATTATTCCTTC i proCoq1.NW_012149263v1 I 4438 C 0 s otoGar3.GL873654 5475436 11 + 5549422 -----GTTATTCCTAC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4608773 16 - 122678785 ATGATACTACTCTTTG i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 313123 15927 + 643850 I e mm10.chr7 111088251 518 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=630139.000000 s hg38.chr19_GL383574v1_alt 68066 50 + 155864 AAAAGAAGAAATAAC-------CATATAC-----TTTTGTTTAAGGATATATTCATATTTGA s panTro5.chr19 36136659 50 + 61309027 AAAAGAAGAAATAAC-------CATATAC-----TTTTGTTTAAGGATATATTCATATTTGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882877 50 + 64411610 AAAAGAAGAAATAAC-------CATATAC-----TTTTGTTTAAGGATATATTCATATTTGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300467 50 - 8369475 AAAAGAAGAAATAAC-------CATATAC-----TTTTGTTTAAGGATATATTCATATTTGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892768 46 - 106955855 A----AAGAAATAAT-------CATGTAC-----TTTTGTTTAAGGATATATTCATATTTGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204845 55 + 53671032 ATAAGAAGAAATATC-------CATATACTTTTTTTTTGTTTAAGGATATATTCATATTTGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658559 55 + 59248254 ATAAGAAGAAATAAC-------CATATACTTTTTTTTTGTTTAAGGATATATTCATATTTGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524753 55 - 13342542 ATAAGAAGAAATAAC-------CATATACTTTTTTTTTGTTTAAGGATATATTCATATTTGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455305 54 + 7714307 ATAAGAAGAAATAAC-------CATGTAC-TTTTTTTTGTTTAAGGATATATTCATATTTGA i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886440 55 - 2385121 ATAAGAAGAAATAAC-------CATATACTTTTTTTTTGTTTAAGGATATATTCATATTTGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2325724 55 + 4274983 ATAAGAAGAAATAAC-------CATATACTTTTTTTTTGTTTAAGGATATATTTATATTTGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556259 50 + 49145316 AAAAGAAGAAATAAC-------TATATAC-----TTTTGTTTAAGGATATATGCATATTTTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5399844 46 + 8899380 AAAGGAAGAAATAAC-------CATATAC-----TTTTGTTTAAGGATATATTCGTAT---- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1608971 50 - 2680843 AAAAGAAGAAATAAT-------CATATAC-----TTTTATTTAAGGATATATTCATATTTGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 357851 50 - 4471408 AAAAGAAGAAATAAC-------CATATAC-----TTTTGTTTAAGAATGTATTCATATTTGA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3957957 50 - 30143674 AAAAGAAGAAATAAC-------CATATTC-----TTTTGTTTAGAGATATATTCACATTTGA i micMur3.chr22 C 0 I 123 s proCoq1.NW_012149263v1 575189 50 + 2501019 AAAAGAAGTAATAAC-------CATATAC-----TTTTGTTCAGAGATGTATTCACATTTGA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5475447 49 + 5549422 AAAAG-AGAAATACT-------CATATAC-----ATCTGTTCAGAGATATGTTCAGATTTGA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111088769 57 - 145441459 aaaaaaaaaaaCAACAACAAAAAACACAC-----TATTGTTTAAAGATGTAGTCACACCTAG i mm10.chr7 I 518 C 0 s canFam3.chr1 4608789 50 - 122678785 TGAAGAAGAAATAAC-------CATATAC-----TTTTGTTTAGGGATGCATTCACATTTGA i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 313123 15927 + 643850 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=112269.000000 s hg38.chr19_GL383574v1_alt 68116 10 + 155864 ATATTAGCAA s panTro5.chr19 36136709 10 + 61309027 ATATTAGCAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882927 10 + 64411610 ATATTAGCAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300517 10 - 8369475 ATATTAGCAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892814 10 - 106955855 ATATTAGCAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204900 10 + 53671032 ATATTAGTAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658614 10 + 59248254 ATATTAGTAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524808 10 - 13342542 ATATTAGTAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455359 10 + 7714307 ATATTAGTAA i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886495 10 - 2385121 ATATTAGTAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2325779 10 + 4274983 ATATTAGTAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556309 10 + 49145316 ATATTAGTAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5399890 7 + 8899380 ---TTAGTAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609021 10 - 2680843 ATATTAGTAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 357901 10 - 4471408 ATATTAGTAA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 575239 10 + 2501019 ATATTAGTAA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5475496 10 + 5549422 ATATTAGTAA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111088826 7 - 145441459 ATATTAG--- i mm10.chr7 C 0 C 0 s canFam3.chr1 4608839 2 - 122678785 --------AA i canFam3.chr1 C 0 C 0 e micMur3.chr22 3958007 123 - 30143674 I e dasNov3.JH563638 313123 15927 + 643850 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=419843.000000 s hg38.chr19_GL383574v1_alt 68126 40 + 155864 TTAAAAC--AAGCATTTAGG-----TAATGTCTAAGTAGGACCTTTT s panTro5.chr19 36136719 40 + 61309027 TTAAAAC--AAGCATTTAGG-----TAATGTCTAAGTAGGACCTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882937 40 + 64411610 TTAAAAC--AAGCATTTAGG-----TAATGTCTAAGTAGGACCTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300527 40 - 8369475 TTAAAAC--AAGCATTTAGG-----TAATGTCTAAGTAGGACCTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892824 39 - 106955855 TTAAAAC--AAGCATTTAGG-----TAATGTCTAAGTAGGA-CTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204910 42 + 53671032 TTAAAACAGAAGCATTTAGG-----TAATATCTAAGTAGAGCCTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658624 42 + 59248254 TTAAAACAGAAGCATTTAGG-----TAATATCTAAGTAGGGCCTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524818 42 - 13342542 TTAAAACAGAAGCATTTAGG-----TAATATCTAAGTAGGGCCTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455369 42 + 7714307 TTAAAACAGAAGCATTTAGG-----TAATATCTAAGTAGGGCCTTTT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886505 42 - 2385121 TTAAAACAGAAGCATTTAGG-----TAATATCTAAGTAGGGCCTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2325789 42 + 4274983 TTAAAACAGAAACATTTAGG-----TAATATCTAAGTAGGGCCTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556319 36 + 49145316 TTAAAAC--AAGC----AGT-----TAATATCTAAGTATGACCTTTT i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5399897 40 + 8899380 TTAAAAC--AAGCATTTAGT-----TAATGTCTAAGTATGACCATTT i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107633v1 1609031 40 - 2680843 TTAAAGC--AAGCATTTAGT-----TAATGTCTAAGTATGACATTTT i cebCap1.NW_016107633v1 C 0 I 1 s aotNan1.NW_018505377v1 357911 40 - 4471408 TTAAAAC--AAGCATTTAGT-----TAATGTCTAAGTATGACCTTTT i aotNan1.NW_018505377v1 C 0 I 1 s proCoq1.NW_012149263v1 575249 47 + 2501019 TTAAAACAGAAGCATTCATGTATAATAATGTCTCAGTAAGACTTTTT i proCoq1.NW_012149263v1 C 0 I 85 s otoGar3.GL873654 5475506 42 + 5549422 TTAAAACAGAAACATTCATG-----TAATAGCTAAGTAAGACCTTTT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111088833 31 - 145441459 TTAAA----CAGCATTTGTG-----TAACAT-------AAACCTTTT i mm10.chr7 C 0 C 0 s canFam3.chr1 4608841 36 - 122678785 TTAAACA--AAACATTCCTC-----TAACAT----GTGAGACCTTTT i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 329050 36 + 643850 TTAAGAA--AAACATTCATC-----TAATATCTAAG----ACCTTCT i dasNov3.JH563638 I 15927 C 0 e micMur3.chr22 3958007 123 - 30143674 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=859889.000000 s hg38.chr19_GL383574v1_alt 68166 76 + 155864 TTTCACCCCTGTATGTTACAGTTCAAATGAAGCCAGAACC-GAAGTGCTAAT-CTACTTTGAAGTTTGCTGGTACCAT s panTro5.chr19 36136759 76 + 61309027 TTTCACCCCTCTATGTTACAGTTCAAATGAAGCCAGAACC-GAAGTGCTAAT-CTACTTTGAAGTTTGCTGATACCAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39882977 76 + 64411610 TTTCACCCCTCTATGTTACAGTTCAAATGAAGCCAGAACC-GAAGTGCTAAT-CTACTTTGAAGTTTGCTGATACCAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300567 75 - 8369475 TTTCA-CCCTCTATGTTACAGTTCAAATGAAGCCAGAACC-GAAATGCTAAT-CTACTTTGAAGTTTGCTGATACCAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892863 76 - 106955855 TTTCACCCCTCTATTTTGCAGTTCAAATGAAGCCAGAACC-GAAGTGCTAAT-CTACTTTGAAGTTTGCTGATACCAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30204952 76 + 53671032 TTTCACCCCTCTACATTGTAGTTCAAATGAAGCCAGAACC-GAAGTGCTAAT-CTACTTTGAAGTTTGCTGATACCAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658666 76 + 59248254 TTTCACCCCTCTACATTGTAGTTCAAATGAAGCCAGAACC-GAAGTGCTAAT-CTACTTTGAAGTTTGCTGATACCAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524860 76 - 13342542 TTTCACCCCTCTACATTGTAGTTCAAATGAAGCCAGAACC-GAAGTGCTAAT-CTACTTTGAAGTTTGCTGATACCAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455411 76 + 7714307 TTTCACCCCTCTACATTGTAGTTCAAATGAAGCCAGAACC-GAAGTGCTAAT-CTACTTTGAAGTTTGCTGATACCAT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886547 76 - 2385121 TTTCACCCCTCTACATTGTAGTTCAAACGAAGCCAGAACC-GAAGTGCTAAT-CTACTTTGAAGTTTGCTGATACCAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2325831 76 + 4274983 TTTCACCCCTCTACATTGTAGTTCAAATGAAGCCAGAACC-GAAGTGCTAAT-CTACTTTGAGGTTTGCTGATACTAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556356 76 + 49145316 TTTCATCCCTTTACATTGTAGTTAAAATGAAGCCAGAACC-AAAGTGCTAAT-CTACTTTGAAGTTTGCTGATACCAT i calJac3.chr22 I 1 I 2 s saiBol1.JH378197 5399938 77 + 8899380 TTTCACCCCTCTACATTGTAGTTCAAATGAAGCCAGAACCAAAAGTGCTTAT-CTATTTTGAAGTTTGCTGATGCCAT i saiBol1.JH378197 I 1 I 320 s cebCap1.NW_016107633v1 1609072 76 - 2680843 TTTCACCCCTCTACATTGTAGTTCAAATGAAGCCAGAACC-AAAGTGCTAAT-CTACTTTGAAGTTTGCTGATACTAT i cebCap1.NW_016107633v1 I 1 I 2 s aotNan1.NW_018505377v1 357952 76 - 4471408 TTTCACCCCTCTACATTGTAGTTCAAATGAAGCCAGAACC-AAAGTGCTAAT-CTATTTTGAGGTTTGCTGATACCAT i aotNan1.NW_018505377v1 I 1 I 2 s otoGar3.GL873654 5475548 62 + 5549422 ---------------CTGTAGATCAAGTGAAGCCAAGGCT-AAAGTGCTAATATTACTTTGAAGTTTGCTGATACAAC i otoGar3.GL873654 C 0 I 2 s mm10.chr7 111088864 76 - 145441459 CGTTATCTGTCTATATTATA-TTCAAATGAAACCAGACCC-AAGTGGAAAATACTTCTTCAGAATGGAATCATACAGT i mm10.chr7 C 0 C 0 s canFam3.chr1 4608878 78 - 122678785 CTTTACTCCCCTACAGTGTAGTTGAAATGGAGCCATGGCCAAAAGTGCTAATGTTACTTTGAAGTTTGCTGATAGAGT i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 329086 76 + 643850 --TCAACCCTCTGCATTGCCATTCAAGTGAGATCAAAGCAAAAAGTGCTAATATTTCTGTAAAGTTTGCTGATACAGT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 575296 85 + 2501019 I e micMur3.chr22 3958007 123 - 30143674 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=57888.000000 s hg38.chr19_GL383574v1_alt 68242 4 + 155864 AAAA s panTro5.chr19 36136835 4 + 61309027 AAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883053 4 + 64411610 AAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300642 4 - 8369475 AAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892939 4 - 106955855 AAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205028 4 + 53671032 AAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658742 4 + 59248254 AAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524936 4 - 13342542 AAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455487 4 + 7714307 AAAA i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886623 4 - 2385121 AAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2325907 4 + 4274983 AAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556434 4 + 49145316 AAAA i calJac3.chr22 I 2 C 0 s saiBol1.JH378197 5400335 4 + 8899380 aaaA i saiBol1.JH378197 I 320 C 0 s cebCap1.NW_016107633v1 1609150 4 - 2680843 AAAA i cebCap1.NW_016107633v1 I 2 C 0 s aotNan1.NW_018505377v1 358030 4 - 4471408 AAAA i aotNan1.NW_018505377v1 I 2 C 0 s otoGar3.GL873654 5475612 2 + 5549422 --AA i otoGar3.GL873654 I 2 I 2 s mm10.chr7 111088940 4 - 145441459 AAAA i mm10.chr7 C 0 I 2 s canFam3.chr1 4608956 4 - 122678785 AAAA i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 329162 4 + 643850 AAAA i dasNov3.JH563638 C 0 I 2 e proCoq1.NW_012149263v1 575296 85 + 2501019 I e micMur3.chr22 3958007 123 - 30143674 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=726228.000000 s hg38.chr19_GL383574v1_alt 68246 54 + 155864 CTGCCAGATTGTAGTAAATGTGGGTCCAGAA-------------------------AATT-----------------------GGCAAATTATTGA----GAGGTT s panTro5.chr19 36136839 54 + 61309027 CTGCCAGATTGTAGTAAATGTGGGTCCAGAA-------------------------AATT-----------------------GGCAAATTATTGA----GAGGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883057 54 + 64411610 CTGCCAGATTGTAGTAAATGTGGGTCCAGAA-------------------------AATT-----------------------GGCAAATTATTGA----GAGGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300646 54 - 8369475 CTGCCAGATTGTAGTAAATGTGGGTCCAGAA-------------------------AATT-----------------------GGCAAATTATTGA----GAGGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892943 54 - 106955855 CTGCCAGATTGTAGTAAATGTGGGTCCAGAA-------------------------AATT-----------------------GGCAAATTATTGA----GAGGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205032 54 + 53671032 CTGCCAGACTGTAGTAAATATGGGTCCAGAA-------------------------AATT-----------------------GGCAAATTATTGA----GAGGTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658746 54 + 59248254 CTGCCAGACTGTAGTAAATATGGGTCCAGAA-------------------------AATT-----------------------GGCAAATTATTGA----GAGGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524940 54 - 13342542 CTGCCAGACTGTAGTAAATATGGGTCCAGAA-------------------------AATT-----------------------GGCAAATTATTGA----GAGGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455491 54 + 7714307 CTGCTAGACTGTAGTAAATATGGGTCCAGAA-------------------------AATT-----------------------GGCAAATTATTGA----GAGGTT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886627 54 - 2385121 CTGCTAGACTGTAGTAAATATGGGTCCAGAA-------------------------AATT-----------------------GGCAAATTATTGA----GAGGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2325911 54 + 4274983 CTGCCAGACTGTAGTAAATATGTGTCCAGAA-------------------------AATT-----------------------GGCAAATTATTGA----GAGGTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556438 52 + 49145316 CTGCCAGATTGTAGTAAATGTGGGTCCAGAA-------------------------AATT-----------------------GGCAAATTATT------GAGGTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5400339 54 + 8899380 CTGCCGGATTGTAGTAAATGTGGGTCCAGAA-------------------------AATT-----------------------GGCAAATTATTGA----GAGGTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609154 54 - 2680843 CTGCCAGATTGTAGTAAATGTGGGTCCAGAA-------------------------AATT-----------------------GGTAAATTATTGA----GAGGTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358034 54 - 4471408 CTGCCAGATTGTAGTAAATGTGGGTCCAGAA-------------------------AATT-----------------------GGCAAATTATTGA----AAGGTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3958130 54 - 30143674 CTGCCACATTGTAGTAAATGTGGGTCCAGAA-------------------------AATT-----------------------GGCAGATTATTGT----GAGGTT i micMur3.chr22 I 123 I 54 s proCoq1.NW_012149263v1 575381 54 + 2501019 CTGCCACATTGTGGTAAATGTGGGTCCAGAA-------------------------AATT-----------------------GGCAAATTACTGT----GAGGTT i proCoq1.NW_012149263v1 I 85 C 0 s otoGar3.GL873654 5475616 54 + 5549422 CTTCCATATCATAGTAAATGTGGGTTTAGAA-------------------------AATT-----------------------GGCAGATTATTGT----GAGGTT i otoGar3.GL873654 I 2 C 0 s mm10.chr7 111088946 106 - 145441459 CTGACATATTACAGTTAAAGAAGATCCAGAagccgggcgtggtggtacacgcctttaatcccagcactcaggaggcagaggcaggcggatttctgagtttgaggcc i mm10.chr7 I 2 I 104 s canFam3.chr1 4608962 44 - 122678785 TGGCTGTATGGCAGCAAAGGTGGGCCCAGAA-------------------------AATT-----------------------GTCAAGTTA-------------- i canFam3.chr1 I 2 C 0 s dasNov3.JH563638 329168 46 + 643850 CTGCCATATTTCAGAGAAAGTG--------A-------------------------ATGT-----------------------GTCCAATTATTGT----GAGGGT i dasNov3.JH563638 I 2 C 0 e chlSab2.chr6 29266798 10705 + 50890351 T a score=69692.000000 s hg38.chr19_GL383574v1_alt 68300 5 + 155864 AATTA s panTro5.chr19 36136893 5 + 61309027 AATTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883111 5 + 64411610 AATTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300700 5 - 8369475 AATTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63892997 5 - 106955855 AATTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205086 5 + 53671032 AATTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658800 5 + 59248254 AATTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524994 5 - 13342542 AATTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455545 5 + 7714307 AATTA i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886681 5 - 2385121 AATTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2325965 5 + 4274983 AATTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556490 5 + 49145316 AATTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5400393 5 + 8899380 AATTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609208 5 - 2680843 AATTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358088 5 - 4471408 AATTA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 575435 5 + 2501019 AATTA i proCoq1.NW_012149263v1 C 0 I 18 s otoGar3.GL873654 5475670 5 + 5549422 GATTT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111089156 5 - 145441459 AATTG i mm10.chr7 I 104 I 9 s dasNov3.JH563638 329214 5 + 643850 AATTA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3958184 54 - 30143674 I e chlSab2.chr6 29266798 10705 + 50890351 T e canFam3.chr1 4609006 0 - 122678785 C a score=147686.000000 s hg38.chr19_GL383574v1_alt 68305 21 + 155864 AAGGACCCAGTGTGAGGAACT s panTro5.chr19 36136898 21 + 61309027 AAGGACCCAGTGTGAGGAACT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883116 21 + 64411610 AAGGACCCAGTGTGAGGAACT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300705 21 - 8369475 AAGGACCCAGTGTGGGGAACT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893002 21 - 106955855 AAGGACCCAGTGTGAGGAACT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205091 20 + 53671032 AAGGACCCAGTGTGAGG-ATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658805 20 + 59248254 AAGGACCCAGTGTGAGG-ATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4524999 20 - 13342542 AAGGACCCAGTGTGAGG-ATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455550 20 + 7714307 AAGGATCCAGTGTGAGG-ATT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886686 20 - 2385121 AAGGACCCAGTGTGAGG-ATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2325970 20 + 4274983 AAGGACCCAGTGTGAGG-ATT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556495 21 + 49145316 AAGGACCCAGTTCGAGGAACT i calJac3.chr22 C 0 I 282 s saiBol1.JH378197 5400398 21 + 8899380 AAGGACCCAGTGTGAGGAACT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609213 20 - 2680843 AAGGACCCAGTGCAAGGAAC- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358093 21 - 4471408 AAGGACGGAGTGCAAGGAACT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5475675 16 + 5549422 --AAACCCCATGTAGCAA--- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111089170 21 - 145441459 AATGACTTAGCACATTAAGCT i mm10.chr7 I 9 C 0 s canFam3.chr1 4609006 13 - 122678785 AAGGATCCAGTTT-------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 329219 21 + 643850 AAAGACCTAGCATAGCAAGCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 575440 18 + 2501019 I e micMur3.chr22 3958184 54 - 30143674 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=24065.000000 s hg38.chr19_GL383574v1_alt 68326 3 + 155864 -AAC s panTro5.chr19 36136919 3 + 61309027 -AAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883137 3 + 64411610 -AAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300726 3 - 8369475 -AAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893023 3 - 106955855 -AAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205111 3 + 53671032 -AAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658825 3 + 59248254 -AAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525019 3 - 13342542 -AAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455570 3 + 7714307 -AAC i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886706 3 - 2385121 -AAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2325990 3 + 4274983 -AAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556798 3 + 49145316 -AAC i calJac3.chr22 I 282 C 0 s saiBol1.JH378197 5400419 3 + 8899380 -AAC i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 358114 3 - 4471408 -AAC i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111089191 3 - 145441459 -AAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4609019 3 - 122678785 -AGC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 329240 3 + 643850 GAA- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 575440 18 + 2501019 I e micMur3.chr22 3958184 54 - 30143674 I e otoGar3.GL873654 5475691 0 + 5549422 C e chlSab2.chr6 29266798 10705 + 50890351 T e cebCap1.NW_016107633v1 1609233 0 - 2680843 C a score=432618.000000 s hg38.chr19_GL383574v1_alt 68329 47 + 155864 AGTTCTAGAGGTTCTCCTGCCCAATCCAAATTGTCA------------TTGTCCTTGTC-- s panTro5.chr19 36136922 41 + 61309027 AGTTCTAGAGGTTCTCCTGCCCAATCCAA------A------------TTGTCCTTGTC-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883140 41 + 64411610 AGTTCTAGAGGTTCTCCTGCCCAATCCAA------A------------TTGTCCTTGTC-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300729 41 - 8369475 AGTTCTAGAGGTTCTCCTGCCCAATCCAA------A------------TTGTCCTTGTC-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893026 41 - 106955855 AGTTCTAGAGGTTCTCCTGCCCAATCCAG------G------------TTGTCCTTGTC-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205114 47 + 53671032 AGTTCTAGAGGTTCTCCTGCCCAATCCAG------A------ttgtccttgtccttgtc-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658828 47 + 59248254 AGTTCTAGAGGTTCTCCTGCCCAATCCAG------A------ttgtccttgtccttgtc-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525022 47 - 13342542 AGTTCTAGAGGTTCTCCTGCCCAATCCAG------A------ttgtccttgtccttgtc-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455573 47 + 7714307 AGTTCTAGAGGTTCTCCTGCCCAATCCAG------A------ttgtccttgtccttgtc-- i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886709 53 - 2385121 AGTTCTAGAGGTTCTCCTGCCCAATCCAG------Attgtccttgtccttgtccttgtc-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2325993 47 + 4274983 AGTTCTGGAGGTTCTCCTGCCCAATCCAG------A------TTATCCTTGTCCTTGTC-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556801 41 + 49145316 AGTTCTAGAGGTTCTCCTGCCCAATCCAG------A------------TTGTCCTTGTC-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5400422 41 + 8899380 AGTTCTAGAGGTTCTCCTGCCCAATCCAG------G------------TTGTCCTTGTC-- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609233 41 - 2680843 AGTTCTAGAGGTTCCCCTGCCCAATCCAG------A------------TTGTCCTTGTC-- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358117 41 - 4471408 AGTTCTAGAGGTTCTCCTGCCCAATCCAG------A------------TTGTCCTTGTC-- i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 575458 38 + 2501019 AGTTCTAGAGGTTCTGCTGCCC-TTCCAA------A------------TTGTCTTTG---- i proCoq1.NW_012149263v1 I 18 C 0 s otoGar3.GL873654 5475691 30 + 5549422 ----------GTTCTGCTCCCT-ATTGAA------G------------TTGTCTATGTT-- i otoGar3.GL873654 C 0 I 2 s mm10.chr7 111089194 40 - 145441459 AGCTGCAGAAG-TCTGCTGCCCGCATCAC------A------------TTGCCTTTGTC-- i mm10.chr7 C 0 I 2 s canFam3.chr1 4609022 32 - 122678785 AGTTC---AGTTTCTGCTACCCATTCCAG------A------------TTTTT-------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 329243 43 + 643850 GTTTCCAGAAGTTCTGCTGCCCAATCTAA------A------------GTCTCTCTGAACT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3958184 54 - 30143674 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=577625.000000 s hg38.chr19_GL383574v1_alt 68376 39 + 155864 CTTTTCCTGGCTGAAGTTTGGTGCCCTCTGGTGGCAGTT s panTro5.chr19 36136963 39 + 61309027 CTTGTCCTGGCTGAAGTTTGGTGCCCTCTGGTGGCAGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883181 39 + 64411610 CTTGTCCTGGCTGAAGTTTGGTGCCCTCTGGTGGCAGCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300770 39 - 8369475 CTTGTCCTGGCTGAAGTTTGGTGCCCTCTGGTGGCAGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893067 38 - 106955855 CTTGTCCTGGCTGAAGTTTGGTGCCCTCTGGTGGCAGT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205161 39 + 53671032 cttgtcctGGCTGAAGTTTGGTGCCCTCTGGTGGCAGTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658875 39 + 59248254 cttgtcctGGCTGAAGTTTGGTGCCCTCTGGTGGCAGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525069 39 - 13342542 cttgtcctGGCTGAAGTTTGGTGCCCTCTGGTGGCAGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455620 39 + 7714307 cttgtcctGGCTGAAGTTTGGTGCCCTCTGGTGGCAGTT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886762 39 - 2385121 cttgtcctGGCTGAAGTTTGGTGCCCTCTGGTGGCAGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326040 39 + 4274983 CTTGTCCTGGCTGAAGTTTGGTGCCCTCTGGTGGCAGTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556842 39 + 49145316 CTTGTCGTGGCTGAAGTCTGGTGCCCTCTGGTGGCAGTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5400463 39 + 8899380 CTTGTCCTGGCTGAAGTTTGGTGCCCTCTGGTGGCAGTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609274 39 - 2680843 CTTGTCCTGGCTGAAGTTTGGTGCCCTCTGGTGGCAGTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358158 39 - 4471408 CTTGTCCTGGCTGAAGTTTGGTGCCCTCTGGTGGCAGTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3958238 39 - 30143674 CTTTTCTTGGCTGCAGTTTGGTGCCACCTGGTGGCAGTT i micMur3.chr22 I 54 I 45 s proCoq1.NW_012149263v1 575496 35 + 2501019 ----TTCTGGCTGCAGTTTGGTGCCACCTGGTGGCAGTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5475723 31 + 5549422 --------GGCTGAGGTTTGGTGCCACCCCGTGGCAATT i otoGar3.GL873654 I 2 C 0 s mm10.chr7 111089236 31 - 145441459 --------GACTGTAGCTCAGTGCCCCCTGGAGGCAACT i mm10.chr7 I 2 C 0 s canFam3.chr1 4609054 39 - 122678785 CTTCTCCTAACGGTAGTTTGGTGCCACCTGGTGGCAGTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 329286 31 + 643850 --------GGTTTCAGTTTGGTGCTACCTCTTGGTGATT i dasNov3.JH563638 C 0 C 0 e chlSab2.chr6 29266798 10705 + 50890351 T a score=190532.000000 s hg38.chr19_GL383574v1_alt 68415 16 + 155864 GTTTGCTTCA-A-TATAA s panTro5.chr19 36137002 16 + 61309027 GTTTGCTTCA-A-TATAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883220 16 + 64411610 GTTTGCTTCA-A-TATAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300809 16 - 8369475 GTTTGCTTCA-A-TATAA i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30205200 16 + 53671032 GTTTGCTTCA-G-TATAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658914 16 + 59248254 GTTTGCTTCA-G-TATAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525108 16 - 13342542 GTTTGCTTCA-G-TATAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455659 16 + 7714307 GTTTGCTTCA-G-TATAA i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886801 16 - 2385121 GTTTGCTTCA-G-TATAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326079 17 + 4274983 GTTTGCTTCA-GTTATAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556881 16 + 49145316 GTTTACTTCA-G-TATAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5400502 16 + 8899380 GTTTACTTCA-G-TATAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609313 16 - 2680843 GTTTACTTCA-G-TATAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358197 16 - 4471408 GTTTACTTCA-G-TATAA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 575531 16 + 2501019 GTTTGCTTCA-G-TTTAA i proCoq1.NW_012149263v1 C 0 I 34 s otoGar3.GL873654 5475754 16 + 5549422 GCTTGCTTCG-G-TTTAA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111089267 16 - 145441459 GTTGGCTTCA-G-TGTAA i mm10.chr7 C 0 C 0 s canFam3.chr1 4609093 16 - 122678785 GTCTACTTCA-G-CATAA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 329317 17 + 643850 GTCTATTTCATA-TTTAA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3958277 45 - 30143674 I e chlSab2.chr6 29266798 10705 + 50890351 T e nomLeu3.chr10 63893105 0 - 106955855 C a score=337773.000000 s hg38.chr19_GL383574v1_alt 68431 33 + 155864 ACATGGATG---GACATAATTCTGAGTCCCACGATT s panTro5.chr19 36137018 33 + 61309027 ACATGGATG---GACATAATTCTGAGTCCCACGATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883236 33 + 64411610 ACATGGATG---GACATAATTCTGAGTCCCACGATT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300825 33 - 8369475 ACATGGATG---GACATAATTCTGAGTCCCACGATT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893105 30 - 106955855 ---TGGGTG---GACATAATTCTGAGTCCCACGATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205216 33 + 53671032 ACATAGATG---GACATAGTTCTGAGTCCCACGATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658930 33 + 59248254 ACATAGATG---GACATAGTTCTGAGTCCCACGATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525124 33 - 13342542 ACATAGATG---GACATAGTTCTGAGTCCCACGATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455675 33 + 7714307 ACATAGATG---GACATAGTTCTGAGTCCCACAATT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886817 33 - 2385121 ACATAGATG---GACATAGTTCTGAGTCCCACAATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326096 33 + 4274983 ACATAGATG---GACATAATTCTGAGTCCCACAATT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556897 33 + 49145316 ACATGGTTG---GAGATGATTCTGAGTCCCACAATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5400518 33 + 8899380 ACATGGTTG---GAGATAATTCTGAGCCCCGCGATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609329 31 - 2680843 ACGTGGTTG---GAGATA--TCTGAGTCCCACAATT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358213 33 - 4471408 ACATAGTTG---GAGATAATTCTGAGTCCCACAATT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5475770 33 + 5549422 ATATGGATG---GGGATGAGTCTGGGTCCTATGATT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111089283 29 - 145441459 ATATGGACA---GGGAGG--CCTGAGTGCTAGTA-- i mm10.chr7 C 0 C 0 s canFam3.chr1 4609109 36 - 122678785 ACTTGAATGGGTGATACTGATCTGAGTCCTGCAATT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 329334 33 + 643850 ACATGCATG---GGGATGATTCTGAGTCCTATGATT i dasNov3.JH563638 C 0 I 4 e proCoq1.NW_012149263v1 575547 34 + 2501019 I e micMur3.chr22 3958277 45 - 30143674 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=16511.000000 s hg38.chr19_GL383574v1_alt 68464 1 + 155864 G s panTro5.chr19 36137051 1 + 61309027 G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883269 1 + 64411610 G i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300858 1 - 8369475 G i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893135 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205249 1 + 53671032 G i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658963 1 + 59248254 G i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525157 1 - 13342542 G i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455708 1 + 7714307 G i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886850 1 - 2385121 G i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326129 1 + 4274983 G i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556930 1 + 49145316 G i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5400551 1 + 8899380 G i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609360 1 - 2680843 G i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358246 1 - 4471408 G i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 575581 1 + 2501019 G i proCoq1.NW_012149263v1 I 34 C 0 s otoGar3.GL873654 5475803 1 + 5549422 A i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111089312 1 - 145441459 G i mm10.chr7 C 0 C 0 s canFam3.chr1 4609145 1 - 122678785 G i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 329371 1 + 643850 G i dasNov3.JH563638 I 4 C 0 e micMur3.chr22 3958277 45 - 30143674 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=256523.000000 s hg38.chr19_GL383574v1_alt 68465 19 + 155864 GCTGGATGA----------------CAGCAGCAAT s panTro5.chr19 36137052 19 + 61309027 GCTGGATGA----------------CAGCAGCAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883270 19 + 64411610 GCTGGATGA----------------CAGCAGCAAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300859 19 - 8369475 GCTGGATGA----------------CAGCAGCAAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893136 19 - 106955855 GCTGGACGA----------------CAGCAGCAAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205250 19 + 53671032 GCTGGATGA----------------CAGCAGCAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658964 18 + 59248254 GC-GGATGA----------------CAGCAGCAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525158 19 - 13342542 GCTGGATGA----------------CAGCAGCAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455709 19 + 7714307 GCTGGATGA----------------CAGCAGCAAG i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886851 19 - 2385121 GCTGGATGA----------------CAGCAGCAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326130 19 + 4274983 GCTGGATGA----------------CAGCAGCAAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556931 19 + 49145316 GCTAGACGA----------------CAGCAGCAAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5400552 19 + 8899380 GCTGGACGA----------------CAGCAGCAAC i saiBol1.JH378197 C 0 I 317 s cebCap1.NW_016107633v1 1609361 19 - 2680843 GCTGGACGA----------------CAGCCGCAAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358247 19 - 4471408 GCTGGACGA----------------CAGCAGCAAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3958322 19 - 30143674 GCTGGATGA----------------CAGCAGCAAC i micMur3.chr22 I 45 C 0 s proCoq1.NW_012149263v1 575582 19 + 2501019 GCTGGATGA----------------CAGCAGCAAC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5475804 35 + 5549422 TCTGGATGGATTATCTAGGATGGATAATCAGCAAC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111089313 19 - 145441459 GCTGGATGA----------------TTGGTGGAAC i mm10.chr7 C 0 C 0 s canFam3.chr1 4609146 19 - 122678785 GCTGTAGGA----------------CAGCACCAGT i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 329372 19 + 643850 GGTGGAGGA----------------AAGCAGCAGC i dasNov3.JH563638 C 0 C 0 e chlSab2.chr6 29266798 10705 + 50890351 T a score=695750.000000 s hg38.chr19_GL383574v1_alt 68484 51 + 155864 AATTCAGATACTTCTTGGGTTACTTGGTATCGGGTCCATAGATTGGGCCAG s panTro5.chr19 36137071 51 + 61309027 AATTCAGATACTTCTTGGGTTAATTGGTATCGGGTCCATAGATTGGGCCAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883289 51 + 64411610 AATTCAGATACTTCTTGGGTTAATTGGTATCGGGTCCATAGATTGGGCCAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300878 51 - 8369475 AATTCAGATACTTCTTGGGTTAATTGATATCGGGTCCATAGATTGGGCCAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893155 51 - 106955855 AATTCAGATACTTCTTGGGTTAATTGGTATCGGGTCCAGAGATTGGGCCAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205269 51 + 53671032 AATTCAGATACTTCTTGGGTTAATTGGTATCGGGTCCAGAGATTGGGCCAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34658982 51 + 59248254 AATTCAGATACTTCTTGGGTTAATTGGTATCGGGTCCAGAGATTGGGCCAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525177 51 - 13342542 AATTCAGATACTTCTTGAGTTAATTGGTATCGGGTCCAGAGATTGGGCCAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455728 51 + 7714307 AATTCAGATACTTCTTGGGTTAATTGATATCGGGTCCAGAGATTGGGCCAG i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886870 51 - 2385121 AATTCAGATACTTCTTGGGTTAATTGATATCGGGTCCAGAGATTGGGCCAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326149 51 + 4274983 AATTAAGATACTTCTTGGGTTAATTGGTATCGGGTCCAGAGATTGGGCCGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28556950 51 + 49145316 AGTTCAGATACTTGTTGGGTTCTTTGGCATTAGATCCAGAGATTGGGCCAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5400888 51 + 8899380 aaTTGAGATTCTTGTTGGGTTCATTGACATTAAATCCAGAGATTGGGCCAG i saiBol1.JH378197 I 317 C 0 s cebCap1.NW_016107633v1 1609380 51 - 2680843 AATTCAGATACTTCTTGGGTTCATTGGCATTAGATCCAGAGATTGGGCCAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358266 51 - 4471408 AATTCAGATACTTGTTGGGTTCATTGGCATTGGATCCAGAGATTGGGCCAG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3958341 51 - 30143674 AATTCAGACACCTGTTGGGTTCATTGGCATTGGATCCAGAGAATGGGCCAG i micMur3.chr22 C 0 I 192 s proCoq1.NW_012149263v1 575601 51 + 2501019 AATTCAGACACCTGTTGGGTTCATTGGCATTGGATCCAGAGAATGGGCCAG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5475839 51 + 5549422 AATTCAGATACCTATTACCTTAGTTGGCACTGGATCCAGAGAGTGGGCCGG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111089332 50 - 145441459 AGTGTAGGCACTTGCTGGGTTAATTT-CATCAGGTCCAGAGATTGAGCTAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4609168 45 - 122678785 AATTTAAACACCTAC------ATCTGACCGAAGGTCCATGGATTGAGCCAG i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 329391 44 + 643850 AATTCAGACACATGCTGGATTGATTGGCA-------CAGAGATTAGGCTAG i dasNov3.JH563638 C 0 C 0 e chlSab2.chr6 29266798 10705 + 50890351 T a score=1912496.000000 s hg38.chr19_GL383574v1_alt 68535 167 + 155864 GAACATAATGGGGACCTAAGGGCCAACCTTCCATCTCCTAGCTTCCCAAGACAAGGCCTCCCTGTC-TGACTTTACCTTC--TTTTCCCTT-GGGGCTGAGTGGAAAGCGAAGTCAATTACCAATCTC-ATTATATCTGAATTTCCATTATTTTG-GAGCTGTTACTA----TG---------TTT s panTro5.chr19 36137122 167 + 61309027 GAACATAATGGGGACCTAAGGGCCCACCTTCCATCTCCTAGCTTCCCAAGACAAGGCCTCCCTGTC-TGACTTTACCTTC--TTTTCCCTT-GGGGCTGAGTGGAAAGCGAAGTCAATTACCAATCTC-ATTATATCTGAATTTCCATGATTTTG-GAGCTGTTACTA----TG---------TTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883340 167 + 64411610 GAACATAATGGGGACCTAAGGGCCCACCTTCCATCTCCTAGCTTCCCAAGACAAGGCCTCCCTGTC-TGACTTTACCTTC--TTTTCCCTT-GGGGCTGAGTGGAAAGCGAAGTCAATTACCAATCTC-ATTATATCTGAATTTCCATGATTTTG-GAGCTGTTACTA----TG---------TTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6300929 166 - 8369475 CAACATAATGGGGACCTAAGGGCCCACCTTCCATCTCCTAGCTTCCCAAGACAAGGCCTCCCTGTA-TGACTTTACCTTC--TTTTCCCTT--GGGCTGAGTGGAAAGCGAAGTCAATTACCAATCTC-ATTATATCTGAATTTCCATTATTTTG-GAGCTGTTACTA----TG---------TTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893206 168 - 106955855 CAACATAATGGGGACCTAAGGGCCCACTTTCCATCTCCTAGCTTCCCAAGACAAGGCCTCCCTGTC-TGACTTTACCTTC--TTTTCCTTTGGGGGCTGAGTGGAAAGCAAAGTCAATTACCAATCTC-ATTTTATCTGAATTTCCATTATTTTG-GAGCTGTTACTA----TG---------TTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205320 167 + 53671032 CAACCTAATGGGGACCTAAGGGCCCACCTTCCATCTCTTAGCTTCCCAAGACAAGGCCTCCCTGTC-TGACTTTACCTTC--TTTTCCCTT-GGGGCTGAGTGGAAAGCGAAGTCAATTACCAATCTC-ATTATATCTGAATTTCCATTATATTG-GGGCTGTTACTA----TG---------TTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659033 167 + 59248254 CAACCTAATGGGGACCTAAGGGCCCACCTTCCATCTCTTAGCTTCCCAAGACAAGGCCTCCCTGTC-TGACTTTACCTTC--TTTTCCCTT-GGGGCTGAGTGGAAAGCGAAGTCAATTACCAATCTC-ATTATATCTGAATTTCCATTATATTG-GGGCTGTTACTA----TG---------TTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525228 167 - 13342542 CAACCTAATGGGGACCTAAGGGCCCACCTTCCATCTCTTAGCTTCCCAAGACAAGGCCTCCCTGTC-TGACTTTACCTTC--TTTTCCCTT-GGGGCTGAGTGGAAAGCGAAGTCAATTACCAATCTC-ATTATATCTGAATTTCCATTATATTG-GGGCTGTTACTA----TG---------TTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455779 167 + 7714307 CAACCTAATGGGGACCTAAGGGCCCACCTTCCATCTCTTAGCTTCCCAAGACAAGGCCTCCCTGTC-TGACTTTACCTTC--TTTTCCCTT-GGGGCTGAGTGGAAAGCGAAGTCAATTACCAATCTC-ATTATATCTGAATTTCCATTATATTG-GGGCTGTTACTA----TG---------TTT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 886921 167 - 2385121 CAACCTAATGGGGACCTAAGGGCCCACCTTCCATCTCTTAGCTTCCCAAGACAAGGCCTCCCTGTC-TGACTTTACCTTC--TTTTCCCTT-GGGGCTGAGTGGAAAGCGAAGTCAATTACCAATCTC-ATTATATCTGAATTTCCATTATATTG-GGGCTCTTACTA----TG---------TTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326200 167 + 4274983 CAACCTAATGGGGACCTAAGGGCCCACCTTCCATCTCTTAGCTTCCCAAGACAAGGCCTCCCTGTC-TGACTTTACCTTC--TTTTCTCTT-GGGGCTGAGTGGAAAGCGAAGTCAATTACCAATCTC-ATTATATCTGAATTTCCATTATATTG-GGGCTGTTACTA----TG---------TTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557001 177 + 49145316 CAGCATAATGGGGACCCAAGGGCCCACCTTCCATCTCCTAGCTTCCTGAGATAAGGTCCTCCTGTC-TGGCGTTGTCTTCTTTTTTCCCTT-GGGACTGAGTGGAAAGCGAAGTCAG-TACCAATCTC-ATGATATCTGAATTTACATTATATTG-GGGCTGTTATTA----TGTTTCTATGTTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5400939 172 + 8899380 CAGCATAATGGGGACCCAAGGGCCCACCTTCCATCTCCTAGCTTCCTGAGATAAGGTCTTCCTGTC-TGGCGTTGTCTTCTTTTTTCCCTT-GGGACTGAGTGGAAAGCGAAGCCAG-TACCAATCTC-ATTATATCTGAATTTCCATTATATTG-GGGCTGTTACTA----TGTTTC-----TTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609431 177 - 2680843 CAGCATAATGGGGACCCAAGGGCCCATCTTCCATCTCCTAGCTTCCTGAGATAAGGTCTTCCTGTC-TGGCGTTGTCTTCCTTTTTCCCTT-GGGACTGAGTGGAAAGCGAAGTCAG-TACCAATCTC-ATTTTATCTGAATTTCCATTATATTG-GGGCTGTTACTA----TGTTTCTTTGTTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358317 173 - 4471408 CAGCATAATGGGGACCCAAGGGCCCACCTTCCATCTCCTAGCTTCCTGAGATAAGGTCTTCCTGTC-TGGCGTTGTCTTCTTTTTTCCCTT-GGGACTGAGTGGAGAGCGAAGTCAG-TATCAATCTC-ATTATAGCTGAATTTCCATTATATTG-GCGCTGTTACTA----TGTTT----GTTTT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 575652 166 + 2501019 TAGCGTACTGGTGACCCAGGGGTCCACCCTCCGTCTCCTAGCTTCCCAAGACAA-GTTACCCTGTC-TCGCTTTGCCCTC--TTTTCCACT-GGGGCTAAGTGGAAAGTGGAGTCAGTTACCAGTCTC-ATTATATCTGAATTGGCATTGTGTTG-GGGCTGTTACCA----TG---------TTT i proCoq1.NW_012149263v1 C 0 I 41 s otoGar3.GL873654 5475890 167 + 5549422 AAGCATACTGGTGGCTCAGAGACCTATCTTCCAGCTTCCAGCTTCCTGAGACAAGGTTTCACTGCCTTTGCTTTGTCCTC--TTTAACA-T-GGGGCAGAGTGGAAAGTGAAGTCAATTTCCATTCTC-ATTATATCAGAATTTTCATTTTATTG-GAGCCATTATCC----TG---------TTT i otoGar3.GL873654 C 0 I 4 s mm10.chr7 111089382 129 - 145441459 ------------GATACTAGGACC-----TCCATCTCT-----------ACCAAGGCTTTCCCTAC-CAGCTCTGTCCTC--TCTTC---T-GTGGCTT------GAGTGAAATCAATCACAAGTC-C-TTTGGGTCTTAATTATCTTCATATGA-AAGCCTTTAGCA----TC---------ttt i mm10.chr7 C 0 C 0 s canFam3.chr1 4609213 169 - 122678785 --GAGTACTAGAGACTCGGGGACTTACTCTCCTGCTCCCAGCTTCCTGAGACAAGAGTTCCCTCTCTTGGCTTTGTCCTC--TCATA--TT-GGGGCTGAGAGAAAAGTAGAGTCAATTGCCAATCCT-ATTATATTTGAATTCCTGTTATATTGAGGGTTGTTACGAATTTTG---------TTT i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 329435 158 + 643850 GAACATACTGAGGACTACGGAACTCACCCTCCAT----TAGCTTCCTGAGACTGGGTTTCCCT----TGGCTTTGCCCTT--TCTTCCACT-GGAGCTAAGTGGAGCATGAAGTCAACTGACAATCTCAATTTTATCTGAATTCCCGTTATATTT-TGTCTGTTA-------TG---------TTT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3958392 192 - 30143674 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=23874.000000 s hg38.chr19_GL383574v1_alt 68702 3 + 155864 ATC s panTro5.chr19 36137289 3 + 61309027 ATC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883507 3 + 64411610 ATC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301095 3 - 8369475 ATC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893374 3 - 106955855 ATC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205487 3 + 53671032 AGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659200 3 + 59248254 AGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525395 3 - 13342542 AGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455946 3 + 7714307 AGC i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 887088 3 - 2385121 AGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326367 3 + 4274983 AGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557178 3 + 49145316 ATC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5401111 3 + 8899380 ATC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609608 3 - 2680843 ATC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358490 3 - 4471408 ATC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5476061 3 + 5549422 ATT i otoGar3.GL873654 I 4 C 0 s mm10.chr7 111089511 2 - 145441459 -tt i mm10.chr7 C 0 I 35 s canFam3.chr1 4609383 3 - 122678785 ATC i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 329593 3 + 643850 ATT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 575818 41 + 2501019 I e micMur3.chr22 3958392 192 - 30143674 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=585910.000000 s hg38.chr19_GL383574v1_alt 68705 49 + 155864 AGGTGT---ATTTGCAAGAAACTAATGTCAGTCATGTGTTCACATGAAGTTT s panTro5.chr19 36137292 49 + 61309027 AGGTGT---ATTTGCAAGAAACTAATGTCAGTCATGTGTTCACATGAAGTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883510 49 + 64411610 AGGTGT---ATTTGCAAGAAACTAATGTCAGTCATGTGTTCACATGAAGTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301098 49 - 8369475 AGGTGT---ATTTGCAAGAAACTAATGTCAGTCATGTGTTCACATGAAGTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893377 49 - 106955855 AGGTTT---ATTTGCAAGAAACTAATGTCAGTCATGTGTTGACATGAAGTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205490 49 + 53671032 AGGTGT---ATTTGCAAGAAACTAATGTCAGTCATGTGTTCACATGAAGTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659203 49 + 59248254 AGGTGT---ATTTGCAAGAAACTAATGTCAGTCATGTGTTCACATGAAGTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525398 49 - 13342542 AGGTGT---ATTTGCAAGAAACTAATGTCAGTCATGTGTTCACATGAAGTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455949 49 + 7714307 AGGTGT---ATTTGCAAGAAACTAACGTCAGTCATGTGTTCACATGAAGTTT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 887091 49 - 2385121 AGGTGT---ATTTGCAAGAAACTAACGTCAGTCATGTGTTCACATGAAGTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326370 49 + 4274983 AGGTGT---ATTTGTAAGAAACTAATGTCAGTCATGTGTTCGCATGAAGTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557181 49 + 49145316 AGGTGT---ATTTGCAAGAAACTAATATCAGTCATGTGTTCACATGAAGttt i calJac3.chr22 C 0 I 309 s saiBol1.JH378197 5401114 49 + 8899380 AGGTGT---ATTTGCAAGAAACTAATATCAGTCATGTGTTCACATGAAGTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609611 49 - 2680843 AGGTGT---ATTTGCAAGAAACTAATATCAGTCATGTGTTCACATGAAGTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358493 49 - 4471408 AGGTGT---ATTTGCAAGAAACTAATATCAGTCATGTGTTCATATGAAGTTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5476064 52 + 5549422 GGCTGTTTCATTTGCAAGAAACTGGTATCAGTTATATGTTCACATGAAGTTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4609386 49 - 122678785 AGCTAT---ATTTGAAAGAAATTAATACTGGTCGTATTTTCACATGAAGTTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 329596 49 + 643850 AACTGT---ATTTGCAAGAATAGACTCTAGTCCTAATATTCACATGAAGTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 575818 41 + 2501019 I e micMur3.chr22 3958392 192 - 30143674 I e mm10.chr7 111089513 35 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=203147.000000 s hg38.chr19_GL383574v1_alt 68754 19 + 155864 AACAGAATATTACAGGAAC s panTro5.chr19 36137341 19 + 61309027 AACAGAATATTACAGGAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883559 19 + 64411610 AACAGAATATTACAGGAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301147 19 - 8369475 AACAGAGTATTACAGGAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893426 19 - 106955855 AACAGAATATTATAGGAAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205539 19 + 53671032 AACAGAATATTATAGGAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659252 19 + 59248254 AACAGAATATTATAGGAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525447 19 - 13342542 AACAGAATATTATAGGAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5455998 19 + 7714307 AACAGAGTATTATAGGAAC i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 887140 19 - 2385121 AACAGAGTATTATAGGAAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326419 19 + 4274983 AACAGAATATTATAGGAAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557539 19 + 49145316 AACAGAATATTATAGGAAC i calJac3.chr22 I 309 C 0 s saiBol1.JH378197 5401163 19 + 8899380 AACAGAATATTATAGGAAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609660 19 - 2680843 AATAGAATATTATAGGAAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358542 19 - 4471408 AACAGAATATTATAGGAAC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5476116 19 + 5549422 CAGGGAATGTTGTAGAAAC i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 329645 19 + 643850 AACAGAATCTTAGAGAAAC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 575818 41 + 2501019 I e micMur3.chr22 3958392 192 - 30143674 I e mm10.chr7 111089513 35 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T e canFam3.chr1 4609435 0 - 122678785 C a score=277846.000000 s hg38.chr19_GL383574v1_alt 68773 28 + 155864 ATATTGAACTCATATGCCATGAACAACT s panTro5.chr19 36137360 28 + 61309027 ATATTGAACTCATATGCCATGAACAACT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883578 28 + 64411610 ATATTGAACTCATATGCCATGAACAACT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301166 28 - 8369475 ATATTGAACTCATATGCCATGAACAACT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893445 28 - 106955855 ACATTGAACTCATATGCCATGAGCAACT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205558 28 + 53671032 ATATTGAACTCATATGCCTTGGACAACT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659271 28 + 59248254 ATATTGAACTCATATGCCTTGGACAACT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525466 28 - 13342542 ATATTGAACTCATATGCCTTGGACAACT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456017 28 + 7714307 ATATTGAACTCATATGCCTTGGACAACT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 887159 28 - 2385121 ATATTGAACTCATATGCCTTGGACAACT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326438 28 + 4274983 ATACTGAACTCATATGTTTTGGACAACT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557558 28 + 49145316 ATATTGAACTCATATGCCATGAACAGCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5401182 28 + 8899380 ATATTGAAATCATGTGCCATGAACAGCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609679 28 - 2680843 ATATTGAACTCATATGCCATGAACAGCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358561 28 - 4471408 ATATTGAACTCATATGCCATGAACAGCT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 575859 28 + 2501019 ATATTGAACTCGTGTGCCATGGCCATCT i proCoq1.NW_012149263v1 I 41 C 0 s otoGar3.GL873654 5476135 21 + 5549422 ATATTGAACTCATATGCCATG------- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4609435 7 - 122678785 ---------------------AACAATT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 329664 17 + 643850 ATATTTAGCTTATAACC----------- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3958392 192 - 30143674 I e mm10.chr7 111089513 35 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T a score=83587.000000 s hg38.chr19_GL383574v1_alt 68801 8 + 155864 CGTGATAA s panTro5.chr19 36137388 8 + 61309027 CGTGATAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883606 8 + 64411610 CGTGATAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301194 8 - 8369475 TGTGATAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893473 8 - 106955855 CGTGATAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205586 8 + 53671032 TGTGATAA i rheMac8.chr19 C 0 I 3 s macFas5.chr19 34659299 8 + 59248254 TGTGATAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525494 8 - 13342542 TGTGATAA i macNem1.NW_012011689v1 C 0 I 3 s cerAty1.NW_012005268v1 5456045 8 + 7714307 TGTGATAA i cerAty1.NW_012005268v1 C 0 I 3 s manLeu1.NW_012102454v1 887187 8 - 2385121 TGTGATAA i manLeu1.NW_012102454v1 C 0 I 3 s colAng1.NW_012111697v1 2326466 8 + 4274983 TGTGATAA i colAng1.NW_012111697v1 C 0 I 3 s calJac3.chr22 28557586 8 + 49145316 TGTGATAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5401210 8 + 8899380 TGTGATAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609707 8 - 2680843 TGTGACAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358589 8 - 4471408 TGTGATAA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 575887 8 + 2501019 TGTGATAA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5476156 5 + 5549422 ---GATAA i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 329681 5 + 643850 CGTGG--- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3958392 192 - 30143674 I e mm10.chr7 111089513 35 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T e canFam3.chr1 4609442 0 - 122678785 C a score=15510.000000 s hg38.chr19_GL383574v1_alt 68809 3 + 155864 CTT s panTro5.chr19 36137396 3 + 61309027 CTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883614 3 + 64411610 CTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301202 3 - 8369475 CTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893481 3 - 106955855 CTT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28557594 3 + 49145316 CTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5401218 3 + 8899380 CTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609715 3 - 2680843 CTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358597 3 - 4471408 CTT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 575895 3 + 2501019 CTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5476161 3 + 5549422 CTT i otoGar3.GL873654 C 0 I 9 e micMur3.chr22 3958392 192 - 30143674 I e dasNov3.JH563638 329686 0 + 643850 C e mm10.chr7 111089513 35 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T e canFam3.chr1 4609442 0 - 122678785 C e colAng1.NW_012111697v1 2326474 3 + 4274983 I e manLeu1.NW_012102454v1 887195 3 - 2385121 I e cerAty1.NW_012005268v1 5456053 3 + 7714307 I e macNem1.NW_012011689v1 4525502 3 - 13342542 I e macFas5.chr19 34659307 0 + 59248254 C e rheMac8.chr19 30205594 3 + 53671032 I a score=1911.000000 s hg38.chr19_GL383574v1_alt 68812 1 + 155864 A s panPan2.chr19 39883617 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301205 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893484 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s cebCap1.NW_016107633v1 1609718 1 - 2680843 A i cebCap1.NW_016107633v1 C 0 I 1 s aotNan1.NW_018505377v1 358600 1 - 4471408 A i aotNan1.NW_018505377v1 C 0 I 43 s proCoq1.NW_012149263v1 575898 1 + 2501019 A i proCoq1.NW_012149263v1 C 0 C 0 e micMur3.chr22 3958392 192 - 30143674 I e dasNov3.JH563638 329686 0 + 643850 C e otoGar3.GL873654 5476164 9 + 5549422 I e mm10.chr7 111089513 35 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T e canFam3.chr1 4609442 0 - 122678785 C e saiBol1.JH378197 5401221 0 + 8899380 C e calJac3.chr22 28557597 0 + 49145316 C e colAng1.NW_012111697v1 2326474 3 + 4274983 I e manLeu1.NW_012102454v1 887195 3 - 2385121 I e cerAty1.NW_012005268v1 5456053 3 + 7714307 I e macNem1.NW_012011689v1 4525502 3 - 13342542 I e macFas5.chr19 34659307 0 + 59248254 C e rheMac8.chr19 30205594 3 + 53671032 I e panTro5.chr19 36137399 0 + 61309027 C a score=9521.000000 s hg38.chr19_GL383574v1_alt 68813 10 + 155864 GATAAGATGC s panTro5.chr19 36137399 6 + 61309027 ----AGATGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883618 10 + 64411610 GATAAGATGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301206 10 - 8369475 GATAAGATGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893485 10 - 106955855 GATAAGATGC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34659307 3 + 59248254 ---GAG---- i macFas5.chr19 C 0 C 0 s calJac3.chr22 28557597 6 + 49145316 ----AAATGC i calJac3.chr22 C 0 T 373 s proCoq1.NW_012149263v1 575899 10 + 2501019 GATGAGATGC i proCoq1.NW_012149263v1 C 0 I 3 e micMur3.chr22 3958392 192 - 30143674 I e dasNov3.JH563638 329686 0 + 643850 C e otoGar3.GL873654 5476164 9 + 5549422 I e mm10.chr7 111089513 35 - 145441459 I e chlSab2.chr6 29266798 10705 + 50890351 T e canFam3.chr1 4609442 0 - 122678785 C e aotNan1.NW_018505377v1 358601 43 - 4471408 I e cebCap1.NW_016107633v1 1609719 1 - 2680843 I e saiBol1.JH378197 5401221 0 + 8899380 C e colAng1.NW_012111697v1 2326474 3 + 4274983 I e manLeu1.NW_012102454v1 887195 3 - 2385121 I e cerAty1.NW_012005268v1 5456053 3 + 7714307 I e macNem1.NW_012011689v1 4525502 3 - 13342542 I e rheMac8.chr19 30205594 3 + 53671032 I a score=577.000000 s hg38.chr19_GL383574v1_alt 68823 3 + 155864 ttt s gorGor5.CYUI01015150v1 6301216 2 - 8369475 -tt i gorGor5.CYUI01015150v1 C 0 C 0 s mm10.chr7 111089548 3 - 145441459 ttt i mm10.chr7 I 35 C 0 e proCoq1.NW_012149263v1 575909 3 + 2501019 I e micMur3.chr22 3958392 192 - 30143674 I e dasNov3.JH563638 329686 0 + 643850 C e otoGar3.GL873654 5476164 9 + 5549422 I e chlSab2.chr6 29266798 10705 + 50890351 T e canFam3.chr1 4609442 0 - 122678785 C e aotNan1.NW_018505377v1 358601 43 - 4471408 I e cebCap1.NW_016107633v1 1609719 1 - 2680843 I e saiBol1.JH378197 5401221 0 + 8899380 C e calJac3.chr22 28557603 373 + 49145316 T e colAng1.NW_012111697v1 2326474 3 + 4274983 I e manLeu1.NW_012102454v1 887195 3 - 2385121 I e cerAty1.NW_012005268v1 5456053 3 + 7714307 I e macNem1.NW_012011689v1 4525502 3 - 13342542 I e macFas5.chr19 34659310 0 + 59248254 C e rheMac8.chr19 30205594 3 + 53671032 I e nomLeu3.chr10 63893495 0 - 106955855 C e panPan2.chr19 39883628 0 + 64411610 C e panTro5.chr19 36137405 0 + 61309027 C a score=6430.000000 s hg38.chr19_GL383574v1_alt 68826 5 + 155864 ttttt s panTro5.chr19 36137405 4 + 61309027 -tttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883628 3 + 64411610 --ttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301218 5 - 8369475 ttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893495 3 - 106955855 --ttt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28557230 5 + 49145316 ttttc i calJac3.chr22 T 373 C 0 s proCoq1.NW_012149263v1 575912 5 + 2501019 TTTTT i proCoq1.NW_012149263v1 I 3 I 63 s mm10.chr7 111089551 5 - 145441459 tgttt i mm10.chr7 C 0 C 0 e micMur3.chr22 3958392 192 - 30143674 I e dasNov3.JH563638 329686 0 + 643850 C e otoGar3.GL873654 5476164 9 + 5549422 I e chlSab2.chr6 29266798 10705 + 50890351 T e canFam3.chr1 4609442 0 - 122678785 C e aotNan1.NW_018505377v1 358601 43 - 4471408 I e cebCap1.NW_016107633v1 1609719 1 - 2680843 I e saiBol1.JH378197 5401221 0 + 8899380 C e colAng1.NW_012111697v1 2326474 3 + 4274983 I e manLeu1.NW_012102454v1 887195 3 - 2385121 I e cerAty1.NW_012005268v1 5456053 3 + 7714307 I e macNem1.NW_012011689v1 4525502 3 - 13342542 I e macFas5.chr19 34659310 0 + 59248254 C e rheMac8.chr19 30205594 3 + 53671032 I a score=3822.000000 s hg38.chr19_GL383574v1_alt 68831 2 + 155864 tt s panTro5.chr19 36137409 2 + 61309027 tt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883631 2 + 64411610 tt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301223 2 - 8369475 tt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893498 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28557235 2 + 49145316 tt i calJac3.chr22 C 0 C 0 s mm10.chr7 111089556 2 - 145441459 tt i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 575917 63 + 2501019 I e micMur3.chr22 3958392 192 - 30143674 I e dasNov3.JH563638 329686 0 + 643850 C e otoGar3.GL873654 5476164 9 + 5549422 I e chlSab2.chr6 29266798 10705 + 50890351 T e canFam3.chr1 4609442 0 - 122678785 C e aotNan1.NW_018505377v1 358601 43 - 4471408 I e cebCap1.NW_016107633v1 1609719 1 - 2680843 I e saiBol1.JH378197 5401221 0 + 8899380 C e colAng1.NW_012111697v1 2326474 3 + 4274983 I e manLeu1.NW_012102454v1 887195 3 - 2385121 I e cerAty1.NW_012005268v1 5456053 3 + 7714307 I e macNem1.NW_012011689v1 4525502 3 - 13342542 I e macFas5.chr19 34659310 0 + 59248254 C e rheMac8.chr19 30205594 3 + 53671032 I a score=272394.000000 s hg38.chr19_GL383574v1_alt 68833 54 + 155864 ttttttttgagatggagtttcgctct---tgtcacccagact---gtagtgcagtggctc s panTro5.chr19 36137411 54 + 61309027 ttttttttgagatggagtttcgctgt---tgtcacccagact---gtagtgcagtggctc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883633 54 + 64411610 ttttttttgagatggagttttgctgt---tgtcacccagact---gtagtgcagtggctc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301225 57 - 8369475 ttttttttgagatggagtttccctct---tgtcacccagactgtagtagtgcagtggctc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893500 54 - 106955855 ttttttttgagacggagcttcgttct---tgtcacccagact---ggagtgcagtggcgc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205597 54 + 53671032 ttttttttgaaacggagttttgctct---tgtcacccaggct---ggagtgcagtggcgc i rheMac8.chr19 I 3 C 0 s macFas5.chr19 34659310 54 + 59248254 ttttttttgaaacggagttttgctct---tgtcacccaggct---ggagtgcagtgacgc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525505 54 - 13342542 ttttttttgaaacggagttttgctct---tgtcacccaggct---ggagtgcagtggcgc i macNem1.NW_012011689v1 I 3 C 0 s cerAty1.NW_012005268v1 5456056 54 + 7714307 ttttttttgaaatggagttttgctct---tgtcacccaggct---ggagtgcagtggcgt i cerAty1.NW_012005268v1 I 3 C 0 s manLeu1.NW_012102454v1 887198 54 - 2385121 ttttttttgaaatggagttttgctct---tgtcacccaggct---ggagtgcagtggcgt i manLeu1.NW_012102454v1 I 3 C 0 s colAng1.NW_012111697v1 2326477 54 + 4274983 ttttttttgaaacggagttttgctct---tgtcacccaggct---ggagtgtagtggcgc i colAng1.NW_012111697v1 I 3 C 0 s calJac3.chr22 28557237 54 + 49145316 ttttttttgagacggagtttcgctct---tgttacccaggct---ggagtgctatggcgc i calJac3.chr22 C 0 C 0 s mm10.chr7 111089558 54 - 145441459 gttttttcgagacagggtttttttctctgtgtagccctggct------gtcctggaactc i mm10.chr7 C 0 C 0 s dasNov3.JH563638 329686 7 + 643850 -----------------------------------------------------GTAGCTC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 575917 63 + 2501019 I e micMur3.chr22 3958392 192 - 30143674 I e otoGar3.GL873654 5476164 9 + 5549422 I e chlSab2.chr6 29266798 10705 + 50890351 T e canFam3.chr1 4609442 0 - 122678785 C e aotNan1.NW_018505377v1 358601 43 - 4471408 I e cebCap1.NW_016107633v1 1609719 1 - 2680843 I e saiBol1.JH378197 5401221 0 + 8899380 C a score=392232.000000 s hg38.chr19_GL383574v1_alt 68887 73 + 155864 gatct-cgactcactgcaacctccacctcccaggttcaggtg----attctcctgcctcaa-ccccccaagtagctggg s panTro5.chr19 36137465 74 + 61309027 gatct-tgactcactgcaacctccacctcccaggttcaggtg----attctcctgcctcaacccccccaagtagctggg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883687 73 + 64411610 gatct-tgactcactgcaacctccacctcccaggttcaggtg----attctcctgcctcaa-ccccccaagtagctggg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301282 73 - 8369475 gatct-cgactcactgcaacctccacctcccaggttcaggtg----attctcctgcctcag-ccccctaagtagctggg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893554 73 - 106955855 aatct-cgactcactgcaacctccacctcccaggttcaagtg----attatcctgcctcag-cctcccaagtagctggg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205651 73 + 53671032 gatct-caactcactgcaacctccacctcccaggttcaagtg----attctcctgcatcag-ccttccgagtagctggg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659364 73 + 59248254 gatct-caactcactgcaacctccacctcccaggttcaagtg----attctcctgcatcag-ccttccgagtagctggg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525559 73 - 13342542 gatct-caactcactgcaacctccacctcccaggttcaagtg----attctcctgcatcag-ccttccgagtagctggg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456110 73 + 7714307 gatct-caactcactgcaacctccacctcccaggttcaagtg----attctcctgcatcag-ccttccaagtagctggg i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 887252 73 - 2385121 gatct-caactcactgcaacctccacctcccaggttcaagtg----attctcctgcatcag-ccttccaagtagctggg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326531 77 + 4274983 gatct-caactcactgcaacctccacctcccaggttcaagtgattcattctcctgcatcag-ccttccgagtagctgga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557291 72 + 49145316 aatct-cggctcaccacaacctccgcctcctgggttcaggca----attctcctgtctcag-cctcct-agtagctggg i calJac3.chr22 C 0 C 0 s mm10.chr7 111089612 64 - 145441459 actctgtagaccaggctggcctcaaactc---------agaa----acctgcttgcctctg-cctcccaagtc-ctggg i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 575917 63 + 2501019 I e micMur3.chr22 3958392 192 - 30143674 I e dasNov3.JH563638 329693 0 + 643850 C e otoGar3.GL873654 5476164 9 + 5549422 I e chlSab2.chr6 29266798 10705 + 50890351 T e canFam3.chr1 4609442 0 - 122678785 C e aotNan1.NW_018505377v1 358601 43 - 4471408 I e cebCap1.NW_016107633v1 1609719 1 - 2680843 I e saiBol1.JH378197 5401221 0 + 8899380 C a score=385120.000000 s hg38.chr19_GL383574v1_alt 68960 70 + 155864 attacaggcacctgccaccat-gcccagcta---ttt-----------tttgtatttttggtagagaatgagtttcaccattttg s panTro5.chr19 36137539 70 + 61309027 attacaggcacctgccaccac-gcccagcta---ttt-----------tttgtatttttggtagagaacgagtttcaccattttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883760 70 + 64411610 attacaggcacctgccaccac-gcccagcta---ttt-----------tttgtatttttggtagagaacgagtttcaccattttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301355 70 - 8369475 attacaggcacctgccaccac-gcccagcta---ttt-----------tttgtatttttggtagagaacgagtttcaccattttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893627 70 - 106955855 attacaggcgcctgccaccac-acccagcta---ttt-----------tttgtatttttggtagagaccgagtttcatcattttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205724 70 + 53671032 attacaggcgcctgccaccac-acccagctg---ttt-----------tttgtatttttgatagagacggagtttcaccattttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659437 70 + 59248254 attacaggcgcctgccaccac-acccagctg---ttt-----------tttgtatttttgatagagacggagtttcaccattttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525632 70 - 13342542 attacaggcacctgccaccac-acccagctg---ttt-----------tttgtatttttgatagagacggagtttcaccattttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456183 70 + 7714307 attacaggcgcctgccaccac-acccagctg---ttt-----------tttgtatttttgatagagacggagtttcaccattttg i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 887325 70 - 2385121 attacaggcgcctgccaccac-acccagctg---ttt-----------tttgtatttttgatagagacggagtttcaccattttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326608 70 + 4274983 attacaagcgcctgccaccac-acccagcta---ttt-----------tttgtatttttgatagagatggagtttcaccattttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557363 73 + 49145316 attacaggcacgcgccaccat-gcccagctaattttt-----------tttgtatttttagtagagacggggtttcaccatgttg i calJac3.chr22 C 0 C 0 s mm10.chr7 111089676 79 - 145441459 attaaaggcgtgcgccaccactgcccagctC---TTTAGCATCTATCAATTGTATTT---ATAAGAAACAAGCCTCTGTGTCATG i mm10.chr7 C 0 C 0 s canFam3.chr1 4609442 37 - 122678785 ATTATGGGAGCGTATTGCCAT-GGACAG------TTT-----------GTGATGA------------------------------ i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 575917 63 + 2501019 I e micMur3.chr22 3958392 192 - 30143674 I e dasNov3.JH563638 329693 0 + 643850 C e otoGar3.GL873654 5476164 9 + 5549422 I e chlSab2.chr6 29266798 10705 + 50890351 T e aotNan1.NW_018505377v1 358601 43 - 4471408 I e cebCap1.NW_016107633v1 1609719 1 - 2680843 I e saiBol1.JH378197 5401221 0 + 8899380 C a score=115819.000000 s hg38.chr19_GL383574v1_alt 69030 17 + 155864 gccaggctagtctcgaa s panTro5.chr19 36137609 17 + 61309027 gccaggctggtctcgaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883830 17 + 64411610 gccaggctggtctcgaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301425 17 - 8369475 gccaggctggtctcgaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893697 17 - 106955855 gccaggctggtctcgaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205794 17 + 53671032 gccaggctggtctcgaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659507 17 + 59248254 gccaggctggtctcgaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525702 17 - 13342542 gccaggctggtctcgaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456253 17 + 7714307 gccaggctggtctcgaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256093 17 + 50890351 gccaggatggtctcgat i chlSab2.chr6 T 10705 C 0 s manLeu1.NW_012102454v1 887395 17 - 2385121 gccaggctggtctcgaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326678 17 + 4274983 gccaggctggtctcgaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557436 17 + 49145316 accaggatggtctcgat i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 575917 63 + 2501019 I e micMur3.chr22 3958392 192 - 30143674 I e dasNov3.JH563638 329693 0 + 643850 C e otoGar3.GL873654 5476164 9 + 5549422 I e mm10.chr7 111089755 0 - 145441459 C e canFam3.chr1 4609479 0 - 122678785 C e aotNan1.NW_018505377v1 358601 43 - 4471408 I e cebCap1.NW_016107633v1 1609719 1 - 2680843 I e saiBol1.JH378197 5401221 0 + 8899380 C a score=335538.000000 s hg38.chr19_GL383574v1_alt 69047 71 + 155864 ctcctgacttcaggcgatccgccc-cctcggcctcccaaagtgctgggattacaggcgt-----gagccatcacgcc s panTro5.chr19 36137626 71 + 61309027 ctcctgacttcaggcgatccaccc-cctcggcctcccaaagtgctgggattacaggcgt-----gagccatcacgcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883847 71 + 64411610 ctcctgacttcaggcgatccgccc-cctcggcctcccaaagtgctgggattacaggcgt-----gagccatcacgcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301442 71 - 8369475 ctcctgacttcaggcgatccgccc-cctcggcctcccaaagtgctgggattacaggcgt-----gagccatcacgcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893714 71 - 106955855 ctcctgacctcaggcgatccgccc-cctcggcctcccaaagtgctgggattagagccgt-----gagccaccgcgcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205811 71 + 53671032 ctcctgacctcaggcgatctgccc-cctcagcctcccaaagtgctttgattacaggtgt-----gagccaccatgcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659524 71 + 59248254 ctcctgacctcaggcgatctgccc-cctcagcctcccaaagtgctttgattacaggtgt-----gagccaccatgcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525719 71 - 13342542 ctcctgacctcaggcgatctgccc-cctcagcctcccaaagtgctttgattacaggtgt-----gagccaccatgcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456270 71 + 7714307 ctcctgacctcaggcgatctgccc-cttcagcctcccaaagtgctttgattacaggtgt-----gagccaccatgcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256110 70 + 50890351 ctcctgacctcgg--gatccgcccgtctcggcctcccaaagtgctttgatgacaggtgt-----gagccaccatgcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 887412 71 - 2385121 ctcctgacctcaggcgatctgccc-cctcagcctcccaaagtgctttgattacaggtgt-----gagccaccatgcc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326695 71 + 4274983 ctcctgacctcaggcgatctgcca-cctcggcctcccaaagtgctgggattacaggctt-----gagccaccatgcc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557453 70 + 49145316 atcttgacctc--gtgatccacccgcctcggcctcccaaaatgctgggattacaggctt-----gagccaccgcacc i calJac3.chr22 C 0 C 0 s mm10.chr7 111089755 38 - 145441459 -----------------------------------TGAAAGCAT----ACTGCAGGAGTGTACAGAGCTTGCATGCC i mm10.chr7 C 0 I 8 s canFam3.chr1 4609479 2 - 122678785 --------------------------------CT------------------------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 329693 15 + 643850 CTGATGACTTGAGAC-------------------------------------------------------------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 575917 63 + 2501019 I e micMur3.chr22 3958392 192 - 30143674 I e otoGar3.GL873654 5476164 9 + 5549422 I e aotNan1.NW_018505377v1 358601 43 - 4471408 I e cebCap1.NW_016107633v1 1609719 1 - 2680843 I e saiBol1.JH378197 5401221 0 + 8899380 C a score=41716.000000 s hg38.chr19_GL383574v1_alt 69118 6 + 155864 tagccA s panTro5.chr19 36137697 6 + 61309027 tagccA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883918 6 + 64411610 tagccA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301513 6 - 8369475 tagccA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893785 6 - 106955855 tggccA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205882 6 + 53671032 tggccA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659595 6 + 59248254 tggccA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525790 6 - 13342542 tggccA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456341 6 + 7714307 tggccA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256180 6 + 50890351 tggccA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 887483 6 - 2385121 tggccA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326766 6 + 4274983 tggccA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557523 6 + 49145316 cggccA i calJac3.chr22 C 0 I 68 s otoGar3.GL873654 5476173 6 + 5549422 TAGATA i otoGar3.GL873654 I 9 C 0 s mm10.chr7 111089801 6 - 145441459 TGGGAG i mm10.chr7 I 8 I 5 s canFam3.chr1 4609481 6 - 122678785 TAGATA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 329708 1 + 643850 -----A i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 575917 63 + 2501019 I e micMur3.chr22 3958392 192 - 30143674 I e aotNan1.NW_018505377v1 358601 43 - 4471408 I e cebCap1.NW_016107633v1 1609719 1 - 2680843 I e saiBol1.JH378197 5401221 0 + 8899380 C a score=25022.000000 s hg38.chr19_GL383574v1_alt 69124 2 + 155864 AG s panTro5.chr19 36137703 2 + 61309027 AG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883924 2 + 64411610 AG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301519 2 - 8369475 AG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893791 2 - 106955855 AG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205888 2 + 53671032 AG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659601 2 + 59248254 AG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525796 2 - 13342542 AG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456347 2 + 7714307 AG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256186 2 + 50890351 AG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 887489 2 - 2385121 AG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326772 2 + 4274983 AG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557597 2 + 49145316 AA i calJac3.chr22 I 68 C 0 s saiBol1.JH378197 5401221 2 + 8899380 AA i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5476179 2 + 5549422 AG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111089812 2 - 145441459 AG i mm10.chr7 I 5 I 7 s canFam3.chr1 4609487 2 - 122678785 AG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 329709 2 + 643850 AG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 575917 63 + 2501019 I e micMur3.chr22 3958392 192 - 30143674 I e aotNan1.NW_018505377v1 358601 43 - 4471408 I e cebCap1.NW_016107633v1 1609719 1 - 2680843 I a score=350719.000000 s hg38.chr19_GL383574v1_alt 69126 36 + 155864 ATGCTTATTTCT---AAT-T-AGCTTTAGTAATTACTTAGG s panTro5.chr19 36137705 36 + 61309027 ATGCTTATTTCT---AAT-T-AGCTTTAGTAATTACTTAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883926 36 + 64411610 ATGCTTATTTCT---AAT-T-AGCTTTAGTAATTACTTAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301521 36 - 8369475 ATGCTTATTTCT---AAT-T-AGCTTTAGTAATTACTTAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893793 36 - 106955855 ATGCTTATTTCT---AAT-T-AGCTTTAGTAATTACTTAGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205890 36 + 53671032 ATGCTTATTTCT---AAT-C-AGCTTTAGTAATCACTTAGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659603 36 + 59248254 ATGCTTATTTCT---AAT-C-AGCTTTAGTAATCACTTAGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525798 36 - 13342542 ATGCTTATTTCT---AAT-C-AGCTTTAGTAATCACTTAGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456349 36 + 7714307 ATGCTTATTTCT---AAT-C-AGCTTTAGTAATCACTTAGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256188 36 + 50890351 ATGCTTATTTCT---AAT-C-AGCTTTAGTAATCACTTAGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 887491 36 - 2385121 ATGCTTATTTCT---AAT-C-AGCTTTAGTAATCACTTAGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326774 36 + 4274983 ATGCTTATTTCT---AAT-C-AGCTTTAGTAATCACTTAGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557599 36 + 49145316 ATGCTTATTTCT---AAT-T-AGCTTTAGGAATTATTTAGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5401223 28 + 8899380 ATGCTTATTT-------------CTTTAGGAATTATTTAGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609720 36 - 2680843 ATGCTTATTTCT---AAT-T-AGCTTTAGGAATTATTTAGC i cebCap1.NW_016107633v1 I 1 C 0 s otoGar3.GL873654 5476181 33 + 5549422 ATACTTATTTTT---AAT-----CTTTAGGAATTACCTAAA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111089821 39 - 145441459 GCTCTTATTTCTTCAATT-G-AGCTCGAGAAATCAATTAAA i mm10.chr7 I 7 C 0 s canFam3.chr1 4609489 37 - 122678785 GTACTTATTTTT---ATTTC-ATCTTTAGGAATTACTTTAT i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 329711 37 + 643850 ATGATTGTTCTC---ATT-TGATCTTTAGGAATTACTTAAC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 575917 63 + 2501019 I e micMur3.chr22 3958392 192 - 30143674 I e aotNan1.NW_018505377v1 358601 43 - 4471408 I a score=411642.000000 s hg38.chr19_GL383574v1_alt 69162 37 + 155864 CTTAATTTGGGAG-T-AGCACTGCATATTTTGGCTGAGG s panTro5.chr19 36137741 37 + 61309027 CTTAATTTGGGAG-T-AGCACTGCATATTTTGGCTGAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883962 37 + 64411610 CTTAATTTGGGAG-T-AGCACTGCATATTTTGGCTGAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301557 36 - 8369475 CTTAATTTGGGAG-T-AGCA-TGCGTATTTTGGCTGAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893829 37 - 106955855 CTTAATCTGGGAG-T-AGCACTGCATATTTTGGCTGAGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205926 37 + 53671032 CTTAATTTGGGAA-T-AGCACTGCATATTTTGGCTGAGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659639 37 + 59248254 CTTAATTTGGGAA-T-AGCACTGCATATTTTGGCTGAGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525834 37 - 13342542 CTTAATTTGGGAA-T-AGCACTGCATATTTTGGCTGAGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456385 37 + 7714307 CTTAATTTGGGAA-T-AGCACTGCATATTTTGGCTGAGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256224 37 + 50890351 CTTAATTTGGGAA-T-AGCACTGCATATTTTGGCTGAGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 887527 37 - 2385121 CTTAATTTGGGAA-T-AGCACTGCATATTTTGGCTGAGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326810 37 + 4274983 CTTAATTTGGGAA-T-AGCACTGCATATTTTGGCTGAGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557635 37 + 49145316 TTTAATTTGGGAA-C-AGTGTTACGTATTTTGGCTGAGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5401251 37 + 8899380 CTTAATTTGGGAA-T-AGTGTTGCATATTTTGGCTGAGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609756 37 - 2680843 CTTAATTTGGGAA-T-AGTGTTGCATATTTTGGCTGAGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358644 37 - 4471408 CTTAATTTGGGAA-T-AATGTTGCATATTTTGGCTGAGT i aotNan1.NW_018505377v1 I 43 C 0 s otoGar3.GL873654 5476214 12 + 5549422 ---------------------------CTTTTGCCAAGA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111089860 36 - 145441459 -TGTGTCAGGAAT-T-GGGGCTGCATAGATTTGCTGAAA i mm10.chr7 C 0 C 0 s canFam3.chr1 4609527 38 - 122678785 CTTAATTTGGGAATT-AGTGCCACAAAGTTTTGCTGGAA i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 329748 38 + 643850 CTTAATTTGGGAA-TAAGTCCTACATATTTTTGCTAAGG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 575917 63 + 2501019 I e micMur3.chr22 3958392 192 - 30143674 I a score=53913.000000 s hg38.chr19_GL383574v1_alt 69199 4 + 155864 GATA s panTro5.chr19 36137778 4 + 61309027 GATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39883999 4 + 64411610 GATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301593 4 - 8369475 GATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893866 4 - 106955855 GATA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205963 4 + 53671032 GATA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659676 4 + 59248254 GATA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525871 4 - 13342542 GATA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456422 4 + 7714307 GATA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256261 4 + 50890351 GATA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 887564 4 - 2385121 GATA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326847 4 + 4274983 GATA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557672 4 + 49145316 GATG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5401288 4 + 8899380 GATG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609793 4 - 2680843 GATG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358681 4 - 4471408 GGTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3958584 4 - 30143674 GATG i micMur3.chr22 I 192 C 0 s otoGar3.GL873654 5476226 4 + 5549422 AATG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111089896 4 - 145441459 GATG i mm10.chr7 C 0 C 0 s canFam3.chr1 4609565 4 - 122678785 AACA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 329786 4 + 643850 AATG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 575917 63 + 2501019 I a score=2969553.000000 s hg38.chr19_GL383574v1_alt 69203 150 + 155864 TTCTTTTAAACCTGATATGCTGAAGATTATTTGCTTTTATAATAGAGAACGGAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGGGGATACAGAGGCAGAGGAGG s panTro5.chr19 36137782 150 + 61309027 TTCTTTTAAACCTGATATGCTGAAGATTATTTGCTTTTATAATAGAGAACGGAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGGGGATACAGAGGCAGAGGAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39884003 150 + 64411610 TTCTTTTAAACCTGATATGCTGAAGATTATTTGCTTTTATAATAGAGAACGGAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGGGGATACAGAGGCAGAGGAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301597 150 - 8369475 TTCTTTTAAACCTGATATGCTGAAGATTATTTGCTTTTATAATAGAGAACGGAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGGGGATACAGAGGCAGAGGAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63893870 150 - 106955855 TTCTTTTAAACCTGATATGCTGAAGATTATTTGCTTTTATAATAGAGAACGGAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGGGGATACAGAGGCAGAGGAGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30205967 150 + 53671032 TTCTTTTAAACCTGATATGCTGAAGATTATTTGCTTTTATAATAGAGAACGAAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGGGGATACAGAGGCAGAGGAGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659680 150 + 59248254 TTCTTTTAAACCTGATATGCTGAAGATTATTTGCTTTTATAATAGAGAACGAAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGGGGATACAGAGGCAGAGGAGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4525875 150 - 13342542 TTCTTTTAAACCTGATATGCTGAAGATTATTTGCTTTTATAATAGAGAACGAAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGGGGATACAGAGGCAGAGGAGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456426 150 + 7714307 TTCTTTTAAACCTGATATGCTGAAGATTATTTGCTTTTATAATAGAGAACGAAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGGGGATACAGAGGCAGAGGAGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256265 150 + 50890351 TTCTTTTAAACCTGATATGCTGAAGATTATTTGCTTTTATAATAGAGAACGAAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGGGGATACAGAGGCAGAGGAGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 887568 150 - 2385121 TTCTTTTAAACCTGATATGCTGAAGATTATTTGCTTTTATAATAGAGAGCGAAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGGGGATACAGAGGCAGAGGAGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2326851 150 + 4274983 TTCTTTTAAACCTGATATGCTGAAGATTATTTGCTTTTATAATAGAGAACGAAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGGGGATACAGAGGCAGAGGAGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557676 150 + 49145316 TTCTTTTAAGCTTGATATGCTGAAGATTATTTGCTTTTATAATAGAGAACGGAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGTCGTGGGGGATACAGAGGCAGAGGAGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5401292 150 + 8899380 TTGTTTTAAGCCTGATATGCTGATGATTATTTGCTTTTATAATAGGGAACGGAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGTCGTGGGGGATACAGAGGCAGAGGAGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609797 150 - 2680843 TTCTTTTAAGCCTGATATGCTGAAGATTATTTGCTTTTATAATAGAGAACGGAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGTCGTGGGGGATACAGAGGCAGAGGAGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358685 150 - 4471408 TTCTTTTAAGCCTGATATGCTGAAGATTATTTGCTTTTATAATAGAGAACGGAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGTCGTGGGGGATACAGAGGCAGAGGAGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3958588 150 - 30143674 TTCTTTTAAACCTGGTATGCTAAAGATCATTTGCTTTTATAATAGAGAACGAAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGCGGGTACAGAGGCAGAGGAGG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 575980 150 + 2501019 TTCTTTTAAATCTGATCTGCTGAAAATCATTTGCTTTTATAATAGAGAACGAAGACCAACCTGGGCTGAAGAGAGAAGATTAAACGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGCGGGTACAGAGGCAGAGGAGG i proCoq1.NW_012149263v1 I 63 M 3945 s otoGar3.GL873654 5476230 150 + 5549422 TTCTTTTAAACCTGATACACTGAAGATTATTTGCTTTTATGATAGAGAACGAAGACCAACATGGGCTGAAGAGAGGAGATTGAATGCAGAAACGTTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGCGGGTACAGAGGCAGAGGAAG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111089900 147 - 145441459 CACTTTTTGGGTTGATGTGCTAATGTCCCT---CTTACATAACAGAGAAAGGAGACCAACTTGGGCTGAAGAAAGAAGGTTAAATGCTGAAACTTTTGGCATCCCGCTTCGTCCAAACCGTGGCCGTGGAGGCTACCGAGGCAGAGGAGG i mm10.chr7 C 0 C 0 s canFam3.chr1 4609569 149 - 122678785 -TTCTTAAAATGTCATACACTAGAGATTATTTGTTCTTCTAACAGAGAACGGAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGTCGTGGAGGGTACAGAGGCAGAGGAGG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 329790 149 + 643850 TTCTTTTAAACCTGATTTGTTGAAGACC-TTTGTTCTTATAATAGAGAACGCAGACCAACCTGGGCTGAAGAAAGAAGGTTAAATGCTGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGAGGGTACAGAGGCAGAGGCGG i dasNov3.JH563638 C 0 C 0 a score=2502584.000000 s hg38.chr19_GL383574v1_alt 69353 133 + 155864 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTCACTGCCCCTCGAGGATTTCGCGGTGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCGGATTTTGAATATAGGGTAAGT s panTro5.chr19 36137932 133 + 61309027 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTCACTGCCCCTCGAGGATTTCGCGGTGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39884153 133 + 64411610 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTCACTGCCCCTCGAGGATTTCGCGGTGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301747 133 - 8369475 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTCACTGCCCCTCGAGGATTTCGCGGTGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63894020 133 - 106955855 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTCACTGCCCCTCGAGGATTTCGTGGAGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30206117 133 + 53671032 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTCACTGCCCCTCGAGGATTTCGAGGTGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659830 133 + 59248254 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTCACTGCCCCTCGAGGATTTCGAGGTGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4526025 133 - 13342542 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTCACTGCCCCTCGAGGATTTCGAGGTGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456576 133 + 7714307 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTCACTGCCCCTCGAGGATTTCGGGGTGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256415 133 + 50890351 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTCACTGCCCCTCGAGGATTTCGAGGTGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 887718 133 - 2385121 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTCACTGCCCCTCGAGGATTTCGAGGTGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2327001 133 + 4274983 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTTACTGCCCCTCGAGGATTTCGAGGTGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557826 133 + 49145316 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTCACTGCCCCTCGAGGATTTCGTGGTGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5401442 133 + 8899380 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTCACTGCCCCTCGAGGATTTCGTGGTGGATTCAGAGGAGGCCGTGGGGGCCGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1609947 133 - 2680843 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTCACTGCCCCTCGAGGATTTCGTGGTGGATTCAGAGGAGGTCGTGGGGGTCGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358835 133 - 4471408 TCTTGGTTTCCgtggtggtagagggcgtggtggtggcagaggtggtACCTTCACTGCCCCTCGAGGATTTCGTGGTGGATTCAGAGGAGGTCGTGGGGGCCGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3958738 133 - 30143674 TCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACCTTCACCACCCCTCGAGGATTTCGTGGTGGATTCAGAGGAGGTCGAGGGGGCAGGGAGTTTGCAGATTTTGAATATAGGGTAAGT i micMur3.chr22 C 0 I 608 s otoGar3.GL873654 5476380 132 + 5549422 TCTTGGTTTCCGTGGTGGCAGAGGGCGCGGTGGTGGCAGAGGTGGTACCTTCACCACCCCTCGAGGATTTCGTGGCGGATTCAGAGGAGGTCGTGGGGGCAGGGAGTTTGCCGATTTTGAATATAGGGTAAG- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111090047 133 - 145441459 CCTTGGCTTCCGTGGTGGCAGAGGGCGTGGTAGTGGCCGAGGAGGAACCTTCACTGCCCCTCGAGGGTTTCGTGCTGGATTCAGAGGCGCTCGTGGTGGTAGGGAGTTTGCAGACTTTGAATATAGGGTAAGT i mm10.chr7 C 0 C 0 s canFam3.chr1 4609718 133 - 122678785 TCTTGGTTTCCGTGGTGGCCGAGGGCGTGGTGGTGGCAGAGGTGGTACTTTCACTACCCCTCGAGGATTTCGTGGTGGATTCAGAGGAGGTCGTGGGGGCAGGGAGTTTGCAGATTTTGAATACAGGGTAAGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 329939 133 + 643850 CCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGCGGCAGAGGTGGTAACTTTACCACCCCTAGAGGATTTCGTGGTGGATTTAGAGGAGGTCGTGGCGGCAGAGAGTTTGCAGATTTTGAATATAGGGTAGGT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M a score=1475466.000000 s hg38.chr19_GL383574v1_alt 69486 134 + 155864 GTTACTGTTAATAAATTCTTTGGGGTTGACATGCA-TTTTACAAGACTCAAAACATTTTTACTTG-TTTTTGTTTTGGGTGAATTGT-TTTGAGGACATTAGAATAACTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAGGATAT s panTro5.chr19 36138065 134 + 61309027 GTTATTGTTAATAAATTCTTTGGGGTTGACATGCA-TTTTACAAGACTCAAAACATTTTTACTTG-TTTTTGTTTTGGGTGAATTGT-TTTGAGGACATTAGAATAACTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAGGATAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39884286 135 + 64411610 GTTATTGTTAATAAATTCTTTGGGGTTGACATGCA-TTTTACAAGACTCAAAACATTTTTACTTGTTTTTTTTTTTGGGTGAATTGT-TTTGAGGACATTAGAATAACTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAGGATAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6301880 134 - 8369475 GTTATTGTTAATAAATTCTTTGGGGTTGACATGCA-TTTTACAAGACTCAAAACATTTTTACTTG-TTTTTGTTTTGGGTGAATTGT-TTTGAGGACATTAGAATAACTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAGGATAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63894153 134 - 106955855 GTTATTGTTAATAAATTCTTTGGGGTTGACATGCA-TTTTACAAGACTCAAAACATTTTTACTTA-TTTTTGTTTTGGGTGAATTGT-TTTGAGGACATTAGAATAACTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAGGATAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30206250 129 + 53671032 GTTCTTGTTAATGAATTCTTTGGGGTTGACATACA-TTTTACAAGACTCAAAACATTTTTGCTTG-TTTTTGTTTTGGGTGAA------TTGAGGACATTAGAATAATTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAGGATAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34659963 134 + 59248254 GTTCTTGTTAATGAATTCTTTGGGGTTGACATACA-TTTTACAAGACTCAAAACATTTTTGCTTG-TTTTTGTTTTGGGTGAATTGT-TTTGAGGACATTAGAATAATTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAGGATAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4526158 134 - 13342542 GTTCTTGTTAATGAATTCTTTGGGGTTGACATACA-TTTTACAAGACTCAAAACATTTTTGCTTG-TTTTTGTTTTGGGTGAATTGT-TTTGAGGACATTAGAATAATTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAGGATAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456709 134 + 7714307 GTTCTTGTTAATGAATTCTTTGGGGTTGACATACA-TTTTACAAGACTCAAAACATTTTTGCTTG-TTTTTGTTTTGGGTGAATTGT-TTTGAGGACATTAGGATAATTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAGGATAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256548 134 + 50890351 GTTCTTGTTAATAAATTCTTTGGGGTTGACATACA-TTTTACAAGACTCAAAACATTTTTGCTTG-TTTTTGTTTTGGGTGAATTGT-TTTGAGGACATTAGAATAATTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAGGATAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 887851 134 - 2385121 GTTCTTGTTAATGAATTCTTTGGGGTTGACATATA-TTTTACAAGACTCAAAACATTTTTGCTTG-TTTTTGTTTTGGGTGAATTGT-TTTGAGGACATTAGAATAATTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAGGATAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2327134 134 + 4274983 GTTCTTGTTAATAAATTCTTTGGGGTTGACATACA-TTTTACAAGACTCAAAACATTTTTGCTTG-TTTTTGTTTTGGGTGAATTGT-TTTGAGGACATTAGAATAACTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAGGATAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28557959 136 + 49145316 GTTATTGTTAATAAATGTTTTGGGGTTGACATGCA-TTTTACAAGACTCAAAACATTTTTACTTGTTTTTTGTTTAGGGTGAAATTTATTTGAGGACATTAGAGTAACTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAGGATAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5401575 135 + 8899380 GTTATTGTTAATAAATGCTTTGGGGTTGACATGCA-TTTTACAAGACTCAAAACATTTTT-CTTGTTTTTTGTTTAGGGTGAAATGTATTTGAGGACATTAGAGTAACTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAggatat i saiBol1.JH378197 C 0 I 1016 s cebCap1.NW_016107633v1 1610080 136 - 2680843 GTTGTTCTTAATAAATGCTTTGGGGTTGACATGCA-TTTTACAAGACTCAAAACATTTTTACTTGTTTTTTGTTTAGGGTGAAATTTATTTGAGGACATTAGAGTAACTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAGGATAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 358968 136 - 4471408 GTTATTGTTAATAAATGCTTTGGGGTTGACATGCA-TTTTACGAGACTCAAAACATTTTTACTTGTTTTTTGTTCAGAGTAAAATTTATTTGAGGACATTAGAGTAACTTCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------AGTAGAGGATAT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5476512 118 + 5549422 -----TAGTAGTATATACTTTGAGGTTGGTGCGCAGCTTTATGAGACTCAAAACATTTTTACTTT-TATCTATT--------------TTTGTGGGCATTAGAATAACCTCCCTTTTG--------------------------------------------ACTTTTTC---------------------------------------------------AATGGAGGATAT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111090180 110 - 145441459 ------ATAGCTGCATGCTGTGGGGATGGCATTCA---------------GAACG-TTTTACTTT-TATCTATTTTCGCAGAATCAT-TTTTAAAACATTAGAATAACTTTTAGTTTA--------------------------------------------AC-TTCC------------------------------------------------------TGGAGAATAT i mm10.chr7 C 0 C 0 s canFam3.chr1 4609851 204 - 122678785 ---------ATTTTATGCTTTGGGATGGGCATGTAGTTTTATGAAATTT-----------------TATTTATTTTGAATGAA-TAT-TTTTAGGATATTTGTATAACTTTCAATTTGTTTAGTGGGGGATGAGGTTGTTTATATCATTTTAAGGAACAGTAAC-TTCTTGTCTAGTGAGTCCAAAGTTTTTAACTGTTTTTTTTTTTTTCAACTGGAGGAAGTAAGGGATAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 330072 101 + 643850 ------ATTGTTATATGCCTTGGTGTTGGCATCCA-GT----------------------------AATCTCTTTGGGGTGAATTTC-TTTGAGGGCCTTTGAATAACATCCATTTTG--------------------------------------------AC-TTTTC---------------------------------------------------TGTTTAGAATGT i dasNov3.JH563638 C 0 I 718 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I a score=13690.000000 s hg38.chr19_GL383574v1_alt 69620 2 + 155864 -AC s panTro5.chr19 36138199 2 + 61309027 -AC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39884421 2 + 64411610 -AC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6302014 2 - 8369475 -AC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63894287 2 - 106955855 -AC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30206379 2 + 53671032 -AC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34660097 2 + 59248254 -AC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4526292 2 - 13342542 -AC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456843 2 + 7714307 -AC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256682 2 + 50890351 -AC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 887985 2 - 2385121 -AC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2327268 2 + 4274983 -AC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28558095 2 + 49145316 -AT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1610216 2 - 2680843 -AC i cebCap1.NW_016107633v1 C 0 I 986 s aotNan1.NW_018505377v1 359104 2 - 4471408 -AT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5476630 2 + 5549422 -GC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111090290 2 - 145441459 -AC i mm10.chr7 C 0 C 0 s canFam3.chr1 4610055 2 - 122678785 AA- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e dasNov3.JH563638 330173 718 + 643850 I e saiBol1.JH378197 5401710 1016 + 8899380 I a score=24221.000000 s hg38.chr19_GL383574v1_alt 69622 3 + 155864 GTG s panTro5.chr19 36138201 3 + 61309027 GTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39884423 3 + 64411610 GTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6302016 3 - 8369475 GTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63894289 3 - 106955855 ATG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30206381 3 + 53671032 ATG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34660099 3 + 59248254 ATG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4526294 3 - 13342542 ATG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456845 3 + 7714307 ATG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256684 3 + 50890351 ATG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 887987 3 - 2385121 ATG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2327270 3 + 4274983 ATG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28558097 3 + 49145316 GTG i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 359106 3 - 4471408 GTG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5476632 3 + 5549422 CTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111090292 3 - 145441459 ATG i mm10.chr7 C 0 I 474 s canFam3.chr1 4610057 3 - 122678785 ATG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e dasNov3.JH563638 330173 718 + 643850 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I e saiBol1.JH378197 5401710 1016 + 8899380 I a score=70155.000000 s hg38.chr19_GL383574v1_alt 69625 10 + 155864 --------------------------------------ATTCAGATGT s panTro5.chr19 36138204 10 + 61309027 --------------------------------------ATTCAGATGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39884426 10 + 64411610 --------------------------------------ATTCAGATGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6302019 10 - 8369475 --------------------------------------ATTCAGATGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63894292 10 - 106955855 --------------------------------------ATTCAGATGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30206384 10 + 53671032 --------------------------------------AGTCAGATGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34660102 10 + 59248254 --------------------------------------AGTCAGATGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4526297 10 - 13342542 --------------------------------------AGTCAGATGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456848 10 + 7714307 --------------------------------------AGTCAGATGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256687 10 + 50890351 --------------------------------------AGTCAGATGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 887990 10 - 2385121 --------------------------------------AGTCAGATGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2327273 10 + 4274983 --------------------------------------ATTCAGATGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28558100 10 + 49145316 --------------------------------------ATTTAGATGT i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 359109 10 - 4471408 --------------------------------------ATTTAGATGT i aotNan1.NW_018505377v1 C 0 I 716 s otoGar3.GL873654 5476635 10 + 5549422 --------------------------------------ATTAGGATGT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4610060 48 - 122678785 AGATTGGGATGGGAGGGGTCTTTATTATAGAGCCATGGTTTTAGATGT i canFam3.chr1 C 0 I 29 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e dasNov3.JH563638 330173 718 + 643850 I e mm10.chr7 111090295 474 - 145441459 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I e saiBol1.JH378197 5401710 1016 + 8899380 I a score=4333.000000 s hg38.chr19_GL383574v1_alt 69635 1 + 155864 A s panTro5.chr19 36138214 1 + 61309027 G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39884436 1 + 64411610 G i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6302029 1 - 8369475 G i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63894302 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30206394 1 + 53671032 G i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34660112 1 + 59248254 G i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4526307 1 - 13342542 G i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456858 1 + 7714307 G i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256697 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 888000 1 - 2385121 G i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2327283 1 + 4274983 G i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28558110 1 + 49145316 G i calJac3.chr22 C 0 C 0 s otoGar3.GL873654 5476645 1 + 5549422 T i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4610137 1 - 122678785 A i canFam3.chr1 I 29 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e dasNov3.JH563638 330173 718 + 643850 I e mm10.chr7 111090295 474 - 145441459 I e aotNan1.NW_018505377v1 359119 716 - 4471408 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I e saiBol1.JH378197 5401710 1016 + 8899380 I a score=27531.000000 s hg38.chr19_GL383574v1_alt 69636 4 + 155864 TATA s panTro5.chr19 36138215 4 + 61309027 TATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39884437 4 + 64411610 TATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6302030 4 - 8369475 TATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63894303 4 - 106955855 TATA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30206395 4 + 53671032 TATA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34660113 4 + 59248254 TATA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4526308 4 - 13342542 TATA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456859 4 + 7714307 TATA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256698 4 + 50890351 TATA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 888001 4 - 2385121 TATA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2327284 4 + 4274983 TATA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28558111 1 + 49145316 T--- i calJac3.chr22 C 0 C 0 s otoGar3.GL873654 5476646 4 + 5549422 TATA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4610138 4 - 122678785 TGTA i canFam3.chr1 C 0 I 67 s dasNov3.JH563638 330891 4 + 643850 TAAA i dasNov3.JH563638 I 718 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e mm10.chr7 111090295 474 - 145441459 I e aotNan1.NW_018505377v1 359119 716 - 4471408 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I e saiBol1.JH378197 5401710 1016 + 8899380 I a score=33477.000000 s hg38.chr19_GL383574v1_alt 69640 3 + 155864 taa s panTro5.chr19 36138219 3 + 61309027 taa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39884441 3 + 64411610 taa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6302034 3 - 8369475 taa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63894307 3 - 106955855 taa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30206399 3 + 53671032 taa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34660117 3 + 59248254 TAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4526312 3 - 13342542 taa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456863 3 + 7714307 TAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256702 3 + 50890351 taa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 888005 3 - 2385121 TAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2327288 3 + 4274983 TAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28558112 3 + 49145316 TGA i calJac3.chr22 C 0 C 0 s otoGar3.GL873654 5476650 3 + 5549422 TAA i otoGar3.GL873654 C 0 I 507 s mm10.chr7 111090769 3 - 145441459 taa i mm10.chr7 I 474 C 0 s canFam3.chr1 4610209 3 - 122678785 TGA i canFam3.chr1 I 67 C 0 s dasNov3.JH563638 330895 3 + 643850 TAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e aotNan1.NW_018505377v1 359119 716 - 4471408 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I e saiBol1.JH378197 5401710 1016 + 8899380 I a score=46306.000000 s hg38.chr19_GL383574v1_alt 69643 8 + 155864 agacatta- s panTro5.chr19 36138222 8 + 61309027 agacatta- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39884444 8 + 64411610 agacatta- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6302037 8 - 8369475 agacatta- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63894310 8 - 106955855 agacacta- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30206402 8 + 53671032 aaacacta- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34660120 8 + 59248254 AAACACTA- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4526315 8 - 13342542 aaacacta- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456866 8 + 7714307 AAACACTA- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256705 8 + 50890351 aaacacta- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 888008 8 - 2385121 AAACACTA- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2327291 8 + 4274983 AAACACTA- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28558115 8 + 49145316 AGAAACTA- i calJac3.chr22 C 0 I 691 s mm10.chr7 111090772 7 - 145441459 -agctgta- i mm10.chr7 C 0 I 1 s canFam3.chr1 4610212 8 - 122678785 AGAAATTT- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 330898 8 + 643850 -AGCACTAT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e otoGar3.GL873654 5476653 507 + 5549422 I e aotNan1.NW_018505377v1 359119 716 - 4471408 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I e saiBol1.JH378197 5401710 1016 + 8899380 I a score=1005641.000000 s hg38.chr19_GL383574v1_alt 69651 159 + 155864 tacaaaaaaagacagtatag--tatcaccttta--tttcatgttaacaga---atatacttttaacacccaaagagtctatctaggaagcacatactcccagaatggaagggca-agctttaacatttaatagcagttaac------atttatATagtatttaccaagtaaca- s panTro5.chr19 36138230 158 + 61309027 tacaaaaaaagacagtatag--tatcaccttta--tttcatgttaacaga---atatacttttaacacctaaggagtctatctaggaagcacatactcccagaatggaagggca-agctttaacatttaatagcagttaac------atttatATagtatttaccaagt-acc- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39884452 158 + 64411610 tacaaaaaaagacagtatag--tatcaccttta--tttcatgttaacaga---atatacttttaacacctaaggagtctatctaggaagcacatactcccagaatggaagggca-agctttaacatttaataGCAGTTaac------atttatatagtatttaccaagt-acc- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6302045 158 - 8369475 tacaaaaaaagacagtatat--tatcaccttta--tttcatgttaacaga---atatacttttaacacctaaagagtctatctaggaagcacatactcccagaatggaagggca-agctttaacatttaataGCAGTTaac------atttatatagtatttaccaagt-acc- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63894318 158 - 106955855 tacaaaaaaagacagtatag--tatcaccttta--tttcatgttaacaga---atatacttttaacaccaaaagagtctatctaggaagcacatactcccagaatggaagggca-agctttaacatttaataGCAGTTaac------atttatatagtatttaccaagt-acc- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30206410 156 + 53671032 tacaaaaaaggacagtatag--tatcaccttta--tttcatgttaac--a---atacacttttaacaccaaaagagtctatctagaaagcacatcctcccagaatggaagggca-agctctaacatttaatagcagttaac------atttatATagtatttaccaagt-acc- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34660128 156 + 59248254 TACAAAAAAGGACAGTATAG--TATCACCTTTA--TTTCATGTTAAC--A---ATACACTTTTAACACCAAAAGAGTCTATCTAGAAAGCACATCCTCCCAGAATGGAAGGGCA-AGCTCTAACATTTaatagcagttaac------atttatatagtatttaccaagt-acc- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4526323 156 - 13342542 tacaaaaaaggacagtatag--tatcaccttta--tttcatgttaac--a---atacacttttaacaccaaaagagtctatctagaaagcacatcctcccagaatggaagggca-agctctaacatttaatagcagttaac------atttatATagtatttaccaagt-acc- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5456874 158 + 7714307 TACAAAAAAGGACAGTATAG--TATCACCTTTA--TTTCATGTTAACAGA---ATACACTTTTAACACCAAAAGAGTCTATCTAGAAAGCATATCCTCCCAGAATGGAAGGGCA-AGCTCTAACATTTaatagcagttaac------atttatatagtatttaccaagt-acc- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256713 158 + 50890351 tacaaaaaaggacagtatag--tatcaccttta--tttcatattaacaga---atacacttttaacaccaaaagagtctatctagaaagcacatcctcccagaatggaagggca-agctctaacatttaatagcagttaac------atttatgTagtatttagcaagt-acc- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 888016 158 - 2385121 TACAAAAAAGGACAGTATAG--TATCACCTTTA--TTTCATGTTAACAGA---ATACACTTTTAACACCAAAAGAGTCTATCTAGAAAGCACATCCTCCCAGAATGGAAGGGCA-AGCTCTAACATTTaatagcagttaac------atttatatagtatttaccaagt-acc- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2327299 158 + 4274983 TACAAAAAAGGACAGTATAG--TATCACCTTTA--TTTCATGTTAACAGA---ATACACTTTTAACACCAAAAGAGTCTGTCTAGAAAGCGCATCCTCCCAGAATGGAAGGGCA-AGCTCTAACATTTaatagcagttaac------atttatatagtatttaccaagt-acc- i colAng1.NW_012111697v1 C 0 C 0 s mm10.chr7 111090780 127 - 145441459 aataaaaAATGAC--TGTAG--TATCGCCTTTA--TTTCATATTACTAGATTTTTACAC-TTTAATATCAAAGGAAGCAAT------------------------------GCA-AACCTGTACATCTGAGGGCA-TTGGT------GTTCCCGTAGTAGTGAGTGAGA-AAc- i mm10.chr7 I 1 I 1 s canFam3.chr1 4610220 139 - 122678785 TACCAAAAAAAACTATATCA--CATTACCTTTA--TTTCATATTG-CAAA---GTGTGC-TTCAACACCAAAAGAG----TCTAGAAAAGACATACT-GCAGAATAGAAAGCC-------------TCCAAAGCagccaac------attgatacagtattttgcatgt-agt- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 330906 144 + 643850 TAAAAGAAAAGACGATATAAATTACCACTTCTATTTTTCATATTG-CAAA---ATAGAC-TTTAATACCAGAAGAG------TAGGAACT------------------AGGACATAGCCTTTACATATAAGAGAAACTAACAGGTatagttatttaggatttagcatgt-gcca i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e otoGar3.GL873654 5476653 507 + 5549422 I e aotNan1.NW_018505377v1 359119 716 - 4471408 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I e saiBol1.JH378197 5401710 1016 + 8899380 I e calJac3.chr22 28558123 691 + 49145316 I a score=6654368.000000 s hg38.chr19_GL383574v1_alt 69810 658 + 155864 agacattgttttaaatatttttttacatattaacttatttaaactgcacatcaactctgtgaggtaggttctatt---------------------attatccccattttacaagtgaggaaatgggtatagagatattaagtaacttgcgaaaggtcacatagctagtaagtgatggtgctgggtgttgagcccagcaagttgtttcctgagtcagtactcttaatttggttttgttgaaaattca-ctacattttccctggttttctcctttcaccatgaaattgaaaaTGTTTCGATATATTGGCCTTCAGGA---GCTACTGCTAGAGAATTCTGTAACTCTGTATAGTAGCCTTATGTGTATAATGTAGCTTTTGACAGGTGTCTGTAAATTAAGTCAGCATAGTAACTATCTCAGTTAACAGTAAACTATCTTAGTTTATTGA-TTTTAGAAGTAGTGGAGAGGAAGGGCTATA-----ACAGAAAGGACCAAAATC---TTGTAAAGAGTTCCACTTGTAATAGCAACAGGCAGCTGGAAACAGAAAGACCTGTTAGCAGGAGTTCCATTGCCCAGTACTTAAAACTGGCCATTGTTGA-GATCTCTCTGGAAAGAGATCAGTATTAGTGGCTTTTG-----GACCTGCT-CTATTAATTTTAATGCTTTTGATATTGTGCCATCACAGCCA s panTro5.chr19 36138388 658 + 61309027 agacattgttttaaatatttttttacatattaacttatttaaactgcacatcaactctgtgaggtaggttctatt---------------------attatccccattttacaagtgaggaaatgggtatagagatattaagtaacttgcgaaaggtcacatagctagtaagtgatggtgctgggtgttgagcccagcaagttgtttcctgagtctctactcttaatttggttttgttgaaaattca-ctacattttccctggttttctcctttcaccatgaaattgaaaaTGTTTCGATATATTGGCCTTCAGGA---GCTACTGCTAGAGAATTCTGTAACTCTGTATAGTAGCCTTATGTGTATAATGTAGCTTTTGACAGGTGTCTGTAAATTAAGTCAGCATAGTAACTATCTCAGTTAACAGTAAACTATCTTAGTTTATTGA-TTTTAGAAGTAGTGGAGAGGAAGGGCTATA-----ACAGAAAGGACCAAAATC---TTGTGAAGAGTTCCACTTGTAATAGCAACAGGCAGCTGGAAACAGAAAGACCTGTTAGCAGGAGTTCCATTGCCTAGTACTTAAAACTGGCCATTGTTGA-GATCTCTCTGGAAAGAGATCAGTATTAGTGGCTTTTG-----GACCTGCT-CTATTAATTTTAATGCTTTTGATATTGTGCCATCACAGCCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39884610 658 + 64411610 agacattgttttaaatatttttttacatattaacttatttaaactgcacatcaactctgtgaggtaggttctatt---------------------attatccccattttacaagtgaggaaatgggtatagagatattaagtaacttgcgaaaggtcacatagctagtaagtgatggtgctgggtgttgagcccagcaagttgtttcctgagtctctactcttaaTTTGGTTTTGTTGAAAATTCA-CTACATTTTCCCTGGTTTTCTCCTTTCACCATGAAATTGAAAATGTTTCGATATATTGGCCTTCAGGA---GCTACTGCTAGAGAATTCTGTAACTCTGTATAGTAGCCTTATGTGTATAATGTAGCTTTTGACAGGTGTCTGTAAATTAAGTCAGCATAGTAACTATCTCAGTTAACAGTAAACTATCTTAGTTTATTGA-TTTTAGAAGTAGTGGAGAGGAAGGGCTATA-----ACAGAAAGGACCAAAATC---TTGTGAAGAGTTCCACTTGTAATAGCAACAGGCAGCTGGAAACAGAAAGACCTGTTAGCAGGAGTTCCATTGCCTAGTACTTAAAACTGGCCATTGTTGA-GATCTCTCTGGAAAGAGATCAGTATTAGTGGCTTTTG-----GACCTGCT-CTATTAATTTTAATGCTTTTGATATTGTGCCATCACAGCCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6302203 658 - 8369475 agacattgttttaaatatttttttacatattaacttatttaaactgcacatcaactctgtgaggtaggttctatt---------------------attatccccattttacaagtgaggaaatgggtatagagatattaagtaacttgcgaaaggtcacatagctagtaagtgatggtgctgggtgttgagcccagcaagttgtttcctgagtcgctactcttaatttggttttgtggaaaattca-ctacattttccctggttttctcctttcaccatgaaATTGAAAATGTTTCGATATATTGGCCTTCAGGA---GCTACTGCTAGAGAATTCTGTAACTCTGTATAGTAGCCTTATGTGTATAATGTAGCTTTTGACAGGTGTCTGTAAATTAAGTCAGCATAGTAACTATCTCAGTTAACAGTAAACTATCTTAGTTTATTGA-TTTTAGAAGTAGTGGAGAGGAAGGGCTATA-----ACAGAAAGGACCAAAATC---TTGTAAAGAGTTCCACTTGTAGTAGCAACAGGCAGCTGGAAACAGAAAGACCTGTTAGCAGGAGTTCCATTGCCCAGTACTTAAAACTGGCCATTGTTGA-GATCTCTCTGGAAAGAGATCAGTATTAGTGGCTTTTG-----GACCTGCT-CTGTTAATTTTAATGCTTTTGATATTGTGCCATCACAGCCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63894476 649 - 106955855 agac---gttttaaata-ttttttacata-----ttatttaaaccgcacatcaactctgtgaggtaggttctatt---------------------attatccccattttacaagtgaggaaatgggtatagagatattaagtaacttgcgaaaggtcacatagctagtaagtgatggtgttgggtgttgagcccagcaggttggttcctgagtcactactcttaatttggttttgtggaaaattca-ctacatcttccctggttttctcctttcaccatgaacttgaaaaTGTTTGAATATATTGGCCTTCAGGA---GCTACTGCTAGAGAATTCTGTAACTCTATATAGTAGCCTTATGTGTATAATTTAGCTTTTGACAGGTGTCTGTAAATTAAGTCAGCATAGTAACTATCTCAGTTAACAGTAAACTATCTTAGTTTATTGA-TTTTAGAAGTAGTGGAGAGGAAAGGCTATA-----ACAGAAAGGATCAAAATC---TTGTAAAGACCTCCACTTGTAATAGCAACAGGCAGCTGGAAACAGAAAGACCTGTTAGCAGGACTTCCATTGCCCAGTACTTAAAACTGGCCATTGTTGA-GATCTCTCTGGAAAGAGATCAGTATTAGTGGCATTTG-----GACCTACT-CTGTTGATTTTGATGCCTTTGATATTGTGCCATCACAGCCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30206566 653 + 53671032 attcattgtattaagta-ttttttacatattaacttatttaaacggcacatcaactctgtgaggtaggttctatt---------------------attatctccattttacaagtgaggaaataggtatagagatattaagtaacttgcgaaaggtcacatagctagtaagtgatggtgctgggtgttgagcccagcaa---gtttcctgagttactactcttaaTTTGGTTTTGTAGAAAACTCA-GTACATTTTCCCTGGTTTTCTCCTTTCACCATGAACTTGAAAACGTTTCGATATATTGGCCTTCAGGA---GCTGCTGCTAGAGAATTCTATAACTCTGTATAGTAGCTTTATGTGTATAATTTAGCTTTTGACAGATGTCTGTACATTAAGTCAGCATAGTAACTATCTCAGTTAACAGTAAACTATCTTAGTTTATTGA-TTTTAGAAGTAATGGAGAGGAAAGGCTGT------ACAGAAAGGATCAAAATC---TTGTAAAGAGCTCCACTTGTAATAGCAACAGGCAGCTGGAAACAGAAAGACCTGTTAGCAGGAGTTCCATTGCCCAGTACTTAAAACTGGCCATTGTTGA-GATCTCTCTGGAAAGAGATCAGTATTAATGGCTTTTG-----GACCTGCT-CTATTAATTTTGATGCCTTTGATATTGTGCCATCACAGCCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34660284 653 + 59248254 agacattgtattaagta-ttttttacatattaacttatttaaacggcacatcaactctgtgaggtaggttctatt---------------------attatccccattttacaagtgaggaaataggtatagagatattaagtaacttgcgaaaggtcacatagctagtaagtgatggtgctgggtgttgagcccagcaa---gtttcctgagttactactcttaatttggttttgtagaaaactca-gtacattttccctggttttctcctttcaccatgaacttgaaaacGTTTCGATATATTGGCCTTCAGGA---GCTGCTGCTAGAGAATTCTATAACTCTGTATAGTAGCTTTATGTGTATAATTTAGCTTTTGACAGATGTCTGTACATTAAGTCAGCATAGTAACTATCTCAGTTAACAGTAAACTATCTTAGTTTATTGA-TTTTAGAAGTAATGGAGAGGAAAGGCTGT------ACAGAAAGGATCAAAATC---TTGTAAAGAGCTCCACTTGTAATAGCAACAGGCAGCTGGAAACAGAAAGACCTGTTAGCAGGAGTTCCATTGCCCAGTACTTAAAACTGGCCATTGTTGA-GATCTCTCTGGAAAGAGATCAGTATTAATGGCTTTTG-----GACCTGCT-CTATTAATTTTGATGCCTTTGATATTGTGCCATCACAGCCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4526479 653 - 13342542 agacattgtattaagta-ttttttacatattaacttatttaaacggcacatcaactctgtgaggtaggttctatt---------------------attatccccattttacaagtgaggaaataggtatagagatattaagtaacttgcgaaaggtcacatagctagtaagtgatggtgctcggtgttgagcccagcaagttgtttcctgagttactactcttaaTTTGGTTTTGTGGAAAACTCA-GTACATTTTCCCTGGTTTTCTCCTTTCACCATGAACTTGAAAACGTTTCGATATATTGGCCTTCAGGA---GCTGCTGCTAGAGAATTCTATAACTCTGTATAGTAGCTTTATGTGTATAATTTAGCTTTTGACAGATGTCTGTACATTAAGTCAGCATAGTAACTATCTCAGTTAACAGTAAACTATCTTAGTTTATTGA-TTTTAGAAGTAATGGAGAGGAAAGGCTGT------ACAGAAAGGATCAAAATC---TTGTAAAGAGCTCCACTTGTAATAGCAACAGGCAGCTGGAAACAGAAAGACCTGTTAGC---AGTTCCATTGCCCAGTACTTAAAACTGGCCATTGTTGA-GATCTCTCTGGAAAGAGATCAGTATTAATGGCTTTTG-----GACCTGCT-CTATTAATTTTGATGCCTTTGATATTGTGCCATCACAGCCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5457032 655 + 7714307 agacattgtattaagta-ttttttacatattaacttatttaaacggcacatcaactc-gtgaggtaggttctatt---------------------attatccccattttacaagtgaggaaataggtatagagatattaagtaacttgcgagaggtcacatagctagtaagggatggtgctgggtgttgagcccagcaagttgtttcctgagttactactcttaaTTTGGTTTTGTGGAAAACTCA-GTACATTTTCCCTGGTTTTCTCCTTTCACCATGAACTTGAAAACGTTTCGATATATTGGCCTTCAGGA---GCTGCTGCTAGAGAATTCTATAACTCTGTATAGTAGCTTTATGTGTATAATTTAGCTTTTGACAGGTGTCTATACATTAAGTCAGCATAGTAACTATCTCAGTTAACAGTAAACTATCTTAGTTTATTGA-TTTTAGAAGTAATGGAGAGGAAAGGCTAT------ACAGAAAGGATCAATATC---TTGTAAAGAGCTCCACTTGTAATAGCAACAGACAGCTGGCAACAGAAAGACCTGTTAGCAGGAGTTCCATTGCCCAGTACTTAAAACTGGCCATTGTTGA-GATCTCTCTGGAAAGAGATCAGTATTAATGGCTTTTG-----GACCTGCT-CTATTAATTTTGATGCCTTTGATATTGTGCCATCACAGCCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29256871 648 + 50890351 agacattgtat----ta-ttttttacatgtta----attaaaatggcacatcaactctgtgaggtaggttctatt---------------------attatccccattttacaagtgaggaaataggtatagaggtattaagtaacttgcgaaaggtcacgtagctagtaagtgatggtgctgggtgttgagcccagcaagttgtttcctgagttactactcttaattcggttttgtggaaaactca-gtacattttccctggttttctcctttcaccatgaacttgaaaaTGTTTCGATATATTGGCCTTCAGGA---GCTGCTGCTAGAGAATTCTATAACTCTGTATAGTAGCTTTATGTGTATAATTTAGCTTTTGACAGGTGTCTGTACATTAAGTCAGCATAGTAACTATCTCAGTTAACAGTAAACTATCTTAGTTTATTGA-TTTTAGAAGTAATGGAGAGGAAAGGCTAT------ACAGAAAGGATCCAGATC---TTCTAAAGAGCTCCACTTGTAATTGCAACAGGCAGCTGGAAACAGAAAGACCTGTTAGCAGGAGTTCCATTGCCCAGTACTTAAAACTGGCCATTGTTGA-GATCTCTCTGGAAAGAGATCAGTATTAGTGGCTTTTG-----GACCTGCT-CTATTAATTTTGATGCCTTTGATATTGTGCCATCACAGCCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 888174 655 - 2385121 agacattgtattaagta-ttttttagatattaacttatttaaacggcacatcaactc-gtgaggtaggttctatt---------------------attatccccattttacaagtgaggaaataggtatagagatattaagtaacttgcaagaggtcacatagctagtaagggatggtgctgggtgttgagcccagcaagttgtttcctgagttactactcttaaTTTGGTTTTGTGGAAAACTCA-GTACATTTTCCCTGGTTTTCTCCTTTCACCATGAACTTGAAAACGTTTCGATATATTGGCCTTCAGGA---GCTGCTGCTAGAGAATTCTATAACTCTGTATAGTAGCTTTATGTGTATAATTTAGCTTTTGACAGGTGTCTGTACATTAAGTCAGCATAGTAACTATCTCAGTTAACAGTAAACTATCTTAGTTTATTGA-TTTTAGAAGTAATGGAGAGGAAAGGCTAT------ACAGAAAGGATCAGTATC---TTGTAAAGAGCTCCTCTTGTAATAGCAACAGGCAGCTGGAAACAGAAAGACCTGTTAGCAGGAGTTCCATTGCCCAGTACTTAAAACTGGCCATTGTTGA-GATCTCTCTGGAAAGAGATCAGTATTAATGGCTTTTG-----GACCTGCT-CTATTAATTTTGATGCCTTTGATATTGTGCCATCACAGCCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2327457 656 + 4274983 agacattgtattaagtg-ttttttacatattaacttatttaaacggcacatcaactctgtgaggtagtttctatt---------------------attatccctattttacaagtgaggaaataggtatagagatattaagtaacttgcgaagggtcacatagcttgtaagtgatggtgctgggtgttgagcccagcaagttgtttcctgagttactactcttaaTTTGGTTTTGTGGAAAACTCA-GTACATTTTCCCTGGTTTTCTCCTTTCACCATGAACTTGAAAACGCTTCGATATATTGACCTTCAGGA---GCTGCTGCTAGAGAATTCTGTAACTCTGTATAGTAGCTTTATGTGTATAATTTAGCTTTTGACAGGTGTCTGTACATTAAGTCAGCATAGTAACTATCTCAGTTAACAGTAAACTATCTTTGTGTATTGA-TTTTAGAAGTAATGGAGAGGAAAGGCTAT------ACAGAAAGGATCAAAATC---TTGTACAGAGCTCCACTTGTAATAGCAACAGGCAGCTGGAAACAGAAAGACCTGTTAGCAGGAGTTCCATTGCCCAGTACTTAAAACTGGCCATTGTTGA-GATCTCTCTGGAAAGAGATCAGTATTAGTGGCTTTTG-----GACCTGCT-CTATTAATTTTGATGCCTTTGATATTGTGCCATCACAGCCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28558814 659 + 49145316 agacattgttttaaatgtttttttacatattaacttatttaaactgcacatcaactctgtgagttaggtactatt---------------------attaaccctattttacaagtgaggaaataggtgtagagatattaagtaacttgccaaaggtcacatagctagtaagtgatggtgcttgttgttgagcccaacaagttagctcctgagtcactattcttaatttggttttgagaaaaattca-ctacattttcccaggttttctcctttcaccatgatcttgaaaaTGTTTCG--GTATTGGCCTTCAGGAGCTGCTGCTGCTAGAGAATTCTATAACTCTCTGTAGTATCCTTATGTGTATAATTTAGCTTTTGACAGGCATCTGCAAATTAAGCCAGCATAGTAACTATCTCAGTTAATAGTAGACTATCTTAGTTTATTGA-TTTTAGAGGTAGTGGAGAGGAAAGGCTATA-----ATAGAAAGGATCAAAATC---TTGTAAAGAGCTCCACTCATAATAGCAACAGGCAGCTAAAAACAGAATGACCTGTTAGTAGGAATTCCATTGCTCAGCACTTAAAACTGGCCATTGTTGA-GATCTCTCTGGAAAGAGTTCAGTATTAGTGGCTTTTG-----AACCTGCT-CTCTTAATTTTGATGCCTTTGATATTGTGCTATCACAACCA i calJac3.chr22 I 691 C 0 s saiBol1.JH378197 5402726 657 + 8899380 agacattgttttaaata-ttttttacatattaacttacttaaactgcacatcaaccctgtgagttagg-actatt---------------------attaaccccattttacaagtgaggaaatcggtgtagagatattaagtaactttccaaaggtcacatagctagtaagtgatggtgctggttgttgagcccaacaagttagctcctgtgtcactgctcttaatttggttttgagaaaaattca-ctacattttccctggttttctcctttcaccatgatcttgaaaaTGTTTCG--GTATTGGCCTTCAGGAGCTGCTGCTGCTAGAGAATTCTATAACTCTGTATAGTATCCTTATGTGTATAATTTAGCTTTTGACAGGCATCTGTAAATTAAGCCAGCATAGTAACTATCTCAGTTAATAGTAAACTATCTTAATTTATTGA-TTTTAGAAGTAGTGGAGAGGAAAGGCTATA-----ATAGAAAGGATCAAAATC---TTGTAAAGAGCTGCACTCATAATAGCAAGAGGCAGCTAAAAACAGAATGACCTGTTAGCAGGAATTCCATTGCTCAGCACTTAAAACTGCCCATTGTTGA-GATATCTCTGGAAAGAGATCGGTATTAGTGGCTTTTG-----AACCTGCT-CTCTTAATTTTGATGCCTTTGATACTGTGCTATCATAACCA i saiBol1.JH378197 I 1016 C 0 s aotNan1.NW_018505377v1 359835 652 - 4471408 agacattgttttaaata-ttttttacata-----ttacttaaactgcacatcaactctgtgagttaggtattatt---------------------attaaccccattttacaagtgaggaaataggtgtagagatattaagtaacttgccaaaggtcacatagctagtaagtgatggtgctggttgttgagcccaacaagttagctcctgagtcactgctcttaatttggttttgagaaaaattca-ctacattttccctggttttctcctttcaccatgATCTTGAAAATGTTTTG--GTATTGGCCTTCAGGAGCTGCTGCTGCTAGAGAATTCTGTAACTCTGTATAGTATCCTTATGTGTATAATTTAGCTTTTGACAGGCATCTGTAAATTAAGCCAGCATAGTAACTATCTCAGTTAATAGTAAACTATCTTAGTTTATTGA-TTTTAGAAGTAGTAGAGAGGAAAGGCTATA-----ACAGAAAGGATCAAAATC---TTGTAAAGAGCTCCATTCATAATATCAACAGGCAGCTAAAAACAGAATGACCTGTTAGCAGGAATTCCATTGCTCAGCACTTAAAACTG-CCATTGTTGA-GATCTCTCTGGAAAGAGATCGATATTAGTGGCTTTTG-----AACCTGCT-CTCTTAATTTAGATGCCTTTGATATTGTGCTATCACAACCA i aotNan1.NW_018505377v1 I 716 C 0 s mm10.chr7 111090908 611 - 145441459 -ggcatggtgctgaatg-tttt---cacactaactcatttaagcctcatgtcagctctgtgagatgggttctatt---------------------attatctaacttttaca----aagaaacagatacagagatattaagtagcctgtccaaggtcacaggagcagagagggatgatcctgagtactgagccgagcaggttggctcttgagtcactgctcttaaTATAGGTTTGTAGGGAACTCA-C----TTGGCTCCTGTCTTCTTTGTAAGGCGTGCTCTCGAGAACCATCGGGTATATTAGCATTCACCA---ACAGCTGTGGGAGAACTCTGTGGCTCTACGCAGTG--TTTTTGTGTACAGTCTATCCAGTGAAAGAGGCCAGTTAA-TAAGGAAGCATTGCAGCTATCT-------TATTAAAGGGTCCTAGTTTATT-----------GTCAAGGAAAGAAA-------------ATAGAAAAGGGCAAAATCCTGTTATACAGAGAGCCACTGATAATAACAAAAGACAGTTGCAAA------AATTTGCTGATAGGAGTTTTGTTGTCCAGTTTTTAAAACCAGCCATTGTTGAGGGTCTATGTGGAAGGACGTTGGTATTCGTGGCTTTGG-----GACCAGCT-ATGTTGATTTTAATATCTTGGATATTGTGCC----CAGCCA i mm10.chr7 I 1 I 1541 s canFam3.chr1 4610359 621 - 122678785 aggcattgttctaaatg-tttttcacatattacctcacttaaatttcacataaactctaagatatcagagttatcttatcactatcaagtgatcagattatcaccactttacagatgaaggaa------tagagatactaaataccttgtccacagtca----gctcataagtgaagctgtgaggtcttgagcctagtaagtttgttcctg----------------------------aAAATTCAGCTGCATTTTCTATGGTTTTCTTATTT-ACCTTGGTCTTAAAAATATTGTGATATATTGGCATTTTAGA---ACTGCTGCTAGAAAACTGTGTAACTCTGTATAGTATGTTTATATGTATAATTTA----TTGAAGAGAGTCTGTAAATGAAGTCAGT---GTCACTTTC--------------ACTCTCCTAGTTTATTGATTTTTAGGATCAGTAGA---AGAAGGTTATATAATCACAGAAAGGATCAAAATCCCCTTATAAACAGATCTACTAGGAATTGCAAAGGGAAGCTGGAAATAAAAAGACCTGCTGGCAGAAATT-CACTGTCCATTATTTGAAACTGGCCATTGTTGA-GATCCCTCTGGAAGGA--TTAATTTTAGTGGCTTTGG-----CATCTGGT-CTGTTAATTTTGACAGCTCTGATTCTGTATCATC-TAGCCA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 331050 581 + 643850 ------------------tttttaacatcttaactcgtttaaatgtcctatcaacttt-tgagatagtttatatt---------------------attatccccattttacaaat---gaaataaccatagaaatattaagtaatttgtccaaggtcacatagcttagtaggaatggcgctaacttttgaaccTCTC--------------GTAAATGCTTGTCATTTACTTCTGTGGAAAACTCA-ATATATTTTCACTGGTTTTCTTACTTCACTGTGGTCTTAAA-----TTTCATGTGTTGACATTGGAGA---ATTACTCCTAAAGGCTTTTATAGTCCCATATAGTACACTTACATGTATAATTTACATCCTTAAAGGAGTCTGTAAAGCAAGTCAGT---GTTACTATCCTAA---------------------TTATTGA-TTTTTAGGGTGGAAGTGAGGGTATATAATTAATC-TCAAAAAAATTCAAAATCCC-TTGTTAAGAGGTCTTCCGAGGATAGCA--GAGTCGCTAGAAACA----GACCTACTGACAGAAATTTCATT-TCCAGTATTTTAAACTAGCCATTGTTAA-GATCTCTCTGGAAGGA--TCATTGTTCCTGGCTTTTGACGGCAGTTTGTTACTTTTGGTTTTTATGCCTTTGATACT--------------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e otoGar3.GL873654 5476653 507 + 5549422 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I a score=2815949.000000 s hg38.chr19_GL383574v1_alt 70468 306 + 155864 AGACTGCCAAAAATTATACTCAAGTCACCAGCTTATGCCATCCAGCCGTTGGTGGCCTTATGTAGTTGCGGGAC--TTCTGACTTGCAAAATCACCTTCCCAGCTAGGAG-AATCTGTCTTAGGAACTCCAGAATAGCCCTCGCTTATCACTGT-------------TACTGCCCTTAAGTTTGCCAGTGACACCTTGCTTACAGAATTCAGCAGTAGTATTTTCACAAATATTTTATTTGCCATTAACTCCTCTGCAATATTTGACACTG---ACCA-ACCACCCAATTTGGGGTCTTTCTTCCTAGTCTTT--AAAATACTCTTCT s panTro5.chr19 36139046 306 + 61309027 AGACTGCCAAAAATTATACTCAAGTCACCAGCTTATGCCATCCAGCCATTGGTGGCCTTATGTAGTTGCGGGAC--TTCTGACTTGCAAAATCACCTTCCCAGCTAGGAG-AATCTGTCTTAGGAACTCCAGAATAGCCCTCGCTTATCACTGT-------------TACTGCTCTTAAGTTTGCCAGTGACACCTTGCTTACAGAATTCAGCAGTAGTATTTTCACAAATATTTTATTTGCCATTAACTCCTCTGCAATATTTGACACTG---ACCA-ACCACCCAATTTGGGGTCTTTCTTCCTAGTCTTT--AAAATACTCTTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39885268 306 + 64411610 AGACTGCCAAAAATTATACTCAAGTCACCAGCTTATGCCATCCAGCCATTGGTGGCCTTATGTAGTTGCGGGAC--TTCTGACTTGCAAAATCACCTTCCCAGCTAGGAG-AATCTGTCTTGGGAACTCCAGAATAGCCCTCGCTTATCACTGT-------------TACTGCCCTTAAGTTTGCCAGTGACACCTTGCTTACAGAATTCAGCAGTAGTATTTTCACAAATATTTTATTTGCCATTAACTCCTCTGCAATATTTGACACTG---ACCA-ACCACCCAATTTGGGGTCTTTCTTCCTAGTCTTT--AAAATACTCTTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6302861 306 - 8369475 AGACTGCTAAAAAGTATACTCAAGTCACCAGCTTATGCCATCCAGCCGTTGGTGGCCTTATGTAGTTGCAGGAC--TTCTGACTTGCAAAATCACCTTCCCAGCTAGGAG-AATCTGTCTTAGGAACTCCAGAATAGCCCTCGCTTATCACTGT-------------TACTGCCCTTAAGTTTGCCAGTGACACCTTGCTTACAGAATTCAGCAGTAGTATTTTCACACATATTTTATTTGCCATTAACTCCTCTGCAATATTTGACACTG---ACCA-ACCACCCAATTTGGGGTCTTTCTTCCTAGTCTTT--AAAATACTCTTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63895125 306 - 106955855 AGACTGCCAAAAATTATACTCAAGTCACCAGCTTATGCCATCCAGCCGTTGATGGCCTTATGCAGTTGGAGGAC--TTCTGACTTGCAAAATCACCTTCCCAGCTAGGAG-AATCTGTCTTAGGAACTCCAGAATAGCCCTTGCTTATCACTGT-------------TACTGCCCTTAAGTTTGCCAGTGACACCTTGCTTACAGAATTCAGCAGTAGTATTTTCACAAATATTTTATTTGCCATTATCTCCTCTGCAATATTTGACGCTG---ACCA-ACCACCCAGTTTGGGGTCTTTCTTCCTAGTCTTT--AAAATACTCTTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30207219 304 + 53671032 AGACTGCCAAAAATTATACTCAACTCACCAGCTTATGCCATCCA--CCGTGGTGGCCTTATGCAGTTGCAGGAC--TTCTGACTTGCAAAATCCCCTTCCCAGCTAGGAG-AATCTGTCTTAGGAACTCCAGAATAGCCCTTGCTTATCACCGT-------------TACTGCCCTTAAGTTTGCCAGTGACACCTTGCTTACAGAATTCAGCAGTAGTATTTTCACAAATATTTTATTTGCCATCAGCTCCTCTGCAGTATTTGACACTG---ACCA-ACCACCCACTTTGGGGTCTTTCTTCCTAGTCTTT--AAAATACTCTTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34660937 304 + 59248254 AGACTGCCAAAAATTATACTCAACTCACCAGCTTATGCCATCCA--CCGTGGTGGCCTTATGCAGTTGCAGGAC--TTCTGACTTGCAAAATCCCCTTCCCAGCTAGGAG-AATCTGTCTTAGGAACTCCAGAATAGCCCTTGCTTATCACCGT-------------TACTGCCCTTAAGTTTGCCAGTGACACCTTGCTTACAGAATTCAGCAGTAGTATTTTCACAAATATTTTATTTGCCATCAGCTCCTCTGCAATATTTGACACTG---ACCA-ACCACCCACTTTGGGGTCTTTCTTCCTAGTCTTT--AAAATACTCTTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4527132 304 - 13342542 AGACTGCCAAAAATTATACTCAACTCACCAGCTTATGCCATCCA--CCGTGGTGGCCTTATGCAGTTGCAGGAC--TTCTGACTTGCAAAATCCCCTTCCCAGCTAGGAG-AATCTGTCTTAGGAACTCCAGAATAGCCCTTGCTTATCACCGT-------------TACTGCCCTTCAGTTTGCCAGTGACACCTTGCTTACAGAATTCAGCAGTAGTATTTTCACAAATATTTTATTTGCCATCAGCTCCTCTGCAATATTTGACACTG---ACCA-ACCACCCACTTTGGGGTCTTTCTTCCTAGTCTTT--AAAATACTCTTCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5457687 304 + 7714307 AGACTGCCAAAAATTATACTCAACTCACCAGCTTATGCCATCCA--CCGTGGTGGCCTTATGCAGTTGCAGGAC--TTCTGACTTGCAAAATCCCCTTCCCAGCTAGGAG-AATCTGTCTTAGGAACTCCAGAATAGCCCTTGCTTATCACTGT-------------TACTGCCCTTAAGTTTGCCAGTGACACCTTGCTTACAGAATTCAGCAGTAGTATTTTCACAAATATTTTATTGGCCATCAGCTCCTCTGCAATATTTGACACTG---ACCA-ACCACCCACTTTGGGGTCTTTCTTCCTAGTCTTT--AAAATACTCTTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29257519 304 + 50890351 AGACTGCCAAAAATTATACTCAACTCACCAGCTTATGCCATCCA--CCGTGGTGGCCTTATGCAGTTGCAGGAC--TTCTGACTTGCAAAATCCCCTTCCCAGCTAGGAG-AATCTGTCTTAGGAACTCCAGAATAGCCCTTGCTTATCACTGT-------------TACTGCCCTTAAGTTTGCCAGTGACACCTTGCTTACAGAATTCAGCAGTAGTATTTTCACAAATATTTTATTTGCCATCAGCTCCTCTGCAATATTTGACACTG---ACCA-ACCACCCACTTTGGGGTCTTTCTTCCTAGTCTTT--AAAATACTCTTCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 888829 304 - 2385121 AGACTGCCAAAAATTATACTCAACTCACCAGCTTATGCCATCCA--CCGTGGTGGCCTTATGCAGTTGCAGGAC--TTCTGACTTGCAAAATCCCCTTCCCAGCTAGGAG-AATCTGTCTTAGGAACTCCAGAATAGCCCTTGCTCATCACTGT-------------TACTGCCCTTAAGTTTGCCAGTGACACCTTGCTTACAGAATTCAGCAGTAGTATTTTCACAAATATTTTATTTGCCATCAGCTCCTCTGCAATATTTGACACTG---ACCA-ACCATCCACTTTGGGGTCTTTCTTCCTAGTCTTT--AAAATACTCTTCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2328113 304 + 4274983 AGACTGCCAAAAATTATACTCAGCTCACCAGCTTATGCCATCCA--CCATGGTGGCCTTATGCAGTTGCAGGAC--TTCTGACTTGCAAAATCCCCTTTCCAGCTAGGAG-AATCTGTCTTAGGAACTCCAGAATAGCCCTTGCTTATCACTGT-------------TACTGCCCTTAAGTTTGCCAGTGACACCTTGCTTACAGAATTCAGCAGTAGTATTTTCACAAATATTTTATTTGCCATCAACTCCTCTGCAGTATTTGACACTG---ACCA-ACCACCCACTTTGGGGTCTTTCTTCCTAGTCTTT--AAAATACTCTTCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28559473 251 + 49145316 AGACTGCCAAAAATTATGCTCAGGTCACCAGCTTATG----------------------------------------------------------CTTCCCAGCTGGGAGAAATCTGTCTTAGGAACTCCAAAATAGTCCTTACTTATCACTGT-------------TACTGTCCTTAAGGTTGCCAGTGACACCTTGCTTACAAAATTCAGCAGTAGTATTTTCACAAATATTTTATTTGCCATTAACTCCTCTCCAATATTTGACACTG---ACCA-ACTACCCAGTTTGGGGTCTTTCTTCCTAGTTTTT--AAAATACTCTTCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5403383 238 + 8899380 AGACTGCCAAAAATTATGCTCAGGTCACCAGCTTATG----------------------------------------------------------CTTCCCAGCTGGGAG-AATCTGTCTTAGGAACTCCAAAATAGTCCTTGCTTATCACTGT-------------TACTGTCCTTAAGGTTGCCAGTGACACCTTGCTTACAAAATTCAGTAGCAGTATTTTCACAAATACTTTATTTGCCATTAACTCCTCTCCAATATTTGACACTG---ACCA-ACCACCCAACTTGGGGTCTTTCTTCCTAGTtttt--a------------ i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 360487 250 - 4471408 AGACTGCCAAAAATTATGCTCAGGTCACCAGCTTATG----------------------------------------------------------CTTACCAGCTGGGAG-AATCTGTCTTAGGAACTCCAAAATAGTCCTTGCTTATCACTGT-------------TACTATCCTTAAGGTTGCCAGTGACACCTTGCTTACAAAATTCAGTAGTAGTATTTTCACAAATATTTTATTTGCCATTAACTCCTCTCCAATATTTGACACTG---ACCA-ACCACCCAACTTGGGGTCTTTCTTCCTAGTTTTT--AAAATACTCTTCT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4610980 304 - 122678785 AGACTACTGAAAATTAGCGTCAAGTCA-----TTAAGCTATCCAG-CCATGGTGGCCTGGTGCAGCTGCAGAAT--TTGTAACTTGCAGAATTGTCATTTTAGCCGAGAG-ACTATGTCCTAGGAGTTACAGAATGCCATTTGCTTGTCACTATGTCCTATACCTACTACTGCTCTTC------CCAGTGGCCTTTTGCTTATAGAATTC---AGTAGCCTTTTCACAAATATTT-----GTCCTTAACCCCTCTGAAGTATTTGACACTGCTAACCA-CCCACCCACCTTGGAGTCTTTCTTCCTAGTTTTGTAAAAATATTATTTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 331631 287 + 643850 -------TGAAAATTAGCCTCCAGTCATTAGCTAAGGTGCTCTAG-CCATAGCGTCCTAATGCAACTCCAAGACTTTTCTAACTTGCAAAAATCCTTTCCTAGCTGGGAC-A--CTGTCTCAGAAACTCTACAATGTCTCTTGCTTATCATTTT-------------TACTGCTCTTAAGGTAGCCAGTGGTCTCTTGCTTACAAAATT------TATAATCTTCACAAATACAT-----GCCCTTAATTCCTCTGCAGTATTTGAAACTG---ATAACCCCACCCAACTTGCAGT-TTTTTCCCTAATACTT--TTGATACGTTTTT i dasNov3.JH563638 C 0 I 3627 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e otoGar3.GL873654 5476653 507 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I a score=123720.000000 s hg38.chr19_GL383574v1_alt 70774 15 + 155864 AGGTTTTCAATTTAT s panTro5.chr19 36139352 15 + 61309027 AGGTTTTCAATTTAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39885574 15 + 64411610 AGGTTTTCAATTTAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6303167 15 - 8369475 AGGTTTTCAATTTAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63895431 15 - 106955855 AGGTTTTCAATTTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30207523 15 + 53671032 AGGTTTTCAATTTAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34661241 15 + 59248254 AGGTTTTCAATTTAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4527436 15 - 13342542 AGGTTTTCAATTTAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5457991 15 + 7714307 AGGTTTTCAATTTAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29257823 15 + 50890351 AGGTTTTCAATTTAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 889133 15 - 2385121 AGGTTTTCAATTTAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2328417 15 + 4274983 AGATTTTCAATTTAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28559724 15 + 49145316 AGATTTTTAGTTTAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5403621 11 + 8899380 ----ttttattttat i saiBol1.JH378197 C 0 I 672 s aotNan1.NW_018505377v1 360737 15 - 4471408 AGGTTTTTGGTTTAT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4611284 12 - 122678785 GAGTGTT---TTTGT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e dasNov3.JH563638 331918 3627 + 643850 I e otoGar3.GL873654 5476653 507 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I a score=59539.000000 s hg38.chr19_GL383574v1_alt 70789 8 + 155864 ACTCTTCC s panTro5.chr19 36139367 8 + 61309027 ACTCTTCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39885589 8 + 64411610 ACTCTTCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6303182 8 - 8369475 ACTCTTCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63895446 8 - 106955855 ACTCTTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30207538 8 + 53671032 ACTTTTAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34661256 8 + 59248254 ACTCTTCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4527451 8 - 13342542 ACTCTTCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5458006 8 + 7714307 ACTCTTCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29257838 8 + 50890351 ACTCTTCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 889148 8 - 2385121 ACTCTTCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2328432 8 + 4274983 ACTCTTCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28559739 8 + 49145316 ACTCTTCC i calJac3.chr22 C 0 I 2 s aotNan1.NW_018505377v1 360752 8 - 4471408 ACTCTTCC i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4611296 8 - 122678785 TTTGtttt i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e dasNov3.JH563638 331918 3627 + 643850 I e otoGar3.GL873654 5476653 507 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I e saiBol1.JH378197 5403632 672 + 8899380 I a score=58886.000000 s hg38.chr19_GL383574v1_alt 70797 9 + 155864 T-AATTTTTT s panTro5.chr19 36139375 9 + 61309027 T-AATTTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39885597 9 + 64411610 T-AATTTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6303190 9 - 8369475 T-AATTTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63895454 9 - 106955855 T-AATTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30207546 9 + 53671032 T-AATTTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34661264 9 + 59248254 T-AATTTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4527459 9 - 13342542 T-AATTTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5458014 9 + 7714307 T-AATTTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29257846 9 + 50890351 T-AATTTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 889156 9 - 2385121 T-AATTTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2328440 9 + 4274983 T-AATTTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28559749 7 + 49145316 --AAttttt- i calJac3.chr22 I 2 I 2 s saiBol1.JH378197 5404304 7 + 8899380 --TATTTTT- i saiBol1.JH378197 I 672 I 2 s aotNan1.NW_018505377v1 360760 9 - 4471408 TAaattttt- i aotNan1.NW_018505377v1 C 0 I 153 s canFam3.chr1 4611304 8 - 122678785 --tattttta i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e dasNov3.JH563638 331918 3627 + 643850 I e otoGar3.GL873654 5476653 507 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I a score=9555.000000 s hg38.chr19_GL383574v1_alt 70806 1 + 155864 A s panTro5.chr19 36139384 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39885606 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6303199 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63895463 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30207555 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34661273 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4527468 1 - 13342542 A i macNem1.NW_012011689v1 C 0 I 368 s cerAty1.NW_012005268v1 5458023 1 + 7714307 A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29257855 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 889165 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2328449 1 + 4274983 A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28559758 1 + 49145316 a i calJac3.chr22 I 2 C 0 s saiBol1.JH378197 5404313 1 + 8899380 A i saiBol1.JH378197 I 2 C 0 s canFam3.chr1 4611312 1 - 122678785 a i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e dasNov3.JH563638 331918 3627 + 643850 I e otoGar3.GL873654 5476653 507 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e aotNan1.NW_018505377v1 360769 153 - 4471408 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I a score=95477.000000 s hg38.chr19_GL383574v1_alt 70807 31 + 155864 --ATACTCTTCATTC---TTTTTTTTGGGG-----GGTGGA s panTro5.chr19 36139385 31 + 61309027 --ATACTCTTCATTC---TTTTTTTGGGGG-----GGTGGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39885607 31 + 64411610 --ATACTCTTCATTC---TTTTTTTGGGGG-----GGTGGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6303200 31 - 8369475 --ATAATCTTCATTC---TTTTTTTTGGGG-----GGTGGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63895464 32 - 106955855 --ATACTCTTCATTC---TTTTTTGGGGGG----CGGTGGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30207556 36 + 53671032 --ATACTCTTCATTC---TTTTTGGCGGGGAGGGCTGTGGA i rheMac8.chr19 C 0 I 5 s macFas5.chr19 34661274 36 + 59248254 --ATACTCTTCATTC---TTTTTGGCGGGGAGGGCTGTGGA i macFas5.chr19 C 0 I 5 s cerAty1.NW_012005268v1 5458024 36 + 7714307 --ATACTCTTCATTC---TTTTTGGCGGGGAGGGCTGTGGA i cerAty1.NW_012005268v1 C 0 I 5 s chlSab2.chr6 29257856 36 + 50890351 --ATACTCTTCATTC---TTTTTGGCGGGGAGGGCTGTGGA i chlSab2.chr6 C 0 I 5 s manLeu1.NW_012102454v1 889166 36 - 2385121 --ATACTCTTCATTC---TTTTTGGCGGGGAGGGCTGTGGA i manLeu1.NW_012102454v1 C 0 I 5 s colAng1.NW_012111697v1 2328450 36 + 4274983 --ATACTCTTTATTC---TTTTTGGCATGGAGGGCTGTGGG i colAng1.NW_012111697v1 C 0 I 5 s calJac3.chr22 28559759 13 + 49145316 --atactcttttttt-------------------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5404314 26 + 8899380 --ATACTGttttttttttttttttttgg------------- i saiBol1.JH378197 C 0 C 0 s canFam3.chr1 4611313 17 - 122678785 aaataataCATGTTC---CA--------------------- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e dasNov3.JH563638 331918 3627 + 643850 I e otoGar3.GL873654 5476653 507 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e aotNan1.NW_018505377v1 360769 153 - 4471408 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I e macNem1.NW_012011689v1 4527469 368 - 13342542 I a score=21271.000000 s hg38.chr19_GL383574v1_alt 70838 5 + 155864 GGGTG s panTro5.chr19 36139416 5 + 61309027 GGGTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39885638 5 + 64411610 GGGTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6303231 5 - 8369475 GGGTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63895496 5 - 106955855 GAGTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30207597 5 + 53671032 GGGTG i rheMac8.chr19 I 5 C 0 s macFas5.chr19 34661315 5 + 59248254 GGGTG i macFas5.chr19 I 5 C 0 s macNem1.NW_012011689v1 4527837 5 - 13342542 GGGTG i macNem1.NW_012011689v1 I 368 C 0 s cerAty1.NW_012005268v1 5458065 5 + 7714307 GGGTG i cerAty1.NW_012005268v1 I 5 C 0 s chlSab2.chr6 29257897 5 + 50890351 GGGTG i chlSab2.chr6 I 5 C 0 s manLeu1.NW_012102454v1 889207 5 - 2385121 GGGTG i manLeu1.NW_012102454v1 I 5 C 0 s colAng1.NW_012111697v1 2328491 5 + 4274983 GGGTG i colAng1.NW_012111697v1 I 5 C 0 s calJac3.chr22 28559772 1 + 49145316 -a--- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5404340 1 + 8899380 -a--- i saiBol1.JH378197 C 0 C 0 s canFam3.chr1 4611330 5 - 122678785 GGGCg i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e dasNov3.JH563638 331918 3627 + 643850 I e otoGar3.GL873654 5476653 507 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e aotNan1.NW_018505377v1 360769 153 - 4471408 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I a score=546169.000000 s hg38.chr19_GL383574v1_alt 70843 70 + 155864 Tcagggtcttgctgtgtcacccagactggagtgcaatggcatgatcataagtcactgcagcctcaacctc s panTro5.chr19 36139421 70 + 61309027 Tcagggtcttgctgtgtcacccagactggagtgcaatggcatgatcataagtcactgcagcctcaacctc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39885643 70 + 64411610 Tcagggtcttgctgtgtcacccagactggagtgcaatggcatgatcataagtcactgcagcctcaacctc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6303236 70 - 8369475 Tcagggtcttgctgtgtcacccagactggagtgcaatggcatgatcataagtcactgcagcctcaacatc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63895501 70 - 106955855 Tcagggtcttgctctgtcactcagactggagtgcaatggcatgatcataagtcactgcagcctcaacctc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30207602 70 + 53671032 Tcagggtcttgctctgttacccagactggagtgcgatggcatgatcataagtcactgcggcctcaacttc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34661320 70 + 59248254 Tcagggtcttgctctgttacccagactggagtgcaatggcatgatcataagtcactgcggcctcaacttc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4527842 70 - 13342542 Tcagggtcttgctctgttacccagactggagtgcaatggcatgatcataagtcactgcggcctcaacttc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5458070 70 + 7714307 Tcagggtcttgctctgtcacccagactggagtgcaatggcatgatcgtaagtcactgcagcctcaacttc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29257902 70 + 50890351 Tcagggtcttgctctgtcacccagactggagtgcaatggcatgatcgtaagtcactgcagcctcaacttc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 889212 70 - 2385121 Tcagggtcttgctctgtcacccagactggagtgcaatggcatgatcgtaagtcactgcagcctcaacttc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2328496 69 + 4274983 Tcagggtcttgctctgtc-cccagactggagtgcaatggcatgatcgtaagtcactgcagcctcaacttc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28559773 51 + 49145316 tcagggtcttgctctgtcacccaggatggagtgcaatgtcttgattg-------------------cctc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5404341 56 + 8899380 tcagggttttgctctgtcccccaggatggagtgcaatggcttgattgtaagt--------------cact i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 360922 70 - 4471408 tcagggtcttgctctgtcacccaggatggagtgcaatggcttgattgtaggtcactgcagcctcagcctc i aotNan1.NW_018505377v1 I 153 C 0 s canFam3.chr1 4611335 52 - 122678785 ------cctggct----------ggctcagttggtagagcatgatcttggg--attgtgactttgagccc i canFam3.chr1 C 0 I 355 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e dasNov3.JH563638 331918 3627 + 643850 I e otoGar3.GL873654 5476653 507 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I a score=1709883.000000 s hg38.chr19_GL383574v1_alt 70913 206 + 155864 ccaggctcaggc---agtcctcccacctcagcctcctatgtagctgggactacaggcatgcaccaccatgcccagctaa-tttttaattttttttgtagacactgggtcccactctcactatgttgtccaggctggtcttgaactcctgggcttaagcgatcctctcacctcagcttcccaaagtgctgggtttataggtgt--gCCATGGT s panTro5.chr19 36139491 206 + 61309027 ccaggctcaggc---agtcctcccacctcagcctcctatgtagctgggactacaggcatgcaccaccatgcccagctaa-tttttaattttttttgtagacacaggttcccactctcactatgttgtccaggctggtcttgaactcctgggcttaagcaatcctctcacctcagcttcccaaagtgctgggtttataggtgt--gCCATGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39885713 206 + 64411610 ccaggctcaggc---agtcctcccacctcagcctcctatgtagctgggactacaggcatgcaccaccatgcccagctaa-tttttaattttttttgtagacacaggttcccactctcactatgttgtccaggctggtcttgaactcctgggcttaagcaatcctctcacctcagcttcccaaagtgctgggtttataggtgt--gCCATGGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6303306 205 - 8369475 ccaggctcaggc---agtcctcccacctcagcctcctatgtagctgggactacaggcatgcaccaccatgcccagctaa-tttttaa-tttttttgtagacacagggtcccactctcactatgttgtccaggctggtcttgaactcctgggcttaagcaatcctctcacctcagcttcccaaagtgctgggtttataggtgt--gCCATGGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63895571 205 - 106955855 ccaggctcaggc---agtcctcccacctcagcctcccatgtagctgggactacatgcacgtaccaccatgcccggctaa-tttttaa-tttttttgtagacacagggtcccaccctcactatgttgtccaggctggtcttgaactcctgggcttaagcaatcctctcccctcagcttcccaaagtgctgggtttataggtgt--gccacggt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30207672 201 + 53671032 ccaggctcaggc---agtcctcccacctcagcctcccatgtagctgggactacaggcacgcactaccatgcccagctaa-tttttaa-tttttttgtagacac--ggtcccact----ctgtgttgtccaggctggtcttgaactcctgggcttaagcaatcctctcacctcagcttcccaaagtgctgggattttaggtgtgagccacggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34661390 201 + 59248254 ccaggctcaggc---agtcctcccacctcagcctcccatgtagctgggactacaggcacgcactaccatgcccagctaa-tttttaa-tttttttgtagacac--ggtcccact----ctgtgttgtccaggctggtcttgaactcctgggcttaagcaatcctctcacctcagcttcccaaagtgctgggattttaggtgtgagccacggt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4527912 201 - 13342542 ccaggctcaggc---agtccctccacctcagcctcccatgtagctgggactacaggcacgcactaccatgcccagctaa-tttttaa-tttttttgtagacac--ggtcccact----ctgtgttgtccaggctggtcttgaactcctgggcttaagcaatcctctcacctcagcttcccaaagtgctgggattttaggtgtgagccacggt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5458140 201 + 7714307 ccaggctcaggc---agtcctcccacctcagcctcccatgtagctgggactacaggcacgcactaccatgcccagctaa-tttttaa-tttttttgtagacac--ggtcccact----ctgtgttgtccaggctggtcttgaactcctgggcttaagcaatcctcttacctcagcttcccaaagtgctgggattttaggtgtgagccacggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29257972 203 + 50890351 ccaggctcaggc---agtcctcccacctcagcctcccatgtagctgggactacaggcacgcactaccatgcccagctaa-tttttaa-tttttttgtagacacagggtcccact----ctgtgttgtccaggctggtcttgaactcctgggcttaagcaatcctctcacctcagcttcccaaagtgctgggattttaggtgtgagccacggt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 889282 201 - 2385121 ccaggctcaggc---agtcctcccacctcagcctcccatgtagctgggactacaggcacgcactaccatgcccagctaa-tttttaa-tttttttgtagacat--ggtctcact----ctgtgttgtccaggctggttttgaactcctgggcttaagcaatcctctcacctcagcttcccaaagtgctgggattttaggtgtgagccacggt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2328565 203 + 4274983 ccaggctcaggc---agtcctcccacctcagcctcccatgtagttgggactacaggcatgcaccaccatgcctagctaa-tttttaa-tttttttgtagacacagggtcccact----gcatgttgtccaggctggtcttgaactcctgggcttaagcaatcctctcacttcagcttcccaaagtgctgggattataggtgtgagccacggt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28559824 208 + 49145316 ccaggctcaggc---aatcctcccacctcagcttcccacatagctgggaccacagacatgcaccatcatgcccagctaattttttaa-tttttttgtagacatggggtctcactcgcactgtgttgcccatgctggtcttgaattcctaggcttaagcaatcctctcgcctcagcttcccaaagtgctgggtgtataggcatgagccacagt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5404397 211 + 8899380 gcaggctcaggcaaaaatcctcccacctcagcttcccacatacctgggaccacaggcatgcaccatcatgcccagctaattttttaattttttttgtagacatggggtctcactctcactatgttgtccatgct-gtcttgaattcccaggcttaagcagtcctctcacctcattttcccaaagtgctgggtttataggcatgagccacggt i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 360992 208 - 4471408 ccaggcttaggc---aatcctcccaccttagcttcccacatagctgggaccacaggcatgcaccatcatgcccagctagttttttaa-ttgttttgtagacatggggtctcactctcactatgttgtccatgctggtcttgaattcctaggcttaagcaatcctctcacctcagcttcccaaagtgctgggtttataggcgtgagccacagt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e dasNov3.JH563638 331918 3627 + 643850 I e otoGar3.GL873654 5476653 507 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e canFam3.chr1 4611387 355 - 122678785 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I a score=103758.000000 s hg38.chr19_GL383574v1_alt 71119 11 + 155864 GCTTGTTCCAT s panTro5.chr19 36139697 11 + 61309027 GCTTGTTCCAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39885919 11 + 64411610 GCTTGTTCCAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6303511 11 - 8369475 GCTTGTTCCAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63895776 11 - 106955855 gcTTGTTCCAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30207873 11 + 53671032 gcTTGTTCCAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34661591 11 + 59248254 gcTTGTTCCAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4528113 11 - 13342542 gcTTGTTCCAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5458341 11 + 7714307 gcTTGTTCCAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29258175 11 + 50890351 gcTTGTTCCGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 889483 11 - 2385121 gcTTGTTCCAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2328768 11 + 4274983 gcTTGTTCCAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28560032 11 + 49145316 gcctgtccCAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5404608 11 + 8899380 gcctgTTTCAT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 361200 11 - 4471408 gcctgtccCAT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4611742 11 - 122678785 ccttcttcctt i canFam3.chr1 I 355 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e dasNov3.JH563638 331918 3627 + 643850 I e otoGar3.GL873654 5476653 507 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I a score=256849.000000 s hg38.chr19_GL383574v1_alt 71130 29 + 155864 --CCTCCCTTTT---------------------------GTAAGCCTGT-----------------------------CC-----------------------------TGGACCC s panTro5.chr19 36139708 29 + 61309027 --CCTCCCTTTT---------------------------GTAAGCCTGT-----------------------------CC-----------------------------TGGACCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39885930 29 + 64411610 --CCTCCCTTTT---------------------------GTAAGCCTGT-----------------------------CC-----------------------------TGGACCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6303522 29 - 8369475 --CCTCCCTTTT---------------------------GTAAGCCTGT-----------------------------CC-----------------------------TGGACTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63895787 29 - 106955855 --CCTCCCTTTT---------------------------GTAAGCCTGT-----------------------------CC-----------------------------TGGACCG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30207884 29 + 53671032 --CCTCCCTTTT---------------------------GTAAGCCTGT-----------------------------CT-----------------------------TGGACCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34661602 29 + 59248254 --CCTCCCTTTT---------------------------GTAAGCCTGT-----------------------------CT-----------------------------TGGACCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4528124 29 - 13342542 --CCTCCCTTTT---------------------------GTAAGCCTGT-----------------------------CT-----------------------------TGGACCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5458352 29 + 7714307 --CCTCCCTTTT---------------------------GTAAGCCTGT-----------------------------CT-----------------------------TGGACCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29258186 29 + 50890351 --CCTCCCTTTT---------------------------GTAAGCCTGT-----------------------------CT-----------------------------TGGACCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 889494 29 - 2385121 --CCTCCCTTTT---------------------------GTAAGCCTGT-----------------------------CT-----------------------------TGGACCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2328779 29 + 4274983 --CCTCCCTTCT---------------------------GTAAGCCTGT-----------------------------CT-----------------------------TGGACCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28560043 29 + 49145316 --TCTCCCTTTT---------------------------GTAACCCTGT-----------------------------CC-----------------------------TGGACCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5404619 29 + 8899380 --TCTCCCTTTT---------------------------GTAACTCTGT-----------------------------CC-----------------------------TGGACCC i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 361211 29 - 4471408 --TCTCCCTTTT---------------------------GTAACCCTGT-----------------------------CC-----------------------------TGGACCC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5477160 58 + 5549422 --CCTCTCTTTT---------------------------ATGAACTTGT-----------------------------CCAGTGGTAGCTTCTAACCAGTTTTTCATCTGGGACCT i otoGar3.GL873654 I 507 C 0 s canFam3.chr1 4611753 87 - 122678785 ctccccccttctctctccttccctttctttcctcctccccTGAGCTTGTTGATTCATAGCTTTTAATCAGTTTTTCAGCT-----------------------------TGGACCT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e dasNov3.JH563638 331918 3627 + 643850 I e mm10.chr7 111091519 1541 - 145441459 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I a score=331769.000000 s hg38.chr19_GL383574v1_alt 71159 41 + 155864 TATGTGTTTCTGCACCGCATCTC---TATCTGCACTGT-TTGCTG s panTro5.chr19 36139737 41 + 61309027 TATGTGTTTCTGCACCGCATCTC---TATCTGCACTGT-TTGCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39885959 41 + 64411610 TATGTGTTTCTGCACCGCATCTC---TATCTGCACTGT-TTGCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6303551 41 - 8369475 TATATGTTTCTGCACCGCATCTC---TATCTGCACTGT-TTGCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63895816 42 - 106955855 TATATGTTTCTGCACTGCATCTC---TATCTTCACTGTCCTGCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30207913 42 + 53671032 TATATGTTTCTGCACTGCATCTC---TATCTTCACTGTCCTGCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34661631 42 + 59248254 TATATGTTTCTGCACTGCATCTC---TATCTTCACTGTCCTGCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4528153 42 - 13342542 TATATGTTTCTGCACTGCATCTC---TATCTTCACTGTCCTGCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5458381 42 + 7714307 TATATGTTTCTGCACTGCATCTC---TATCTTCACTGTCCTGCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29258215 42 + 50890351 TATATGTTTCTGCACTGCATCTC---TATCTTCACTGTCCTGCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 889523 42 - 2385121 TATATGTTTCTGCACTGCATCTC---TATCTTCACTGTCCTGCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2328808 42 + 4274983 TATATGTTTCTGCACTGCATCTC---TGTCTTCACTGTCCTGCCG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28560072 41 + 49145316 TA--TGTTTTTATACTGTATCTC--TTATCTTCACTGTCCTGCTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5404648 41 + 8899380 TA--TGTTTTTGCCCGGTATCTC--TTATCTTCACTTTCCTGCTG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 361240 41 - 4471408 TA--TGTTTCTGCACTATATCTC--TTATCTTCACTGTCCCGCTG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5477218 44 + 5549422 TGTATGTTTCTGCACTACATTTTTCTTATCTGCCTTGT-ATCCTG i otoGar3.GL873654 C 0 I 1001 s canFam3.chr1 4611840 39 - 122678785 TGTGTGCTTTT---CTCTGTCTT---TATATGCTTTATGTTCTTT i canFam3.chr1 C 0 I 8 s dasNov3.JH563638 335545 37 + 643850 TATATTTCTCTGT----CTTCTC---TAACTTTG-TATCCTGCCA i dasNov3.JH563638 I 3627 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e mm10.chr7 111091519 1541 - 145441459 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I a score=843740.000000 s hg38.chr19_GL383574v1_alt 71200 87 + 155864 TCAGCTTAACCTTCCTCAGACTGAT----------------------------------------------------------------CTCATCATCTTCCTTCTCTCCT----GTCATCTCAGC-TCTGCCTCCTCCCAGTGTTCCATGTTGGC s panTro5.chr19 36139778 87 + 61309027 TCAGCTTAACCTTCCTCAGACTGAT----------------------------------------------------------------CTCATCATCTTCCTTCTCTCCT----GTCATCTCAGC-TCTGCCTCCTCCCAGTGTTCCATGTTGGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39886000 87 + 64411610 TCAGCTTAACCTTCCTCAAACTGAT----------------------------------------------------------------CTCATCATCTTCCTTCTCTCCT----GTCATCTCAGC-TCTGCCTCCTCCCAGTGTTCCATGTTGGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6303592 87 - 8369475 TCAGCTTAACCTTCCTCAGACTGAT----------------------------------------------------------------CTCATCATCTTCCTTCTCTCCA----GTCATCTCAGC-TCTGCCTCCTCCCAGTGTTCCATGTTGGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63895858 87 - 106955855 TCAGCTTAAACTTCCTCAGACTGAT----------------------------------------------------------------CTTGTCATCTTCCTTCTCTCCA----GTCATCTCAGC-TCTGCCTCCTCCCGGTGTTCCATGTTGGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30207955 87 + 53671032 TCAGCTTAACCTTCCTCAGACTGAC----------------------------------------------------------------CTCATCATCTTCCTTCTCTCCA----GTCATCTCAGC-TCTGCCTCCTCCCAGTGTTCCATGTTGGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34661673 87 + 59248254 TCAGCTTAACCTTCCTCAGACTGAC----------------------------------------------------------------CTCATCATCTTCCTTCTCTCCA----GTCATCTCAGC-TCTGCCTCCTCCCAGTGTTCCATGTTGGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4528195 87 - 13342542 TCAGCTTAACCTTCCTCAGACTGAC----------------------------------------------------------------CTCATCATCTTCCTTCTCTCCA----GTCATCTCAGC-TCTGCCTCCTCCCAGTGTTCCATGTTGGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5458423 87 + 7714307 TCAGCTTAACCTTCCTCAGACTGAC----------------------------------------------------------------CTCATCATCTTCCTTCTCTCCA----GTCATCTCAGC-TCTGCCTCCTCCCAGTGTTCCATGTTGGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29258257 87 + 50890351 TCAGCTTAACCTTCCTCAGACTGAC----------------------------------------------------------------CTCATCATCTTCCCTCTCTCCA----GTCATCTCAGC-TCTGCCTCCTCCCAGTGTTCCATGTTGGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 889565 87 - 2385121 TCAGCTTAACCTTCCTCAGACTGAC----------------------------------------------------------------CTCATCATCTTCCTTCTCTCCA----GTCATCTCAGC-TCTGCCTCCTCCCAGTGTTCCATGCTGGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2328850 87 + 4274983 TCAGCTTAACCTTCCTCAGACTGAC----------------------------------------------------------------CTCATCGTCTTCCTTCTCTCCA----GTCATCTCAGC-TCTGCCTCCTCCCAGTGTTCCATGATGAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28560113 151 + 49145316 TCAGTTTGAACTTCCTCAGACTGACCTCGTAATTTTCCTCCTCTCCGGTCATCTCAGCTCGTAATTTTCCTCCTCTCTGGTCATCTCAGCTCGTAATTTTCCTCCTCTCCG----GTCATCTCAGC-TCTGCCTCCTCCCAGTGTTCCATGTTGGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5404689 87 + 8899380 TCAGCTTAAAATTCCTCAGACTGAC----------------------------------------------------------------CTCGTAATTTTCCTCCTCTACG----GTCATCTCAGC-TCTGCCTCCTCCCAGTGTTCCATGTTGGC i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 361281 87 - 4471408 TCAGCTTAAACTTCCTCAGACTGCC----------------------------------------------------------------CTCGTAATTTTCCTCCTCTCCG----GTCATCTCAGC-TCTGCCTCCTCCCAGTGTTCCATGTTGGC i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4611887 87 - 122678785 TAAACTTGACCTTCCTCAAAATGAC----------------------------------------------------------------TTCACCATCTTCTTGCCTCCCGTGGCACCACCCCAGCATCTGCACTCGCTTAA-----CAATTTGGC i canFam3.chr1 I 8 I 23 s dasNov3.JH563638 335582 77 + 643850 TCAGCTTGGCCTTCTTCACACCAAC----------------------------------------------------------------TTCATTATCAT-------TCCC----ATCATATCAGC-TCTGC---CTCCCAATGATTTGTGTTGGC i dasNov3.JH563638 C 0 I 8 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e otoGar3.GL873654 5477262 1001 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I a score=452216.000000 s hg38.chr19_GL383574v1_alt 71287 51 + 155864 TCATGGTATACTGCC-----------------------------CAGGCACTAGAGGTATCCATGATTGTGGCCTGTTGC s panTro5.chr19 36139865 51 + 61309027 TCATGGTATACTGCC-----------------------------CAGGCACTAGAGGTATCCATGATTGTGGCCTGTTGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39886087 51 + 64411610 TCATGGTATACTGCC-----------------------------CAGGCACTAGAGGTATCCATGATTGTGGCCTGTTGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6303679 51 - 8369475 TCATGGTATACTGCC-----------------------------CAGGCACTAGAGGTATCCATGATTGTGGCCTGTTGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63895945 50 - 106955855 TCATGGTATACTGCC-----------------------------CAGGCACTAGAGGTATCCATGATTGTGGCCTG-TGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208042 51 + 53671032 TCATGGTATACTGCC-----------------------------CAGGCACTAGAGGTATCCATGATTATGGCCTATTGC i rheMac8.chr19 C 0 I 10 s macFas5.chr19 34661760 51 + 59248254 TCATGGTATACTGCC-----------------------------CAGGCACTAGAGGTATCCATGATTATGGCCTATTGC i macFas5.chr19 C 0 I 10 s macNem1.NW_012011689v1 4528282 51 - 13342542 TCATGGTATACTGCC-----------------------------CAGGCACTAGAGGTATCCATGATTATGGCCTATTGC i macNem1.NW_012011689v1 C 0 I 10 s cerAty1.NW_012005268v1 5458510 51 + 7714307 TTATGGTATACTGCC-----------------------------CAGGCACTAGAGGTATCCATGATTATGGCCTATTGC i cerAty1.NW_012005268v1 C 0 I 10 s chlSab2.chr6 29258344 51 + 50890351 TCATGGTATACTGCC-----------------------------CAGGCACTAGAGGTATCCATGATTATGGCCTATTGC i chlSab2.chr6 C 0 I 10 s manLeu1.NW_012102454v1 889652 51 - 2385121 TCATGGTATACTGCC-----------------------------CAGGCACTAGAGGTATCCATGATTATGGCCTATTGC i manLeu1.NW_012102454v1 C 0 I 10 s colAng1.NW_012111697v1 2328937 50 + 4274983 TCATGGTATACTGCT-----------------------------CAGGCACTAG-GGTATCCGTGATTATGGCCTATTGC i colAng1.NW_012111697v1 C 0 I 10 s calJac3.chr22 28560264 80 + 49145316 TCATGGTATACTGCCCAGGTACTGGAGGCTCACGGTAAACTGCCCAGGCACTAGAAGTATCCATGATTGTGGTCTGTTGC i calJac3.chr22 C 0 I 9 s saiBol1.JH378197 5404776 80 + 8899380 TCATGGTATACTACCCAGGCATTGGAGGCTCATGGTAAACTGCCCAGGCACTAGAGGTATCCATGATTGTGGGCTGTTGC i saiBol1.JH378197 C 0 I 9 s aotNan1.NW_018505377v1 361368 80 - 4471408 TCATGGTATACTGCCCAGGCACTGGAGGCTCATGGTAAACTGCGCAGGCACTAGAGGTATCCATGATTGTGGCCTGTTGC i aotNan1.NW_018505377v1 C 0 I 9 s dasNov3.JH563638 335667 60 + 643850 TAATGGTATACTACT--------------------CTGATCTCCCAGGCAGTTGAGGCATCCATGATGATTCATCATCAC i dasNov3.JH563638 I 8 I 53 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e otoGar3.GL873654 5477262 1001 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e canFam3.chr1 4611974 23 - 122678785 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I a score=2197496.000000 s hg38.chr19_GL383574v1_alt 71338 232 + 155864 CATTTATTCCTTTGAGATGTCCCTGTCAACTACCATGGTAACCCACCAGTTGGGCTTCAGACCTTCG-TCTCTCTTTA-CCCCACTTTAAGGCAGATCAGCTACATTTTGAACAACCTGTGACAACTCCTTGTTGAAGACCACATTGAGTCAGCTTGG-------------------------------------TCTGAGAAAAAGTACATTTAAATTAGACTTGGATCCAGATGAGAATAATAGCAGTAGTT-ACTAGTATG-------------------ACCTTTCA s panTro5.chr19 36139916 232 + 61309027 CATTTATTCCTTTGAGATGTCCCTGTCAACTACCATGGTAACCCACCAGTTGGGCTTCAGACCTTCG-TCTCTCTTTA-CCCCACTTTAAGGCAGATCAGCTACATTTTGAACAACCTGTGACAACTCCTTGTTGAAGACCACATTGAGTCAGCTTGG-------------------------------------TCTGAGAAAAAGTACATTTAAATTAGACTTGGATCCAGATGAGAATAATAGCAATAGTT-ACTAGTATG-------------------ACCTTTCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39886138 232 + 64411610 CATTTATTCCTTTGAGATGTCCCTGTCAACTACCATGGTAACCCACCAGTTGGGCTTCAGACCTTCG-TCTCTCTTTA-CCCCACTTTAAGGCAGATCAGCTACATTTTGAACAACCTGTGACAACTCCTTGTTGAAGACCACATTGAGTCAGCTTGG-------------------------------------TCTGAGAAAAAGTACATTTAAATTAGACTTGGATCCAGATGAGAATAATAGCAATAGTT-ACTAGTATG-------------------ACCTTTCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6303730 232 - 8369475 CATTTATTCCTTTGAGATGTCCCTGTCAACTACCATGGTAACCCATCAGTTGGGCTTCAGACCTTCG-TCTCTCTTTA-CCCCACTTTAAGGCAGATCAGCTACATTTTGAACAA-CTATGACAACTCCTTGTTGAAGACCACATTGAGTCAGCTTGG-------------------------------------TCTGAGAAAAAGTACATTTAAATTAGACTTGGATCCAGATGAGAATAATAGCAATAGTTAACTAGTATG-------------------ACCTTTCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63895995 232 - 106955855 CATTTATTCCTTTGAGATGTCCCTGTCAACTACCATGATAACCCACCAGTTGGGCTTCAGACCTTCA-TCTCTCTTTA-CCCCACTTTAAGGCAGATCAGCTACATTTTGAACAACCTATGACAACTCCTTGTTGAAGACCACATTGAGTCAGCTTGG-------------------------------------TCTGAGAAAAAGTACGTTTAAATTAGACTTGGATCCAGATGAGAATAATAGCAATAGTT-ACTAGTATG-------------------ACCTTTCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208103 227 + 53671032 CATTTATTCCTTTGAGATGTCCCTGTCAACTACCATGATAACCCACCAGTTGGGCTTCAGACCTTCA-TCTCTCTTTACCCCCACTTTAAGGCAGATCAGCTGTGTTTTGAAGAACCTATGACAACTGCTTGTTGAAGACCACATTGAGCCAGCTTGG-------------------------------------TTTGAGAAAAAGTATGTTTAAATTAGACTTGGATCCAGAT------AATAGCAATAGTT-ACTAGTATG-------------------ACCTTTCA i rheMac8.chr19 I 10 C 0 s macFas5.chr19 34661821 227 + 59248254 CATTTATTCCTTTGAGATGTCCCTGTCAACTACCATGATAACCCACCAGTTGGGCTTCAGACCTTCA-TCTCTCTTCACCCCCACTTTAAGGCAGATCAGCTGTGTTTTGAAGAACCTATGACAACTGCTTGTTGAAGACCACATTGAGCCAGCTTGG-------------------------------------TTTGAGAAAAAGTATGTTTAAATTAGACTTGGATCCAGAT------AATAGCAATAGTT-ACTAGTATG-------------------ACCTTTCA i macFas5.chr19 I 10 C 0 s macNem1.NW_012011689v1 4528343 227 - 13342542 CATTTATTCCTTTGAGATGTCCCTGTCAACTACCATGATAACCCACCAGTTGGGCTTCAGACCTTCA-TCTCTCTTTACCCCCACTTTAAGGCAGATCAGCTGTGTTTTGAAGAACCTATGACAACTGCTTGTTGAAGACCACATTGAGCCAGCTTGG-------------------------------------TTTGAGAAAAAGTATGTTTAAATTAGACTTGGATCCAGAT------AATAGCAATAGTT-ACTAGTATG-------------------ACCTTTCA i macNem1.NW_012011689v1 I 10 C 0 s cerAty1.NW_012005268v1 5458571 227 + 7714307 CATTTATTCCTTTGAGATGTCCCTGTCAACTACCATGATAACCCACCAGTTGGGCTTCAGACTTTCA-TCTCTCTTTACCCCCACTTTAAGGCAGATCAGCTGTGTTTTGAAGAACCTATGACAACTGCTTGTTGAAGACCACATTGGGCCAGCTTGG-------------------------------------TTTGAGAAAAAGTATGTTTAAATTAGACTTGGATCCAGAT------AATAGCAATAGTT-ACTAGTATG-------------------ACCTTTCA i cerAty1.NW_012005268v1 I 10 C 0 s chlSab2.chr6 29258405 227 + 50890351 CATTTATTCCTTTGAGATGTCCCTGTCAACTACCATGATAACCCACCAGTTGGGCTTCAGACCTTCA-TCTCTCTTTGCCCCCACTTTAAGGCAGATCAGCTGTGTTTTGAAGAACCTATGACAACTGCTTGTTGAAGACCACATTGAGCCAGCTTGG-------------------------------------TTTGAGAAAAAGTATGTTTAAATTAGGCTTGGATCCAGAT------AATAGCAATAGTT-ACTAGTATG-------------------ACCTTTCA i chlSab2.chr6 I 10 C 0 s manLeu1.NW_012102454v1 889713 227 - 2385121 CATTTATTCCTTTGAGATGTCCCTGTCAACTACCATGATAACCCACCAGTTGGGCTTCAGACCTTCA-TCTCTCTTTACCCCCACTTTAAGGCAGATCAGCTGTGTTTTGAAGAACCTATGACAACTGCTTGTTGAAGACCACCTTGAGCCAGCTTGG-------------------------------------TTTGAGAAAAAGTATGTTTAAATTAGACTTGGATCCAGAT------AATAGCAATAGTT-ACTAGTATG-------------------ACCTTTCA i manLeu1.NW_012102454v1 I 10 C 0 s colAng1.NW_012111697v1 2328997 233 + 4274983 CATTTATTCCTTTGAGATGTCCCTGTCAACTACCGTGATAACCCACCAGTTGGGCTTCAGATCTTCA-TCTGTCTTTACCCCCACTTTAAGGCAGATCAGCTGTATTTTGAAGAACCTATGACAACTGCTTGTTGAAGACCACATTGAGTCAGCTTGG-------------------------------------TTTGAGAAAAAGTATGTTTAAATTAGACTTGGATCCAGATGAGAACAATAGCAATAGTT-ACTAGTATG-------------------ACCTTTCA i colAng1.NW_012111697v1 I 10 C 0 s calJac3.chr22 28560353 217 + 49145316 CATTTATTCCTTTGAGATATCCCTGTCAAATACTATGAGAACCCATCAGTCAAGCTTCAAACCTTCG-TCTCTCTTTA-CCCCACTTTAAGGCAGATCAGCTACATTTTGAAGAACCTA---------------GAAGACCACATTGAGTCAGCTTGT-------------------------------------TTTGATAAAAAGTACGTTTAAATTAGACTTTGATCCAAGTGAGAATAATAGCAATAGTT-ACTAGTATG-------------------ACGTTTCA i calJac3.chr22 I 9 C 0 s saiBol1.JH378197 5404865 217 + 8899380 CATTTATTCCTTTGAGATGTCTCTGTCAAATACTATGATAACCCATCAGTCAAGCTTCAGACCTTCA-TCTCTCTTTA-CCCCACTTCAAGGCAGATCAGCTACATTTTGAAGAACCTA---------------GAAGACCACATTGAGTCAGCTTGT-------------------------------------CTTGATAAAAAGTATGTTTAAATTAGATTTTGATCCAAATGAGAATAATAGCAATAGTT-ACTAGTATG-------------------ACCTTTCA i saiBol1.JH378197 I 9 C 0 s aotNan1.NW_018505377v1 361457 217 - 4471408 CGTTTATTCCTTTGAGATGTCCCTGTCAAATACTATGATAACCCATCAGTCAAGCTTCAGACCTTCA-TCTCTCTTTA-CCCCCCTTTAAGGCAGATCAGCTACATTTTGAAGAACCTA---------------GAAGACCACATTGAGTCAGCTTGT-------------------------------------TTTGATAAAAAGTACGTTTAAATTAGACTTTGATCCAAATGAGAATAATAGCAATAGTT-ACTAGTATG-------------------ACCTTTCA i aotNan1.NW_018505377v1 I 9 C 0 s canFam3.chr1 4611997 286 - 122678785 CATTTGTTCCCATGCAGTGTCCCTGCCCACTACCATAATAACCCACTGACTGGTCTGCAGACGTTC--CCTCTCTTTA-CCTCACTT-GAGGCATGTCAGCTACCTGTTGAAGAGCCTATGACAACTCCTTGTTGAAGACCACATTGAGTCCACTGGGCTTGAGAAAAAGTACAAAAGTACATTTTTTTTTTTTTTTTGAGAAAAAGTACATTTAAATTAAACTTGAATCCTGATGAGAATTCTAGTGATTGTT-GCTAGTATGACAACAGTTGAATCGTTAAACCTTTCA i canFam3.chr1 I 23 C 0 s dasNov3.JH563638 335780 226 + 643850 CATTCACTTCATTGAAATATCCCTACCAAATACCACAGTAACCCACTGATTGGTCTTCAGACCTTTAGTCTGTCTTTA-GACTACTTTGAA----------------TGCAAAAATCTATGGCAACTCCTTGTTGAAGACCACACTGAG----CTTAA-------------------------------------TTTGAGAAAGATTA-----AAATTAGACTTGGAGTCAGACGAGAATTATA-TAATCATT-GCTAgtaggacctcagtcaagtgactaaacctttta i dasNov3.JH563638 I 53 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e otoGar3.GL873654 5477262 1001 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e cebCap1.NW_016107633v1 1610218 986 - 2680843 I a score=1291192.000000 s hg38.chr19_GL383574v1_alt 71570 116 + 155864 GACCCTTGGTTTTGACATTTGTGAATAAAGAGTTGCACCATTTATTCTGAAATAACACCTTTT-AAAGATCATTAAACTTTCAGAGTTGGAAAACATCTGAGAGGTCTGA---CCTGGTT s panTro5.chr19 36140148 116 + 61309027 GACCCTTGGTTTTGACATTTGTGAATAAAGAGTTGCACCATTTATTCTGAAATAACACCTTTT-AAAGATCATTAAACTTTCAGAGTTGGAAAACAACTGAGAGGTCTGA---CCTGGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39886370 116 + 64411610 GACCCTTGGTTTTGACATTTGTGAATAAAGAGTTGCACCATTTATTCTGAAATAACACCTttt-aaagatcattaaactttcagagttggaaaacatctgagaggtcTGA---CCTGGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6303962 116 - 8369475 GACCCTTGGTTTTGACATTTGTGAATAAAGAGTTGCACCATTTATTCTGAAATAACACCTttt-aaagatcattaaactttcagagttggaaaacatctgagaggtctga---cctggtt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63896227 115 - 106955855 GACCCTTAGTTTTGACATTTGTGGATAAAGAGTTGTACCATTTATTCTGAAAT-ACACCTttt-aaagatcattaaactttcagagttggaaaacatctgagaggtcTGA---CCTGGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208330 115 + 53671032 GACCCTTAGTTTCGACATTTGAGGATAAAGAGTTGCACCATTTATTCTGAAAT-ACACCTttt-aaagatcattaaactttcagagttggaaaacatctgagaggtctga---cctggtt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34662048 115 + 59248254 GACCCTTAGTTTCGACATTTGAGGATAAAGAGTTGCACCATTTATTCTGAAAT-ACACCTttt-aaagatcattaaactttcagagttggaaaacatctgagaggtcTGA---CCTGGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4528570 115 - 13342542 GACCCTTAGTTTCGACATTTGAGGATAAAGAGTTGCACCATTTATTCTGAAAT-ACACCTTTT-Aaagatcattaaactttcagagttggaaaacatctgagaggtctga---cctggtt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5458798 115 + 7714307 GACCCTTAGTTTCGACATTTGAGGATAAAGAGTTGCACCATTTATTCTGAAAT-ACACCTTTT-Aaagatcattaaactttcagagttggaaaacatctgagaggtctga---cctggtt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29258632 115 + 50890351 GACCCTTAGTTTCGACATTTGAGGATAAAGAGTTGCACCATTTATTCTGAAAT-ACGCCTttt-aaagatcattaaactttcagagttggaaaacatctgagaggtcTGA---CCTGGTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 889940 115 - 2385121 GACCCTTAGTTTCGACATTTGAGGATAAAGAGTTGCACCATTTATTCTGAAAT-ACACCTTTT-Aaagatcattaaactttcagagttggaaaacatctgagaggtctga---cctggtt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2329230 115 + 4274983 GACCCTTAGTTTCGACATTTGAGGATAAAGAGTTGCACCATTTATTCTGAAAT-ACACCTTTT-AAAGATCATTAAACTTTCAGAGTTGGAAAACATGTGAGAGGTCTGA---CCTGGTT i colAng1.NW_012111697v1 C 0 I 307 s calJac3.chr22 28560570 114 + 49145316 GACCCTTAGTTTTGACATTTGTGGATAAAGAGTTGCACCACTTATTCTAAAAT-AGACCTTTT-AAAGATCATTAAACTTTCAGAGTTAGAAAA-ATCTGAGAGGTCTGA---CCAGGTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5405082 114 + 8899380 GACACTTAGTTTTGACATTCGTGGATAAAGAGTTGCACCGCTTATTCTAAAAT-AGACCTTTT-AAAGGTCATTAAACTTTCAAAGTTGGAAAA-ATCTGAGAGGTCTGA---CCAGGTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1611204 114 - 2680843 GACTCTTAGTTTTGACATTTGTGGATAAAGAGTTGCACCACTTATTCTAAAAT-AGACCTTTT-AAAGatcattaaactttcagagttggaaaa-atctgagaggtctga---ccaggtt i cebCap1.NW_016107633v1 I 986 C 0 s aotNan1.NW_018505377v1 361674 114 - 4471408 GACCCTCAGTTTTGACATTTGTGGATAAAGAGTCGCACCACTTATTCTAAAAT-AGACCTTTT-AAAGATCGTTAAACTTTCAGAGTTGGAAAA-ATCTGAGAGGTCTGA---CCAGGTT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4612283 106 - 122678785 GGCCCTCAGTTTTTACATTTTTGG--AAAGAGTTATACT-TTTATC----AAT-A----TTTT-AAAGATCACTAAAATCTCA-AGTTGTAAAGCATCTGAGAGGTCTGAGCTCCTGGCC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 336006 117 + 643850 aaccctcaatttttacatttttggaaagggatTTCCATAGTTTTATCTCAAAT-ACACCTTTTAAAAGATTTCTAAACTCTT--AGTTGGAAGACATTTGAGAGATCCAACTTCCTGGCC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e otoGar3.GL873654 5477262 1001 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I a score=1019748.000000 s hg38.chr19_GL383574v1_alt 71686 85 + 155864 AAAACATAAACCTCTTC-TGCAGTATCTCT--TATAGGGGCTGGGAGCTTACTCTTCCCAAGGGCATCCATCCCACCCCAGGGATGTT s panTro5.chr19 36140264 85 + 61309027 AAAACATAAACCTCTTC-TGCAGTATCTCT--TATAGGGGCTGGGAGCTTACTCTTCCCAAGGGCATCCATCCCACCCCAGGGATGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39886486 85 + 64411610 AAAACATAaacctcttc-tgcagtatctct--tataggggctgggagcttactcttcccaagggcatccatcccaccccagggatgtt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304078 85 - 8369475 aaaacataaacctcttc-tgcagtatctct--tataggGGCTGGGAGCTTACTCTTCCCAAGGGCATCCATCCCGCCCCAGGGATGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63896342 83 - 106955855 AAAAC--Aaacctcttc-tccagtatctct--tataggggctgggagcttactcttcccaagggcatccatcccaccccagggatgtt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208445 85 + 53671032 aaaacataaacctcttc-tgcagtatctct--tatagggggtaggagcttactcttcccaagggcatccatcccaccccagggatgtt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34662163 85 + 59248254 AAAACATAaacctcttc-tgcagtatctct--tatagggggtaggagcttactcttcccaagggcatccatcccaccccagggatgtt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4528685 85 - 13342542 aaaacataaacctcttc-tgcagtatctct--tatagggggtaggagcttactcttcccaagggcatccatcccaccccagggatgtt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5458913 85 + 7714307 aaaacataaacctcttc-tgcagtatctct--tatagggggtAGGAGCTTACTCTTTCCAAGGGCATCCATCCCACCCCAGGGATGTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29258747 85 + 50890351 AAAACATAaacctcttc-tgcagtatctct--tatagggggtaggagcttactcttcccaagggcatccatcccaccccagggatgtt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 890055 85 - 2385121 aaaacataaacctcttc-tgcagtatctct--tatagggggtAGGAGCTTACTCTTCCCAAGGGCATCCATCCCACCCCAGGGATGTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2329652 85 + 4274983 aaaaCATAaacctcttc-tgcagtatctct--tatagagggtaggagcttactcttcccaagggcatccatcccacccgagggatatt i colAng1.NW_012111697v1 I 307 C 0 s calJac3.chr22 28560684 85 + 49145316 AAAGCATAaacctcttc-tgcagtatctct--tatagaggctgggagcttactcttcccaagggcatctatcctaccctaggaatgtt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5405196 85 + 8899380 AAAGCATAaacctcttc-tgcagtatctct--tacagaggctgggaccttactcttcccaagggcatccgtcccactctaggaatgtt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1611318 87 - 2680843 aaagcataaacctcttc-tgcagtatctcttatatataggctgggagcttactcttcccaagggcatccatcccaccctaggaatgtt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 361788 85 - 4471408 AAAGCATAaacctcttc-tgcagtacctct--tatagaggctgggagcttactcttcccaagggcatccatcccaccctaggaatgtt i aotNan1.NW_018505377v1 C 0 I 202 s canFam3.chr1 4612389 81 - 122678785 AAGCCGTGAGTC----C-TGAAGTATccct--taatggcactggcagcttacttttcctaagagcatccatcccaccccagggatggt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 336123 86 + 643850 AAATCATAAACCTCATCTTGAAACATCCCT--TACAAGGGCTAGGAGCTTAATCTTCCCAAGGACATCCAGCCCACTCTAGGAATGCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e otoGar3.GL873654 5477262 1001 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I a score=84435.000000 s hg38.chr19_GL383574v1_alt 71771 10 + 155864 CTAACTGTTA s panTro5.chr19 36140349 10 + 61309027 CTAACTGTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39886571 10 + 64411610 ctaactgtta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304163 6 - 8369475 ----CTGTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63896425 10 - 106955855 ctaattgtta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208530 10 + 53671032 ctaattgtta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34662248 10 + 59248254 ctaattgtta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4528770 10 - 13342542 ctaattgtta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5458998 10 + 7714307 CTAATTGTTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29258832 10 + 50890351 ctaattgtta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 890140 10 - 2385121 CTAATTGTTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2329737 10 + 4274983 ctaattgtta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28560769 10 + 49145316 ataattgtta i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5405281 10 + 8899380 ataattgtta i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1611405 10 - 2680843 ataattgtta i cebCap1.NW_016107633v1 C 0 I 189 s canFam3.chr1 4612470 10 - 122678785 ctaattagta i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 336209 7 + 643850 CTAATTA--- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e otoGar3.GL873654 5477262 1001 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e aotNan1.NW_018505377v1 361873 202 - 4471408 I a score=47259.000000 s hg38.chr19_GL383574v1_alt 71781 6 + 155864 CAATCT s panTro5.chr19 36140359 6 + 61309027 CAATCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39886581 6 + 64411610 caaTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304169 6 - 8369475 CAATCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63896435 6 - 106955855 CAGTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208540 6 + 53671032 caaTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34662258 6 + 59248254 caaTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4528780 6 - 13342542 caaTCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5459008 6 + 7714307 CAATCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29258842 6 + 50890351 caaTCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 890150 6 - 2385121 CAATCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2329747 6 + 4274983 caaTCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28560779 6 + 49145316 agatct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5405291 6 + 8899380 agatct i saiBol1.JH378197 C 0 I 479 s canFam3.chr1 4612480 6 - 122678785 ggattt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 336216 6 + 643850 AGATCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e otoGar3.GL873654 5477262 1001 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e aotNan1.NW_018505377v1 361873 202 - 4471408 I e cebCap1.NW_016107633v1 1611415 189 - 2680843 I a score=15364.000000 s hg38.chr19_GL383574v1_alt 71787 2 + 155864 CA s panTro5.chr19 36140365 2 + 61309027 CA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39886587 2 + 64411610 CA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304175 2 - 8369475 CA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63896441 2 - 106955855 Cg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208546 2 + 53671032 Cg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34662264 2 + 59248254 Cg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4528786 2 - 13342542 Cg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5459014 2 + 7714307 Cg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29258848 2 + 50890351 Cg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 890156 2 - 2385121 Cg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2329753 2 + 4274983 Cg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28560785 2 + 49145316 ca i calJac3.chr22 C 0 I 184 s saiBol1.JH378197 5405776 2 + 8899380 CA i saiBol1.JH378197 I 479 C 0 s canFam3.chr1 4612486 2 - 122678785 ca i canFam3.chr1 C 0 I 208 s dasNov3.JH563638 336222 2 + 643850 CA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e otoGar3.GL873654 5477262 1001 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e aotNan1.NW_018505377v1 361873 202 - 4471408 I e cebCap1.NW_016107633v1 1611415 189 - 2680843 I a score=775989.000000 s hg38.chr19_GL383574v1_alt 71789 80 + 155864 gctgggcgtg------gtggctcacacctataatcccagcactttgggaggctgaggtgggcggatcacct--gaggtcaggagttcg s panTro5.chr19 36140367 80 + 61309027 gctgggcgtg------gtggctcacacctataatcccagcactttgggaggccgaggtgggcggatcacct--gaggtcaggagttcg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39886589 80 + 64411610 gctgggcgtg------gtggctcacacctataatcccagcactttgggaggccgaggtgggcggatcacct--gaggtcaggagttcg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304177 80 - 8369475 gctgggcgtg------gtggctcacacctataatcccagcactttgggaggccgaggtgggcggatcacct--gaggtcaggagttcg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63896443 80 - 106955855 gcttgacgtg------gtggctcacacctataatcccagcactttgggaggccgaggtgggtggatcacct--gagatcaggagtttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208548 80 + 53671032 gctgggcatg------gtggctcacgcctgtaattccagcactttgggaggccaaggtgggcagatcacct--gaggtcaggagttcg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34662266 80 + 59248254 gctgggcatg------gtggctcacgcctgtaattccagcactttgggaggccaaggtgggcagatcacct--gaggtcaggagttcg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4528788 80 - 13342542 gctgggcatg------gtggctcacgcctgtaattccagcactttgggaggccaaggtgggcagatcacct--gaggtcaggagttcg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5459016 80 + 7714307 gctgggcatg------gtggctcacgcctgtaattccagcactttgagaggccaaggtgggcagatcacct--gaggtcaggagttcg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29258850 80 + 50890351 gctgggcatg------gtggctcatgcctataattccagcactttgggaggccaaggtgggcagatcacct--gaggtcaggagttcg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 890158 80 - 2385121 gctgggcatg------gtggctcacgcctgtaattccagcactttgggaggccaaggtgggcagatcacct--gaggtcaggagtttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2329755 80 + 4274983 gctgggcatg------gtggctcacgcctgtaattctagcactttgggaggccaaggtgggcagatcacct--gaggtcaggagttcg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28560971 80 + 49145316 gctgggtgca------gtggctcacgcctgtaatcccaacactttgggaggctgagacgaacagatcacct--gaggtcaggagtttg i calJac3.chr22 I 184 C 0 s saiBol1.JH378197 5405778 78 + 8899380 gccaggcgcg------gtggctcaagcctgtaatcccagcactttgggagaccaaggtgggtggatcac----gaggtcaagagatca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1611604 80 - 2680843 gctgggtgcg------gtggctcacgcctgtaatcacagcactttgggaggccgagacgggcagatcacct--gaggtcaggagtttg i cebCap1.NW_016107633v1 I 189 C 0 s aotNan1.NW_018505377v1 362075 80 - 4471408 gctgggtgcg------gtggctcacgcctgtaatcccaacactttgggaggccgagacaggcagacctcct--gaagtcaggagattg i aotNan1.NW_018505377v1 I 202 C 0 s dasNov3.JH563638 336224 66 + 643850 -CAGGgggaagcagatgtggctca-----atggttcgagcttct----------------gcctaccatgtaggaggtccagggttcg i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e otoGar3.GL873654 5477262 1001 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e canFam3.chr1 4612488 208 - 122678785 I a score=281222.000000 s hg38.chr19_GL383574v1_alt 71869 24 + 155864 -------agaccagcctggctaacatggtga s panTro5.chr19 36140447 24 + 61309027 -------agaccagcctggctaacgtggtga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39886669 24 + 64411610 -------agaccagcctggctaacatggtga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304257 24 - 8369475 -------agaccagcctggctaacatggtga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63896523 24 - 106955855 -------agaccagcctggctaacatggtga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208628 24 + 53671032 -------agaccagcctggctaacatggtga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34662346 24 + 59248254 -------agaccagcctggctaacatggtga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4528868 24 - 13342542 -------agaccagcctggctaacatggtga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5459096 24 + 7714307 -------agaccagcctggctaacatggtga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29258930 24 + 50890351 -------agaccagcctggctaacatggtga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 890238 24 - 2385121 -------agaccagcctggctaacatggtga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2329835 24 + 4274983 -------agaccagcctggctaacatggtga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561051 24 + 49145316 -------agaccagcctggctaacatggtga i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5405856 24 + 8899380 -------agaccatcctggtcaacatggtga i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1611684 24 - 2680843 -------agaccagcctggcaaacatggtga i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 362155 24 - 4471408 -------agaccagcctggctaacatggtga i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5478263 21 + 5549422 -------agaccag---agctagcgggttca i otoGar3.GL873654 I 1001 C 0 s dasNov3.JH563638 336290 31 + 643850 atacccaagggcctcctggcccgtgtggtga i dasNov3.JH563638 C 0 I 1176 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e mm10.chr7 111091519 1541 - 145441459 I e canFam3.chr1 4612488 208 - 122678785 I a score=1773094.000000 s hg38.chr19_GL383574v1_alt 71893 192 + 155864 aac-cccgtc----tctaccaaa----a--acataaa--------aaaaattagccgggcgtggtggcacacacctgtaatccc----agctactcgggaggctgaggcaggagaatcat-tgaacctgggaggcagaggttgcagtgagccgagatcacgccactgtactccagcctgggcgacagagcaagactccgtctc------aaaaaaaggaaaa s panTro5.chr19 36140471 192 + 61309027 aac-cccgtc----tctaccaaa----a--atataaa--------aaaaattagccgggcgtggtggcacacgcctgtaatccc----agctactcgggaggctgaggcaggagaatcgt-tgaacctgggaggcagaggttgcagtgagccgagatcacgccactgcactccagcctgggcgacagagcaagactccgtctc------aaaaaaaggaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39886693 190 + 64411610 aac-cccgtc----tctaccaaa----a--atat-aa--------aaaaattagccgggcgtggtggcacacgcctgtaatccc----agctactcgggaggctgaggcaggagaatcgt-tgaacctgggaggcagaggttgcagtgagccgagatcacgccactgcactccagcctgggcgacagagcaagactccgtctc------aaaaaaagg-aaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304281 191 - 8369475 aac-cccgtc----tctacc-aa----a--atataaa--------aaaaattagccgggcgtggtggcacacgcctgtaatccc----agctactcgggaggctgaggcaggagaatcgt-tgaacctgggaggcagaggttgcagtgagccaagatcacgccactgcactccagcctgggcgacagagcaagactctgtctc------aaaaaaaggaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63896547 192 - 106955855 aac-cccgtc----tctaccaaa----a--atataaa--------gaaaattagccgggcatggtggcacgtgcttgtaatacc----agctactcaggagactgaggcaggagaatcgt-tgaacctgggaggcagaggtagcagtgagctgagatcacgccactgcactccagcctgggcgacagagcaagactccgtctc------aaaaaaaggaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208652 192 + 53671032 aac-cccgcc----tctaccaaa----a--atattaa--------aaaaattagccaggcgtggtggcacacgcctgtaatccc----agctactcaggaggctgaggcaggagaatcac-tgaatctgggaggcagaggttgcagtgagccgaggtcacgccactgcactccagcctgggcagcagagcaaggctccatctc------aaaaaaaagaaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34662370 192 + 59248254 aac-cccgcc----tctaccaaa----a--atataaa--------aaaaattagccaggcgtggtggcacacgcctgtagtccc----agctactcaggaggctgaggcaggagaatcgc-tgaatctgggaggcagaggttgcagtgagccgaggtcacgccactgcactccagcctgggcagcagagcaaggctccatctc------aaaaaaaagaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4528892 192 - 13342542 aac-cccgcc----tctaccaaa----a--atataaa--------aaaaattagccaggcgtggtggcacacgcctgtagtccc----agctactcaggaggctgaggcaggagaatcgc-tgaatctgggaggcagaggttgcagtgagccgaggtcacgccactgcactccagcctgggcagcagagcaaggctccatctc------aaaaaaaagaaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5459120 192 + 7714307 aac-cccgcc----tctaccaaa----a--atataaa--------aaaaattagccaggcgtggtggcacacgcctgtagtccc----agctactcaggaggctgaggcaggagaatcgg-tgaatctgggaggcagaggttgcagtgagccgaggtcacgccactgcactccagcctgggcaacagagcaaggctccatctc------aaaaaaaagaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29258954 192 + 50890351 aac-cccgcc----tctaccaaa----a--atatttt--------aaaaattagccaggcgtggtggcacacgcctgtagtccc----agctactcaggaggctgaggcaggagaatcgc-tgaatctgggaggcagaggttgcagtgagccgaggtcacgccactgcactccagcctgggcaacagagcaaggctccatctc------aaaaaaaagaaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 890262 192 - 2385121 aac-cccgcc----tctaccaaa----a--atataaa--------aaaaattagccaggcgtggtggcacacgcctgtagtccc----agctactcaggaggctgaggcaggagaatcgc-tgaatctgggaggcagaggttgcagtgagccgaggtcacgccactgcactccagcctgggcaacagagcaaggctccatctc------aaaaaaaagaaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2329859 195 + 4274983 aac-cccatc----tctaccaaa----a--atattaa--------aaaaattagccaggcgtggtggcacacgcctatagtcgc----agctactcaggaggctgaggcaggagaatcgt-tgaacctgggaggcagaggtttcagtgagccgagatcatgccactgcactccagcctgggaaacagagcaaggctccgtctc---aataaaacaaagaaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561075 195 + 49145316 aactcccatc----tctactaaa----a--gta------------aataattagccaggcatggtagtgcacacctataatccc----agctactccagaggctggggcaggagaatcgcttgaacccaggactcagaggttgcagtgagctgaggtcacgccactgtactccaccctgggtgacagagcaagactccgtctc-aaaaaagaaaaagaaaaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5405880 147 + 8899380 aac-cccgtc----tctactaaa----aacaca------------aaaaattagctgggcatggtggtgcgtgcttgtaatccc----agctactccggaggctgaggcaggagaattgcctgaacccaggaggcggaggttgcggtgagccgagatcgcgccattgcactc-------------------------------------------------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1611708 187 - 2680843 aac-tccatc----tccactaaa----a--ata------------aataattagccaggcatggtagtgcacacttataatccc----agctactccggaggctggggcaggagaatcac-tgaacccaggactcagaggttgcagtgagctgagatcacaccactgtactccaccatgggcgacagagcaagactccgtctt-------gaaaaagaaaaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 362179 195 - 4471408 aac-tccatc----tctactaaa----a--ata------------aataattagccaggcatggtagtgcacacctataatccc----agctactccggaggctggggcaggagaatcgcttgaacccaggactcagaggttgcagtgagctgagatcacgccactgtactccaccctgggcaacagagcaagactccgtctcaaaaaaagaaaaagaaaat i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5478284 193 + 5549422 aat-ccagcccaggcctgccaaacaaca--atgacaactacaaccaaaaaatagccggatgttgtgacaggtgcctatagtcccagttagttactcaggaagctgaggcaagagaatcgg-----------------aggttgctgtgagctgtgat---gccattgcactctaccaagggcaataaagtgagactttgtctc------aaaaaaaaaaaaa i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e dasNov3.JH563638 336321 1176 + 643850 I e mm10.chr7 111091519 1541 - 145441459 I e canFam3.chr1 4612488 208 - 122678785 I a score=477333.000000 s hg38.chr19_GL383574v1_alt 72085 56 + 155864 aa--------------------------------------------------------------------caaaCCT-----TCCATGCAGTAACTGTGTGTGC--TCCATGTGGTTACTAATACAAACAT s panTro5.chr19 36140663 56 + 61309027 aa--------------------------------------------------------------------caaaCCT-----TCCATGCAGTAACTGTGTGTGC--TCCATGTGTTTACTAATACAAACAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39886883 56 + 64411610 aa--------------------------------------------------------------------caaaCCT-----TCCATGCAGTAACTGTGTGTGC--TCCATGTGTTTACTAATACAAACAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304472 56 - 8369475 aa--------------------------------------------------------------------caaaCCT-----TCCATGCAGTAACTGTGTGTGC--TCCATGTGCTTACTAATACAAACAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63896739 54 - 106955855 aC--------------------------------------------------------------------CAAACCT-----TCCATGCAGTAAC--TGTGTGC--TCCATGTGCTTACTAGTACAAACAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208844 56 + 53671032 aa--------------------------------------------------------------------caaaCCT-----TCCATGTAGTAACTGTGTGTGC--TCCATGTACTTACTAATACAAACGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34662562 56 + 59248254 aa--------------------------------------------------------------------caaaCCT-----TCCATGTAGTAACTGTGTGTGC--TCCATGTACTTACTAATACAAACGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4529084 56 - 13342542 aa--------------------------------------------------------------------caaaCCT-----TCCATGTAGTAACTGTGTGTGC--TCCATGTACTTACTAATACAAACGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5459312 55 + 7714307 aa--------------------------------------------------------------------caaaCCT-----TCCATGTAGTAACTGTGTGTGC--TCCATGTGCTTACTAATACAAAC-T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29259146 56 + 50890351 aa--------------------------------------------------------------------caaaCCT-----TCCATGTAGTAACTGCGTGTGC--TCCATGTGCTTACTAACACAAACAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 890454 56 - 2385121 aa--------------------------------------------------------------------caaaCCT-----TCCATGTAGTAACTGTGTGTGC--TCCGTGTGCTTACTAATACAAACGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2330054 56 + 4274983 aa--------------------------------------------------------------------caaaCCT-----TCCATGCAGTAACTGTGTGTGC--TCCATGTGCTTACTAATACAAAGGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561270 56 + 49145316 aa--------------------------------------------------------------------caaaCCT-----TTCACTCAGTAACTCTGTGTGC--TACACATGCTTAATAATACAAACAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5406027 41 + 8899380 ----------------------------------------------------------------------------------------cagcAACTCTGTGTGC--TCCATGTGCTTACTAATACAAACAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1611895 56 - 2680843 aa--------------------------------------------------------------------caaaCCT-----TTCATTCAGTAACTCTGTGTGC--TCCATGTGCTTACTAATACAAACAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 362374 56 - 4471408 aa--------------------------------------------------------------------caaaCCT-----TTCATTCAGTAACTCTGTGTGT--TCCACGTGCTTACTAATACAAACAT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5478477 129 + 5549422 agagaaagaaacagagtcttattctgttgccctgggtagagcgctgtggcgtcatagaccacagcaacctcaaacttgtgggttcaagcagtcctcttgcctcc--gcctcccagtagctggtactaccat i otoGar3.GL873654 C 0 I 168 s dasNov3.JH563638 337497 57 + 643850 AG--------------------------------------------------------------------CAAGCCT-----T-CATTGAGTACTTGTGTGCACAGTACTTGAACTTATTAATACCAGCAT i dasNov3.JH563638 I 1176 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e mm10.chr7 111091519 1541 - 145441459 I e canFam3.chr1 4612488 208 - 122678785 I a score=244540.000000 s hg38.chr19_GL383574v1_alt 72141 27 + 155864 --TTTTTTGAC-ACCATGTCACACTGTTTA s panTro5.chr19 36140719 27 + 61309027 --TTTTTTGAC-ACCATGTCACACCGTTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39886939 27 + 64411610 --TTTTTTGAC-ACCATGTCACACCGTTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304528 28 - 8369475 --ttttttgacaaccatgtcacgctgttta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63896793 28 - 106955855 --ttttttgacaaccatgtcacgctgttta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208900 27 + 53671032 --TGTTTTGAC-ATCATGTCACACTGTTTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34662618 27 + 59248254 --TGTTTTGAC-ATCATGTCACACTGTTTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4529140 27 - 13342542 --TTTTTTGAC-ATCATGTCACACTGTTTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5459367 27 + 7714307 --TTTTTTGAC-ATCATGTCACACTGTTTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29259202 27 + 50890351 --TTTTCTGAC-ATCATGTCACACTGTTTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 890510 27 - 2385121 --TTTTTTGAC-ATCATGTCACACTGTTTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2330110 27 + 4274983 --TTTTTTGAC-ACCATGTCACACTGTTTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561326 27 + 49145316 --TTTTTTGAA-GTCATGTCACACTATTTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5406068 27 + 8899380 --TTTTTTAAA-GCCATGTCACACTATTTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1611951 23 - 2680843 --TTTTTTGAA-GCCATGTCACAC----TA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 362430 27 - 4471408 --TTTTTTGAA-GCCATGTCACACTATTTA i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 337554 29 + 643850 TCTTTTTTGAC-CGTATAATTCACTCCTTA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3958871 608 - 30143674 I e otoGar3.GL873654 5478606 168 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e canFam3.chr1 4612488 208 - 122678785 I a score=409928.000000 s hg38.chr19_GL383574v1_alt 72168 35 + 155864 TCATTTTGAGCCTTT-TG-TAAAACTCGTATCACATA s panTro5.chr19 36140746 35 + 61309027 TCATTTTGAGCCTTT-TG-TAAAACTCCTATCACATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39886966 35 + 64411610 TCATTTTGAGCCTTT-TG-TAAAACTCCTatcacata i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304556 35 - 8369475 tcattttgagccttt-tg-taaaactcctatcacgta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63896821 35 - 106955855 tcattttgagccttt-tg-taaaactcctatcacgta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208927 35 + 53671032 TCATTTTGAGCCTTT-TG-TAAAACTCCTATCACATA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34662645 35 + 59248254 TCATTTTGAGCCTTT-TG-TAAAACTCCTATCACATA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4529167 35 - 13342542 TCATTTTGAGCCTTT-TG-TAAAACTCCTATCACATA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5459394 35 + 7714307 TCATTTTGAGCCTTT-TG-TAAAACTCCTATCACATA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29259229 35 + 50890351 TCATTTTGAGCCTTT-TG-TAAAACTCCTATCACATA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 890537 35 - 2385121 TCATTTTGAGCCTTT-TG-TAAAACTCCTATCACATA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2330137 35 + 4274983 TCATTTTGAGCCTTT-TG-TAAAACTCCTGTCACATG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561353 34 + 49145316 TCATCTTGAGCCTTT-GA-TAAAACTATCA-CACATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5406095 35 + 8899380 TCATTTTGAGCCTTT-TG-TAAAACTTCTATCATGTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1611974 35 - 2680843 TCATTTTGAGCCCTT-TG-TAAAACTCCTATCACGTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 362457 35 - 4471408 TCATTTTGAGCCTTT-TG-TAAAACTCCTATCACATA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3959479 36 - 30143674 TCATTTTGAGCCTTT-TATTAAAACTCCCATCACATA i micMur3.chr22 I 608 C 0 s dasNov3.JH563638 337583 34 + 643850 --TTTTTGAGCCTTTACT-TTATGTTTCTGTCACATA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e otoGar3.GL873654 5478606 168 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e canFam3.chr1 4612488 208 - 122678785 I a score=107030.000000 s hg38.chr19_GL383574v1_alt 72203 8 + 155864 TATTGCAG s panTro5.chr19 36140781 8 + 61309027 TATTGCAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887001 8 + 64411610 tattgcag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304591 8 - 8369475 tattgcag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63896856 8 - 106955855 tattgcAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208962 8 + 53671032 TATTGCAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34662680 8 + 59248254 TATTGCAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4529202 8 - 13342542 TATTGCAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5459429 8 + 7714307 TATTGCAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29259264 8 + 50890351 TATTGCAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 890572 8 - 2385121 TATTGCAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2330172 8 + 4274983 TATTGCAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561387 8 + 49145316 TATTACAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5406130 8 + 8899380 TATTACAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1612009 8 - 2680843 TATTACAG i cebCap1.NW_016107633v1 C 0 I 308 s aotNan1.NW_018505377v1 362492 8 - 4471408 TATTACAG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3959515 8 - 30143674 TGTTGCAG i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5478774 8 + 5549422 TAATGCAA i otoGar3.GL873654 I 168 C 0 s dasNov3.JH563638 337617 8 + 643850 TACGGCAG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e mm10.chr7 111091519 1541 - 145441459 I e canFam3.chr1 4612488 208 - 122678785 I a score=17052.000000 s hg38.chr19_GL383574v1_alt 72211 4 + 155864 A---ATT s panTro5.chr19 36140789 4 + 61309027 A---ATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887009 4 + 64411610 a---att i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304599 4 - 8369475 a---att i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63896864 4 - 106955855 A---ATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208970 4 + 53671032 A---ATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34662688 4 + 59248254 A---ATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4529210 4 - 13342542 A---ATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5459437 4 + 7714307 A---ATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29259272 4 + 50890351 A---ATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 890580 4 - 2385121 A---ATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2330180 4 + 4274983 A---ATT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561395 2 + 49145316 ----AT- i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5406138 2 + 8899380 ----AT- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 362500 2 - 4471408 ----AT- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3959523 4 - 30143674 A---ATT i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5478782 7 + 5549422 ACTTGTT i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 337625 4 + 643850 A---ATT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e mm10.chr7 111091519 1541 - 145441459 I e canFam3.chr1 4612488 208 - 122678785 I e cebCap1.NW_016107633v1 1612017 308 - 2680843 I a score=1428138.000000 s hg38.chr19_GL383574v1_alt 72215 121 + 155864 GAAAATGCATTGTCATAGTTA-CCTCCATGCATCTTTGTCTACGCTCCTGT-ATCCTTGACAGATAGTCCAGCCTCTGCTTAGGTGTTGCCAGGAGTGATGGACTCAGCGAACCCTCAGGCAT s panTro5.chr19 36140793 121 + 61309027 GAAAATGCATTGTCATAGTTA-CCTCCATGCATCTTTGTCTACGCTCCTGT-atccttgacagatagtccagcctctgcttaggtgtttccaggagtgatggactcagcgaaccctcaggcat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887013 121 + 64411610 gaaaatgcattgtcatagtta-cctccatgcatctttgtctacgctcctgt-atccttgacagatagtccagcctctgcttaggtgtttccaggagtgatggactcagcgaaccctcaggcat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304603 121 - 8369475 gaaaatgcattgtcatagtta-cctccatgcatctttgtctacgctcctgt-atccttgacagatagtccagcctctgcttaggtgtttccaggagtgatggactcagcgaaccctcaggcat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63896868 121 - 106955855 GAAAATGCATTGTCGTAGTTA-CCTCCATGCATCTTTGTCTACGCTCCTGT-atccttgacagatagtccatcctctgcttaggtgtttccaggagtgatggactcagcgaaccctcaggcat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30208974 122 + 53671032 GAAAATGCATTGTCGTAGTTA-TCTGCATGCATCTTTGTCTACGCTCCTGTAATACTTGACAGATAGTCCAGCCTCTGCTTAGGTGTTGCCAGGAGTGATGGACTCAGCGAACCCTCAGGCAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34662692 122 + 59248254 GAAAATGCATTGTCGTAGTTA-TCTGCATGCATCTTTGTCTACGCTCCTGTAATACTTGACAGATAGTCCAGCCTCTGCTTAGGTGTTGCCAGGAGTGATGGACTCAGCGAACCCTCAGGCAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4529214 122 - 13342542 GAAAATGCATTGTCGTAGTTA-TCTGCATGCATCTTTGTCTACGCTCCTGTAATACTTGACAGATAGTCCAGCCTCTGCTTAGGTGTTGCCAGGAGTGATGGACTCAGCGAACCCTCAGGCAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5459441 122 + 7714307 GAAAATGCATTGTCGTAGTTA-TCTGCATGCATCTTTGTCTACGCTCCTGTAATACTTGACAGATAGTCCAGCCTCTGCTTAGGTGTTGCCAGGAGTGATGGACTCAGCGAACCCTCAGGCAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29259276 122 + 50890351 GAAAATGCATTGTCGTAGTTA-TCTGCATGCATCTTTGTCTACGCTCCTGTAATACTTGACAGATAGTCCAGCCTCTGCTTAGGTGTTGCCAGGAGTGATGGACTCAGCAAACCCTCAGGCAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 890584 122 - 2385121 GAAAATGCATTGTCGTAGTTA-TCTGCATGCATCTTTGTCTACGCTCCTGTAATACTTGACAGATAGTCCAGCCTCTGCTTAGGTGTTGCCAGGAGTGATGGACTCAGCGAACCCTCAGGCAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2330184 122 + 4274983 GAAAATGCACTGTCGTAGTTA-TCTGCATGCATCTTTGCCTACGCTCCTGTAatccttgacagatagtccagcctctgcttaggtgttgccaggaatgatggactcagcgaaccctcaggcat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561398 117 + 49145316 GAAAATGCATCGTCGTAGTTA-TCTGCGTGCATCTTTatccatgcttctat-atccttgacagatagttcagcctctacttaggtgtttccaggagtgatgaactcagcaaaccct----cct i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5406140 121 + 8899380 GAAAATGCATTGTCATAGTTA-TCTGCATGCATCTTTatccatgcttctgt-atccttgacagatagttcagcctctacttaggtgtttccaggagtgatgaactcagcaaaccctcaggcat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1612325 121 - 2680843 gaaaaTGCACTGTCGTAGTTA-TCTGCATGCATCTTTatccatgcttctat-atccttgacagatagttcagcctctacttaggtgtttgcaggagtggtgaactcagcaaaccctcaggcat i cebCap1.NW_016107633v1 I 308 C 0 s aotNan1.NW_018505377v1 362502 121 - 4471408 GAAAATGTATTGTCGTAGTTA-TCTGCATGCATCTTTatccatgcttctat-atccttgacagatagttcagcctctacttaggtgtttccaggagtgatgaactcagcaaaccctcaggcat i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3959527 121 - 30143674 CAAAATGCACTGTAGCAGTTA-TCTGCCTGAGTCTTTATCCACACTAGTGG-ATCCTTGACAGACAGTCCAACCTCTACTTGGATGTTTCAAGGAGTCATAGACTCAAAGGACCCTCAGGCAT i micMur3.chr22 C 0 I 54 s otoGar3.GL873654 5478789 102 + 5549422 TTTAAAGCCATGTCATGTTTAGTCGTTTTGAGTCTTGATCTACACTAGTGT-CTATTTGACAGATAGTCCAAACTCTGT--------------------CAGACTCAAAGGAGCCTCAGGCAT i otoGar3.GL873654 C 0 I 1 s dasNov3.JH563638 337629 120 + 643850 -AGAATGCATTCTAGAGGTGG-TCTGCCTGAGTCTTTATCTGCACAAGTTT-ATCCCTGACATTTGGTTCATCCTCTGCTTGGGTGTTTGGCATTGTGACAGATTCACTGGACTCTCCAACAT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e mm10.chr7 111091519 1541 - 145441459 I e canFam3.chr1 4612488 208 - 122678785 I a score=525207.000000 s hg38.chr19_GL383574v1_alt 72336 54 + 155864 -GGCCCAGTGTTTAG-GAGGCTCAGTTGTGACATTGTAGTCCCTGCTCTTCTTAAT s panTro5.chr19 36140914 54 + 61309027 -ggcccaGTGTTTAG-GAGGCTCAGTTGTGACATTGCAGTCCCTGCTCTTCTTAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887134 54 + 64411610 -ggcccaGTGTTTAG-GAGGCTCAGTTGTGACATTGCAGTCCCTGCTCTTCTTAAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304724 54 - 8369475 -ggcccaGTGTTTAG-GAGGCTCAGTTGTGACATTGCAGTCCCTGCTCTTCTTAAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63896989 54 - 106955855 -ggcccagtgtttag-gaggctcagttctgaCATTGCAGTCCCTGCTTTTCTTAAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30209096 54 + 53671032 -GGCCCAGTGTTTAG-GAGGCTCAGTTGTGACATTGCAGTCCCTGCTCTTCTTAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34662814 54 + 59248254 -GGCCCAGTGTTTAG-GAGGCTCAGTTGTGACATTGCAGTCCCTGCTCTTCTTAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4529336 54 - 13342542 -GGCCCAGTGTTTAG-GAGGCTCAGTTGTGACATTGCAGTCCCTGCTCTTCTTAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5459563 54 + 7714307 -GGCCCAGTGTTTAG-GAGGCTCAGTTGTGACATTGCAGTCCCTGCTCTTCTTAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29259398 54 + 50890351 -GGCCCAGTGTTTAG-GAGGCTCAGTTGTGACATTGCAGTCCCTGCTCTTCTTAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 890706 54 - 2385121 -GGCCCAGTGTTTAG-GAGGCTCAGTTGTGACATTGCAGTCCCTGCTCTTCTTAAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2330306 54 + 4274983 -ggcccaGTGTTTAG-GAGGCTTAGTTGTGACATTGCAGTCCCTGCTCTTCTTAAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561515 51 + 49145316 -aaCCCAGTGGTTAG-GAGGCTCAGTTGTGACATTACACTCCCTAC---TCTGAAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5406261 51 + 8899380 -ggcccaGTGGTTAG-GAGGCTCAGTTGTGACATTACACTCCCTTC---TCTGAAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1612446 51 - 2680843 -ggcccaATGGTTAG-GAGGCTCAGTTGTGATATTACACTCCCTGC---TCTGACC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 362623 51 - 4471408 -tgcccaGTGGTTAG-GAGGCTCAGTTGTGACATTACACTCCCTGC---TCTGAAC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5478892 54 + 5549422 -GCTCTGATGATGAGAAAAGCTCTAATATTACATTGTACTGCCTGCTTTTCTTAC- i otoGar3.GL873654 I 1 C 0 s dasNov3.JH563638 337749 54 + 643850 TTCTCTCATGGTTAT-AAGGCACTAGAGTATCATAGCACTGCTTGCTTTTCCAAC- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3959648 54 - 30143674 I e mm10.chr7 111091519 1541 - 145441459 I e canFam3.chr1 4612488 208 - 122678785 I a score=714892.000000 s hg38.chr19_GL383574v1_alt 72390 55 + 155864 TGTGTGA------GGATCCCACTTGATATATTTGGCCTCATTCCTCATT-ACCCTTTAACCT s panTro5.chr19 36140968 55 + 61309027 TGTGTGA------GGATCCCACTTGATATATTTGGCCTCATTCCTCATT-ACCCTTTAACCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887188 55 + 64411610 TGTGTGA------GGATCCCACTTGATATATTTGGCCTCATTCCTCATT-ACCCTTTAACCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304778 55 - 8369475 TGTGTGA------GGATCCCACTTGATATATTTGGCCTCATTCCTCATT-ACCCTTTAACCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63897043 55 - 106955855 TGTGTGA------GGATCCCACTTGATACATCTGGCCTCATTCCTCATT-ACCCTTTAACCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30209150 55 + 53671032 CATGTGA------GGATCCCACTTGATGTATTTGGCCTCATTCCTCATT-ACCCTTTAACCT i rheMac8.chr19 C 0 I 16 s macFas5.chr19 34662868 55 + 59248254 CATGTGA------GGATCCCACTTGATGTATTTGGCCTCATTCCTCATT-ACCCTTTAACCT i macFas5.chr19 C 0 I 7 s macNem1.NW_012011689v1 4529390 55 - 13342542 CATGTGA------GGATCCCACTTGATGTATTTGGCCTCATTCCTCATT-ACCCTTTAACCT i macNem1.NW_012011689v1 C 0 I 27 s cerAty1.NW_012005268v1 5459617 55 + 7714307 CATGTGA------GGATCCCACTTGATATATTTGGCCTCATTCCTCATT-ACCCTTTAACCT i cerAty1.NW_012005268v1 C 0 I 27 s chlSab2.chr6 29259452 55 + 50890351 CATGTGA------GGATCCCACTTGATATATTTGGCCTCATTCCTTATT-ACCCTTTAACCT i chlSab2.chr6 C 0 I 27 s manLeu1.NW_012102454v1 890760 55 - 2385121 CATGTGA------GGATCCCACTTGATATATTTGGCCTCATTCCTCATT-ACCCTTTAACCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2330360 55 + 4274983 CATGTGA------GGATCCCACTTGATATATTTGGCCTCATTCCTCATT-ACCCTTTAACCT i colAng1.NW_012111697v1 C 0 I 14 s calJac3.chr22 28561566 55 + 49145316 TGTGTGA------GGATCCAACTTGATACATTTGGCCTCATTCATCATT-ACCCCTTAACCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5406312 55 + 8899380 TGTGTGA------GGATCCCACTTGATACATTTGGCCTCATTCATCATC-ACCCCTTAACCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1612497 55 - 2680843 TGTGTGA------GGATCCCACTTGATACATTTGGCCTCATTCATCATT-ACCCCTTAACCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 362674 55 - 4471408 TGTGTGA------GGATCCCACTTGATACATTTGGCCTCATTCATCATT-ACCCCTTAACCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3959702 56 - 30143674 TGTGTGA------GGGTCCCACTTGATATATTCAGCCCCATTTCTCATTGCCCTTTTAACTT i micMur3.chr22 I 54 C 0 s otoGar3.GL873654 5478946 56 + 5549422 TATGTGA------GGGTCCCATTTGATAGATTCAGCCCTGTTTCTCATTTACCCTTCAACCT i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 337803 61 + 643850 TCTGTAAAGGCCTGGGTCTCATTTGACTTACCCAGTCTTATTTTTTATA-ACCCCTTAATCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e mm10.chr7 111091519 1541 - 145441459 I e canFam3.chr1 4612488 208 - 122678785 I a score=118709.000000 s hg38.chr19_GL383574v1_alt 72445 13 + 155864 ATCTGATTCAAGC s panTro5.chr19 36141023 13 + 61309027 GTCTGATTCAAGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887243 13 + 64411610 ATCTGATTCAAGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304833 13 - 8369475 ATCTGATTCAAGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63897098 13 - 106955855 GTCTGATTCAAGC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34662930 13 + 59248254 ATCTGATTCAAGC i macFas5.chr19 I 7 C 0 s manLeu1.NW_012102454v1 890815 13 - 2385121 ATCTGATTcaagc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2330429 13 + 4274983 ATCTGATTCAAGC i colAng1.NW_012111697v1 I 14 C 0 s calJac3.chr22 28561621 13 + 49145316 ATCTGATTCAAGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5406367 13 + 8899380 ATCTGATTCAAGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1612552 13 - 2680843 ATCTGATTCAAGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 362729 13 - 4471408 ATCTGATTCAAGC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3959758 13 - 30143674 GTCTGATTCAAGA i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5479002 13 + 5549422 ATCTGATTCAAGC i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 337864 13 + 643850 ATCTGAGTCAAGC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e mm10.chr7 111091519 1541 - 145441459 I e chlSab2.chr6 29259507 27 + 50890351 I e canFam3.chr1 4612488 208 - 122678785 I e cerAty1.NW_012005268v1 5459672 27 + 7714307 I e macNem1.NW_012011689v1 4529445 27 - 13342542 I e rheMac8.chr19 30209205 16 + 53671032 I a score=21755.000000 s hg38.chr19_GL383574v1_alt 72458 6 + 155864 AAGCTG s panTro5.chr19 36141036 6 + 61309027 AAGCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887256 6 + 64411610 AAGCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304846 6 - 8369475 AAGCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63897111 6 - 106955855 AAGCTG i nomLeu3.chr10 C 0 C 0 s colAng1.NW_012111697v1 2330442 6 + 4274983 AGGTTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561634 6 + 49145316 AGGTTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5406380 6 + 8899380 AGGTTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1612565 6 - 2680843 AGGTTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 362742 6 - 4471408 AGGTTC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3959771 6 - 30143674 AAGTTG i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5479015 6 + 5549422 AGGTTG i otoGar3.GL873654 C 0 I 269 s dasNov3.JH563638 337877 6 + 643850 ATATTA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e mm10.chr7 111091519 1541 - 145441459 I e chlSab2.chr6 29259507 27 + 50890351 I e canFam3.chr1 4612488 208 - 122678785 I e manLeu1.NW_012102454v1 890828 0 - 2385121 C e cerAty1.NW_012005268v1 5459672 27 + 7714307 I e macNem1.NW_012011689v1 4529445 27 - 13342542 I e macFas5.chr19 34662943 0 + 59248254 C e rheMac8.chr19 30209205 16 + 53671032 I a score=226102.000000 s hg38.chr19_GL383574v1_alt 72464 41 + 155864 CCTCATGGTTATCTCACATACACATTGTGCTTGATTCCAAC s panTro5.chr19 36141042 41 + 61309027 CCTCATGGTTATCTCACATACACATTGTGCTTGATTCCAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887262 41 + 64411610 CCTCATGGTTATCTCACATACACATTGTGCTTGATTCCAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304852 41 - 8369475 CCTCATGGTTATCTCACATACACATTGTGCTTGATTCCAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63897117 41 - 106955855 CCTCATGGTTATCTCACATACACATTGTGCTTGATTCCAAC i nomLeu3.chr10 C 0 C 0 s colAng1.NW_012111697v1 2330448 41 + 4274983 CCTCATGGTTATCTCACGTACACATTGTGCTTGATTCCAGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561640 41 + 49145316 CCTCATGGTTATCTCTCATACACATTGTGCTTGATTCCAAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5406386 41 + 8899380 CCTCATGATTTTCTCTCATACACATTGTGCTTGATTCCAGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1612571 40 - 2680843 CCTCATGGTTATTTCTCATA-ACATTGTGCTTGATTCCAAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 362748 41 - 4471408 CCTCATGGTTATTTCTCATACACATTGTGCTTGATTCCAAC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3959777 41 - 30143674 ACTTATGGTCAACCTATATACACCCTGTGCTGGATTCCAAC i micMur3.chr22 C 0 I 116 s otoGar3.GL873654 5479290 41 + 5549422 ccTCATGGTCATCTTTTATACACACTGTCCTGGATTCCAAC i otoGar3.GL873654 I 269 C 0 s dasNov3.JH563638 337883 37 + 643850 ACTCAAGGTCATCTTTT----ACACTGTGCTTGATTCAAAC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e mm10.chr7 111091519 1541 - 145441459 I e chlSab2.chr6 29259507 27 + 50890351 I e canFam3.chr1 4612488 208 - 122678785 I e manLeu1.NW_012102454v1 890828 0 - 2385121 C e cerAty1.NW_012005268v1 5459672 27 + 7714307 I e macNem1.NW_012011689v1 4529445 27 - 13342542 I e macFas5.chr19 34662943 0 + 59248254 C e rheMac8.chr19 30209205 16 + 53671032 I a score=36882.000000 s hg38.chr19_GL383574v1_alt 72505 8 + 155864 TCCATCCC s panTro5.chr19 36141083 8 + 61309027 TCCATCCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887303 8 + 64411610 TCCATCCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304893 8 - 8369475 TCCATCCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63897158 8 - 106955855 TCTATCCC i nomLeu3.chr10 C 0 C 0 s colAng1.NW_012111697v1 2330489 8 + 4274983 TCCATCCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561681 8 + 49145316 TCCATCCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5406427 8 + 8899380 TCCATCCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1612611 8 - 2680843 TCCATCCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 362789 8 - 4471408 TCCATCCt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5479331 8 + 5549422 TCTAACCT i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 337920 8 + 643850 TCTAACtt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3959818 116 - 30143674 I e mm10.chr7 111091519 1541 - 145441459 I e chlSab2.chr6 29259507 27 + 50890351 I e canFam3.chr1 4612488 208 - 122678785 I e manLeu1.NW_012102454v1 890828 0 - 2385121 C e cerAty1.NW_012005268v1 5459672 27 + 7714307 I e macNem1.NW_012011689v1 4529445 27 - 13342542 I e macFas5.chr19 34662943 0 + 59248254 C e rheMac8.chr19 30209205 16 + 53671032 I a score=31255.000000 s hg38.chr19_GL383574v1_alt 72513 9 + 155864 cattcattt s panTro5.chr19 36141091 9 + 61309027 cattcattt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887311 9 + 64411610 cattcattt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304901 9 - 8369475 cattcattt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63897166 9 - 106955855 cattcattt i nomLeu3.chr10 C 0 C 0 s colAng1.NW_012111697v1 2330497 7 + 4274983 CATTCAT-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561689 9 + 49145316 CATTCATTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5406435 9 + 8899380 CATTCATTT i saiBol1.JH378197 C 0 I 1624 s cebCap1.NW_016107633v1 1612619 5 - 2680843 CATTT---- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 362797 9 - 4471408 cattcattt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5479339 5 + 5549422 AATTT---- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4612696 9 - 122678785 Catgcattt i canFam3.chr1 I 208 I 5 s dasNov3.JH563638 337928 9 + 643850 cattcattt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3959818 116 - 30143674 I e mm10.chr7 111091519 1541 - 145441459 I e chlSab2.chr6 29259507 27 + 50890351 I e manLeu1.NW_012102454v1 890828 0 - 2385121 C e cerAty1.NW_012005268v1 5459672 27 + 7714307 I e macNem1.NW_012011689v1 4529445 27 - 13342542 I e macFas5.chr19 34662943 0 + 59248254 C e rheMac8.chr19 30209205 16 + 53671032 I a score=366228.000000 s hg38.chr19_GL383574v1_alt 72522 96 + 155864 accaaatatacagaattcttcagatatgccaggcactatgttgagcattggt-gct------gaccgatgtaggcccagcccttttgatgtttacattttggt s panTro5.chr19 36141100 96 + 61309027 accaaatatacagaattcttcagatatgccaggcactatgttgagcattggt-gct------gaccgatgtaggcccagcccttttgatgtttacattttggt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887320 96 + 64411610 accaaatatacagaattcttcagatatgccaggcactatgttgagcattggt-gct------gaccgatgtaggcccagcccttttgatgtttgcattttggt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6304910 96 - 8369475 accaaatatacagaattcttcagatatgccaggcactatgttgagcattggt-gct------gaccgatgtaggcccagcccttttgatgtttacattttggt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63897175 96 - 106955855 accaaatatacagaattcttcagatattccaggcactatgttgagcattggt-gct------gactgatgtaggcccagcacttttgatgtttacattttggt i nomLeu3.chr10 C 0 C 0 s colAng1.NW_012111697v1 2330504 86 + 4274983 ----------CAGAATTCTTCAGatatgccaggcactatgctgagcattggt-gct------gaccaacgtagacccagcccttttgatgtttacattctggt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561698 96 + 49145316 TCTAAATACACATAATTCTTCAGATATGCCAGGAACTCTGTTGAGCATTGGC-ACT------GACAGATGCAGGCCCACCCCTTTTGATGTTTCCATTCTGGT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1612624 96 - 2680843 TCTAAATATACATAATTCTTCAGatatgccaggaactgtgttgagcattggc-act------gacagatgcaggcccaccccttttgatgtttacattctggt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 362806 96 - 4471408 tctaaatatacataattcttcagatatgccaggaactgtgttgagcattggc-act------gacagatgcaggcccaccccttttgatgtttacattctggt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5479344 92 + 5549422 TGCAAATACACAGAATTCTCCATGTTTTCCAGACTCTATGTGG-----TGATAACA------AACAGATGCAGTCCCGGCCTTTTTGACATTTATGTCCCGGT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4612710 101 - 122678785 ttgaaacctattgagttcttcatattcagcatgcactgtgctggatagtagt-ggtaagcaaaacagatgcagtcccagtcttcttggtgttt-tagttcagt i canFam3.chr1 I 5 I 1 s dasNov3.JH563638 337937 102 + 643850 accaaatatactgaattcttcaaatatgtcaggcactgtgctgggcattgat-gagaagcaaagcagatacatccccagccttcttggtgtttagaatccaac i dasNov3.JH563638 C 0 I 1 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3959818 116 - 30143674 I e mm10.chr7 111091519 1541 - 145441459 I e chlSab2.chr6 29259507 27 + 50890351 I e saiBol1.JH378197 5406444 1624 + 8899380 I e manLeu1.NW_012102454v1 890828 0 - 2385121 C e cerAty1.NW_012005268v1 5459672 27 + 7714307 I e macNem1.NW_012011689v1 4529445 27 - 13342542 I e macFas5.chr19 34662943 0 + 59248254 C e rheMac8.chr19 30209205 16 + 53671032 I a score=663435.000000 s hg38.chr19_GL383574v1_alt 72618 157 + 155864 gggagacagacaTAGCTAAAAGTCA---GGTCCCCCCTTTCACT---TATCCTTT---ACAGCCTTGCCCAAGTTTTGCTCT----GT---------CTTCTCTTCCTTCCTACACTGATTTCCTCCTCTT-CTGA---CCTGTGGCTA---------TCTGCTTTCTTTGGCACACATTTTAAATACACTG s panTro5.chr19 36141196 157 + 61309027 gggagacagacaTAGCTAAAAGTCA---GGTCCCCCCTTTCact---tatccttt---acagccttgcccaagttttgctct----gt---------cttctcttccttcctacactgatttcctcctctt-ctga---cctgtggcta---------tctgctttctttggcacacattttaaatacactc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887416 157 + 64411610 gggagacagacatAGCTAAAAGTCA---GGTCCCCCCTTTCact---tatccttt---acagccttgcccaagttttgctct----gt---------cttctcttccttcctacactgatttcctcctctt-ctga---cctgtggcta---------tctgctttctttggcacacattttaaatacactc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6305006 157 - 8369475 gggagacagacatAGCTAAAAGTCA---GGTCCCCCCTTTCact---tatccttt---acagccttgcccaagttttgctct----gt---------cttctcttccttcctacactgatttcctcctctt-ctga---cctgtggcta---------tctgctttctttggcacacattttaaatacactc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63897271 157 - 106955855 gggagacagacaTAGCTAAAAGTCA---GGTCCCCGCTTTGACT---TATCCTTT---ACAGCCTTGCCCAAGTTTTGCTCT----GT---------CTTCTCTTTCTTCCTACACTGATTTCCTCCTCTT-CTGA---CCTGTGGCTA---------TCTGCTTTCTTTGGCACACATTTTAAATACACTC i nomLeu3.chr10 C 0 C 0 s colAng1.NW_012111697v1 2330590 157 + 4274983 aggaggcagacaTAGCTGAAAGTCA---GGTCTCCTCTTTCact---tatccttt---acagtcttgcccaagttttgctct----gt---------cttctcttctttcctacactgatttcctcctttt-ctga---cctgtggctg---------tctgcttgctttggcacccattttgaatatactc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561794 156 + 49145316 GGGAGGCAGACATAGCTAAAAGTCA---GATCCCCCCTTTCACT---TACCCTTTACAACAGCCTTGTCCAAGTTTTGCTCT----GT---------CTTCTCTTCCTTC-----CTGATTTCCTCCTTTTACTGA---CCTGTGGCTA---------TCTGCTTTCTTTGGCACACATTTTAAATACACTC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1612720 161 - 2680843 gggaggcagacaTAGCTAAAAGTCA---GGTGCCGCCTTTCact---tatcctttaaaacagccttgtccaagttttgctct----gt---------cttctcttccttcctacactgatttcctcctttttctga---cctgtggcta---------tctgctttctttggcacacattttaaatacactc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 362902 161 - 4471408 gggaggcagacaTAGCTAAAAGTCA---GGTCCCACCTTTCACT---TATCCTTTCCAACAGCCTTGTCCAAGTTTTGCTCT----GT---------CTTCTCTTCCTCCCTACAGTGATTTCCTCCTTTTTCTGA---CTTGTGGCTA---------TCTGCTTTCTTTGGCACACATTTTAAATACATTC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3959934 152 - 30143674 gggagacagacctgGCTAAAAGTCA---GGTGCCCCCTTTCACT---TACCCTTC---ACAGtcttgccccaggtttgctct----gt---------cttctcttcct----atactgatttcc-tctttt-ctgacctcctgtgg-ta---------tctgctttctttggcgcacattttaactgtgt-- i micMur3.chr22 I 116 C 0 s otoGar3.GL873654 5479436 101 + 5549422 -------------------------------GCCCCCTTTTACT---TA------------------CCCAAGATTTCCCCT----GT---------CTTCTTGGCCT-----TCCTACCCTCC-CTTCTT-CTGACCCCCTG-----------------TGTTTTCTTTGGCACTCATTTTAAGGACAC-- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4612812 162 - 122678785 gggaggtagacatatCTAAAAGTCAAGGGGTTCCCTTTTACACCCTACACCCTTC---ACAGTCTTGTCCAAAGTTTGCTCT----GTCCTTGGGAACTTTTCTTCCTTCTGGCACTAATTTCTTCCTTTT-CTGA---CTCCTAGGTA-------------------TTGGCACACATTTTGAATACATTC i canFam3.chr1 I 1 I 1 s dasNov3.JH563638 338040 158 + 643850 gggtgacagacaCAGCTAGAAGTT----GGCTCTTCCCTACACT---TAACTTCC---ACAGTCTTGCCC------TGCCCTTGAAAA---------CTTCTGTTCCTTCCTACACTGATTTCTCCCTTTT-CTAATCTCCTGTTAATATTTGCTTCATTTGCTTTCCTTGGCATACCTGTTGG-------- i dasNov3.JH563638 I 1 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e mm10.chr7 111091519 1541 - 145441459 I e chlSab2.chr6 29259507 27 + 50890351 I e saiBol1.JH378197 5406444 1624 + 8899380 I e manLeu1.NW_012102454v1 890828 0 - 2385121 C e cerAty1.NW_012005268v1 5459672 27 + 7714307 I e macNem1.NW_012011689v1 4529445 27 - 13342542 I e macFas5.chr19 34662943 0 + 59248254 C e rheMac8.chr19 30209205 16 + 53671032 I a score=226476.000000 s hg38.chr19_GL383574v1_alt 72775 45 + 155864 ACATTCCCTATTTTT----TGTATTTAGTTTT-----GTTCTGCATCACCAGCT s panTro5.chr19 36141353 45 + 61309027 acattccctattttt----tgtatttagtttt-----gttctgcatcaccagct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887573 45 + 64411610 acattccctattttt----tgtatttagtttt-----gttctgcatcaccagct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6305163 45 - 8369475 acattccctattttt----tgtatttagtttt-----gttctgcatcaccagct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63897428 45 - 106955855 ACATTCACTATTTTT----TGTATTTAGTTTT-----GTTCTGCATCACCAGCT i nomLeu3.chr10 C 0 C 0 s colAng1.NW_012111697v1 2330747 45 + 4274983 acattccttattttt----tgtatttagtttt-----gttctgcatcaccagct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561950 46 + 49145316 ACATTCCCTATTTTTT---TGTATTTAGTTTT-----ATTCTGTATCACTAGCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5408068 49 + 8899380 ACATTCCCTATTTTTTTTGTGTGTTTAGTTTT-----ATTCTGTATCACTAGCT i saiBol1.JH378197 I 1624 C 0 s cebCap1.NW_016107633v1 1612881 45 - 2680843 acattccctattttt----tgtatttagtttt-----attctgtatcactagct i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 363063 45 - 4471408 ACATTCCCTATTTTT----TGTATTTAGTTTT-----ATTCTATATCACTAGCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3960086 42 - 30143674 ---gttcctgtttca----tgtattttgtttt-----gttctgcatcaccagct i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5479537 37 + 5549422 ---GTTCTCATTTCA----TGTGTTTTGTTTT-----CT-----GTCACCAGCT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4612975 40 - 122678785 ATGTTCCTTATTTCA----TGT-----GTTTT-----GTTCTGCGTTTCCAGCT i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 338198 31 + 643850 -----------------------TTTGGTTTTTTTAAATTCTGCATTGCCAACT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e mm10.chr7 111091519 1541 - 145441459 I e chlSab2.chr6 29259507 27 + 50890351 I e manLeu1.NW_012102454v1 890828 0 - 2385121 C e cerAty1.NW_012005268v1 5459672 27 + 7714307 I e macNem1.NW_012011689v1 4529445 27 - 13342542 I e macFas5.chr19 34662943 0 + 59248254 C e rheMac8.chr19 30209205 16 + 53671032 I a score=2517532.000000 s hg38.chr19_GL383574v1_alt 72820 191 + 155864 AGATGAGAACCTCTTGGCTTTAGTGAATATGTATTCTACTTTTCTTTCCATGACAACA---CTCAGCTCAAC-ATGGAGCCATAGTGGGCTTGAAGTAATTGCTTGTCATGTTGATTAGGAATTTGCCACTCCAGCCTTCA---GTGAGACCAAAGGTCTGTCA-----ATGTAGC---TAG-CCT-TTGATTGTTCATTCCAGAGTT s panTro5.chr19 36141398 191 + 61309027 agatgagagcctcttggctttagtgaatatgtattctacttttctttccaccacaaca---ctcagctcaac-atggagccatagtgggcttgaagtaattgcttatcatgttgattAGGAATTTGCCACTCCAGCCTTCA---GTGAGGCCAAAGGTCTGTCA-----ATGTAGC---TAG-CCT-TTGATTGTTCATTCCAGAGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887618 191 + 64411610 agatgagagcctcttggctttagtgaatatgtattctacttttctttccaccacaaca---ctcagctcaac-atggagccatagtgggcttgaagtaattgcttatcatgttgattAGGAATTTGCCACTCCAGCCTTCA---GTGAGGCCAAAGGTCTGTCA-----ATGTAGC---TAG-CCT-TTGATTGTTCATTCCAGAGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6305208 191 - 8369475 agatgagaacctcttggctttagtgaatatgtattctacttttctttccacgacaaca---ctcagctcgac-atggagccatagtgggcttgaagtaattgcttatcatgttgattAGGAATTTGCCACTCCAGCCTTCA---GTGAGGCCAAAGGTCTGTCA-----ATGTGGC---TAG-CCT-TTGATTGTTCATTCCAGAGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63897473 191 - 106955855 AGATAAGAACCTCTTGGCTTTAGTGAATATGTATTCTACTTTTCTTCCCACCACAGCA---CTCAGCTCAAC-ATGGAGCCATAGTGGGCTTGAAGTAATTGCTTATCATGTTGATGAGGAATTTGCCACTCCAGCCTTCA---GTGAGGCCAAAGGTCTGTCA-----GTGTAGC---TAG-CCC-TTGATTGTTCATTCCAGAGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30209221 192 + 53671032 AGATGAGAACCTCTTGGCTTTagtgaatatgtattctacttttctttccaccacaaca---ctcagctcaacaatggagccatagtgggcttgaagtaattgcttatcatgttgattAGGAATTTGCCACTCCAGCCTTCA---GTGAAGCCAAAGGTCTGTCA-----GTGTGGC---TAG-CCC-TTGATTGTTCATTCCAGAGTT i rheMac8.chr19 I 16 C 0 s macFas5.chr19 34662943 192 + 59248254 AGATGAGAACCCCTTGGCTTTAGTGAATATGTATTCTACTTTTCTTTCCACCACAACA---CTCAGCTCAACAATGGAGCCATAGTGGGCTTGAAGTAATTGCTTATCATGTTGATTAGGAATTTGCCACTCCAGCCTTCA---GTGAAGCCAAAGGTCTGTCA-----GTGTGGC---TAG-CCC-TTGATTGTTCATTCCAGAGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4529472 192 - 13342542 agatgagaacctcttggctttagtgaatatgtattctacttttctttccaccacaaca---ctcagctcaacaatggagccatagtgggcttgaagtaattgcttatcatgttgattAGGAATTTGCCACTCCAGCCTTCA---GTGAAGCCAAAGGTCTGTCA-----GTGTGGC---TAG-CCC-TTGATTGTTCATTCCAGAGTT i macNem1.NW_012011689v1 I 27 C 0 s cerAty1.NW_012005268v1 5459699 192 + 7714307 agatgagaacctcttgactttagtgaatatatattccacttttctttccaccacaaca---ctcagctcaacaatggagccatagtgggcttgaagtaattgcttatcatgttgattAGGAATTTGCCACTCCAGCCTTCA---GTGAAGCCAAAGGTCTGTCA-----GTGTGGC---TAG-CCC-TTGATTGTTCATTCCAGAGTT i cerAty1.NW_012005268v1 I 27 C 0 s chlSab2.chr6 29259534 192 + 50890351 AGATGAGAACCTCTTGGCTTTAGTGAATATGTATTCTACTTTTCTTTCCACCACAACA---CTCAGCTCAACAATGGAGCCATAGTGGGCTTGAAGTAATTGCTTATCATGTTGATTAGGAATTTGCCACTCCAGCCTTCA---GTGAGGCCAAAGGTCTGTCA-----GTGTGGC---TAG-CCC-TTGATTGTTCATTCCAGAGTT i chlSab2.chr6 I 27 C 0 s manLeu1.NW_012102454v1 890828 192 - 2385121 agatgagaacctcttggctttagtgaatatgtattctacttttctttccaccacaaca---ctcagctcaacaatggagccatagtgggcttgaagtaattgcttatcatgttgattAGGAATTTGCCACTCCAGCCTTCA---GTGAAGCCAAAGGTCTGTCA-----GTGTGGC---TAG-CCC-TTGATTGTTCATTCCAGAGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2330792 192 + 4274983 agatgagaacctcttggctttagtgaatatgtattctacttttctttccaccacaaca---ctcagctcaacaatggagccatagtgggcTTGAAGTAATCGCTTATCATGTTGGTTAGGAATTTGCCACTCCAGCCTTCA---GTGAGGCCAAAGGTTTGTCA-----GTGTGGC---TAG-CCC-TTGATTGTTCATTCCAGAGTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28561996 194 + 49145316 AAATGAGAACCTCTTGGCTTTAATGAAAATGTATTTTACTTTTCTTTCCACCACAACATGCTGCAGCTCAAC-ATGAAGCCATAGTGGGCTTGAAGTAATTGCTTATTATGTTAATTAGGAATTCCCCACTCCAGCCTTCA---GTGAGGCCAAC-ATCTGTCA-----GTGTGGC---TAGCCCC-TTGATTTTTCATTCCAGAATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5408117 190 + 8899380 AGATGAGAACTTCTTGGCTTTAATGAATATGTGTTCTACTTTTCTTTCCACCACAACA---TGCAGCTCAAC-ATGAAACCATAGTGGGCTTGAAGTAATTGCTTATTATGTTGATTAGGAATTCACCACTCCAGCCTTCA---GTGAGGCCAAC-ACCTGTCA-----GTGTGGC---TAG-CCC-TTGATTTTTCATTCCAGAATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1612926 190 - 2680843 agatgagaacctcttggctttaatgaatatgtattctacttttctttccaccacaaca---tgctgctcaac-atgaagccatagtgggcttgaagtaatcgtttatcatgttgattAGGAATTCGCCACTCCAGCCTTCA---GTGAGGCCAAC-GTCTGTCA-----GTATGGC---TAG-CCC-TTGATTTTTCATTCCAGAATT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 363108 187 - 4471408 AGATGAGAACCTCTTGGCTTTAATGAATATGTATTCTACTTTTCTTTCCACCACAACA---TGCAGCTCAAC-ATGAAGCCATAGTGGGCTTGAAGTAATTGCATATCATG---ATTAGGAATTCGCCACTCCAGCCTTCA---GTGAGGCCAAC-ATCTGTCA-----GTGTGGC---TAG-CCC-TTGATTTTTCATTCCAGAATT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3960128 187 - 30143674 agatgagaacctcttggcattagtgaatatgtactctacttttcttt-aaccaaaaca---cctaactcagc-atgaagccattgtggCCTTGAAGTAGTTGCTTATCATGTTGATTAGGAATTTGCTACTGCAGCCTTCA---GAAAGGCCACAGGTCCATCA-------GCGGC---TAG-CCC-CTGATTATCCATTCCAGATT- i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5479574 193 + 5549422 AGATGAGAACCTCTTGGTATTAGTCAGTATGTGTTTTACTTTTCTTT-CACCAAAACA---CTTAGCTCAAC-TTGAAGCCATAGTGAGCTTGAAGTAATTGGTTATCATGCTGA-TAGGAATTCACTgcagtggctcacacctgtaataccagcactctaggaagctgaggcggg---tgg-attgctga-----cactcaggagtt i otoGar3.GL873654 C 0 I 315 s canFam3.chr1 4613015 180 - 122678785 AGATATGAGCCTCTTGGCATTAGTGAACGTGTATTTTACTTTCATTTTCATCAGTGGA---C-----------ATGGAACCATAATGGG-TTAACGTGAGTGCCCACCATGTTGATTAGGAATACAGTAATTCAGCCTTCA---GTAAGGTAGAAGGTCCATTG-----GTATGGC---TAG-TCC-TTGATTGTGCATTCCAATGTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 338229 185 + 643850 ATTTGGGAATCTCTTGGTATTAGTGAATATGTATTCTACTTTTCTTTCCACCAAAATA---CCTTGTTTAGT-ATGAAGCCATAATGGGCTCAAA-----TGCTTCGCATGTTGATGACAAATAT---ACTTCAGCCTTCA---GTGAGGCTGCAGGTCACTCA------TGGGACCTGTAG-CCC-TTGATTGTCCATCACAGAGTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e mm10.chr7 111091519 1541 - 145441459 I a score=532503.000000 s hg38.chr19_GL383574v1_alt 73011 44 + 155864 GAATAATCCTTTCATCTGCCACTAGAGCCCCGAAC---CCAGCAGCC s panTro5.chr19 36141589 44 + 61309027 GAAAAATCCTTTCATCTGCCACTAGAGCCCCGAAC---CCAGCAGCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887809 44 + 64411610 GAAAAATCCTTTCATCTGCCACTAGAGCCCCGAAC---CCAGCAGCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6305399 43 - 8369475 -AATAATCCTTTCATCTGCCACTAGAGCCCCGAAC---CCAGCAGCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63897664 44 - 106955855 GAATAATCCTTTCATCTGCCACTAGAGCCCCGAAC---CCAGCAGCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30209413 44 + 53671032 GCATAACCCTTTCATCTGCCACTAGAGCCCCGACC---CCAGCAGCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34663135 44 + 59248254 GCATAACCCTTTCATCTGCCACTAGAGCCCCGACC---CCAGCAGCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4529664 44 - 13342542 GCATAACCCTTTCATCTGCCACTAGAGCCCCGACC---CCAGCAGCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5459891 44 + 7714307 GCATAACCCTTTCATCTGCCACTAGAGCCCCGACC---CCAGCAGCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29259726 44 + 50890351 GCATAACCCTTTCATCTGCCACTAGAGCCCCGACC---CCAGCAGCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 891020 44 - 2385121 GCATAACCCTTTCATCTGCCACTAGAGCCCCGACC---CCAGCAGCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2330984 44 + 4274983 GAATAACCCTTTCATCTGCCACTAGAGCCCCGACC---CCAGCAGCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28562190 44 + 49145316 GAATAACCCTTTCATCTGCCACTAGAACCCTGACC---CCAGCAGCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5408307 44 + 8899380 GAATAACCCTTTCATCTGCCACTAGAACCCTGACC---CCAGCAGCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1613116 44 - 2680843 GAATAACCCTTTCATCTGCCACTAGAACCCTGACC---CCAGCAGAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 363295 44 - 4471408 GAATAACCCTTTCATCTGCCACTAGAACCCTGACC---CCGGCAGCC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3960315 44 - 30143674 GAATGACCCTTTCATTTGACACTAGAGCCCTGACC---TCAGCAGCC i micMur3.chr22 C 0 I 149 s canFam3.chr1 4613195 47 - 122678785 AAATGACCCTTATGTCTGCCACTAGAGCCCTTGCCATTTCCGCAGTC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 338414 22 + 643850 CTGTGACTCCTTT-------------------------TCAGCAGCC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e otoGar3.GL873654 5479767 315 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I a score=1702587.000000 s hg38.chr19_GL383574v1_alt 73055 154 + 155864 CTACACCTCCTAAATCATAAAATCATTTCACCTGGCACCTTTAAAGGTAGAAAATGGTGAGTGATCACTGTCACATAAAGGAGATTTACCACTGAAGATTAAACTTGTATCTGAA---ACATCTAACACTTCCTCCCAGAGATGGACATGGATGACA s panTro5.chr19 36141633 154 + 61309027 CTACACCTCCTAAATCATAAAATCATTTCACCTGGCACCTTTAAAGGTAGAAAATGGTGAGTGATCACTGTCACATAAAGGAGATTTACCACTGAAGATTAAACTTGTATCTGAA---ACATCTAACACTTCCTCCCAGAGATGGACATGGATGACA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39887853 154 + 64411610 CTACACCTCCTAAATCATAAAATCATTTCACCTGGCACCTTTAAAGGTAGAAAATGGTGAGTGATCACTGTCACATAAAGGAGATTTACCACTGAAGATTAAACTTGTATCTGAA---ACATCTAACACTTCCTCCCAGAGATGGACATGGATGACA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6305442 154 - 8369475 CTACACCTCCTAAATCATAAAATCATTTCACCTGGCACCTTTAAAGGTAGAAAATGGTGAGTGATCACTGTCAAATAAAGGAGATTTACCACTGAAGATTAAACTTGAATCTGAA---ACATCTAACACTTCCTCCCAGAGATGGACATGGATGACA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63897708 154 - 106955855 CTACACCTCCTAAATCATAAAATCATTTCACCTGGCACCTTTAAAGGTAGAAAATGGTGAGTGATCACTGTCACATAAAGGAGATTTACCACTGAAGATTAAACTCGTATCTGAA---ACATCTAACACTTCCTCCCAGAGATAGACATGGATGACA i nomLeu3.chr10 C 0 I 1 s rheMac8.chr19 30209457 153 + 53671032 CTACACCTCCTAAATTATGAAATCATTTCACCTTGCACCTTTAAAGGTAGAAAATGGTGAGTGATCACTGT-ACATAAAGGAAATTTACCACTGAAGATTAAACTCATATCTGAA---ACATCTAACACTTCCTCCCAGAGATGGACATGGATGACA i rheMac8.chr19 C 0 I 1 s macFas5.chr19 34663179 153 + 59248254 CTACACCTCCTAAATTATGAAATCATTTCACCTTGCACCTTTAAAGGTAGAAAATGGTGAGTGATCACTGT-ACATAAAGGAAATTTACCACTGAAGATTAAACTCATATCTGAA---ACATCTAACACTTCCTCCCAGAGATGGACATGGATGACA i macFas5.chr19 C 0 I 1 s macNem1.NW_012011689v1 4529708 153 - 13342542 CTACACCTCCTAAATTATGAAATCATTTCACCTTGCACCTGTAAAGGTAGAAAATGGTGAGTGATCACTGT-ACATAAAGGAAATTTACCACTGAAGATTAAACTCATATCTGAA---ACATCTAACACTTCCTCCCAGAGATGGACATGGATGACA i macNem1.NW_012011689v1 C 0 I 1 s cerAty1.NW_012005268v1 5459935 153 + 7714307 CTACACCTCCTAAATTATGAAATCATTTCACCTTGCACCTTTAAAGGTAGAAAATGGTGAGTGATCACTGT-ACATAAAGGAAATTTACCACTGAAGATTAAACTCATATCTGAA---ACATCTAACACTTCCTCCCAGAGATGGACATGGATGACA i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29259770 153 + 50890351 CTACACCTCCTAAATTATGAAATCATTTCACCTTGCACCTTTAAAGGTAGAAAATGGTGAGTGATCACTGT-ACATAAAGGAAATTTACCACTGAAGATTAAACTCATATTTGAA---ACATCTAACACTTCCTCCCAGAGATGGACATGGATGACA i chlSab2.chr6 C 0 I 1 s manLeu1.NW_012102454v1 891064 153 - 2385121 CTACACCTCCTAAATTATGAAATCATTTCACCTTGCACCTTTAAAGGTAGAAAATGGTGAGTGATCACTGT-ACATAAAGGAAATTTACCACTGAAGATTAAACTCATATCTGAA---ACATCTAACACTTCCTCCCAGAGATGGACATGGATGACA i manLeu1.NW_012102454v1 C 0 I 1 s colAng1.NW_012111697v1 2331028 154 + 4274983 CTACACCTCCTAAATCATGAAATCATTTCACCTTGCACCTTTAAAGGTAGAAAATGGTGAGTGATCACTGTCACATAAAGGAAATTTACCACTGAAGATTAAACTCATATCTGAA---ACATCTAACACTTCCTCCCAGAGATGGACATGGATGACA i colAng1.NW_012111697v1 C 0 I 1 s calJac3.chr22 28562234 154 + 49145316 CTACACCTCCTAAATCATAAAATCATTTCACCTGGCACCTTTAAAGGTAGGAAATGGTGAGTGACCAGTGTCACATAAAGGAGATTTATCTCTGAAGATTAAACTTGTATCTGAA---ACATCTAACACGTCCTCCCAGAGATGGACATAGATGACA i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5408351 154 + 8899380 CTACACCTCCTAAATCATAAAATCATTTCACCTGGCACCTTTAAAGGTAGGAAATGGTGAGTGACCAGTGTCACATAAAGGAGATTTATCTTTGAAGATTAAACTTGTATCTGAA---ACATCTAACACTTCCTCCCAGAGATGGACATGGATGACA i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107633v1 1613160 154 - 2680843 CTACACCTCCTAAATCATAAGATCATTTCACCTTGCACCTTTAAAGGTAGGAAATGGTGAGTGACCAGTGTCACATAAAGGAGATTTATCTCTGAAGATTAACCTCGTATCTGAA---ACATCTAACACTTCCTCCCAGAGATGGACATGGATGACA i cebCap1.NW_016107633v1 C 0 I 1 s aotNan1.NW_018505377v1 363339 154 - 4471408 CTACACCTCCTAAATCATAAAATCATTTCACCTGGCACCTTTAAAGGTAGGAAATGGTGAGTGGCCAGTGTCACATAAAGGAGATTTATCTCTGAAGATTAAACTTGTATCTGAA---ACATCTAACACTTCCTCCCAGAGATGGACATGGATGACA i aotNan1.NW_018505377v1 C 0 I 1 s canFam3.chr1 4613242 144 - 122678785 -GACAGCATCTAAATCATA--------TCACCTGGCACCTTTAAAAGCAG-AGATAGTGAGGGATCACTATTACATGAAGGAAATTTACCTTCAAGGATTAAATTCCTTTCTAAAACTACATCTAATACT---TCTCAGAAATGGAGGTCAATGGCA i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 338436 91 + 643850 -TGTACCTTCTAATTGCTGTAAT--------TTGGTACCTTTGAGGGAGGGAAATAGTGAGTGATC--TTTTATTTA---GAGATTTACC--------------------TTGAA--------------------------------ATGGATGCCA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960359 149 - 30143674 I e otoGar3.GL873654 5479767 315 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I a score=2107966.000000 s hg38.chr19_GL383574v1_alt 73209 172 + 155864 -------TTTCTGCAGCCTTCATGAAATGAGTT-GGCTTTATTTTTTGTGCTATATTAGCATGAGT--CATTGTGGTTTG-----GGGGTAAGCATAAATGAGCTTGGTTGTTTAATG-AAAACATGGGTAAAGAT-AAAATCATAAAGTTTTAGAA-TCCTTA--AAAGAATCAGCCAAACTAGAATCTCT s panTro5.chr19 36141787 172 + 61309027 -------TTTCTGCAGCCTTCATGAAATGCATT-GGCTTTATTTTTTGTGCTATATTAGCATGAGT--CATTGTGGTTTG-----GGGGTAAGCATAAATGAGCTTGGTTGTTTAATG-AAAACATGGGTAAAGAT-AAAATCATAAAGTTTTAGAA-TCCTTA--AAAGAATCAGCCAAACTAGAATCTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39888007 172 + 64411610 -------TTTCTGCAGCCTTCATGAAATGCGTT-GGCTTTATTTTTTGTGCTATATTAGCATGAGT--CATTGTGGTTTG-----GGGGTAAGCATAAATGAGCTTGGTTGTTTAATG-AAAACATGGGTAAAGat-aaaatcataaagttttagaa-tcctta--aaagaatcagccaaactagaatctct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6305596 172 - 8369475 -------TTTCTGCAGCCTTCATGAAATGAGTT-GGCTTTATTTTTTGTGCTATATTAGCATGAGT--CATTGTGGTTTG-----GGGGTAAGCATAAATGAGCTTGGTTGTTTAATG-AAAACATGGGTAAAGat-aaaatcataaagttttagaa-tcctta--aaagaatcagccaaactagaatctct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63897863 172 - 106955855 -------TTTCCGCAGCCTTCATGAAATGAGTT-GGCTTTATTTTTTGTGCTATATTAGCAGGAGT--CATTGTGGTTTG-----GGGGTAAGCATAAACGAGCTTGGTTGTTTAATG-AAAACATGGGTAAAGat-aaaatcatcaagttttagaa-tcctta--aaagaatcagccaaactagaatctct i nomLeu3.chr10 I 1 C 0 s rheMac8.chr19 30209611 172 + 53671032 -------TTTCTGCAGCTTTCATGAAATGAGTT-GGCTTAATTTTTTGTGCTATATTAGCATAAGT--CATTGTAGTTTG-----GGGGTAAGCATAAACGAGATTGGTTGTTTAATG-AAAACATGGGTAAAGAT-AAAAGCATAAAGTTTTAGAA-TCGTTA--AAAGAATCAGCCAAACTAGAATCTCT i rheMac8.chr19 I 1 C 0 s macFas5.chr19 34663333 172 + 59248254 -------TTTCTGCAGCTTTCATGAAATGAGTT-GGCTTAATTTTTTGTGCTATATTAGCATAAGT--CATTGTAGTTTG-----GGGGTAAGCATAAACGAGATTGGTTGTTTAATG-AAAACATGGGTAAAGAT-AAAAGCATAAAGTTTTAGAA-TCGTTA--AAAGAATCAGCCAAACTAGAATCTCT i macFas5.chr19 I 1 C 0 s macNem1.NW_012011689v1 4529862 172 - 13342542 -------TTTCTGCAGCTTTCATGAAATGAGTT-GGCTTAATTTTTTGTGCTATATTAGCATAAGT--CATTGTAGTTTG-----GGGGTAAGCATAAACGAGATTGGTTGTTTAATG-AAAACATGGGTAAAGAT-AAAAGCATAAAGTTTTAGAA-TCGTTA--AAAGAATCAGCCAAACTAGAATCTCT i macNem1.NW_012011689v1 I 1 C 0 s cerAty1.NW_012005268v1 5460089 172 + 7714307 -------TTTCCGCAGCTTTCATGAAATGAGTT-GGCTTAATTTTTTGTGCTATATTAGCGTAAGT--CATTGTAGTTTG-----GGGGTAAGCATAAACGAGATTGGTTGTTTAATG-AAAACATGGGTAAAGAT-AAAAGCATAAAGTTTTAGAA-TCCTTA--AAAGAATCAGCCAAACTAGAATCTCT i cerAty1.NW_012005268v1 I 1 C 0 s chlSab2.chr6 29259924 172 + 50890351 -------TTTCTGCAGCTTTCATGAAATGAGTT-GGCTTAATTTTTTGTGCTATATTAGCATGAGT--CATTGTAGTTTG-----GGGGTAAGCATGAACGAGATTGGTTGTTTAATG-AAAACATGGGTAAAGAT-AAAAGCATAAAGTTTTAAAA-TCCTTA--AAAGAATCAGCCAAACTAGAATCTCT i chlSab2.chr6 I 1 C 0 s manLeu1.NW_012102454v1 891218 172 - 2385121 -------TTTCCGCAGCTTTCATGAAATGAGTT-GGCTTAATTTTTTGTGCTATATTAGCATAAGT--CATTGTAGTTTG-----GGGGTAAGCATAAACGAGATTGGTTGTTTAATG-AAAACGTGGGTAAAGat-aaaagcataaagttttagaa-tcctta--aaagaatcagccaaactagaatctct i manLeu1.NW_012102454v1 I 1 C 0 s colAng1.NW_012111697v1 2331183 172 + 4274983 -------TTTCCGCAGCTTTCATGAAATGAGTT-GGCTTTATTTTTTGTGCTATATTAGCATGAGT--CATTGTAGTTTG-----GGGGTAAGCATAAACAAGATTGGTTGTTTAATG-AAAACATGGGTAAAGAT-AAAAGCATAAAGTTTTAGAA-TCCTTA--AAAGAATCAGCCAAACTAGAATCTCT i colAng1.NW_012111697v1 I 1 C 0 s calJac3.chr22 28562389 170 + 49145316 -------TTTCTGCAGCCTTCATGAAATGAGTT-GGCTTTATTTTTTGTGCTGTATTAGCATGAGT--CATTATAGTTTG-----GGGGTAAGCATAAACTAGCT---TGGTTTAATG-AAAACATGGGTAAAGATAAAAATCATTAAGTTTTAGAA-TCCTTA--AAAGAATCAGCCAAACTAGAATCTCT i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5408506 172 + 8899380 -------TTTCTGCAGTCTTCATGAAATGAGTT-GGCTTTATTTTTTGTGCTGTATTAGCATGAGT--CATTGTAGTTTG-----GGGGTAAGCATAAACGAGCTTCGTTGTTTAATG-TAAACATGGGTAAAAAT-AAAATCATAAAGTTTTAGAA-TCCTTA--AAAGAATCAATCAAACTGGAATCTCT i saiBol1.JH378197 I 1 C 0 s cebCap1.NW_016107633v1 1613315 172 - 2680843 -------TTTCTGCAGCCTTCATTAAATTAGTT-GGCTTTATTTTTTGTGCTGTATTAGCATGAGT--CATTGTAGTTTG-----GGGGTAAGCATAAACGAGCTTGGTTGTTTAATG-AAAACATGAGTAAAGAT-AAAATCATAAAGTTTTAGAA-TCCTTA--AAAGAATCAGCCAAACTAGAATCTCT i cebCap1.NW_016107633v1 I 1 C 0 s aotNan1.NW_018505377v1 363494 171 - 4471408 -------TTTCTGCAGCCTTCATGAAATGAGTT-GGCTTTATTTTTTGTGCTGTATTAGCATGAGT--CATTGTAGTTTG-----GTGGTAAGCATAAACGAGCTTGGTTGTTTAATG-AAAACATG-GTAAAGAT-AAAATCATAAAGTTTTAGAA-TCCTTA--AAAGACTAAGCCAGACTAGAATCTCT i aotNan1.NW_018505377v1 I 1 C 0 s micMur3.chr22 3960508 172 - 30143674 -------TTTCAGCAGCCTTCATGAAATGAGTTAGGCTTTGTTCTTTGTGCTATATTGGCATGAGT--CATTACAGTTTT-----GGGGTGAGCTTAAGCAAACTTGATTGTTTAATG-AAAACA-GGGTAAGGAT-AGGATCATAGATTTTCAGAA-TCTGTA--AAAGAATCAGCCAAACTAGAACCTCT i micMur3.chr22 I 149 I 2901 s canFam3.chr1 4613387 166 - 122678785 -------TTCCAGCAGCCTTCATATAATGAGTT-GACTTTCTTGTTTGTGCTCTGTTGTCATAAAT--CATT--AATTTT-----GAGGTGAGCATGGGCAAGTCTGGTTGTTTAATG--AAACACAGGCA---GT-AGGATTGTAGATTTTAAGAA-CTTTCT--AAAATACCAGCCAAAACTATAGCTCT i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 338527 180 + 643850 GGTGCATCCGTTGCAGGCTTTCTATGGTAAGTT-GGCTTTACTTTGTGTGCTTCTTTGGCATGTACCACATAGTGATTTGCGATAAGGGTATGTATATGTAA-CCTGGTTGTATAATGAAAAACA---GTGAAGAT-AGGATCATATGTTTTTAGAACTCCTTAGGAAAAAATCATCCGAACTAGA------ i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e otoGar3.GL873654 5479767 315 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I a score=1323888.000000 s hg38.chr19_GL383574v1_alt 73381 133 + 155864 ACGCTACCACACTCACATTAGATGATAAGGAAACTAAGGACCCCAAGAAGTTAATTGTCATGATTGAG-----GTACAAGCTAACAAATCCAAAACT--CACTCTCTTGACTTGTGGCCTGA-TTTTCCTTAAGGGTAATA s panTro5.chr19 36141959 133 + 61309027 ACGCTACCACACTCACATTAGATGATAAGGAAACTAAGGACCCCAAGAAGTTAATTGTCATGATTGAG-----GTACAAGCTAACAAATCCAAAACT--CACTCTCTTGACTTGTGGCCTGA-TTTTCCTTAAGGGTAATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39888179 133 + 64411610 acgctaccacactcacattagatgataaggaaactaaggaccccaagaagttaattgtcatgattgag-----gtacaagctaACAAATCCAAAACT--CACTCTCTTGACTTGTGGCCTGA-TTTTCCTTAAGGGTAATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6305768 133 - 8369475 atgctaccatactcacattagatgataaggaaactaaggaccccaagaagttaattgtcatgattgag-----gtacaagctaACAAATCCAAAACT--CACTCTCTTGACTTGTGGCCTGA-TTTTCCTTAAGGGTAATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63898035 133 - 106955855 ccgctaccacactcacattagatgataaggaaactaaggaccccaagaagttaattgtcatgattgag-----gtacaagctaacaaatccaaaact--cactctcttgactTGTGGCCTGA-TTTTCCTTAAGAGTAATG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30209783 131 + 53671032 GCACTACCACACTCACATTAGATGATTAGGAGACTAAGGACCCCAAGAAGTTAATTGT-GTGATTGAG-----GTACAAGCTAACAAAGCC-AAACT--CACTCTCTTGACTTCTGGCCTGA-TTTTCCTTAAGGGTAATG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34663505 131 + 59248254 GCACTACCACACTCACATTAGATGATTAGGAGACTAAGGACCCCAAGAAGTTAATTGT-GTGATTGAG-----GTACAAGCTAACAAAGCC-AAACT--CACTCTCTTGACTTCTGGCCTGA-TTTTCCTTAAGGGTAATG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4530034 132 - 13342542 GCACTACCACACTCACAGTAGATGATTAGGAGACTAAGGACCCCAAGAAGTTAATTGT-GTGATTGAG-----GTACAAGCTAACAAAGCCAAAACT--CACTCTCTTGACTTCTGGCCTGA-TTTTCCTTAAGGGTAATG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5460261 132 + 7714307 GCACTACCACACTCACATTAGATGATTAGGAGACTAAGGACCCCAAGAAGTTAATTGT-GTGATTGAG-----GTACAAGCTAACAAAGCCAAAACT--CACTCTCTTGACTTCTGGCCTGA-TTTTCCTTAAGGGTAATG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29260096 128 + 50890351 GCACTACCACACTCACATTAGGTGATTAGGAGAC----GACCCCAAGAAGTTAATTGT-GTGATTGAG-----GTACAAGCTAACAAAGCCAAAACT--CACTCTCTTGACTTCTGGCCTGA-TTTTCCTTAAGGGTAATG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 891390 132 - 2385121 gcactaccacactcacattagatgattaggagactaaggaccccaagaagttaattgt-gtgattgag-----gtacaagctaacaaagccaaaact--cactctcttgacttctggcctgA-TTTTCCTTAAGGGTAATG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2331355 132 + 4274983 CCACTACCACATTCACATTAGATGATTAGGAGACTAAGGACCCCAAGAAGTTAATTGT-GTGATTGAG-----GTACAAGCTAACAAAGCCAAAACT--CACTCTCTTGACTTCTGGCCTGA-TTTTCCTTAAGGGTAATG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28562559 133 + 49145316 CCCCTACCATGCTTCCATTAGATgataaggaaactaaggaccccaagaagttaattctcatgattgag-----gtacaagctaacaaagccaaaact--cactctcttgacttctagcctga-ttttccttAAGGATAATG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5408678 133 + 8899380 CCCCTTCCACGCTCCCAGTCGATGATAAGGGAACTAAGGACCCCAAGAAGTTAATTCTCATGATTGAG-----GTACAACCTAGCAAAGCCAAAACT--CACTCTCTTGACTTCTGGCCTGA-TTTTCCTTAAGGATAATG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1613487 138 - 2680843 CCCCTACCACGCTCCCATTAGATGATAAGGGAACTAAGGACCCCAAGAAGTTAATTCTCATGATTGAGGTACAGTACAAGCTAACAAAGCCAAAACT--CACTCTCTTGACTTCTGGCCTGA-TTTTCCTTAAGGATAATG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 363665 133 - 4471408 CCCCTACCACGCTGCTATTAGATGATAAGGAAACTAAGGACCCCAAGAAGTTAATTCTCATGATTGAG-----GTACAAGCTAACAAAGCCAAAACT--CACTCTCTTGACTTCTGGCCTGA-TTTTCCTTAAGGATAATG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4613553 79 - 122678785 CTCTCACTGtacccccaacagatagt-aggaaaccaaggacccagagaggttaactctcttgatctga-----gtacaagctagt-------------------------------------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 338707 110 + 643850 ----------------------TGATTAGGAAACTAAGGACCCTGAGAGGTTGATTAC-TTGATCAGA-----TAACGAACTGATAGAGCCAAAACTGGAAATTTATTA---TCTGACCTCAGTTTTTCTTAAGGATAATA i dasNov3.JH563638 C 0 I 40 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e otoGar3.GL873654 5479767 315 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I a score=1227165.000000 s hg38.chr19_GL383574v1_alt 73514 122 + 155864 TTGTAAATATAggccagtgcaatggtgtacacatgtaataccagcattttgggaggccagggc---aggattgcttaagcccaggaattcaaggacagcatgggcaacataaggagtccctatct s panTro5.chr19 36142092 122 + 61309027 TTGTAAATATAggccagtgcaatggtgtacacatgtaataccagcattttgggaggccagggc---aggattgcttaagcccaggaattcaaggacagcatgggcaacataaggagtccgtatct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39888312 122 + 64411610 TTGTAAATATAggccagtgcaatggtgtacacatgtaataccagcattttgggaggccagggc---aggattgcttaagcccaggaattcaaggacagcatgggcaacataaggagtccgtatct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6305901 122 - 8369475 TTGTAAATATAggccagtgcaatggtgtacacatgtaataccagcattttgggaggccagggc---aggattgcttaagcccaggaattcaaggacagcatgggcaacataaggagtccctatct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63898168 122 - 106955855 TTGTAAATATAggccagtgcaatggtttacatgtgtaataccagcactttgggaggccagggc---aggattgcttaagcccaggaattcaaggtcagcatgggcaacataaggagtccctatct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30209914 125 + 53671032 TTGGAAATGTAggccagtgcaatggtttacacgtgtaataccagcactttgggaggccagggcaggaggattgcttaagcccaggaattcaaggtcagcatgggcaacataaggagtccctatct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34663636 125 + 59248254 TTGGAAATGTAggccagtgcaatggtttacacgtgtaataccagcactttgggaggccagggcaggaggattgcttaagcccaggaattcaaggtcagcatgggcaacataaggagtccctatct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4530166 125 - 13342542 TTGGAAATGTAGGCCAgtgcaatggtttacacgtgtaataccagcactttgggtggccagggcaggaggattgcttaagcccaggaattcaaggtcagcatgggcaacataaggagtccctatct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5460393 125 + 7714307 TTGGAAATGTAGGCCAgtgcaatggtttacacgtgtaataccagcattttgggaggccagggcaggaggattgcttaagcccaggaattcagggtcagcatgggcaacataaggagtccctatct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29260224 125 + 50890351 TTGGAAATGTAGGCCAGTTcaatggtttacatgtgtaataccagcactttgggaggccagggcaggaggattgcttaagcccaggaattcaaggtcagcatgggcaacataaggagtccctatct i chlSab2.chr6 C 0 I 6535 s manLeu1.NW_012102454v1 891522 125 - 2385121 TTGGAAATGTAGGCCAgtgcaatggtttacacgtgtaataccagcactttgggaggccagggcaggaggattgcttaagcccaggaattcaaggtcagcatgggcaacataaggagtccctatct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2331487 125 + 4274983 TTGGAAATGTAggccagtgcaatggtttacacgtgtaataccagcactttggggggccagggcaggaggattgcttaagcccaggaattcaaggtcagcatgggcaacataaggagtccctatct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28562692 125 + 49145316 TGGGAAATATAggccagtgcagtggtttacacatgtaatactagcactttgggaagttagggcaggaagattgcttaagcccaggaattcaaggtcagcatgggcaacataaggaatccctatct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5408811 125 + 8899380 TGGGAAATAAAGGCCAATgcagtggtttacacatgtaatactagcactttgggaagttagggcaggaagattgcttaagcccaagaattcaaggtcagcatgggcaacataaggaatccctatct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1613625 124 - 2680843 TGGGAAATATATACCAgtgcagtggtttacacatgtaatactagcactttgggaagttagggcaggaagattgcctaagcccaggaattcaaggtcagcatgggcaaga-aaagattccctatct i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 363798 125 - 4471408 TGGGAAATATAggccagtgcagtggtttacacatgtaatactagcactttgggaagttagggcaggaagattgcttaagcccaggaattcaaggtcagcatgggcaacataaggaatccctatct i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e dasNov3.JH563638 338817 40 + 643850 I e otoGar3.GL873654 5479767 315 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e canFam3.chr1 4613632 0 - 122678785 C a score=20055.000000 s hg38.chr19_GL383574v1_alt 73636 2 + 155864 ct s panTro5.chr19 36142214 2 + 61309027 ct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39888434 2 + 64411610 ct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306023 2 - 8369475 ct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63898290 2 - 106955855 ct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30210039 2 + 53671032 ct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34663761 2 + 59248254 ct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4530291 2 - 13342542 ct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5460518 2 + 7714307 ct i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 891647 2 - 2385121 ct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2331612 2 + 4274983 ct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28562817 2 + 49145316 ct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5408936 2 + 8899380 ct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1613749 2 - 2680843 ct i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 363923 2 - 4471408 ct i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e dasNov3.JH563638 338817 40 + 643850 I e otoGar3.GL873654 5479767 315 + 5549422 I e mm10.chr7 111091519 1541 - 145441459 I e chlSab2.chr6 29260349 6535 + 50890351 I e canFam3.chr1 4613632 0 - 122678785 C a score=32241.000000 s hg38.chr19_GL383574v1_alt 73638 5 + 155864 ataaa s panTro5.chr19 36142216 5 + 61309027 ataaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39888436 5 + 64411610 ataaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306025 5 - 8369475 ataaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63898292 5 - 106955855 ataac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30210041 5 + 53671032 ataaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34663763 5 + 59248254 ataaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4530293 5 - 13342542 ataaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5460520 5 + 7714307 ataaa i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 891649 5 - 2385121 ataaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2331614 5 + 4274983 ataaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28562819 5 + 49145316 actaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5408938 5 + 8899380 tctaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1613751 5 - 2680843 actaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 363925 5 - 4471408 actaa i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5480082 5 + 5549422 ataaa i otoGar3.GL873654 I 315 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e dasNov3.JH563638 338817 40 + 643850 I e mm10.chr7 111091519 1541 - 145441459 I e chlSab2.chr6 29260349 6535 + 50890351 I e canFam3.chr1 4613632 0 - 122678785 C a score=59707.000000 s hg38.chr19_GL383574v1_alt 73643 7 + 155864 aaagttt s panTro5.chr19 36142221 7 + 61309027 aaagttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39888441 7 + 64411610 aaagttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306030 7 - 8369475 aaagttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63898297 7 - 106955855 aaagttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30210046 7 + 53671032 aaagttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34663768 7 + 59248254 aaagttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4530298 7 - 13342542 aaagttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5460525 7 + 7714307 aaagttt i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 891654 7 - 2385121 aaagttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2331619 7 + 4274983 aaagttt i colAng1.NW_012111697v1 C 0 I 310 s calJac3.chr22 28562824 7 + 49145316 acagttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5408943 7 + 8899380 acagttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1613756 7 - 2680843 acagttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 363930 7 - 4471408 acagttt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5480087 7 + 5549422 taaacta i otoGar3.GL873654 C 0 I 3 s canFam3.chr1 4613632 7 - 122678785 aaagcca i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e dasNov3.JH563638 338817 40 + 643850 I e mm10.chr7 111091519 1541 - 145441459 I e chlSab2.chr6 29260349 6535 + 50890351 I a score=1504224.000000 s hg38.chr19_GL383574v1_alt 73650 179 + 155864 aaaaattagctggagtggtggcacatgcctgtagtcccagctactcaggaggctaaggcaggaggatcagttgaacctgggaggtcaaggctgcagtgagccatgatcgcaccactgcactccagcctgggtgacagagcgaggc-ctgtctcaaaaaaaaaaaagaaaagaaagaaaTA s panTro5.chr19 36142228 179 + 61309027 aaaaattaactggagtggtggcacatgcctgtagtcccagctactcaggaggctaaggcgggaggatcacttgaacctgggaggtcaaggctgcagtgagccatgatcgcaccactgcactccaacctgggtgacagagcgaggc-ctgtctcaaaaaaaaaaaagaaaagaaagaaaTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39888448 178 + 64411610 aaaaattaactggagtggtggcacatgcctgtagtcccagctactcaggaggctaaggcgggaggatcacttgaacctgggaggtcaaggctgcagtgagccatgatcgcaccactgcactccagcctgggtgacagagcgaggc-ctgtctcaaaaaaaaaaaag-aaagaaagaaaTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306037 179 - 8369475 aaaaattcgctggagtggtggcacatgcctgtagtcccagctactcaggaggctaaggcgggaggatcacttgaacctgggaggtcaaggctgcagtgagccatgatcgcaccactgcactccagcctgggtgacagagcgaggc-ctgtctcaaaaaaaaaaaagaaaagaaagaaaTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63898304 179 - 106955855 aaaaattagctggagtggtggcacatgcctgtagtcccagctactcaggaggctaaggcgggaggatcacttgaacctgagaggtcaaagctgcaatgagccatgatcgcaccactgcactccagcctgggtgacagagcgagac-ctgtctcaaaaaaaaaaaagaaaagaaagaaaTA i nomLeu3.chr10 C 0 I 308 s rheMac8.chr19 30210053 179 + 53671032 aaaaattagctggagtggtggcacatgcctgtagtcccagctactcaggaggctaaggcgggaggatcacttgaacctgggaggtcaaggctgcaacgagccatgattgcaccactgcactccagcctgggtgacagagcaagac-cggtctcaaaaaaaaaaaaagaaagaaagaaaTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34663775 179 + 59248254 aaaaattagctggagtggtggcacatgcctgtagtcccagctactcaggaggctaaggcgggaggatcacttgaacctgggaggtcaaggctgcaacgagccatgattgcaccactgcactccagcctgggtgacagagcaagac-cggtctcaaaaaaaaaaaaaaaaagaaagaaaTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4530305 179 - 13342542 aaaaattagctggagtggtggcacatgcctgtagtcccagctactcaggaggctaaggcgggaggatcacttgaacctgggaggtcaaggctgcaacgagccatgattgcaccactgcactccagcctgggtgacagagcaagac-cggtctcaaaaaaaaaaaaaaaaagaaagaaaTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5460532 176 + 7714307 aaaaattagctggagtggtggcacattcctgtagtcccagctactcaggaggctaaggcgggaggatcacttgaacctgggaggtcaaggctgcaacgagccatgatcgcaccactgcactccagcctgggtgacagagcaagac-cggtctcaaaaaaaaaaa---aaagaaagaaaTA i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 891661 174 - 2385121 aaaaattagctggagtggtggcacattcctgtagtcccagctactcaggaggctaaggcgggaggatcacttgaacctgggaggtcaaggctgcaacgagccatgatcgcaccactgcactccagcctgggtgacagagcaagac-cggtctcaaaaaaaaa-----aaagaaagaaaTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2331936 173 + 4274983 aaaaattagctggagtggtggcacatgcctgtagtcccagctactcaggaggctaaggcgggaggatcacttgaacctgggaggtcaaggctgcaacaagccatgatcacaccactgcactccagcctgggtgacagagcaagtc-cggtctcaaaaaaaa------aaagaaagaaaTA i colAng1.NW_012111697v1 I 310 C 0 s calJac3.chr22 28562831 170 + 49145316 aaaaaatagctggagtggtgggacgtgcctgtagttccagctattcagggggctaaggcaggaggatcacttgaatctgggaggtcagggctgcaacaagccatgatcacaccactgcactgtagccc-agtgacagagcgagac-ctgtttcaaaaaaaaga--------aaagaaaTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5408950 174 + 8899380 aaaaaatagctggagtggtgggacgtgcctgtagttccagctattcatggggctaagggaggaggatcacttgaatctgggaggtcggggctgcaacacaccatgatcacaccactgcactctagcct-ggtgacagagcgagac-ctgtctcaaaaaaaaga----aaagaaagaaaTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1613763 167 - 2680843 aaaaaatagctggagtggtgggatgtgcctgt------agctattca-ggggctaaggcaggaggatcacttgaatctgggaggtctgggctgcaacaagccatgatcacaccactgcactctagccc-agtgacagagcgagac-ctgtctcaaaaaaaaga----aaagaaagaaaTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 363937 174 - 4471408 aaaaaatagctggagtggtgggacgtgcctgtagttccatctattcagggggctaaggcaggaagatcacttgaatctgggaggtcagggctgcaacaagccatgatcacaccactgtactctagccc-ggtgacagagcgagac-ctgtctcgaaaaaaaga----aaagaaagaaaTA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5480097 168 + 5549422 taaaataaacagacattgtggcatgcacctttagttccagctacttgggaggctgaggcaagagaatctcttgagcccaagagtttgaggttgctgtgagctgtga---caccacagcactctatcaagggcgacatagtgaaactttgtctcaattaaaaaagaGTGAAG--------- i otoGar3.GL873654 I 3 C 0 s canFam3.chr1 4613639 50 - 122678785 aaaacttaact---------------------------------------------------------------------------------------------------ctcattgc--------------------------c-cagttttcctTAAGAAT----AATGTTAGAAACA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e dasNov3.JH563638 338817 40 + 643850 I e mm10.chr7 111091519 1541 - 145441459 I e chlSab2.chr6 29260349 6535 + 50890351 I a score=115074.000000 s hg38.chr19_GL383574v1_alt 73829 14 + 155864 TAACCTTATGGTAA s panTro5.chr19 36142407 14 + 61309027 TAACCTTATGGTAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39888626 14 + 64411610 TAACCTTATGGTAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306216 14 - 8369475 TAACCTTATGGTAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63898791 14 - 106955855 TAACCTTATGGTAA i nomLeu3.chr10 I 308 C 0 s rheMac8.chr19 30210232 14 + 53671032 CAAACTTACGGTAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34663954 14 + 59248254 CAAACTTACGGTAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4530484 14 - 13342542 CAAACTTACGGTAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5460708 14 + 7714307 CAAACTTACGGTAA i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 891835 14 - 2385121 CAAACTTACGGTAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2332109 14 + 4274983 CAAACTTACGGTAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28563001 14 + 49145316 TAAACTTATCGTAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5409124 14 + 8899380 TAAACTTATAGTAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1613930 14 - 2680843 TAAACTTACAGTAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 364111 14 - 4471408 TAAACTTACAGTAA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4613689 14 - 122678785 TAAACTTGTGCTGA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e dasNov3.JH563638 338817 40 + 643850 I e otoGar3.GL873654 5480265 0 + 5549422 C e mm10.chr7 111091519 1541 - 145441459 I e chlSab2.chr6 29260349 6535 + 50890351 I a score=152989.000000 s hg38.chr19_GL383574v1_alt 73843 37 + 155864 GTTTGGTTGTATGGTGTTTTCCCCCTC--------CCACCGCCCA s panTro5.chr19 36142421 37 + 61309027 GTTTGGTTGTATGGTGTTTCCCCCCTC--------CCACCGCCCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39888640 36 + 64411610 GTTTGGTTGTATGGTGTTTCCCCCCT---------CCACCGCCCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306230 37 - 8369475 GTTTGGTTGTATGGTGTTTCCCCCCTC--------CCACCGCCCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63898805 29 - 106955855 GTTTGGTTGCATGGTGTTCCCCACC----------------CCCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30210246 45 + 53671032 GTTTGGTTTTATGGTGTTTCCCACCCCTTTCCCTTCCCCCGCCCC i rheMac8.chr19 C 0 I 5 s macFas5.chr19 34663968 45 + 59248254 GTTTGGTTTTATGGTGTTTCCCACCCCTTTCCCGTCCCCCGCCCC i macFas5.chr19 C 0 I 5 s macNem1.NW_012011689v1 4530498 45 - 13342542 GTTTGGTTTTATGGTGTGTCCCACCCCTTTCCCGTCCCCCGCCCC i macNem1.NW_012011689v1 C 0 I 5 s cerAty1.NW_012005268v1 5460722 45 + 7714307 GTTTGGTTTTATGGTGTTTCCCACCCCTTTCCCGTCCCCCGCCCC i cerAty1.NW_012005268v1 C 0 I 5 s manLeu1.NW_012102454v1 891849 45 - 2385121 GTTTGGTTTTATGGTGTTTCCCACCCCTTTCCCGTCCCCCGCCCC i manLeu1.NW_012102454v1 C 0 I 5 s colAng1.NW_012111697v1 2332123 45 + 4274983 GTTTGGTTCTATGGTGTTTCCCACCCCTTTCCCGTCCCCCGCCCC i colAng1.NW_012111697v1 C 0 I 5 s calJac3.chr22 28563015 29 + 49145316 GTTTGGTTTTATGGTGCTTC---------------CCCCACCCC- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5409138 33 + 8899380 GTTTGGTTTTATGGTGCTTCCTTG-----------CCCCGCTGC- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1613944 31 - 2680843 GTTTGGTTTTATGGTGCTTTTT-------------TCCCCCCTC- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 364125 32 - 4471408 GTTTGGTTTTATGGTGCTTTTTT------------CCCCCCCTC- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5480265 10 + 5549422 -----------------------------------CCACCTCCTA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4613703 20 - 122678785 GCTTAGTGCTGGGGTGTTTT------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 338857 19 + 643850 -TTTTGGTTTTTGGTGTTTT------------------------- i dasNov3.JH563638 I 40 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e mm10.chr7 111091519 1541 - 145441459 I e chlSab2.chr6 29260349 6535 + 50890351 I a score=144909.000000 s hg38.chr19_GL383574v1_alt 73880 14 + 155864 TTCTTTTTTGAGGT s panTro5.chr19 36142458 14 + 61309027 TTCTTTTTTGAGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39888676 12 + 64411610 TTC--TTTTGAGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306267 14 - 8369475 TTCTTTTTTGAGGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63898834 14 - 106955855 TTCTTTTTTGAGAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30210296 14 + 53671032 TTCTTTTTTGAGGT i rheMac8.chr19 I 5 C 0 s macFas5.chr19 34664018 14 + 59248254 TTCTTTTTTGAGGT i macFas5.chr19 I 5 C 0 s macNem1.NW_012011689v1 4530548 14 - 13342542 TTCTTTTTTGAGGT i macNem1.NW_012011689v1 I 5 C 0 s cerAty1.NW_012005268v1 5460772 14 + 7714307 TTCTTTTTTGAGGT i cerAty1.NW_012005268v1 I 5 C 0 s chlSab2.chr6 29266884 14 + 50890351 TTCTTTTTTGAGGT i chlSab2.chr6 I 6535 C 0 s manLeu1.NW_012102454v1 891899 14 - 2385121 TTCTTTTTTGAGGT i manLeu1.NW_012102454v1 I 5 C 0 s colAng1.NW_012111697v1 2332173 14 + 4274983 TTCTTTTTTGAGGT i colAng1.NW_012111697v1 I 5 C 0 s calJac3.chr22 28563044 14 + 49145316 TTCTTTTTTGAGGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5409171 14 + 8899380 TGCTTTTTTGAGGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1613975 14 - 2680843 TTCTTTTTTGAGGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 364157 14 - 4471408 TTCTTTTTTGAGGT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5480275 11 + 5549422 ---TTCTGTACACT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4613723 8 - 122678785 ------GTGGAGAT i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 338876 8 + 643850 ------TTTGAGGT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e mm10.chr7 111091519 1541 - 145441459 I a score=1669677.000000 s hg38.chr19_GL383574v1_alt 73894 145 + 155864 GAGAATGGAAATCAGGACTA--GCAATAATAATGT---AACCAGCTCCTG--------TTTTATATGCTGCTGTCAGGGAGGTTAAGCCACCATGGTGGGTGATAAAAAATCACATC---------TGTGTTTCCTCAGATGGGGTTCAAAGACAACAAGGTGTCTG s panTro5.chr19 36142472 144 + 61309027 GAGAATGGAAATCAGGACTA--GCAATAATAATGT---AACCAGCTCCTG--------TTTTATATGCTGCTGTCAGGGAGGTTAAGCCACCATGGTGGGTGAT-AAAAATCACATC---------TGTGTTTCCTCAGATGGGGTCCAAAGACAACAAGTTGTCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39888688 140 + 64411610 GAGA--TGGAATCAG--CTA--GCAATAATAATGT---AACCAGCTCCTG--------TTTTATATGCTGCTGTCAGGGAGGTTAAGCCACCATGGTGGGTGAT-AAAAATCACATC---------TGTGTTTCCTCAGATGGGGTCCAAAGACAACAAGGTGTCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306281 144 - 8369475 GAGAATGGAAATCAGGACTA--GCAATAATAATGT---AACCAGCTCCTG--------TTTTATATGCTGCTGTCAGGGAGGTTAAGCCACCATGGTGGGTGAT-AAAGATCACATC---------TGTGTTTCCTCAGATGGGGTCCAAAGACAACAAGGTGTCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63898848 144 - 106955855 GAGAATGGAGATCAGGACTA--GCAATAATAATGT---AACCAGCTCCTG--------TTTTACATGCTGCTGTCAGGGAGGTTAAGCCACCATGGTGGGTTAT-AAAGATCCCATC---------TGTGTTTCCTCAGATGGGGTCCAAAGACAACAAGGTGTCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30210310 144 + 53671032 GGGAATGGAGATCAGGACTA--GGATTAATAATGT---AACTAGCTCCTG--------TTTTATATGCTGCTGTCAGGGAGGTTAAGCCACCATGGTGGGTGAT-AAAGATTGCATC---------TATGTTTCTTCAGATGGGGTCCAGAGACAACAAAGTGTCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34664032 144 + 59248254 GGGAATGGAGATCAGGACTA--GGATTAATAATGT---AACTAGCTCCTG--------TTTTATATGCTGCTGTCAGGGAGGTTAAGCCACCATGGTGGGTGAT-AAAGATTGCATC---------TATGTTTCTTCAGATGGGGTCCAGAGACAACAAAGTGTCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4530562 144 - 13342542 GGGAATGGAGATCAGGACTA--GGATTAATAATGT---AACTAGCTCCTG--------TTTTATATGCTGCTGTCAGGGAGGTTAAGCCACCATGGTGGGTGAT-AAAGATTGCATC---------TATGTTTCTTCAGATGGGGTCCAGAGACAACAAAGTGTCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5460786 144 + 7714307 GGGAATGGAGATCAGGACTA--GAATTAATAATGT---AACTAGCTCCTG--------TTTTATATGCTGCTGTCAGGGAGGTTAAGCCACCATGGTGGGTGAT-AAAGATTGCATC---------TGTGTTTCTTCAGATGGGGTCCAGAGACAACAAAGTGTCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29266898 144 + 50890351 GGGAATGGAGATCAGGACTA--GGATTAATAATGT---AACTAGCTCCTG--------TTTTATATGCTGCTGTCAGGGAGGTAAAGCCACCATGGTGGGTGAT-AAAGATTGCATC---------TGTGTTTCTTCAGATGGGGTCCAGAGACAACAAAGTGTCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 891913 144 - 2385121 GGGAATGGAGATCAGGACTA--GGATTAATAATGT---AACTAGCTCCTG--------TTTTATATGCTGCTGTCAGGGAGGTTAAGCCACCATGGTGGGTGAT-AAAGATTGCATC---------TGTGTTTCTTCAGATGGGGTCCAGAGACAACAAAGTGTCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2332187 144 + 4274983 GGGAATGGAGATCAGGACTA--GTAATAATAATGT---AACTAGCTCCTG--------TTTTATATGCTGCTGTCAGGGAGGTTAAGCCACCATGGTGGGTGAT-AAAGATTGCATC---------TGTGTTTCTTCAGATGGGGTCCAAAGACAACAAGGTGTCTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28563058 144 + 49145316 GGGAATGGAGATCAGGACTA--GGAATAATAATGT---AACCAGCTCCTG--------TTTTGTATGCTGCTGTCAGTGAGGTTAAGCCACCATGGTGGGTGAT-AAAGATTACATC---------TGTGTTTCTTTAGATGGGGTCCAAAGACAATAAGGTGTCTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5409185 144 + 8899380 GGGAATGGAGATCAGGACTA--GGAATAATAATGT---AACGAGCTCCTG--------TTTTGTATGCTGCTGTCAGTGAGGTTAAGTCACCATGGTGAGTGAT-AAAGATTGCATC---------TGTGTTTCTTCAGATGGGGTCCAAAGACAACAAGGTATCTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1613989 144 - 2680843 GGGAATGGAAATCAGGACTA--GGAATAATAATGT---AACCAGCTCCTG--------TTATGTATGCTGCTGTCAGTGAGGTTAAGCCACCATGGTGGGTGAT-AAAGATTGCATC---------TGTGTTTCTTCAGATGGGGTCCAAAGACATCAAGGTGTCTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 364171 144 - 4471408 GGGAATGGAGATCAGGACTA--GGAATAATAATGT---AACCAGCTCCTG--------TTTTGTATGCTGCTGTCAGTGAGGTTAAGCCACCCTGGTGGGTGAT-AAAGATTGCATC---------TGTGTTTCTTCAGATGGGGTCCAAAGACAACAAGGTGTCTG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5480286 114 + 5549422 G------------ATGACCA--CCAGTAAGAGTGTGGGAGCTGGCT------------------GTGCTCTTGTAGCTGGGGATACAGTGCCCTG------CAT------TTTAATT---------TCTGTTTCTTCAGAGAGGGTCCAGAGATAGTGAGGTATCTG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111093060 140 - 145441459 GAAAGGGGATGTCTGGATTG--GGA-TATGAGTGT---AGTCAACTTCTT--------TCTCATATGCTACTGTTAAGTAGTTTCAGTGACTGTGGTGGGTAAT-ACATTTGAGTCT---------TATATTCAGTCAGA---GATCCTGAGACAATGAGGAATTTG i mm10.chr7 I 1541 I 179 s canFam3.chr1 4613734 158 - 122678785 GGACAAGGAGATCAGGTTGGGTGTAATAAAAGTAT---AGTCAGCTGCTGACTATACTTTTTATATGCTGCTGTTAAGGA-----AGCTACCATGGGAAGTGAG-ACAAATTACCTTCCATTTGAGTCTATTTCTTCAGATAGGGTCCAGAGACAAAGAGATAACCA i canFam3.chr1 I 3 I 1 s dasNov3.JH563638 338884 135 + 643850 ------------GGGGGGCG--TGGATAAGAATGT---AGCCAGCAGCTA--------TTTTATTTGCTGCTGCCAAGGA------GTTACCATGGTGGGTGAG-ACAGATTGCCTTGCATTTGAGTCTTTTGCTTCAGAGATGTTCCAGAGACAATGAGGTATCCA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I a score=624470.000000 s hg38.chr19_GL383574v1_alt 74039 49 + 155864 -AA-----TG------ACTCAGCATAATG-ctctctct-cct-ctccc-cctttcattttctcct s panTro5.chr19 36142616 49 + 61309027 -AA-----TG------ACTCAGCATAATG-ctctctct-cct-ctccc-cctttcattttctcct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39888828 51 + 64411610 -AA-----TG------ACTCAGCATAATGtctctctct-cctcctccc-cctttcattttctcct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306425 47 - 8369475 -AA-----TG------ACTCAGCATAATG---Ctctct-cct-ctccc-cctttcattttctcct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63898992 47 - 106955855 -AA-----TG------ACTCAGCATAATG-ctctctct-cct-ctccc-cctttcattttctc-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30210454 49 + 53671032 -AA-----TG------ACTCAGCATAATG-Ttctctct-cct-ctccc-cctttcattttctcct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34664176 49 + 59248254 -AA-----TG------ACTCAGCATAATG-Ttctctct-cct-ctccc-cctttcattttctcct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4530706 49 - 13342542 -AA-----TG------ACTCAGCATAATG-ttctctct-cct-ctccc-cctttcattttctcct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5460930 49 + 7714307 -AA-----TG------ACTCAGCATAATG-Ttctctct-cct-ctccc-cctttcattttctcct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29267042 49 + 50890351 -AA-----TG------ACTCAGCATAATG-Ttctctct-cct-ctccc-cctttcattttctcct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 892057 49 - 2385121 -AA-----TG------ACTCAGCATAATG-ttctctct-cct-ctccc-cctttcattttctcct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2332331 49 + 4274983 -AA-----TG------ACTCAGCATAATG-Ttctctct-cct-ctccc-cctttcatattctcct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28563202 49 + 49145316 -AA-----TG------ACTCAGCGTGATA-CTCTCTCT-CCT-CTCCC-CCTTTCATTTTCTCCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5409329 49 + 8899380 -AA-----TG------ACTCAGCATGATT-CTCTCTCT-CCT-CTCCC-CCTTTCATTTTCTCCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1614133 49 - 2680843 -AA-----TG------ACTCAGCATGATA-TTCTCTTT-CCT-CTCCC-CCTTTCATTTTCTCCT i cebCap1.NW_016107633v1 C 0 M 1330 s aotNan1.NW_018505377v1 364315 49 - 4471408 -AA-----TG------ACTCAGCATGATA-ctctctct-cct-ctccc-cctttcattttctcct i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5480400 60 + 5549422 -AAATGACTGTAGGATACTCAATATGACA-CCGTGTTTACCT-CTCCTGCCTTTTATTTTCTC-- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111093379 36 - 145441459 -AA-----TG------ACTCA---------Gtctcttt-c---cttcc-ccttttattttct--- i mm10.chr7 I 179 C 0 s canFam3.chr1 4613893 50 - 122678785 -AA-----TG------ACTCAGCATGGTA-ctctctctccct-ttccc-ccttttatttcctcct i canFam3.chr1 I 1 I 22 s dasNov3.JH563638 339019 51 + 643850 AAA-----TG------ACTCAGCATGGTA-ctctctctccct-cccct-tcttttattttctttc i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I a score=1382335.000000 s hg38.chr19_GL383574v1_alt 74088 130 + 155864 ttctccctctcc-----tgtcccca----tctctttc------------------------tcttttttttttttttttttttttttACCTTTCAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGATTGATCGTACTGCTTTCTGAAAGGT--------AAAAAAAA s panTro5.chr19 36142665 122 + 61309027 ttctccctctcc-----tgtccccg----tctctttc------------------------tc----------ttttttttttttttacctttcAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGATTGATCGTACTGCTTTCTGAAAGGT------AAAAAAAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39888879 124 + 64411610 ttctccctctcc-----tgtccccg----tctctttc------------------------tt--------ctttttttttttttttacctttcAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGATTGATCGTACTGCTTTCTGAAAGGT------AAAAAAAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306472 118 - 8369475 ttctccctctcc-----tgtccccg----tctctttc------------------------tc------------tttttttttTTTACCTTTCAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGATTGATCGTACTGCTTTCTGAAAGGT--------AAAAAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63899039 125 - 106955855 --ctctctctcc-----tgtctccc----tgtctttt------------------------tt---tttttttttttttttttttttACCTTTCAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGATTGATCGTACTGCTTTCTGAAAGGT--------AAAAAAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30210503 121 + 53671032 ttctctctctcc-----tgtccccg----tctctttc------------------------------------tttttttttttTTTACCTTTCAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGACTGATCGTACTGCTTTCTGAAAGGT-----AAAAAAAAAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34664225 124 + 59248254 ttctctctctcc-----tgtccccg----tctctttc------------------------------------tttttttttttTTTACCTTTCAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGACTGATCGTACTGCTTTCTGAAAGGT--AAAAAAAAAAAAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4530755 126 - 13342542 ttctctctctcc-----tgtccccg----tctctttc-------------------------t----------ttttttttttttttACCTTTCAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGACTGATCGTACTGCTTTCTGAAAGGT-aaaaaaaaaaaaaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5460979 124 + 7714307 ttctctctctcc-----tgtccccg----tctctttc-------------------------------------tttttttttttTTACCTTTCAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGACTGATCGTACTGCTTTCTGAAAGGT-aaaaaaaaaaaaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29267091 129 + 50890351 ttctctctctcC-----TGTCCCCGtttttttttttt------------------------tt----------ttttttttttttttACCTTTCAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGACTGATCGTACTGCTTTCTGAAAGGT---AAAAAAAAAAAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 892106 127 - 2385121 ttctctctctcc-----tgtccccg----tctctttc------------------------tt----------ttttttttttttttACCTTTCAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGACTGATCGTACTGCTTTCTGAAAGGT-aaaaaaaaaaaaaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2332380 146 + 4274983 ttctctctctcc-----tgtcccca----tctctttc------tttttttttttttttttttt----------ttttttttttttttACCTTTCAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGACTGATCGTACTGCTTTCTGAAAGGTaaaaaaaaaaaaaaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28563251 137 + 49145316 GTCTCttttttt-----c-----------tttctttcttttttttgttgtgttttttttttgt----------ttttttttttttttACCTTTCAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGATTGATCGTACTGCTTTCTGAAAGGT--------AAAAAAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5409378 111 + 8899380 Gtctc--tttct-----c-----------tttctttc-------------------------t----------ttctttttttttttACCTTTCAGAAAACCACAGCTTTTGGACCCCTAAA--AGGTCTGGATTGATCATACTGCTTTCTGAAAGGT--------AAAAAAAA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 364364 112 - 4471408 gtctctttcttt-----t-----------tttttttc-------------------------t----------tttttttttttttAACCTTTCAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGATTGATCGTACTGCTTTCTGAAAGGT--------aaaaaaaa i aotNan1.NW_018505377v1 C 0 I 350 s otoGar3.GL873654 5480460 124 + 5549422 TTCTCCCTTCCCCCACTTTTTTCCC----CCTCTATC-------------------------T----------CTTTTTTTTTTTTTACCTTTCAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGATTGATCGTACAGCTTTCTGAAAGGT--------AAAAAAAA i otoGar3.GL873654 C 0 I 2 s mm10.chr7 111093415 137 - 145441459 -tctccctccct-----taccccc-----tttctctc-------------cctgtctttctcc----------tatctttttttttAACCTTTCAGAAAACCACGGCTTTTGGA-CCCTAAA--AGGTCTGGATTGGTCATACTGCTTTCTGAAAGGTAAAAAAAGAAAAGAAA i mm10.chr7 C 0 C 0 s canFam3.chr1 4613965 133 - 122678785 ctctccccctcc-----cttctctc----cctctctc-------------tTTTTTTTTTTTT----------GCTTTCTTTTTTTTACCTTTCAGAAAACCACAGCTTTTGGA-CCCTAAAATAGGTCTGGATTGATCGTACAACTTTCTGAAAGGT--------AAAAAAAA i canFam3.chr1 I 22 C 0 s dasNov3.JH563638 339070 129 + 643850 ttttctccctcc-----tcttcctt----tcccccac---------------ctcccacctct----------ctttttttttttttacctttcAGAAAACCACAGCTTTTGGA-CCCTAAA--AGGTCTGGATCAATCGTACAGATTTCTGAAAGGT--------ACAAAGAA i dasNov3.JH563638 C 0 I 6 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e cebCap1.NW_016107633v1 1614182 1330 - 2680843 M a score=376700.000000 s hg38.chr19_GL383574v1_alt 74218 36 + 155864 CAA------ATACTTTGGGAGGTGTGAAGGTTGGCTTTGTGG s panTro5.chr19 36142787 36 + 61309027 CAA------ATACTTTGGGACGTGTGAAGGTTGGCTTTGTGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39889003 36 + 64411610 CAA------ATACTTTGGGACGTGTGAAGGTTGGCTTTGTGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306590 36 - 8369475 CAA------ATACTTTGGGAGGTGTGAAGGTTGGCTTTGTGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63899164 36 - 106955855 CAA------ATACTTTGGGAGGTGTGAAGGTTGGCTTTGTGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30210624 36 + 53671032 CAA------ATACCTTGGGAGGTGTGAAGGTTGGCTTTGTGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34664349 36 + 59248254 CAA------ATACCTTGGGAGGTATGAAGGTTGGCTTTGTGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4530881 36 - 13342542 caa------aTACCTTGGGAGGTGTGAAGGTTGGCTTTGTGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5461103 36 + 7714307 caa------aTACCTTGGGAGGTGTGAAGGTTGGCTTTGTGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29267220 36 + 50890351 CAA------ATACCTTGGGAGGTGTGAAGGTTGGCTTTGTGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 892233 36 - 2385121 caa------aTACCTTGGGAGGTGTGAAGGTTGGCTTTGTGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2332526 36 + 4274983 caa------aTACCTTGGGAGGTGTGAAGGTTGGCTTTGTGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28563388 41 + 49145316 -AAAAACAGATACATTGGGAGGTGTGAAAGTTGGCTTTGGTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5409489 35 + 8899380 -AA------ATACATTGGGAGGTGTGAAAGTTGCCTTTGGTG i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5480586 36 + 5549422 TAA------ATAAATTGGGAGATGTGAAGGTTGGCTTTGGTG i otoGar3.GL873654 I 2 I 1 s mm10.chr7 111093552 35 - 145441459 GAA------AGAAATTGGGAGGTGTGAAGGTTGGTTTGGTG- i mm10.chr7 C 0 C 0 s canFam3.chr1 4614098 32 - 122678785 -AA------AT---TCGGGGCATGTGAAAGTTGGCTTTGGTG i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 339205 36 + 643850 TAA------ATAAATTGGGGGGTATGAAGGTTGCCTTGGAGA i dasNov3.JH563638 I 6 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e aotNan1.NW_018505377v1 364476 350 - 4471408 I e cebCap1.NW_016107633v1 1614182 1330 - 2680843 M a score=370912.000000 s hg38.chr19_GL383574v1_alt 74254 36 + 155864 ----GGGAC-----AGCAGGTTCATCTTGTAGCTCATTGCT---------GTCA------ s panTro5.chr19 36142823 36 + 61309027 ----GGGAC-----AGCAGGTTCATCTTGTAGCTCATTGCT---------GTCA------ i panTro5.chr19 C 0 C 0 s panPan2.chr19 39889039 36 + 64411610 ----GGGAC-----AGCAGGTTCATCTTGTAGCTCATTGCT---------GTCA------ i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306626 36 - 8369475 ----GGGAC-----AGCAGGTTCATCTTGTAGCTCATTGCT---------GTCA------ i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63899200 36 - 106955855 ----GGGAC-----AGCAGGTTCATCTTTTAGCTCATTGCT---------GTCA------ i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30210660 36 + 53671032 ----GGGAC-----AGCAGGTTCATCTTTTAGCTCATTGCT---------GTCA------ i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34664385 36 + 59248254 ----GGGAC-----AGCAGGTTCATCTTTTAGCTCATTGCT---------GTCA------ i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4530917 36 - 13342542 ----GGGAC-----AGCAGGTTCATCTTTTAGCTCATTGCT---------GTCA------ i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5461139 36 + 7714307 ----GGGAC-----AGCAGGTTCATCTTTTAGCTCATTGCT---------GTCA------ i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29267256 36 + 50890351 ----GGGAC-----AGCAGGTTCATCTTTTAGCTCATTGCT---------GTCA------ i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 892269 36 - 2385121 ----GGGAC-----AGCAGGTTCATCTTTTAGCTCATTGCT---------GTCA------ i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2332562 36 + 4274983 ----GGGAC-----AGCAGGTTCATCTTTTAGCTCATTGCT---------GTCA------ i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28563429 36 + 49145316 ----GGGAC-----AGCGGGTTCATCTTTGAGCTCATTGCT---------GTCA------ i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5409524 36 + 8899380 ----GGGAC-----AGCGGGTTCATCTTTTAGCTCATTGCT---------GTCA------ i saiBol1.JH378197 C 0 I 190 s aotNan1.NW_018505377v1 364826 36 - 4471408 ----GGGAC-----AGCAGGTTCATCTTTTAGCTCATTGCT---------GTCA------ i aotNan1.NW_018505377v1 I 350 C 0 s otoGar3.GL873654 5480623 29 + 5549422 ----GGAAC-----AGCAGGTTCATGTTTTAGTTTATT---------------------- i otoGar3.GL873654 I 1 I 1 s mm10.chr7 111093587 43 - 145441459 ----GGGAC-----AGAGGGCT-ATCTT-TAGTTTGGTACTTGTTTCTAGACCA------ i mm10.chr7 C 0 C 0 s canFam3.chr1 4614133 40 - 122678785 ----GGGACTATGGGGTGGGATTATCTT-CAGTTTATTTCT---------TTCT------ i canFam3.chr1 I 3 I 6 s dasNov3.JH563638 339241 40 + 643850 AGGAGGGGC-----AG-----TCATCCTCTA-CTCATTTCT---------TTCTGTACCA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e cebCap1.NW_016107633v1 1614182 1330 - 2680843 M a score=1586543.000000 s hg38.chr19_GL383574v1_alt 74290 148 + 155864 ACTTATGCCATACCATATGTATTTCAGTTTAATAACGGGGTGC-AAATGTTTTGGTGTTGTATACACAGATGAAGTTAAGTCTC------ACCTAGGAAAT-GTCTG-TTTCTAACAGTTGGGGTGAGAATCAGCAGTAAAAACCAGGTATATGGTA s panTro5.chr19 36142859 148 + 61309027 ACTTATGCCATACCATATGTATTTCAGTTTAATAACGGGGTGC-AAATGTTTTGGTGTCGTATACACAGATGAAGTTAAGTCTC------ACCTAGGAAAT-GTCTG-TTTCTAACAGCTGGGGTGAGAATCAGCAGTGAAAACCAGGTATATGGTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39889075 148 + 64411610 ACTTATGCCATACCATATGTATTTCAGTTTAATAACGGGGTGC-AAATGTTTTGGTGTCGTATACACAGATGAAGTTAAGTCTC------ACCTAGGAAAT-GTCTG-TTTCTAACAGCTGGAGTGAGAATCAGCAGTAAAAACCAGGTATATGGTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306662 148 - 8369475 ACTTATGCCATACCATATGTATTTCAGTTTAATAACAGAGTGC-AAATGTTTTGGTGTTGTATACACAGATGAAGTTAAGTCTC------ACCTAGGAAAT-GTCTG-TTTCTAACAGTTGGGGTGAGAATCGGCAGTAAAAACCAGGTATATGGTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63899236 143 - 106955855 ACTTATGCCATACCATATGTATTTCAATTTAATAACAGGGTGC-AAATGTTTTGGTGTT-----CACAGATGAAGTTAAGTCTC------ACCTAGGAAAT-GTCTG-TTTCTAACAGTTGGGGTGAGAATCAGCAGTAAAAACCAGGTATATGGTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30210696 148 + 53671032 ACTTATGCCATACCGTATGTATTTCAACTTAATAACATTGTGC-AAATGTTTTAGTGTGATATACACAGATGAAGTTAAGTCTC------ACCTAGGAAAT-GTCTG-TTTCTAACAGTTGGAGTGAGAATCAGCAGTAAAAATCAGGTATATAGTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34664421 148 + 59248254 ACTTATGCCATACCGTATGTATTTCAACTTAATAACATTGTGC-AAATGTTTTAGTGTGATATACACAGATGAAGTTAAGTCTC------ACCTAGGAAAT-GTCTG-TTTCTAACAGTTGGAGTGAGAATCAGCAGTAAAAATCAGGTATATAGTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4530953 148 - 13342542 ACTTATGCCATACCGTATGTATTGCAATTTAATAACATTGTGC-AAATGTTTTAGTGTGATATACACAGATGAAGTTAAGTCTC------ACCTAGGAAAT-GTCTG-TTTCTAACAGTTGGAGTGAGAATCAGCAGTAAAAATCAGGTATATAGTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5461175 148 + 7714307 ACTTATGCCATACCGTATGTATTTCAATTTAATAACATTGTGC-AAAGGTTTTAGTGTGATATACACAGATGAAGTTAAGTCTC------ACCTAGGAAAT-GTCTG-TTTGTAACAGTTGGAGTGAGAATCAGCAGTAAAAATCAGGTATATAGTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29267292 148 + 50890351 ACTTATGCCATACCGTATGTATTTCAATTTGATAACATTGTGC-AAATATTTTAGTGTTATATACACAGATGAAGTTAAGTCTC------ACCTAGGAAAT-GTCTG-TTTCTAACAGTTGGAGTGAGAATCAGCAGTAAAAATCAGGTATATAGTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 892305 148 - 2385121 ACTTATGCCATACCGTATGTATTTCAATTTAATAACATTGTGC-AAATGTTTTAGTGTGATATACACAGATGAAGTTAAGTCTC------ACCTAGGAAAT-GTCTG-TTTGTAACAGTTGGAGTGAGAATCAGCAGTAAAAATCAGGTATATAGTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2332598 148 + 4274983 ACTTATGCCATACCGTATGTATTTCAATTTAATAACATTGGGC-AAATGTTTTAGTCTTGTATACACAGATGAAGTTAAGTCTC------ACCTAGGAAAT-GTCTG-TTTCTAACAGTTGGAGTGAGAATCAGCAGTAAAAATCAGGTATATGGTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28563465 146 + 49145316 ACTTAAACTATACCATATGTATTTCAGTGTAATAACATTGTAC-AAATGTTTTGATGTTGTAT--ACAGGTGAAGTTAAGTCTC------ATCTAGGAAAT-GTCTG-TTTCTAACAGTTGGGGTGAGAATCAGCAGTAAAAATCAAGTATATGGTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5409750 148 + 8899380 ACTTAAACCATACCATATGTATTTTAATTTAGTGACATTGTTC-AAATGTTTTGATGTTGTATACACAGGTGAAGTTAAGTCTC------ATCTAGGAAAT-GTCTG-TTTCTAACAGTTGGGTTGAGAATCAGCAGTAAAAATTAGGTATATGGTA i saiBol1.JH378197 I 190 C 0 s aotNan1.NW_018505377v1 364862 148 - 4471408 ACTTAAACCATACCATATGTATTTCAATTTAATAACATTGTAC-AAATGTTTTGATGTTGTATACATAGGTGAAGTTAAGTCTC------ATCTAGGAAAT-GTCTG-TTTCTAACAGTTGGGGTGAGAATCAGCAGTAAAAATCAGGTATATGGTA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5480653 101 + 5549422 ACTT--------CTCTATGT-----------------------------------CATTGTATTCACAGATA-----AAGTCTC------ACATAGGAAAT-GTCTG-TTTCAAATAATTGGGATGAGAATCGGTAGTAAAAATCATGTGTGTGGCA i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111093630 141 - 145441459 GCTTGTACGTTGCCATGTGTGTTTCAGTTTAAAGTAACAGAAC-ACACAGTTTGGTATTGTACCCTCAGAGGAAGTT---TTTC------AACTAGGAAGT-AGCTGACCTCCTGTAACTGGGATGTACATCT---GTAAAAATTAG--ATGTGGTA i mm10.chr7 C 0 I 1235 s canFam3.chr1 4614179 139 - 122678785 GTTTACACCATGCCATTTGTATTCTAATTTAATCACATTGTAC-AAATGGTTTGGTGCCATATACCCAGATAAAGTTAAGTCTTTATTTAACATAGGAAATAATATG-TTTCTAACA----GGGTG------------AAAAATCAGGTATGCGATA i canFam3.chr1 I 6 C 0 s dasNov3.JH563638 339281 149 + 643850 ATTTATACCATGCCATATGTATTACAATTTAGTAACCTTATACAAAATCGTTTCGTGTTTTATACACAGATAAAGTTAAGTCTT----TAACCCAGGAAAA-G--TA-TTTCTAACAGTTGGGGTGACACTCAGCAATAAAAATCAGGTATGTTGTA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e cebCap1.NW_016107633v1 1614182 1330 - 2680843 M a score=699868.000000 s hg38.chr19_GL383574v1_alt 74438 83 + 155864 GCAGCTGGTCTAGAGGAAAATAAAA---------------------------------------------------GCCCTTGGCTCCAGC-----------------------------------------------------------------CCTTTGTACAGGCCTTTAGTTTAGGGTCA-----------------------------------------------GTCTCTCTGGAAAT s panTro5.chr19 36143007 83 + 61309027 GCAGCTGGTCTAGAGGAAAATAAAA---------------------------------------------------GCCCTTGGCTCCAGC-----------------------------------------------------------------CCTTTGTACAGGCCTTTAGTTTAGGGTCA-----------------------------------------------GTCTTGCTGGAAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39889223 83 + 64411610 GCAGCTGGTCTAGAGGAAAATAAAA---------------------------------------------------GCCCTTGGCTCCAGC-----------------------------------------------------------------CCTTTGTACAGGCCTTTAGTTTAGGGTCA-----------------------------------------------GTCTTGCTGGAAAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306810 83 - 8369475 GCAGCTGGTCTAGAGGAAAATAAAA---------------------------------------------------GCCCTTGGCTCCAGC-----------------------------------------------------------------CCTTTGTACAGGCCTTTAGTTTAGGGTCA-----------------------------------------------GTCTCGCTGGAAAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63899379 83 - 106955855 GCAGCTGGTCTAGAGGAAAATAAAA---------------------------------------------------GCCCTTGGCTCCAAC-----------------------------------------------------------------CCTTTGTACGGGCCTTTAGTTTAGGGTCA-----------------------------------------------GTCTTGCTGGAAAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30210844 83 + 53671032 GCAACTGGTCTAGAGGAAAATAAAA---------------------------------------------------GCCCTTGGCTCCCAC-----------------------------------------------------------------CCTTTGTACACGCCTTTAGTTTAGGGTCA-----------------------------------------------GTCTCACTGGAAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34664569 83 + 59248254 GCAACTGGTCTAGAGGAAAATAAAA---------------------------------------------------GCCCTTGGCTCCCAC-----------------------------------------------------------------CCTTTGTACACGCCTTTAGTTTAGGGTCA-----------------------------------------------GTCTCACTGGAAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4531101 83 - 13342542 GCAACTGGTCTAGAGGAAAATAAAA---------------------------------------------------GCCCTTGGCTCCCAC-----------------------------------------------------------------CCTTCGTACACGCCTTTAGTTTAGGGTCA-----------------------------------------------GTCTCACTGGAAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5461323 83 + 7714307 GCAACTGGTCTAGAGGAAAATAAAA---------------------------------------------------GCCCTTGGCTCCCAC-----------------------------------------------------------------CCTTTATACAGGCCTTTAGTTTAGGGTCA-----------------------------------------------GTCTCACTGGAAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29267440 83 + 50890351 GCAACTGGTCTAGAGGAAAATAAAA---------------------------------------------------GCCCTTGGCTCCCAC-----------------------------------------------------------------CCTTTGTACAGGCCTTTAGTTTAGGGTCA-----------------------------------------------GTCTCACTGGAAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 892453 83 - 2385121 GCAACTGGTCTAGAGGAAAATAAAA---------------------------------------------------GCCCTTGGCTCCCAC-----------------------------------------------------------------CCTTTGTACAGGCCTTTAGTTTAGGGTCA-----------------------------------------------GTCTCACTGGAAAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2332746 83 + 4274983 GCAACTGGTCTAGAGGAAAATAAAA---------------------------------------------------GCCCTTGGCTCCCAC-----------------------------------------------------------------CCTTTGTACAGGCCTTTAGTTTAGGGTCA-----------------------------------------------GTCTCACTGGAAAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28563611 79 + 49145316 GCAGCTAGTCCAAAGGAAAATAGAA---------------------------------------------------GCCCTTGGTT----C-----------------------------------------------------------------TCTTTGTACAGGCCTTTAGTTTAGGATTG-----------------------------------------------GTCTCGCTGGAAAT i calJac3.chr22 C 0 I 3 s saiBol1.JH378197 5409898 78 + 8899380 GCAGCTAGTCCAAAGG-AAATAGAA---------------------------------------------------GCCCTTGGCT----C-----------------------------------------------------------------TCTTTGTACAGGCCTTTAGTTTAGGATTG-----------------------------------------------GTCTCGCTGGAAAT i saiBol1.JH378197 C 0 I 328 s aotNan1.NW_018505377v1 365010 79 - 4471408 GCAGCTAGTCCAAAGGAAAATAGAA---------------------------------------------------GCCCTTGGCT----C-----------------------------------------------------------------TCTTTGTACAGGCCTTTAGTTTAGGATTG-----------------------------------------------GTCTCGCTGGAAAT i aotNan1.NW_018505377v1 C 0 I 3 s otoGar3.GL873654 5480754 47 + 5549422 GCATCTAGTCCAAAGGAAAATCCAA---------------------------------------------------GCCCCTG-------------------------------------------------------------------------CTCTGACATAAGCTT--------------------------------------------------------------------------- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4614318 80 - 122678785 ACAACTAGTCCTGAGGAAAAC---A---------------------------------------------------GCCCCTGGCTCTGTT-----------------------------------------------------------------GTAATGTACAGGACTTTAAATAAGAGTTA-----------------------------------------------GTCTCATTGGAAAG i canFam3.chr1 C 0 I 10 s dasNov3.JH563638 339430 244 + 643850 GCAAATGGTACTGAAGAAAATAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCGCTGGCCCCCACCTAGGAGGAAAACCCCCTAGTTTTCTGGGCCCAATACAAACTGCATTGCTGTCACTCAGGACAATCCTTTGTATGG--CTTAGGTCCAAGATCATCCCCACTTTGACCCCTTCCAAAATTATTAAGGACTCAGGATCACAGGTCTCTCAGGAAGT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e mm10.chr7 111093771 1235 - 145441459 I e cebCap1.NW_016107633v1 1614182 1330 - 2680843 M a score=15300.000000 s hg38.chr19_GL383574v1_alt 74521 1 + 155864 C s panTro5.chr19 36143090 1 + 61309027 C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39889306 1 + 64411610 C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306893 1 - 8369475 C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63899462 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30210927 1 + 53671032 C i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34664652 1 + 59248254 C i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4531184 1 - 13342542 C i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5461406 1 + 7714307 C i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29267523 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 892536 1 - 2385121 C i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2332829 1 + 4274983 C i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28563693 1 + 49145316 C i calJac3.chr22 I 3 C 0 s saiBol1.JH378197 5410304 1 + 8899380 C i saiBol1.JH378197 I 328 C 0 s aotNan1.NW_018505377v1 365092 1 - 4471408 C i aotNan1.NW_018505377v1 I 3 C 0 s otoGar3.GL873654 5480801 1 + 5549422 C i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4614408 1 - 122678785 C i canFam3.chr1 I 10 C 0 s dasNov3.JH563638 339674 1 + 643850 C i dasNov3.JH563638 C 0 I 272 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e mm10.chr7 111093771 1235 - 145441459 I e cebCap1.NW_016107633v1 1614182 1330 - 2680843 M a score=848894.000000 s hg38.chr19_GL383574v1_alt 74522 80 + 155864 TTGAGATTTTTATTGCTTCCTCACTGGTTACTTTTTAAAAA-TTCCCCAGTCAGCTTTCTACTTTTCAGAGCTTATTTCAG s panTro5.chr19 36143091 80 + 61309027 TTGAGATTTTTATTGCTTCCTCACTGGTTACTTTTTAAAAA-TTCCCCAGTCAGCTTTCCACTTTTCAGAGCTTATTTCAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39889307 80 + 64411610 TTGAGATTTTTATTGCTTCCTCACTGGTTACTTTTTAAAAA-TTCCCCAGTCAGCTTTCCACTTTTCAGAGCTTATTTCAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306894 80 - 8369475 TTGAGATTTTTATTGCTTCCTCACTGGTTACTTTTTTAAAA-TTCCCCAGTCAGCTTTCCACTTTTCAGAGCTTATTTCAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63899463 80 - 106955855 TTGAGATTTGTATTGCTTTCTCACTGGTTACTTTTTAAAAA-TTCCCCAGTCAGCCTTCCACTTTTCAGAACTTATTTCAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30210928 80 + 53671032 TTGAGATTTTTATTGCTTTCTCACTGGTTACTTTTTTAAAA-TTCCCCAGTCAGCTTTCCGCTTTTCAGAACTTATTTTAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34664653 80 + 59248254 TTGAGATTTTTATTGCTTTCTCACTGGTTACTTTTTTAAAA-TTCCCCAGTCAGCTTTCCGCTTTTCAGAACTTATTTTAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4531185 80 - 13342542 TTGAGATTTTTATTGCTTTCTCACTGGTTACTTTTTTAAAA-TTCCCCAGTCAGCTTTCCGCTTTTCAGAACTTATTTTAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5461407 80 + 7714307 TTGAGATTTTTATTGCTTTCTCACTGGTTACTTTTTAAAAA-TTCCCCAGTCAGCTTTCCGCTTTTCAGAACTTATTTTAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29267524 80 + 50890351 TTGAGATTTTTATTGCTTTCTCACTGGTTACTTTTTTAAAA-TTCCCCAGTCAGCTTTCCGCTTTTCAGAACTTATTTTAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 892537 80 - 2385121 TTGAGATTTTTATTGCTTTCTCACTGGTTACTTTTTAAAAA-TTCCCCAGTCAGCTTTCCGCTTTTCAGAACTTATTTTAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2332830 80 + 4274983 TTGAGATTTTTATTGCTTTCTCACTGGTTACTTTTTAAAAA-TTCCCCAGTCAGCTTTCCGCTTTTCAGAACTTATTTTAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28563694 80 + 49145316 TTGAGATTTTTATTGCTTTCTCACTGGTTACTTTTTTAAAA-TTCCCCAGTCCACCTACTGCCTTTCAGAACTTATTTCAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5410305 80 + 8899380 TTGAGATTTTTATTGCTTTCTCACTGGTTACTTTTTTAAAA-TTCCCCAGGCCACTTACTGCTTTTCAGAACTTATTTCAG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 365093 80 - 4471408 TTGAGATTTTTATTGCTTTCTCACTGGTAACTTTTTAAAAA-TTCCCCTTTCCACTTATTGCTTTTCAGAACTTATTTCAG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5480802 81 + 5549422 TTGAGACTTTCATTGCTTTCTCACTGGTTACTTTTTAAACATTTTCCCAGTCAGCTTACTATTTTTAAGAACTTATTTCAA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4614409 75 - 122678785 TTGAGATTT---TTGTTTTTTCCCTGTCTACTTTTTAAAAA-TTACCCAGTCAACT--CTGATTTTCAGAACTTATTTTGA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e dasNov3.JH563638 339675 272 + 643850 I e mm10.chr7 111093771 1235 - 145441459 I e cebCap1.NW_016107633v1 1614182 1330 - 2680843 M a score=55692.000000 s hg38.chr19_GL383574v1_alt 74602 4 + 155864 ATTT s panTro5.chr19 36143171 4 + 61309027 ATTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39889387 4 + 64411610 ATTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306974 4 - 8369475 ATTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63899543 4 - 106955855 ATTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30211008 4 + 53671032 ATTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34664733 4 + 59248254 ATTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4531265 4 - 13342542 ATTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5461487 4 + 7714307 ATTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29267604 4 + 50890351 ATTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 892617 4 - 2385121 ATTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2332910 4 + 4274983 ATTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28563774 4 + 49145316 ATTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5410385 4 + 8899380 ATTT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 365173 4 - 4471408 ATTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5480883 4 + 5549422 ATTT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111095006 4 - 145441459 aTTT i mm10.chr7 I 1235 C 0 s canFam3.chr1 4614484 4 - 122678785 ATTT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e dasNov3.JH563638 339675 272 + 643850 I e cebCap1.NW_016107633v1 1614182 1330 - 2680843 M a score=158214.000000 s hg38.chr19_GL383574v1_alt 74606 14 + 155864 AAGAGTTATCCTTG s panTro5.chr19 36143175 14 + 61309027 AAGAGTTATCCTTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39889391 14 + 64411610 AAGAGTTATCCTTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306978 14 - 8369475 AAGAGTTATCCTTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63899547 14 - 106955855 AAGAGTTATCCTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30211012 14 + 53671032 AAAAGTTATCCCTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34664737 14 + 59248254 AAAAGTTATCCCTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4531269 14 - 13342542 AAAGGTTATCCCTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5461491 14 + 7714307 AAAAGTTATCCCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29267608 14 + 50890351 AAAAGTTATCCCTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 892621 14 - 2385121 AAAAGTTATCCCTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2332914 14 + 4274983 AAAAGTTATCCCTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28563778 14 + 49145316 AAAAGTTATCCTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5410389 14 + 8899380 AAAAGTTATCCTTT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 365177 14 - 4471408 AAAAGTTATCCTTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5480887 14 + 5549422 AAAAGTTCCCCTTT i otoGar3.GL873654 C 0 I 288 s mm10.chr7 111095010 14 - 145441459 TAAAGTTTGTTTTT i mm10.chr7 C 0 I 3 s canFam3.chr1 4614488 14 - 122678785 AAAAGTTATCCTTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 339947 14 + 643850 AAAATTAATCCTTT i dasNov3.JH563638 I 272 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e cebCap1.NW_016107633v1 1614182 1330 - 2680843 M a score=2528640.000000 s hg38.chr19_GL383574v1_alt 74620 217 + 155864 TAAAATTGATTTTTAAACC---ATTGCTTCCTCCTGGCATGAAATTTTGGAGAGAAATGTTA---TACTGACTGGG-TATTTTATTGCTTAGT-AAAGACATCAAAGACTTGGGGATTTTATGAAACTTGTTTCAAAGTATGTTG-ACAGTTGTATTTGATGAGTTTGACTATTGAGTTGAGGG-T-----------------------------------------------------------TTAAGTCCTATCACTGCTTTTAAAAAATTATTAGGGAGAAC s panTro5.chr19 36143189 217 + 61309027 TAAAattgatttttaaatc---attgcttcctcctggcatgaaattttggagagaaatgtta---tactgactggg-tattttattgcttagt-aaagacatcaaagacttggggattttatgaaacttgtttcaaagtgtgttg-acagttgtatttgatgagtttgactattgagttgaggg-t-----------------------------------------------------------ttaagtcctatcactgcttttaaaaaattattagggagaac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39889405 217 + 64411610 TAAAattgatttttaaatc---attgcttcctcctggcatgaaattttggagagaaatgtta---tactgactggg-tattttattgcttagt-aaagacatcaaagacttggggattttatgaaacttgtttcaaagtgtgttg-acagttgtatttgatgagtttgactattgagttgaggg-t-----------------------------------------------------------ttaagtcctatcactgcttttaaaaaattattagggagaac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6306992 217 - 8369475 TAAAattgatttttaaacc---attgcttcctcctggcatgaaattttggagagaaatgtta---tactgactggg-tattttattgcttagt-aaagacatcaaagacttggggattttatgaaacttgtttcaaagtgtgttg-acagttgtatttgatgagtttgactattgagttgaggg-t-----------------------------------------------------------ttAAGTCCTATCACTGCTTTTAAAAAATTATTAGGGAGAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63899561 213 - 106955855 TAAAATTGATTTTTAAACC---ATTGTTTCCTCCTGGCATGAAATTTTGGAGAGAAATGTTA---TACTGAC-----TATTTTATTGCTTAGT-AAAGACATCAAAGACTTGGGGATTTTATGAAACTTGCTTCAAAGTATGTTG-ACAGTTGTATTTGATGAGTTTGACTACTGAGTTGAGGG-T-----------------------------------------------------------TTAAGTCCTATCACTGCTTTTAAAAAATTATTAGGGAGAAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30211026 217 + 53671032 TAAAattgatttttaaacc---attgcttcctcctggcatgaaattttggagagaaatgtta---tactgtctggg-tattttattgcctagt-aaagacatcaaagacttggggattttatgaaacttgtttcaaagtatgttg-acagttgtatttgatgaatttgactactgagttgaggg-t-----------------------------------------------------------ttaagttctatcacggcttttaaaaaattattagggagaac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34664751 217 + 59248254 TAAAATTGATTTTTAAACC---ATTGCTTCCTCCTGGCATGAAATTTTGGAGAGAAATGTTA---TACTGTCTGGG-TATTTTATTGCCTAGT-AAAGACATCAAAGACTTGGGGATTTTATGAAACTTGTTTCAAAGTATGTTG-ACAGTTGTATTTGATGAATTTGACTACTGAGTTGAGGG-T-----------------------------------------------------------TTAAGTTCTATCACGGCTTTTAAAAAATTATTAGGGAGAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4531283 217 - 13342542 TAAAattgatttttaaacc---attgcttcctcctggcatgaaattttggagagaaatgtta---tactgtctggg-tattttattgcctagt-aaagacatcaaagacttggggattttatgaaacttgtttcaaagtatgttg-acagttgtatttgatgaatttgactactgagttgaggg-t-----------------------------------------------------------ttaagttctatcacggcttttaaaaaattattagggagaac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5461505 217 + 7714307 TAAAattgatttttaaacc---attgcttcctcctggcatgaaattttggagagaaatgtta---tactgtctggg-tattttattgcctagt-aaagacatcaaagacttggggattttatgaaacttgtttcaaagtatgttg-acagttgtatttgatgaatttgactactgagttgaggg-t-----------------------------------------------------------ttaagttctatcacggcttttaaaaaattattagggagaac i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29267622 217 + 50890351 TAAAATTGATTTTTAAACC---ATTGCTTCCTCCTGGCATGAAATTTTGGAGAGAAATGTTA---TACTGTCTGGG-CATTTTATTGCTTAGT-AAAGACATCAAAGACTTGGGGATTTTATGAAACTTGTTTCAAAGTATGTTG-ACAGTTGTATTTGATGAATTTGACTACTGAGTTGAGGG-T-----------------------------------------------------------TTAAGTTCTATCACGGCTTTTAAAAAATTATTAGGGAGAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 892635 217 - 2385121 TAAAatcgatttttaaacc---attgcttcctcctggcatgaaattttggagagaaatgtta---tactgtctggg-tattttattgcctagt-aaagacatcaaagacttggggattttatgaaacttgtttcaaagtatgttg-acagttgtatttgatgagtttgactactgagttgaggg-t-----------------------------------------------------------ttaagttctatcacggcttttaaaaaattattagggagaac i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2332928 217 + 4274983 TAAAattgatttttaaacc---attgcttcctcctggcatgaaattttggagagaaatgtta---tactgtctggg-tattttattgcttagt-aaagacatcaaagacttggggactttatgaaacttgtttcaaagtatgttg-acagttgtatttgatgaatttgactactgagttgaggg-t-----------------------------------------------------------ttaagttctatcacggcttttaaaaaattattagagagaac i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28563792 217 + 49145316 TAAAATTGATTTTTAAGCC---AGTGCTTCCTCCTGGCATGAAATTTTGGAGAGAAATGTTA---TACTGTCTGGG-TATTTTATTGCTTAGT-AAAGAAATCAAAGACTTGGGGATTTAATGAAACTTGTTTCACAGTGTGTTG-ACAGTTGTATTTGCTGAGTTTGACTACTGAGTTGAGGG-T-----------------------------------------------------------TTAAGTTCTATCACTGTTTTTTAAAAATTATTAGGGAGAAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5410403 218 + 8899380 TAAAATGGATTTTTAAGCC---AGTGCTTCCTCCTGGCATCAAATTTTGGAGAAAAATGTTA---TACTGTCTGGG-TATTTTATTGCTTAGT-AAAGACATCAAAGACTTGGGGATTTACTGAAACTTGTTTCACAGTGTGTTG-ACGGTTGTATTTGATGAGTTTGACTACTGAGTTGAGGGTT-----------------------------------------------------------TTAGGTTCTATCACTGTTCTTAAAAAATTATTAGGGAGAAC i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 365191 217 - 4471408 TAAAATTGATTTTTAAGCC---AGtgcttcctcctggcatgaaattttggggagaaatgtta---tactgtctggg-tatttcattgcttagt-aaagacatcaaagactcagggatttaatgaaacttgtttcacagtgtgttg-acagttgtatttgatgagtttgactactgagttgaggg-t-----------------------------------------------------------ttaagttctatcactgtttttaaaaaattattagggagaac i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5481189 221 + 5549422 TAAAATAGATTTCTAAATC---ATTGCTTTCCCTTGGCATGAATTTTTTAAGAGAAGTATTATTTTACCGTCTGGG-CATTTTATTACTTTAT-AAAGACATCAGAG--TTAGGAATTTT-TGAAGCTTATTTCAATGTGTGTTGTCCATTTTTTTTTAATGAGTTTAACTTCTAAATTGAAGC-TTTAA-------------------------------------------------------TTAAGTTCTTTCTCTGTTTTT-AAAAATTATTAGgggcagc i otoGar3.GL873654 I 288 I 416 s mm10.chr7 111095027 195 - 145441459 TTAAATATATTTCAAGTCCAATACTGCTTTCTCCTATCATGCAATTTTAGGGAGAAATACTACTTTACCTTCTGGATTGTTGTATTGCTTGGTAAAAGGTGTCAAA-ATTTAGGGATTTTATGAAACTTGTTTCAAA---------AGAGTT------------TTTGAGTGACCATGTGACAG-C-----------------------------------------------------------TCATGTA--ACTGTTGTGTTTATAA---TGTTGGGGC---- i mm10.chr7 I 3 C 0 s canFam3.chr1 4614502 221 - 122678785 AAAAATGAGCTTCTAAATC---ATTGATTTCTCCCAGCATGAGACTTTGGAGAAAAATGTTATTTTACTGTCTGGG-TATTTTATTGCTTAGT-AAAGACATCAAAGACTTCAGGATCTTAATAATCTTTTTCCAAAGTATGTTG-TCATTTGTATTTGATGAGCTTAACTACTAAGTTGAAGG-TTTAA-------------------------------------------------------TTAAGTTCTGTTATTGTACTT-AAAAATTATTAAGATGC-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 339961 275 + 643850 ATTCATGGATGTTTAAATC---ATTACTTTCTACTGGTATGAAATTTTGGAGAGAAGGGTTATTTTACTTGCTGGC-TGTTTTGTTGCTTGGT-AAAGACATCAAAGACTTGGGAATTT-ATGGAGGTTCTTCCAAAGTATGTTG-TCAGATGTGTTTGATGAGTTTGACTACTAAGTTGAAGA-TTTGATTAAGTTTTACCAAAGTATGTTGTCAAATGAGTTTCAGTTTAGCTAAGTTGAAATTTAAGTTTTATCATT--TTTAAGAAGATTATTAGGAAAGC- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e cebCap1.NW_016107633v1 1614182 1330 - 2680843 M a score=925057.000000 s hg38.chr19_GL383574v1_alt 74837 101 + 155864 AACCAAAGATGAGGAAGTATGCCTGTATTTT---GG-----------GGTGGGGT--------------TC---------------ACCACTGCATTAA----------CCTCTACTGACTGGAAGATGCAGTCAAC----AATGAGGTACTACTGAG s panTro5.chr19 36143406 101 + 61309027 aaccaaAGATGAGGAAGTACGCCTGTATTTT---GG-----------GGTGGGGT--------------TC---------------ACCACTGCATTAA----------CCTCCACTGACTGGAAGATGCAGTCAAC----AATGAGGTACTACTGAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39889622 101 + 64411610 aaccaaAGATGAGGAAGTACGCCTGTATTTT---GG-----------GGTGGGGT--------------TC---------------ACCACTGCATTAA----------CCTCCACTGACTGGAAGATGCAGTCAAC----AATGAGGTACTACTGAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6307209 101 - 8369475 AACCAAAGATGAGGAAGTACGCCTGTATTTT---CG-----------GGTGGGGT--------------TC---------------ACCACTGCATTAA----------CCTCTACTGACTGGAAGATGCAGTCAAC----AATGAGGTACTACTGAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63899774 103 - 106955855 AACCAAAGATGAGGAA--------GTATTTT---GG-----------GGTGGGGT--------------TC---------------ACCACTGCTGGAAGTAGTCCAGTCCACTACTGACTGGAAGATGCAGTCAAC----AATGAGGTACTACTGAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30211243 101 + 53671032 aaccaaAGATGAGGAAGTACACCTGTATTTT---GG-----------GCTGGGGT--------------TC---------------ACCGTTACTTTAA----------CCTCTGCTGACTGGAAGATGCAGTCAAC----AATGAGGTACTACTGAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34664968 101 + 59248254 AACCAAAGATGAGGAAGTACACCTGTATTTT---GG-----------GCTGGGGT--------------TC---------------ACCGTTACTTTAA----------CCTCTACTGACTGGAAGATGCAGTCAAC----AATGAGGTACTACTGAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4531500 101 - 13342542 aaccaaAGATGAGGAAGTACACCTGTATTTT---GG-----------GCTGGGGT--------------TC---------------ACCGTTACTTTAA----------CCTCTACTGACTGGAAGATGCAGTCAAC----AATGAGGTACTACTGAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5461722 101 + 7714307 aaccaaAGATGAGGAAGTACACCTGTATTTT---GG-----------GCTGGGGT--------------TC---------------ACCGTTACTTTAA----------CCTCTACTGACTGGAAGATGCAGTCAAC----AATGAGGAACTACTGAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29267839 101 + 50890351 AACCAAAGTTGAGGAAGTACACCTGTATTTT---GG-----------GCTGAGGT--------------TC---------------ACCGTTACTTTAA----------CCTCTACTGACTGGAAGATGCAGTCAAC----AATGAGGTACTACTGAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 892852 101 - 2385121 aaccaaAGATGAGGAAGTACACCTGTATTTT---GG-----------GCTGGGGT--------------TC---------------ACCGTTACTTTAA----------CCTCTACTGACTGGAAGATGCAGTCAAC----AATGAGGTACTACTGAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2333145 101 + 4274983 aaccaaAGATGAGGAAGTACACCTGTATTTT---GG-----------GCTGGGGT--------------TC---------------ACCGTTGCTTTAA----------CCTCTACTGACTGGAAGATGCAGTCAAC----AATGAGGTACTACTGAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28564009 97 + 49145316 AACCAAAGATGAGGAAGTATACCTGTATTTT---GG-----------GTGGTGGT---------------------------------CACTGCTTTAA----------CCTCTACTGACTGGAAAATGCAGTAAAC----AATGAGTTACTACTGAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5410621 97 + 8899380 AACCAAAGATTAGGAAGTATATGTATATTTT---GG-----------GTGGTGGT---------------------------------CATTGCTTTAA----------CCTCTACTGACTGGAAAATGCAGTAAAC----AGTGAGTTACTACTGAG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 365408 97 - 4471408 aaccaaAGATGAGGAAGTATACCTGTATTTT---GG-----------GTGGTGGT---------------------------------CACTGCTTTAA----------CCTCTACTGACTGGAAAATGCAGTAAAC----AATGAGTTACTACTGAG i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111095222 114 - 145441459 AACCAAAGGTAGTAAGGTCTCCCCGTATTGC---AG-----------AGTGGCGT--------------GCCTGCTTGATAGGCCAGCCACTCCTGCAG----------CCTCTGCTGACTAGGACATACAGAGAGT----AAGCAGAGAGT--TGAA i mm10.chr7 C 0 C 0 s canFam3.chr1 4614723 122 - 122678785 AACCAAAGATAGTGAGGTGTGCCTGTATCTTATGGG-----------GCTGGAACCAGACCACACCATACC---------------ACCACTGCTGTAA----------CCTCTACTAACTGGAAAATGAAGTTAACAAATAATGAGCCACTTATGGG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 340236 124 + 643850 AACCAAAGATGGGGGA-TGCACCTGTATATT---AGGGGAACTTTTTGCTGGGAC-----CAGCCCATAAC---------------ACCACTGCTGTAA----------ATGCTACTAACTCTAAAGTGCATTTAACAAATAATAAGCTACTGCTGGC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e otoGar3.GL873654 5481410 416 + 5549422 I e cebCap1.NW_016107633v1 1614182 1330 - 2680843 M a score=837570.000000 s hg38.chr19_GL383574v1_alt 74938 90 + 155864 TATGGAAGTTATAGAAGGAG-TTTCGTGGAAATGAGTGAGAC-----------AGGTTTTTCTATGAAAGT-AAAAGTGGGGGAGTATATTTAAAGATAATTT s panTro5.chr19 36143507 90 + 61309027 TATGGAAGTTATAAAAAGAG-TTTCGTGGAAATGAGTGAGAC-----------AGGTTTTTCTATGAAAGT-AAAAGTGGGGGAGTATATTTAAAGATAATTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39889723 90 + 64411610 TATGGAAGTTATAAAAAGAG-TTTCGTGGAAATGAGTGAGAC-----------AGGTTTTTCTATGAAAGT-AAAAGTGGGGGAGTATATTTAAAGATAATTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6307310 90 - 8369475 TATGGAAGTTATAAAAAGAG-TTTCGTGGAAATGAGTGAGAC-----------AGGTTTTTCTATGAAAGT-AAAAGTGGGGGAGTATATTTAAAGATAATTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63899877 90 - 106955855 TATGGAAATTATAAAAAGAG-TTTCGTGAAAATCAGTGAGAC-----------AGGTTTTTCTATGAAAGT-AAAAGGGAGGGAGTATATTtaaagataattt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30211344 85 + 53671032 TATGGAAGTTATAAAAAGAC-TTTCGTGGAAATCAGTGAG-------------AGATTTTTCTATGAAAGT-AAAA---GGGGGGTATATTTAAAGATAATTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34665069 85 + 59248254 TATGGAAGTTATAAAAAGAC-TTTCGTGGAAATCAGTGAG-------------AGATTTTTCTATGAAAGT-AAAA---GGGGGGTATATTTAAAGATAATTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4531601 85 - 13342542 TATGGAAGTTATAAAAAGAC-TTTCGTGGAAATCAGTGAG-------------AGATTTTTCTATGAAAGT-AAAA---GGGGGGTATATTTAAAGATAATTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5461823 85 + 7714307 TATGGAAGTTATAAAAAGAC-TTTCGTGGAAATCAGTGAG-------------ATTTTTTTCTATGAAAGT-AAAA---GGGGGGTATATTTAAAGATAATTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29267940 85 + 50890351 TATGGAAGTTATAAAAAGAC-TTTCGTGGAAATCAGTGAG-------------AGATTTTTCTATGAAAGT-AAAA---GGGGGGTATATTTAAAGATAATTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 892953 85 - 2385121 TATGGAAGTTATAAAAAGAC-TTTCGTGGAAATCAGTGAG-------------AGATTTTTCTATGAAAGT-AAAA---GGGGGGTATATTTAAAGATAATTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2333246 86 + 4274983 TATGGAAGTTATAAAAAGAC-TTTCGTGGAAATCAGTGAG-------------AGATTTTTCTATGAAAGT-AAAA--GGGGGGGTATATTTAAAGATAATTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28564106 88 + 49145316 TATGGAAGTTATAAAAAGAGTTTTCCTGGAAATCAGTGAGAC-----------AGATTTTTCTATGACAGT-AAAA---AGGTGGTGTATTTAAAGATAATTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5410718 89 + 8899380 TGTGGAAGTTATAAAAAGAGTTTTCCTGGAAATCAGTGAGAC-----------AGATTTTTCTATGACAGTAAAAA---AGGGGGTCTATTTAAAGATAATTT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 365505 88 - 4471408 TGTGGAAGTTATAGAAAGAGTTTTCCTGGAAATCAGTGAGAC-----------AGATTTTTCTATGACAGT-AAAA---AAGGGGTGTATTTAAAGATAATTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5481826 85 + 5549422 tacagaggttctag--tgTA-TTTCCTAGAAATTAGTGAAAC-----------CTATTTTTATGTGAAAGT-GAAA---GAAGGTTATATTTAAAGGTAATTT i otoGar3.GL873654 I 416 I 283 s mm10.chr7 111095336 94 - 145441459 TGTGGACATTA-GAGCAGTG-CTGCCCAAGAACCAGTAGGACAGTAGGACAGAAATTTTTTCTGTGAAATA-AGAG---GAAGGGTGTATT--AAGGTAACA- i mm10.chr7 C 0 C 0 s canFam3.chr1 4614845 83 - 122678785 TGTGGAAGTCA----AAATG-TTTCTTGGAAATTAGTGAAAT-----------GCATTTATATGTGAAAGG-GAAA---GGAGGGTATATTTGAAAGTAATGG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 340360 82 + 643850 TGTAGAGGTTATAA-AAGTG-TTTGCTGGAAATCATTGAA-------------ACATTTATACATGAAAGT-AAAA---GGAGTGTGTATTTAAAGA-AATC- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e cebCap1.NW_016107633v1 1614182 1330 - 2680843 M a score=385276.000000 s hg38.chr19_GL383574v1_alt 75028 50 + 155864 AAAAT---AAACTTGAGCAAAGTAAAAAGAAA-----ATAATACACCAATAATTTGGA s panTro5.chr19 36143597 49 + 61309027 AAAAT---AAACTTGAGCAAAGTAAAAAG-AA-----ATAATACACCAATAATTTGGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39889813 49 + 64411610 AAAAT---AAACTTGAGCAAAGTAAAAAG-AA-----ATAATACACCAATAATTTGGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6307400 49 - 8369475 AAAAT---AAACTTGAGCAAAGTAAAAAG-AA-----ATAATACACCAATAATTTGGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63899967 49 - 106955855 aaaat---aaacttgagtaaagtaaaAAG-AA-----ATAATACACCAGTAATTTGGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30211429 46 + 53671032 CAAAT---AAACTTGAGCAAAGTAAAAAG-A--------AATACGCCAATAATTTGGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34665154 46 + 59248254 CAAAT---AAACTTGAGCAAAGTAAAAAG-A--------AATACGCCAATAATTTGGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4531686 46 - 13342542 CAAAT---AAACTTGAGCAAAGTAAAAAG-A--------AATACGCCAATAATTTGGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5461908 46 + 7714307 CAAAT---AAACTTGAGCAAAGTAAAAAG-A--------AATACGCCAATAATTTGGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29268025 46 + 50890351 CAAAT---AAACTTGAGCAAAGTAAAAAG-A--------AATACGCCAATAATTTGGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 893038 46 - 2385121 CAAAT---AAACTTGAGCAAAGTAAAAAG-A--------AATACGCCAATAACTTGGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2333332 46 + 4274983 CAAAT---AAACTTGAGCAAAGTAAAAAG-A--------AATACGCCAATAATTTGGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28564194 44 + 49145316 GAAGT-----ACTTGAGCAAAGTAAAAGA-T--------AATAAGCCAATAATTTGGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5410807 43 + 8899380 -AAGT-----ATTTGAGCAAAGTAAAAGG-T--------AATAAGCCAATAATTTGGA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 365593 44 - 4471408 AAAAT-----ACTTGAGCAAAGTAAAAGA-T--------AATAAGCCAGTAATTTGGA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5482194 49 + 5549422 aaaaa---aaaaaaaGGCAACATAAAACA-TAT----TTAATA-ATCAATAATTTGGA i otoGar3.GL873654 I 283 C 0 s mm10.chr7 111095430 41 - 145441459 GAAGT---AAACTTAAGCAGACTAAGGAA-G-------------AGCCATGGCTTGGA i mm10.chr7 C 0 C 0 s canFam3.chr1 4614928 55 - 122678785 GAAACTTAATACTTAAGTAAGTTAAAAGT-ACT--TATTAATAAACCAGTAATTTGAA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 340442 54 + 643850 GAAAT---GTATTTTAGTAGAGTAGAAAG-AAAGACATTAATAAATCAATAATTTGGG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e cebCap1.NW_016107633v1 1614182 1330 - 2680843 M a score=3756706.000000 s hg38.chr19_GL383574v1_alt 75078 239 + 155864 ACATGAGCTAAA--TTT------TTTTTTCTTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTCT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAACATTGATTTCAGTCTTTGCAAAGAATGAAGAAGTGAATTCGCTGTA-CATTTGTCACCAGCACTGGGTTTTTGTTT--TTTG-TTTGTTTTTCCGCTTAATTTCAAAGATAAAATGCAGTTACTTTTGGGGGT--GG s panTro5.chr19 36143646 239 + 61309027 ACATGAGCTAAA--TTT------TTTTTTCTTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTCT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAACATTGATTTCAGTCTTTGCAAAGAATGAAGAAGTGAATTCGCTGTA-CATTTGTCACCAGCACTGGGTTTTTGTTT--TTTG-TTTGTTTTCCCGCTTAATTTCAAAGATAAAATGCAGTTACTTTTGGGGGT--GG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39889862 238 + 64411610 ACATGAGCTAAA---TT------TTTTTTCTTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTCT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAACATTGATTTCAGTCTTTGCAAAGAATGAAGAAGTGAATTTGCTGTA-CATTTGTCACCAGCACTGGGTTTTTGTTT--TTTG-TTTGTTTTCCCGCTTAATTTCAAAGATAAAATGCAGTTACTTTTGGGGGT--GG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6307449 241 - 8369475 ACATGAGCTAAATTTTT------TTTTTTCTTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTCT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAACATTGATTTCCGTCTTTGCAAAGAATGAAGAAGTGAATTCGCTGTA-CATTTGTCACCAGCACTGGGTTTTTGTTT--TTTG-TTTGTTTTTCCGCTTAATTTCAAAGATAAAATGCAGTTACTTTTGGGGGT--GG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63900016 239 - 106955855 ACATGAGCTAAA--TTT------TTTTTTCTTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGCCTCT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAACATTGATTTCAGTCTTTGCGAAGAACGAAGAAGTGAATTCGCTGTA-CATTTGTCACCAGCACTGGGTTTTTGTTT--TTTG-TTTGTTTTTCCGCTTAATTTCAAAAATAAAATGCAGTTACTTTTGGGGGT--GG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30211475 239 + 53671032 ACATGAACTAAA--TTT------TTTTTTCTTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTCT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAAAATTGATTTCAGTCTTTGCGAAGAATGAAGAAGTGAATTCGCTGTA-CATTTGTCACCAGCACTGGGTTTTTGTTT--TTTG-TTTGTTTTTCCGCTTAATTTCAAAGATAAAATGCAGTTACTTTTGGGGGT--GG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34665200 239 + 59248254 ACATGAACTAAA--TTT------TTTTTTCTTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTCT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAATATTGATTTCAGTCTTTGCGAAGAATGAAGAAGTGAATTCGCTGTA-CATTTGTCACCAGCACTGGGTTTTTGTTT--TTTG-TTTGTTTTTCCGCTTAATTTCAAAGATAAAATGCAGTTACTTTTGGGGGT--GG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4531732 239 - 13342542 ACATGAGCTAAA--TTT------TGTTTTCTTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTCT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAAAATTGATTTCAGTCTTTGCGAAGAATGAAGAAGTGAATTCGCTGTA-CATTTGTCACCAGCACTGGGTTTTTGTTT--TTTG-TTTGTTTTTCCGCTTAATTTCAAAGATAAAATGCAGTTACTTTTGGGGGT--GG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5461954 240 + 7714307 ACATGAACTAAA-TTTT------TTTTTTCTTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTCT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAAAATTGATTTCAGTCTTTGCGAAGAATGAAGAAGTGAATTCGCTGTA-CATTTGTCACCAGCACTGGGTTTTTGTTT--TTTG-TTTGTTTTTCCGCTTAATTTCAAAGATAAAATGCAGTTACTTTTGGGGGT--GG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29268071 239 + 50890351 ACATGAGCTAAA--TTT------TTTTTTCTTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTCT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAAAATTGATTTCAGTCTTTGCGAAGAATGAAGAAGTGAATTCGCTGTA-CATTTGTCACCAGCACTGGGTTTTTGTTT--TTTG-TTTGTTTTTCCGCTTAATTTCAAAGATAAAATGCAGTTACTTTTGGGGGT--GG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 893084 239 - 2385121 ACATGAACTAAA--TTT------TTTTTTCTTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTCT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAAAATTGATTTCAGTCTTTGCGAAGAATGAAGAAGTGAATTCGCTGTA-CATTTGTCACCAGCACTGGGTTTTTGTTT--TTTG-TTTGTTTTTCCGCTTAATTTCAAAGATAAAATGCAGTTACTTTTGGGGGT--GG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2333378 238 + 4274983 ACATGAGCTAAA--TTT------TTTTTTCTTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTCT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAAAATTGATTTCAGTCTTTGCGAAGAATGAAGAAGTGAATTCGCTGTA-CATTTGTCACCAGCACTGGG-TTTTGTTT--TTTG-TTTGTTTTTCCGCTTAATTTCAAAGATAAAATGCAGTTACTTTTGGGGGT--GG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28564238 238 + 49145316 ACATGAGCTAAA--TTT------TTTTTTCTTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTCT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAAAATTGATTTCAGTCTTTGCGAAGAATGAAGAAGTGAATTCGCTGTA-CATTTGTCACCAGCACTGGGTTTTAGTTT--TTTG-TTTGTTTTTCCGCTT-ATTTCAAAGATAAAATGCAGTTACTTTTGGGGGT--GG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5410850 242 + 8899380 ACATGAGCTAAA--TTT------TTTTTTCTTTTTTAGAAAGACAACAAAGCTGCTGCATAGTCTACAAACAAGTCTCT-GAAAAAATTAGGTGAATTTCTAGCTCTTCATGGTCCTGAAAATTGATTTCAGTCTTTGCGAAGAATGAAGAAGTGAATTCGCTGTA-CATTTGTCACCAGCACTGGGTTTTAGTTT--TTTG-TTTGTTTTTCCGCTTAATTTCAAAGATAAAATGCAGTTACTTTTGGGGGT--GG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1615522 238 - 2680843 ACATGAGCT-AA--TTT------TTTTTTCTTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTCT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAAAATTGATTTCAGTCTTTGCGAAGAATGAAGAAGTGAATTCGCTGTA-CATTTGTCACCAGCACTGGGTTTTAGTTT--TTTG-TTTGTTTTTCCGCTTAATTTCAAAGATAAAATGCAGTTACTTTTGGGGGT--GG i cebCap1.NW_016107633v1 M 1330 C 0 s aotNan1.NW_018505377v1 365637 239 - 4471408 ACATGAGCTAAA--TTT------TTTTTTCTTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTCT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAAAATTGATTTCAGTCTTTGCGAAGAATGAAGAAGTGAATTCGCTGTA-CAGTTGTCACCAGCACTGGGTTTTAGTTT--TTTG-TTTGTTTTTCTGCTTAATTTCAAAGATAAAATGCAGTTACTTTTGGGGGT--GG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5482243 237 + 5549422 AGATGAGCT-AA--TTT------TTTTTTCCTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTTT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAAAATTGGTTTCAGTCTTTGCGAAGAATGAAGAAGTGAATTCGCTATA-TATTTGTCACCAGCACTGGGGTTTTG-----TTTG-TTTGTTTTCCTGCTTAATTTCAAAGATAAAATGCAGTTACTTTGGGGGGGGAGG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111095471 229 - 145441459 ACATGAACTAAT--ACG------TCTTTTCCTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTTT-GAAAA---TAGGTG-ACTCCTAGCTCTTCATGGTCCTGGAAAGTGCTTTCAGTCTTTGTGAAGAATGAAGAAGTGAAGTTGCTGTCTTGCCTGTCACCAGCACTGGG--------T--TTTG-TCTGTTTT-CTGCTTCATTTCAAAGCTACACTGCAGTTGCTTT-GGGGCA--GG i mm10.chr7 C 0 C 0 s canFam3.chr1 4614983 238 - 122678785 ACATGAGCTAAT--TAT------TTTTTTCCTTTTTAGAAAGACAACAAAGTTGCTGCATAGTCTACAAACAAGTCTTT-GAAAA---TAGGTGAATTTCTAGCTCTTCATGGTCCTGAGAATTGGTTTCAGTCTTTGAGAAGAATGAAGAAGTGAATTTGCTGTA-TATTTGTCACCAGCACTGGGTTTTTGTTTG-TTTG-TTTGTTTTTCTGCTTAATTTCAAAGATTCAATGCAGTTACTTTTGGGG----GG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 340496 248 + 643850 ACACAAACTAAA--TTTTTCTTCTTTTTTTTTTTTTAGAAAGACAACAAAGTTGCTGCGTAGTCTACAAATGAGTCTTTCGAACC---TAGATGAATTTCTAGCTCTTCATGGTCCTGAAAATTGGTTTCAGTCTTTGTGAAGAATGAAGAAGTGAATTCTCTGTA-TATTTGTCACCAGCACTGGgttttattttgttttgttttgttttTCTGCTTAATTTC-AAGATATAATACAGTTACTGGTGGGGGG--GG i dasNov3.JH563638 C 0 I 2 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I a score=3976078.000000 s hg38.chr19_GL383574v1_alt 75317 317 + 155864 AAGGCTCATCTTAAAACATGAGCATTAAATATATTTGGAATAGCAGAAGGTTAAGTAATTTCTTATGTATAGTTAAACTAAAGCAGTACTTCAGTGGGACTTAACAAGTATTTTTTCATCACTGAAAGGTTTTTTTTTTTT-ATCACTA---AATTGTATTTGGCA---ATTG---CAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGG-Ttgtgtgtgtgtgtgtgtgt----gtgtgtgtgtgtgt--gtgtgtgtgtatgtgtgtgtCTTTTTCCTCCTTTCTTTTGGGGAATCCTGTAATA-------TGAGGTAGCTTA s panTro5.chr19 36143885 319 + 61309027 AAGGCTCATCTTAAAACATGAGCATTAAATATATTTGGAATAGCAGAAGGTTAAGTAATTTCTTATGTATAGTTAAACTAAAGCAGTACTTCAGTGGAACTTAACAAGTATTTTTTCATCACTGAAAGGTTTTTTTTTTTTAATCACTA---AATTGTATTTGGCA---ATTG---CAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGGTTtgtgtgtgtgtgtgtgtgt----gtgtgtgtgtgtgt--gtgtgtgtgtgtgtgtgtATCTTTTTCCTCCTTTCTTTTGGGGAATCCTGTAATA-------TGAGGTAGCTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39890100 303 + 64411610 AAGGCTCATCTTAAAACATGAGCATTAAATATATTTGGAATAGCAGAAGGTTAAGTAATTTCTTATGTATAGTTAAACTAAAGCAGTACTTCAGTGGGACTTAACAAGTATTTTTTCATCACTGAAAGGTTTTTTTTTTTA-ATCACTA---AATTGTATTTGGCA---ATTG---CAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGG-Ttgtgtgtgtgtgtgtgtgt----gtgtgtgtgtg----------------tgtgtgtATCTTTTTCCTCCTTTCTTTTGGGGAATCCTGTAATA-------TGAGGTAGCTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6307690 310 - 8369475 AAGGCTCATCTTAAAACATGAGCATTAAATATATTTGGAATAGCAGAAGGTTAAGTAATTTCTTATGTATAGTTAAACTAAAGCAGTACTTCAGTGGGATTTAACAAGTATTTTTTCATCACTGAAAGGTTTTTTTTTTA--ATCACTA---AATTGTATTTGGCA---ATTG---CAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGG-Ttgtgtgtgtgtgtgcgtgt----gtgtgtgtgtgtgt--gtgtg------tgtgtgtATCTTTTTCCTCCTTTCTTTTGGGGAATCCTATAATA-------TGAGGTTGCTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63900255 302 - 106955855 AAGGCTCATCTTAAAACATGAGCATTAAATATATTTGGAATAGCAGAAGGTTAAGTAATTTCTTATGTATAGTTAAACTAAAGCAGTACTTCAGTGGGACTT-ACAAGTATTTTTTCATCACTGAAAGGTTTTTTCTTTTT-ATCACTA---AATTGTATTTGGCA---ATTG---CAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGG-Ttgtgtgtgtgcgtgcgtgc----gcgtgtgtgtg----------------tgtgtgtATCTTTTTCCTCCTTTCTTTTGGGGAATCCTGTAATA-------TGAGGTAGCTTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30211714 306 + 53671032 AAGGCTCATCTTAAAACATGAGCATTAAATCTATTTGGAATAGCAGAAGGTTAAGTAATTTCTTATGTATAGTTAAACTAAAGCAGTACTTCAGTGGGACTT-ACAAGTATTTTTTCATCACTGAAAGG--TTTTTTTTTA-ATCACTA---AATTGTATTTGGCA---ATTG---CAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGG-TAAtgtgtgtgcgtgtgtgc----gtgtgtgtgtgtgc--gcg--------cgcgtgtATCTCTTTCCTCCTTTCTTTTGGGGAATCCTGTAATA-------TGAGGTAGCTTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34665439 306 + 59248254 AAGGCTCATCTTAAAACATGAGCATTAAATCTATTTGGAATAGCAGAAGGTTAAGTAATTTCTTATGTATAGTTAAACTAAAGCAGTACTTCAGTGGGACTT-ACAAGTATTTTTTCATCACTGAAAGG--TTTTTTTTTA-ATCACTA---AATTGTATTTGGCA---ATTG---CAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGG-TAAtgtgtgtgcgtgtgtgc----gtgtgtgtgtgtgc--gcg--------cgcgtgtATCTCTTTCCTCCTTTCTTTTGGGGAATCCTGTAATA-------TGAGGTAGCTTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4531971 296 - 13342542 AAGGCTCATCTTAAAACATGAGCATTAAATCTATTTGGAATAGCAGAAGGTTAAGTAATTTCTTATGTATAGTTAAACTAAAGCAGTACTTCAGTGGGACTT-ACAAGTATTTTTTCATCACTGAAAGG--TTTTTTTTTA-ATCACTA---AATTGTATTTGGCA---ATTG---CAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGG-TAAtgtgtgtgc--------------gtgtgtgtgtgc--gcg--------cgcgtgtATCTCTTTCCTCCTTTCTTTTGGGGAATCCTGTAATA-------TGAGGTAGCTTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5462194 306 + 7714307 AAGGCTCATCTTAAAACATGAGCATTAAATCTATTTGGAATAGCAGAAGGTTAAGTAATTTCTTATGTATAGTTAAACTAAAGCAGTACTTCAGTGGGACTT-ACAAGTATTTTTTCATCACTGAAAGG--TTTTTTTTTA-ATCACTA---AATTGTATTTGGCA---ATTG---CAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGG-TAAtgtgtgtgcgtgtgtgc----gtgtgtgtgtgtgc--gcg--------ggcgtgtATCTCTTTCCTCCTTTCTTTTGGGGAATCCTGTAATA-------TGAGGTAGCTTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29268310 308 + 50890351 AAGGCTCATCTTAAAACATGAGCATTAAATCTATTTGGAATAGCAGAAGGTTAAGTAATTTCTTATGTATAGTTAAACTAAAGCAGTACTTCAGTGGGACTT-ACAAGTATTTTTTCATCACTGAAAGG--TTTTTTTTTA-ATCACTA---AATTGTATTCGGCA---ATTG---CAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGG-TAAtgtgtgggcgtgtgtgc--gtgtgtgtgtgtgtgc--gcg--------cgtgtgtATCTCTTTCCTCCTTTCTTTTGGGGAATCCTGTAATA-------TGAGGTAGCTTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 893323 305 - 2385121 AAGGCTCATCTTAAAACATGAGCATTAAATCTATTTGGAATAGCAGAAGGTTAAGTAATTTCTTATGTATAGTTAAACTAAAGCAGTACTTCAGTGGGACTT-ACAAGTATTTTTTCATCACTGAAAGG---TTTTTTTTA-ATCACTA---AATTGTATTTGGCA---ATTG---CAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGG-TAAtgtgtgtgcgtgtgtgc----gtgtgtgtgtgtgc--gcg--------cgcgtgtATCTCTTTCCTCCTTTCTTTTGGGGAATCCTGTAATA-------TGAGGTAGCTTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2333616 304 + 4274983 AAGGCTCATCTTAAAACATGAGCATTAAATCTATTTGGAATAGCAGAAGGTTAAGTAATTTCTTATGTATAGTTAAACTAAAGCAGTACTTCAGTGGGACTT-ACAAGTATTTTTTCATCACTGAAAGGTTTTTTTTTTTA-ATCACTA---AATTGTATTTGGCA---ATTG---CAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGG-TAAtgtgtgtgcgtgtgtgc--------gtgtgtgtgt--gcg--------cgcgtgtATCTCTTTCCTCCTTTCTTTTGGGGAATCCTGTAATA-------TGAGGTAGCTTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28564476 293 + 49145316 AAGGCTCATCTTACAACATGAGCATTAAATATATTTGGAATAGCCGAAGCTTAAGTAATTTCTTATATATAGTTAAACTAAAGCAGTACTTGAGTGGGACTT-ACAAGTATTTTTTCATCACTGAAAGG-----TTTTTTT-ATCACTA---AATTGTATTTGGCA---ATTG---CAAGTTGCCTACGGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAAG-Ttgtg----------tgcgt----gtgtgtatgtgtgc--gtg--------tgtgtgtATCTTTTTCCTCCTTTCTTTTGGGGAACCCTGTAATA-------TGAGGTAGCTTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5411092 306 + 8899380 AAGGCTCATCTTACAACATGAGCATTAAATATATTTGGAATAGTCAAAGCTTAAGTAATTTCTTATGTATAGTTAAACTAAAGCAGTACTTCAGTGGGACTT-ACAAGTATTTTTTCATCACTGAAAGG----TTTTTTTT-ATCACTA---AATTGTATTTGGCA---ATTG---CAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGG-Ttgtgtgtgtatgtctgcgt----gcgtgtatgtgtgcgtgtg--------tgtgtgtATCTTTTTCCTCCTTTCTTTTGGGGAATCCTGTAATA-------TGAGGTAGCTTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1615760 304 - 2680843 AAGGCTCATCTTACAACATGAGCATTAAATATACTTGGAATAGCCGAAGCTTAAGTAATTCCTTATGTATAGTTAAACTAAAGCAGTACTTCAGTGGGACTT-ACAAGTATTTTTTCATCACTGAAAGG----TTTTTTTT-ATCACTA---AATTGTATTTGGTA---GTTA---CAAGTTGCCTGCAGATAGAGCCGTGATACTGTGTTTTGAGCCACAGAAGG-Ttgtgtgtgtgtgtgcgcgt----gtgtgtatgtgtgc--gtg--------tgtgtgtgtCTTTTTCCTCCTTTCTTTTGGGGAATCCTGTAATA-------TGAGGTAGCTTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 365876 303 - 4471408 AAGGCTCATCTTACAACATGAGCATTAAATATATTTGGAATAGCTGAAGCTTAAGTAATTTCTTACGTATAGCTAAACTAAAGCAGTACTTCAGTGGGACTT-ACAAGTATTTTTTCATCACTGAAAGG-----TTTTTTT-ATCACTA---AATTGTATTTGGCA---ATTG---CAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGG-Ttgtgtgtgtatgtgtgcgt----gtatgtatgtgtgc--gta--------tgtgtgtATCTTTTTCCTCCTTTCTTTTGGGGAATCCCATAATA-------TGAGGTAGCTTA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5482480 290 + 5549422 AAGGCTCATCTTAAAAAATGAGCATTAAATATATTTGGAATAGCAGAAGGTTAAGTAATTTCTTATGTATAGTTAAACTAAAGCAGTACTTCAATGGGACTT-ATAAGTATTTTTTCATCACTGAAAGG---ATTTTTTTT-ATCACTA---AATTGTATTTGGCAATGATTG---CAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGA-TT----------------------GTGTGCGTGCGTGC--GTG--------TGTATCTCTATCTCTCTCTCTCTCTTTTGGGAAATCCTGTAATT-------TGAGATAGCTTA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111095700 308 - 145441459 AAGGCTCGTCTTAAAACACAAGTA-TAAGTGTATGTGGAGTAGCAGATGGTT--GTGATTCCTTGTTTAGAGTTGAACTAAAGC--CAGCTAAATGGAACTG-CTAAGTATTTTTTCATCACTGAAAGG----ATTTTCTT-ATCACTAATTAATTGTATTCGGCA---ATTACTTCCAATTGCCTGCAGATAG-GCCGTGATACTGTGTTTTGAGCCACAGAAGG-TTTTGTGcgtgtgtgtgtgtatgtatgtgtgtgtgcgc--gcg--------cgcgtgtatgtgcgtgtctttTTCTTTTTGGAGATCCTATAATA-------TGAGGTAGCTTA i mm10.chr7 C 0 C 0 s canFam3.chr1 4615221 307 - 122678785 AAGGCTCATCTTTAAAAATGAGCATTAAATATATTTGGAATAGCAGAAGGTTAAGTAATTTCTTATGTATAGTTAAACTACAGCAGTACTTCAATGGGACTT-ATAAGTATTTTTTCATCACTGAAAGG---AGTTTTCTT-ATCACTA---AATTGTATTTGGCAATTATTG---TAAGTTGCCTGCAGATAGGGCCGTGATACTGTGTTTTGAGCCACAGAAGG-Ttgtgtgtatga------------gtgtgtatgcgtgc--gtg--------cgtgcgtgtCTCTTTCTTTCTTTCTTTTTGGAAATCCTGTAATATCCCTTTTGAGGTAGCTTA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 576130 3945 + 2501019 M e micMur3.chr22 3960680 2901 - 30143674 I e dasNov3.JH563638 340744 2 + 643850 I a score=412590.000000 s hg38.chr19_GL383574v1_alt 75634 24 + 155864 TTTCGTCAATTAATTAGGGTGCTG s panTro5.chr19 36144204 24 + 61309027 TTTCGTCAATTAATTAGGGTGCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39890403 24 + 64411610 TTTCGTCAATTAATTAGGGTGCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6308000 24 - 8369475 TTTCGTCAATTAATTAGGGTGCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63900557 24 - 106955855 TTTCGTCAATTAATTAGGGTGCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30212020 24 + 53671032 TTTCGTCAATTAATTAGGGTGCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34665745 24 + 59248254 TTTCGTCAATTAATTAGGGTGCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4532267 24 - 13342542 TTTCGTCAATTAATTAGGGTGCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5462500 24 + 7714307 TTTCGTCAATTAATTAGGGTGCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29268618 24 + 50890351 TTTCGTCAATTAATTAGGGTGCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 893628 24 - 2385121 TTTCGTCAATTAATTAGGGTGCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2333920 24 + 4274983 TTTCGTCAATTAATTAGGGTGCTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28564769 24 + 49145316 TTTCGTCAGTTAATTAGGGTGCTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5411398 24 + 8899380 TTTCGTCAGTTAATTAGAGTGCTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1616064 24 - 2680843 TTTCGTCAGTTAATTAGGGTGCTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 366179 24 - 4471408 TTTCGTCAGTTAATTAGGGTGCTG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 580075 24 + 2501019 TTTCGTCAATTAATTAGGGTGCTG i proCoq1.NW_012149263v1 M 3945 C 0 s otoGar3.GL873654 5482770 24 + 5549422 TTTCGTCAATTAATTAGGGTGCTG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111096008 24 - 145441459 TTTCGACACTTAATTAGGGTGCTG i mm10.chr7 C 0 C 0 s canFam3.chr1 4615528 24 - 122678785 TTTCGTCAATTAATTAGGGTGCTG i canFam3.chr1 C 0 C 0 e micMur3.chr22 3960680 2901 - 30143674 I e dasNov3.JH563638 340744 2 + 643850 I a score=4633777.000000 s hg38.chr19_GL383574v1_alt 75658 247 + 155864 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCAACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGTGCTGAGCAGCAGCCTTATGGGTG--GGTCTTTTTT s panTro5.chr19 36144228 247 + 61309027 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCAACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGTGCTGAGCAGCAGCCTTATGGGTG--GGTCTTTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39890427 247 + 64411610 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCAACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGTGCTGAGCAGCAGCCTTATGGGTG--GGTCTTTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6308024 247 - 8369475 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCAACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGTGCTGAGCAGCAGCCTTATGGGTG--GGTCTTTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63900581 247 - 106955855 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCAACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGTGCTGAGCAGCAGCATTATGGGTG--GGTCTTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30212044 247 + 53671032 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCGACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGTGCTGAGCAGCAGCATTATGGGTG--GGTCTTTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34665769 247 + 59248254 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCGACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGTGCTGAGCAGCAGCATTATGGGTG--GGTCTTTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4532291 247 - 13342542 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCGACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGTGCTGAGCAGCAGCATTATGGGTG--GGTCTTTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5462524 247 + 7714307 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCGACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGTGCTGAGCAGCAGCATTATGGGTG--GGTCTTTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29268642 247 + 50890351 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCGACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGTGCTGAGCAGCAGCATTATGGGTG--GGTCTTTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 893652 247 - 2385121 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCGACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGTGCTGTGCAGCAGCATTATGGGTG--GGTCTTTTCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2333944 247 + 4274983 GATGGTAGAGAATTTTGTCAGTCAAATATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCGACTAATTTTTTAAAGAATAAACGTTTTAAAGTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGTGCTGAGCAGCAGCATTATGGGTG--GGGCTTTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28564793 247 + 49145316 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGACCTTTGTATAGCTGTATAAAAAGCAACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGCGCTGAACAGCAGCATTATGGGTG--GGTCTTTTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5411422 245 + 8899380 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACGTTAAGAACTTTGTATAGCTGTATAAAAAGCAACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGCGCTGAGCAGCAGCCTTATGGGTG--GGTC--TTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1616088 247 - 2680843 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCAACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACGTACTGTGTCCTTGCAGAAGTTGATGCGCTGAGCAGCAGCATTATGGGTG--GGTCTTTTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 366203 247 - 4471408 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACATA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCAACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACATACTGTGTCCTTGGAGAAGTTGATGCGCTGAGCAGCAGCATTATGGGTG--GGTCTTTTTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3963581 247 - 30143674 GATGGAAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCAACTAATTTTTTAAAGAATAAACATTTTAAACTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGTGCTGAGGAGCAGAGTCACGGGCG--GGCCTTTTTC i micMur3.chr22 I 2901 C 0 s proCoq1.NW_012149263v1 580099 247 + 2501019 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCAACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACGTACTGTGTCCTTGCAGAAGTCGATGTGCTGAGGAGCAGAGTCATGGGTG--GGTCTTTTTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5482794 247 + 5549422 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCAACTAATTTTTTACAGAATAAACATTTTAAAGTCAGCAAACATGCTGTGTCCTTGCAGAAGTTGATGTGCTGAGAAGCAGAGTTATGGGTG--GGTCTTTTTT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111096032 245 - 145441459 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACAGGTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCAACTAATTTTTTAAAGAATAAACGTTTTAAAGTCAGCAAACATAC-GTGTCCTTGCAGAAGTCAGTGTGCTGAGGAGCAGGGATATGGGTG--GGTC--TTTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4615552 249 - 122678785 GATGGTAGAGAATTTTGTCAGTCAACTATGTACACACA-GTAAATACTGTTTCTTAGGCAAAGGTAACTTTTTTATATAGTTGTAAAATTCCATTATATTCCATTGCCAAAGAAACATTAAGAACTTTGTATAGCTGTATAAAAAGCAACTAATTTTTTAAAGAATAAACATTTTAAAGTCAGCAAACATACTGTGTCCTTGCAGAAGTTGATGTGCTGAGGAGGAGAGCTATGGGTGGTGGGTCTTTTT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 340744 2 + 643850 I a score=19837127.000000 s hg38.chr19_GL383574v1_alt 75905 1152 + 155864 TC-TTAGTTTTCCAGGCTTAACA-T------T--TTT-GATTTTG----------TTT--------------TTT-AATGTTTGGAACATAAATGAAGA--TTTGAT-ACATTATTTCA-TTATCT--AAAAAGGATTAATTATTCATGCTCATTGTAAG---AACTTCATTTTGTAGCAAATGGCATATCACAGGATCTGTCCAGATAATC-GATATTTTCAGTATACAAATGTAAATAATCAC-AGATGAGAATGTACTTAGCTGTATTTTCAAATAAGTAATCTT--CCCCCCTTTTGT------------AGGACTTTAAAACT--AGGCATCAATGAACCTGTTTTTCCTATTATGCCTGGA-------ATTTAGTCATGAT-ACC--TTGACTCATTCCATCATATTTCAAGAGGATTCAGAGTGCTAGAAATT---ATTTTGGTAGCCTGT--AACACACGGCAACACTGGTCCTTGGGCCTATGATGACCCACAGATGACTCAGT-ATAGAGTTCATTGCTAATTATAAATTACTAGTGAATC-TTTTTGATATTTTAAGCTCTAGTGG-G---AAAAATCTGGCCACTTT-TGTGTTTTT-ATGAAGGCCATGGAATAAAAGGATCCAAAGATTTAAATATTTTTATCTAATATTTTGATTGTTTT-CTTAACTTTCTCCTTAAAACATTCAGTAGTGATAAAGATA---TA-GAAAC-TGCACTGTAGGAGAATTGGAATATTTAAGGCTGGTTGACATTTTTTATTTT-CATTTTATATCTTTTGTATAGCTCTACAAGGCAGTGTTTTGTAATTTGGTTTCATTATGAAGATCCAGTACTTGGCAGCCATAG-TTTAG-ACAATATTGTTCAGTGCTGTTTGCTTGCATGTTAACAACAAAACCTTTTAGAGGACCCACAAATCATGATATTGAACACAGTTCCGAGGCA-TTCAGAGCATCAGAGCAAGTACCATG-GCAATACATGTGTAGACTGTTGGAGATGTCCCGGGCCAATTTCAAGAAAGAAAAC-TGTAAATACTAGTTCTACTTGCTCTGAAATTATGAGTTTATGCGTTTTCCCAGCCC----TCCGAATCACTGACTGGGGCGTTTTGTGCCCCAGCAATAACTGGCAGCATGGCATACCTGCAGTACCCCTTACAATATTAAAGCAAAGTTTTTATTCTAAAACAGAATAAAACTGTTCAAT-AAAAAATGCTCGTCAAAGTTCTTTCTC s panTro5.chr19 36144475 1150 + 61309027 TC-TTAGTTTTCCAGGCTTAACA-T------T--TTT-GATTTTG----------TTT--------------TTT-AATGTTTGGAACATAAATGAAGA--TTTGAT-ACATTATTTCA-TTATCT--AAAAAGGATTAA----TCATGCTCATTGTAAG---AACTTCATTTTGTAGCAAATGGCATATCACAGGATCTGTCCAGATAATC-GATATTTTCAGTATACAAATGTAAATAATCAC-AGATGAGAATGTACTTAGCTGTATTTTCAAATAAGTAATCTT-CCCCCCCTTTTGT------------AAGACTTTAAAACT--AGGCATCAATGAACCTGTTTTTCCTATTATGCCTGGA-------ATTTAGTCATGAT-ACC--TTGACTCATTCCATCATATTTCAAGAGGATTCAGAGTGCTAGAAATT---ATTTTGGTAGCCTGT--AACACACGGCAACACTGGTCCTTGGGCCT---ATGACCCACAGATGACTCAGT-ATAGAGTTCATTGCTAATTATAAATCACTAGTGAATC-TTTTTGATATTTTAAGCTCTAGTGG-G---AAAAATCTGGCCACTTT-TGTGTTTTT-ATGAAGGCCGTGGAATAAAAGGATCCAAAGATTTAAATATTTTTATCTAATATTTTGATTGTTTT-ATTAACTTTCTCCTTAAAACATTCAGTAGTGATAAAGATA---TA-GAAAC-TGCACTGTAGGAGAATTGGAATATTTAAGGCTGGTTGACATTTTTTATTTT-AATTTTATATCTTTTGTATAGCTCTACAAGGCAGTGTTTTGTAATTTGGTTTCATTATGAAGATCCAGTACTTGGCAGCCGTAG-TTGAG-ACAATATTGTTGAGTGCTGTTTGCTTGCATGTTAACCACAAAGCCTTTTAGAGGACCCACAAATCATGATATTGAACACAGTTCTGAGGCG-TTCAGAGCATCAGAGCAAGTACCATG-GCAACACATGTGTAGACTGTTGGAGATGTCCCGGGCCAATTTCAAGAAAGAAAAC-TGTAAATACTAGTTCTACTTGCTCTGAAATTATGAGTTTATGCGTTTTCCCAGCCCTCCGTCCGAATCACTGACTGGGGCGTTTTGTGCCCCAGCAATAATTGGCAGCATGGCATACCTGCAGTACACCTTACAATATTAAAGCAAAGTTTTTATTCTAAAACAGAATAAAACTGTTCAAT-AAAAAATGCTCGTCAAAGTTCTTTCTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39890674 1150 + 64411610 TC-TTAGTTTTCCAGGCTTAACA-T------T--TTT-GATTTTG----------TTT--------------TTT-AATGTTTGGAACATAAATGAAGA--TTTGAT-ACATTATTTCA-TTATCT--AAAAAGGATTAA----TCATGCTCATTGTAAG---AACTTCATTTTGTAGCAAATGGCATATCACAGGATCTGTCCAGATAATC-GATATTTTCAGTATACAAATGTAAATAATCAC-AGATGAGAATGTACTTAGCTGTATTTTCAAATAAGTAATCTT-CCCCCCCTTTTGT------------AAGACTTTAAAACT--AGGCATCAATGAACCTGTTTTTCCTATTATGCCTGGA-------ATTTAGTCATGAT-ACC--TTGACTCATTCCATCATATTTCAAGAGGATTCAGAGTGCTAGAAATT---ATTTTGGTAGCCTAT--AACACACGGCAACACTGGTCCTTGGGCCT---ATGACCCACAGATGACTCAGT-ATAGAGTTCATTGCTAATTATAAATCACTAGTGAATC-TTTTTGATATTTTAAGCTCTAGTGG-G---AAAAATCTGGCCACTTT-TGTGTTTTT-ATGAAGGCCGTGGAATAAAAGGATCCAAAGATTTAAATATTTTTATCTAATATTTTGATTGTTTT-ATTAACTTTCTCCTTAAAACATTCAGTAGTGATAAAGATA---TA-GAAAC-TGCACTGTAGGAGAATTGGAATATTTAAGGCTGGTTGACATTTTTGATTTT-AATTTTATATCTTTTGTATAGCTCTACAAGGCAGTGTTTTGTAATTTGGTTTCATTATGAAGATCCAGTACTTGGCAGCCGTAG-TTGAG-ACAATATTGTTGAGTGCTGTTTGCTTGCATGTTAACCACAAAGCCTTTTAGAGGACCCACAAATCATGATATTGAACACAGTTCTGAGGCG-TTCAGAGCATCAGAGCAAGTACCATG-GCAACACATGTGTAGACTGTTGGAGATGTCCCGGGCCAATTTCAAGAAAGAAAAC-TGTAAATACTAGTTCTACTTGCTCTGAAATTATGAGTTTATGCGTTTTCCCAGCCCTCCGTCCGAATCACTGACTGGGGCGTTTTGTGCCCCAGCAATAATTGGCAGCATGGCATACCTGCAGTACACCTTACAATATTAAAGCAAAGTTTTTATTCTAAAACAGAATAAAACTGTTCAAT-AAAAAATGCTCGTCAAAGTTCTTTCTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6308271 1143 - 8369475 TC-TTAGTTTTCCAGGCTTAACA-T------T--TTT-GATT-------------TTT--------------TTT-AATGTTTGGAACATAAATGAAGA--TTTGAT-ACGTTATTTCA-TTATCT--AAAAAGGATTAATTATTCATGCTCATTGTAAG---AACTTCATTTTGTAGCAAATGGCATATCACAGGATCTGTGCAGATAATC-GATATTTTCAGTATACAAATGTAAATAATCAC-AGATGAGAATGTACTTAGCTGTATTTTCAAAGAAGTAATCTTCCCCCCCCTTTTGT------------AGGACTTTAAAACT--AGGCATCAATGAACCTGTTTTTCCTATTATGCCTGGA-------ATTTAGTCATGAT-ACC--TTGACTCATTCCATCATATTTCAAGAGGATTCAGAGTGCTAG--ATT---ATTTTGGTAGCCTGT--AACACACGGCCACACTGGTCCTTGGGCCT---ATGACCCACAGATGACTCAGT-ATAGAGTTCATTGCTAATTATAAATTACTAGTGAATC-TTTTTGATATTTTAAGCTCTAGTGG-G---AAAAATCTGGCCACTTT-TGTGTTTTT-ATGAAGGCCATGGAATAAAAGGATCCAAAGATTTAAATATTTTTATCTAATATTTTGATCGTTTT-ATTAACTTTCTCCTTAAAGCATTCAGTAGTGATAAAG--A---TA-GAAAC-TGCACTGTAGGAGAATTGGAATATTTAAGGCTGGTTGACATTTTTTATTTT-AATTTTATATCTTTTGTATAGCTCTACAAGGCAGTGTTTTGTAATTTGGTTTCATTATGAAGATCCAGTACTTGGCAGCCATAG-TTTAG-ATGATATTGTTTAGTGCTGTTTGCTTGCATGTTGACAACAAAACCTCTTAGAGGGCCCACAAATCATGATGTTGAACACAGTTCTGAGGCA-TTCAGAGCATCAAAGCAAGTACCATG-GCAGTACATGTGTAGACTGTTTGAGATGTCCCAGGCCAATTTCAAGAAAGAAAAC-TGTAAATACTAGTTCTACTTGCTCTGAAATTATGAGTTTATGCGTTTTCCCAGCCC----TCCGAATCACTGACTGGGGCGTTTTGTGCCCCAGCAATAACTGGCAGCATGGCATACCTGCAGTACACCTTACAATATTAAAGCAAAGTTTTTATTCTAAAACAGAATAAAACTGTTCAAT--AAAAATGCTCGTCAAAGTTCTTTCTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63900828 1150 - 106955855 TC-TTAGTTTTCCAGGCTTAACA-T------G--TTT-GATTTTG----------TTT--------------TTT-AATGTTTAGAACATAAATGAAGA--TTTGAT-CCATTCTTTCA-TTATCT--AAAAAGGATTAATTATTCATGCTCATTGTAAG---AACTTCATTTTGTAGCAAATGGCATATCACAGGATCTGTCCAGATAATC-GATATTTTCAGTATACAAATGTAAATAATCAC-AGATGAGAATGTACTTAGCTGTATTTTCAAATAAGTAATCTT-CCCCCTCTTTTTT------------AGGACTTTAAAACT--AGGCATCAATGAACCTGTTTTTCCTATTATGCCTGGA-------ATTTAGTCATGAT-ACC--TTGACTCATTCCATCATATTTCAAGAGGATTCAGAGTGCTAGAAATT---ACTTTGGTAGCCTAT--AACACACGGCAACACTGGTCCTTGGGCCT---ATGACCCACAGATGACTCAGT-ATAGAGTTCATTGCTAATTATAAATTACTAGTGAATC-TTTTTGATATTTTAAGCTCTAGTGG-G---AAAAATCTGGCCACTTT-TGTGTTTTT-ATGAAGGCCATGGAATAAAAGGATCCAAAGATTTAAATATTTTTATCTAATATTTTGATTGTTTT-ATTAACTTTCTCCTTAAAACATTCAGTAGTGATAAAGATA---TA-GAAAC-TGCACTGTAGGAGAATTGGAATATTTAAGGCTGGTTGACATTTTTTATTTT-AATTTTATATCTTTTGTATAGCTCTACAAGGCAGTGTTTTGTAATTTGGTTTCATTATGAAGATCCAGTACTTGGCAGCCATAG-TTTAG-ATAATATTGTTTAGTGCTGTTTGCTTGCATGTTAACAACAAAACCTTTTAGAGGACCCACAAATCATGATATTGAACACATTTCTGAGGCA-TTCAGAGCATCAAAGCAAGTACCATG-GCAATACATGTGTAGACTGTTTGAGTTGTCCCAGGCCAATTTCAAGAAAGAAAAC-TGTAAATACTAGTTCTACTTGCTCTGAAATTATGAGTTCATGCGTTTTCCCAGCCC----TCCAAATCACTGACTGGGGCGTTTTGTGCCCCAACAATAACTGGCAGCATGGCATACCTGCAGTACACCTTACAATATTAAAGCAAAGTTTTTATTCTAAAACAGAATAAAACTATTCAAT-AAAAAATGCTCGTCAAAGTTCTTTCTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30212291 1150 + 53671032 TC-TTAGTTTTCCAGGCTTAACA-T------T--TTT-GATTTTG----------TTT--------------TTT-AATGTTTGGAACATAAATGAAGA--TTTGAT-ACATTCTTTCG-TTATCT--AAAAAGGATTGATTATTCATGCTCATTGTAAG---AACTTCATTTTGTAGCAAATGGCATATCACAGGATCTGTCCAGATAATC-GATATTTTCAGTATACAAATGTAAATAATCAT-AGATGAGAATGTACTTAGCTGTATTTTCAAATCAGTAATCCT-CCCCACCTTTTTT------------AGGACTTTAAAACT--AGGCATCAATGAATCTGTTTTTACTATTATGCCTGGA-------ATTTAGTCATGAT-ACC--TTGACTCATTCTGTCATATTTCAAGAGGATTCAGAGTCCTTGAAATT---ACTTTGGCAGCCTGT--AACACATGGCAACACTGGTCCTTGGGCCT---GTGACCCACAGATGACTCAGT-ATAGAGTTCGTTGCTAATTATAAATTACTAGTGAATC-TTTTTGATATTTTAAGCTCTAGTGG-G---AAAAATCTGGCCACTTT-CGTGTTTTT-ATGAAGGCCATGGAATAAAAGGATCCAAAGATTTAAATATTTTTATCTAATATTTTGATTGTTTT-ATTAACTTTCTCCTTAAAACATTCAGTAGTGATAAAGATA---CA-GAAAC-TGCACTGTAGGAGAATTGGAATATTTAAGGCTGGTTGATATTTTTTATTTT-AATTTTATATCTTTTGTATAGCTCTACAAGGCAGTGTTTTGTAATTTGGTTTCATTATTAAGATCCAGTACTTGGCAGCCATAG-TTTAG-ATAATATTGTTTAGTGCTGTTTGTTTGCATGTTAACAACAAAACCTTTTAGAGGACCCACAAATCATGATATTGAACACATTTCTGAGGCA-TTCAGAGCATCAAAGCAAGTACCATG-GCAATACATGTGTAGACTGTTTGAGATGTCCCAGGCCAATTTCAAGAAAGAAAAC-TGTAAATACTAGTTCTACTTGCTCCGAAAGTATGAGTTCATGCGTTTTCCCAGCCC----TCTGAATCACTGACTGGGGCGTTTTGTGCCCCAACAAAAACTGGCAGCATGGCATACCTGCAGCACACCTTACAATATTAAAGCAAAGTTTTTATTCTAAAACAGAATAAAACTGTTCAAT-AAAAAATGCTCGTCAAAGTTCTTTCTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34666016 1150 + 59248254 TC-TTAGTTTTCCAGGCTTAACA-T------T--TTT-GATTTTG----------TTT--------------TTT-AATGTTTGGAACATAAATGAAGA--TTTGAT-ACATTCTTTCG-TTATCT--AAAAAGGATTGATTATTCATGCTCATTGTAAG---AACTTCATTTTGTAGCAAATGGCATATCACAGGATCTGTCCAGATAATC-GATATTTTCAGTATACAAATGTAAATAATCAT-AGATGAGAATGTACTTAGCTGTATTTTCAAATCAGTAATCCT-CCCCACCTTTTTT------------AGGACTTTAAAACT--AGGCATCAATGAATCTGTTTTTACTATTATGCCTGGA-------ATTTAGTCATGAT-ACC--TTGACTCATTCTGTCATATTTCAAGAGGATTCAGAGTCCTTGAAATT---ACTTTGGCAGCCTGT--AACACACGGCAACACTGGTCCTTGGGCCT---GTGACCCACAGATGACTCAGT-ATAGAGTTCGTTGCTAATTATAAATTACTAGTGAATC-TTTTTGATATTTTAAGCTCTAGTGG-G---AAAAATCTGGCCACTTT-CGTGTTTTT-ATGAAGGCCATGGAATAAAAGGATCCAAAGATTTAAATATTTTTATCTAATATTTTGATTGTTTT-ATTAACTTTCTCCTTAAAACATTCAGTAGTGATAAAGATA---CA-GAAAC-TGCACTGTAGGAGAATTGGAATATTTAAGGCTGGTTGATATTTTTTATTTT-AATTTTATATCTTTTGTATAGCTCTACAAGGCAGTGTTTTGTAATTTGGTTTCATTATTAAGATCCAGTACTTGGCAGCCATAG-TTTAG-ATAATATTGTTTAGTGCTGTTTGTTTGCATGTTAACAACAAAACCTTTTAGAGGACCCACAAATCATGATATTGAACACATTTCTGAGGCA-TTCAGAGCATCAAAGCAAGTACCATG-GCAATACATGTGTAGACTGTTTGAGATGTCCCAGGCCAATTTCAAGAAAGAAAAC-TGTAAATACTAGTTCTACTTGCTCCGAAAGTATGAGTTCATGCGTTTTCCCAGCCC----TCTGAATCACTGACTGGGGCGTTTTGTGCCCCAACAAAAACTGGCAGCATGGCATACCTGCAGCACACCTTACAATATTAAAGCAAAGTTTTTATTCTAAAACAGAATAAAACTGTTCAAT-AAAAAATGCTCGTCAAAGTTCTTTCTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4532538 1150 - 13342542 TC-TTAGTTTTCCAGGCTTAACA-T------T--TTT-GATTTTG----------TTT--------------TTT-AATGTTTGGAACATAAATGAAGA--TTTGAT-ACATTCTTTCG-TTATCT--AAAAAGGATTGATTATTCATGCTCATTGTAAG---AACTTCATTTTGTAGCAAATGGCATATCACAGGATCTGTCCAGATAATC-GATATTTTCAATATACAAATGTAAATAATCAT-AGATGAGAATGTACTTAGCTGTATTTTCAAATCAGTAATCCT-CCCCACCTTTTTT------------AGGACTTTAAAACT--AGGCATCAATGAATCTGTTTTTACTATTATGCCTGGA-------ATTTAGTCATGAT-ACC--TTGACTCATTCTATCATATTTCAAGAGGATTCAGAGTCCTTGAAATT---ACTTTGGCAGCCTGT--AACACACGGCAACACTGGTCCTTGGGCCT---GTGACCCACAGATGACTCAGT-ATAGAGTTCGTTGCTAATTATAAATTACTAGTGAATC-TTTTTGATATTTTAAGCTCTAGTGG-G---AAAAATCTGGCCACTTT-CGTGTTTTT-ATGAAGGCCATGGAATAAAAGGATCCAAAGATTTAAATATTTTTATCTAATATTTTGATTGTTTT-ATTAACTTTCTCCTTAAAACATTCAGTAGTGATAAAGATA---CA-GAAAC-TGCACTGTAGGAGAATTGGAATATTTAAGGCTGGTTGATATTTTTTATTTT-AATTTTATATCTTTTGTATAGCTCTACAAGGCAGTGTTTTGTAATTTGGTTTCATTATTAAGATCCAGTACTTGGCAGCCATAG-TTTAG-ATAATATTGTTTAGTGCTGTTTGTTTGCATGTTAACAACAAAACCTTTTAGAGGACCCACAAATCATGATATTGAACACATTTCTGAGGCA-TTCAGAGCATCAAAGCAAGTACCATG-GCAATACATGTGTAGACTGTTTGAGATGTCCCAGGCCAATTTCAAGAAAGAAAAC-TGTAAATACTAGTTCTACTTGCTCCGAAAGTATGAGTTCATGCGTTTTCCCAGCCC----TCTGAATCACTGACTGGGGCGTTTTGTGCCCCAACAAAAACTGGCAGCATGGCATACCTGCAGCACACCTTACAATATTAAAGCAAAGTTTTTATTCGAAAACAGAATAAAACTGTTCAAT-AAAAAATGCTCGTCAAAGTTCTTTCTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5462771 1151 + 7714307 TC-TTAGTTTTCCAGGCTTAACA-T------T--TTT-GATTTTG----------TTT--------------TTT-AATGTTTGGAACATAAATGAAGA--TTTGAT-ACATTCTTTCGTTTATCT--AAAAAGGATTGATTATTCATGCTCATTGTAAG---AACTTCATTTTGTAGCAAATGGCGTATCACAGGATCTGTCCAGATAATC-GATATTTTCAATATACAAATGTAAATAATCAT-AGATGAGAATGTACTTAGCTGTATTTTCAAATCAGTAATCCT-CCCCACCTTTTTT------------AGGACTTTAAAACT--AGGCATCAATGAATCTGTTTTTACTATTATGCCTGGA-------ATTTAGTCATGAT-ACC--TTGACTCATTCTATCATATTTCAAGAGGATTCAGAGTCCTTGAAATT---ACTTTGGCAGCCTGT--AACACACGGCAACACTGGTCCTTGGGCCT---GTGACCCACAGGTGACTCAGT-ATAGAGTTCGTTGCTAATTATAAATTACTAGTGAATC-TTTTTGATATTTTAAGCTCTAGTGG-G---AAAAATCTGGCCACTTT-CGTGTTTTT-ATGAAGGCCATGGAATAAAAGGATCCAAAGATTTAAATATTTTTATCTAATATTTTGATTGTTTT-ATTAACTTTCTCCTTAAAACATTCAGTAGTGATAAAGATA---TA-GAAAC-TGCACTGTAGGAGAATTGGAATATTTAAGGCTGGTTGATATTTTTTATTTT-AATTTTATATCTTTTGTATAGCTCTACAAGGCAGTGTTTTGTAATTTGGTTTCATTATTAAGATCCAGTACTTGGCAGCCATAG-TTTAG-ATAATATTGTTTAGTGCTGTTTGTTTGCATGTTAACAACAAAACCTTTTAGAGGACCCACAAATCATGATATTGAACACATTTCTGAGGCA-TTCAGAGCATCAAAGCAAGTACCATG-GCAATACATGTGTAGACTGTTTGAGATGTCCCAGGCCAATTTCAAGAAAGAAAAC-TGTAAATACTAGTTCTACTTGCTCCGAAAGTATGAGTTCATGCGTTTTCCCAGCCC----TCTGAATCACTGACTGGGGCGTTTTGTGCCCCAACAAAAACTGGCAGCATGGCATACCTGCAGCACACCTTACAATATTAAAGCAAAGTTTTTATTCTAAAACAGAATAAAACTGTTCAAT-AAAAAATGCTCGTCAAAGTTCTTTCTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29268889 1150 + 50890351 TC-TTAGTTTTCCAGGCTTAACA-T------T--TTT-GATTTTG----------TTT--------------TTT-AATGTTTGGAACATAAATGAAGA--TTTGAT-ACATTCTTTCG-TTATCT--AAAAAGGATTGATTATTCATGCTCATTGTAAG---AACTTCATTTTGTAGCAAATGGCATATCACAGGATCTGTCCAGATAATC-AATATTTTCAATATACAAATGTAAATAATCAT-AGATGAGAATGTACTTAGCTGTATTTTCAAATCAGTAATCCT-CCCCACCTTTTTT------------AGGACTTTAAAACT--AGGCATCAATGAATCTGTTTTTACTATTATGCCTGGA-------ATTTAGTCATGAT-ACC--TTGACTCATTCTATCATATTTCAAGAGGATTCAGAGTCCTTGAAATT---ACTTTGGCAGCCTGT--AACACACGGCAACACTGGTCCTTGGGCCT---GTGACCCACAGATGACTCAGT-ATAGAGTTCGTTGCTAATTATAAATTACTAGTGAATC-TTTTTGATATTTTAAGCTCTAGTGG-G---AAAAATCTGGCCACTTT-CGTGTTTTT-ATGAAGGCCATGGAATAAAAGGATCCAAAGATTTAAATATTTTTATCTAATATTTTGATTGTTTT-ATTAACTTTCTCCTTAAAACATTCAGTAGTGATAAAGATA---TA-GAAAC-TGCACTGTAGGAGAATTGGAATATTTAAGGCTGGTTGATATTTTTTATTTT-AATTTTATATCTTTTGTATAGCTCTACAAGGCAGTGTTTTGTAATTTGGTTTCATTATTAAGATCCAGTACTTGGCAGCCATAG-TTTAG-ATAATATTGTTTAGTGCTGTTTGTTTGCATGTTAACAACAAAACCTTTTAGAGGACCCACAAATCATGATATTGAACACATTTCTGAGGCA-TTCAGAGCATCAAAGCAAGTACCATG-GCAATACATGTGTAGACTGTTTGAGATGTCCCAGGCCAATTTCAAGAAAGAAATC-TGTAAATACTAGTTCTACTTGCTCCGAAAGTATGAGTTCATGCGTTTTCCCAGCCC----TCTGAATCACTGACTGGGGCGTTTTGTGCCCCAACAAAAACTGGCAGCATGGCATACCTGCAGCACACCTTACAATATTAAAGCAAAGTTTTTATTCTAAAACAGAATAAAACTGTTCAAT-AAAAAATGCTCGTCAAAGTTCTTTCTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 893899 1146 - 2385121 TC-TTAGTTTTCCAGGCTTAACA-T------T--TTT-GATTTTG----------TTT--------------TTT-AATGTTTGGAACATAAATGAAGA--TTTGAT-ACATTCTTTCG-TTATCT---AAAAGGATCGATTATTCATGCTCATTGTAAG---AACTTCATTTTGTAGCAAATGGCGTATCACAGGATCTGTCCAGATAATC-GATATTTTCAATATACAAATGTAAATAATCAT-AGATGAGAATGTACTTAGCTGTATTTTCAAATCAGTAATCCT-CCCCACCTTTTTT------------AGGACTTTAAAACT--AGGCATCAATGAATCTGTTTTTACTATTATGCCTGGA-------ATTTAGTCATGAT-ACC--TTGACTCATTCTATCATATTTCAAGAGGATTCAGAGTCCTTGAAATT---ACTTTGGCAGCCTGT--AACACACGGCAACACTGGTCCTTGGGCCT---GTGACCCACAGATGACTCAGT-ATAGAGTTCGTTGCTAATTATAAATTACTAGTGAATC-TTTTTGATATTTTAAGCTCTAGTGG-G---AAAAATCTGGCCACTTT-CGTGTTTTT-ATGAAGGCCATGGAATAAAAGGATCCAAAGATTTAAATATTTTTATCTAATATTTTGATTGTTTT-ATTAACTTTCTCCTTAAAACATTCAGTAGTGATAAAGATA---TA-GAAAC-TGCACTGTAGGAGAATTGGAATATTTAAGGCTGGTTGATATTTTTTATTTT-AATTTTATATCTTTTGTATAGCTCTACAAGGCAGTGTTTTGTAATTTGGTTTC---ATTAAGATCCAGTACTTGGCAGCCATAG-TTTAG-ATAATATTGTTTAGTGCTGTTTGTTTGCATGTTAACAACAAAACCTTTTAGAGGACCCACAAATCATGATATTGAACACATTTCTGAGGCA-TTCAGAGCATCAAAGCAAGTACCATG-GCAATACATGTGTAGACTGTTTGAGATGTCCCAGGCCAATTTCAAGAAAGAAAAC-TGTAAATACTAGTTCTACTTGCTCCGAAAGTATGAGTTCATGCGTTTTCCCAGCCC----TCTGAATCACTGACTGGGGCGTTTTGTGCCCCAACAAAAACTGGCAGCATGGCATACCTGCAGCACACCTGACAATATTAAAGCAAAGTTTTTATTCTAAAACAGAATAAAACTGTTCAAT-AAAAAATGCTCGTCAAAGTTCTTTCTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2334191 1151 + 4274983 TC-TTAGTTTTCCAGGCTTAACA-T------T--TTT-GATTTTG----------TTT--------------TTT-AATGTTTGGAACATAAATGAAGA--TTTGAT-CCATTCTTTCA-TTATCT--AAAAAGGATTGGTTATTCATGCTCATTGTAAG---AACTTCATTTTGTAGCAAATGACATATCACAGGATCTGTCCAGATAATC-GATATTTTCAGTATACAAATGTAAATAATCAT-AGATGAGAAGGTACTTAGCTGTATTTTCAAATCAGTAATCCT-CCCCACCTTTTTT------------AGGACTTTAAAACT--AGGCATCAATGAATCTGTTTTTCCTATTATGCCTGGA-------ATTTAGTCATGAT-ACC--TTGACTCATTCTATCATATTTCAAGAGGATTCAGAGTCCTTGAAATT---ATTTTGGCAGCCTGT--AACACACGGCAACACTGGTCCTTGGGCCT---ATGACCCACAGATGACTCAGT-ATAGAGCTCATTGCTAATTATAAATTACTAGTGAATC-TTTTTGATATTTTAAGCTCTAGTCG-G---AAAAATCTGGCCACTTT-CGTGTTTTT-ATGAAGGCCATGGAATAAAAGGATCCAAAGATTTAAATATTTTTATCTAATATTTTGATTGTTTT-ATTAACTTTCTCCTTAAAACATTCAGTAGTGATAAAGATA---TA-GAAAC-TGCACTGTAGGAGAATTGGAATATTTAAGGCTGGTTGATATTTTTTATTTT-AATTTTATATCTTTTGTATAGCTCTACAAGGCAGTGTTTTGTAATTTGGTTTCATTATTAAGATCCGGTACTTGGCAGCCGCAGTTTTAG-ATAATATTGTTTAGTGCTGTTTGCTTGCATGTTAACAACAAAACCTTTTAGAGGACCCACAAGTCATGATATTGAACACATTTCTGAGGCA-TTCAGAGCATCAAAGCAAGTACCATG-GCAATACATGTGTAGACTGTTTGAGATGTCCCAGGCCAATTTCAAGAAAGAAAAC-TGTAAATACTAGTTCTACTTGCTCCGAAAGTATGAGTTCATGCGTTTTCCCAGCCC----TCTGAATCACTGACTGGGGCGTTTTGTGCTCCAACAATAACTGGCAGCATGGCATACCTGCAGCACACCTTACAATATTAAAGCAAAGTTTTTATTCTAAAACAGAATAAAACTGTTCAAT-AAAAAATGCTCGTCAAAGTTCTTTCTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28565040 1143 + 49145316 TC-TTAGTTTTCCAGGCTTAACATT------T--TTT-GATTTTG----------TTT--------------TTT-AATGTTT-GAACATAAATGAAGA--TTTGAT-ACGTTATTTCA-TTATCT---AAAAGGGTAAATTATTCATGCTCATTGTAAG---AACTTTATTTTGTAGCAAATGGCATATCACAGGATCTGTCCAGATAATC-AATATTTTCAGTATACAAATGTAAATAGTCATAAGATGAGAATGTACTTAGCTGTATTTTCAAATAAGTAATCCT-TCCC-CCTTTTTT------------AGGACTTTAAAACT--AGGCATCAATGAACCTGTTTTTTCTATAATGCCTGGA-------ATTTAGTCATAAT-ACC--TTGACTCATTCCATCATATTTCAAGAGGATTCAGAATGTGAGGAATT---ATCTTGGCAGCCTGT--AACACATGGCACCACTGGTCCTTGGGCCT---GTGACCCACAGATGACTCAGT-ATAGAGTTCATTGTTAATTATAAACTACTAGTGAATC-TTTTTGATATTTTAAGCACTAGTGG-G---AAAAATCTGGCCACTTT-TGTGTTTTT-ATGAAGGCCATGGAATAAAAGGATCCAAAGATTTAAATATTTTTATC---TATTTTGATTTTTTTTGTTAACTTTCTCCTTAAAACATTCAGTAGTGATAAAGATG---TG-GAAAC-TGTACTGTAGGAGAATTGGAATATTTAAAGCTGGATGatattttttatttt-aattttatatcttttatatGGCTCTACAAGGCAATGTTTTGTAATTTGGTTTTATTATTAAGATTCAGTACTTGGCAGCCATAG-TTTAG-ATAATATTGTTTAGTGCTGTTTGCTTGCATGTTTACAACAAAACCTTTTAGAGCACCCACAAATCATGATATTGAACACATTTCTGAGGCA-TTCAGAGCATCAAAGCAAGTACTATG-ACAATACCTGTGTAGAC----TGAGATGTCCCAGGCGAATTTCAAGAAAGAAAAC-TGTAAATACTAGTTCTACTTGCTCTGAAAGTATGAGTTCACGCGTTTTCCCAACCC----TCTGAGTCACTGACTGGGGCATTTTGTGCCCCAACAATAACTGGCAGCATGGCATACCTGCAGTACACTTTACAATATTAAAGTAAGGTTTTTATTCTAAAACAGAATAAAACTGTTCAAT-AAAAAATGCTCGTCAAAGTTCTTTCTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5411667 1150 + 8899380 TC-TTAGTTTTCCAGGCTTAACATT------T--TTT-GATTTTG----------TTT--------------TTT-AATGTTT-GAACATAAATGAAGA--TTTGAT-ACGTTCTTTCA-TTATCTTAAAAAAATATAAATTATTCATGCTTATTGTAAG---AACTTCATTTTGTAGCAAACGGCATATCACAGGATCTGTCCAGATAATCAAATATTTTCGGTATAC-AATGTAAATAATCGTAAGATGAGAATGTACTTAGCTGTATTTTCAAATAAGTAATCCT-ACCC-CCTTTTTT------------AGGACTTTAAAACT--AGGCATCAATGAACCTGTTTTTCCTATAATGCCTGGA-------ATTTAGTCATGAT-ACC--TTGACTCATTCCATCATATTTCAAGAGGATTCAGAATGTGAGGAATT---ATCTTGGCAGCCTGT--AACACACGGCACCACTGGTCCTTGGGCCT---GTGACCCGCAGATGACTCAGT-ATAGAGTACATAGTTAATTATAAACTACTAGTGAATCTTTTTTGATATTTTAAGCACTAGTGG-G---AAAAATCTGGCCACTGT-TGTGTTTTT-ATGAAGGCCATGGAATAAAAGGATCCAAAGATTTAAATATTTTTATC---TATTTTGATTTTTTTGGTTAACTTTCTCCTTAAAACATTCAGTAGTGATAAAGATG---TG-GAAAC-TGTACTGTAGGAGAATTGGAATATTTAAAGCTGGTTGatattttttatttt-aattttatatcttttatataGCTCTACAAGGCAATGTTTTGTAATTTGGTTTCATTATTAAGGTTCAGTACTTGGCAGCCATAG-TTTAG-ATAATAACGTTTAGTGCTGTTTGCTTGCATGTTAACAACAAAACCTTTTAGAGCACCCACAAATCATGATATTGAACACATTTCTGAGGCA-TTCAGAGCATCAAAGCAAGTACTATG-ACAATACCTTTGTAGACTGTTTGAGATGTCCCAGGCGAATTTCAAGAAAGAAAACTTGTAAATACTAGTTCTACTTGCTCTGAAAGTATGAGTTCACGTGTTTTCCCAGCCC----TCTGAGTCACTGACTGGGGCATTTTGTGCCCCAACAATAACTGGCAGCATGGCATACCTGCAGT--ACTTTACAATATTAAAGCAAGGTTTTTATTCTAAAACAGAATAAAACTGTTCAAT-AAAAAATGCTCGTCAAAGTTCTTTCTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1616335 1146 - 2680843 TC-TTAGTTTTCCAGGCTTAATGTT------T--TTT-GATTTTG---------TTTT--------------TTT-AATGTTT-GAACATAAATGAAGA--TTTGAT-ACGTTCTTTCA-TTATCTAAAAAAATGATAAATTATTCATGCTCATTGTAAG---AACTTCATTTTGTAGCAAATGGCATATCACAGGATCTGTCCAGAT-----AATATTTTCAGTATACAAATGTAAATAATCATAAGATGAGAATGTACTTAGCTGTATTTTCAAATAAGTAAACCT-CCCC-CCTTTTTT------------AGGACTTTAAAACT--AGGCATCAATGAACCTGTTTTTCCTATAATGCCTGGA-------ATTTAGTCATGAT-ACC--TTGACTCATTCCATCATATTTCAAGAGGATTCAGAATGTGAGGAATT---ATCTTGGAAGCCTGT--AACACATGGCACTACCGGTCCTTGGGCCT---GTGACCCACAGATGACTCAGT-ATAGAGTTCATTGTTAATTATAAACTACTAGTGAATC-TTTTTGATATTTTAAGCACTCATGG-G---AAAAATCTGGCCACTTT-TGTGTTTTT-ATGAAGGCCATGGAATAAAAGGATCCAAAGATTTAAATATTTTTATC---TATTTTGATTTTTTTTGTTAACTTTCTCCTTAAAACATTCAGTAGTGATAAAGATG---TG-GAAAC-TGCACTGTTGGAGAATTGGAATATTTAAAGCTGGTTGATATTTTTTATTTT-AATTTTATATCTTTTATATAGCTCTACAAGGCAATGTTTTGTAATTTGGTTTCATTATTAAGATTCGGTACGGGGCAGCCATAG-TTTAG-ATAGTATCGTTTAGTGCTGTTTGCTTGCATGTTAACAACAAAACCTTTTAGAGCACCCACAAATCATAACATTGAACACATTTCTGAGGCA-TTCAGAGCATCAAAGCAAGTGCTATG-ACAACACCTGTGTAGACTGTTTGAGATGTCCCCGGCGAATTTCAAGAAAGAAAAC-TGTAAATACTAGTTCCACTTGCTCTGAAAGTATGAGTTCATGCGTTTTCCCAGCCC----TCTGAGTCACTGACTGGGGCATTTTGTGCCCCAACAATAACTGGCAGCATGGCATACCTG-AGTACACTTTACAATATTAAAGCAAGGTTTTTATTCTAAAACAGAATAAAACTGTTCAAT-AAAAAGTGCTCGTCAAAGTTCTTTCTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 366450 1149 - 4471408 CC-TTAGTTTTCCAGGCTTAACATT------T--TTT-GATTT------------TTT--------------TTT-AATGTTT-GAACATAAATGAAGA--TTTGAT-ACGTTCTTTCA-TTATCTAAAAAAAAGATAAATTATTCATGCTCATTGTAAG---AACTTCATTTTGTAGGAAACGGCATATCACAGGGTCTGTCCAGATAATC-AATATTTTCAGTATACAAATGTAAATAATCATAAGATGAGAATGTACTTAGCTGTATTTTCAAATAAGTAATCCT-CCCC-CCTTTTTT------------AGGACTTTAAAACT--AGGCATCAATGAACCTGTTTTTCCTATAATGCCTGGA-------ATTTAGTCATGAT-GCC--TTGACTCATTCCATCATATTTCAAGAGGATTCAGAATGTGAGGAGTT---ATCTTGGCAGCCTGT--AACACACGGCACCACTGGTCCTTGGGCCT---GTGACCCACAGATGACTCAGT-ATAGAGTTCATTGTTAATTATAAACTACTAGTGAATC-TTTCTGATATTTTAAGCACTAGTGG-G---AAAAATCTGGCCACTTT-TGTGTTTTT-ATGAAGGCCATGAAATAAAAGGATCCAAAGATTTAAATATTTTTATC---TATTTTGATTTTTTTTGTTAACTTTCTCCTTAAAACATTCAGTAGTGGTAAAGATG---TG-GAAAC-TGCACTGTAGGAGAATTGGAATATTTAAAGCTGATTGATATTTTTTATTTT-AATTTTATATCTTTTATATAGCTCTACAAGGCAATGTTTTGTAATTTGGTTTCATTATTAAGATTCAGTACTTGGCAGCCATAG-TTTAG-ATAATATCGTTTAGTGCTGTTTGCTTGCATGTTAACAACAAAACCTTTTAGAGCACCCACAAATCATGATATTGAACACATTTCTGAGCCA-TTCAGAGCATCAAAGCAAGTACTATG-ACAATACCTGTGTTGACTGTTTGAGATGTCCCAGGCGAATTTCAAGAAAGAAAAC-TGTAAATACTAGTTCTACTTGCTCTGAAAGTATGAGTTCACGTGTTTTCCCAGCCC----TCTGAGTCACTGACTGGGGCATTTTGTGCCCCAACAATAACTGGCAGCATGGCATACCTGCAGTACACTTTACAATATTAAAGCAAGGTTTTTATTCTAAAACAGAATAAAACTGTTTGATAAAAAAATGCTCGTCAAAGTTCTTTCTC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3963828 1145 - 30143674 CCTTCAGCTTTCTAGGCTTACGA-TA-----A--TTT-GATTTTT----------TTT--------------TTT-AATGTTTGGAACATAAATGAAGA--TTTGAT-ACATTCTTCCA-TTATCT--AAAAAGGATAACTTATTCATGCTTATTGTAAG---AACTTCATTTTATAGCAAGTGGCTTGTCACAGGATTTGTCCAAATAATA-GATATTTTCAGTATACAAATGTAAATAATCAT-AGATAAGAGTGTAATTAGTTGTATTTTCAAATAAATAACCCACCCTCCCCTTTTTT------------AGGACATTAAAACT--AGGCATCAATTAA-CTGTTCTTCCTTTTATGCCTGGA-------ATTTTGTCACGAT-ACC--TTGACTCATTCCGTCATATTTCAAGAAGATTCAGAGTGTTTGAAATT---ATTTTGGTAACCTGT--AACACAT---AACACTGGTCCTTGGGCCT---GTGACCCTCAAATGACTCAGT-GTAGAGTTCATTGCTAATTATAAGTTAGTAGTAAATC-TTTTTGATATTTTAAGCTATAGTGG-A---AAAAATCTGGCCACTCT-TTTGTTTTT-ATGAAGGCCATGGAATAAAGAGATCCAAAGATTTAAATATTTTTATC---TATTTTGAT--TTTT-GTTAACTTTCTCCTTAAAACATTAAGTAGTGATAAAGATG---TG-AAAAACTGCACTGTAGGAGAATTGGAATATTTAAAGATGGTTGGTATTTTTAATTTT-AATTTTATATCTTTTGTATAGCTCTACAAGGAAATGTTTTGTAATTTGGTTTCATTATTAAGATCCAGTACTTGGCAGCCATAG-TTTAG-CTAATATTGTTTAGTACTGTTTGCTTGCATGTTGACAACAAAACCTTTTGGAGGACCCACAAATCATGATACTGAACACATTTCTGAGACA-TTCTGAGCATCAAAGCAAGTGCTATG-GCAATACTTGTGTAGACTGCTTGAGATGTCCCAGGCCGATTCCAAAAAGAAAAAC-TGTAAATACTAGTTCTACATGCTCTGAAAGTATGAGTTCATGCGTTTTCCCAGCCC----TATGGGTCACTGGCTGGGGCGTTTGGTGCCCCAACAATAACTGGCAGCATGGCATACCTGCAGTGCACCTTACAATATCAAAGCAAGGTTTTTATTCTAAAACAGAATAAAACTATTCAAT-AAAAAATGTTCGTCAAAGTTCTTTCTC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 580346 1132 + 2501019 CC-TCAGCTTTCCAGGCTTAAGA-TA-----T--TTGAGGTTTTT----------TTT--------------TTT-AATATTTGGAACATAAATGAAGA--TTTGAT-ACATCCTTCCA-TTATCT--AAAAAGGATAAATTATTCATGCTTATTGTAAG---AACTTCATTTTGTAGCAAGTGGCTTATCACAGGATTTGTCCAAATAATA-GATATTTTCAGTATACGAATGTAAATAATCAT-AGATAAGAGTGTAATTAGTTGTATTTTCAAATAAGTAACCCA-CCTCTCCTTTTTT------------AGTACATTAAAACT--AGGCATCAATTAA-CTGTTCTTCTTATTATGCCTGGA-------ATTTTGTCACGAT-ACC--TGGATTCATTCCGTCATATTTCAAGAGGACTTGGAGTGTTTGAAATT---ATTTTGGCAATCTGTTGACAACAT---AACACTGGTCCCTGGGCCT---GTGACCCTCAAATGACTCAGT-ATAGAGTTCATTGCTACTTATAAATTACTGGTAAATC-TTTTTGATATTTTAAGCTATAGTGGAA---AAAAATCTGGCCACTCT-TTTGTTTTT-ATGAGGGCCATGGAATAAAGAGATCCAAAGATTTAAATATTTTTATC---TATTTTGAT-------------TTTCTCCTTAAAACATTAAGTAGTGATAAAGATG---TG-GAAAACTGCACTGTAGGAGAATTGGGATATTTAAAGATGGCTAATATTTTTAATTTT-AATTTTATATCTTTTGTATAGCTCTACAAGGAAATGTTTTGTAATTTGGTTTCATTATTAAGATCCAGTACTTGGCAGCCATAG-TTCAG-CTAATATTGTTTAGTACTGTTTGCTTGCATGTTAACAGCAAAACCTTTTGGAGGACCCACAAATCATGATACTGAACACA-TTCTGAGGCA-TTCTGAGCATCAAAGCAAGTGCT-TG-GCAATACTCGTGTAGACTGCTTGAGATGTCCCAAGCCGATGTCAAGAGGCAAAAC-TGTAAATACTAGTTCTACATGCTCTG-AAGTCTGAGTTCCTGCGTTTTCCCAGCCC----TGTGGGTCACGGGCTGGGCA--CTGGTGCCCCGATAGTAGCTGGCAGCACGGCATACCTGCAGCGCACCGCACGATATTAAAGCAAGGCTTTTCCTCTGAAACAGAATAAAACTGTTCAAT-AAGAAACGTTCGTCACAGTTCTTTCTC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5483041 1150 + 5549422 TC-TTAGCTTTCCAGGCTTAAGA-AAGAGATT--TTT-GATTTTT----------TTT--------------TTTAAATGTTTGGAACATAAATGAAGATTTTTGAT-ACATTCTTCCA-TTATCT--AAAAAGGATAAATTGTTCATGCTTATTGTAAG---AACTTCATTTTGTAGCAAGTGACTTATCACAGGATTTGTCCAAATAATA-GATATTTTCAGTATATGAATGTAAATAATCAT-AGATAAGACTGTAATTAGTTGTATTTTCAAATAAGTAACCCT-CCCTCTCTTTTTT------------AGTACAGTAAAACT--AGGCATCAATGAA-CTGTTACTCCTATTATGCCTGGA-------ATTTTGTCACGAC-ACC--TTGCCTCGTTCCATCCTATTTAAAGAGGATTCAGAGTGTTTGAAGTT---ATTTTGGCAACCTGT--AACACAT---CACTCTGTTCCTTGGGCCT---GTGACCCTCAAATGACTCAGT-ACAGAGTTCATTGCTAATTATAAATTACTAGTAAATC-TTTTTGATATTTTAAGCTATAGTGG-A---AAAAATTTGGCCACTTTCTTTGTTTTT-ATGAAGGCCATGGAATAAAGAGATCCAAAGATTTAAATATTTTTATC---TAGTTTGAT--TTTT-GTTAACTTTCTCCTTGAAACACTCAGTAGTGATAAAGATG---TG-GAAAA-TGCACTGTAGGAGAATTGGAATATTTAAAGATGGTTGATATTTCTAATTTT-AATTTTATATCTTTTGTATAGCTCTACAAGGAAATGTTTTGTAATTTGGTTTCATTACTAAGATCCAACACTTGGCAGCCATAG-TTTAGAATAACATTGTTTAGTACTGTTTGCTTGCATGTTAACAACAAAACCTTTTGGAGGACCCACAAATCATGATACTGAACACATTTCTGAGGCA-TTCTGAGCATCAGAGCAAGTGCTATG-GCAATACCTGTATAGACTGCTTGAGATGTCCCAGGCTGATTTCGAGAAGAAAAAC-TGTAAATACTAGTTCTACATGCTCTGAAAGTACGAGTT-ATGCG-TTTCCCAGCCC----TCTGGGTCACTGGCTGGGGCATCTGGTGCCCCAATAAAAACTGGCAGCATGGCATACCTGCAGTGCACCTTACAATATCAAAACAAAGTTTTTATTCTAAAGGAGAATAAAACTGTTCAAT-AAAAAATGTTTGTCAAAGTTCTTTTTC i otoGar3.GL873654 C 0 I 269 s mm10.chr7 111096277 1064 - 145441459 CC-CTTGCTTTCCAGGCTTAAGG-T------T--TTT-GATTTC-----------CTT--------------TGT-ACTGTTTGGACTA-AAGTGAAGA--TTTGATAACTTTATTCCA-TTATCT--AAAAAGCATAAATTATTCATGCATAGTGTATG---GACTTCGTTTTGTAGCAA-------ATCACAGGATTTGTTCAAATAACA-GATCTTTTAAGTGTATGAATGTAAATAATCAT-AGATGAGAGTGTACCTCGCTGTATTTTCAAATAAGTAACCTT-----------TTT------------AAGACATTAAAACTCAATATATCAGTTGACCCATTCCTCCTGCTATGCCTGGA-------ATTCTGTTGTGGT-AACCGCTGACTC---CTGTTTTATGTCAAAAAGAT--GGAGTTTTCAGAATC----CTCTGGCA-CCTGT--AAAACATCACTAACATAGTATGCGGGCCT---GTGGCCTTCTAATGACTCTGT-ACACGGTT-GTTGCTAACTGTAAATTACTAATAAATCTTTTTTGATA-TTTAAACTATAGTGA-A---AAAGATCTGGCCACTTT--GTGTTTTTAATAAAGGCCATGGAATAAAGAGATCCAAAGATTTCAATATTTTTAAC---TATTTTGGT--TTTT-GTTAACTTTCTCACTAAAACATTCAGTAATGATAAAGGCA---TGTGAAAC-TGCACTGTAGGAGAATTGGACTGCTTAAGGATGGCTGA------TTATTTTAAATTTTATATCTTTTGTATAGAGCAACAAGAAAATATCTTATAATTTGGTTTCATTGTTGAGATCCAGAGCTTGACAGCTGTCG-TTTCC------------------TGTGCGCCTGCATGTGAACAACTAACCCTTTTGTAGGGTTCACAGATCATGAGATTGAACACATGTTT-AGGCA-TGTTAAGCATCAGAGCACGTGCTGTGCTCACAACACTTGTAGGC----TGAGATGTCCCAG--------------------C---------CCAGTTCTCTACGCTCGTACAAGGCGAACTTGCACTTTTTCTCAGCCC----CCTGGGTCACTGACTGGGGCATGCATTGTCCCAATAATAACTGGCAGCATGGTGGCCCCACTGTGCATCTTCCAAT-----CGCAAGGCTTTTATCCTAAAACAGAATAAAACTCTTCAAT-GAAAACTCTTC-TCAGAGTTCTTTCTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4615801 1154 - 122678785 TC-ATAGCTTTCCAGGCTTGAGA-T------T--TTT-GATTTTGATTTTTTTTTTTT--------------TTT-AATGTTTGGAACATAAATGAAGA--TTTGAT-ACATTCTTCCA-TTATCT--GAAAAGGATAAATTCCTCCTACTCACTGTAAG---AACTTCATTTTATAACAAATGGCATATCACAGGATTTGTCCAAATAATA-AATATTTTCAGTATATGAATGTAAATAATCAT-AGATAAGAATGTACTTAGCTGTATTTTCAAATAAGTA--CCC-TCTCCCCTTTTTT------------AAGACAATAAAACT--GGGCATCGATTAACCTGTTCTTCCTGATATGCCTAGA-------ATTTCGTCCTGATAACC--CTGATTCATTCCATTATATTTCAAGAGGATTCAGAGTGCTAGAAATT---ATTTTGGCAGCCTAT--AAGATATCCTAACACTGGTCCTTGGGCCT---GTGGCCCACAAATGACTCGATAATAGAGTTCCTTGCTAATTATAAATCACTAGTAAATC-TTTTTGATATTTTAAGCTATAGTGG-GGGAAAAAATCTGGCCACTTT-TGTGTTTTT-ATGAAGGCCATGGAATAAAGGGATCCAAAGATTTAAATATTTTTATC---TATTTTGAT--TTTT-GTTAACTTTCTCCTTAAAGTATTCAGTAGTGATAAAGATG---TGGGAAAC-TGCACTGTAGGAGAATTGGAATATTTAAAGATGGTTGatatttttaatttt-aattttatatCTTTTGTATAGCTCTACAAGGAGATGTTTTGTAATTTGGTTTCGT--TTAAGGTCCAGTACTTGGCAGCCATAG-TTTAG-ATAATGTTGCTTAATACTGTTTGCTTGCATGTTAACAACAAAACCTTTTGGAGGACCCACAAATCATGATCTTGAACACATTTCCGAAGCA-TTCTGAACATCAAAGCAAGTGCTCTG-ATGATACTTATGTAGACTGTTTGAGACGTCCTGGGCCAGTTTCAAGA---AAAGC-TGTAAATACCAGTACTACATGCTCTGAAAGTATGAATTCACGTGTTTTCCAAACCC----TCTGGGTCACTAACTAAGGCATTTGGTGTCCCAATAATAACTGGCAGCATGGCATACCTGCAGTGCACCTTACAATATTAAAGCAAGGCTTTTATTCTAAGACAGAATAAAACTGTTAAAT-AAAACATGTTCGTCAAAGTTCTTTCTC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 340746 1187 + 643850 TC-TTAGCTTTCCAGGCTTAAGA-T------TTCTTT-GACTTTT----------TTTTCTTTTTCTTTTTATTT-AATGTTTGGAACATAAATGGAGA---TTGAT-AAATTCTTCCA-TTATCT--AAAAAGAATAAACTATTTGTGTTCATTAAAAGATAAACTTCATTTTATAGCAAATGGCATATCACAGGATTTGTCCAAATAATA-GATATTTTCAGTATATGAATGTAAATAATCAT-AGATAAGAATGTACTTAGGTGTATTTTCAGATAAGTAACCCC-ACTCTTTCttttttttttttttttaaagaaaataaaaGT--AGACATCAGTTAACCTGTTCTCCCTGATATGCCTGGAATTAAACATTTTGTCATGAT-GCC--TTGACTCGTTCCATTCAATTTCAAGAAGATTCAGAGTGGTAGAAATTGTTATTTTGGCAACCTAT--AAGACATCAGAACACTGGTCCTTAGGCCT---GTGACCCACAGGTGACTCAGT-ATAGAGTTCATTGCTTATTATAATTTGCTAAAAAAAA-ATTTTGATATTTTAAAGTATAATGG-A---AAAAATCTGACCACTTT-GGTGTTTTT-ATGAAGATCATGGAATAAAGGGATCCAAAGATTTAAATATTTTTATC---TATTTTGAT--TTTT-GTTAACTTTCTCCTTAAAATATTCAGTAGTGATACAGATGTTTTG-AAAAC-TGCGCTGTAGGAGAATTGGAGTATTTAAAGATGGGTGATATTTTTTATTTT-AATTTTGTATCTTTTGTATAGCTCTATAAGAACATGTTTTGTAATTTGGTCTCATTATCAAGGTCCAGTATTTGATAGCCTTAG-TGTAG-ATTATATCGTTTAGTACTATTTGCTTGCATGTTAAAAATGAAACTTTTTGGAGGACCCACA-ATCATGATGCTGAACATATTTCTGCGATATTTCTGAACAT-GAAGCAAGTGCTATG-GCAATACTTGTATAGATTGTTTGAGATGTCCCAAGCAAATTTCAAGAAGAAAAAC-TGTAAATTTTGGCTCTACCTATTTTGAAAGTTTAGATTCATGTGTTTTCCCAACCC----TCTGGGTAACTTACTGGGGCATTTGGTGCTCTAGTAATAACTGGCAGCATGGCATACCTGCAATGCACCTTACAATATTAAAGCAAGATTTTTATTCTAAGGCAGAATAAAACTGTTCAAT-AAAAAATGTTCGTCAAAGTTCTTTCTC i dasNov3.JH563638 I 2 C 0 a score=14523.000000 s hg38.chr19_GL383574v1_alt 77057 6 + 155864 TTTAAA s panTro5.chr19 36145625 6 + 61309027 TTTAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39891824 6 + 64411610 TTTAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6309414 6 - 8369475 TTTAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63901978 6 - 106955855 TTTAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30213441 2 + 53671032 TT---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667166 2 + 59248254 TT---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4533688 2 - 13342542 TT---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5463922 2 + 7714307 TT---- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270039 2 + 50890351 TT---- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895045 2 - 2385121 TT---- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2335342 2 + 4274983 TT---- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28566183 6 + 49145316 TTTAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5412817 6 + 8899380 TTTAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1617481 6 - 2680843 TTTAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 367599 6 - 4471408 TTTAAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3964973 6 - 30143674 TTTAAA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 581478 6 + 2501019 TTTAAA i proCoq1.NW_012149263v1 C 0 I 170 s otoGar3.GL873654 5484460 6 + 5549422 TTTAGA i otoGar3.GL873654 I 269 C 0 s mm10.chr7 111097341 3 - 145441459 ---ATA i mm10.chr7 C 0 I 2 s canFam3.chr1 4616955 6 - 122678785 TTTAAA i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 341933 6 + 643850 TTTAAA i dasNov3.JH563638 C 0 C 0 a score=429117.000000 s hg38.chr19_GL383574v1_alt 77063 30 + 155864 TAGTAACATTCTGTTTCAGT----AGGAACATAA s panTro5.chr19 36145631 30 + 61309027 TAGTAACATTCTGTTTCAGT----AGGAACATAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39891830 30 + 64411610 TAGTAACATTCTGTTTCAGT----AGGAACATAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6309420 30 - 8369475 TAGTAACATTCTGTTTCAGT----AGGAACATAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63901984 30 - 106955855 TAGTAACATTCTGTTTCAGT----AGGAACATAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30213443 30 + 53671032 TAGTAACACTCTGTTTCAGT----AGGAACATAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667168 30 + 59248254 TAGTAACACTCTGTTTCAGT----AGGAACATAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4533690 30 - 13342542 TAGTAACACTCTGTTTCAGT----AGGAACATAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5463924 30 + 7714307 TAGTAACACTCTGTTTCAGT----AGGAACATAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270041 30 + 50890351 TAGTAACACTCTGTTTCAGT----AGGAACACAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895047 30 - 2385121 TAGTAACACTCTGTTTCAGT----AGGAATATAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2335344 30 + 4274983 TAGTAACACTCTGTTTCAGT----AGGAACATGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28566189 30 + 49145316 TAGTAACATTCTGTTTCAGT----AGGAACATAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5412823 30 + 8899380 TAGTAACATTCTGTTTCAGT----AGGAACATAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1617487 30 - 2680843 TAGTAACATTCTGTTTCAGT----AGGAACATAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 367605 30 - 4471408 TAGTAACATTCTATTTCAGT----AGGAACATAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3964979 30 - 30143674 CAATAATATTCTCTTCTAGT----AGAAACATAA i micMur3.chr22 C 0 I 143 s otoGar3.GL873654 5484466 30 + 5549422 CAGTAACATTCTCTTTTAGT----AGAAACATAA i otoGar3.GL873654 C 0 I 899 s mm10.chr7 111097346 28 - 145441459 TAGTGACGTTCTCTTC--AT----GGGAACAAAA i mm10.chr7 I 2 C 0 s canFam3.chr1 4616964 34 - 122678785 TAATAATATCATCTTACGATAGAAAGAAACATAA i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 341939 28 + 643850 TATTAACAGTCTCTTGCAAT----AGAAAGAA-- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 581484 170 + 2501019 I a score=29961.000000 s hg38.chr19_GL383574v1_alt 77093 3 + 155864 TGA-- s panTro5.chr19 36145661 3 + 61309027 TGA-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39891860 3 + 64411610 TGA-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6309450 3 - 8369475 TGA-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902014 3 - 106955855 TGA-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30213473 3 + 53671032 CGA-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667198 3 + 59248254 CGA-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4533720 3 - 13342542 CGA-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5463954 3 + 7714307 TGA-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270071 3 + 50890351 TGA-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895077 3 - 2385121 TGA-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2335374 3 + 4274983 TGA-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28566219 3 + 49145316 TGA-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5412853 3 + 8899380 TGA-- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1617517 3 - 2680843 TGA-- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 367635 3 - 4471408 TGA-- i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111097374 3 - 145441459 TGA-- i mm10.chr7 C 0 C 0 s canFam3.chr1 4616998 3 - 122678785 TGA-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 341967 3 + 643850 --ACA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 581484 170 + 2501019 I e micMur3.chr22 3965009 143 - 30143674 I e otoGar3.GL873654 5484496 899 + 5549422 I a score=69978.000000 s hg38.chr19_GL383574v1_alt 77096 5 + 155864 AAGGA s panTro5.chr19 36145664 5 + 61309027 AAGGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39891863 5 + 64411610 AAGGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6309453 5 - 8369475 AAGGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902017 5 - 106955855 AAGGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30213476 5 + 53671032 AAGGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667201 5 + 59248254 AAGGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4533723 5 - 13342542 AAGGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5463957 5 + 7714307 AAGAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270074 5 + 50890351 AAGGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895080 5 - 2385121 AAGGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2335377 5 + 4274983 AAGGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28566222 5 + 49145316 AAGGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5412856 5 + 8899380 AAGGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1617520 5 - 2680843 AAGGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 367638 5 - 4471408 AAGGC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5485395 5 + 5549422 AAGGC i otoGar3.GL873654 I 899 C 0 s mm10.chr7 111097377 5 - 145441459 AAAGC i mm10.chr7 C 0 C 0 s canFam3.chr1 4617001 5 - 122678785 AACAC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 341970 5 + 643850 AAGTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 581484 170 + 2501019 I e micMur3.chr22 3965009 143 - 30143674 I a score=1869837.000000 s hg38.chr19_GL383574v1_alt 77101 135 + 155864 ATCTTTTAAATGGAAGAGCGGAATT------ATAATGTTTGTATTCCCTGTAATAACTATAAATCAGTT----ACT----TTATTTC---TAAGATTGAGTTATTGTTGCAGATGTTTAGGGAAAGCTAAAAGCCCCTTCC-TTCCCCTCCTG s panTro5.chr19 36145669 135 + 61309027 ATCTTTTAAATGGAAGAGCGGAATT------ATAATGTTTGTATTCCCTGTAATAACTATAAATCAGTT----ACT----TTATTTC---TAAGATTGAGTTATTGTTGCAGATGTTTAGGGAAAGCTAAAAGCCCCTTTC-TTCCCCTCCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39891868 135 + 64411610 ATCTTTTAAATGGAAGAGCGGAATT------ATAATGTTTGTATTCCCTGTAATAACTATAAATCAGTT----ACT----TTATTTC---TAAGATTGAGTTATTGTTGCAGATGTTTAGGGAAAGCTAAAAGCCCCTTTC-TTCCCCTCCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6309458 135 - 8369475 ATCTTTTAAATGGAAGAGCGGAATT------ATAATGTTTGTATTCCCTGTAATGACTATAAATCAGTT----ACT----TTATTTC---TAAGATTGAGTTATTGTTGCAGATGTTTAGGGAAAGCTAAAAGCCCCTTTC-TTCCCCTCCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902022 136 - 106955855 ATCTTTTAAATGGAAGAGCGAAATTATG---ATAATGTTTGTATTCCCTGTAATAACTATAAATT--TT----ACT----TTATTTC---TAAGATTGAGTTATTATTGCAGATGTTTAGGGAAAGCCAAAAGCCCCTTTC-TTCCCCTCCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30213481 135 + 53671032 ATCTTGTAAATGGAAGAGCGGAATT------ATGATGTTTGTATTCCCTGTAATAACTATAAATCAGTT----ACT----TTATTTC---TAAGATTGAGTTATTGTTGCAGATGTTTAGGGAAAGCTAAGAGCCCCTTTC-TTCCCCTCCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667206 135 + 59248254 ATCTTGTAAATGGAAGAGCGGAATT------ATGATGTTTGTATTCCCTGTAATAACTATAAATCAGTT----ACT----TTATTTC---TAAGATTGAGTTATTGTTGCAGATGTTTAGGGAAAGCTAAGAGCCCCTTTC-TTCCCCTCCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4533728 135 - 13342542 ATCTTGTAAATGGAAGAGCGGAATT------ATGATGTTTGTATTCCCTGTAATAACTATAAATCAGTT----ACT----TTATTTC---TAAGATTGAGTTATTGTTGCAGATGTTTAGGGAAAGCTAAGAGCCCCTTTC-TTCCCCTCCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5463962 135 + 7714307 ATCTTGTAAATGGAAGAGCGGAATT------ATGATGTTTGTATTCCCTGTAATAACTATAAATCAGTT----ACT----TTATTTC---TAAGATTGAGTTATTGTTGCAGATGTTTAGGGAAAGCTAAGAGCCCCTTTC-TTCCCCTCCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270079 135 + 50890351 TTCTTGTAAATGGAAGAGCGGAATT------ACGATGTTTGTATTCCCTGTAATAACTATAAATCAGTT----ACT----TTATTTC---TAAGATTGAGTTATTGTTGCAGATGTTTAGGGAAAGCTAAAAGCCCCTTTC-TTCCCCTCCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895085 135 - 2385121 ATCTTGTAAATGGAAGAGCGGAATT------ACGATGTTTGTATTCCCTGTAATAACTATAAATCAGTT----ACT----TTATTTC---TAAGATTGAGTTATTGTTGCAGATGTTTAGGGAAAGCTAAGAGCCCCTTTC-TTCCCCTCCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2335382 135 + 4274983 ATCTTTTAAATGGAAGAGCGGAATT------ATAATGTTTGTATTCCCTGTAATAACTATAAATCAGTT----ACT----TTATTTC---TAAGATTGAGTTATTGTTGCAGATGTTTAGGGAAAGCTAAAAGCCCCTTTC-TTCCCCTCCTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28566227 134 + 49145316 ATCTTTTAAATGGAAAAGGGGGAGTATGATAATAATGTTTGTATCCTCTGTAATAACTATAAATCAGTT----AC----------TT---TAAGATTGATTTATTGTTACAGATGTTTAGGGAAAGCTAAAAGCCCCTTTC-TTCCCCTCCT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5412861 138 + 8899380 ATCTTTTAAATGGAAAAGGGGGAGTATG---ATAATGTTCGTATTCTCTGTAATAACTGTAAATCAGTT----ACT----TTATTTT---TAAGATTGATTTATTGTTGTAGATGTTTAGGGAAAGCTAAAAGCCCCTTTC-TTCCCCTCCTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1617525 138 - 2680843 ATCTTTTAAATGGAAAAGGGGGAGTATG---ATAATGTTTGTATTCCCTGCAATAACTATAAATCAGTT----ACT----TTATTTT---TAAGATTGATTTATTGTTGCAGATGTTTAGGGAAAGCTAAAAGTCCCTTTC-TTCCCCTCCTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 367643 138 - 4471408 ATCTTTTAAATGGAAAAGGGGGAGTATG---ATAATGTTTGTATTCTCTGTAATAACTATAAATCAGTT----ACT----TTATTTT---TAAGATTGATTTATTGTTGCAGATGTTTAGGGAAAGCTAAAAGCCCCTTTC-TTCCCCTCCTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3965152 133 - 30143674 ATCTTTAAAATAGAAGAGTGGAATTATA---GTAATGTTTGTATTCCCTGTAATAAATATAAATAAATT----A----------TTC---TAAGATTTATATGTTGTTATAGATATTCAGGGAAAGCTAAAAGCCCTTTTCTTTCCCCTCCTG i micMur3.chr22 I 143 I 22 s proCoq1.NW_012149263v1 581654 138 + 2501019 ATCTTTAAAATAGAAGAGTGGAATTACA---GTAATGTTTGTATTCCCTGTAATAAATATAAATAAATT----ACT----CTCTTTC---TAAGATTTATATATTATTGTAGATGTTCAGGGAAAGCTAAAAGCCGTTTTC-TTCCCCTCCTG i proCoq1.NW_012149263v1 I 170 I 28 s otoGar3.GL873654 5485400 125 + 5549422 ATCTTTATAGTAGAAGAGTGGAATTACA---GAGATATGTGTAATGCCCATGATAA----AAATAAAAT----ACT----CTGTCCC---AAAGATT--GGGTTTGTTGGAGATGTTTAGGG------AAAAACCCCTTTC--TTCCCTACTG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111097382 99 - 145441459 ATCTTGCCTGTGAGATGCAGCAGTG------GCAATGTCTG----CCCTGGAGCAGC------TCAGTC----ATT----T----------------------TTGTTGTACGTGGTCAAGGAAAGCTAGAAGCCCCTTTC-TCTC------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4617006 137 - 122678785 CTCTTTTAAGTATAAGAATGAAATTATG---GTTATGTTTATATTCCCTAAAATAAC--TAAATTAATT----TCTAACATTTTGCC---TAAGATTTATTTATTATTGTAGGTGTTAAGGTAAAGCTGGAAGCCCC---C-TGTCCCCACTG i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 341975 135 + 643850 ATCTTT---ATGTAAGAATTAAATTATG---GTCATAGTTATATTCTCTAAAATAAC-------CAGTTTTGAACA----TTATATCTGATGAGATTTATTTATTGTTGCAGGTATTTAGGGAAAGCTAGAAGCCTCTTTG-TCCTCCTCCTG i dasNov3.JH563638 C 0 I 2 a score=236431.000000 s hg38.chr19_GL383574v1_alt 77236 26 + 155864 TGTGT-AAATAAAATACTTCTGAGATC s panTro5.chr19 36145804 26 + 61309027 TGTGT-AAATAAAATACTTCTGAGATC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892003 26 + 64411610 TGTGT-AAATAAAATACTTCTGAGATC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6309593 26 - 8369475 AGTGT-AAATAAAATACTTCTGAGATC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902158 26 - 106955855 ATTGT-AAATAAAATACTTCTGAGATC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30213616 26 + 53671032 AGTGT-AAATAAAATACTTCTGAGATC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667341 26 + 59248254 AGTGT-AAATAAAATACTTCTGAGATC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4533863 26 - 13342542 AGTGT-AAATAAAATGCTTCTGAGATC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5464097 26 + 7714307 AGTGT-AAATAAAATACTTCTGAGATC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270214 26 + 50890351 AGTGT-AAATAAAATACTTCTGAGATC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895220 26 - 2385121 AGTGT-AAATAAAATACTTCTGAGATC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2335517 26 + 4274983 AGTGT-AAATAAAATACTTCTGAGGTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28566361 26 + 49145316 AGTGT-AAAAAAAATAGTTCTGAGATC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5412999 26 + 8899380 AGTGT-AAAAAAAATAGTTCTGAGATC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1617663 27 - 2680843 AGTATAAAAAAAAATAGTTCTGAGATC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 367781 26 - 4471408 AGTGT-AAAAAAAATAGTTCTGAGATG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5485525 22 + 5549422 AGTGT-----AGAGCACTCCTAAATTA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111097481 24 - 145441459 --TGA-GCATATGACACACACAAATTA i mm10.chr7 C 0 C 0 s canFam3.chr1 4617144 22 - 122678785 -----GATGCAGAGTGTTCTTGAGTTG i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 342112 20 + 643850 TGTGG-AAAT------CTTCTAAGTCA i dasNov3.JH563638 I 2 C 0 e proCoq1.NW_012149263v1 581792 28 + 2501019 I e micMur3.chr22 3965285 22 - 30143674 I a score=98271.000000 s hg38.chr19_GL383574v1_alt 77262 6 + 155864 AGATCC s panTro5.chr19 36145830 6 + 61309027 AGATCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892029 6 + 64411610 AGATCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6309619 6 - 8369475 AGATCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902184 6 - 106955855 AGATCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30213642 6 + 53671032 AGATCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667367 6 + 59248254 AGATCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4533889 6 - 13342542 AGATCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5464123 6 + 7714307 AGATCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270240 6 + 50890351 AGATCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895246 6 - 2385121 AGATCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2335543 6 + 4274983 AGATCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28566387 6 + 49145316 AGATCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5413025 6 + 8899380 AGATCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1617690 6 - 2680843 AGATCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 367807 6 - 4471408 AGATCC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3965307 6 - 30143674 AGATCT i micMur3.chr22 I 22 C 0 s otoGar3.GL873654 5485547 6 + 5549422 AGATCT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111097505 6 - 145441459 GGATCT i mm10.chr7 C 0 C 0 s canFam3.chr1 4617166 6 - 122678785 CAGTCC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 342132 6 + 643850 AGATCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 581792 28 + 2501019 I a score=665982.000000 s hg38.chr19_GL383574v1_alt 77268 47 + 155864 GTGACATGAGGAGATTGAGCCACCCAGGCACAGGCCAGGCTGGAAAC s panTro5.chr19 36145836 47 + 61309027 GTGACATGAGGAGATTAAGCCACCCAGACACAGGCCAAGCTGGAAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892035 47 + 64411610 GTGACATGAGGAGATTAAGCCACCCAGACACAGGCCAAGCTGGAAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6309625 47 - 8369475 GTGACATGAGGAGATTAAGCCACCCAGGCACAGGCCAAGCTGGAAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902190 47 - 106955855 GTGACATGAGGAGATTAAGCCAACCAGGCACAGGCCAAGCTGGAAAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30213648 47 + 53671032 GTGACATGAGGAGACTAAGCCAACTAGGCACAGGCCAAGCTGGAAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667373 47 + 59248254 GTGACATGAGGAGACTAAGCCAACTAGGCACAGGCCAAGCTGGAAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4533895 47 - 13342542 GTGACATGAGGAGACTAAGCCAACTAGGCACAGGCCAAGCTGGAAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5464129 47 + 7714307 GTGACATGAGGAGACTAAGCCAACTAGGCACAGGCCAAGCTGGAAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270246 47 + 50890351 GTGACATGAGGAGACTAAGCCAGCTAGGCACAGGCCAAGCTGGAAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895252 47 - 2385121 GTGACATGAGGAGACTAAGCCACCTAGGCACAGGCAAAGTTGGAAAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2335549 47 + 4274983 GTGACATGAAGAGACTAAGCCAACTAGGCACAGGCCAAACTGGAAAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28566393 47 + 49145316 TTGACATGAGGAGACTAAGCCAACCAGGCACAGGCCAAGCTGGAAAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5413031 47 + 8899380 ATGACATGAGAAGACTAAGCCAACCAGGCACAGGCCAAGCTGGAAAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1617696 47 - 2680843 GTGACATGAGGAGACTAAGCCAACCAGGCACAGACCAAGCTGGAAAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 367813 47 - 4471408 GTGACATGAGGAGACTAAGCCAACCAGGCACAGGCCAAGCTGGAAAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3965313 47 - 30143674 GTGGCATTAGGAGACTAAGGCAGCCATGCACAGGCCAGGCTGGAAAC i micMur3.chr22 C 0 I 1895 s proCoq1.NW_012149263v1 581820 47 + 2501019 GTGACATTAGGAGACTAAGGCAACCAGGCACAGGCCAAGCTGGAAAC i proCoq1.NW_012149263v1 I 28 I 1257 s otoGar3.GL873654 5485553 47 + 5549422 GTGACATGAGGAAACTATACCGATCCGGCCCAAGGAATGCCACAAAC i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111097511 45 - 145441459 GTGCCATGAGGAGAAAAAATCAGCCA--CATAAACCACACTGGAACG i mm10.chr7 C 0 I 1 s canFam3.chr1 4617172 24 - 122678785 CCATCTTGAGG----TGAGCCAGCTAGG------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 342138 45 + 643850 --GTCATGAGGGTTCTAAGTTCACCAGGCATAGACAGGCATAGGCAC i dasNov3.JH563638 C 0 C 0 a score=488748.000000 s hg38.chr19_GL383574v1_alt 77315 46 + 155864 -AGCAGCCAGAACACACTCCCTGTGGGCAGACGCATGAAGAAGATGC s panTro5.chr19 36145883 46 + 61309027 -AGCAGCCAGAACACACTCCCTGTGGGCAGACGCATGAAGAAGATGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892082 46 + 64411610 -AGCAGCCAGAACACACTCCCTGTGGGCAGACGCATGAAGAAGATGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6309672 46 - 8369475 -AGCAGCCAGAACACACTCCCTGTGGGCAGATGCATGAAGAAGATGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902237 46 - 106955855 -AGCAGCCAGAACACACTCCCTGTGGGCAGACACATGAAGAAGATGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30213695 46 + 53671032 -AGCAGCCGGAACACACTCCCTGTGGGCAGACGCCTGCAGAAGATGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667420 46 + 59248254 -AGCAGCCGGAACACACTCCCTGTGGGCAGACGCCTGCAGAAGATGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4533942 46 - 13342542 -AGCAGCCGGAACACACTCCCGGTGGGCAGACGCCTGCGGAAGATGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5464176 46 + 7714307 -AGCAGCCAGAACACACTCCCTGTGGGCAGACGCATGCAGAAGATGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270293 46 + 50890351 -AGCAGCCGGAACACACTCCCTGTGGGCAGACGCATGCAGAAGATGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895299 46 - 2385121 -AGCAGCCGGAACACACTCCCTGTGGTCAGACGCATGCAGAAGATGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2335596 46 + 4274983 -AGCAGCCAGAACACACTCCCTGTGGGCAGACGCATGCAGAAGATGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28566440 45 + 49145316 -AGCAGCCAGAACACACCCCGCATGGG-AGACGCATGCAGAAGATGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5413078 43 + 8899380 -AGCAGCCAGAACACACCCCCCATGGG-AGACGCATGC--AAGATGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1617743 45 - 2680843 -AGGAGCCAGAACACACCCCCCATGGG-AGATGCATGCAGAAGATGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 367860 45 - 4471408 -AGCAGCCAGAACACATGCCCTGTGGG-AGACACATGCAGAAGATGC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5485601 44 + 5549422 -CCATGTCAGAACATACTCGCCGTGGGCAGAG--TTGTAGGAGATAC i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111097557 45 - 145441459 -CCCACTCAGAGTGCAC-CTCCATGGGCAGATAGATGTAGGAGATAC i mm10.chr7 I 1 I 574 s canFam3.chr1 4617196 41 - 122678785 -----GCTAAAATGCTCTCTCTGTGGGCAAGCAGGTGTGAAAGA-GC i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 342183 46 + 643850 CTCAGGCCCAAATGTGCCTCCTACAGGCAGGCAGATGCCAAAGA-GC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 581867 1257 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I a score=1259543.000000 s hg38.chr19_GL383574v1_alt 77361 123 + 155864 AGA-----------------------ATCTGTCTATTAAA------ACA-----GT--TCGCTCC---AAAAGCTGGGCTTCATGT-GATGGTAGGGCAAGAGGTCGGGAACAGCAGTGCAGCACAGTGGCTCTCGGTG--GGGTT-ACCTGACAT-CCTAGGAACA------------------ s panTro5.chr19 36145929 124 + 61309027 AGA-----------------------ATCTGTCTATTAAA------ACA-----GT--TCGCTCC---AAAAGCTGGGCTTCATGT-GATGGTAGGGCAGGAGGTCAGGAACAGTAGTGCAGCACAGTGGCTCTCGGTG--GGGTTGACCTGCCAT-CCTAGGAACA------------------ i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892128 116 + 64411610 AGA-----------------------ATCTGTCTATTAAA------ACA-----GT--TCGCTCC---AAAAGCTGGGCTTCATGT-GATGGTAGGGCA--------GGAACAGTAGTGCAGCACAGTGGCTCTCGGTG--GGGTTGACCTGCCAT-CCTAGGAACA------------------ i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6309718 124 - 8369475 AGA-----------------------ATCTGTCTATTAAA------ACA-----GT--TCGCTCC---AAAAGCTGGGCTTCCTGT-GATGGTAGGGCAAGAGGTCGGGAACAGTAGTGCAGCACAGTGGCTCTCTGTG--GGGTTGACCTGACAT-CCTAGGAACA------------------ i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902283 124 - 106955855 AGA-----------------------ATCTGTCTATTAGA------ACA-----GT--TCGCTCC---AAAAGCTGGGCTTCATGT-GATGGTAGGGCAAGAGGTCGGGAATGGTAGTGCAGCACAGTGGCTCTCTGTG--GGATTGACCTGACAT-CCTAGGAGCA------------------ i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30213741 124 + 53671032 AGA-----------------------ACCTGTCTGTTCGA------ATC-----GT--TCCCTCC---AAAAGCTGGGCTTCATGT-GAGGGTGGGGCAAGAGCTCGGGAACGGTAGTGCGGCACAGTGGCTCTCTGTC--GGGTTGACCTGACAT-CCTAGGAGCA------------------ i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667466 129 + 59248254 AGA-----------------------ACCTGTCTATTCGA------ATCGAATGGT--TCCCTCC---AAAAGCTGGGCTTCATGT-GAGGGTGGGGCAAGAGCTCGGGAACGGTAGTGCAGCACAGTGGCTCTCTGTC--GGGTTGACCTGACAT-CCTAGGAGCA------------------ i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4533988 122 - 13342542 AG------------------------ACCTGTCTGTTCGA------ATC-----AC--TCCCTCC---AAAAGCTGGGCTTCGTGT-GAGGGCGGGGCAAGAGCTC-GGAATGGTGGCGCGGCACAGTGGCTCTCTGTC--GGGTTGACCTGACAT-CCTAGGAGCA------------------ i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5464222 124 + 7714307 AGA-----------------------ACCTGTCTATTAGA------ATC-----GT--TCCCTCC---AAAAGCTGGGCTTCATGT-GAGGGTAGGGCAAGAGCTCGGGAACGGTAGTGCAGCTCAGTGGCTCTCTGTC--GGGTTGACCTGACAT-CCTAGGAGCA------------------ i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270339 124 + 50890351 AGA-----------------------ACCTGTCTATTAGA------ATC-----GT--TCCCTCC---AAAAGCTGGGCTTCATGT-GAGGGTAGGGCAAGAGCTCGGGAACGGTAGTGCAGCACAGTGGCTCTCTGTC--GGGTTGACCTGACAT-CCTAGGAGCA------------------ i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895345 124 - 2385121 AGA-----------------------ACCTGTCTATTAGA------ATC-----GT--TCCCTCC---AAAAGCTGGGCTTCATGT-GAGGGTAGGGCAAGAGCTCGGGAACGGTAGTGCAGCACAGTGGCTCTCTGTC--GGGTTGACCTGACAT-CCTAGGAGCA------------------ i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2335642 124 + 4274983 AGA-----------------------ACCTGTCTATTAGA------ATA-----GT--TCCCTCC---AAAAGCTGGGCTTCATGT-GAGGGTAGGGCAAGAGCTCGGGAACGGTAGTGCAGCACAGTGGCTCTCTGTC--AGGTTGACCCGACAT-CCTAGGAGCA------------------ i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28566485 124 + 49145316 AGA-----------------------ACCTGTCTATTAGA------ACA-----GT--TCCCTTC---AAAAGCTGGGCTTTGTGT-AAGGGTAGGGTGAGAGGTCAGGAATGGTGTTGCAGCACAGTGGCTCTCTGTT--GGGTTGTCCTGATGT-CCTAGGAACA------------------ i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5413121 124 + 8899380 AGA-----------------------ACCTGTCTATTAGA------ACA-----GT--TCCCTCC---GAAAGCTGGGCTTTATGT-GAGGGTAGGGCGAGAGGTCAGGAATGGTAGTGCAGCATAGTGGCTCTCTGTA--GGGTTGCCCTGATGT-CCTAGGAACA------------------ i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1617788 124 - 2680843 AGA-----------------------ACCTGTCTATTAGA------ACA-----GT--TCCCTCC---AAAAGCTGGGCGTCGTGT-GAGGGAAGGGCAAGAGGTCAGGAATGGTAGTGCATCACAGTGGCTCTCTGTC--GGGTTGACCTGATGT-CCTAGGAACA------------------ i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 367905 124 - 4471408 AGA-----------------------ACCTGTCTATTAGA------ACA-----GT--TCCCTCC---AAAAGCTGGGCTTCGTAT-GAGGGTAGGGCGAGAGGTCAGGAATGGTAGTGCAGCACAGTGGCTCTCTGTC--GGGTTGACCGGATGT-CCTAGGAACA------------------ i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5485645 125 + 5549422 AGA-----------------------GCTTGTCTAATGGA------CCA-----TTTCTCTCTCC---AACGGCAGGGCTTAATGTCCAGGGTAGGG--AGAGGTCAGGAGTGGTGATCCAACTCAGTAGCTCTCAATT--GGGTTGAACTGACAT-CCTGGGAGTA------------------ i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4617239 153 - 122678785 AGAGGGAAGGGCTGACCCCTAACCTCATTTTTTGGTCAGA------CCA-----CT--TCTCCCCCTGAAAAGCAAGACTTACTGTAGAGGTTAGTGAGAGAGGTCAGGAGTGTTAATCCAGCTcagtggttcttaatcagggattggactgatat-cccgagagca------------------ i canFam3.chr1 I 2 I 242 s dasNov3.JH563638 342229 147 + 643850 ------------TGACT---------CCTTGTCTGTTGGAGAGACCATT-----TC--TCCCTCC---AGAAACAAGGCTTAAT---GAGGGCTGG--AGAAAGTTAAGAGTATTAGTCCAACTCAATGGCCTtttttt--ttttttttttgaggtacctgggattaaacccaggacttcctgtg i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 581867 1257 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e mm10.chr7 111097602 574 - 145441459 I a score=329097.000000 s hg38.chr19_GL383574v1_alt 77484 34 + 155864 cagtcatctgttgcttaataatagcgacatgTTC------------------------------------------------- s panTro5.chr19 36146053 34 + 61309027 cagtcatctgttgcttaataatagcgacatgTTC------------------------------------------------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892244 34 + 64411610 cagtcatctgttgcttaataatagcgacatgTTC------------------------------------------------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6309842 34 - 8369475 cagtcatctgttgcttaataatagcgacatgTTC------------------------------------------------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902407 34 - 106955855 cagtcatctgttgcttaataatagcgacatgttc------------------------------------------------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30213865 34 + 53671032 CAGTCATCTACTGCTTAATAATAGCGACATGttc------------------------------------------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667595 34 + 59248254 CAGTCATCTATTGCTTAATAATAGCGACATGttc------------------------------------------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4534110 34 - 13342542 CAGTCATCTATTGCTTAATAATAGCGACATGTTC------------------------------------------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5464346 34 + 7714307 CAGTCATCTATTGCTTAATAATAGCGACATGttc------------------------------------------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270463 34 + 50890351 CAGTCATCTGTTGCTTAATAATAGCGACATGttc------------------------------------------------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895469 34 - 2385121 cagtcatctattgcttaataatagcgacatgttc------------------------------------------------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2335766 34 + 4274983 CAGTCATCTGTTGCTTAATAATAGCGACATGttc------------------------------------------------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28566609 31 + 49145316 CAATCATCTGTTGCT---TAATAGCGACATGCtt------------------------------------------------- i calJac3.chr22 C 0 I 297 s saiBol1.JH378197 5413245 34 + 8899380 caatcatctgttgcttaataatagcgacatgttt------------------------------------------------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1617912 34 - 2680843 CAATCATCTGTTGCTTAATAATAGCGACATGTTC------------------------------------------------- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 368029 34 - 4471408 CAATCAGCTGTTGCTTAATAATAGCGACATGTTC------------------------------------------------- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5485770 32 + 5549422 CAATCCTCCCAcatttaatgacagggacacat--------------------------------------------------- i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 342376 83 + 643850 tgggaagccagtgctcaaccactgagccacattggctcccctgagttggttttctcatttgttagcttgttgtttgttttgtt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 581867 1257 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e mm10.chr7 111097602 574 - 145441459 I e canFam3.chr1 4617392 242 - 122678785 I a score=206549.000000 s hg38.chr19_GL383574v1_alt 77518 20 + 155864 Ttatttttaaatagcaatga s panTro5.chr19 36146087 20 + 61309027 Ttatttttaaatagcaatga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892278 20 + 64411610 Ttatttttaaatagcaatga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6309876 20 - 8369475 Ttatttttaaatagcaatga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902441 20 - 106955855 ttatttttaaatagcaatga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30213899 20 + 53671032 ttatttttaaatgacaatga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667629 20 + 59248254 ttatttttaaatgacaatga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4534144 20 - 13342542 TCAtttttaaatgacaatga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5464380 20 + 7714307 ttatttttaaatgacaatga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270497 20 + 50890351 ttatttttaaatggcaatga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895503 20 - 2385121 ttatttttaaatgacaatga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2335800 20 + 4274983 ttatttttaaatggcaatga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28566937 20 + 49145316 Ttattttttaatagcaatga i calJac3.chr22 I 297 C 0 s saiBol1.JH378197 5413279 20 + 8899380 ttactttttaatagcaatga i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1617946 20 - 2680843 Ttattttttaatagcaatga i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 368063 20 - 4471408 Ttattttttaatagcaatga i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5485802 5 + 5549422 ---------------aatga i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 342459 20 + 643850 ttgtttttaggcggcactgg i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 581867 1257 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e mm10.chr7 111097602 574 - 145441459 I e canFam3.chr1 4617392 242 - 122678785 I a score=611199.000000 s hg38.chr19_GL383574v1_alt 77538 64 + 155864 -----ggtctcact---tcgttgccc------aggctggtctc-taact-cctgggctcaaatgatcctcccatcttggc s panTro5.chr19 36146107 64 + 61309027 -----ggtctcact---tcgttgccc------aggctggtctc-taact-cctgggctcaaatgatcctcccatcttggc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892298 64 + 64411610 -----ggtctcact---tcgttgccc------aggctgatctc-taact-cctgggctcaaatgatcctcccatcttggc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6309896 64 - 8369475 -----ggtctcact---tcgttgccc------aggctggtctc-taact-cctgggctcaaatgatcctcccatcttggc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902461 64 - 106955855 -----ggtctcact---tcgttgccc------aggctggtctc-taact-catgggctcaaatgatcctcccatcttggc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30213919 65 + 53671032 -----ggtctcact---tcgtcgccc------aggctggtctcttcact-cctgggctcaaatgatcctcccaacttggc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667649 68 + 59248254 -----ggtctcacttcgtcgtcgccc------aggctggtctcttcact-cctgggctcaaatgatcctcccatcttggc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4534164 65 - 13342542 -----ggtctcact---tcgtcgccc------aggctggtctcttcact-cctgggctcaaatgatcctcccatcttggc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5464400 65 + 7714307 -----ggtctcact---tcatcgccc------aggctggtctcttaact-cctgggctcaaatgatcctcccatcttggc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270517 65 + 50890351 -----ggtctcact---tcattgccc------aggctggtctcttaact-cctgggctcacatgatcctcccatcttggc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895523 65 - 2385121 -----ggtctcact---tcgtcgccc------aggctggtctcttaatt-cctgggctcaaatgatcctcccatcttggc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2335820 65 + 4274983 -----ggtctcact---tcgttgccc------aggctagtctcttaact-cctgggctcaaatgatcctcccatcttggc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28566957 68 + 49145316 -----ggtctcacc---ctgttgccc---aggaggctggtctcttaact-cctgggctcaaacaatcctcccatcttggc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5413299 68 + 8899380 -----ggtctcacc---ttgttgccc---aggaggctggtctcttaact-cctgggctcaaacgatcttcccttcttggc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1617966 68 - 2680843 -----ggtctcacc---ttgttgcca---aggaggctggtctcttaact-cctgggctcaaacaatcctcccatcttggc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 368083 68 - 4471408 -----ggtctcacc---ttgttgcct---gggaggctggtctcttaact-gttgggctcaaacgatcctcccatcttgac i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 342479 74 + 643850 gaactgagcccagg---accttgccctgtgggaagcaggtgct-caactacttaagccacatccattcccTCA--TTGGC i dasNov3.JH563638 C 0 I 416 e proCoq1.NW_012149263v1 581867 1257 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e otoGar3.GL873654 5485807 0 + 5549422 C e mm10.chr7 111097602 574 - 145441459 I e canFam3.chr1 4617392 242 - 122678785 I a score=423216.000000 s hg38.chr19_GL383574v1_alt 77602 46 + 155864 ctcccaaagtgctag-attacagacatgagccaccaggcccggccat s panTro5.chr19 36146171 46 + 61309027 ctcccaaagtgctag-attacagacatgagccacgaggcccggccat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892362 46 + 64411610 ctcccaaagtgctag-attacagacatgagccaccaggcccggccat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6309960 45 - 8369475 ctcccaaagtgctag-attacagacatgagccaccaggccc-gccat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902525 46 - 106955855 ctcccaaagtgctag-attacagacatgagccaccatgcccggccat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30213984 47 + 53671032 ctcccaaagtgctagaattacagacatgagccaccatgcccgaccat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667717 47 + 59248254 ctcccaaagtgctagaattacagacatgagccaccatgcccgaccat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4534229 47 - 13342542 ctcccaaagtgctagaattacagacatgagccaccatgcccgaccat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5464465 47 + 7714307 ctcccaaagtgctagaattacagacgtgagccaccatgcccgaccat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270582 45 + 50890351 cttccaaagtgctaggattacacac--gagccaccatgcccgaccat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895588 47 - 2385121 ctcccaaagtgctagaattacagacgtgagccaccatgcccaaccat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2335885 47 + 4274983 ctcccaaagtgctaggattacaggcatgagccaccatgcccgaccat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28567025 47 + 49145316 ctcccaaagtgctaggattacagatatgagccaccataccccgccAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5413367 47 + 8899380 ctcccaaagtgctaggattacagatatgagacaccatacccagccat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1618034 47 - 2680843 ttcccaaagtgctgggattacagatatgagccacgatacccagccAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 368151 47 - 4471408 ctcccaaagtgctaggattacagatatgagccaccATAACCAACCAT i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 581867 1257 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e dasNov3.JH563638 342553 416 + 643850 I e otoGar3.GL873654 5485807 0 + 5549422 C e mm10.chr7 111097602 574 - 145441459 I e canFam3.chr1 4617392 242 - 122678785 I a score=1755979.000000 s hg38.chr19_GL383574v1_alt 77648 189 + 155864 gacacattctgagaaatgtgttaagcaatgtcatcattgtgtgaacatcagagagtgtac-tacacaaatgaagatggtatggcctactccacacctaagctatat----ggtgtagcctgttgctcctc-------gctacaaacctgtacagcatgttactgtactgaatactgtaggcagtcataacacagtg----gtatt s panTro5.chr19 36146217 189 + 61309027 gacacattctgagaaatgtgttaagcaatgtcatcattgtgtgaacatcagagagtgtac-tacacaaacgaagatggtatggcctactccacacctaggctatat----ggtgtagcctgttgctcctc-------gctacaaacctgtacagcatgttactgtactgaatactgtaggcagtcataacacagtg----gtatt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892408 189 + 64411610 gacacattctgagaaatgtgttaagcaatgtcatcattgtgtgaacatcagagagtgtac-tacacaaacgaagatggtatggcctactccacacctaggctatat----ggtgtagcctgttgctcctc-------gctacaaacctgtacagcatgttactgtactgaatactgtaggcagtcataacacagtg----gtatt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310005 189 - 8369475 gacacattctgagaaatgtgttaagcaatgtcgtcattgtgtgaacatcagagagtgtac-tacacaaaagaagatggtatggcctactccacacctaggctatat----ggtgtagcctgttgctcctc-------gctacaaacctgtacagcatgttactgtactgaatactgtaggcagtcataacacagtg----gtatt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902571 194 - 106955855 gacacattctgagaaatgtgttaagcagtgtcatcattgtgtgagcatcagagagtgcac-tacacaaaccaagatggtatggcctactccacacctaggctatat----ggtgtagcctgttgctcctc------ggctacaaacctgtacggcatgttactgtactgaatactgtaggcagtcataacacgggggtaagtatt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30214031 187 + 53671032 gacacattctgagaaatgtgttaagcaatgtcatcattgtgtgaacgtcagagagtgcac-tacacaaaccgagatggtatggcctactgcacacctaggctatgt----ggtatagcctgttgctcctc------agctacaaa-ctgtacagcatgttactgtactgaatactgtaggcagtcataacacgg------gtatt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667764 187 + 59248254 gacacattctgagaaatgtgttaagcaatgtcatcattgtgtgaacgtcagagagtgcac-tacacaaaccgagatggtatggcctactgcacacctaggctatgt----ggtatagcctgttgctcctc------agctacaaa-ctgtacagcatgttactgtactgaatactgtaggcagtcataacacgg------gtatt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4534276 187 - 13342542 gacacattctgagaaatgtgttaagcaacgtcatcattgtgtgaacgtcagagagcgcac-tacacaaaccgagatggtatggcctactgcacacctaggctatgt----ggtatagcctgttgctcctc------agctacaaa-ctgtacagcatgttactgtactgaatactgtaggcagtcataacacgg------gtatt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5464512 191 + 7714307 gacacattctgagaaatgtgttaagcaatgtcatcattgtgtgaacgtcagagagtgcac-tacacaaaccgagatggtatggcctactccacacctaggctatgt----ggtatagcctgttgctcctc------agctacaaa-ctgtacagcatgttactgtactgaatactgtaggcagtcataacacgggt--aagtatt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270627 195 + 50890351 gacacattctgagaaacgtgttaagcaatgtcatcattgtgtgaacgtcagagagtgcac-tacacaaactgagatggtatggcctactccacacctaggctatgtggtaggtatagcctgttgctcctc------agctacaaa-ctgtacagcatgttactgtactgaatactgtaggcagtcataacacaggt--aagtatt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895635 176 - 2385121 gacacattctgagaaatgtgttaagcaatgtcatcattgtgtgaacgtcagagagtgcag-tacacaaaccgagatggtatggcctactccacacctaggctatgt----ggtatagcctgttgctcctc------agctacaa----------------actgtactgaatactataggcagtcataacacgggt--aagtatt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2335932 191 + 4274983 gacacattctgagaaatgtggtaagcaatgtcatcattgtgtgaatgtcagagagtgcac-cacacaaaccgagatggtatggcctactccacacctaggctatat----ggtatagcctgttgctcctc------agccacaaa-ctgtacagcatgttactggactgaatactgtaggcagtcataacacgggt--aagtatt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28567072 190 + 49145316 gacaccttctgagaaatgtgttaagcgatg---tcattgtgtagacctcagagagtatac-catacaaactgagatggtatggcctactccacacctaggctatat----agtgtagcctgttgctcctccatgcaaactacaaacttgcaca-----ttactgtattgaatactgtaggcagtcataacacaggt--aaatatt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5413414 195 + 8899380 gacacattctgagaaatgtgttaagcaatg---tcatggtgtagacatgagagagtatac-tatacaaactgagatggtatggcctactccacacctaagctattt----agtgtaacctgttgctcctccctgcaaactacagacttgcacagcacgttactgtactgaatactgtaggcagtcataacacaggt--aaatatt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1618081 195 - 2680843 GACAAAttccgagaaatgtgttaagcgatg---tcattgtgtagacatcagagggtatac-tatacaaactgagatggtatggcctactccacacctaggctatat----agtgtagcctgttgctcctccatgcaaactacaaacttacacaacacgttactgtgctgaatactgtaggcagtcataacacaggt--aaatatg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 368198 195 - 4471408 gacacattctgagaaatgtgttaagtgatg---tcattgtgtagacatcagagagtatac-tatacaaactgagatggtatggcctacttcacacctaggctatat----agtgtagcctgttgctcctccatgcaaactacaaacttgcacagcacgttactgtactgaatactgtaggcagtcataacacaggt--aaatatt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5485807 139 + 5549422 aacac-------------tgttaagcaatt---tcattgtgtgaacatcgtagagtatgcatactcagacctggattggatagccacctacacacctaggctgcaa----a---------------cctg-----------------tatacagcatggtactgtactga----------caattggaacacagtg----gcatt i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 581867 1257 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e dasNov3.JH563638 342553 416 + 643850 I e mm10.chr7 111097602 574 - 145441459 I e canFam3.chr1 4617392 242 - 122678785 I a score=13923.000000 s hg38.chr19_GL383574v1_alt 77837 1 + 155864 t s panTro5.chr19 36146406 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892597 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310194 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902765 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30214218 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667951 1 + 59248254 t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4534463 1 - 13342542 t i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5464703 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270822 1 + 50890351 t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895811 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2336123 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28567262 1 + 49145316 t i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5413609 1 + 8899380 t i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1618276 1 - 2680843 t i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 368393 1 - 4471408 t i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5485946 1 + 5549422 t i otoGar3.GL873654 C 0 I 1554 s canFam3.chr1 4617634 1 - 122678785 t i canFam3.chr1 I 242 C 0 e proCoq1.NW_012149263v1 581867 1257 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e dasNov3.JH563638 342553 416 + 643850 I e mm10.chr7 111097602 574 - 145441459 I a score=949068.000000 s hg38.chr19_GL383574v1_alt 77838 115 + 155864 ctgtatttaaaacatatctaaac--agaaaaagtatagtaaaaatacggtatcataatctttgggaccaccattg-tatacccagtccatcgttgaccaaaacatcattaagtggtgc s panTro5.chr19 36146407 115 + 61309027 ctgtatttaaaacatatctaaac--agaaaaagtatagtaaaaatacggtgtcataatctttgggaccaccattg-tatacccagtccatcgttgaccaaaacatcattaagtggtgc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892598 115 + 64411610 ctgtatttaaaacatatctaaac--agaaaaagtatagtaaaaatacggtgtcataatctttgggaccaccattg-tatacccagtccatcgttgaccaaaacatcattaagtggtgc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310195 115 - 8369475 ctgtatgtaaaacatatctaaac--agaaaaagtatagtaaaaatacggtatcataatctttgggaccaccattg-tatacccagtccatcgttgaccaaaacatcattaagtggtgc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902766 117 - 106955855 ctgtatttaaaacatatctaaacatagaaaaagtatagtaaaaatagggtatcataaactttgggaccaccattg-tatacgcagtccatcgttgaccaaaacatcattaagtggtgc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30214219 116 + 53671032 ctgtaatt-aaacacatctaaacatagagaaagtatagtaaaagtagggtatcataatctttgggaccaccatcg-tatacgcagtccctcgttgaccaaaacatcattaagtggtgc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34667952 116 + 59248254 ctgtaatt-aaacacatctaaacatagagaaagtatagtaaaagtagggtatcataatctttgggaccaccatcg-tatacgcagtccctcgttgaccaaaacatcattaagtggtgc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4534464 116 - 13342542 ctgtaatt-aaacacatctaaacatagagaaagtatagtaaaagtagggtatcataatctttgggaccaccatcg-tatacgcagtccctcgttgaccaaaacatcattaagtggtgc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5464704 116 + 7714307 ctgtaatt-aaacacatctaaacatagagaaagtatagtaaaagtagggtatcataatctttgggaccaccatcg-tatacgcagtcccttgttgaccaaaacatcattaagtggtgc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270823 116 + 50890351 ctgtaatt-aaacacatctaaacatagagaaagtatagtaaaagtagggtattacaatctttgggaccaccatcg-tatacacagtccctcgttgaccaaaacatcattaagtggtgc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895812 116 - 2385121 ctgtaatt-aaacacatctaaacatagagaaagtatagtaaaagtagggtatcataatctttcggaccaccatcg-tatacacagtccctcgttgaccaaaacatcattaagtggtgc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2336124 116 + 4274983 ctgtaatt-aaacacatctaagcatagagaaagtatagtaaaagtcgggtattacagtctttgggaccaccattg-tatacgcagtccctcgttgaccaaaacatccttaagtggtgc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28567263 110 + 49145316 ctgtattt-aaacatacttaaacatagta----tatagtaaaaattgggtatcataatctttgggaccaccattg-tttacgcagtc-attgttgaccaaac-attattaagtggtac i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5413610 107 + 8899380 ctgtattt-aaacatacctaaacatagtg----tatagtaaaaattgggtatcataatctttgggaccaccgttgttttacacagtc---cattgaccaaaa---cattaagtggtac i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1618277 112 - 2680843 ctgtattt-aaacatacctaaacatagta----tatagtaaaaattgggtattataatctttgggaccaccgttg-tttacacagtccatcgttgaccaaaacattattaagtggtat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 368394 109 - 4471408 ctgtgttt-aaacatacctaaacatagta----tatagtaaaaattgggtatcataatctttgggaccac---tg-tttacacagtccatcgttgaccaaaacattattaagtggtac i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4617635 66 - 122678785 ctttTTTT-AAAAAAGTAAGAGC----CAAAAAAATAATAAGAGTAAGG-------------------------G-----------CCAGCGATGGCAAAAATCCTA----------- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 581867 1257 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e dasNov3.JH563638 342553 416 + 643850 I e otoGar3.GL873654 5485947 1554 + 5549422 I e mm10.chr7 111097602 574 - 145441459 I a score=914640.000000 s hg38.chr19_GL383574v1_alt 77953 90 + 155864 gtgaGTACTGAGGAAtgtgaggggatgtgttttggttgtcacaatcactggggatcaccactggtatttaaaagtaagggcccgg-atggt s panTro5.chr19 36146522 90 + 61309027 gtgaGTACTGAGGAAtgtgaggggatgtgttttggttgtcacaatcactggggatcaccactggtatttaaaagtaagggcccgg-atggt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892713 90 + 64411610 gtgaGTAGTGAGGaatgtgaggggatgtgttttggttgtcacaatcactggggatcaccactggtatttaaaagtaagggcccgg-atggt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310310 90 - 8369475 gtgaGTACTGAGGAAtgtgaggggatgtgttttggttgtcacaatcactgaggatcaccactggtatttaaaagtaagggcctgg-atggt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902883 90 - 106955855 gtgaGTACTGAGGaatgtgaggggatgtgttttggttgtcacaatcactggggatcatcactggtatttgaaagtaagggcccgg-atggt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30214335 90 + 53671032 atgaGTACTGAggaatgtgaggggatatgttttggttgtcacaatgactggggatcaccactggtatttaaaaggaagggcccgg-atgat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34668068 90 + 59248254 atgaGTACTGAggaatgtgaggggatatgttttggttgtcacaatgactggggatcaccactggtatttaaaaggaagggcccgg-atggt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4534580 90 - 13342542 atgaGTACTGAggaatgtgaggggatatgttttggttgtcacaatgactggggatcaccactggtatttaaaaggaagggcccgg-atgat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5464820 90 + 7714307 atgaGTACTGAggaatgtgaggggatatgttttggttgtcacaatgactggggatcaccactggcatttaaaaggaagggcccag-atggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29270939 90 + 50890351 atgaGTACTGAGGaatgtgaggggatgtgttttggttgtcacaatgactggggatcaccactggtatttaaaaggaagggcccgg-atggt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 895928 90 - 2385121 atgaGTACTGAggaatgtgaggggatatgttttggttgtcacaatgactggggatcaccactggtatttaaaaggaagggcccgg-atggt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2336240 89 + 4274983 atgaGTACTGAGGAATGTGAGGGGATGTGTTTTGATTGTCA-AACGACTGGGGATCATCACTAGTATTTAAAAGGAAGGGCCCGG-ATGGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28567373 88 + 49145316 atgactACTGAGGaatgtgaggggatgtgttttggttgtcacaatgac--gggatcaccactgctatttaaaagtaagggcctgg-atggt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5413717 88 + 8899380 atgactACTGAggaatgtgaggggatatattttggttgtcacaatgtt--gggatcaccactgctatttaaaagtaagggcctgg-atggt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1618389 90 - 2680843 atgactACTGAggaacctgaggggatgtgttttggttgtcacaatgactggggatcaccactgctatttaaaagtaagggcccgg-atggt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 368503 89 - 4471408 atgactACTGAGGaatgtgaggggatttgttttggttgtcacaatgactggggatcaccactgctatttaaaagtaagggcctgg-at-gt i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4617701 20 - 122678785 ----------------------------------------------------------CACTA----TAAAAAAAAAATGCT--------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 342969 90 + 643850 aggaacatatagaaatgtgaggggatgt-ttttgatcgtcacaatgaccagggaccaccactagcttttaagagtaagggccaggaatggt i dasNov3.JH563638 I 416 I 132 e proCoq1.NW_012149263v1 581867 1257 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e otoGar3.GL873654 5485947 1554 + 5549422 I e mm10.chr7 111097602 574 - 145441459 I a score=99690.000000 s hg38.chr19_GL383574v1_alt 78043 9 + 155864 aaatgtcct s panTro5.chr19 36146612 9 + 61309027 aaatgtcct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892803 9 + 64411610 aaatgtcct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310400 9 - 8369475 aaatgtcct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902973 9 - 106955855 aaatgtcct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30214425 9 + 53671032 aaatgtcct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34668158 9 + 59248254 aaatgtcct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4534670 9 - 13342542 aaatgtcct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5464910 9 + 7714307 aaatgtcct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29271029 9 + 50890351 aaatgtcct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 896018 9 - 2385121 aaatgtcct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2336329 9 + 4274983 AAATGTCCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28567461 9 + 49145316 aaatgtcct i calJac3.chr22 C 0 I 5 s saiBol1.JH378197 5413805 9 + 8899380 aaacgtcct i saiBol1.JH378197 C 0 I 5 s cebCap1.NW_016107633v1 1618479 9 - 2680843 aaatgtcct i cebCap1.NW_016107633v1 C 0 I 1096 s aotNan1.NW_018505377v1 368592 9 - 4471408 aaatgtcct i aotNan1.NW_018505377v1 C 0 I 5 e proCoq1.NW_012149263v1 581867 1257 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e dasNov3.JH563638 343059 132 + 643850 I e otoGar3.GL873654 5485947 1554 + 5549422 I e mm10.chr7 111097602 574 - 145441459 I e canFam3.chr1 4617721 0 - 122678785 C a score=615849.000000 s hg38.chr19_GL383574v1_alt 78052 72 + 155864 gtgct-----gtgccacacaatcAGTTGTCCAACCCAAAGTGCAGTAGT-GCTCCTCTACTCTGAG-AAACACTGGCTA s panTro5.chr19 36146621 72 + 61309027 atgct-----gtgccacacaatcAGTTGTCCAACCCAAAGTGCAGTAGT-GCCCCTCTACTCTGAG-AAACACTGGCTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892812 72 + 64411610 atgct-----gtgccacacaatcagttgtccaacccaaagtgcagtagt-gccCCTCTACTCTGAG-AAACACTGGCTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310409 72 - 8369475 gtgct-----gtgccacacaatcAATTGTCCAACCCAAAGTGCAGTAGT-GCCCCTCTACTCTGAG-AAACACTGGCTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63902982 72 - 106955855 atgcg-----gtgccacacaataaattatccaacccaaagtgcagcagt-gccCCTCTACTCCGAG-AAACACTGGCTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30214434 72 + 53671032 atgct-----gtgccacacaataaattatccaacccaaagtgcagtagt-gGCCCTCTATTCTGAG-AAACAGTGGCTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34668167 72 + 59248254 atgct-----gtgccacacaataaattatccaacccaaagtgcagtagt-gccCCTCTATTCTGAG-AAACAGTGGCTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4534679 72 - 13342542 atgct-----gtgccacacaatgaattatccaacccaaagtgcagtagt-gccCCTCTATTCTGAG-AAACAGTGGCTA i macNem1.NW_012011689v1 C 0 I 314 s cerAty1.NW_012005268v1 5464919 71 + 7714307 atgct-----gtgccacacaataaattatccaaccc-aagtgcagtagt-gccCCTCTATTCTGAG-AAACAGTGGCTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29271038 72 + 50890351 atgct-----gtgccacacaataaattatccaacccaaagtgcagtagt-gccCCTCTATTCTGAG-AAACAGTGGCTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 896027 72 - 2385121 atgct-----gtgccacacaataaattatccaacccaaagtgcagtagt-gccCCTCTATTCTGAG-AAACAGTGGCTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2336338 72 + 4274983 ATGCT-----CTGCCACACAATGAATTATCCAACCCAAAGTGCAGTAGT-GCCCCTCTGTTCTGAG-AAAGAGTGGCTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28567475 77 + 49145316 gtgctctacagtgccacaaaataaattttccaattcagagtgcagtagt-gcccctgtactctgag-aaatactgGCTA i calJac3.chr22 I 5 C 0 s saiBol1.JH378197 5413819 76 + 8899380 gtgctctacagtgccacaaaataaattttccaactc-gagtgcagtagt-gccCCTCTACTCTGAG-AAATACTGGCTA i saiBol1.JH378197 I 5 C 0 s aotNan1.NW_018505377v1 368606 77 - 4471408 gtgctctacagtgccacaaaataaattttccaactcagagtgcagtagt-gtcCCTCTACTCTGAG-AAATACTGGCTG i aotNan1.NW_018505377v1 I 5 C 0 s canFam3.chr1 4617721 70 - 122678785 GGGTG-----GTGCCACAT----AGCTATCCAGCCCAAAGTGCCACGGTGGCCCTTCCAATCTGAGAAAATACTGGCTG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 581867 1257 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e dasNov3.JH563638 343059 132 + 643850 I e otoGar3.GL873654 5485947 1554 + 5549422 I e mm10.chr7 111097602 574 - 145441459 I e cebCap1.NW_016107633v1 1618488 1096 - 2680843 I a score=549943.000000 s hg38.chr19_GL383574v1_alt 78124 56 + 155864 AAGTCCCTCCACATGGAAAGACAGTAAGTGGGAAATTATTTCCTGCCAACTTGAAA s panTro5.chr19 36146693 56 + 61309027 AAGTCCCTCCACATGGAAAGACAGTAAGTGGGAAATTATTTCCTGCCAACTTGAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892884 55 + 64411610 AAGTCCCTCCACATGGAAAGACAGTAAGTGGGAAATTATTTCCTGCCAACTTG-AA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310481 56 - 8369475 AAGTCCCTCCACATGGAAAGACAGTAAGTGGGAAATTATTTCCTGCCAACTTGAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63903054 56 - 106955855 AAGTCCCTCCACATGGAAAGACAGTAAGTGGGAAATGATTTCCTGCCAACTTGAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30214506 56 + 53671032 AAGTCCCTCCACATGGAAAGACAGTAAGTGAGAAATTATTTCCTGCCAACTTGAAA i rheMac8.chr19 C 0 I 3 s macFas5.chr19 34668239 56 + 59248254 AAGTCCCTCCACATGGAAAGACAGTAAGTGAGAAATTATTTCCTGCCAACTTGAAA i macFas5.chr19 C 0 I 3 s macNem1.NW_012011689v1 4535065 56 - 13342542 AAGTCCCTCCACATGGAAAGACAGTAAGTGAGAAATTATTTCCTGCCAACTTGAAC i macNem1.NW_012011689v1 I 314 I 3 s cerAty1.NW_012005268v1 5464990 56 + 7714307 AAGTCCCTCCACATGGAAAGACAGTAAGTGAGAAATTATTTCCTGCCAACTTGAAA i cerAty1.NW_012005268v1 C 0 I 4 s chlSab2.chr6 29271110 56 + 50890351 AAGTCCCTCCACATGGAAAGACAGTAAGTGGGAAATTATTTCCTGCCAACTTGAAA i chlSab2.chr6 C 0 I 3 s manLeu1.NW_012102454v1 896099 56 - 2385121 AAGTCCCTCCACATGGAAAGACAGTAAGTGAGAAATTATTTCCTGCCAACTTGAAA i manLeu1.NW_012102454v1 C 0 I 3 s colAng1.NW_012111697v1 2336410 56 + 4274983 AAGTCCCTCCACATGGAAAGACAGTAAGTGGGAAATTATTTCCTGCCAACTTGAAA i colAng1.NW_012111697v1 C 0 I 318 s calJac3.chr22 28567552 56 + 49145316 AAGTCCCTCCACATGGAAAGACAGTCAGTGGAAAATTGTTTCCTGCCAACCTAAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5413895 56 + 8899380 AAGTCCCTCCACATGGAAAGACAGTAAGTGGAAAGTTGTTTCCTGCCAACCTAAAA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 368683 56 - 4471408 AAGTCCCTCCACATGGAAAGACGGTAAGTGGAAAATTGTTTCCTGCCAACCTAAAA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4617791 56 - 122678785 AGGTCTCTCTACATGAAAAGATCATGAGTGGGGAATTAATTCTTTCCCTCCCCAAA i canFam3.chr1 C 0 I 6 e proCoq1.NW_012149263v1 581867 1257 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e dasNov3.JH563638 343059 132 + 643850 I e otoGar3.GL873654 5485947 1554 + 5549422 I e mm10.chr7 111097602 574 - 145441459 I e cebCap1.NW_016107633v1 1618488 1096 - 2680843 I a score=119457.000000 s hg38.chr19_GL383574v1_alt 78180 13 + 155864 AAAAAA--ATTTACT s panTro5.chr19 36146749 13 + 61309027 AAAAAA--ATTTACT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892939 13 + 64411610 AAAAAA--ATTTACT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310537 15 - 8369475 AAAAAAACATTTACT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63903110 13 - 106955855 AAAACA--ATTTACT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30214565 13 + 53671032 AAAAAA--ATTTACT i rheMac8.chr19 I 3 C 0 s macFas5.chr19 34668298 13 + 59248254 AAAAAA--ATTTACT i macFas5.chr19 I 3 C 0 s macNem1.NW_012011689v1 4535124 13 - 13342542 AAAAAA--ATTTACT i macNem1.NW_012011689v1 I 3 C 0 s cerAty1.NW_012005268v1 5465050 13 + 7714307 AAAAAA--ATTTACT i cerAty1.NW_012005268v1 I 4 C 0 s chlSab2.chr6 29271169 13 + 50890351 AAAAAA--ATTTACT i chlSab2.chr6 I 3 C 0 s manLeu1.NW_012102454v1 896158 13 - 2385121 AAAAAA--ATTTACT i manLeu1.NW_012102454v1 I 3 C 0 s colAng1.NW_012111697v1 2336784 13 + 4274983 aaaaAA--GTTTACT i colAng1.NW_012111697v1 I 318 C 0 s calJac3.chr22 28567608 13 + 49145316 AGAAAA--GTTTACT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5413951 13 + 8899380 AGAAAA--GTTTACT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 368739 13 - 4471408 AGAAAA--GTTTACT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4617853 13 - 122678785 AAAAAC--ATTTACT i canFam3.chr1 I 6 C 0 e proCoq1.NW_012149263v1 581867 1257 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e dasNov3.JH563638 343059 132 + 643850 I e otoGar3.GL873654 5485947 1554 + 5549422 I e mm10.chr7 111097602 574 - 145441459 I e cebCap1.NW_016107633v1 1618488 1096 - 2680843 I a score=596445.000000 s hg38.chr19_GL383574v1_alt 78193 80 + 155864 ACTTAGGAAATTGTCCGCTTG------------------GGAATATTAA---------TAA--TAAAGGGAACTTACTTCCTGTAGCAC-ATCAGCATTGTGGAAA--CATT s panTro5.chr19 36146762 80 + 61309027 ACTTAGGAAATTGTCCGCTTG------------------GGAATATTAA---------TAA--TAAAGGGAACTTACTTCCTGTAGCAC-ATCAGCATTGTGGAAA--CATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39892952 80 + 64411610 ACTTAGGAAATTGTCCGCTTG------------------GGAATATTAA---------TAA--TAAAGGGAACTTACTTCCTTTAGCAC-ATCGGCATTGTGGAAA--CATT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310552 80 - 8369475 ACTTAGGAAATTGTCCTCATG------------------GGAATATTAA---------TAA--TAAAGGGAACTTACTTCCTGTAGCAC-ATCAGCATTGTGGAAA--CATT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63903123 79 - 106955855 ACTTAGGAAATTGTCCGCATG------------------GGAGTATTAA---------T-A--TAAAGGGAACTTACTTCCCATAGCACTGTCAGCATTGTGGAAA--CAT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30214578 80 + 53671032 GCTTAGGAAATTGTCCGCATG------------------GGAGTATTAA---------T-A--TAAAGGGAACTTACTTCCCGTAGCACTGTCAGTATTGTAGAAA--CATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34668311 80 + 59248254 GCTTAGGAAATTGTCCGCATG------------------GGAGTATTAA---------T-A--TAAAGGGAACTTACTTCCCGTAGCACTGTCAGTATTGTAGAAA--CATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4535137 80 - 13342542 GCTTAGGAAAGTGTCCGCATG------------------GGAGTATTAA---------T-A--TAAAGGGAACTTACTTCCCGTAGCACTGTCAGTATTGTAGAAA--CATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5465063 80 + 7714307 GCTTAGGAAATTGTCCGCATG------------------GGAGTATTAA---------T-A--TAAAGGGAACTTACTTGCCGTAGCACTGTCAGTATTGTAGAAA--CATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29271182 80 + 50890351 ACTTAGGAAATTGTCCGCATG------------------GGAGTATTAA---------T-A--TAAAGGGAACTTACTTCCCGTAGCACTGTCAGTATTGTAGAAA--CATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 896171 80 - 2385121 GCTTAGGAAATTGTCTGCATG------------------GGAGTATTAA---------T-A--TAAAGGGAACTTACTTCCCGTAGCACTGTCAGTATTGTAGAAA--CATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2336797 80 + 4274983 ACTTAGGAAATTTTCCGCGTG------------------GGAGTATTAA---------T-A--TAAAGGGAACTTACTTCCCGTAGCACTGTCAGTATTGTAGAAA--CATT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28567621 92 + 49145316 ACTTAGGAAATTGTCTGTATGGGATATGAAAGGAC----AAAGTATTAC---------T-A--TAAAGGGA----ACTTCCAGTTGCACTGTCAGCATTGTAGAAACCCATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5413964 96 + 8899380 ACTTAGGAAATTGTCTGTATGGGATATGAAAGGACAAAGAAAGCATTAC---------T-A--TAAAGGGA----ACTTCCAGTAGCACTGTCAGCATTGTAGAAACCCATT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 368752 92 - 4471408 ACTTAGGAAATTTTCTGTATGGGATATGAAAGGAC----AAAGTATTAC---------T-A--TAAAGGGA----ACTTCCAGTAGCACTGTCAGCATTGTAGAAACCCATT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4617866 86 - 122678785 GA--AAAAAATTGTCTTTACAT-----------------GGAATATGAAAGGACAAGGT-A--TAAAGGGACCTTACTTCCAGTGACAC----AATGTTTTGGAAAGCCATT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 343191 73 + 643850 ACTTAAGAAATTATCTCTACAT-----------------GGGATATTAG---------C-AGTCAAGGTTACCTTACTTCCAGTAGCACAGTCAACATTG------------ i dasNov3.JH563638 I 132 C 0 e proCoq1.NW_012149263v1 581867 1257 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e otoGar3.GL873654 5485947 1554 + 5549422 I e mm10.chr7 111097602 574 - 145441459 I e cebCap1.NW_016107633v1 1618488 1096 - 2680843 I a score=661831.000000 s hg38.chr19_GL383574v1_alt 78273 64 + 155864 ACCACATAGGAGTTAGGGCTTCATCCTGT-TCTCTGTC----AGTGCTTCACAAATCTCTGATCAGAAT s panTro5.chr19 36146842 64 + 61309027 ACCACATAGGAGTTAGGGCTTCATCCTGT-TCTCTGTC----AGTGCTTCACAAATCTCTGATCAGAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39893032 64 + 64411610 ACCACATAGGAGTTAGGGCTTCATCCTGT-TCTCTGTc----agtgcttcacaaatctctgatcagaat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310632 64 - 8369475 GTCACATAGGAGTTAGGGCTTCTTCCTGT-TCTCTGTc----agtgcttcacaaatctctgatcagaat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63903202 60 - 106955855 --CACATAGGAGTTAGGGCTTCATCCTGT-TCTCTGTC----AGTGCTTCACAAGTCTC--ATCAGAAT i nomLeu3.chr10 C 0 I 303 s rheMac8.chr19 30214658 64 + 53671032 ATCACATAGGAGTTAGGGCTTCATCCTGT-TCTCTATc----aatgcttcacaaatctctgatcagaat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34668391 64 + 59248254 ATCACATAGGAGTTAGGGCTTCATCCTGT-TCTCTATc----aatgcttcacaaatctctgatcagaat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4535217 64 - 13342542 ATCACATAGGAGTTAGGGCTTCATCCTGT-TCTCTATc----aatgcttcacaaatctctgatcagaat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5465143 64 + 7714307 ATCACATAGGAGTTACGGCTTCATCCTGT-TCTCTATC----AATTCTTCACAAATCTCTGatcagaat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29271262 64 + 50890351 ATCACATAGGAGTTAGGGCTTCATCCTGT-TCTCTATG----AATGCTTCACAAATCTCTGatcagaat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 896251 64 - 2385121 ATCACATAGGAGTTAGGGCTTCATCCTGT-TCTCTATc----aatgcttcacaaatctctgatcagaat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2336877 64 + 4274983 ATCACATAGGAGTTAGGGCTTCATCCTGT-TCTCTGTc----agtgcttcacaaatctctgatcagaat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28567713 65 + 49145316 ATCACATAGGCATTAGGGCTTCATTCTGTTACTCTGTc----agtggttcacaaatctctgatcagaat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5414060 62 + 8899380 ATCACATAGGCGTTAGGGCTTTATTCTGT---TCTGGc----agtggttcacaaatctctgatcagaat i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 368844 64 - 4471408 ATTACATAGGCGTTAGGGCTTCATTCTGT-TCTCTGTc----agtggttcacaaatctctgatcagaat i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 583124 64 + 2501019 ACCACATAGCAGTTACCACTTCATCATGT-TCTCCATC----AGTGGTTCACAAATCTCTGATCAGAAT i proCoq1.NW_012149263v1 I 1257 C 0 s canFam3.chr1 4617952 66 - 122678785 --ATCATAGGAATTCCCAGTTCATCCCAG-TCTCTCTCAAGAAATGGTTCACAAATTTCTTCTCCACAT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 343264 48 + 643850 --------------ACTACTCCATGCTGT---TTTGCc----agtagttcacaaacctctgatcagaat i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3965360 1895 - 30143674 I e otoGar3.GL873654 5485947 1554 + 5549422 I e mm10.chr7 111097602 574 - 145441459 I e cebCap1.NW_016107633v1 1618488 1096 - 2680843 I a score=35207.000000 s hg38.chr19_GL383574v1_alt 78337 3 + 155864 CTA s panTro5.chr19 36146906 3 + 61309027 CTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39893096 3 + 64411610 cta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310696 3 - 8369475 cta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63903565 3 - 106955855 CTA i nomLeu3.chr10 I 303 C 0 s rheMac8.chr19 30214722 3 + 53671032 cta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34668455 3 + 59248254 cta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4535281 3 - 13342542 cta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5465207 3 + 7714307 cta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29271326 3 + 50890351 cta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 896315 3 - 2385121 cta i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2336941 3 + 4274983 cta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28567778 3 + 49145316 tta i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5414122 3 + 8899380 cta i saiBol1.JH378197 C 0 I 1310 s aotNan1.NW_018505377v1 368908 3 - 4471408 cta i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 583188 3 + 2501019 CTA i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4618018 3 - 122678785 CTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 343312 3 + 643850 caa i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3965360 1895 - 30143674 I e otoGar3.GL873654 5485947 1554 + 5549422 I e mm10.chr7 111097602 574 - 145441459 I e cebCap1.NW_016107633v1 1618488 1096 - 2680843 I a score=13600.000000 s hg38.chr19_GL383574v1_alt 78340 1 + 155864 C s panTro5.chr19 36146909 1 + 61309027 C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39893099 1 + 64411610 c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310699 1 - 8369475 c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63903568 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30214725 1 + 53671032 c i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34668458 1 + 59248254 c i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4535284 1 - 13342542 c i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5465210 1 + 7714307 c i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29271329 1 + 50890351 c i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 896318 1 - 2385121 c i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2336944 1 + 4274983 c i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28567781 1 + 49145316 c i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 368911 1 - 4471408 c i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 583191 1 + 2501019 C i proCoq1.NW_012149263v1 C 0 I 611 s canFam3.chr1 4618021 1 - 122678785 C i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 343315 1 + 643850 c i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3965360 1895 - 30143674 I e otoGar3.GL873654 5485947 1554 + 5549422 I e mm10.chr7 111097602 574 - 145441459 I e cebCap1.NW_016107633v1 1618488 1096 - 2680843 I e saiBol1.JH378197 5414125 1310 + 8899380 I a score=102432.000000 s hg38.chr19_GL383574v1_alt 78341 14 + 155864 CAAGGAGCATTTTT- s panTro5.chr19 36146910 14 + 61309027 CAAGGAGCATTTTT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39893100 14 + 64411610 caaggagcattttt- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310700 14 - 8369475 caaggagcattttt- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63903569 14 - 106955855 CGAGGAGCATTTTT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30214726 14 + 53671032 cgaggaacttttct- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34668459 14 + 59248254 cgaggaacttttct- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4535285 14 - 13342542 cgaggaacttttct- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5465211 14 + 7714307 tgaggaacttttct- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29271330 14 + 50890351 cgaggaacttttct- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 896319 14 - 2385121 tgaggaacttttct- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2336945 14 + 4274983 cgaggaacttttct- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28567782 14 + 49145316 cgaggagctttttt- i calJac3.chr22 C 0 I 971 s aotNan1.NW_018505377v1 368912 14 - 4471408 cgaggagctttttt- i aotNan1.NW_018505377v1 C 0 I 999 s canFam3.chr1 4618022 14 - 122678785 TGAGGAGCATTTTA- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 343316 15 + 643850 tgaggaccattttag i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 583192 611 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e otoGar3.GL873654 5485947 1554 + 5549422 I e mm10.chr7 111097602 574 - 145441459 I e cebCap1.NW_016107633v1 1618488 1096 - 2680843 I e saiBol1.JH378197 5414125 1310 + 8899380 I a score=279050.000000 s hg38.chr19_GL383574v1_alt 78355 38 + 155864 AAGTACAGAT-------TCCCAGG-----CCCAGAGAG--TGATTCTGAAGT s panTro5.chr19 36146924 38 + 61309027 AAGTACAGAT-------TCCCAGG-----CCCAGAGAG--TGATTCTGAAGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39893114 38 + 64411610 aagtacagat-------tcccagg-----cccagagag--tgattctgaagt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310714 40 - 8369475 aagtacagat-------tcccagg-----cccagagagtctgattctgaagt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63903583 40 - 106955855 AAGTACAGAT-------TCCCAGG-----CCCAGAGAGTCTGATTCTGAAGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30214740 40 + 53671032 aagtacagat-------tcccagg-----cccagagagtctgattctgaagt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34668473 40 + 59248254 aagtacagat-------tcccagg-----cccagagagtctgattctgaagt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4535299 40 - 13342542 aagtacagat-------tcccagg-----cccagagagtctgattctgaagt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5465225 40 + 7714307 aagtacagat-------tcccagg-----cccagagagtctgattctgaagt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29271344 40 + 50890351 aagtacagat-------tcccagg-----cccagagagtctgattctgaagt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 896333 40 - 2385121 aagtacagat-------tcccagg-----cccagagagtctgattctgaagt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2336959 40 + 4274983 aagtacagat-------tcccagg-----cccagagagtctgattctgaagt i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4618036 47 - 122678785 AAGTACAAATTCCCACATCCCACA-----CCTCAAGAGTCTGAACCTGAAGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 343331 45 + 643850 aagtacagac-------tcccaggtctcacccagaaattctgatttcaaaga i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 583192 611 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e otoGar3.GL873654 5485947 1554 + 5549422 I e mm10.chr7 111097602 574 - 145441459 I e aotNan1.NW_018505377v1 368926 999 - 4471408 I e cebCap1.NW_016107633v1 1618488 1096 - 2680843 I e saiBol1.JH378197 5414125 1310 + 8899380 I e calJac3.chr22 28567796 971 + 49145316 I a score=22698.000000 s hg38.chr19_GL383574v1_alt 78393 3 + 155864 TCC s panTro5.chr19 36146962 3 + 61309027 TCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39893152 3 + 64411610 tcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310754 3 - 8369475 tcC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63903623 3 - 106955855 TCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30214780 3 + 53671032 tcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34668513 3 + 59248254 tcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4535339 3 - 13342542 tcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5465265 3 + 7714307 tcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29271384 3 + 50890351 tcC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 896373 3 - 2385121 tcc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2336999 3 + 4274983 tcc i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4618083 3 - 122678785 TCC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 583192 611 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e dasNov3.JH563638 343376 0 + 643850 C e otoGar3.GL873654 5485947 1554 + 5549422 I e mm10.chr7 111097602 574 - 145441459 I e aotNan1.NW_018505377v1 368926 999 - 4471408 I e cebCap1.NW_016107633v1 1618488 1096 - 2680843 I e saiBol1.JH378197 5414125 1310 + 8899380 I e calJac3.chr22 28567796 971 + 49145316 I a score=2597136.000000 s hg38.chr19_GL383574v1_alt 78396 477 + 155864 CTAGTAcagcagaacccaacctttttggcaccagggactggtttcaccaaagacagtttttccacagatgagc---agggggtatggttttggggtgattcaag-----tatatttattgtgcactttatttctattattacattgtaatatataatgaaataattacacaattcaccatcatgtagaatcaatgggaggcctgagcttgttttcctgcaactagatggtcccatctgggggtgatgggagacagtgacagatcatcgggcatgatcagtgagtgcgcaaccgaggtccct----tgcatgcagagctcacgatagggtttccaaccctatgagaatctaatgctgctgctgatgtgacaggaggtggagctcggatggtaat----------------gctcactcatcagcccgcctctcacccgctgtgcaggctggttcctaacagaccacgga-------ccacgaccgttctgctgcccagggatcagggacccct s panTro5.chr19 36146965 477 + 61309027 CTAGTAcagcagaacccaacctttttggcaccagggactggtttcaccaaagacagtttttccacagatgagc---agggggtatggttttggggtgattcaag-----tatatttattgtgcactttatttctattattacattgtaatatataatgaaataattacacaattcaccatcatgtagaatcaatgggaggcctgagcttgttttcctgcaactagatggtcccatctgggggtgatgggagacagtgacagatcatcgggcatgatcagtgagtgcgcaaccgaggtccct----tgcatgcagagctcacgatagggttcccaaccctatgagaatctaatgctgctgctgatgtgacaggaggtggagctcggatggtaat----------------gcttactcgtcagcccgcctctcacccgctgtgcaggctggttcctaacagaccacgga-------ccacgaccggtctgctgcccagcgatcagggacccct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39893155 481 + 64411610 ctagtacagcagaacccaacctttttggcaccagggactggtttcaccaaagacagtttttccacagatgagc---agggggtatggttttggggtgattcaag-----tatatttattgtgcactttatttctattattacattgtaatatataatgaaataattacacaattcaccatcatgtagaatcaatgggaggcctgagcttgttttcctgcaactagatggtcccatctgggggtgatgggagacagtgacagatcatcgggcatgatcagtgagtgcgcaaccgaggtcccttgcatgcatgcagagctcacgatagggttcccaaccctatgagaatctaatgctgctgctgatgtgacaggaggtggagctcggatggtaat----------------gctcactcgtcagcccgcctctcacccgctgtgcaggctggttcctaacagaccacgga-------ccacgaccggtctgctgcccagcgatcagggacccct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6310757 478 - 8369475 CTAGTAcagcagaacctaacctttttggcaccagggactggtttcagcaaagacagtttttccacagatgagc---agggggtatggttttggggtgattcaagtatattatatttattgtgcact---tttctattattacattgtaatatctaatgaaataattacacaattcaccatcatgtagaatcaatgggaggcctgagcttgttttcctgcaactagatggtcccatctgggggtgatgggagacagcgacagatcatcgggcatgatcagtgagtgcgcaacctaggtccct----tgcatgcagagctcacgatagggttcccaaccctatgagaatctaatgctgctgctgatgtgacaggaggtggagctcggatggtaat----------------gctcactcgtcagcccgcctctcacccgctgtgcaggctggttcctaacagaccacgga-------ccacgaccggtctgccgcccagggatcaggga-ccct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63903626 475 - 106955855 CTAGTACAACAGAAcctaacctttttggcaccagtgactggtttcaccaaagacagtttttccacagacgagc---agggggtatggttttggggtgattcaag-----taca-ttattgtgcactttatttatattattacattgtaatacatagtgaaataattatacaattcaccatcatgtagaatcaatgggaggcctgagcttgttttcctgcaactagatggtcccatttgggggtgatgggagacagtgacagatcatcgggcatgatcagtgagtacgcagcctagatccct----cggatgcacagttcacgatagggttcccaatcctatgagaatctaatgcagctgctgatgtgacaggaggtggagctcggacggtaat----------------gctcact-gtcagccagcctctcacccactgtgcgggctggttcctaacagatcgcgga-------ccacgaccggtctgccgcccagggatcagggacccct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30214783 485 + 53671032 ctagtacagcagagcccaacatttttggcaccag-gactgttttcaccaaagacagtttttccacagacgagtgggaggggggatggttttggggtgattcaagtacataatatttattgtgcactttgtttctattattacattgtaatacataatgaaataattatacaattcaccatcatgtagaatcagtggga-gcctgagcttgttttcctgtaactagatggtcccatctgggggtgatgggagccagtgacagatcatcaggcatgatcagtgagtgcgcaacctagatccct----cacatgcacagttcacgatagggatcccaatcc--tgagaatctaatgctgctgctgatgtgacaggaggtggagctcagatggcaatgctc------------gctcgctcgtcagcccgcctctcacccgctgtgcgggctggttcctaacaggccacgga-------ccacaaccggtttgccacccagggatcagggccccct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34668516 485 + 59248254 ctagtacagcagagcccaacatttttggcaccag-gactgttttcaccaaagacagtttttccacaggcgagtgggaggggggatggttttggggtgattcaagtacataatatttattgtgcactttgtttctattattacattgtaatacataatgaaataattatacaattcaccatcatgtagaatcagtggga-gcctgagcttgttttcctgtaactagatggtcccatctgggggtgatgggagccagtgacagatcatcaggcatgatcagtgagtgcgcaacctagatccct----cacatgcacagttcacgatagggatcccaatcc--tgagaatctaatgctgctgctgatgtgacaggaggtggagctcagatggcaatgctc------------gctcgctcgtcagcccgcctctcacccgctgtgcgggctggttcctaacaggccacgga-------ccacaaccggtctgccacccagggatcagggccccct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4535342 485 - 13342542 ctagtacagcagagcccaacatttttggcaccag-gactgttttcaccaaagacagtttttccacagacgagtgggaggggggatggttttggggtgattcaagtacataatatttattgtgcactttgtttctattattacattgtaatacataatgaaataattatacaattcaccatcatgtagaatcagtggga-gcctgagcttgttttcctgtaactagatggtcccatctgggggtgatgggagccagtgacagatcatcaggcatgatcagtgagtgcgcaacctagatccct----cacatgcacagttcacgatagggatcccaatcc--tgagaatctaatgctgctgctgatgtgacaggaggtggagctcagatggcaatgctc------------gctcgctcgtcagcccgcctctcacccgctgtgcgggctggttcctaacaggccacgga-------ccacaaccggtctgccacccggggatcagggccccct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5465268 484 + 7714307 ctagtacagcagagtccaacatttttggcaccag-gactgttttcaccaaagacagtttttccacagacgagtgggaggggggatggttttggggtgattcaagtacataatatttattgtgcactttgtttctattattacattgtaatacataataaaataattatacaattcaccatcacgtagaatcagtggga-gcctgagcttgttttcctgtaactagatggtcccatctgggggtgatgggagccagtgacagat-atcaggcatgatcagtgagtgcgcaacctagatccct----cacatgcacagttcacgacagggatcccaatcc--tgagaatctaatgctgctgctgatgtgacaggaggtggagctcagacggcaatgctc------------gcttgctcgacagcctgcctctcacccgctgtgcgggctggttcctaacaggccacgga-------ccacaaccagtctgccacccagggatcagggccccct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29271387 491 + 50890351 CTAGTAcagcagagcccaacatttttggcaccag-gactggtttcaccaaagacagtttttccacagatgagtgggagggggg-tggttttggggtgattcaagtacattatatttattgtgcactttgtttctattattacattgtaatacataatgaaataattatacaattcaccatcatgtagaatcagtggga-gcctgagcttgttttcctgtaactagatggtcccatctgggggtgatgggagacagtgacagatcatcaggcatgatcagtgagtgcgcaacctagatccct----cgcatgcacagttcatgatagggatcccaatcctatgagaatctaatgctgctgctgatgtgacaggaggtggagctcggaaggtaatgctcgctcgctcgtttgctcgctcgtcagcccgcctctcacccgctgtgcgggctggttcctaacaggccacg--------------accggtctgccacccagggatcagggccccct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 896376 489 - 2385121 ctagtacagcagagcccaacatttttggcaccag-gactgttttcaccaaagacagtttttccacagacgagtgggaggggggatggttttggggtgattcaagtacataatatttattgtgcactttgtttctattattacattgtaatacataatgaaataattacacaattcaccatcacgtagaatcagtggga-gcctgagcttgttttcctgtaactagatggtcccatctgggggtgatgggagccagtgacagatcatcaggcatgatcagtgagtgcgcaacctagatccct----cacatgcacagttcacgatagggatcccaatcc--tgagaatctaatgctgctgctgatgtgacaggaggtggagctcagacggcaatgctcgctc--------gctcgctcgtcagcccgcctctcacccgctgtgcgggctggttcctaacaggccacgga-------ccacaacccgtctgccacccagggatcagggccccct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2337002 494 + 4274983 ctagtacagcagagcccaacatttttggcaccag-gactggtttcaccaaagacagtttttccacagatgagtgggaagggggatggttttggggtgattcaagtacgttatatttattgtgcactttatttctattattacattgtaatacataatgaaataattatacaattcaccatcatgtagaatcagtggga-gcctgagcttgttttcctgcaactagatggtcccatctgggggtgatgggagacagtgacagatcatcaggcatgatcagtgagtgcgcaacctagatccct----tgcgtgcacagttcacaatagggatcccaattctatgagaatctaatgctgctgctgatgtgacaggaggtggagctcagacagtaatgctc------------gctcgctcgtcagcccgcctctcacccgctgtgcgggctggttcctaacaggccagggaccacgacccacgaccggtctgccacccagggatcagagccccct i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 583192 611 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e dasNov3.JH563638 343376 0 + 643850 C e otoGar3.GL873654 5485947 1554 + 5549422 I e mm10.chr7 111097602 574 - 145441459 I e canFam3.chr1 4618086 0 - 122678785 C e aotNan1.NW_018505377v1 368926 999 - 4471408 I e cebCap1.NW_016107633v1 1618488 1096 - 2680843 I e saiBol1.JH378197 5414125 1310 + 8899380 I e calJac3.chr22 28567796 971 + 49145316 I a score=-850.000000 s hg38.chr19_GL383574v1_alt 78873 1 + 155864 T s panTro5.chr19 36147442 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39893636 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311235 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904101 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215268 1 + 53671032 g i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669001 1 + 59248254 g i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4535827 1 - 13342542 g i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5465752 1 + 7714307 g i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29271878 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 896865 1 - 2385121 g i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2337496 1 + 4274983 g i colAng1.NW_012111697v1 C 0 C 0 s dasNov3.JH563638 343376 1 + 643850 t i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 583192 611 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e otoGar3.GL873654 5485947 1554 + 5549422 I e mm10.chr7 111097602 574 - 145441459 I e canFam3.chr1 4618086 0 - 122678785 C e aotNan1.NW_018505377v1 368926 999 - 4471408 I e cebCap1.NW_016107633v1 1618488 1096 - 2680843 I e saiBol1.JH378197 5414125 1310 + 8899380 I e calJac3.chr22 28567796 971 + 49145316 I a score=14092.000000 s hg38.chr19_GL383574v1_alt 78874 2 + 155864 CT s panTro5.chr19 36147443 2 + 61309027 CT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39893637 2 + 64411610 ct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311236 2 - 8369475 CT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904102 2 - 106955855 CT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215269 2 + 53671032 ct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669002 2 + 59248254 ct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4535828 2 - 13342542 tt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5465753 2 + 7714307 ct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29271879 2 + 50890351 CT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 896866 2 - 2385121 ct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2337497 2 + 4274983 ct i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5487501 2 + 5549422 CC i otoGar3.GL873654 I 1554 C 0 s dasNov3.JH563638 343377 2 + 643850 ct i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 583192 611 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e mm10.chr7 111097602 574 - 145441459 I e canFam3.chr1 4618086 0 - 122678785 C e aotNan1.NW_018505377v1 368926 999 - 4471408 I e cebCap1.NW_016107633v1 1618488 1096 - 2680843 I e saiBol1.JH378197 5414125 1310 + 8899380 I e calJac3.chr22 28567796 971 + 49145316 I a score=38409.000000 s hg38.chr19_GL383574v1_alt 78876 6 + 155864 CTAGTA s panTro5.chr19 36147445 6 + 61309027 CTAGTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39893639 6 + 64411610 ctagta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311238 6 - 8369475 CTAGTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904104 6 - 106955855 CTGGTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215271 6 + 53671032 ccagta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669004 6 + 59248254 ccagta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4535830 6 - 13342542 ccagta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5465755 6 + 7714307 ccagta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29271881 6 + 50890351 CCAGTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 896868 6 - 2385121 ccagta i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2337499 6 + 4274983 ccagta i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5487503 6 + 5549422 CTAGTA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4618086 3 - 122678785 ---ATA i canFam3.chr1 C 0 I 4 s dasNov3.JH563638 343379 6 + 643850 ggaata i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 583192 611 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e mm10.chr7 111097602 574 - 145441459 I e aotNan1.NW_018505377v1 368926 999 - 4471408 I e cebCap1.NW_016107633v1 1618488 1096 - 2680843 I e saiBol1.JH378197 5414125 1310 + 8899380 I e calJac3.chr22 28567796 971 + 49145316 I a score=49579.000000 s hg38.chr19_GL383574v1_alt 78882 5 + 155864 GGTCC s panTro5.chr19 36147451 5 + 61309027 GGTCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39893645 5 + 64411610 ggtcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311244 5 - 8369475 GGTCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904110 5 - 106955855 GGTCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215277 5 + 53671032 ggtcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669010 5 + 59248254 ggtcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4535836 5 - 13342542 ggtcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5465761 5 + 7714307 ggtcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29271887 5 + 50890351 GGTCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 896874 5 - 2385121 ggtcc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2337505 5 + 4274983 ggtcc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28568767 5 + 49145316 GGTCT i calJac3.chr22 I 971 C 0 s saiBol1.JH378197 5415435 5 + 8899380 gGTCT i saiBol1.JH378197 I 1310 C 0 s aotNan1.NW_018505377v1 369925 5 - 4471408 GGTCT i aotNan1.NW_018505377v1 I 999 C 0 s otoGar3.GL873654 5487509 5 + 5549422 GGGCC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4618093 4 - 122678785 AGTC- i canFam3.chr1 I 4 C 0 s dasNov3.JH563638 343385 5 + 643850 gagcc i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 583192 611 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e mm10.chr7 111097602 574 - 145441459 I e cebCap1.NW_016107633v1 1618488 1096 - 2680843 I a score=2674445.000000 s hg38.chr19_GL383574v1_alt 78887 231 + 155864 TAGGAATCT----TACTG-ATCCCACAGGTAG---TTGTGATTAGCTAGGTTTGGGAAGATGACTGTACAACACCA------------AAGCTGG---------------TTCCTGCTTTGGGGGTGTTGATATATTTTCCACAGTAGGATTATCTTAG-CATTTTTCCCATCCTTCCAAACCCAGTATATCCAGATTGTGACTGGGGCATGAAGAGA---GGGATGGGACTAAGTGGAAAGGAGGGAACAGTTTTGCAGGATGGAATCA s panTro5.chr19 36147456 231 + 61309027 TAGGAATCT----TACTG-ATCCCACAGGTAG---TTGTGATTAGCTAGGTTTGGGAAGATGACTGTACAACACCA------------AAGCTGG---------------TTCCTGCTTTGGGGGTGTTGATATATTTTCCACAGTAGGATTATCTTAG-CATTTTTCCCATCCTTCCAAACCCAGTATATCCAGATTGTGACTGGGGCATGAAGAGA---GGGATGGGACTAAGTGGAAAGGAGGGAACAGTTTTGCAGGATGGAATCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39893650 231 + 64411610 taggaatct----tactg-atcccacaggtag---ttgtgattagctaggtttgggaaGATGACTGTACAACACCA------------AAGCTGG---------------TTCCTGCTTTGGGGGTGTTGATATATTTTCCACAGTAGGATTATCTTAG-CATTTTTCCCATCCTTCCAAACCCAGTATATCCAGATTGTGACTGGGGCATGAAGAGA---GGGATGGGACTAAGTGGAAAGGAGGGAACAGTTTTGCAGGATGGAATCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311249 230 - 8369475 TAGGAATCT----TACTG-ATCCCACAGGTAG---TTGTGATTAGCTAGGTTTGGGAAGATGACTGTACAACACCA------------AAGCTGG---------------TTCCTGCTTTGGGGGTGTTGATATATTTTCCACAGTAGGATTATCTTAG-CATTTTTCCCATCCTTCC-AACCCAGTATATCCAGATTGTGACTGGGGCATGAAGAGA---GGGATGGGACTAAGTGGAAAGGAGGGAACAGTTTTGCAGGATGGAATCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904115 230 - 106955855 TAGGAATCT----TATTG-ATCCCACAGGTCG---TTGTGATTAGTTAGGTTTGGGAAGATGGCTGTACAACACCA------------AAGCTGG---------------CTCCTGCTTTGGGGGTGTTGATACATTTTCCACAGTAGGATTATCTTAG-CATTTTTCCCATCCTTCCAAACCCTGTATATCCAGATTGTGACTGAGGCATGAAGAGA---GGGACGGGACTAAGTGGAAAGGAGGGAACAGTTTTGCAGGATGGAATC- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215282 231 + 53671032 tgggaatct----tattg-gtcccacaggtag---ttgtgattagctaggtttggaaaGATGGCTGTACAACACCA------------AAGCTGG---------------CTCCTGCTTTGGGGGTGTTGGTACATTTTCCACAGTAGGATTATCTTAG-CATTTTTCCCATCTTTCCAAACCCAGTATATCCAGATTGTGACTGGGGCATGAAGAGA---GGGACGGGACTAAGTGTAAAGGAGGGAACAGTTTTGCAGGATGGAATCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669015 231 + 59248254 tgggaatct----tattg-gtcccacaggtag---ttgtgattagctaggtttgggCAGATGGCTGTACAACACCA------------AAGCTGG---------------CTCCTGCTTTGGGGGTGTTGGTACATTTTCCACAGTAGGATTATCTTAG-CATTTTTCCCATCTTTCCAAACCCAGTATATCCAGATTGTGACTGGGGCATGAAGAGA---GGGACGGGACTAAGTGTAAAGGAGGGAACAGTTTTGCAGGATGGAATCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4535841 231 - 13342542 tgggaatct----tattg-gtcccacaggtag---ttgtgattagctaggtttgggaaGATGGCTGTACAACACCA------------AAGCTGG---------------CTCCTGCTTTGGGGGTGTTGGTACATTTTCCACAGTAGGATTATCTTAG-CATTTTTCCCATCTTTCCAAACCCAGTATATCCAGATTGTGACTGGGGCATGAAGAGA---GGGACGGGACTAAGTGTAAAGGAGGGAACAGTTTTGCAGGATGGAATCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5465766 230 + 7714307 tgggaatct----tattg-gtcccacaggtag---ttgtgattagctaggtttgggaaGATGGCTGTACAACACCA------------AAGCTGG---------------CTCCTGCTTTGGGGGTGTTGGTACATTTTCCACAGTAGGATTATCTTAG-CATTTTTCCCATATTTCCAAACCCAGTATATCCAGATTGTGACTGGGGCATGAAGAGA---GGGACGGGACTAAGTGTAAAGGAGGGAACAGTTTTGCAGGATGGAATC- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29271892 231 + 50890351 TAGGAATCT----TATTG-GTCCCACAGGTAG---TTGTGATTAGCTAGGTTTGGGAAGATGGCTGTACAACACCA------------AAGCTGG---------------CTCCTGCTTTGGGGGTGTTGGTACATTTTCCACAGTAGGATTATCTTAG-CATTTTTCCCATCTTTCCAAACCCAGTGTATCCAGATTGTGACTGGGGCATGAAGAGA---GGGACGGGACTAAGTGTAAAGGAGGGAACAGTTTTGCAGGATGGAATCG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 896879 231 - 2385121 tgggaatct----tattg-gtcccacaggtag---ttgtgattagctaggtttgggaaGATGGCTGTACAACACCA------------AAGCTGG---------------CTCCTGCTTTGGGGGTGTTGGTACATTTTCCACAGTAGGATTATCTTAG-CATTTTTCCCATATTTCCAAACCCAGTATATCCAGATTGTGACTGGGGCATGAAGAGA---GGGACGGGACTAAGTGTAAAGGAGGGAACAGTTTTGCAGGATGGAATCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2337510 231 + 4274983 taggaatct----tattg-gtcccacaggtag---ttgtgatgatctaggtttgggaaGACGGCTGTACAACACCA------------AAGCTGG---------------CTCCTGCTTTGGGGGTGTTGGTACATTTTCCACAGTAGGATTATCTTAG-CATTTTTCCCATCTTTCCAAACCCAGTATATCCAGATTGTGACTGGGGCATGAAGAGA---GGGACGGGACTAAGTGTAAAGGAGGGAACAGTTTTGCAGGATGGAATCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28568772 230 + 49145316 TAAGAATCC----TATTG-GTCCCACAGGTAG---TTGTGATTAGCTAGGTTTGGGAAGATGGCTATATAACACCA------------AAGCTAG---------------CTCCTGCTTTGGGGGCATTAGTACATTTTCCACAGTAGAGTTATCTGGG-CATTTTCCCCATCCTTTCAACCCCAGTACATCCAGATTGTGACTGGGGAATGAAGAGA----GGACGGGACTTAGTGGAAGGGAGGGAACATTTTTGCAGGATGGAATCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5415440 230 + 8899380 TAGGAATCT----TACTG-GTACCACAGGTAG---TTGTGATTAGGTAGGTTTGGGAAAATGGCTATACAACACCA------------AAGCTAG---------------CTCCTGCTTTGGGGACATTAGTACATTTTCCACAGTAGAGTTATCTGGG-CATTTCCCCCATCCTTTCAAACCCAGTATATCCAGATTGTGACTGGGGAATGAAGAGA----GGATGGGACTTAGTGGAAGGGAGGGAACATTTTTGCAGGGTGGAATCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1619584 230 - 2680843 TAGGAATCT----TACTG-ATCCCACAGATAG---TTGTGATTAGCTAGGTTTGGGAAGATGACTATACAACACCA------------AAGCTAG---------------CTCCTGCTTTGGGGGCATTAGTACATTTTTCACAGTAGAGTTATCTGGG-CATTTTCCCCATCCTTTCAAACCCAGTATATCCAGATTGTGACTGGGGAATGAAGAGA----GGACGGGACTTAGTGGAAAGGAGGGAACATTTTTGCAGGGTGGAATCG i cebCap1.NW_016107633v1 I 1096 C 0 s aotNan1.NW_018505377v1 369930 218 - 4471408 TAGGAATTT----TACTG-GTCCCAAAGGTAG---TTGTGATTAGCTAGGTTTGGGAAGATGGCTATACAACACCA------------AAGCTAG---------------CTCCTGCTTTGGGGGCATTAGTACATTTTCCACAGCAGAGTTATCTGGG-CA------------TTTCAAACCCAGTATATCCAGACTGTGACTGGGGAATGAAGAGA----GGATGGGACTTAGTGGAAGGGAAGGAACATTTTTGCAGGGTGGAATCA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5487514 235 + 5549422 TACATATCT----------GTCTATATTGCAG---TTCTGATCAGTCAGGTTTGGAAAAAGAGTTATACAACAC---------------AGCTGGCTTCTCTCATCCAGCCTCCTGCTTTGAGGTCCTTGGTAAAGTTTCCTTAGTAGTATGAGGTTAACCGTTTTCCTCATCTTTCCAAATCTAGTCTCTCCAGGTTGTGAGTAGGGCATGAAGAGA---TGGAAGGGCCTAAGTAGACA----GGGACATCTTTGCAGGACAGGACCT i otoGar3.GL873654 C 0 I 2 s canFam3.chr1 4618097 244 - 122678785 TGGGAACCA----GTCTGCGTCCCACAGGTAGTTCTTCTGATCAGC-AGGTTTAGAAAAACAGCTTTAAATCAGCA------------TAGCCAACCCACCTCATGTAGCCTCCTCCTTAAAGGGCCTTTGTAAAGTTTTCACAGTAGGATCACTTTAC-CA-TTTCCCCATCTTTCCAAATCCAGTACAAGCACATTGTGACTGGGGCAGGAAGAGC---GGGAAAGGACTAAG---GAAGGAGAGG-CGTTTCTACAGGACAGTATCC i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 343390 238 + 643850 tggaaatctgttttataa-gtcccatgggtag---ttctgactagccagatttgggaaGA--GTTATAAGACATCAACTAGCTCATCTAATCCAG---------------CCCCTTGTTTGAAGGACTAAG-----TTTCCACAGGAGGATTAGCTTGT-CA--TTTCCCATCCTTCCATGTCTTCTATATGCAGGTTGTTACTGGGGCATGAAGGAAGAAGGGAAAGGACTAAGTGCAAGG---GGAGCATTTCTGCAAGACAGAATTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 583192 611 + 2501019 I e micMur3.chr22 3965360 1895 - 30143674 I e mm10.chr7 111097602 574 - 145441459 I a score=888261.000000 s hg38.chr19_GL383574v1_alt 79118 60 + 155864 --GGGGAAATGGGGAGGTTGAGACTCGAGTTTCCTCCAGAGTTTGGGTGCTTTGAGTACTGA s panTro5.chr19 36147687 60 + 61309027 --GGGGAAATGGGGAGGTTGAGACTCGAGTTTCCTCCAGAGTTTGGGTGCTTTGAGTACTGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39893881 60 + 64411610 --GGGGAAATGGGGAGGTTGAGACTCGAGTTTCCTCCAGAGTTTGGGTGCTTTGAGTACTGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311479 60 - 8369475 --GGGGAAATGGGGAGGTTGAGACTCGAGTTTCCTCCAGAGTTTGGGTGCTTTGAGTACTGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904345 59 - 106955855 ---GGGAAATCAAGAGGTTGAGACTCAAGTTTCCTCCAGAGTTTGGGTGCTTTGAGTACTGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215513 60 + 53671032 --GGGGAAATGGGGAGGTTGAGACTCGCGTTTCCTCCAGAGTTTGGGTGCTTTGAGTACTGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669246 60 + 59248254 --GGGGAAATGGGGAGGTTGAGACTCGCGTTTCCTCCAGAGTTTGGGTGCTTTGAGTACTGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536072 60 - 13342542 --GGGGAAATGGGGAGGTTGAGACTCGCGTTTCCTCCAGAGTTTGGGTGCTTTGAGTACTGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5465996 59 + 7714307 ---GGGAAATGGGGAGGTTGAGACTCGTGTTTCCTCCAGAGTTTGGGTGCTTTGAGTACTGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272123 60 + 50890351 --GGGGAAATGGGGAGGTTGAGATTCGCGTTTCCTCCAGAGTTTGAGTGCTTTGAGTACTGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897110 60 - 2385121 --GGGGAAATGGGGAGGTTGAGACTCGCGTTTCCTCCAGAGTTTGGGTGCTTTGAGTACTGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2337741 60 + 4274983 --GGGGAAATGGGGAGGTTGAGACTCGCGTTTCCTCCAGAGTTTGGGTGCTTTGAGTACTGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569002 60 + 49145316 --GGGGAAATGGAGAGGTTGAGACTCGAGTTTCCTCCAGAGTTTGGGTGCTTTGCGTACTGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5415670 47 + 8899380 --GGGGAAATGGAGAGGTTGAGACCGGAGTTTCCTCCAGAGTTTGG-------------TGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1619814 59 - 2680843 --GGGGAAATGGAGAGGATGAGACTCAAGTTTCCTCCAGAGTTGGG-TGCTTTGCGTACTGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370148 60 - 4471408 --GGGGAAATGGAGAGGTTGAGACTCGAGTTTCCTCCAGAGTTCGGGTGCTTTGTGTACTGA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3967255 60 - 30143674 --GGGGAAACGGGGAGGTTGAAACTCAGGTTTTCTCCAGAGTTTGGCTGTTGTGAGTACTGA i micMur3.chr22 I 1895 I 397 s proCoq1.NW_012149263v1 583803 60 + 2501019 --GGGGAAACGGGGAGGTCGAGACTCAGGTTTTCTCCAGAGTTTGGCTGTTTTGAGTACTGA i proCoq1.NW_012149263v1 I 611 C 0 s otoGar3.GL873654 5487751 60 + 5549422 --GGGGAAATGGGGACGGTGGGACTCAAGTTTTCTCCAAAGTTCGGCTGGTTTGAGTACTGA i otoGar3.GL873654 I 2 C 0 s canFam3.chr1 4618344 59 - 122678785 --GGGAAAACAGGGAGACAGAGACTCAGATTTCCTAT-GGGTTTGGCTGATTTGAGCACTGA i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 343628 53 + 643850 GGGAGGAAA---------TGAGGCTCAAGTTCGCTTCAGGGTTTGGCTACTTTGACTACTGA i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111097602 574 - 145441459 I a score=19000.000000 s hg38.chr19_GL383574v1_alt 79178 1 + 155864 G s panTro5.chr19 36147747 1 + 61309027 G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39893941 1 + 64411610 G i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311539 1 - 8369475 G i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904404 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215573 1 + 53671032 G i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669306 1 + 59248254 G i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536132 1 - 13342542 G i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466055 1 + 7714307 G i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272183 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897170 1 - 2385121 G i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2337801 1 + 4274983 G i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569062 1 + 49145316 G i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5415717 1 + 8899380 G i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1619873 1 - 2680843 G i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370208 1 - 4471408 G i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 583863 1 + 2501019 G i proCoq1.NW_012149263v1 C 0 I 229 s otoGar3.GL873654 5487811 1 + 5549422 G i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4618403 1 - 122678785 G i canFam3.chr1 C 0 I 8 s dasNov3.JH563638 343681 1 + 643850 G i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3967315 397 - 30143674 I e mm10.chr7 111097602 574 - 145441459 I a score=900966.000000 s hg38.chr19_GL383574v1_alt 79179 93 + 155864 T-----------------------------------TTTATTT--CGTT----------------TTTATTC----CTGGCATA--------GGG----TTTGTG---TTCCTTCTG--TCTCTTAATTTTGCATGCCAGTTGTCCCTGCCTCTGTGGGTTCTCTGC s panTro5.chr19 36147748 93 + 61309027 T-----------------------------------TTTATTT--CGTT----------------TTTATTC----CTGGTATA--------GGG----TTTGTG---TTCCTTCTG--TCTCTTAATTTTGCATGCCAGTTGTCCCTGCCTCTGTGGGTTCTCTGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39893942 93 + 64411610 T-----------------------------------TTTATTT--CGTT----------------TTTATTC----CTGGTATA--------GGG----TTTGTG---TTCCTTCTG--TCTCTTAATTTTGCATGCCAGTTGTCCCTGCCTCTGTGGGTTCTCTGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311540 93 - 8369475 T-----------------------------------TTTATTT--CGTT----------------TTTATTC----ATGGCATA--------GGG----TTTGTG---TTCCTTCTG--TCTCTTAATTTTGCATGCCAGTTGTCCCTGCCTCTGTGGGTTCTCTGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904405 93 - 106955855 T-----------------------------------TTTATTT--AGTT----------------TTTATTC----CTGGCATA--------GGG----TTTGTG---TTCCTTCTA--TCTCTTAATTTTACATGCCAGTTGTCCCTGCCTCTGTGGGTTCTCTGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215574 137 + 53671032 Ttttatttatttatttattttatttattta------tttattt--attt-atttatttatttatttatATTC----CTGGCATA--------GGG----TTTGTG---TTCTTTCTG--TCTCTTAATTTTACATGCCAGTTGTCCCTGCCTCTGTGGGTTCTCTGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669307 136 + 59248254 Ttttatttatttattta-tttatttattta------tttattt--attt-atttatttatttatttatATTC----CTGGCATA--------GGG----TTTGTG---TTCTTTCTG--TCTCTTAATTTTACATGCCAGTTGTCCCTGCCTCTGTGGGTTCTCTGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536133 128 - 13342542 T--------TTGTttta-tttatttattta------tttattt--attt-atttatttatttatttatATTC----CTGGCATA--------GGG----TTTGTG---TTCTTTCTG--TCTCTTAATTTTACATGCCAGTTGTCCCTGCCTCTGTGGGTTCTCTGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466056 116 + 7714307 T---------------------tttattta------tttattt--attt-atttatttatttatttatATAC----CTGGCATA--------GGG----TTTGTG---TTCTTTCTG--TCTCTTAATTTTACATGCCAGTTGTCCCTGCCTCTGTGGGTTCTCTGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272184 113 + 50890351 ----------------------tttatttat----ttttattt--attt-atttatttatgtatttTTATTC----CTGGCATA--------GGG----TTTGTG-------TTCTG--TTTCTTAATTTTACATGCCAGTTGTCCCTGCCTCTGTGGGTTCTCTGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897171 117 - 2385121 T---------------------tttattta------tttattt--atttaatttatttatttatttatATTC----CTGGCATA--------GGG----TTTGTG---TTCTTTCTG--TCTCTTAATTTTACATGCCAGTTGTCCCTGCCTCTGTGGGTTCTCTGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2337802 108 + 4274983 T-----------------------------------tttatgt--attt-atttatttatttatttTTATTC----CTGGCATA--------GGG----TTTGTG---TTCTTTCTG--TCTCTTAATTTTACATGCCAGTTGTCCCTGCCTCTGTGGGTTCTCTGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569063 93 + 49145316 T-----------------------------------GTTACTT--TGTT----------------TTTATTC----CTGGCATA--------GGG----TTTGTG---TTCCTTCTG--CGTCTTAATTTTACATGGCAGTTGTCCCTGCCTCTGTGGGTTCTTTGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5415718 93 + 8899380 T-----------------------------------CTTACTT--AGTT----------------TTTATTC----CTGGCATA--------GGG----TTTGTG---TTCCTTCTG--TGTCTTAATTTTACATGGCAGTTGTCCCTGCCTCTGTGAGTTCTTTGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1619874 94 - 2680843 T-----------------------------------CTTACTT-AAGTT----------------TTTCTTC----CTGGCATA--------GGG----TTTGTG---TTCCTTCTG--TGTCTTAATTTTGCATGGCAGTTGTCCCTGCCTCTGTGGGTTCTTTGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370209 93 - 4471408 T-----------------------------------CTTACTT--AGTT----------------TTTATTC----CTGGCATA--------GGG----TTTGTG---TTCCTTCTG--TGTCTTAATTTTACATGGCAGTTGTCCCTGCCTCTGTGGGTTCTTTGC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5487812 100 + 5549422 -------------------------ACTTAGAGGAGTTGAATTCAAGTT----------------TTTGTTC----TGAGCATT--------GAGGAAATGGGTG---TT---------TCTCTTAATTTTACAGGGCTAGTGT--CTGTCTCTGTGAGTTCTCTGC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4618412 97 - 122678785 -----------------------------------TTTTATTT-----T----------------TTTATTCCATACAGGAAAA--------GGG----TGTGTGGTGTTGTTTCTG--TGTCTCAGTTTTACATGGCCGCTGTCCCTGTCTCTGTGGGTTATCTGT i canFam3.chr1 I 8 C 0 s dasNov3.JH563638 343682 98 + 643850 ---------------------------------------ATTT--GTTT---------------TTTTACTC----ATAGCATACAGGAAATGGT----TGTATG---TTGTTACTGCATCACTTGATTTTATGTAACTTTTGTCCCTG--TCTATGGATTATCCGC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 583864 229 + 2501019 I e micMur3.chr22 3967315 397 - 30143674 I e mm10.chr7 111097602 574 - 145441459 I a score=1003023.000000 s hg38.chr19_GL383574v1_alt 79272 97 + 155864 CCATCAGAGAAGCC-GCTCCTTCTGCAGGG-CCCCTCTGTCCACAGCAT-----GGC--TGAGAAGCAACTTCT---TTTCCTGAGAAGGGTTACTTAGGCC------------------ATCCAAT s panTro5.chr19 36147841 97 + 61309027 CCATCAGAGAAGCC-GCTCCTTCTGCAGGG-CCCCACTGTCCACAGCAT-----GGC--TGAGAAGCAACTTCT---TTTCCTGAGAAGGGTTACTTAGGCC------------------ATCCAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894035 97 + 64411610 CCATCAGAGAAGCC-GCTCCTTCTGCAGGG-CCCCACTGTCCACAGCAT-----GGC--TGAGAAGCAACTTCT---TTTCCTGAGAAGGGTTACTTAGGCC------------------ATCCAAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311633 98 - 8369475 CCATCAGAGAAGCT-GCTCCTTCTGCAGGGCCCCCTCTGTCCACAGCAT-----GGC--TGAGAAGCAACTTCT---TTTCCTGAGAAGGGTTACTTAGGCC------------------ATCCAAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904498 98 - 106955855 CCATCAGAGAAGCC-GCTCCTTCTGCAGGG-CCCCTCTGT-CACAGCAT-----GGCTATGAGAAGCAACTTCT---TTTCCTGAGAAGGGTTACTTAGGCC------------------ATCTGAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215711 98 + 53671032 CCATCAGAGAAGCC-GCTCTTTCTGCAGGG-CCCGTCTGTTCACAGCAT----AGGC--TGAGAAGCAACTTCT---TTTCCTAAGAAGGGCTACTTAGGCC------------------ATCTAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669443 98 + 59248254 CCATCAGAGAAGCC-GCTCTTTCTGCAGGG-CCCGTCTGTTCACAGCAT----AGGC--TGAGAAGCAACTTCT---TTTCCTAAGAAGGGCTACTTAGGCC------------------ATCTAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536261 98 - 13342542 CCATCAGAGAAGCC-GCTCTTTCTGCAGGG-CCCGTCTGTTCACAGCAT----AGGC--TGAGAAGCAACTTCT---TTTCCTAAGAAGGGCTACTTAGGCC------------------ATCTAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466172 98 + 7714307 CCATCAGAGAAGCC-GCTCTTTCTGCAGGG-CCCGTCTGTTCACAGCAT----AGGC--TGAGAAGCAACTTCT---TTTCCTAAGAAGGGCTACTTAGGCC------------------ATCTAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272297 99 + 50890351 CCATCAGAGAAGCCTGCTCCTTCTGCAGGG-CCCCTCTGTTCACAGCAT----AGGC--TGAGAAGCAACTTCT---TTTCCTAAGAAGGGTTACTTAGGCC------------------ATCTAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897288 98 - 2385121 CCATCAGAGAAGCC-GCACTTTCTGCAGGG-CCCGTCTGTTCACAGCAT----AGGC--TGAGAAGCAACTTCT---TTTCCTAAGAAGGGCTACTTAGGCC------------------ATCTAAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2337910 98 + 4274983 CCATCAGAGAAGCC-GCTCCTTCTGCAGGG-CCCCTCTGTTCACAGCAT----AGGC--TGAGAAGCAACTTCT---TTTCCTAAGAAGGGTGACTTAGGCC------------------ATCTAAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569156 93 + 49145316 CAGTCAGAGAAGCC-GCTCCTTCTGCAGGG-CCCCTCTGTTCACAGCAT----AGGC--TGAGAAGCCACTTCT--------TGAGAAGTGTTACTTAGGTG------------------ATCCAAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5415811 84 + 8899380 ----CAGAGAAGCC-GCTC---CTGCAGGG-CCCCTCTGTTCACAGCAT----AGGC--TGAGAAGCAACTTCT--------TGTGAGG-GTTACTTAGGTG------------------AT-CAAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1619968 93 - 2680843 CAGTCAGAGAAGCC-GCTCCTTCTGCAGGG-CCCCTCTGTTCACAGCAT----AGGC--TGAGAAGCAACTTCT--------TGAGAAGGGTAACTTAGGTG------------------ATCCAAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370302 93 - 4471408 CAGTCAGAGAAGCT-GCTCCTTCTGCAGGG-CCCCTCTGTTCACAGCAT----AGGC--TGAGAAGCAACTTCT--------TGAGAAGGGTTACTTAGGTG------------------ATCCAAT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5487912 118 + 5549422 CTGTCAGAATAGCT-GCTCCTGCAG-AGGG-GACCTGTGTTGACAGCAT----AGGC--AGAGAAGCAACCCCTGCTCTTCCTGAGAAGGGTTATATAGTTTCTACAGTTCACTTTTCAGATCTAAT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111098176 86 - 145441459 CTACCAGAAAAGCT-GCTT------CAGAG-----------CACTGCATTTGGAGAG--TGAGAAGCAACTTCT---TTTTCTAAGAGGCATATTTTAAGCT------------------CTTTAAT i mm10.chr7 I 574 I 7 s canFam3.chr1 4618509 55 - 122678785 CTGAAAGAGAAGCT-GCGCCTTCTGCACAG-C--------------TGT----AGGT--TAA-----------T------------------CACTCGGGTC---------------------TAAT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 343780 115 + 643850 TAGTCAGAAAAACT-GCTGCTTCTGTATGG-CCCCTGTGTT----ACAT----AGGC--TGAGAAGTAATTTCTGTTTTTCCTGAGAAAGGTTTTTTAGGCTCTATAATAGACTTTCTAGATCTAAT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 583864 229 + 2501019 I e micMur3.chr22 3967315 397 - 30143674 I a score=227710.000000 s hg38.chr19_GL383574v1_alt 79369 16 + 155864 CACATCTGGATTCAGT s panTro5.chr19 36147938 16 + 61309027 CACATCTGGATTCAGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894132 16 + 64411610 CACATCTGGATTCAGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311731 16 - 8369475 CACATCTGGATTCAGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904596 16 - 106955855 CACATCTGGATTCAGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215809 16 + 53671032 CACATCTGGATTCGGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669541 16 + 59248254 CACATCTGGATTCGGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536359 16 - 13342542 CACATCTGGATTCGGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466270 16 + 7714307 CACATCTGGATTCGGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272396 16 + 50890351 CACGTCTGGATTTGGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897386 16 - 2385121 CACATCTGGATTCGGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338008 16 + 4274983 CACATCTGGATTCGGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569249 16 + 49145316 TATGTCTGGATTCAGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5415895 16 + 8899380 GACGTCTGGATTCAGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620061 16 - 2680843 TACGTCTGGATTCAGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370395 16 - 4471408 TACATCTGGATTCAGT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3967712 16 - 30143674 CACGTCTGGATTCGGT i micMur3.chr22 I 397 C 0 s otoGar3.GL873654 5488030 16 + 5549422 CGTGTCTGAATTCAGC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111098269 16 - 145441459 CATGTCTGCATTGAGC i mm10.chr7 I 7 C 0 s canFam3.chr1 4618564 16 - 122678785 CACACCCAGATTCAGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 343895 16 + 643850 CTTGTCTGGGTTTGCA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 583864 229 + 2501019 I a score=365243.000000 s hg38.chr19_GL383574v1_alt 79385 23 + 155864 GTGTTGCAGGATCCCCCTGCCCT-- s panTro5.chr19 36147954 23 + 61309027 GTGTTGCAGGATCCCCCTGCCCT-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894148 23 + 64411610 GTGTTGCAGGATCCCCCTGCCCT-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311747 23 - 8369475 GTGTTGCAGGATCCCCCTGCCCT-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904612 23 - 106955855 GTGTTGCAGGATCCCCCTGCCCT-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215825 23 + 53671032 GTGTTGCAGGACCCCCCTGCCCT-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669557 23 + 59248254 GTGTTGCAGGACCCCCCTGCCCT-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536375 23 - 13342542 GTGTTGCAGGACCCCCCTGCCCT-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466286 23 + 7714307 GTGTTGCAGGACCCCCCTGCCCT-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272412 23 + 50890351 GTGTTGCAGGACCCCCCTGCCCT-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897402 23 - 2385121 GTGTTGCAGGACCCCCCTGCCCT-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338024 23 + 4274983 GTGCTGCAGGACCCCCCTGCCCT-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569265 23 + 49145316 GTGTTGCAGGATCCCCTTGCCCT-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5415911 23 + 8899380 GTGTTGCAGGATCCCCCTGCCCT-- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620077 23 - 2680843 GTGTTGCAGGATCCCCCTGCCCT-- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370411 23 - 4471408 GTGTTGCAGGATCCTCCTGCCCT-- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3967728 23 - 30143674 GTGTTGCAGGATCCCCCTGCCCT-- i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 584093 23 + 2501019 GTGTTACAGGATCCCCCTGCCCT-- i proCoq1.NW_012149263v1 I 229 C 0 s otoGar3.GL873654 5488046 23 + 5549422 ATGTTACAGGATCCTCTTGCCtt-- i otoGar3.GL873654 C 0 I 262 s mm10.chr7 111098285 18 - 145441459 --GTTATGGG--TGCCTGGCCC--- i mm10.chr7 C 0 C 0 s canFam3.chr1 4618580 21 - 122678785 --GTGATGGGTTGCCTCTGCCCT-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 343911 25 + 643850 GTATTAAAGGACTCCCTCTTCCCCC i dasNov3.JH563638 C 0 C 0 a score=35266.000000 s hg38.chr19_GL383574v1_alt 79408 3 + 155864 GTT s panTro5.chr19 36147977 3 + 61309027 GTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894171 3 + 64411610 GTT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63904635 3 - 106955855 GTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215848 3 + 53671032 GTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669580 3 + 59248254 GTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536398 3 - 13342542 GTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466309 3 + 7714307 GTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272435 3 + 50890351 GTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897425 3 - 2385121 GTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338047 3 + 4274983 GTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569288 3 + 49145316 GTT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1620100 3 - 2680843 GTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370434 3 - 4471408 GTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3967751 3 - 30143674 GTT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 584116 3 + 2501019 GTT i proCoq1.NW_012149263v1 C 0 I 56 s otoGar3.GL873654 5488331 3 + 5549422 GTT i otoGar3.GL873654 I 262 C 0 s mm10.chr7 111098303 2 - 145441459 AT- i mm10.chr7 C 0 C 0 s canFam3.chr1 4618601 3 - 122678785 GTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 343936 3 + 643850 ATT i dasNov3.JH563638 C 0 C 0 e saiBol1.JH378197 5415934 0 + 8899380 C e gorGor5.CYUI01015150v1 6311770 0 - 8369475 C a score=738637.000000 s hg38.chr19_GL383574v1_alt 79411 65 + 155864 AGTTCAGAGA-TT--AAGCTGTTTTACATAGTAAAGGTGGGGAGAG-TGTCATG----GTATAAAGTAATCCA s panTro5.chr19 36147980 65 + 61309027 AGTTCAGAGA-TT--AAGCTGTTTTACATAGTAAAGGTGGGGAGAG-TGTCATG----GTATAAAGTAATCCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894174 65 + 64411610 AGTTCAGAGA-TT--AAGCTGTTTTACATAGTAAAGGTGGGGAGAG-TGTCATG----GTATAAAGTAATCCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311770 64 - 8369475 -GTTCAGAGA-TT--AAGCTGTTTTACATAGTAAAGGTGGGGAGAG-TGTCATG----GTATAAAGTAATCGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904638 66 - 106955855 AGTTCAGAGATTT--AAGCTGTTTTACATAGTAAAGGTGGGGAGAG-TGTCATG----GTATAAAGTAATCGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215851 65 + 53671032 AGTTCAGAGA-TG--AAGCTGTTTTACATAGTAAAGGTGGGGAGAG-TGTCATG----GTATAAAGTAATTGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669583 65 + 59248254 AGTTCAGAGA-TG--AAGCTGTTTTACATAGTAAAGGTGGGGAGAG-TGTCATG----GTATAAAGTAATTGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536401 65 - 13342542 AGTTCAGAGA-TG--AAGCTGTTTTACATAGTAAAGGTGGGGAGAG-TGTCATG----GTATAAAGTAATTGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466312 65 + 7714307 AGTTCAGAGA-TG--AAGCTGTTTTACATAGTAAAGGTGGGGAGAG-TGTCATG----GTATAAAGTAATCGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272438 64 + 50890351 AGTTCAGAGA-TG--AGGCTGTTTTACATAGTAAAGGTGGGGAGAG--GTCATG----GTATAAAGTAATCGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897428 65 - 2385121 AGTTCAGAGA-TG--AAGCTGTTTTACATAGTAAAGGTGGGGAGAG-TGTCATG----GTATAAAGTAATCGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338050 65 + 4274983 AGTTCAGAGA-TG--AAGCTGTTTTACGTAGTAAAAGTGGGGAGAG-TGTCATG----GTATAAAGTAATCAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569291 63 + 49145316 AGTTCAGAGA-TT--AAGCTGTTTTACATAGTGAAGGTGGG--GAG-TGTTATA----GTATAAGTTAATCAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5415934 64 + 8899380 -GTTCATAGA-TT--AAGCTGTTTTACACAGTGAAGGTGGGGAGAG-TGTTATG----GTATAAGTTAATCAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620103 65 - 2680843 AGTTCAGAGA-TC--AAGCTGTTTTACATAGTGAAGGTGGGGAGAG-TGTTATG----GTATAAGTTAATCAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370437 65 - 4471408 AGTTCAGAGA-TT--AAGCTGTTTTACATAGTGAAGGTGGGGAGAG-TGTTATG----GTATAAGTTAATCAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3967754 61 - 30143674 ----GAGAAA-TT--AAGTTGGTTGAAATCGTGAGGTTGGAGAACG-TATCATG----GTATAATATAATCAG i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5488334 65 + 5549422 AATTGAGAAA-TT--AAGTTGTTTTA---TGTGGAGGTGAAGAGAG-TAT-ATGGCCAGTACAAGATAATTGA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111098305 56 - 145441459 -ACTCAGTAT-TTAAAAGTTTGCTAACATTG----------GAGTG-TGTCATG----GTATGTGGTAATAAA i mm10.chr7 C 0 C 0 s canFam3.chr1 4618604 58 - 122678785 GGTTCAGAGC-TG-------GTTTAA---ACTGACTGTGAGGAGAGAGGTCACA----GGATAAAGTAATCGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 343939 46 + 643850 AGCT--GAGA-CT--AAGCTTGCTTATTC------------------TATCAAG----GTATAAGGTGacaca i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 584119 56 + 2501019 I a score=23100.000000 s hg38.chr19_GL383574v1_alt 79476 1 + 155864 G s panTro5.chr19 36148045 1 + 61309027 G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894239 1 + 64411610 G i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311834 1 - 8369475 G i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904704 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215916 1 + 53671032 G i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669648 1 + 59248254 G i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536466 1 - 13342542 G i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466377 1 + 7714307 G i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272502 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897493 1 - 2385121 G i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338115 1 + 4274983 G i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569354 1 + 49145316 G i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5415998 1 + 8899380 G i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620168 1 - 2680843 G i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370502 1 - 4471408 G i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3967815 1 - 30143674 G i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 584175 1 + 2501019 G i proCoq1.NW_012149263v1 I 56 C 0 s otoGar3.GL873654 5488399 1 + 5549422 G i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111098361 1 - 145441459 G i mm10.chr7 C 0 C 0 s canFam3.chr1 4618662 1 - 122678785 G i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 343985 1 + 643850 g i dasNov3.JH563638 C 0 I 848 a score=143997.000000 s hg38.chr19_GL383574v1_alt 79477 9 + 155864 GTGAATGGT s panTro5.chr19 36148046 9 + 61309027 GTGAATGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894240 9 + 64411610 GTGAATGGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311835 9 - 8369475 GTGAATGGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904705 9 - 106955855 GTGAATGGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215917 9 + 53671032 GTGAATGGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669649 9 + 59248254 GTGAATGGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536467 9 - 13342542 GTGAATGGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466378 9 + 7714307 GTGAATGGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272503 9 + 50890351 GTGAATGGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897494 9 - 2385121 GTGAATGGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338116 9 + 4274983 GTGAATGGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569355 9 + 49145316 GTGAATGAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5415999 9 + 8899380 GTGAATGAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620169 9 - 2680843 GTGAATGAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370503 9 - 4471408 GTGAATGAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3967816 9 - 30143674 GTGAATGGT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 584176 9 + 2501019 GTGAATGGT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5488400 9 + 5549422 CTGAATGGT i otoGar3.GL873654 C 0 T 340 s mm10.chr7 111098362 9 - 145441459 GTGAGGGAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4618663 9 - 122678785 GTAAGTGAG i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 343986 848 + 643850 I a score=150675.000000 s hg38.chr19_GL383574v1_alt 79486 12 + 155864 CTCTTCCTGTAG s panTro5.chr19 36148055 12 + 61309027 CTCTTCCTGTAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894249 12 + 64411610 CTCTTCCTGTAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311844 12 - 8369475 CTCTTCCTGTAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904714 11 - 106955855 CTCTT-CTGTAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215926 12 + 53671032 CGCTTCCTGTGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669658 12 + 59248254 CGCTTCCTGTGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536476 12 - 13342542 CGCTTCCTGTGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466387 12 + 7714307 CGCTTCCTGTGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272512 12 + 50890351 CGCTTCCTGTAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897503 12 - 2385121 CGCTTCCTGTGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338125 12 + 4274983 CGCTTCCTGTAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569364 12 + 49145316 CTCTTCCTGTGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416008 12 + 8899380 CTCTTCCTGTGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620178 12 - 2680843 CTCTTCCTGTGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370512 12 - 4471408 CTCTTCCTGTGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3967825 12 - 30143674 CTCTTCCTGTAG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 584185 12 + 2501019 CTCTTCCTGTAG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5488069 12 + 5549422 ctttttttgtag i otoGar3.GL873654 T 340 I 340 s mm10.chr7 111098371 6 - 145441459 ------TTACAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4618672 9 - 122678785 ---CTCTGTTAG i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 343986 848 + 643850 I a score=337576.000000 s hg38.chr19_GL383574v1_alt 79498 25 + 155864 GAGTGCAGGTGTCAC----CAATTTGCTT s panTro5.chr19 36148067 25 + 61309027 GAGTGCAGGTGTCAC----CAATTTGCTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894261 25 + 64411610 GAGTGCAGGTGTCAC----CAGTTTGCTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311856 25 - 8369475 GAGTGCAGGTGTCAC----CAATTTGCTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904725 25 - 106955855 GAGCGCAGGTGTCAC----CAATTTGCTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215938 25 + 53671032 GAGCGCAGGTGTCAT----CAATTTGCTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669670 25 + 59248254 GAGCGCAGGTGTCAT----CAATTTGCTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536488 25 - 13342542 GAGCGCAGGTGTCAT----CAATTTGCTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466399 25 + 7714307 GAGCGCAGGTGTCAT----CAATTTGCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272524 25 + 50890351 GAGCACAGGTGTCAT----CAATTTGCTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897515 25 - 2385121 GAGCGCAGGTGTCAC----CAATTTGCTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338137 25 + 4274983 GAGCGCAGGTGTCAC----CAATTTGCTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569376 15 + 49145316 GAGCACAGACGTCAC-------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416020 25 + 8899380 GAGCACAGATGTCAC----CAATTTGCTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620190 25 - 2680843 GAGCACAGATGTCAC----CAATTTGCTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370524 25 - 4471408 GAGCACAAATGTCAC----CAATTTGCTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3967837 25 - 30143674 GAGTCCAGATGTCAC----CCATTTGCTT i micMur3.chr22 C 0 I 77 s proCoq1.NW_012149263v1 584197 25 + 2501019 GAGCCCAGATGTCAC----CCGTTTGCTT i proCoq1.NW_012149263v1 C 0 I 86 s otoGar3.GL873654 5488421 24 + 5549422 GACCCCAGATGTCAC----CAATTTGCT- i otoGar3.GL873654 I 340 C 0 s mm10.chr7 111098377 25 - 145441459 GAGCCTAGGTGGCAC----TGCTTGGCTT i mm10.chr7 C 0 I 424 s canFam3.chr1 4618681 29 - 122678785 GAGCTCACATGTCACATGTCACTTTGCTA i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 343986 848 + 643850 I a score=35986.000000 s hg38.chr19_GL383574v1_alt 79523 12 + 155864 TAGTTTACCTGT s panTro5.chr19 36148092 12 + 61309027 TAGTTTACCTGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894286 12 + 64411610 TAGTTTACCTGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311881 12 - 8369475 TAGTTTACCTGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904750 12 - 106955855 TAGTTTACCTGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215963 5 + 53671032 TAGTT------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669695 5 + 59248254 TAGTT------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536513 5 - 13342542 TAGTT------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466424 5 + 7714307 TAGTT------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272549 5 + 50890351 TAGTT------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897540 5 - 2385121 TAGTT------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338162 5 + 4274983 TAGTT------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569391 9 + 49145316 ---GTCACCTGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416045 12 + 8899380 TAGTTTACCTGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620215 12 - 2680843 TAGTTTTCCTGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370549 12 - 4471408 TAGTTTACCTGT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5488445 12 + 5549422 TAGTTTACCTAT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4618710 12 - 122678785 TTTTTTGACTGT i canFam3.chr1 C 0 I 16 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e micMur3.chr22 3967862 77 - 30143674 I e dasNov3.JH563638 343986 848 + 643850 I e mm10.chr7 111098402 424 - 145441459 I a score=173334.000000 s hg38.chr19_GL383574v1_alt 79535 25 + 155864 CCCGACTGGTTTTGGGG--------tttttttg s panTro5.chr19 36148104 25 + 61309027 CCCGACTGGTTTTGGGG--------tttttttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894298 25 + 64411610 CCCGACTGGTTTTGGGG--------tttttttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311893 26 - 8369475 CCCGACTGGTTTTGGGG-------ttttttttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904762 26 - 106955855 CCCGACTGGTTTTGGGG-------Gtttttttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215968 23 + 53671032 ---GACTGGTTTGGGGG-------GATTTTTTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669700 23 + 59248254 ---GACTGGTTTGGGGG-------GATTTTTTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536518 23 - 13342542 ---GACTGGTTTGGGGG-------GATTTTTTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466429 23 + 7714307 ---GACTAGTTTGGGGG-------GATTTTTTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272554 23 + 50890351 ---GACTGGTTTGGGGG-------GATTTTTTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897545 23 - 2385121 ---GACTGGTTTGGGGG-------GATTTTTTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338167 23 + 4274983 ---GACTGGTTTGGGGG-------GATTTTTTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569400 26 + 49145316 TCCAACTGGTTTTGGGG-------Gtttttttg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416057 26 + 8899380 TCCAACTGGTTTTGGGG-------GGttttttg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620227 25 - 2680843 TCCAACTGATTCTGGGC-------G-ttttttg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370561 33 - 4471408 TCCAACTGGTTTTGGGGtttgtttgtttttttg i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5488457 18 + 5549422 TATAACTGGGTTTTCAA-------A-------- i otoGar3.GL873654 C 0 T 394 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e micMur3.chr22 3967862 77 - 30143674 I e dasNov3.JH563638 343986 848 + 643850 I e mm10.chr7 111098402 424 - 145441459 I e canFam3.chr1 4618722 16 - 122678785 I a score=2386473.000000 s hg38.chr19_GL383574v1_alt 79560 270 + 155864 agacggagtctcactctatcacccaagctggagtgcagtggcgcgatcttagctcactgcaacctctgcctcccaggttcaagtgattctctcc-cctcagccccccgagtagctgggattgcaggcgt-gtg-cccccacacccagctaatttttgtatttttagtagagatgggatttcaccatgttggccaggctggtctc--gaactcctcacctcaggtgatccacctgcctcggcctcctgaagtgctgggattgcaggt------gtga-gccac s panTro5.chr19 36148129 270 + 61309027 agatggagtctcactctatcacccaagctggagtgcagtggcacgatcttagctcactgcaacctctgcctcccaggttcaagtgattctctcc-cctcagccccccgagtagctgggattacaggcat-gtg-cccccacacccaactaatttttgtacttttagtagagatgggatttcaccatgttggccaggctggtctc--gaactcctcacctcaggtgatccacctgcctcggcctcctgaagtgctgggattgcaggt------gtga-gccac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894323 270 + 64411610 agatggagtctcactctatcacccaagctggagtgcagtggcacgatcttagctcactgcaacctctgcctcccaggttcaagtgattctctcc-cctcagccccccgagtagctgggattacaggcat-gtg-cccccacacccaactaatttttgtatttttagtagagatgggatttcaccatgttggccaggctggtctc--gaactcctcacctcaggtgatccacctgcctcggcctcctgaagtgctgggattgcaggt------gtga-gccac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6311919 270 - 8369475 agacggagtctcactctatcatccaagctggagtgcagtggcgcgatcttagctcactgcaacctctgcctcccagattcaagtgattctctcc-cctcagccccccaagtagctgggattacaggcgt-gtg-cccccacacccagctaatttttgtatttttagtagagatgggatttcaccatgttggccaggctggtctc--gaactcctcacctcaggtgatccacctgcctcggcctcctgacgtgctgggattgcaggt------gtga-gccac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63904788 270 - 106955855 agacacagtctcactctatcacccattctggagtgcagtggcccgatcttagctcactgcaacctctgcctcccaggttcaagtgattctctcc-cctcagccccccgagtagctgggattacaggcgt-gtg-cccccacacccagctaatttttgtatttttagtagagatgggatttcaccatgttggccaggctggtctc--gaactcctcacctcaggtgatccacctgcctcggcctcctgaagtgctgggattacaggt------gtga-gccac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30215991 252 + 53671032 AGAtg-------------tcacccaggctggagtgcagtggtgcgatc-tggctcactgcaacctctgcctcccaggttgaagtgatact-----------ccccccaagcagctgggattacaggcgtggtgccccccacacccagctaatttttgtatttttagtagagatgggatttcaccatgttggccaggctggccctcggaactcctcacctcaagtgatccatctgcctcagcctcctgaagtgctgggattacaggt-----ggtgaggccac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34669723 246 + 59248254 AGAtg-------------tcacccaggctggagtgcagtggtgcgatc-tggctcactgcaacctctgcctcccaggttgaagtgatact-----------ccccccaagcagctgggattacaggcgt-gtg-cccccacacccagctaatttttgtatttttagtagagatgggatttcaccatgttggccaggctggtctc--aaactcctcacctcaagtgatccatctgcctcagcctcctgaagtgctgggattacaggt------gtga-gccac i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536541 246 - 13342542 AGAtg-------------tcacccaggctggagtgcagtggtgcgatc-tggctcactgcaacctctgcctcccaggttgaagtgatact-----------ccccccaagcagctgggattacaggcgt-gtg-cccccacacccagctaatttttgtatttttagtagagatgggatttcaccatgttggccaggctggtctc--gaactcctcacctcaagtgatccatctgcctcagcctcctgaagtgctgggattacaggt------gtga-gccac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466452 246 + 7714307 AGAtg-------------tcacccaggctggagtgcagtggtgcgatc-tggctcactgcaacctctgcctcccaggttgaagtgatact-----------ccccccaagcagctgggattacaggcgt-gtg-cccccacacccagctaatttttgtatttttagtagagatgggatttcaccatgttggccaggctggtctt--gaactcctcacctcaagtgatccatctgcctcagcctcctgaagtgctgggattacaggt------gtga-gccac i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272577 246 + 50890351 AGAtg-------------tcacccaggctggagtgcagtggtgcgatc-tggctcactgcaacctctgcctcccaggttgaagtgatact-----------ccccccaagcagctgggattacaggcgt-gtg-ccctcacacccagctaatttttgtatttttagtagagatgggatttcaccatgttggccagcctggtctc--gaactcctcacctcaagtgatccatctgcctcagcctcctgaagtgctgggattacaggt------gtga-gccac i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897568 246 - 2385121 AGAtg-------------tcacccaggctggagtgcagtggtgcgatc-tggctcactgcaacctctgcctcccaggttgaagtgatact-----------ccccccaagcagctgggattacaggcgt-gtg-cccccacacccagctaatttttgtatttttagtagagatgggatttcaccatgttggccaggctgatctc--gaactcctcacctcaagtgatccatctgcctcagcctcctgaagtgctgggattacaggt------gtga-gccac i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338190 246 + 4274983 AGAtg-------------tcacccaggctggagtgcagtggtgcgatc-tggctcactgcaacctctgcctcccaggttgaagtgataat-----------ccccgcaagcagctgggattacaggcat-gtg-cccccacacccagctaatttttgtatttttagtagagatgggacttcaccatgttggccaggctggtctc--gaactcctcacctcaagtaatccatctgcctcagcctcctgaagtgctgggattacaggt------gtga-gccat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569426 263 + 49145316 agacag--tctcgctctgtcaaccaggctggagtacagtgttgcgatcttggctcactgcaacctctgcctcccaggttcaagtgattctcccctcctcagcctcccaaatagctgggattacagccat-gtg-c-----cacccagctaatttttgtacgtttagtagagac-agatttcaccctgttggccaggctggtctc--aaactcctcacctcaggtgatccactcacttcggcctcctgaagtgctgagattacaggt------gtca-gccac i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416083 265 + 8899380 agacagaatctcgctctgtcacccaggctggagtacagtgttgcgatcttggctcactgcaacctctgcctcccaagttcaagtgattctcccctcctgagcctcccaaatagctgggattacagccat-gta-c-----cacccagctaatttttgtatttttagtagagac-agatttcaccctcttggccaggctggtctc--aaactcctcacctcaggtgatccatgcacctcggcctcctgaagtgttgagattacaggt------gtca-gccac i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620252 265 - 2680843 agacagagtctcgctctgtcacccaggctggagtacagtgtagcgatcttggctcactggaacctctgcctccgaggttcaagtgattctcccctcctcagcctcccaaataactgggattacagccat-gta-c-----cacccagctaatttttgtatttttagtagagac-ggatttcaccctgttggccaggctggtctc--aaactcctcaccacaggtgatccacccacctcagcctcctgaagcgctgagattacaggt------gtca-gccac i cebCap1.NW_016107633v1 C 0 I 36 s aotNan1.NW_018505377v1 370594 263 - 4471408 agactg--tctcgctctgtcacccaggctggagtacggtgttgcgatcttggctcactgcaacctctgcctcccaggttcaagtgattctcccctcctcagcctcccaaatagctgggattacagccat-gta-c-----cacccagctaatttttgtatttttagtagagac-ggatttcaccctgttggccaggctggtctc--aaactcctcacctcaggtgatccacccaccttggcctcctgaagtgctgagattacaggt------gtca-gccac i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5488081 228 + 5549422 agacagagtcttagtttatcgccctcagtagagtgctgtggtgtcaca-ctgctcacagcaacctccaactcctgggcttagatgattctcctg-cctcagcctcctgagcagctgggactacaggtgc-cta-ccacaacacccagccatttttt-----tgttgcag-----------------tttggctaggccaggttt--gaacccacca-------------------------ctctcgatatatggggctggcaacctatccactga-gccac i otoGar3.GL873654 T 394 C 0 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e micMur3.chr22 3967862 77 - 30143674 I e dasNov3.JH563638 343986 848 + 643850 I e mm10.chr7 111098402 424 - 145441459 I e canFam3.chr1 4618722 16 - 122678785 I a score=107436.000000 s hg38.chr19_GL383574v1_alt 79830 15 + 155864 tg-tgcctggccTGTT s panTro5.chr19 36148399 15 + 61309027 tg-tgcctggccTGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894593 15 + 64411610 tg-tgcctggccTGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312189 15 - 8369475 tg-tgcctggccTGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63905058 15 - 106955855 tg-tgcttggccTGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30216243 16 + 53671032 tgccgcctggccTGTT i rheMac8.chr19 C 0 I 29 s macFas5.chr19 34669969 15 + 59248254 tg-cgcctggccTGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536787 15 - 13342542 tg-cgcctggccTGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466698 15 + 7714307 tg-cgcctggccTGTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272823 15 + 50890351 tg-cgcctggccTGTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897814 15 - 2385121 tg-cgcctggccTGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338436 15 + 4274983 tg-ctcctggccTATT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569689 15 + 49145316 ca-cAAATGGCCTGTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416348 15 + 8899380 ta-cacatggccTGTT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 370857 15 - 4471408 ca-cacatggccTGTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5488309 14 + 5549422 -a-agcgccacccCCT i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e micMur3.chr22 3967862 77 - 30143674 I e dasNov3.JH563638 343986 848 + 643850 I e mm10.chr7 111098402 424 - 145441459 I e canFam3.chr1 4618722 16 - 122678785 I e cebCap1.NW_016107633v1 1620517 36 - 2680843 I a score=53063.000000 s hg38.chr19_GL383574v1_alt 79845 19 + 155864 CTGACT---CTGTTTAAAAGAT s panTro5.chr19 36148414 19 + 61309027 CTGACT---CTTTTTAAAAGAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894608 19 + 64411610 CTGACT---CTTTTTAAAAGAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312204 15 - 8369475 CTGACT---CTTTT----AGAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63905073 14 - 106955855 CTG--------TTTTAAAAGAT i nomLeu3.chr10 C 0 I 119 s macFas5.chr19 34669984 15 + 59248254 ----CT---GTTTTTAAAAGAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536802 15 - 13342542 ----CT---GTTTTTAAAAGAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466713 15 + 7714307 ----CT---GTTTTTAAAAGAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272838 15 + 50890351 ----CT---GTTTTTAAAAGAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897829 15 - 2385121 ----CT---GTTTTTAAAAGAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338451 15 + 4274983 ----CT---GTTTTTAAAAGAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569704 17 + 49145316 CTGAC-----TTTTTAAAATAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416363 15 + 8899380 CTG-------TTTTTAAAATAG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 370872 19 - 4471408 CTGACT---GTTTTTAAAATAT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5488323 18 + 5549422 ----CTTGCCTTGTTAATTGAG i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e micMur3.chr22 3967862 77 - 30143674 I e dasNov3.JH563638 343986 848 + 643850 I e mm10.chr7 111098402 424 - 145441459 I e canFam3.chr1 4618722 16 - 122678785 I e cebCap1.NW_016107633v1 1620517 36 - 2680843 I e rheMac8.chr19 30216259 29 + 53671032 I a score=28957.000000 s hg38.chr19_GL383574v1_alt 79864 6 + 155864 AACAAG s panTro5.chr19 36148433 6 + 61309027 AGCAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894627 6 + 64411610 AACAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312219 6 - 8369475 AACAAG i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34669999 6 + 59248254 AAAAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536817 6 - 13342542 AAAAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466728 6 + 7714307 AAAAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272853 6 + 50890351 AAAAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897844 6 - 2385121 AAAAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338466 6 + 4274983 AAAAAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569721 6 + 49145316 AAAAAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416378 6 + 8899380 AACAAG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 370891 6 - 4471408 AACAAG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5488341 2 + 5549422 ---AA- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e micMur3.chr22 3967862 77 - 30143674 I e dasNov3.JH563638 343986 848 + 643850 I e mm10.chr7 111098402 424 - 145441459 I e canFam3.chr1 4618722 16 - 122678785 I e cebCap1.NW_016107633v1 1620517 36 - 2680843 I e rheMac8.chr19 30216259 29 + 53671032 I e nomLeu3.chr10 63905087 119 - 106955855 I a score=7065.000000 s hg38.chr19_GL383574v1_alt 79870 6 + 155864 TATTAg s panTro5.chr19 36148439 6 + 61309027 TATTAg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894633 6 + 64411610 TATTAg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312225 6 - 8369475 TATTAg i gorGor5.CYUI01015150v1 C 0 C 0 s macNem1.NW_012011689v1 4536823 6 - 13342542 TATTAG i macNem1.NW_012011689v1 C 0 I 7 s otoGar3.GL873654 5488343 5 + 5549422 -ATTAA i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e micMur3.chr22 3967862 77 - 30143674 I e dasNov3.JH563638 343986 848 + 643850 I e mm10.chr7 111098402 424 - 145441459 I e chlSab2.chr6 29272859 0 + 50890351 C e canFam3.chr1 4618722 16 - 122678785 I e aotNan1.NW_018505377v1 370897 0 - 4471408 C e cebCap1.NW_016107633v1 1620517 36 - 2680843 I e saiBol1.JH378197 5416384 0 + 8899380 C e calJac3.chr22 28569727 0 + 49145316 C e colAng1.NW_012111697v1 2338472 0 + 4274983 C e manLeu1.NW_012102454v1 897850 0 - 2385121 C e cerAty1.NW_012005268v1 5466734 0 + 7714307 C e macFas5.chr19 34670005 0 + 59248254 C e rheMac8.chr19 30216259 29 + 53671032 I e nomLeu3.chr10 63905087 119 - 106955855 I a score=1000.000000 s hg38.chr19_GL383574v1_alt 79876 1 + 155864 g s panTro5.chr19 36148445 1 + 61309027 g i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894639 1 + 64411610 g i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312231 1 - 8369475 g i gorGor5.CYUI01015150v1 C 0 C 0 s otoGar3.GL873654 5488348 1 + 5549422 G i otoGar3.GL873654 C 0 I 299 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e micMur3.chr22 3967862 77 - 30143674 I e dasNov3.JH563638 343986 848 + 643850 I e mm10.chr7 111098402 424 - 145441459 I e chlSab2.chr6 29272859 0 + 50890351 C e canFam3.chr1 4618722 16 - 122678785 I e aotNan1.NW_018505377v1 370897 0 - 4471408 C e cebCap1.NW_016107633v1 1620517 36 - 2680843 I e saiBol1.JH378197 5416384 0 + 8899380 C e calJac3.chr22 28569727 0 + 49145316 C e colAng1.NW_012111697v1 2338472 0 + 4274983 C e manLeu1.NW_012102454v1 897850 0 - 2385121 C e cerAty1.NW_012005268v1 5466734 0 + 7714307 C e macNem1.NW_012011689v1 4536829 7 - 13342542 I e macFas5.chr19 34670005 0 + 59248254 C e rheMac8.chr19 30216259 29 + 53671032 I e nomLeu3.chr10 63905087 119 - 106955855 I a score=2422.000000 s hg38.chr19_GL383574v1_alt 79877 3 + 155864 ctg s panTro5.chr19 36148446 3 + 61309027 ctg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894640 3 + 64411610 ctg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312232 3 - 8369475 ctg i gorGor5.CYUI01015150v1 C 0 C 0 s otoGar3.GL873654 5488648 3 + 5549422 ccg i otoGar3.GL873654 I 299 C 0 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e micMur3.chr22 3967862 77 - 30143674 I e dasNov3.JH563638 343986 848 + 643850 I e mm10.chr7 111098402 424 - 145441459 I e chlSab2.chr6 29272859 0 + 50890351 C e canFam3.chr1 4618722 16 - 122678785 I e aotNan1.NW_018505377v1 370897 0 - 4471408 C e cebCap1.NW_016107633v1 1620517 36 - 2680843 I e saiBol1.JH378197 5416384 0 + 8899380 C e calJac3.chr22 28569727 0 + 49145316 C e colAng1.NW_012111697v1 2338472 0 + 4274983 C e manLeu1.NW_012102454v1 897850 0 - 2385121 C e cerAty1.NW_012005268v1 5466734 0 + 7714307 C e macNem1.NW_012011689v1 4536829 7 - 13342542 I e macFas5.chr19 34670005 0 + 59248254 C e rheMac8.chr19 30216259 29 + 53671032 I e nomLeu3.chr10 63905087 119 - 106955855 I a score=61013.000000 s hg38.chr19_GL383574v1_alt 79880 60 + 155864 ggtgcggtg--actcacgcctgtaatcccagcactttgggaggctgaggcgggtggatcacg-- s panTro5.chr19 36148449 60 + 61309027 ggtgtggtg--actcacgcctgtaatcccagcactttaggaggctgaggcgggtggatcacg-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894643 60 + 64411610 ggtgtggtg--actcacgcctgtaatcccagcactttaggaggctgaggcgggtggatcacg-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312235 60 - 8369475 ggtgcggtg--actcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcacg-- i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30216288 61 + 53671032 ggcgcggtggcgctcaagcctgtaatcccagcactttggggagc-gagacgggtggatcacg-- i rheMac8.chr19 I 29 C 0 s otoGar3.GL873654 5488651 60 + 5549422 ggcgtgatg--gctcacgcctgtaat-ccagcactctgggagacccaggcaga-ggatcacctg i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e micMur3.chr22 3967862 77 - 30143674 I e dasNov3.JH563638 343986 848 + 643850 I e mm10.chr7 111098402 424 - 145441459 I e chlSab2.chr6 29272859 0 + 50890351 C e canFam3.chr1 4618722 16 - 122678785 I e aotNan1.NW_018505377v1 370897 0 - 4471408 C e cebCap1.NW_016107633v1 1620517 36 - 2680843 I e saiBol1.JH378197 5416384 0 + 8899380 C e calJac3.chr22 28569727 0 + 49145316 C e colAng1.NW_012111697v1 2338472 0 + 4274983 C e manLeu1.NW_012102454v1 897850 0 - 2385121 C e cerAty1.NW_012005268v1 5466734 0 + 7714307 C e macNem1.NW_012011689v1 4536829 7 - 13342542 I e macFas5.chr19 34670005 0 + 59248254 C e nomLeu3.chr10 63905087 119 - 106955855 I a score=76409.000000 s hg38.chr19_GL383574v1_alt 79940 55 + 155864 aggtcaagagatcgagaccatcctgaccaacatggtgaaaccccgtctct--actaa s panTro5.chr19 36148509 55 + 61309027 aggtcaagagatcgagaccatcctgaccaacatggcgaaaccccatctct--actaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894703 55 + 64411610 aggtcaagagatcgagaccatcctgaccaacatggcgaaaccccatctct--actaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312295 55 - 8369475 aggtcaagagatcgagaccatcctgaccaatgtggtgaaaccccgtctct--actaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63905206 55 - 106955855 aggtcaagagatcgagaccatcctgaccaacatggtgaaacaccatctct--actaa i nomLeu3.chr10 I 119 C 0 s rheMac8.chr19 30216349 57 + 53671032 ggttcaggagatcgagaccaacccctggtacatggtgaaactccgtctctaaactaa i rheMac8.chr19 C 0 C 0 s otoGar3.GL873654 5488711 52 + 5549422 aggtcaggag-ttgagaccagcatgagcaaga--gtgagaccccatctct--actaa i otoGar3.GL873654 C 0 I 477 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e micMur3.chr22 3967862 77 - 30143674 I e dasNov3.JH563638 343986 848 + 643850 I e mm10.chr7 111098402 424 - 145441459 I e chlSab2.chr6 29272859 0 + 50890351 C e canFam3.chr1 4618722 16 - 122678785 I e aotNan1.NW_018505377v1 370897 0 - 4471408 C e cebCap1.NW_016107633v1 1620517 36 - 2680843 I e saiBol1.JH378197 5416384 0 + 8899380 C e calJac3.chr22 28569727 0 + 49145316 C e colAng1.NW_012111697v1 2338472 0 + 4274983 C e manLeu1.NW_012102454v1 897850 0 - 2385121 C e cerAty1.NW_012005268v1 5466734 0 + 7714307 C e macNem1.NW_012011689v1 4536829 7 - 13342542 I e macFas5.chr19 34670005 0 + 59248254 C a score=225353.000000 s hg38.chr19_GL383574v1_alt 79995 189 + 155864 aaatacaaaaaa-ttagcc-tggtgtggtggcgggcacctgtaa-tcccagctacttgggaggctgaggcaggagaattgc----ttgaacctgggaggcggaggttgcagtgagctgagattgtgccactgc--actccagcctgggcaaaaag-agcgaagct--ccatctcaaaaaaaaa----aaaaaaaaaaCCACGTAT s panTro5.chr19 36148564 188 + 61309027 aaatacaaaaaa-ttagcc-tggtgtggtggcaggcacctgtaa-tcccagctacttgggaggctgaggcaggagaattgc----ttgaacctgggaggcggaggttgcagtgagctgagattgtgccactgc--actccagcctgggcaaaaag-agcgaaact--ccatctc-aaaaaaaa----aaaaaaaaaaCCACATAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894758 180 + 64411610 aaatacaaaaaa-ttagcc-tggtgtggtggcaggcacctgtaa-tcccagctacttgggaggctgaggcaggagaattgc----ttgaacctgggaggcggaggttgcagtgagctgagattgtgccactgc--actccagcctgggcaaaaag-agcgaaact--ccatctc-------------aaaaaaaaaaCCACGTAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312350 193 - 8369475 aaatacaaaaaa-ttagcc-tggtgtggtggcagggacctgtaa-tcccagctacttgggaggctgaggcaggagaattgc----ttgaacctgggaggcggaggttgcagtgagctgagattgtgccactgc--actccagcctgggcaaaaag-agcgaaact--ccatctcaaaaaaaaaaaacaaaaaaaaaaacaCGTAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63905261 185 - 106955855 aaatacaaaaaatttagcc-tagcatggtggcaggcgcctgtaa-tcccagctacttgggaggctgaggcaggagaattgc----ttgaacccaggaggcggagattgcagtgagctgagattgcgccactgc--actccagcctgggcaaaaat-agcaacact--ccatctc-----aaaa----aaaaaaGATAACACGTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30216406 184 + 53671032 aaat---caaaa-ctag-c-gggcggggtggcggg--cctgtaagtcccagcta--tcgggagctgaggcagagaaatggcggtgcggaacctgggaggcggagcttgcagtgagctgagatccgggccctgcaaactccagccccggagaacagaagcgagactgccctcctcaaaaaaaaa----aaaaaaaaaaG------- i rheMac8.chr19 C 0 C 0 s otoGar3.GL873654 5489240 179 + 5549422 AAATAcaaaaag-ctagccagggggttgtagcgggcacctgtag-ccccagctactcaggaagctgaggcaggaagatccc----ttgagcctaagagtttgaggttgctgtgagctacgat---gccaacac--actgtacccagggc-aacag-agtgagact--ctgtctcaaaaaaata----aaaagaaaaaa------- i otoGar3.GL873654 I 477 C 0 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e micMur3.chr22 3967862 77 - 30143674 I e dasNov3.JH563638 343986 848 + 643850 I e mm10.chr7 111098402 424 - 145441459 I e chlSab2.chr6 29272859 0 + 50890351 C e canFam3.chr1 4618722 16 - 122678785 I e aotNan1.NW_018505377v1 370897 0 - 4471408 C e cebCap1.NW_016107633v1 1620517 36 - 2680843 I e saiBol1.JH378197 5416384 0 + 8899380 C e calJac3.chr22 28569727 0 + 49145316 C e colAng1.NW_012111697v1 2338472 0 + 4274983 C e manLeu1.NW_012102454v1 897850 0 - 2385121 C e cerAty1.NW_012005268v1 5466734 0 + 7714307 C e macNem1.NW_012011689v1 4536829 7 - 13342542 I e macFas5.chr19 34670005 0 + 59248254 C a score=10920.000000 s hg38.chr19_GL383574v1_alt 80184 1 + 155864 T s panTro5.chr19 36148752 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894938 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312543 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63905446 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30216590 1 + 53671032 T i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670005 1 + 59248254 T i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5466734 1 + 7714307 T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272859 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897850 1 - 2385121 T i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338472 1 + 4274983 T i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569727 1 + 49145316 T i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416384 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620553 1 - 2680843 T i cebCap1.NW_016107633v1 I 36 C 0 s aotNan1.NW_018505377v1 370897 1 - 4471408 T i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4618738 1 - 122678785 T i canFam3.chr1 I 16 C 0 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e micMur3.chr22 3967862 77 - 30143674 I e dasNov3.JH563638 343986 848 + 643850 I e otoGar3.GL873654 5489419 0 + 5549422 C e mm10.chr7 111098402 424 - 145441459 I e macNem1.NW_012011689v1 4536829 7 - 13342542 I a score=104799.000000 s hg38.chr19_GL383574v1_alt 80185 14 + 155864 ATTAGTAAAATT--GA s panTro5.chr19 36148753 14 + 61309027 ATTAGTAAAATT--GA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894939 14 + 64411610 ATTAGTAAAATT--GA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312544 13 - 8369475 ATTAGT-AAATT--GA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63905447 14 - 106955855 ATTAGTAAAATT--GA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30216591 12 + 53671032 ATTAGTAAAATG---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670006 12 + 59248254 ATTAGTAAAATG---- i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5466735 14 + 7714307 ATTAGTAAAATTGG-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272860 14 + 50890351 ATTAGTAAAATT--GG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897851 14 - 2385121 ATTAGTAAAATT--GG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338473 14 + 4274983 ATTAGTAAAATT--GG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569728 14 + 49145316 ATTAGCAAAATT--GG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416385 14 + 8899380 ATTAGCAAAATT--GG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620554 14 - 2680843 ATTAGCAAAATT--GG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370898 14 - 4471408 ATTAGCAAAATT--GG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5489419 12 + 5549422 ATTa--aaaatt--aa i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4618739 14 - 122678785 ATTAGTACAGTC--AG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 344834 14 + 643850 ATTAGTGCAATT--GA i dasNov3.JH563638 I 848 C 0 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e micMur3.chr22 3967862 77 - 30143674 I e mm10.chr7 111098402 424 - 145441459 I e macNem1.NW_012011689v1 4536829 7 - 13342542 I a score=229861.000000 s hg38.chr19_GL383574v1_alt 80199 22 + 155864 AATCAAACTTAGGGAAGTATCA s panTro5.chr19 36148767 22 + 61309027 AATCAAACTTAGGGAAGTATCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894953 22 + 64411610 AATCAAACTTAGGGAAGTATCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312557 22 - 8369475 AATCAAACTTAGGGAAGTATCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63905461 22 - 106955855 AATCAAACTTAGGGAAGTATCG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30216603 22 + 53671032 AATCAAATTTAGGAAAGTATCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670018 22 + 59248254 AATCAAATTTAGGAAAGTATCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536836 22 - 13342542 AATCAAATTTAGGAAAGTATCA i macNem1.NW_012011689v1 I 7 C 0 s cerAty1.NW_012005268v1 5466749 22 + 7714307 AATCAAATTTAGGAAAGTATCG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272874 22 + 50890351 AATCAAATTTAGGAAAGTATCG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897865 22 - 2385121 AATCAAATTTGGGAAAGTATCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338487 22 + 4274983 AATCAAACTTAGGAAAGTATCG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569742 22 + 49145316 AATCAAACCTAGGGAAGTATTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416399 22 + 8899380 AATCAAATTTAGGGAAGTATTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620568 22 - 2680843 AATCAAACTTAGGGAAGTATTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370912 22 - 4471408 AATCAAACTTAGGGAAGTATTG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5489431 2 + 5549422 --------------aa------ i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4618753 22 - 122678785 AAGCCAACTTAAGGAAGTAAAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 344848 22 + 643850 AGTCAAACTTAAGAAAGTCAAG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e micMur3.chr22 3967862 77 - 30143674 I e mm10.chr7 111098402 424 - 145441459 I a score=275401.000000 s hg38.chr19_GL383574v1_alt 80221 20 + 155864 TAGTACCATTAATCTGTCAA s panTro5.chr19 36148789 20 + 61309027 TAGTACCATTAATCTGTCAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894975 20 + 64411610 TAGTACCATTAATCTGTCAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312579 20 - 8369475 TAGTACCATTAATCTGTCAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63905483 20 - 106955855 TAGTACCATTAATCTGTCAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30216625 20 + 53671032 TAGTACCATTAATCTGTCAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670040 20 + 59248254 TAGTACCATTAATCTGTCCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536858 20 - 13342542 TAGTACCATTAATCTGTCAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466771 20 + 7714307 TAGTACCATTAATCTGTCAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272896 20 + 50890351 TAGTACCATTAATCTGTCAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897887 20 - 2385121 TAGTACCATTAATCTGTCAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338509 20 + 4274983 TAGTACCATTAATCTGTCAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569764 20 + 49145316 TAGTACCATTAATCTGTCAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416421 20 + 8899380 TAGTACCATTAATCTGTCAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620590 20 - 2680843 TAGTACCATTAATCTGTCAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370934 20 - 4471408 TAGTACCATTAATCTGTCAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3967939 20 - 30143674 TAGTACCATTAATCTCTGAA i micMur3.chr22 I 77 C 0 s canFam3.chr1 4618775 20 - 122678785 TAGCACCGTTGTGCTCTGAC i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 344870 20 + 643850 TAGCACCATTAATCTCTGAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 584222 86 + 2501019 I e otoGar3.GL873654 5489433 0 + 5549422 C e mm10.chr7 111098402 424 - 145441459 I a score=816121.000000 s hg38.chr19_GL383574v1_alt 80241 72 + 155864 TCTGA----AGATGCTAAAAGGAGATTTGCTT--AGCAGGCTGCCTTGGCT--TCT-CCAAGATGGGGAGAC---AGACAACTT s panTro5.chr19 36148809 72 + 61309027 TCTGA----AGATGCTAAAAGGAGATTTGCTT--AGCAGGCTGCCTTGGCT--TCT-CCAAGATGGGGAGAC---AGACAACTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39894995 72 + 64411610 TCTGA----AGATGCTAAAAGGAGATTTGCTT--AGCAGGCTGCCTTGGCT--TCT-CCAAGATGGGGAGAC---AGACAACTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312599 71 - 8369475 TCTGA----AGATGCT-AAAGGAGATTTGCTT--AGCAGGCTGCCTTGGCT--TCT-CCAAGATGGGGAGAC---AGACAACTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63905503 73 - 106955855 TCTGA----AGATGCTAAAAGGAGATTTGCTT--AGCAGGCTGCCTTGGCT--TCTCCCAAGATGGGGAGAC---AGACAACTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30216645 73 + 53671032 TCTGA----AGATGCTAAAAGGAGATTTGCTT--AGCAGGCTGCCTTGGCT--TCTCCCAAGATGGAGAGAC---GGACAACTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670060 73 + 59248254 TCTGA----AGATGCTAAAAGGAGATTTGCTT--AGCAGGCTGCCTTGGCT--TCTCCCAAGATGGAGAGAC---GGACAACTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536878 72 - 13342542 TCTGA----AGATGCTAAA---AGATTTGCTT--AGCAGGCTGCCTTGGCTTCTCTCCCAAGCTGGAGAGAC---GGACAGCTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466791 73 + 7714307 TCTGA----AGATGCTAAAAGGAGATTTGCTT--AGCAGGCTGCCTTGGCT--TCTCCCAAGATGGAGAGAC---GGACAACTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272916 70 + 50890351 TCTGA----AGATGCTAAAAGGAGATTTGCTT--AGCAGGCTGCCTTGGCT--TCTCCCAAGATGGAGAGAC---GGACAA--- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897907 73 - 2385121 TCTGA----AGATGCTAAAAGGAGATTTGCTT--AGCAGGCTGCCTTGGCT--TCTCCCAAGATGCAGAGAC---GGACAACTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338529 73 + 4274983 TCTGA----AGATGCTAAAAGGAGATTTGCTT--AGCAGGCTGCCTTGGCT--TCTCCCAAGATGGAGAGAC---GGACAACTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569784 70 + 49145316 TCTGA----AGACACTAAAAGGAGATTTGCTT--AGCAGGCTGCCTTGGCT--TCTCCCAAGATGGAGAGAC---AGAAAA--- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416441 70 + 8899380 TCTGC----AGATACTAAAAGAAGATATGCTT--AGCAGACTGCCTTAGCT--TCTGCCATGATGGAGAGAC---AGACAA--- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620610 53 - 2680843 TCTGA----AGACACTAAAAGGAGATTTGCTT--AGCAGCCT-------------------GGTGGAGAGAC---AGACAA--- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 370954 74 - 4471408 TCTGAATTCAGACACTAAAAGGAGATTTGCTT--AGCAGGCTGCCTTGGCT--TCTCCCAAGATGGAGAGAC---AGACAA--- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3967959 73 - 30143674 TCTGA----AGGTGCTAAATGAGGACTTGCTC--AGCAGGCTGCCTTGGCT--TCTCCCAAGATGGAGAAGC---AGACAGCTT i micMur3.chr22 C 0 I 126 s proCoq1.NW_012149263v1 584308 70 + 2501019 TCTGA----AGATGCTAAATGGGGACTTGCTC--AGCAGGCTGCCTTGGCT--TCTCCCAAGATGGAGAAAC---AGACGA--- i proCoq1.NW_012149263v1 I 86 C 0 s otoGar3.GL873654 5489433 30 + 5549422 ----a----aaataataaa----------------------------------------aaaataaaaagaa---aaagaa--- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4618796 72 - 122678785 TCTAA----GGATGCAAAACGAG--TTGGCTCAGAGCAGGCTGCCCTAGCT--TCTCCCAAGAAGGAGACTC---AAGGACTT- i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 344890 76 + 643850 TCTGA----GGACTCTAAATTGGAATTTGTTCAGAGCAGGCCTCCTTGGCC--TCT--AAAGGTGGAGAACCCAGGAACAGCTT i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111098402 424 - 145441459 I a score=884531.000000 s hg38.chr19_GL383574v1_alt 80313 75 + 155864 CTTGGAAGCAGTGTCCTCCAAACAGAAATTGGTCAAGGAAGGGAAGTGGGAGAG-AG---AGCTTTGACTAGCAGAGGC s panTro5.chr19 36148881 75 + 61309027 CTTGGAAGCAGTGTCCTCCAAACAGAAATTGGTCAAGGAAGGGAAGTGGGAGAG-AG---AGCTTTGACTAGCAGAGGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39895067 75 + 64411610 CTTGGAAGCAGTGTCCTCCAAACAGAAATTGGTCAAGGAAGGGAAGTGGGAGAG-AG---AGCTTTGACTAGCAGAGGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312670 71 - 8369475 CTTGGAAGCAGTGTTCTCCAAATACAAATTGGTCAAGGAAGGGAAGTGG----G-AG---AGCTTTGACTAGCAGAGGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63905576 75 - 106955855 CTTGGAAGCAGTGTCCTCCAAACAGAAATTGGTCAAGGAAGGGAAGCGGGAGAG-AG---AGCTTTGACTAGCAGAGGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30216718 75 + 53671032 CTTGGAAGCAGTGTCCTCCAAACAGAAATTGATCAAGGAAGGGAAGTGGGAAAG-AG---AGCTTTGAGCAGCAGAGGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670133 75 + 59248254 CTTGGAAGCAGTGTCCTCCAAACAGAAATTGATCAAGGAAGGGAAGTGGGAAAG-AG---AGCTTTGAGCAGCAGAGGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4536950 75 - 13342542 CTTGGAAGCAGTGTCCTCCAAACAGAAATTGATCAAGGAAGGGAAGTGGGAAAG-AG---AGCTTTGAGCAGCAGAGGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466864 75 + 7714307 CTTGAAAGCAGTGTCCTCCAAACAGAAATTGATCAAGGAAGGGAAGTGGGAAAG-AG---AACTTTGAGCAGCAGAGGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29272986 73 + 50890351 CTTGGAAGCAGTGTCCTCCAAACAGAAATTGGTCAAGGAAGGGAAGTGGGAA---AG---AGCTTTGAGCAGCAGAGGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 897980 75 - 2385121 CTTGGAAGCAGTGTCCTCCAAACAGAAATTGATCAAGGAAGGGAAGTGGGAAAG-AG---AGCTTTGAGCAGCAGAGGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338602 75 + 4274983 CTTGGAAGCAGTGTCCTCCAGACAGAAATTGGTCAAGGAAGGGAAGTAGGAGAG-AG---AGCTTTGAGCAGCAGAGGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569854 71 + 49145316 CTTGGAAGTGGTATCCTCCAAACAGAAATTGGTCAAGGAAGGGAAGTG----AG-AG---AGCTTTGAGCAGCAGAGGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416511 71 + 8899380 CTTGGAAGTGGTATCCTCCAAACAGAAATTGGTCAAGGAAGGGAAGTG----AG-AG---AGCTTTGAGCAGCAGAGGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620663 71 - 2680843 CTTGGAAGTGGTATCCTCCAAACAGAAATTGGTCAAGGAAGGAAAGTG----AG-AG---AGCTTTAAGCAGCAGAGGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 371028 71 - 4471408 CTTGGAAGTGGTATCCTGCAAACAGAAATTGGTCAAGGAAGGGAAGTG----AG-AG---AGCTTTGAGCAGCAAAGGC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 584378 75 + 2501019 CTTAGAAGAGGTGTCCTCTGAGTAGAAATTGGTCAAGGAGGGGGAGTGAGGGAG-AA---AGTTCTGAGCAGCAGAGGC i proCoq1.NW_012149263v1 C 0 I 73 s otoGar3.GL873654 5489463 54 + 5549422 ---------ggaaCC----------AAATTGGTCAGGGAAGAGGAGTGAGGGAT-AA---GA--CTGTGCTCCAGGAGC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4618868 76 - 122678785 CTCGGAAGAGGGATTCCCTGACTAGGAGTTGGTCAAGTGAGGGGAGCAAGGGAGTGG---AGCTTTGAGCACCCGGGGC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 344966 74 + 643850 CTTGGAAG-AGTTTCCT--GAATAGGGTTTG-TCAAATGAGGGAAGCAAGAGAA-AGTGCAGCTTCCAGCAGCAAAGGC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3968032 126 - 30143674 I e mm10.chr7 111098402 424 - 145441459 I a score=640621.000000 s hg38.chr19_GL383574v1_alt 80388 58 + 155864 TTGGAagccagc--cagccag-cagccaACAGTG--CATGTGTGCATTGGGAAGCTAGTGGTC s panTro5.chr19 36148956 58 + 61309027 TTGGAagccagc--cagccag-cagccaACAGTG--CATGTGTGCATTGGGAAGCTAGTGGTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39895142 58 + 64411610 TTGGAagccagc--cagccag-cagccaACAGTG--CATGTGTGCATTGGGAAGCTAGTGGTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312741 56 - 8369475 TTGGAagccagc--cagccag-cagccaACAATG--CATGTGTGCATTGG--AGCTAGTGGTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63905651 58 - 106955855 TTGGAagccagc--cagccag-cagccaACAGCA--CATGTGTGCATTGGGAAGCTAGTGGTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30216793 58 + 53671032 TTGGAagccagc--cagccag-cagccaACAGCG--CATGCGTGCATTGGGAAGCTAGTGGTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670208 58 + 59248254 TTGGAagccagc--cagccag-cagccaACAGCG--CATGCGTGCATTGGGAAGCTAGTGGTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537025 58 - 13342542 TTGGAagccagc--cagccag-cagccaACAGCG--CATGCGTGCATTGGGAAGCTAGTGGTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466939 58 + 7714307 TTGGAagccagc--cagccag-cagccaACAGCG--CATGCGTGCATTGGGAAGCTAGTGGTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273059 58 + 50890351 TTGGAagccagc--cagccag-cagccaACAGCG--CATGTGTGCATTGGGAAGCTAGTGGTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898055 58 - 2385121 TTGGAagccagc--cagccag-cagccaACAGCG--CATGCGTGCATTGGGAAGCTAGTGGTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338677 54 + 4274983 TTGG----CAGC--CAGCCAG-CAGCCAACAGTG--CATGTGTGCATTGGGAAGCTAGTGGTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569925 60 + 49145316 TTAGAAGCCAGC--CAGCCAG-CAGCCAACTGCGCACATGTGTGCATTGGGAAGCTAGTGGTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416582 60 + 8899380 TTAGAAGCCAGC--CAGCCAG-CAGCCAACTGCACACACGTGTGCATTGGGAAGCTAGTGGTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620734 60 - 2680843 TTAGAagccagc--cagccag-cagccaACTGTGCACATGCATGCATTGGGAAGCTAGTGGTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 371099 60 - 4471408 TTAGAagccagc--cagccag-cagccaACTGCATACATGTGTGCATTGGGAAGCTAGCGGTC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5489517 55 + 5549422 TTGGAGGGCAGCTGCAGCCAGCCAGCCACTAGTA--AGTGC------TGGGAAGCTGAGGTAC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4618944 57 - 122678785 -TTCAGGCCAGGGGCAACCAGGCAGCCAGCT-----AGTGTGTGCACTGGGAAGCTAGAGGTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 345040 52 + 643850 ATGGAGGCTGAC-------AG-TAGCCAACCAA---CTAGTGTGTCCTGGGAAGCTAGAGGTG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 584453 73 + 2501019 I e micMur3.chr22 3968032 126 - 30143674 I e mm10.chr7 111098402 424 - 145441459 I a score=71697.000000 s hg38.chr19_GL383574v1_alt 80446 5 + 155864 CAGGG s panTro5.chr19 36149014 5 + 61309027 CAGGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39895200 5 + 64411610 CAGGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312797 5 - 8369475 CAGGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63905709 5 - 106955855 CAGGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30216851 5 + 53671032 CAGGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670266 5 + 59248254 CAGGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537083 5 - 13342542 CAGGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5466997 5 + 7714307 CAGGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273117 5 + 50890351 CAGGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898113 5 - 2385121 CAGGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338731 5 + 4274983 CAGGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569985 5 + 49145316 CAGGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416642 5 + 8899380 CAGGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620794 5 - 2680843 CAGGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 371159 5 - 4471408 CAGGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3968158 5 - 30143674 CAGGG i micMur3.chr22 I 126 C 0 s otoGar3.GL873654 5489572 3 + 5549422 --CAG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4619001 5 - 122678785 CAGGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 345092 5 + 643850 CAAGT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 584453 73 + 2501019 I e mm10.chr7 111098402 424 - 145441459 I a score=221604.000000 s hg38.chr19_GL383574v1_alt 80451 18 + 155864 ACCAGGCACTGCTCCTGT s panTro5.chr19 36149019 18 + 61309027 ACCAGGCACTGCTCCTGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39895205 18 + 64411610 ACCAGGCACTGCTCCTGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312802 18 - 8369475 ACCAGGCACTGCTCCTGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63905714 18 - 106955855 ACCAGGCACTGCTCCTGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30216856 18 + 53671032 ACCAGGCATTGCCCCTGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670271 18 + 59248254 ACCAGGCATTGCCCCTGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537088 18 - 13342542 ACCAGGCATTGCCCCTGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467002 18 + 7714307 ACCAGGCATTGCCCCTGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273122 18 + 50890351 ACCAGGCACTGCCCCTGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898118 18 - 2385121 ACCAGACATTGCCCCTGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338736 18 + 4274983 ACCAGGCACTGCCCCTGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28569990 18 + 49145316 CCCGGACACTGCTCCCGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416647 18 + 8899380 CCCGGGCACTGCTCCCGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1620799 18 - 2680843 CCCAGGCACTGCTCCCTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 371164 18 - 4471408 CCTGGGCACTGCTCCCAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3968163 18 - 30143674 CCCAGGCACTGCTCCTGG i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5489575 18 + 5549422 CCCAGGCACTGAGCCTGT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111098826 17 - 145441459 ACCAGGCAA-GCTCCTGT i mm10.chr7 I 424 C 0 s canFam3.chr1 4619006 17 - 122678785 CCCAGGCAGTGGTCTTG- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 345097 15 + 643850 CCCAGGCACTGATGT--- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 584453 73 + 2501019 I a score=3768895.000000 s hg38.chr19_GL383574v1_alt 80469 258 + 155864 GGGATCCATCCCAGCCCTCT---AAGGAGCGGT---GC--AAAGGTTCTT-ATCCTA--TTTATCGGAGCCAGTGTCCAGAAAAGGAAGCTTGTGG-TTT-GAGACATTCTGTAAATCCGGTTCCAAGAGCACGAGGTAGGACTCT---GAATCCGATG----TGGTTTCTGTTCTCGGT----GATGGTGCAGAGCTGTGAGCCAGTGGTA--GGGTGTCCTTTAAATTCCAGC-TCAGTACACTAGTTAATGAACTTGGCTGACTGA-TAAAAATGTTTTCAGG s panTro5.chr19 36149037 258 + 61309027 GGGATCCATCCCAGCCCTCT---AAGGAGCGGT---GC--AAAGGTTCTT-ATCCTA--TTTATCGGAGCCAGTGTCCAGAAAAGGAAGCTTGTGG-TTT-GAGACATTCTGTAAATCTGGTTCCAAGAGTACGAGGTAGGACTCT---GAATCCGATG----TGGTTTCTGTTCTCGGT----GATGGTGCAGAGCTGTGAGCCAGTGGTA--GGGTGTCCTTTAAATTCCAGC-TCAGTACACTAGTTAATGAACTTGGCTGACTGA-TAAAAATGTTTTCAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39895223 258 + 64411610 GGGATCCATCCCAGCCCTCT---AAGGAGCGGT---GC--AAAGGTTCTT-ATCCTA--TTTATCGGAGCCAGTGTCCAGAAAAGGAAGCTTGTGG-TTT-GAGACATTCTGTAAATCTGGTTCCAAGAGTACGAGGTAGGACTCT---GAATCCGATG----TGGTTTCTGTTCTCGGT----GATGGTGCAGAGCTGTGAGCCAGTGGTA--GGGTGTCCTTTAAATTCCAGC-TCAGTACACTAGTTAATGAACTTGGCTGACTGA-TAAAAATGTTTTCAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6312820 258 - 8369475 GGGATCCATCCCAGCCCTCT---AAGGAGCGGT---GC--AAAGGTTCTT-ATCCTA--TTTATCAGAGCCAGTGTCCAGAAAAGGAAGCTTGTGG-TTT-GAGACATTCTGTAAATCTGGTTCCAAGAGCACGAGGTAGGACTCT---GAATCCGATG----TGGTTTTTGTTCTCGGT----GATGGTGCAGAGCTGTGAGCCAGTGGTA--GGGTGTCCTTTAAATTCCAGC-TCAGTACACTAGTTAATGAACTTGGCTGACTGA-TAAAAATGTTTTCAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63905732 258 - 106955855 GGGATCCATCCCAGCCCTCT---AAGGAGCGGC---GC--AAAGGTTCTT-ATCCTA--TTTATCGGAGCCAGTGTCCAGAAAAGGAAGCTTGTGG-TTT-GAGACATTGTGTAAATCTGGTTCCAAGAGCACGAGGTAGGACTCT---GAATCCGATG----TGGTTTCTGTTCTCGGT----GATGGTGCAGAGCTGTGAGCCAGTGGTA--GGGTGTCCTTTAAATTCCAGC-TCAGTACACTAGTTAATGAACGTGGCTGACTGA-TAAAAATGTTTTCAGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30216874 257 + 53671032 GGGATCCGTCCCAGCCCTCT---AAGGAGTGGT---GC--AAAAGTTCTT-ATCCTG--TTTATCGGAGTCAGTGTCCAGAAAAGGAGGCTTGCGG-TTT-GAGACA-TCTATAAATCTGGTTCTGAGAGCACGAGGTAGGACTCT---GAATCCTATG----TGGTTTCTGTTCTCCGT----GATGGTACAGAGCTGTGAGCCAGTGGTA--GGGTGTCCTTAAAATTCCAGT-TCAGTTCACTAGTTAATGAACTTGGCTAACTGA-TAAAAATATTTTCAGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670289 257 + 59248254 GGGATCCGTCCCAGCCCTCT---AAGGAGTGGT---GC--AAAAGTTCTT-ATCCTG--TTTATCGGAGTCAGTGTCCAGAAAAGGAGGCTTGCGG-TTT-GAGACA-TCTATAAATCTGGTTCTGAGAGCACGAGGTAGGACTCT---GAATCCTATG----TGGTTTCTGTTCTCCGT----GATGGTACAGAGCTGTGAGCCAGTGGTA--GGGTGTCCTTAAAATTCCAGT-TCAGTTCACTAGTTAATGAACTTGGCTAACTGA-TAAAAATATTTTCAGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537106 257 - 13342542 GGGATCCGTCCCAGCCCTCT---AAGGAGTGGT---GC--AAAAGTTCTT-ATCCTG--TTTATCGGAGTCAGTGTCCAGAAAAGGAGGCTTGCGG-TTT-GAGACA-TCTATAAATCTGGTTCTGAGAGCACGAGGTAGGACTCT---GAATCCTATG----TGGTTTCTGTTCTCCGT----GATGGTACAGAGCTGTGAGCCAGTGGTA--GGGTGTCCTTAAAATTCCAGT-TCAGTTCACTAGTTAATGAACTTGGCTAACTGA-TAAAAATATTTTCAGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467020 257 + 7714307 GGGATCCATCTCAACCCTCT---AAGGAGTGGT---GC--AAAAGTTCTT-ATCCTG--TTTATCGGAGTCAGTGTCCAGAAAAGGAGGCTTGCGG-TTT-GAGACA-TCTATAAATCTGGTTCTGAGAGCACGAGGTAGGACTCT---GAATCCTATG----TGGTTTCTGTTCTCCGT----GATGGTACAGAGCTGTGAGCCAGTGGTA--GGGTGTCCTTAAAATTCCAGT-TCAGTTCACTAGTTAATGAACTTGGCTGACTGA-TAAAAATATTTTCAGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273140 253 + 50890351 GGGATCCATCCCAGCCCTCT---AAGGAGTGGT---GC--AAAGGTTCTT-ATCCTG--TTTATCGGAGTCAGTGTCCAGAAAAGGAGGCTTGCGG-TTT-GAGACA-TCTATAAATCTGGTTCTGAGAGCACGAGGTAGGACTCT---GAATCCGATG----TGGTTTCTGTTCTCCGT----GATGGTACAGAGCTGTGAGCCAGTGGTA--GGGTGTCCTTAAAATTCCAGT-TCGGTTCAC----TAATGAACTTGGCTGACTGA-TAAAAATATTTTCAGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898136 257 - 2385121 GGGATCCATCCCAGCCCTCT---AAGGAGTGGT---GC--AAAAGTTCTT-ATCCTG--TTTATCGGAGTCAGTGTCCAGAAAAGGAGGTTTGCAG-TTT-GAGACA-TCTATAAATCTGGTTCTGAGAGCACGAGGTAGGACTCT---GAATCCTATG----TGGTTTCTGTTCTCCGT----GATGGTACAGAGCTGTGAGCCAGTGGTA--GGGTGTCCTTAAAATTCCAGT-TCAGTTCACTGGTTAATGAACTTGGCTGACGGA-TAAAAATATTTTCAGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2338754 257 + 4274983 GGGATCCATCCCAGCCCTCT---AAGGAGTGGT---GC--AAAGATTCTT-ATCCTG--TTTATCAGAGTCAGTGTCCAGAAAAGGAGGCTTGTGG-TTT-GAGACA-TCTATAAATCTGGTTCTGAGAGCACAAGGTAGGACTCT---GAATCCGATG----TGGTTTCTATTCTCCGT----GATGGTACAGAGCTGTGAGCCAGTGGTA--GGGTGTCCTTTAAATTCCAGC-TCGGTTCACTAGTTAATGAACTTGGCTGACTGA-TAAAAATATTTTCAGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28570008 259 + 49145316 GGGACCCATCCCAGCCCTCT---AAGGAGCAGT---GC--AAAGGTTCTTAATCCTA--TTTATCGGAGCCAGTGTCCAGAAAAGGAGGCTTGGGG-TTT-GAGACATTCTATCAATCTGGTTCCAAGAGCATGAGATAGGACTCT---GAATCTGATA----TGGTTTCTTTACTCAGT----GATGGTACAGAGCTGTGAGCCAGTGGTA--TGGTGTCCTTTAACTTCCAGC-TCGATTCACTAGTTAATGAACTTAGCTAACTGA-TAAAAATATTTTCAGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5416665 258 + 8899380 GGGATCCATCCCAGCCCTCT---AAGGAGCAGT---GC--AAAGGTTCTT-ATCCTA--TTTATCGGAGCCAGTGTCCAGAAAAGGAGGCTTGTGG-TTT-GAGACATTCT----ATCTGGTTCCAAGAGCATGAGATAGGACTCT---GAATCTGATGTGGTTGGTTTCTTTACTTGGT----GATGGTACAGAGCTGTGAGCTAGTGGTA--TGGTGTCCTTTAAATTCCAGC-TTGATTCACTAGTTAATGAACTTGGCTGACTGA-TAAAAATATTTTCAGg i saiBol1.JH378197 C 0 I 755 s cebCap1.NW_016107633v1 1620817 257 - 2680843 GGGATCCATCCCAGCCCTCT---AAGGAGCAGT---GC---AATGTTCTT-ATCCTA--TTTATCGGAGCCAGTGTCCAGAAAAGGAGGCTTGTGG-TTT-GAGACATTCTATCAATCTAGTTTCAAGAGCATGAGATAGGACTCT---GAAAATGATG----TGGTTTCTTTACTCGGA----GATGGTACAGAGCTGTGAGCCAGTGGTA--TGGTGTTCTTTAAATTCCAGC-TCGATTCACTAGTTAATGAACTTGGCTGACTAA-TAAAAATGTTTTCAGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 371182 262 - 4471408 GGGATCCATCCCAGCCCTCT---AAGGAGCAGT---GC--AAAGGTTCTT-ACCCTA--TTTATCAGAGCCAGTGTCCAGAAAAGGAGGCTTGTGG-TTT-GAGACATTCTATCAATCTGGTTCCCAGAGCATGAGATAGGACTCT---GAATTTGATG----TGGTTTCTTTACTCAGTGATGGATGGTACAGAGCTGTGAGCCAGTGGTA--TGGTGTCCTTTAAATTCCAGC-TCAATTCACTAGTTAATGAACTTAGCTGACTGA-TAAAAATATTTTCAGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3968181 261 - 30143674 GGAACCAATCCCAACCTTCT---GAGGAGTGTT---GC--AAAGGTTCTT-GTCCTGTTTTTATCAGAGCCAGTGTGAATAAAAGGAGGCTTGTGG-TTT-GAGACA-TTTATAAATCTGGCTCCAAAAGCACAAGGTAGAAGCAA---GAGCCCACTG----TGGCTTCTGTCCTCCGT----GGCGCTGCAGAGCTGCGAGCCAGTGGCGTGGGTTGTCCTTTAAATTCCAGC-TCAGCTCAC-AGTTAATGGACTTGGCTGCCTGATTAAAAATATTTTCAGG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 584526 260 + 2501019 GGGATCGATCCCAGCCGTCT---GAGGGGTGAC---GC--GAAGGTCCTC-ATCCTG--TTTATCAGAGCCAGTGCTAATAAAAGGAGGCTTGTGG-TTT-GAGACA-TTTATAAATGTGGCTCCAAGAGCACAAGGTAGAAGAAGTATGACTCTAATG----CGGCTTCTGTCCTCAGT----GACGGTGCAGAGCTGTGAGCCGGTGGTG-GGGGCGTCCTTTAAATTCCAGC-TCGGCTCAC-AGTTAATGAACTTGGCTGCCCGA-TAAAAATATTTTCAGG i proCoq1.NW_012149263v1 I 73 C 0 s otoGar3.GL873654 5489593 253 + 5549422 GGGATCGGTCCC--CCTCCT---GAGGAGTGAT---GC--AGAGGTTCTT-ATCCTA--TTTATCGGAGCCACTGTTAATAAAGGGATGCTTGTGG-TCT-GAGACT-ATCATAAATCTGGCTCCAAGAACACAACGTAGAACT-----GTGACTAATG----TGGTTTCTCTTCTCAGT----GATGGTACATAGCCATGGGCCAGAGGCA-TGGATGTCCTTTAAATTCCAGC-CAGGCTTGT-AATTAATGCATTTGGCTGCCTGA-TAAAAATATTTTCAGG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111098843 160 - 145441459 ------------------------GGGAGTGGC---CCTGTGAGGTCCTA-AGTCTG--TTTGCCAGGGCCGGAGTTAGGAAAGGGC--CTTGTGG-TTT---------------------------------------------------------TG----AGGTTCC----ACCAGC----TCGGGGCCAGACCTGTGAGCCTGAGCCA--GTGTCTCCT---AATCACAGC-TCAGTTCAT-ATTTAAT-----------------AAAAAATACTTCCAGA i mm10.chr7 C 0 C 0 s canFam3.chr1 4619023 256 - 122678785 -GGAT-GATCCCAAACTTCTGAGGAGGAGGGAT---GC--AAAGGTTCTT----CTG--TTTTTCAGAGGCAGTGTTAGTAAAAGCAAGCTTGTGG-TTTTGAGACA-TTTATAAATCTGGCTCCAAGAGCACGTGGTGAGACTAT---GAATCCAGTG----TGGTTTCTGTTCTCAGT----GATGGTACAGAGCTGCGAGCCAGTGGTG-TGGGTGTCCTTTAAATTCCGGC-TTGGTTCAT-ATTTAACGAACTTGGCTGACTGA-TAAAAATGTTTTCAGG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 345112 258 + 643850 GGGAGCAATCCCAGCCTTCT---AAGGAGGAATCACGC--AAAGGTTCTT-ATCCTA--TTTTT---AGTCAGTGTTAATAAAAGCAAGCTTGTGACTTT-GAGACA-TTTATAAATCTCACTCTCAGAACACATGGTAGAACTA----GAGTCCAGAA----TGGTTTCTGTTCTCAGT----GATGGTGCAGAGCCGTGAGCCAGTGGTA-TGGATGTCTTTTATGATACAGTGTAGGCTCAT-ATTTAATGAACTAGGCTAATTGA-TAAAAATGTTTTTAGA i dasNov3.JH563638 C 0 C 0 a score=927121.000000 s hg38.chr19_GL383574v1_alt 80727 80 + 155864 TTTAGCTCAT-----------------------------------------------------GAACATATCAAC-ATAGACCTAAATATAATTCCAGTTTGTCATGAA------TGTTGATTTTTTGAGGAAATGCT-TT s panTro5.chr19 36149295 80 + 61309027 TTTAGCTCAT-----------------------------------------------------GAACATATCAAC-ATAGACCTAAATATAATTCCAGTTCGTCATGAA------TGTTGATTTTTTGAGGAAATGCT-TT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39895481 80 + 64411610 TTTAGCTCAT-----------------------------------------------------GAACATATCAAC-ATAGACCTAAATATAATTCCAGTTCGTCATGAA------TGTTGATTTTTTGAGGAAATGCT-TT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313078 80 - 8369475 TTTAGCTCAT-----------------------------------------------------GAACATATCAAC-ATAGACCTAAATATAATTCCAGTTCATCATGAA------TGTTGATTTTTTGAGGAAATGCT-TT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63905990 80 - 106955855 TTTAGCTCAT-----------------------------------------------------GAACATATCAAC-ATAGACCTAAATATAATTCCAATTCATCATAAA------TGTTGATTTTTTGAGGAAATGCT-TT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217131 79 + 53671032 TTTAGCTCAT-----------------------------------------------------AAGCATATCAAC-GTAGACCTGAATATAATTCCAGTTCATCATGAG------TGTTGA-TTTTTGAGAAAATGCT-TT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670546 79 + 59248254 TTTAGCTCAT-----------------------------------------------------AAGCATATCAAC-GTAGACCTGAATATAATTCCAGTTCATCATGAG------TGTTGA-TTTTTGAGAAAATGCT-TT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537363 79 - 13342542 TTTAGCTCAT-----------------------------------------------------AAGCATATCAAC-GTAGACCTGAATATAATTCCAGTTCATCATGAG------TGTTGA-TTTTTGAGAAAATGCT-TT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467277 79 + 7714307 TTTAGCTCAT-----------------------------------------------------AAGCATATCAAC-GTAGACCTGAAGATAATTCCAGTTCATCATGAG------TGTTGA-TTTTTGAGGAAATGCT-TT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273393 79 + 50890351 TTTAACTCAT-----------------------------------------------------AAGCATATCAAC-GTAGACCTGAATATAATTCCAGTTCATCATGAG------TGTTGA-TTTTTGAGGAAATGCT-TT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898393 79 - 2385121 TTTAGCTCAT-----------------------------------------------------AAGCATATCAAC-GTAGACCTGAATATAATTCCAGTTCATCATGAG------TGTTGA-TTTTTGAGAAAATGCT-TT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2339011 79 + 4274983 TTTAGCTCAT-----------------------------------------------------AAGCATATCAAC-GTAGACCTGAATATAATTCCAGTTCATCATGAG------TGTTGA-TTTTTGAGGAAATGCT-TT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28570267 122 + 49145316 TTTAGCTCATCAACATATCAACAGATAGACATCATAA--------GTC--ATAATCATAACACAAACATATCAAC-ATAGACCTGAGTATAATTCCAGTTCATCATGAA------TGTTGA-TTTTTGAGGAAATGCT-TT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1621074 132 - 2680843 TTTAGCTCATCAACATATCAACAGATAGACATCAAGACATCATAAGTCATATAATCATAACACAAACATATCAGC-ATAGACCTGAATATAATTCCAGTTCATCGTGAA------TGTTGA-TTATTGAGGAAATGCT-TT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 371444 124 - 4471408 TTTAGCTCATCAACATATCAACAGATAGACATCATAA--------GTCATATAATCATAACACAAACATAGCAGC-ATAGACCTGAATATAATTCCAGTTCATCATGAA------TGTTGA-TTTTTGAGGAAATGCT-TT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3968442 79 - 30143674 TTGAGCTCAT-----------------------------------------------------AAACATATCAGA-ATAGACCTGAATTTAATTCCAGTTCATAATGAA------TGTTG--ATTTGGAGGAAATGCCTTA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 584786 78 + 2501019 TTGAGCTCAT-----------------------------------------------------AAACATATCAAA-ATAGACCTGAATTTAATTGCAGTTCATAATGAA------TGCTG--ATTTGAAGGAAATGCC-TG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5489846 72 + 5549422 TTTAGGTCAG-----------------------------------------------------AAACATATCAAA-ATATACCTGAATTTAATTCCAGTTCATAACAA--------------TTTTTAAGGAAATGCT-TT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111099003 78 - 145441459 -TTAAGCCAT-----------------------------------------------------GAACCTGTCACTAAAAGACCCAAGTCTGACTCCAGGGCAGGCTGAG-------GTTGA-TGTTTGACGAAATGCC-TT i mm10.chr7 C 0 C 0 s canFam3.chr1 4619279 84 - 122678785 TTTAGCTCAT-----------------------------------------------------AAACATATCAAA-ATAGACCTGAATCTGATTTCAGTTCGTAATGAATTGGATTGTTGA--TTTTAAGGAAACATT-TT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 345370 75 + 643850 TTTAGCTCAT-----------------------------------------------------AAACAT--CAAA-TTAGATCTGAATCTGATTT-AGTCATAAGTGCA------TGTTGA-TTTTAAAGAAATTATT-T- i dasNov3.JH563638 C 0 C 0 e saiBol1.JH378197 5416923 755 + 8899380 I a score=1475895.000000 s hg38.chr19_GL383574v1_alt 80807 96 + 155864 AAAATGTACTGATGCCCATGTTGTGGTTG------------------TAAGGAAACAAAGCAGCTCTGTGAGGCCAAAGCATATTTCAGTTCAATAGTGAGGCTTTCTTAGAAA s panTro5.chr19 36149375 96 + 61309027 AAAATGTACTGATGCCCATGTTGTGGTTG------------------TAAGGAAACAAAGCAGCTCTGTGAGGCCAAAGCATATTTCAGATCAATAGTAAGGCTTTCTTAGAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39895561 96 + 64411610 AAAATGTACTGATGCCCATGTTGTGGTTG------------------TAAGGAAACAAAGCAGCTCTGTGAGGCCAAAGCATATTTCAGATCAATAGTAAGGCTTTCTTAGAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313158 96 - 8369475 AAAATGTACTGATGCCCACGTTGTGGTTG------------------TAAGGAAACAAAGCAGCTCTGTGAGGCCAAAGCATATTTCAGTTCAATAGTAAGGCTTTCTTAGAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906070 96 - 106955855 AGAACGTACTGATGCCCATGTTGTGGTTA------------------TAAGGAAACAAAGCAGCTCTGTGAGGCCAAAGCATATTTCAGTTCAATAGTAAGGCTTTCTTAGAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217210 93 + 53671032 AAAATGTCCTGATGCCCATGTTGTGGTTT---------------------ATAAACAAAGCAGGTCTGTGAGGCCAAAGCATATTTCAGTTCAATAGTAAGGCTTTCTTAGAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670625 93 + 59248254 AAAATGTCCTGATGCCCATGTTGTGGTTT---------------------ATAAACAAAGCAGGTCTGTGAGGCCAAAGCATATTTCAGTTCAATAGTAAGGCTTTCTTAGAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537442 93 - 13342542 AAAATGTCCTGATGCCCATGTTGTGGTTT---------------------ATAAACAAAGCAGGTCTGTGAGGCCAAAGCATATTTCAGTTCAATAGTAAGGCTTTCTTAGAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467356 93 + 7714307 AAAATGTCCTGATGCCCATGTTGTGGTTT---------------------ATAAACAAAGCAGGTCTGTGAGGCCAAAGCATATTTCAGTTCAATAGTAAGGCTTTCTTAGAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273472 93 + 50890351 AAAATGTCCTGATGCCCATGTTGTGGTTT---------------------ATAAACAAAGCAGGTCTGTGAGGCCAAAGCATATTTCAGTTCAATAGTAAGGCTTTCTTAGAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898472 93 - 2385121 AAAATGTCCTGATGCCCATTGTGTGGTTT---------------------ATAAACAAAGCAGGTCTGTGAGGCCAAAGCATATTTCAGTTCAATAGTAAGGCTTTCTTAGAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2339090 93 + 4274983 AAAATGTCCTGATGTCCATGTTGTGGTTT---------------------ATAAACAAAGCAGGTCTGTGAGGCCAAAGCATATTTCAGTTCAATAGTAAGGCTTTCTTAGAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28570389 97 + 49145316 AAAATACACTGATGCCCATGTTGTGGTTT---------------A--TAAGGAAACAAAGCAGCTCTGTGAGGCCAAAGCATATTTCAGTTCAATAATAAGGCTTTCTTAGAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5417678 97 + 8899380 aaaaaaTACGGGTGCCCATGTTGTGGTCT---------------A--TAAGGAAACAAAGCAGCTCTGTGAGGCCAAAGCATATTTCTGTTCAATAATAAGGCTTTCTTAGAAA i saiBol1.JH378197 I 755 C 0 s cebCap1.NW_016107633v1 1621206 97 - 2680843 AAAATATACGGATGCCCATGTTGTGGTTT---------------A--TAAGGAAACAAAGCAGCTCTGTGAGGCCAAAGCATATTTCAGTTCAATAATAAGGCTTTCTTAGAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 371568 97 - 4471408 AAAATATACTGATGCCCATGTTGCGGTTT---------------A--TAAGGAAACAAAGCAGCTCTGTGAGGCCAAAGCATATTTCAGTTCAATAATAAGGCTTTCTTAGAAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3968521 97 - 30143674 AAAATGTACTGATGCCCATGTTGTGGTTT---------------G--TAAGGACACAAAGCAGCTCTGTGAGACCGAAGCGTATTTCAGTTCAATAATAAGGCTTTCTTAGAAA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 584864 96 + 2501019 AACGTGTACTGATG-CCATGTTGTGGTTT---------------G--TAAGGAAACAAAGCGGCTCTGTGAGACCGAAGCGCGTTTCAGTTCAGTAATAAGGCTTTCTTAGAAA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5489918 97 + 5549422 CAGACATACTGATGCCCACGTTGTGGTTT---------------A--GAAGGAAACAAAGCAGCTCTGTGAGACCAAAGCATATTTCAGTTCAATAATAAGGCTTTCTTAGATG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111099081 105 - 145441459 AAAATGTGCTGATG-CCGTGTTATGGCTTTTTAGTCCTAGGCTTT--CAGGGAAACAAAACAGCTAGACGAGGCGGGAGCATGTTTTGAGTCAGGAGTGAGGCTTTC------G i mm10.chr7 C 0 C 0 s canFam3.chr1 4619363 93 - 122678785 AAAATGCACCAATGTCCAGGTTGTGGTTT---------------A--TAAAGAAACAAAGTAGCACTGCGAGGCCAAAGCATATTTCAGTTCAATAATCAGGCTTTCTT----A i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 345445 99 + 643850 AAAATACACTGGTGACTATGCTGTGGTTT---------------ATTTTTTTTAAAAAGGCAGTTCTGGAAGGACAAAGCGTATTTCAGTTCAGTAATAAGTCTTTTTAAGAAA i dasNov3.JH563638 C 0 I 27 a score=168868.000000 s hg38.chr19_GL383574v1_alt 80903 9 + 155864 GAATGACTC s panTro5.chr19 36149471 9 + 61309027 GAATGACTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39895657 9 + 64411610 GAATGACTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313254 9 - 8369475 GAATGACTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906166 9 - 106955855 GAATGACTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217303 9 + 53671032 GAATGACTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670718 9 + 59248254 GAATGACTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537535 9 - 13342542 GAATGACTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467449 9 + 7714307 GAATGACTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273565 9 + 50890351 GAATGACTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898565 9 - 2385121 GAATGACTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2339183 9 + 4274983 GAATGACTC i colAng1.NW_012111697v1 C 0 I 2060 s calJac3.chr22 28570486 9 + 49145316 GAATGACTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5417775 9 + 8899380 GAATGACTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1621303 9 - 2680843 GAATGACTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 371665 9 - 4471408 GAATGACTC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3968618 9 - 30143674 GAATGACTC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 584960 9 + 2501019 GAGTGACTC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5490015 9 + 5549422 GAGTGACTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111099186 9 - 145441459 GGGTGACTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4619456 9 - 122678785 GAGTGACTC i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 345544 27 + 643850 I a score=1023692.000000 s hg38.chr19_GL383574v1_alt 80912 89 + 155864 ATAGTCACTCAGAGTT-GAGTCGCACAGAAACAACCGAGAGCAGACAGCAAGGAACGGCAGGGCCCAGAAGGTCCAGCCTTTCCCT-------CCAG s panTro5.chr19 36149480 89 + 61309027 ATAGTCACTCAGAGTT-GAGTCGCACAGAAACAACTGAGAGCAGACAGCAAGGAACAGCAGGGCCCACAAGGTCCAGCCTTTCCCT-------CCAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39895666 89 + 64411610 ATAGTCACTCAGAGTT-GAGTCGCACAGAAACAACTGAGAGCAGACAGCAAGGAACAGCAGGGCCCACAAGGTCCAGCCTTTCCCT-------CCAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313263 89 - 8369475 ATAGTCACTCAGAGTT-GAGTCGCACAGAAACAACTGAGAGCAGACAGCAAGGAATGGCAGGGCCCAGAAGGTCCAGCCTTTCCCT-------CCAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906175 88 - 106955855 ATAGTCACTCAGAGTT-GAGTCTCACAGAAGCAACAGAGAGCAGACAGCAAGGAAC-GCAGGGCCCAGAAGGTCCAGCCTTTCCCT-------CCAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217312 88 + 53671032 ATAGTCACTCAGAATT-GAGTTGCACAGAAACAACTGAGAGCAGACAGCAAGGAAC-GCAGGGCCCAGAAGGTCCAGCCTTTCTCT-------CCAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670727 88 + 59248254 ATAGTCACTCAGAATT-GAGTTGCACAGAAACAACTGAGAGCAGACAGCAAGGAAC-GCAGGGCCCAGAAGGTCCAGCCTTTCTCT-------CCAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537544 88 - 13342542 ATAGTCACTCAGAATT-GAGTTGCACAGAAACAACTGAGAGCAGACAGCAAGGAAC-GCAGGGCCCAGAAGGTCCAGCCTTTCTCT-------CCAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467458 88 + 7714307 ATAGTCACTCAGAATT-GAGTCGCACAGAAACAACTGAGAGCAGACAGCAAGGAAC-GCAGGGCCCAGAAGGTCCAGCCTTTCTCT-------CCAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273574 88 + 50890351 ATAGTCACTCAGAATT-GAGTCGCACAGAAACAACTGAGAGCAGACAGCAAGGAAC-GCAGGGCCCAGAAGGTCCAGCCTTTCTCT-------CCAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898574 88 - 2385121 ATAGTCACTCAGAATT-GAGTCGCACAGAAACAACTGAGAGCAGACAGCAAGGAAC-GCAGGGCCCAGAAGGTCCAGCCTTTCTCT-------CCAG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28570495 88 + 49145316 ATAGTCACTCACAGTT-GGGTCGCACAGAAACAACTGAGAGCAGACAGCAAGGAAC-GCAGGGCCCAGAAGGTCCAGCCTCTCCCT-------CCAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5417784 88 + 8899380 ATAGTCACTCACAGTT-GGGTTGCACAGAAACAACTGAGAGCAGACAGCAAGGAAC-GAAGGGCCCAGAAGATCCAGCCTCTCCCT-------CCAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1621312 88 - 2680843 ATAGTCACTCACAGTT-GGGTCGCACAGAAACAACTGAGAGCAGACAGCAAGGAAC-GCAGGTCCCAGAAGGTCCAGCCTCTCCCT-------CCAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 371674 88 - 4471408 GTAGTCACTCACGGTT-GGGTCGCACAGAAACAACTGAGAGCAGACAGCAAGGAAC-GCAGGGCCCAGAAGGTCCAGCCTCTCCCT-------CCAG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3968627 89 - 30143674 ATAGTCACTCGGAGTTATGGTTGCACAGAAACAACTGTGAGCTGCCAACAAGGAAC-GCATGGCCCAGAAGGTCTTGCCTTTGCCT-------CCAG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 584969 88 + 2501019 ATAGTCACTCGGAGTTAGAGTTGCACAGAAACAACTGTGAGCTGCCAACAAGGAAC-GCACGGCCCAG-AGGTCTTGCCTTTCCCT-------CCAG i proCoq1.NW_012149263v1 C 0 I 103 s otoGar3.GL873654 5490024 89 + 5549422 AGAGTCACCCAGAGTCAGGGCTGCACAGAGACTGCTGAGAGCCGCCAGCAAGGAGC-GCGTGGCCCAGAAGGTCTTTCCTCTCCCT-------CCAG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111099195 77 - 145441459 ACAGTCACTGATGCTT-TAGGAGCATA-AATCTGCCTAGAGC-------------C-ACTCAGCCCAGAAAGT----TACTTCCCTAAGACTGCCAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4619465 28 - 122678785 -------------------------------------------------------------CATTTAGTAAGTCC-GCCTTTGCCT-------CCAG i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 345544 27 + 643850 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I a score=-7154.000000 s hg38.chr19_GL383574v1_alt 81001 3 + 155864 GC-T s panTro5.chr19 36149569 3 + 61309027 GC-T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39895755 3 + 64411610 GC-T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313352 3 - 8369475 GC-T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906263 3 - 106955855 GC-T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217400 4 + 53671032 GCTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670815 4 + 59248254 GCTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537632 4 - 13342542 GCTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467546 4 + 7714307 GCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273662 4 + 50890351 GCTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898662 4 - 2385121 GCTT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28570583 4 + 49145316 GCTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5417872 4 + 8899380 GCTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1621400 4 - 2680843 GCTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 371762 4 - 4471408 GCTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3968716 1 - 30143674 -C-- i micMur3.chr22 C 0 I 51 s otoGar3.GL873654 5490113 2 + 5549422 AC-- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111099272 1 - 145441459 ---T i mm10.chr7 C 0 I 2 s canFam3.chr1 4619493 3 - 122678785 ACT- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 585057 103 + 2501019 I e dasNov3.JH563638 345544 27 + 643850 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I a score=277542.000000 s hg38.chr19_GL383574v1_alt 81004 35 + 155864 -GAAGGGT----------TAGGGAAGATCGCCAACCTTAAAGGGGG s panTro5.chr19 36149572 35 + 61309027 -GAAGGGT----------TAGGGAAGATCGCCAACCTTAAAGAGGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39895758 35 + 64411610 -GAAGGGT----------TAGGGAAGATCGCCAACCTTAAAGAGGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313355 35 - 8369475 -GAAGGGT----------TAGGGAAGATCGCCAACCTTAAAGCGGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906266 35 - 106955855 -GAAGGGT----------TAGGGAAGATCGCCAACCTTAAAGGGGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217404 35 + 53671032 -GAAGGGT----------TAGGGAAGATCACCAACCTTGAAGAAGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670819 35 + 59248254 -GAAGGGT----------TAGGGAAGATCACCAACCTTGAAGAGGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537636 35 - 13342542 -GAAGGGT----------TAGGGAAGATCACCAACCTTGAAGAGGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467550 35 + 7714307 -GAAGGGT----------TAGGGAAGATCACCAACCTTGAAGAGGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273666 35 + 50890351 -GAAGGGT----------TAGGGAAGATCGCCAACCTTGAAGAGGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898666 35 - 2385121 -GAAGGGT----------TAGGGAAGATCACCAACCTTGAAGAGGG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28570587 35 + 49145316 -GAAGGGT----------TAGGGAAGGTCGCCAACCTTAAAGGGGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5417876 35 + 8899380 -GAAGGGT----------TAGGGAAGTTTGCCAACCTTGAAGCGGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1621404 35 - 2680843 -GAAGGGT----------TAGGGAAGATCGCCAACCTTGAAGGGGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 371766 35 - 4471408 -GAAGGGT----------TAGGGAAGATCGCCAACCTTGAAGGGGG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5490115 17 + 5549422 --------------------GGGAAAAG---CAGTCTGGG------ i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111099275 21 - 145441459 ------GC----------AAGTGAGCAGTGCCAAGGT--------- i mm10.chr7 I 2 C 0 s canFam3.chr1 4619496 43 - 122678785 CCAAGGGTAGTTGGGAGAGAGGACAGAATGCCAGTCTTCACGG--- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 585057 103 + 2501019 I e micMur3.chr22 3968717 51 - 30143674 I e dasNov3.JH563638 345544 27 + 643850 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I a score=626988.000000 s hg38.chr19_GL383574v1_alt 81039 60 + 155864 TGTGAGAGGCCTGGGCCCAGGTGAGATTGTACTGAATTCCAGTAAACA------------G--TGTACAGTCAT s panTro5.chr19 36149607 60 + 61309027 TGTGAGAGGCCTGGGCTCAGGTGAGATTGTACTGAATTCCAGTAAACA------------G--TGTACAGTCAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39895793 60 + 64411610 TGTGAGAGGCCTGGGCCCAGGTGAGATTGTACTGAATTCCAGTAAACA------------G--TGTACAGTCAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313390 60 - 8369475 TGTGAGAGGCCTGGGCCCAGGTGAGATTGTACTGAATTCCAGTAAACA------------G--TGTACAGTCAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906301 58 - 106955855 TGTGAGAGGCCTGGGCCCAGGTGAGATTGTACTGAATTCCAGTAAAC----------------TGTACAGTCAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217439 60 + 53671032 TAAGAGAGGCCTGGGCCCAGGTGAGATTGTACTGAACTCCAGTAAACG------------G--TGTACAGTTGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670854 60 + 59248254 TAAGAGAGGCCTGGGCCCAGGTGAGATTGTACTGAACTCCAGTAAACG------------G--TGTACAGTTGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537671 60 - 13342542 TAAGAGAGGCCTGGGCCCAGGTGAGATTGTACTGAACTCCAGTAAACG------------G--TGTACAGTTGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467585 60 + 7714307 TATGAGAGGCCTGGGCCCAGGTGAGATTGTACTGAACTCCAGTAAACG------------G--TGTACAGTTGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273701 60 + 50890351 TATGAGAGGCCTGGGCCCAGGTGAGATTGTACTGAACTCCAGTAAACG------------G--TGTACAGTTGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898701 60 - 2385121 TATGAGAGGCCTGGGCCCAGGTGAGATTGTACTGAACTCCAGTAAACG------------G--TGTACAGTTGT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28570622 60 + 49145316 TGTGAGAGGCCTAGGCCCAGGTGAGATTGTTCTGAATTCCAGTAAATG------------G--TGTACAGTCAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5417911 60 + 8899380 TGTGAGAGGCCTAGGCCCAGGTGAGATTGTACTGAATTCCAGTAAATG------------G--TGTACAGTCAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1621439 60 - 2680843 TGTGAGAGGCCTAGGCCCAGGTGAGATTGTACTGAATTCCAGTAAATG------------G--TGTACAGTCAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 371801 44 - 4471408 ----------------CCAGGTGAGATTGTACTGAATTCCAGTAAATG------------G--TGTACAGTCAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3968768 59 - 30143674 TGTGAGAAGCCTGGGCCCAGGCAGGACTGGAGTGAATTCCAGTGAACG------------G--CTGACAGCCA- i micMur3.chr22 I 51 C 0 s otoGar3.GL873654 5490132 63 + 5549422 AGTGAAGGA---------ATGTGAGATTGTCATTAATTCCAGTGAGTGGTGGAAGTCAGTG--CTGGCAGTCAT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111099296 61 - 145441459 TGTGTGGAGCCTGGGCCCACGCAGGA-TGTAATGAGTTCCAGCTGCTA------------GCTTTTGTAGCCAT i mm10.chr7 C 0 C 0 s canFam3.chr1 4619539 60 - 122678785 TATGAGAAGCCCAGGCCCAGGCAACACTGTGTTGAGTTTCTGTGAATG------------G--TTGACAGTCGT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 585057 103 + 2501019 I e dasNov3.JH563638 345544 27 + 643850 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I a score=1887193.000000 s hg38.chr19_GL383574v1_alt 81099 136 + 155864 TCCAGGACAGAGGACAGGAACATGTTTACTAGGTGTCTGGAGTGCACCTCTATAATCCTCATACACAC-TAATCCAGATAATCCTGGGATGCTGGCCTCACGCAGGATTGTTGATGAGAATGCAAATCCCAACATTG s panTro5.chr19 36149667 136 + 61309027 TCCAGGACAGAGGACAGGAACATGTTTACTAGGTGTCTGGAGTGCACCTCTATAATCCTCATACACAC-TAATCCAGATAATCCTGGGATGCTGGCCTCACGCAGGATTGTTGATGAGAATGCAAATCCCAACATTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39895853 136 + 64411610 TCCAGGACAGAGGACAGGAACATGTTTACTAGGTGTCTGGAGTGCACCTCTATAATCCTCATACACAC-TAATCCAGATAATCCTGGGATGCTGGCCTCACGCAGGATTGTTGATGAGAATGCAAATCCCAACATTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313450 136 - 8369475 TCCAGGACAGAGGACAGGAACATGTTTACTAGGTGTCTGGAGtgcacctctgtaatcctcatatgcac-taatccagataatcctgggatgctggcctcacgcaggattgttgatgagaatgcaaatCCCAACATTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906359 137 - 106955855 TCCAGGACAGAGGACAGGAACATGTTTACTAGGTGTCTGGAGTGCACCTCTATCATCCTCATACGCACTTAATCCAGATAATCCTGGGATGCCGGCCTCACGCAGGATTGTTGATGAGAATGCAAATCCCAACATTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217499 137 + 53671032 TCCAGGACAGAGGACAGGAACATGTTTACTAGGTGTCTGGAGTGCATCTCTGTAATCCTCATATGCACTTAATCCAGATAATCCTGGGATGCCAGCCTCACGCAGGATCATTGATGAGAATGCAAATCCCAACATTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34670914 137 + 59248254 TCCAGGACAGAGGACAGGAACATGTTTACTAGGTGTCTGGAGTGCATCTCTGTAATCCTCATATGCACTTAATCCAGATAATCCTGGGATGCCAGCCTCACGCAGGATCATTGATGAGAATGCAAATCCCAACATTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537731 137 - 13342542 TCCAGGACAGAGGACAGGAACATGTTTACTAGGTGTCTGGAGTGCATCTCTGTAATCCTCATATGCACTTAATCCAGATAATCCTGGGATGCCAGCCTCACGCAGGATCATTGATGAGAATGCAAATCCCAACATTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467645 137 + 7714307 TCCAGGACAGAGGACAGGAACATGTTTACTAGGTGTCTGGAGTGCATCTCTGTAATCCTCATATGCGCTTAATCCAGATAATCCTGGGATGCCAGCCTCACGCAGGATCATTGATGAGAATGCAAATCCCAACATTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273761 137 + 50890351 TCCAGGACAGAGGACAGGAACATGTTTACTAGGTGTCTGAAGTGCATCTCTGTAATCCTCATACGCACTTAATCCAGATAATCCTGGGATGCCAGCCTCACGCAGGATCATTGATGAGAATGCAAATCCCAACATTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898761 137 - 2385121 TCCAGGACAGAGGACAGGAACATGTTTACTAGGTGTCTGGAGTGCATCTCTGTAATCCTCATACGCACTTAATCCAGATAATCCTGGGATGCCAGCCTCACGCAGGATCATTGATGAGAATGCAAATCCCAACATTG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28570682 136 + 49145316 TCCAGGACAGAGGACAGAAACATGTTTACTAGGTGCCTGGAGCACACCTTTGTAATCCTCGTACGCACTTAATCCAGATGATCCTC-GATGCTTACCTCACGCAAGGTTGTTAATGCGAATGCAAATCCCAGCATTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5417971 137 + 8899380 TCCAGGACAGAGGACAGAAACATGTTTACTAGGTGCCTGGAGTGCACCTTTGTAATCCTCGTACACACTTAATCCAGATGATCCTCGGATGCTGGCCTCACTCAAGGTCGTTGATGCGAATGCAAATCCCAGCATTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1621499 137 - 2680843 TCCAGGACAGAGGACAGAAACATGTTTACTAGGTGCCTGGAGTGCACCTTTGTAATCCTCGTACGCACTTAATCCAGATGATCCACGGATGCTGGCCTCACGCAAGGTTGTTGATGCGAATGCAAATCCCAGCATTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 371845 137 - 4471408 TCCAGGACAGAGGACAGAAACATGTTTACTAGGTGCCTGGAGTGCACCTTTGTAATCCTTGCACGCACTTAATCCAGATGATCCTCGGATGCTGGCCTCACGCAAGGTTGTTGATGCGAATGCAAATCCCAGCATTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3968827 137 - 30143674 TCCAGCACAGAGGGCTGGAACATGTTTACTAGGTGTCTGGAGTGCGCCTCTGTGATCCTGGGCCTCACCTAATCCGGATAATCCCCGGCTGCCGGCCTCACACAGGATTGTTGATGAGAACGCAGATCCCAGCATTG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 585160 136 + 2501019 TCCAGCACGGAGGACTGGGACACGTTTACTAGGTGTCC-GAGTGCGCCTCTGTGATCCTGGTGCTCACCTGATCCAGATAATCCTCGGCTGCCAGCCTCACACTGGATTGTTGATGAGAACGCAGATCCCAACACTG i proCoq1.NW_012149263v1 I 103 C 0 s otoGar3.GL873654 5490195 119 + 5549422 TCCAGCTCAGAGGACAGGAGCGTGTTTACTAGATGTCTGGAGTGTACCTCTG-----------------TAATCCAGATAATCCTCGG-GGCCCGCCTCACACAGGATTGTTGATGAGAATGCAAATCCCAACACTG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111099357 135 - 145441459 TCTAGAACCAAGAAGAGGAGCATGTTTACTAGGTGTCTGGAGGGCACCTCTATAATCCTCGCGCTCCCCTAATCCAGGTAATCCTCAGCTGCCAGCCTCCCG--GGCCTGTCATTGAAAGTACAGATCCCAGCCATG i mm10.chr7 C 0 I 12 s canFam3.chr1 4619599 137 - 122678785 CCCAGTACAGAGCACAGGAGCATGTTTACTAGATGTCTGGAGTGTGCCTCTCTAATCCTGGTGCTCACCTAATCCTGGTAATCCTCCAGTGCCAGCCTCACACAGGATTGTTGATGAGAACGCAGATCCCAACATTG i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 345544 27 + 643850 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I a score=545766.000000 s hg38.chr19_GL383574v1_alt 81235 41 + 155864 CAATTCAGGATTTTGCTT---CTACTGAAAGCATTTTGTCAATG s panTro5.chr19 36149803 41 + 61309027 CAATTCAGGATTTTGCTT---GTACTGAAAGCATTTTGTCAATG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39895989 41 + 64411610 CAATTCAGGATTTTGCTT---GTACTGAAAGCATTTTGTCAATG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313586 41 - 8369475 CAATTCAGGATTTTGCTT---GTACTGAAAGCATTTTGTCAATG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906496 41 - 106955855 CAATTCAGGATTTTGCTT---GTGCTGAAAGCATTTTGTCAATG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217636 41 + 53671032 CAATTCAGGATTTTGCTT---GTGCTGAAAGCATTTTGTCAACG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34671051 41 + 59248254 CAATTCAGGATTTTGCTT---GTGCTGAAAGCATTTTGTCAACG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537868 41 - 13342542 CAATTCAGGATTTTGCTT---GTGCTGAAAGCATTTTGTCAACG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467782 41 + 7714307 CAATTCAGGATTTTGCTT---GTGCTGAAAGCATTTTGTCAACG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273898 41 + 50890351 CAATTCAGGATTTTGCTT---GTGCTGAAAGCATTTTGTCAACG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898898 41 - 2385121 CAATTCAGGATTTTGCTT---GTGCTGAAAGCATTTTGTCAACG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28570818 44 + 49145316 CAATTCAGGATGTTGCCTGCAGTGCTGAAAGCATTCTGTCAGTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5418108 41 + 8899380 CAATTCAGGATGTTGCTT---GTGCTGAAAGCATTCTGTCAGTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1621636 41 - 2680843 CAATTCAGGATGTTGCTT---GTGCTGAAAGCATTCTGTCAGTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 371982 41 - 4471408 CAATTCAGGATGTTGCTT---GTGCTGAAAGCATTCTGTCAGTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3968964 41 - 30143674 CAATTCAGGATTTTGTTT---GTGCTGGAAGCATTTTGTAAATT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 585296 41 + 2501019 CAACTCAGGATTTCGTTT---GTCCTGGAAGCATCTGGTAAATG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5490314 41 + 5549422 CAATTCAGGATTTTGTTT---GTGCTGGAAGCATTTTGTAAATG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4619736 41 - 122678785 CAATTCAGGATTTTGCTT---GTGCTGAAATGGTTTTGTAAATT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 345544 27 + 643850 I e mm10.chr7 111099492 12 - 145441459 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I a score=96797.000000 s hg38.chr19_GL383574v1_alt 81276 10 + 155864 -TTCTCTTTTG s panTro5.chr19 36149844 10 + 61309027 -TTCTCTTTTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896030 10 + 64411610 -TTCTCTTTTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313627 9 - 8369475 -TTCTC-TCCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906537 10 - 106955855 -TTTTCTTTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217677 10 + 53671032 -TTTTCTTTTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34671092 10 + 59248254 -TTTTCTTTTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537909 10 - 13342542 -TTTTCTTTTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467823 10 + 7714307 -TTTTCTTTTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273939 10 + 50890351 -TTTTCTTTTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898939 10 - 2385121 -TTTTCTTTTG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28570862 10 + 49145316 -TTTTCATTGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5418149 10 + 8899380 -TTTTCATTGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1621677 10 - 2680843 -TTTTCATTGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 372023 10 - 4471408 -TTTTCATTGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3969005 10 - 30143674 -TTTTCTTTAG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 585337 10 + 2501019 -TTTTCTTTAG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5490355 10 + 5549422 -TTTTCATTAG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4619777 10 - 122678785 -TTTTTCTTTA i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 345571 10 + 643850 TTTCTTTTTT- i dasNov3.JH563638 I 27 C 0 e mm10.chr7 111099492 12 - 145441459 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I a score=218654.000000 s hg38.chr19_GL383574v1_alt 81286 13 + 155864 GGGTTAGCTGGGT s panTro5.chr19 36149854 13 + 61309027 GGGTTAGCTGGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896040 13 + 64411610 GGGTTAGCTGGGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313636 13 - 8369475 GGGTTAGCTGGGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906547 13 - 106955855 GGGTTAGCTGGGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217687 13 + 53671032 GGGTTAGCTGGGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34671102 13 + 59248254 GGGTTAGCTGGGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537919 13 - 13342542 GGGTTAGCTGGGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467833 13 + 7714307 GGGTTAGCTGGGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273949 13 + 50890351 GGGTTAGCTAGGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898949 13 - 2385121 GGGTTAGCTGGGT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28570872 13 + 49145316 GGGTTAGCTGGGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5418159 13 + 8899380 GGGTTAGCTGGGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1621687 13 - 2680843 GGGTTAGCTGGGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 372033 13 - 4471408 GGGTTAGCTGGGT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3969015 13 - 30143674 GGTTTAGTTGGGT i micMur3.chr22 C 0 I 484 s proCoq1.NW_012149263v1 585347 13 + 2501019 GGTTTAGTTGGGT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5490365 13 + 5549422 GGGTTAGTTGGGT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111099504 13 - 145441459 GGGTTAACTGGAC i mm10.chr7 I 12 C 0 s canFam3.chr1 4619788 13 - 122678785 GGGTTGGTTGGGT i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 345581 13 + 643850 GGGTGACTTGAAT i dasNov3.JH563638 C 0 C 0 e colAng1.NW_012111697v1 2339192 2060 + 4274983 I a score=167212.000000 s hg38.chr19_GL383574v1_alt 81299 18 + 155864 GACAGTTCTCCC-----TTGCTG s panTro5.chr19 36149867 18 + 61309027 GACAGTTCTCCC-----TTGCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896053 18 + 64411610 GACAGTTCTCCC-----TTGCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313649 18 - 8369475 GACAGTTCTCCC-----TTGCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906560 18 - 106955855 GACAGTTCTCCC-----TTGCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217700 18 + 53671032 GACAGTTCTCCC-----TTGCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34671115 18 + 59248254 GACAGTTCTCCC-----TTGCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537932 18 - 13342542 GACAGTTCTCCC-----TTGCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467846 18 + 7714307 GACAGTTCTCCC-----TTGCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273962 18 + 50890351 GACAGTTCTCCC-----TTGCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898962 18 - 2385121 GACAGTTCTCCC-----TTGCTG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28570885 23 + 49145316 GACAGTTCTCCCCCCTCCCGATC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5418172 19 + 8899380 GACAGTTCTCCC----CCCAATC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1621700 19 - 2680843 GACAGTTCTCCC----TCTGATC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 372046 19 - 4471408 GACAGTTCTCCC----CCCGATC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 585360 18 + 2501019 GATGGTTTTCCC-----TGGCTG i proCoq1.NW_012149263v1 C 0 I 533 s otoGar3.GL873654 5490378 18 + 5549422 AGTGGCTTTCCC-----GTGCTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111099517 16 - 145441459 AATGGCTC-CCC-----TCACT- i mm10.chr7 C 0 C 0 s canFam3.chr1 4619801 18 - 122678785 GTTGGTTATCGC-----TTGCTC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 345594 18 + 643850 GATGGTTATCCC-----TTGCTC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3969028 484 - 30143674 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I a score=901683.000000 s hg38.chr19_GL383574v1_alt 81317 91 + 155864 GATT-CCCAGTACTTAATAGCGTTTCTTTGACTC--AGTGGATATGTGGAACATTGCAGACTGCAA-TTT-ATAACACAGAACTGGGTATATATTT s panTro5.chr19 36149885 91 + 61309027 GATT-CCCAGTACTTAATAGCGTTTCTTTGACTC--AGTGGATATGTGGAACATTGCAGACTGCAA-TTT-ATAACACAGAACTGGGTATATATTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896071 91 + 64411610 GATT-CCCAGTACTTAATAGCGTTTCTTTGACTC--AGTGGATATGTGGAACATTGCAGACTGCAA-TTT-ATAACACAGAACTGGGTATATATTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313667 91 - 8369475 GATT-CCCAGTACTTAATAGCGTTTCTTTGACTC--AGTGGATATGTGGAACATTGCAGACTGCAA-TTT-ATAACACAGAATTGGGTATATATTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906578 93 - 106955855 TATT-CCCAGTACTTAATAGCGTTTCTTTGACTCAAAGTGGATATGTGGAACATTGCAGACTGCAA-TTT-ATAACATAGAATTAGGTATATATTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217718 93 + 53671032 TATT-GCCAGTACTTAATAGTGTTTCTTTGACTGAAAGTGGATATGTGGAACATTGTAGACTGCAA-TTT-ATAAAATATAATTAGGTATATATTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34671133 93 + 59248254 TATT-GCCAGTACTTAATAGTGTTTCTTTGACTGAAAGTGGATATGTGGAACATTGTAGACTGCAA-TTT-ATAAAATATAATTAGGTATATATTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4537950 93 - 13342542 TATT-GCCAGTACTTAATAGTGTTTCTTTGACTGAAAGTGGATATGTGGAACATTGTAGACTGCAA-TTT-ATAAAATATAATTAGGTATATATTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467864 93 + 7714307 TATT-GCCAGTACTTAATAGTGTTTCTTTGACTGAAAGTGGATATATGGAACATTGTAGACTGCAA-TTT-ATAAAATATAATTAGGTATATATTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29273980 93 + 50890351 TATT-CCCAGTACTTAATAGTGTTTATTTGACTGAAAGTGGATATGTGGAACATTGTAGACTGCAA-TTT-ATAAAATATAATTAGGTATATATTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 898980 93 - 2385121 TATG-GCCAGTACTTAATAGTGTTTCTTTGACTGAAAGTGGATATATGGAACATTGTAGACTGCAA-TTT-ATAAAATATAATTAGGTATATATTT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28570908 93 + 49145316 TATT-CCCAGTACTTAATAGCGTTTCTTTGACTTAAAGTGGATATGTGGAACATTGCAGGCTGCGA-TTT-ATAAAATAGAATTAGGTATATATTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5418191 93 + 8899380 TATT-CACAGTACTTAATAGTGTTTCTTTGACTTAAAGTGGATATGTGGAACATTGCAGGCTGCAA-TTT-ATAGAATAGAATTAGGTATATATTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1621719 93 - 2680843 TATT-CGCAGTACTTAATAGAGTTTCTTTGATTTAAAGTGGATATGTGGAACATTGCAGGCTGCAA-TTT-ATAAAGTAGAATTAGGTATGTATTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 372065 93 - 4471408 TATT-CCCAGTACTTAATAGCGTTTCTTTGACTTAAAGTGGATTTGTGGAACATTGCAGGCTGCAA-TTT-ATAAAATAGAATTAGGTATATATTG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5490396 95 + 5549422 TATTCCCCAGAATTTAACAGCGTTTCTATATCTCAAAGAGGGTATGTGGAGCATCGGAGGCTATAGTTTT-ATAAAATGGAATTAGGTGTAAATCT i otoGar3.GL873654 C 0 I 138 s mm10.chr7 111099533 57 - 145441459 ------CCTGT---------------------------TAGGTACAGGGAGTACCACAGATGGTGG-TTTAATAACATGGAATTG-----ATGGTT i mm10.chr7 C 0 I 4 s canFam3.chr1 4619819 87 - 122678785 -------CATTCCTTAACGTAATAGCTTTGTCATAAAGTGGGCATGTGGAGCCTTGCAGGTTGCAG-TTT-ATAAAATGAAATTAGGTATTGCTTT i canFam3.chr1 C 0 I 6 s dasNov3.JH563638 345612 91 + 643850 CATTCCCCAGCAGTTAATAGCATCTCTCTGTCCCAAAGTGGGTATGTGGGACAATGCAGATTGTG--TGT-ACAAAATAGAATTAGATACAGTT-- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I a score=143422.000000 s hg38.chr19_GL383574v1_alt 81408 14 + 155864 TCATTATAAAAGTA s panTro5.chr19 36149976 14 + 61309027 TCATTATAAAAGTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896162 14 + 64411610 TCATTATAAAAGTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313758 14 - 8369475 TCATTATAAAAGTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906671 14 - 106955855 TCATTATAAAAGTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217811 14 + 53671032 TCATTATAAAAGTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34671226 14 + 59248254 TCATTATAAAAGTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4538043 14 - 13342542 TCATTATAAAAGTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467957 14 + 7714307 TCATTATAAAAGTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29274073 14 + 50890351 TCATTATAAAAGAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 899073 14 - 2385121 TCATTATAAAAGTA i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28571001 14 + 49145316 TCATCATAAAAGTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5418284 14 + 8899380 TCATCGTAAAAGTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1621812 14 - 2680843 TCATCATAAAAGCA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 372158 14 - 4471408 TCATCATAAAAGTA i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111099594 14 - 145441459 TGTCCTTGAAGGCA i mm10.chr7 I 4 C 0 s canFam3.chr1 4619912 14 - 122678785 TTTTTGTAAAAATA i canFam3.chr1 I 6 I 924 s dasNov3.JH563638 345703 14 + 643850 TTATTATACACATA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I a score=193127.000000 s hg38.chr19_GL383574v1_alt 81422 19 + 155864 ---ATACATGTAAAAAGAATGC s panTro5.chr19 36149990 19 + 61309027 ---ATACATGTAAAAAGAATGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896176 19 + 64411610 ---ATACATGTAAAAAGAATGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313772 19 - 8369475 ---ATACATGTAAAAAGAATGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906685 19 - 106955855 ---ATACATGTAAAAAGAATGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217825 19 + 53671032 ---ATACATGTAAAAATAATGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34671240 19 + 59248254 ---ATACATGTAAAAATAATGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4538057 19 - 13342542 ---ATACATGTAAAAATAATGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5467971 19 + 7714307 ---ATACATGTAAAAATAATGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29274087 19 + 50890351 ---ATACATGTAAAAATAATGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 899087 19 - 2385121 ---ATACATGTAAAAATAATGC i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28571015 19 + 49145316 ---ATACATGTAAAAAGAATGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5418298 19 + 8899380 ---ATACCTGTAAAAAGAATGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1621826 19 - 2680843 ---ATACATGTAGAAAGAATGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 372172 19 - 4471408 ---ATACATGTAAAAAGAGTGC i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111099608 19 - 145441459 ---TCACATGTAAAAAGGATGC i mm10.chr7 C 0 I 2224 s dasNov3.JH563638 345717 21 + 643850 ATAACAT-TGTGAAGAGAATGT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e canFam3.chr1 4619926 924 - 122678785 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I a score=920366.000000 s hg38.chr19_GL383574v1_alt 81441 130 + 155864 AGGCCTCTTCTCTG--AT-TGGGTGGTATTTTTAAAAAGAA--------ACAAAGAATGCAGGCAGTGTAG---ATTATGTTTG-TTTTTTaaaggaaagagaag-aaaaaattctctaatcccaccacccacagc----tgacca-tgtt s panTro5.chr19 36150009 126 + 61309027 AGGCCTCTTCTCTG--AT-TGGGTGGTATTTTTAAAAAG------------AAAGAATGCAGGCAGTGTAG---ATTATGTTTG-TTTTTTaaaggaaagagaag-aaaaaattctctaatcccaccacccacagc----tgacca-tgtt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896195 126 + 64411610 AGGCCTCTTCTCTG--AT-TGGGTGGTATTTTTAAAAAG------------AAAGAATGCAGGCAGTGTAG---ATTATGTTTG-TTTTTTaaaggaaagagaag-aaaaaattctctaatcccaccacccacagc----tgacca-tgtt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313791 131 - 8369475 AGGCCTCTTGTCTG--AT-TGGGTGGTATTTTTAAAAAGAA--------ACAAAGAATGCAGGCAGTGTAG---ATTATGTTTGTTTTTTTaaaggaaagagaag-aaaaaattctctaatcccaccacccacagc----tgacca-tgtt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906704 130 - 106955855 AGGCTTCTTGTCTG--AT-TGGGTGTTATTTTTAAAAAGTA--------ACAAAGAATGCAGGCAGTGTAG---ATTATTTTTG-TTTTTTaaaggaaagagaag-aaaaaattctctaatcccaccacccagagc----tgacca-tgtt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30217844 125 + 53671032 AGGCTTCTTGTCTG--AT-TGGATGGTATTTTTAAAAAG------------AAAGAATGCAAGCAATGTAG-tttttttttttt-ttttttGAAG----GAGAAGAAAAAAATTCTCTAATCCCACCACCCAGAGC----TGACCA-tgtt i rheMac8.chr19 C 0 I 936 s macFas5.chr19 34671259 132 + 59248254 AGGCTTCTTGTCTG--AT-TGGATGGTATTTTTAAAAAGAA--------ACAAAGAATGCAAGCAATGTAG--ttttttttttt-ttttttGAAGGAGAGAGAAGAAAAAAATTCTCTAATCCCACCACCCAGAGC----TGACCA-tgtt i macFas5.chr19 C 0 I 593 s macNem1.NW_012011689v1 4538076 131 - 13342542 AGGCTTCTTGTCTG--AT-TGGATGGTATTTTTAAAAAGAA--------ACAAAGAATGCAAGCAATGTAG---TTTTTTTTTT-TTTTTTGaaggagagagaagaaaaaaattctctaatcccaccacccagagc----tgacca-tgtt i macNem1.NW_012011689v1 C 0 I 1510 s cerAty1.NW_012005268v1 5467990 128 + 7714307 AGGCTTCTTGTCTG--AT-TGGATGGTATTTTTAAAAAGAA--------ACAAAGAATGCAAGCAATGTAG------TTTTTTT-TTTTTTGAAGGAGAGAGAAGAAAAAAATTCTCTAATCCCACCACCCAGAGC----TGACCA-TGtt i cerAty1.NW_012005268v1 C 0 I 923 s chlSab2.chr6 29274106 121 + 50890351 AGGCTTCTTGTCTG--AT-TGGATGGTATTTTTAAAAAG------------AAAGAATGCAAGCAATGTAG-------TTTTAT-TTTTTTAAAG--GAGAGAAGAAAAAAATTCTCTAATCCCACCACCCAGAGC----TGACCA-tgtt i chlSab2.chr6 C 0 I 862 s manLeu1.NW_012102454v1 899106 128 - 2385121 AGGCTTCTTGTCTG--AT-TGGATGGTATTTTTAAAAAGAA--------ACAAAGAATGCAAGCAATGTAG------ATTTTTT-TTTTTTGAAGGAGAGAGAAGAAAAAAATTCTCTAATCCCACCACCCAGAGC----TGACCA-tgtt i manLeu1.NW_012102454v1 C 0 I 1498 s calJac3.chr22 28571034 123 + 49145316 AGGCTTCTTGTCTG--AT-TGGGTGGTATTTT---AAAAAA----------AAAGAATGCAGGCAGTGTAG---ACTTTTTTTT-TTTTTTaaaggaaagagaag--aaaaa-----taatcccaccacccagagcatgttaatca-tgtt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5418317 131 + 8899380 AGGCTTCTTGTCTGCAAT-CGGGTGGTATTTTTAAAAAGAA----------AAAGAATGCAGGAAGTGTAG-tttttttttttt-tttttttaaGGaaagagaag--aaaaattctctaatcccaccacccagagc----tgatca-tgtt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1621845 128 - 2680843 AGGCTTCTTGTCTG--AT-TGGGTGGTATTTTTAAAAAGAA----------AAAGAATGCAGGCAGTGTAG--ATGATTTTTTT-TTTTTTTAAGaaaagagaag--aaaaattctctaatcccaccacccagagc----tgatca-tgtt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 372191 128 - 4471408 AGGCTTCTTGTCTG--AT-TGGGTGATATTTTTAAAAAGAA----------AA--AATGCAGGCAGTGTAGAtttttttttttt-tttttttAAGGaaagagaag--aaaaattctgtaatcccaccacctagagc----tgatca-tgtt i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 345738 109 + 643850 AGA---------TG--ATGTAGAAGATGGTTTTAAAAGGGGTGGAGGAGAGAGAGAAAGAATGAAATGGAT--------------------------aaaaaaag-aaaatcatctataatcccaccacccagaat----caaccattgct i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e canFam3.chr1 4619926 924 - 122678785 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I a score=171050.000000 s hg38.chr19_GL383574v1_alt 81571 53 + 155864 gacactatttgggtgtatattctgtctggcattatcctgtacaggcatatgCT s panTro5.chr19 36150135 53 + 61309027 gacactatttgggtgtatattctgtctggcattgtcctgtacaggcatatgCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896321 53 + 64411610 gacactatttgggtgtatattctgtctggcattgtcctgtacaggcatatgCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313922 53 - 8369475 gacactatttgggtgtatattctgtctggcattgtcctgtacaggcatatgCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906834 53 - 106955855 aacactatttgggtgtatattctgtctggcattgttctgtacaggcatatgCT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28571157 53 + 49145316 aacacgatttgggtgtatattctgcctggcattgttctgtacaGGCACATTAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5418448 49 + 8899380 aacacgatt----tgtatattctgcctgtcattcttctgtacaGGCACATGCT i saiBol1.JH378197 C 0 I 874 s cebCap1.NW_016107633v1 1621973 53 - 2680843 aacacgatttggatgtatattctgcctggcattgttctgtacaGGCACATGCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 372319 53 - 4471408 aacacgatttgggtgtatattctgcctggcattgttctgtacaGTAGCATGCT i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 345847 52 + 643850 aatgct-ttggggtgtatattctgcctggcactgttctgcataggcatgagct i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e chlSab2.chr6 29274227 862 + 50890351 I e canFam3.chr1 4619926 924 - 122678785 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e cerAty1.NW_012005268v1 5468118 923 + 7714307 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I e macFas5.chr19 34671391 593 + 59248254 I e rheMac8.chr19 30217969 936 + 53671032 I a score=19387.000000 s hg38.chr19_GL383574v1_alt 81624 11 + 155864 CTTCAGCAAAA s panTro5.chr19 36150188 11 + 61309027 CTTCAGCAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896374 11 + 64411610 CTTCAGCAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313975 11 - 8369475 CTTCAGCAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906887 11 - 106955855 CTTCAGCAAAA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28571210 7 + 49145316 CTT----AAAA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1622026 11 - 2680843 TTTAAACAAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 372372 10 - 4471408 CTTAAG-CAAA i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 345899 11 + 643850 tttcagcaaaa i dasNov3.JH563638 C 0 I 430 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e chlSab2.chr6 29274227 862 + 50890351 I e canFam3.chr1 4619926 924 - 122678785 I e saiBol1.JH378197 5418497 874 + 8899380 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e cerAty1.NW_012005268v1 5468118 923 + 7714307 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I e macFas5.chr19 34671391 593 + 59248254 I e rheMac8.chr19 30217969 936 + 53671032 I a score=59131.000000 s hg38.chr19_GL383574v1_alt 81635 28 + 155864 ATGGATTTggccgggcgcagtggctcag- s panTro5.chr19 36150199 28 + 61309027 ATGGATTTggccgggcgcagtggctcag- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896385 28 + 64411610 ATGGATTTggccgggcgcagtggctcag- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6313986 28 - 8369475 ATGGATTTGTccgggcgcagtggctcag- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906898 28 - 106955855 ATGGAGTTggccggacgcagtggctcag- i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28571217 29 + 49145316 ATGGATTTggctgggcacagtggctcatg i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1622037 29 - 2680843 ATGGATTTggctgggcacagtggctcacg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 372382 29 - 4471408 ATGGATTTggctgggcacagtggctcagg i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e chlSab2.chr6 29274227 862 + 50890351 I e canFam3.chr1 4619926 924 - 122678785 I e saiBol1.JH378197 5418497 874 + 8899380 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e cerAty1.NW_012005268v1 5468118 923 + 7714307 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I e macFas5.chr19 34671391 593 + 59248254 I e rheMac8.chr19 30217969 936 + 53671032 I a score=296093.000000 s hg38.chr19_GL383574v1_alt 81663 119 + 155864 cctgtaatcccagcactttgggaagctgaggcaggcagatcacttga-------ggtcaggagttccag------------------------accagcctggccaacttg-atgaaa------ccccatctctgct--aaatgc----aaaaattattagct s panTro5.chr19 36150227 119 + 61309027 cctgtaatcccagcactttgggaagctgaggcaggcagatcacttga-------ggtcaggagttccag------------------------accagcctggccaacttg-atgaaa------ccccatctctact--aaatac----aaaaattattagct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896413 120 + 64411610 cctgtaatcccagcactttgggaagctgaggcaggcagatcacttga-------ggtcaggagttccag------------------------accagcctggccaacttg-atgaaa------ccccatctctact--aaatac---gaaaagttattagct i panPan2.chr19 C 0 I 64 s gorGor5.CYUI01015150v1 6314014 119 - 8369475 cctgtaatcccagcactttgggaagctgaggcaggcagatcacttga-------ggtcaggagttccag------------------------accagcctggccaacttg-atgaaa------ccccatctctact--aaatac----aaaaattattagct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63906926 125 - 106955855 cctgtaatcccagcactttgggaagctgaggcaggcagatcacttga-------ggtcaggagttccag------------------------accagcctggccaacatg-atgaagccccatccccatctctact--aaatac----aaaaattattagcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34671984 155 + 59248254 cctataaccccagctacttgggaggctgaggcaggataattgtttgaccccgggaggcagaggttgcagtgagccgagaccatgccatcacactccagcctgggtaataagaacgaaa------ctccatctcaaaa--aaaaaaaaaaaaaaaaaattggcc i macFas5.chr19 I 593 C 0 s calJac3.chr22 28571246 121 + 49145316 cctgtaatcccaacactttgggaaaccaaggtgggcagatcacttga-------ggtcaggagttccag------------------------accagcctggccaacatg-gtgaaa------ccccttctctactaaaaatac----aaaaattattagcc i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1622066 121 - 2680843 cctgtaatcccaacactttgggaaaccaaggcgggcagatcacttga-------ggtcaggagttccag------------------------accagcctggccaacgtg-gtgaaa------ccccttctctactaaaaatac----aaaaattattagcc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 372411 121 - 4471408 cctgtaatcccaacacattgggaagccaaggcgggcagatcacttga-------ggtcaggagttccag------------------------accagcctggccaacatg-gtgaaa------ccccttctctactaaaaatac----aaaagttattagcc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e chlSab2.chr6 29274227 862 + 50890351 I e canFam3.chr1 4619926 924 - 122678785 I e saiBol1.JH378197 5418497 874 + 8899380 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e cerAty1.NW_012005268v1 5468118 923 + 7714307 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I e rheMac8.chr19 30217969 936 + 53671032 I a score=71643.000000 s hg38.chr19_GL383574v1_alt 81782 34 + 155864 aggcatggtggcgggttcctgtaatcccagctac s panTro5.chr19 36150346 34 + 61309027 aggcatggtggcgggttcctgtaatcccagctac i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6314133 34 - 8369475 aggcatggtggcgggttcctgtaatcccagctac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63907051 34 - 106955855 aggcgtggtggcgggttcctgtaatcccagctac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34672139 34 + 59248254 ggctgtggtggcacgtgcctgtaatctcagctgc i macFas5.chr19 C 0 C 0 s calJac3.chr22 28571367 34 + 49145316 aggcacggtggtgggttcctgtaatcccagctac i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1622187 34 - 2680843 aggtgtggtggtgagcgcctgtaatcctagctac i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 372532 34 - 4471408 aggtctggtggtgggtgcctgtaatcccagctac i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e chlSab2.chr6 29274227 862 + 50890351 I e canFam3.chr1 4619926 924 - 122678785 I e saiBol1.JH378197 5418497 874 + 8899380 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e cerAty1.NW_012005268v1 5468118 923 + 7714307 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I e rheMac8.chr19 30217969 936 + 53671032 I e panPan2.chr19 39896533 64 + 64411610 I a score=60885.000000 s hg38.chr19_GL383574v1_alt 81816 23 + 155864 ttgggaggctgaggcaggagaat s panTro5.chr19 36150380 23 + 61309027 ttgggaggctgaggcaggagaat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896597 23 + 64411610 ttgggaggctgnggcacggngat i panPan2.chr19 I 64 C 0 s gorGor5.CYUI01015150v1 6314167 23 - 8369475 ttgggaggctgaggcaggagaat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63907085 23 - 106955855 ttgggaggctgaggcaggagaat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34672173 23 + 59248254 tcgggcaactgtggcacaagaat i macFas5.chr19 C 0 C 0 s calJac3.chr22 28571401 23 + 49145316 ttgggagcctgaggcaggagaat i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1622221 23 - 2680843 ttgggaggctgaggcaggcgaat i cebCap1.NW_016107633v1 C 0 I 946 s aotNan1.NW_018505377v1 372566 23 - 4471408 ttgggaggctgaggcaggagaat i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e chlSab2.chr6 29274227 862 + 50890351 I e canFam3.chr1 4619926 924 - 122678785 I e saiBol1.JH378197 5418497 874 + 8899380 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e cerAty1.NW_012005268v1 5468118 923 + 7714307 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I e rheMac8.chr19 30217969 936 + 53671032 I a score=149721.000000 s hg38.chr19_GL383574v1_alt 81839 99 + 155864 ttcttgaacccaggaggcagaggttgc-agtgagccaagatcgcgccattgcacttcagcctgggtgacaagag------caaaactccat--------------ctc----aaaaagaaa---------aaa s panTro5.chr19 36150403 103 + 61309027 ttcttgaacccaggaggcggaggttgc-agtgagccaagatcgcaccattgcacttcagcctgggtgacaagag------caaaactccat--------------ctc----aaaaagaaa-----aaagaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896620 101 + 64411610 tctt--gaccacggaggc-gaggtggcgagtgagcc-agatcgcaccattgcacttcagcctgggtgacaagaaagaaacaaaaactccat--------------ctc-----aaaagaaa---------aag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6314190 101 - 8369475 ttcttgaacccaggaggcggaggttgc-agtgagca-agatcgcgccattgcacttcagcctgggtgacaagag------caaaactccat--------------ctc-----aaaagaaa-----aaagaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63907108 110 - 106955855 ttcttgaacccaggaggcggaggttgc-agtgagccaagattgcgccattgcactccagcctgagtgatgag--------cgaaactccat--------------ctccaaaaaaaagaaaaaagaaaagaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34672196 98 + 59248254 cacttgaacctgggaggtagaggttgc-agtgagccaagatcacgccactgctctccagcctaggtgac-agag------caagactccat--------------ctc----aaaaaaaaa---------aga i macFas5.chr19 C 0 I 65 s calJac3.chr22 28571424 112 + 49145316 cacttgaacctgggaggcggaggttgc-agtgagctgagaccataccatcacactctagcctgggc-gtaagac------caaaactctagcctgggcagtaagactc----aaaaaaaaa---------aaa i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 372589 99 - 4471408 cacttgaacctgggaggcggaggttgc-agtgagctgagaccataccatcacactctagcctgggcagtaagag------caaaactccag--------------ctc----aaaaaaaaa---------aaa i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e chlSab2.chr6 29274227 862 + 50890351 I e canFam3.chr1 4619926 924 - 122678785 I e cebCap1.NW_016107633v1 1622244 946 - 2680843 I e saiBol1.JH378197 5418497 874 + 8899380 I e colAng1.NW_012111697v1 2339192 2060 + 4274983 I e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e cerAty1.NW_012005268v1 5468118 923 + 7714307 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I e rheMac8.chr19 30217969 936 + 53671032 I a score=5005.000000 s hg38.chr19_GL383574v1_alt 81938 1 + 155864 a s panTro5.chr19 36150506 1 + 61309027 a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896721 1 + 64411610 a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6314291 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63907218 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30218905 1 + 53671032 A i rheMac8.chr19 I 936 C 0 s macFas5.chr19 34672359 1 + 59248254 A i macFas5.chr19 I 65 C 0 s cerAty1.NW_012005268v1 5469041 1 + 7714307 A i cerAty1.NW_012005268v1 I 923 C 0 s colAng1.NW_012111697v1 2341252 1 + 4274983 A i colAng1.NW_012111697v1 I 2060 C 0 s calJac3.chr22 28571536 1 + 49145316 a i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 372688 1 - 4471408 a i aotNan1.NW_018505377v1 C 0 I 1032 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e chlSab2.chr6 29274227 862 + 50890351 I e canFam3.chr1 4619926 924 - 122678785 I e cebCap1.NW_016107633v1 1622244 946 - 2680843 I e saiBol1.JH378197 5418497 874 + 8899380 I e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I a score=94956.000000 s hg38.chr19_GL383574v1_alt 81939 32 + 155864 gaaaaGtagatgggc-acagt-ggctcat--gcctg s panTro5.chr19 36150507 32 + 61309027 gaaaaGtagacgggc-acagt-ggctcat--gcctg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896722 36 + 64411610 agaaaGTAGACGGGCGACAGTAGGCTCACTGTccag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6314292 32 - 8369475 gaaaaGtagacgggc-acagt-ggctcat--gcctg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63907219 32 - 106955855 gaaaAGTCGATgggc-acagt-ggctcac--gcctg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30218906 32 + 53671032 Gaaaagtagatggcc-acagt-ggctcac--gcctg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34672360 32 + 59248254 Gaaaagtagatggcc-acagt-ggctcac--gcctg i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5469042 32 + 7714307 Gaaaagtagatggcc-acagt-ggctcac--gcctg i cerAty1.NW_012005268v1 C 0 C 0 s colAng1.NW_012111697v1 2341253 32 + 4274983 Gaaaagtagatggcc-acagt-ggctcac--gcctg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28571537 32 + 49145316 aaaaaaaTgccaggt-acggt-ggctcac--tcctg i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e chlSab2.chr6 29274227 862 + 50890351 I e canFam3.chr1 4619926 924 - 122678785 I e aotNan1.NW_018505377v1 372689 1032 - 4471408 I e cebCap1.NW_016107633v1 1622244 946 - 2680843 I e saiBol1.JH378197 5418497 874 + 8899380 I e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I a score=274838.000000 s hg38.chr19_GL383574v1_alt 81971 60 + 155864 taa---tcccagcactttgggaggccaaagcaggaggattgcttgagcccaggaggttgaagt s panTro5.chr19 36150539 60 + 61309027 taa---tcccagcactttgggaggccaaagcaggaggattgcttgagcccaggaggttgaagt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896758 60 + 64411610 taa---tcccagcactttgggaggccaaagcaggaggattgcttgagcccaggaggttgaagt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6314324 60 - 8369475 taa---tcccagcactttgggaggccaaagcaggaggattgcttgagcccaggaggttgaagt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63907251 60 - 106955855 taa---tcccagcactttgggaggccaaggcaggaggattgcttgagcccaggaggttgaggt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30218938 60 + 53671032 taa---tcccagcactttgggaggccaaggcaggaggattgcttgagcccaggaggctgaggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34672392 60 + 59248254 taa---tcccagcactttgggaggccaaggcaggaggattgcttgagcccaggaggctgaggt i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5469074 60 + 7714307 taa---tcccagcactttgggaggccaaggcaggaggattgcttgagcccaggaggctgaggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29275089 60 + 50890351 taa---tcccagcactttgggaagccaaggcaggaggactgcttgagcccaggaggctgaggt i chlSab2.chr6 I 862 C 0 s colAng1.NW_012111697v1 2341285 60 + 4274983 taa---tcccagcactttgggaggccaaggcaggaggattgcttgagcccaggaggctgaagt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28571569 63 + 49145316 taagtggctcagcactttgggaggcttaggcaggcaaatcgcctgaagtcaggagtttaagat i calJac3.chr22 C 0 I 1256 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e canFam3.chr1 4619926 924 - 122678785 I e aotNan1.NW_018505377v1 372689 1032 - 4471408 I e cebCap1.NW_016107633v1 1622244 946 - 2680843 I e saiBol1.JH378197 5418497 874 + 8899380 I e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I a score=213239.000000 s hg38.chr19_GL383574v1_alt 82031 72 + 155864 tgcagtaagccatgaccacaccactgcactacagcctgggtgacagagtctaaaaaaaaaaaaaaaaaaaaa s panTro5.chr19 36150599 70 + 61309027 tgcagtaagccatgaccacaccactgcactacagcctgggtgac--agtctaaaaaaaaaaaaaaaaaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896818 68 + 64411610 tgcagtaagccatgaccacaccactgcactacagcctgggtgac--agtctaaaaaaaaaaaaaaaaaaT-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6314384 72 - 8369475 tgcagtaagccatgactacgccactgcactacagcctgggtgacagagtcttaaaaaaaaaaaaaaaaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63907311 61 - 106955855 tgcagtaagccatgaccacaccactgcactacagcctgggtgacagagtctaaaaaaaaaT----------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30218998 62 + 53671032 tgcagtaagccatgaccacaccactgcactgcagcctgggtgac--agtcaaaaaaaaaaaaaC-------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34672452 62 + 59248254 tgcagtaagccatgaccacaccactgcactgcagcctgggtgac--agtcaaaaaaaaaaaaaC-------- i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5469134 62 + 7714307 tgcagtaagccatgaccacaccactgcactgcagcctgggtgac--agtcaaaaaaaaaaaaaC-------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29275149 59 + 50890351 tgcagtaagccatgaccacaccactgcactgcagcctgggtgac--agtc---aaaaaaaaaaC-------- i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2341345 62 + 4274983 tgcagtaagccatgaccacaccactgcactgcagcctgggtgac--agtcaaaaaaaaaaaaaC-------- i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e canFam3.chr1 4619926 924 - 122678785 I e aotNan1.NW_018505377v1 372689 1032 - 4471408 I e cebCap1.NW_016107633v1 1622244 946 - 2680843 I e saiBol1.JH378197 5418497 874 + 8899380 I e calJac3.chr22 28571632 1256 + 49145316 I e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I a score=22948.000000 s hg38.chr19_GL383574v1_alt 82103 11 + 155864 aaaaa----TCCACA s panTro5.chr19 36150669 15 + 61309027 aaaaaaaaTTCCACA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896886 6 + 64411610 ---------TCCACA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6314456 8 - 8369475 aT-------TCCACA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63907372 6 - 106955855 ---------TCCACA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30219060 6 + 53671032 ---------TCCACA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34672514 6 + 59248254 ---------TCCACA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5469196 6 + 7714307 ---------TCCACA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29275208 6 + 50890351 ---------TCCACA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2341407 6 + 4274983 ---------TCCACA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28572888 11 + 49145316 AAAAA----TTCAGG i calJac3.chr22 I 1256 C 0 s cebCap1.NW_016107633v1 1623190 11 - 2680843 AAAAA----TCCAGG i cebCap1.NW_016107633v1 I 946 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e canFam3.chr1 4619926 924 - 122678785 I e aotNan1.NW_018505377v1 372689 1032 - 4471408 I e saiBol1.JH378197 5418497 874 + 8899380 I e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I a score=657827.000000 s hg38.chr19_GL383574v1_alt 82114 99 + 155864 TTTCTAAATGGGAAAATCTGAAGGCCTTGATCTGCTGCCAAGGGTCATTGGCTGTGTCTTTTGAAACATTTTTATTATGAAAGTGTCATGTGGTTATAG s panTro5.chr19 36150684 99 + 61309027 TTTCTAAATGGGAAAATCTGAAGGCCTTGATCTGCTGCCAAGGGTCATTGGCTGTGTCTTTTGAAACATTTTTATTATGAAAGTGTCATGTGGTTATAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896892 99 + 64411610 TTTCTAAATGGGAAAATCTGAAGGCCTTGATCTGCTGCCAAGGGTCATTGGCTGTGTCTTTTGAAACATTTTTATTATGAAAGTGTCATGTGGTTATAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6314464 99 - 8369475 TTTCTAAATGGGAAAATCTGAAGGCCTTGATCTGCTGCCAAGGGTCATTGGCTGTGTCTTTTGAAACATTTTTATTATGAAAGTGTCATGTGGTTATAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63907378 99 - 106955855 TTTCTAAGTGGGAAAATCTGAAGGCCTTGATCTGCTGCCAAAGGTCATTGGCTGTGTCTTTTGAAACATTTTTATTACGAAAGTGTCATGTGGTTATAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30219066 99 + 53671032 TCTCTAAATGGGAAAATCTgaaggtctcgatctgctgccaagggtcattggccgcgtcttttgaaacatttttatcaTGAAAGTGTCATGTGGTTATAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34672520 99 + 59248254 TCTCTAAATGGGAAAATCTGAAGGTCTCGATCTGCTGCCAAGGTTCATTGGCCGCGTCTTTTGAAACATTTTTATCATGAAAGTGTCATGTGGTTATAG i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5469202 99 + 7714307 TCTCTAAATGGGAAAATCTGAAGGTCTCGATCTGCTGCCAAGGGTCATTGGCTGCGTCTTTTGAAACATTTTTATCATGAAAGTGTCATGTGGTTATAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29275214 99 + 50890351 TCTCTAAATGGGAAAATCTGAAGGTCTCGATCTGCTGCCAAGGGTCATTGGCTGTGTCTTTTGAAACCTTTTTTTGATGAAGGTGTCATGTGGTTATAC i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2341413 99 + 4274983 TCTCTAAATGGGAAAATCTGAAGGTCTCGATCTGCTGCCAAGGGTCATTGGCTGCGTCTTTTGAAACATTTTTATTATGAAAATGTCATGTGGTTATAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28572899 97 + 49145316 TTTCTAAATGGGAAAATCTGAAGGTCTTGATCTGCTGTCAAGGGTCATTGTCTCTGTCTTTTGAAAC--TTTTATTGTGAAAGTGTCATGTGGTTATAG i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1623201 99 - 2680843 TTTCTAAATGGGAAAATCTGAACGTCTTGATCTGCTGCCAAGGGTCATTGGCTGTGTCTTTTGAAACATTTCTATTGTGAAAGTGTCATGTGGTTATAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 373721 99 - 4471408 TTTCTAAATGGGAAAATCTGAAGGTCTTGATCTGCTGCCAAGGGTCATTGGCTGTGTCTTTTGAAACATTTTTATTGTGAAAGCATCATGTGGTTATAG i aotNan1.NW_018505377v1 I 1032 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e canFam3.chr1 4619926 924 - 122678785 I e saiBol1.JH378197 5418497 874 + 8899380 I e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I a score=21715.000000 s hg38.chr19_GL383574v1_alt 82213 16 + 155864 GATATGAGCTGCTTCA s panTro5.chr19 36150783 16 + 61309027 GAAATGAGCTGCTTCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39896991 16 + 64411610 GAAATGAGCTGCTTCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6314563 16 - 8369475 GAAATGAGCTGCTTCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63907477 16 - 106955855 GAAATGAGCTGCTTCA i nomLeu3.chr10 C 0 C 0 s cebCap1.NW_016107633v1 1623300 16 - 2680843 GAAATGAGCTGCTTCA i cebCap1.NW_016107633v1 C 0 I 3664 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e chlSab2.chr6 29275313 0 + 50890351 C e canFam3.chr1 4619926 924 - 122678785 I e aotNan1.NW_018505377v1 373820 0 - 4471408 C e saiBol1.JH378197 5418497 874 + 8899380 I e calJac3.chr22 28572996 0 + 49145316 C e colAng1.NW_012111697v1 2341512 0 + 4274983 C e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e cerAty1.NW_012005268v1 5469301 0 + 7714307 C e macNem1.NW_012011689v1 4538207 1510 - 13342542 I e macFas5.chr19 34672619 0 + 59248254 C e rheMac8.chr19 30219165 0 + 53671032 C a score=260616.000000 s hg38.chr19_GL383574v1_alt 82229 297 + 155864 gcccggcacggtggctcacacctgtaatcccagcacttttggaggctgaggagggcggatcacctgaggtcgggagttcgagaccagcctgaccaacatggagaaactccatctctactaatcatacaaaattagctgggtgtggtggtgcatgcctgttatcccagctactcaggaggctgaggcaggagaatcacttgaacctgagaggtggaggttgcggtgagccgaggtcactccattgcactccagcctgggcaacaagagtgaaactccatctc----aaaaaaaaaaaaaaaa s panTro5.chr19 36150799 301 + 61309027 gcccggcacggtggctcacacctgtaatcccagcacttttggaggccgaggagggcagatcacctgaggtcgggagttcgagaccagcctgaccaacatggagaaactccatctctactaatcatacaaaattagctgggtgtggtggtgcatgcctgttatcccagctactcaggaggctgaggcaggagaatcacttgaacctgagaggtggaggttgcggtgagccgaggtcgctccattgcactccagcctgggcaacaagagtgaaactccgtctcaaaaaaaaaaaaaaaaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39897007 295 + 64411610 gcccgacacggtggctcacacctgtaatcccagcacttttggaggccgaggagggcggatcacctgaggtcgggagttcgagaccagcctgaccaacatggagaaactccatctctactaatcatacaaaattagctgggtgtggtggtgcatgcctgttatcccagctactcaggaggctgaggcaggagaatcacttgaacctgagaggtggaggttgcggtgagccgaggtcgctccattgcactctagcctgggcaacaagagtgaaactccgtctc------aaaaaaaaaaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6314579 299 - 8369475 gcccggcacggtggctcacacctgtaatccgagcacttttggaggccgaggagggcggatcacctgaggtcgggagttcgagaccagcctgaccaacatggagaaactccatctctactaatcatacaaaattagctgggtgtggtggtgcatgcctgttatcccagctactcaggaggctgaggcaggagaatcacttgaacctgagaggtggaggttgcggtgagccgaggtcgctccattgcactccagcctgggcaacaagagtgaaactccatctc--aaaaaaaaaaaaaaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63907493 291 - 106955855 gcccggcacagtggcttatacctgtaatcccagcacttttggaggccgaggcaggcggatcacctgaggttgggagttcgagaccagtctgaccaacatggagaaaccccatctctactaaaaatacaaaattagccgggtgtggtggtgcatgcctgttatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaagaggtggagggtgcggtgagccgaggtcactccattgcactccagtctcggcaacaagagtgaaactccatccc----------aaaaaaaaag i nomLeu3.chr10 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e chlSab2.chr6 29275313 0 + 50890351 C e canFam3.chr1 4619926 924 - 122678785 I e aotNan1.NW_018505377v1 373820 0 - 4471408 C e cebCap1.NW_016107633v1 1623316 3664 - 2680843 I e saiBol1.JH378197 5418497 874 + 8899380 I e calJac3.chr22 28572996 0 + 49145316 C e colAng1.NW_012111697v1 2341512 0 + 4274983 C e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e cerAty1.NW_012005268v1 5469301 0 + 7714307 C e macNem1.NW_012011689v1 4538207 1510 - 13342542 I e macFas5.chr19 34672619 0 + 59248254 C e rheMac8.chr19 30219165 0 + 53671032 C a score=437610.000000 s hg38.chr19_GL383574v1_alt 82526 102 + 155864 gaaaTGAGCTGCTTCAAACAGGTCCTCACTAAAGACCAATGACTGGCATTgcctgagcaacatagggagaccttgtttctac------------------aagttatttatttatttatt s panTro5.chr19 36151100 94 + 61309027 gaaaTGAGCTGCATCAAACAGGTCCTCACTAAAGACCAATGACTGGCATTgcctgagcaacatagggagaccttgtttctac------------------aag--------ttatttatt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39897302 102 + 64411610 gaaaTGAGCTGCTTCAAACAGGTCCTCACTAAAGACCAATGACTGGCATTgcctgagcaacatagggagaccttgtttctac------------------aagttatttatgtatttatt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6314878 85 - 8369475 gaaaTGAGCTGCTTCAAACAGGTCCTCACTAAAGACCAATGACTGGCATTgccggagcaacatagggagaccttgtttctac------------------aag----------------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63907784 102 - 106955855 gaaaTGAGCTGCTTCAAACAGGTCCTCACTAAAGACCAATGACTGGCATTGCCTGAGCAACATAGGGAGACCTTGTTTCTAC------------------AAGTTAGTTAGTTAGttatt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30219165 82 + 53671032 GAAATGAGCTGCTTCAAACAGGTCCTCACTAAAGACCAATGACTGGCATTgcctgggcaacatagggagaccttgtttctac-------------------------------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34672619 82 + 59248254 GAAATGAGCTGCTTCAAACAGGTCCTCACTAAAGACCAATGACTGGCATTgcctgggcaacatagggagaccTTGTTTCTAC-------------------------------------- i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5469301 82 + 7714307 GAAATGAGCTGCTTCAAACAGGTCCTCACTAAAGACCAATGACTGACATTgcctgggcaacatagggagaccttgtttctac-------------------------------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29275313 82 + 50890351 GAAATGAGCTGCTTCAAACAGATCCTCGCTAAAGACCAATGACTGGCATTgcctgggcaacatagggagaccttgtttctgc-------------------------------------- i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2341512 96 + 4274983 GAAATGAGCTGCTTCAAACAGGTCCTCACTAAAGACCAATGACTGGCATTGCCTGGGCAACAT----AGACCTTGTTTCTACtatttatttatttttatt-------------------- i colAng1.NW_012111697v1 C 0 I 33 s calJac3.chr22 28572996 98 + 49145316 GAAATGAGCTGCTTCAAACAGGTGCTCACTAAAGACCAGTGACTGGCATTgcctgggcaacataggaagaccttgtctctac------------------aaGTAA-CTTATTAttt--- i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 373820 99 - 4471408 GAAATGAGCTGCTTCAAACAGGTGCTCACTAAAGACCAATGACTGGCATTgcctgggcaacatagggagaccttgtctctac------------------aagtaatttttttattt--- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e canFam3.chr1 4619926 924 - 122678785 I e cebCap1.NW_016107633v1 1623316 3664 - 2680843 I e saiBol1.JH378197 5418497 874 + 8899380 I e manLeu1.NW_012102454v1 899234 1498 - 2385121 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I a score=285215.000000 s hg38.chr19_GL383574v1_alt 82628 63 + 155864 tatttatttatttatttatttatttatttatttGgagccagagtctcgctctgtcgcccaggc s panTro5.chr19 36151194 63 + 61309027 tatttatttatttatttatttatttatttatttGgagccagagtctcgctctgtcgcccaggc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39897404 63 + 64411610 tatttatttatttatttatttatttatttatttGgagccagagtcttgctctgtcgcccaggc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6314963 61 - 8369475 --tttgtttgtttgtttgtttgtttgtttatttggagccagagtctcgctctgtggcccaggc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63907886 63 - 106955855 tatttatttatttatttatttatttatttatttGGAGTCAGAGTCTCGCTCTGTCGGCCAGGC i nomLeu3.chr10 C 0 M 100 s rheMac8.chr19 30219247 62 + 53671032 tatttatttattt-tttatttatttatttatttagagacagagtcttgttctgttgcccaggc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34672701 62 + 59248254 tatttatttattt-tttatttatttatttatttagagacagagtcttgttctgttgcccaggc i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5469383 62 + 7714307 tatttatttattt-tttatttatttatttatttagagacagagtcttgttctgttgcccaggc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29275395 54 + 50890351 tatttatttattt---------tttatttatttagagacagagtcttgttctgtcgcccaggc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 900732 62 - 2385121 tatttatttattt-tttatttatttatttatttagagacagagtcttgttctgtcgcccaggc i manLeu1.NW_012102454v1 I 1498 C 0 s colAng1.NW_012111697v1 2341641 58 + 4274983 tatttatttattt--ttatttattta-ttatttagagac--agtcttgttctgtcacccaggc i colAng1.NW_012111697v1 I 33 C 0 s calJac3.chr22 28573094 44 + 49145316 -------------------tttattatttgttttgagacagagtctcactctatcacccaggc i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 373919 44 - 4471408 -------------------tttattattcgttttgtgacagagtctcagtctgtcacccaggc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e canFam3.chr1 4619926 924 - 122678785 I e cebCap1.NW_016107633v1 1623316 3664 - 2680843 I e saiBol1.JH378197 5418497 874 + 8899380 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I a score=985514.000000 s hg38.chr19_GL383574v1_alt 82691 221 + 155864 tggagtgcagtggcacgatctcggctcactgcaa--gctctgcctcccaggttcacgccattctcctgcctcagcctccc-ggcagctgggactacaggtgcccgccaccacgcccggctaattttttttatttttagtggagacggggcttcgcagtgttagccaggatggtctcgatctcctgacctca--tgatccgcccgcctcggcctcccaaagtgctgg s panTro5.chr19 36151257 221 + 61309027 tggagtgcagtggcgtgatctcggctcactgcaa--gctccgcctcccaggttcacgccattctcctgcctcagcctccc-ggcagctgggactacaggtgcctgccaccacgcctggctaattttttttatttttagtggagacggggtttcgcagtgttagccaggatggtctcgatctcctgacctca--tgatccgcccgcctcggcctccgaaagtggtgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39897467 220 + 64411610 tggagtgcagtggcgcgatctcggctcactgcaa--gctccgcctcccaggttcacgccactctcctgcctcagcctccc-ggcagctgggactacaggtgcctgccaccacgcctggctaa-tttttttatttttagtggagacggggtttcgcagtgttagccaggatggtctcgatctcctgacctca--tgatccgcccgcctcggcctccgaaagtggtgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6315024 221 - 8369475 tggagtgcagtggcgcgatcttggctcactgcaa--gctccgcctcccgggttcacgccattctcctgcctcagcctccc-ggcagctgggactacaggtgcccgccaccacgcctggctaactttttttatttttagtggagacggggttttgcagtgttagccaggatggtctcgatttcctgacccca--tgatccgcccacctcggcctcccaaagtgctgg i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30219309 210 + 53671032 tggagtgcaacggcgcgatctgggctcactgcaacctctctgccttctgggttcaagcgattcgcctgcctctgcctcccaagtaactgggattacaggcatccgccaccgtgcctggctaa-tttttgtatttttagtaga---------------tgttggccagactgttctcgaactcccaacctcaggtgatccaccctcctcggcctcccaaagtactgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34672763 210 + 59248254 tggagtgcaacggcgcgatctgggctcactgcaacctctctgccttctgggttcaagcgattctcctgcctctgcctcccaagtaactgggattacaggcatccgccaccgtgcctggctaa-tttttgtatttttagtaga---------------tgttggccagactgttctcgaactcccaacctcaggtgatccaccctcctcggcctcccaatgtactgg i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5469445 210 + 7714307 tggagtgcaacggcgtgatctgggctcactgcaacctctctgccttctgagttcaagcgattctcctgcctctgcctcccaagtaactgggattacaggcatccgccaccgtgcctggctaa-tttttgtatttttagtaga---------------tgttggccagactgttctcgaactcccaacctcaggtgatccaccctcctcggcatcccaaagtactgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29275449 210 + 50890351 tggagtgcaacggcgcgatctgggctcactgcaacctctctgccttctgggttcaagcaattctcctgcctctgcctcccaagtaactgggattacaggcacccaccaccgtgcctggctaa-tttttgtatttttagtaga---------------tgttggccagactgttctcgaactcccaacctcaggtgatccaccctcctcggcctcccaaagtactgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 900794 210 - 2385121 tggagtgcaacggcgcgatctgggctcactgcaacctctctgccttctgagttcaagcgattctcctgcctctgcctcccaagtaactgggattacaggcatccgccaccgtgcctggctaa-tttttgtatttttagtaga---------------tgttggccaggctgttctcgaactcccaacctcaggtgatccaccctcctcggcctcccaaagtactgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2341699 210 + 4274983 tggagtgcaacggcacgatctgggctcactgcaacctctccgccttctgggttcaagcgattctcctgcctctgcctcccaagtaactgggattacaggcatctgccaccgtgcctggctaa-tttttctatttttagtaga---------------tgttggccagactgttctcgaactcccgacctcaggtgatccaccctcctcggcctcccaaagtgctgg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28573138 207 + 49145316 tagagtgcaa-gatgcggtctcggctcactgcca--cctctgcctcctgggttcaagcaattctcctgcctcaacctcctgagtagctgggacttcagacatgtgccaccacgcctggctaa-tttttgtatttttagtaga---------------tgttggcaaggctgttctcgaactcctggcctcaggtgatccaccctcctcggcctcccaaagtgctag i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 373963 207 - 4471408 tggagtgcaa-ggtgtggtctcagctcactgcaa--cctctgcctcctgggttcaggcaattctcctgcctcagcctcctgagtagctgggaatacaggcacgcgccaccacgcctggctaa-tttttgtatttttagtaga---------------tgttggccaggccgttctcgaattcctgacctcaggtgatccaccctcctcggcctcccaaagtgctgg i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e canFam3.chr1 4619926 924 - 122678785 I e cebCap1.NW_016107633v1 1623316 3664 - 2680843 I e saiBol1.JH378197 5418497 874 + 8899380 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I e nomLeu3.chr10 63907949 100 - 106955855 M a score=143376.000000 s hg38.chr19_GL383574v1_alt 82912 23 + 155864 gattacaggcgtgagccaccgca s panTro5.chr19 36151478 23 + 61309027 gattacaggcgtgagccaccgca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39897687 23 + 64411610 gattacaggcgtgagccaccgca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6315245 23 - 8369475 gattacaggcgtgagccaccgcg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908049 23 - 106955855 GATTACAGGCGTGAGCCAGCACA i nomLeu3.chr10 M 100 C 0 s rheMac8.chr19 30219519 23 + 53671032 gattacaggcgtgagccaccacg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34672973 23 + 59248254 gattacaggcgtgagccaccatg i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5469655 23 + 7714307 gattacaggcgtgagccaccacg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29275659 23 + 50890351 gattacaggcgtgagccaccatg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901004 23 - 2385121 gattacaggcgtgagccaccacg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2341909 23 + 4274983 gattacaggtgtgagccaccacg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28573345 22 + 49145316 gattataggtgtaagcca-cgca i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 374170 23 - 4471408 gattacaggcgtaagccaccgca i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e canFam3.chr1 4619926 924 - 122678785 I e cebCap1.NW_016107633v1 1623316 3664 - 2680843 I e saiBol1.JH378197 5418497 874 + 8899380 I e macNem1.NW_012011689v1 4538207 1510 - 13342542 I a score=1327510.000000 s hg38.chr19_GL383574v1_alt 82935 185 + 155864 cccggcctatccaagtaattttttaaaaattagctgggcgtggtggcgcgtgcctgtagtcccaactac-ttgggaggctgaagcgggaggatcacttgagcccaggaggttgag------gttgcagt-aagccatgaccacaccactgcactccaacctgggcaacagagcaagaccctgtctccaaaaga s panTro5.chr19 36151501 185 + 61309027 ctcggcctatccaagtaattttttaaaaattagctgggcgtggtggcgcgtgcctgtagtcccaactac-ttgggaggctgaagcgggaggatcacttgagcccaggaggttgag------gttgcagt-aagccatgaccacaccactgtactccaacctgggcaacagagcaagaccctgtctccaaaaga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39897710 185 + 64411610 ctcggcctatccaagtaattttttaaaaattagctgggcgtggtggcgcgtgcctgtagtcccaactac-ttgggaggctgaagcgggaggatcacttgagcccaggaggttgag------gttgcagt-aagccatgaccacaccactgtactccaacctgggcaacagagcaagaccctgtctccaaaaga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6315268 185 - 8369475 cccggcctatacaagtaattttttaaaaattagctgggcgtggtggcacgtgcctgtagtcccaactac-ttgggaggctgaagcgggaggatcacttgagcccaggaggttgag------gttgcagt-aagccatgaccacaccaccgcactccaacctgggcaacagagcaagaccctgtctccaaaaga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908072 191 - 106955855 CCCAGCCTATACAAGTAATTTTTTaaaaattagctgggcgtggtggtgcgtgcctgtagtcgcagctac-ttgggaggctgaagcaggaggatcacttgagcccaagaggttgaggttgcagttgcagt-aagccatgaccacaccactgcactccagcctgggcaacagagcaagaccctgtctccaaaaga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30219542 183 + 53671032 cccggcctgtgcaagtaattttttaaaaattagctgggtgtagtggtgcatgcctgtagtcccagctgc-ttgggaggctgaagcaggaggatcacttgag-ccaggaggttgag------gttgcagt-aagccctgaccacaccactgcactccagcctgggcaacagagcaagaccctgtctccaaaag- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34672996 184 + 59248254 cccggcctgtgcaagtaattttttaaaaattagctgggtgtagtggtgcatgcctgtagtcccagctgc-ttgggaggctgaagcaggaggatcacttgag-ccaggaggttgag------gttgcagtaaagccctgaccacaccactgcactccagcctgggcaacagagcaagaccctgtctccaaaag- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4539717 183 - 13342542 ccCGGCCTGTGCAAGTAATTTTTTaaaaattagctgggtgtagtggtgcatgcctgtagtcccagctgc-ttgggaggctgaagcaggaggatcacttgag-ccaggaggttgag------gttgcagt-aagccctgaccacaccactgcactccagcctgggcaacagagcaagaccctgtctccaaaag- i macNem1.NW_012011689v1 I 1510 C 0 s cerAty1.NW_012005268v1 5469678 183 + 7714307 cgcggcctgtgcaagtaatttttttaaaattagctgggtgtagtggtgcatgcctgtagtcccagctac-ttgggaggctgaagcaggaggatcacttgag-ctgggaggttgag------gttgcagt-aagccctgaccacaccactgcactccagcctgggcaacagagcaagaccctgtctccaaaag- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29275682 182 + 50890351 -ccggcctgtgcaagtaatttttttaaaattagctgggtgtagtggtgcatgcctgtagtcccagctgc-ttgggaggctgaagcaggaggatcacttgag-ccaggaggttgag------gttgcagt-aagccatgaccacaccactgcactccagcctgggcaacagagcaagaccctgtctccaaaag- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901027 183 - 2385121 cccggccTGTGCAAGTAATTTTTTaaaaattagctgggtgtagtggtgcatgcctgtagtcccagctac-ttgggaggctgaagcacgaggatcacttgag-ccaggaggttgag------gttgcagt-aagccctgaccacaccactgcactctagcctgggcaacagagcaagaccctgtctccaaaag- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2341932 183 + 4274983 cccggcctgtgcaagtaattttttaaaaattagctgggtgtagtggtgcatgcctgtagtcccagctac-ttgggaggctgaagcaggaggatcacttgag-ccaggaggttgag------gttgcagt-aagccatgaccacaccactgcactccagcctgggcaacagagcaagactctgtctccaaaag- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28573367 176 + 49145316 cccAAtctctacaagtaattttttaaaaattagctgggcatagtggtgcatgcctgtggtcccagctactttgggagactgaagcaagagg--tgcttgaccccaagaggttgag------attgctgt-aagccattatcacaccactgcactccagcct--------gagcaagaccctgtctccagaaga i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 374193 176 - 4471408 cccaatctctacaagtaatttttttaaaattagctgggcatagtggtgcatgcctgtagtcccagctactttgggaagctgaagcaagagg--cgcttgagcccaagaggttgag------attgctgt-aagccattaccacaccactgcactccagcct--------gagcaagaccctgtctccaaaaga i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e canFam3.chr1 4619926 924 - 122678785 I e cebCap1.NW_016107633v1 1623316 3664 - 2680843 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=396692.000000 s hg38.chr19_GL383574v1_alt 83120 52 + 155864 aaaa---aagaaaaGTACACATCATAATTacctatgtaaccggcacccagattat s panTro5.chr19 36151686 52 + 61309027 aaaa---aagaaaaGTACACATCATAATTacctatgtaaccggcacccagattat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39897895 52 + 64411610 aaaa---aagaaaaGTACACATCATAATTacctatgtaaccggcacccagattat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6315453 55 - 8369475 aaaaaagaagaaaaGTACACATCATAATTacctatgtaaccggcacccagattat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908263 52 - 106955855 aaaa---aagaaaaGTACACATCATAATTacctatgtaaccagcacccagattat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30219725 48 + 53671032 -------aagaaaaGCACACATCATAATTacctatgtaaccagcacccaggttat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34673180 48 + 59248254 -------aagaaaaGCACACATCATAATTacctatgtaaccagcacccaggttat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4539900 48 - 13342542 -------aagaaaaGCACACATCATAATTacctatgtaaccagcacccaggttat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5469861 48 + 7714307 -------aagaaaaGCACACATCATAATTacctatgtaaccagcacccaggttat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29275864 48 + 50890351 -------aagaaaaGCACACATCATAATTacctatgtaaccagcacccaggttat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901210 48 - 2385121 -------aagaaaaGCACACATCATAATTacctatgtaaccagcacccaggttat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342115 48 + 4274983 -------aagaaaaGCACACATCATAATTacctatgtaaccagcacccaggttat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28573543 55 + 49145316 aaaaaagaagaaaaGTACACATCATAATTacctatgtaaccagcacccagattag i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 374369 55 - 4471408 aaaaaagaagaaaaGTACACATCATAATTacctatgtaaccagcacccatattag i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4620850 41 - 122678785 AATA---CAGAAAAGTA-----CGTAAT------tgtaaacagcacccagtttgg i canFam3.chr1 I 924 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e cebCap1.NW_016107633v1 1623316 3664 - 2680843 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=9090.000000 s hg38.chr19_GL383574v1_alt 83172 1 + 155864 a s panTro5.chr19 36151738 1 + 61309027 a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39897947 1 + 64411610 a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6315508 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908315 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30219773 1 + 53671032 a i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34673228 1 + 59248254 a i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4539948 1 - 13342542 a i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5469909 1 + 7714307 a i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29275912 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901258 1 - 2385121 a i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342163 1 + 4274983 a i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28573598 1 + 49145316 a i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1626980 1 - 2680843 a i cebCap1.NW_016107633v1 I 3664 C 0 s aotNan1.NW_018505377v1 374424 1 - 4471408 a i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4620891 1 - 122678785 g i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e dasNov3.JH563638 345910 430 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=1023849.000000 s hg38.chr19_GL383574v1_alt 83173 101 + 155864 aatcagattattaacagtaccccagaaacccacca--------agctcccttccagtagtccc-catcccttcaaggctaactacagtcctgacttctgacaccatagat s panTro5.chr19 36151739 101 + 61309027 aatcagattattaacagtaccccagaaacccacca--------agctcccttccagtagtccc-catcccttcaaagctaactacagtcctgacttctgacaccatagat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39897948 101 + 64411610 aatcagattattaacagtaccccagaaacccacca--------agctcccttccagtagtccc-catcccttcaaggctaactacagtcctgacttctgacaccatagat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6315509 101 - 8369475 aatcagattattaacagtaccccagaaacccacca--------agctcccttccagtagtccc-catcccttcaaggctaactgcagtcctgacttctgacaccacagat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908316 101 - 106955855 aatcagattattaacagcaccccagaaacccacca--------agctcccttccagtagtccc-cattccttcaaggctaactacagtcctgacttctgacaccatagat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30219774 101 + 53671032 aatcagattattaacagtaccccagaaagccacca--------gactcccttccagtagtccc-catcccttcaaggcaaactacaatcctgacttctgacaccatagat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34673229 101 + 59248254 aatcagattattaacagtaccccagaaagccacca--------gactcccttccagtagtccc-catcccttcaaggcaaactacaatcctgacttctgacaccatagat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4539949 101 - 13342542 aatcagattattaacagtaccccagaaagccacca--------gactcccttccagtagtccc-catcccttcaaggcaaactacaatcctgacttctgacaccatagat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5469910 101 + 7714307 aatcagattattaacagtaccccagaaagccacca--------gactcccttccagtagtccc-catcccttcaaagcaaactacaatcctgacttctgacaccatagat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29275913 101 + 50890351 aatcagattattaacagtaccccagaaagccacca--------gaatcccttccagtagtccc-catcccgtcaaggcaaactacaatcctgacttctgacaccatagat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901259 101 - 2385121 aatcagattattaacagtaccccagaaagccacca--------gactcccttccagtagtccc-catcccttcaaggcaaactacaatcctgacttctgacaccgtagat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342164 101 + 4274983 aatcagattattaacagtaccccagaaagccacca--------agctcctttccaatagtccc-catcccttcaaggcaaactacaatcctgacttccgacaccatagat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28573599 101 + 49145316 aatcagattattaacagtaccccagcaacccaaca--------agctcccttccagtagcccc-catcccttctaggctaactacaatcctgacttttgacagcatagaa i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1626981 101 - 2680843 aatcagattattaacagtaccccagcaacccaaca--------agctcccttccagtaacccc-catctcttcaaggctaactacaatcctgacttttgacagcatagat i cebCap1.NW_016107633v1 C 0 I 20 s aotNan1.NW_018505377v1 374425 101 - 4471408 aatcagattattaacagtaccccagcaacccaaca--------agctcccttccagtagcccc-catcccttcaaggctaactacaatcctgacttttgacagcatagat i aotNan1.NW_018505377v1 C 0 I 20 s canFam3.chr1 4620892 109 - 122678785 attgagagcattaacagtaccccagaaaccccacacgca-cgcaactcccttccagtagccccttgcctcttaaggggtaactactatactggcttctaaaagcacagat i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 346340 106 + 643850 aattagaatattaacagtacctcagatcacctccatacagcctagctcccttccaggagtccc-ccacc---aaagagtaaacactatgctgacttctaacagtatagat i dasNov3.JH563638 I 430 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=132442.000000 s hg38.chr19_GL383574v1_alt 83274 16 + 155864 tacctttg---gtgtt-----ttt s panTro5.chr19 36151840 21 + 61309027 tgcctttg---gtgttttttcttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898049 21 + 64411610 tgcctttg---gtgttttttcttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6315610 21 - 8369475 tgcctttg---gtgttttttcttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908417 21 - 106955855 tgcctttg---gtgttttttcttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30219875 21 + 53671032 tgcctttg---gtgttttttcttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34673330 21 + 59248254 tgcctttg---gtgttttttcttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540050 21 - 13342542 tgcctttg---gtgttttttcttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470011 21 + 7714307 tgcctttg---gtgttttttcttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276014 21 + 50890351 tgcctttg---gtgttttttcttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901360 21 - 2385121 tgcctttg---gtgtgttttcttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342265 21 + 4274983 tgcttttg---gtgttttttcttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28573700 15 + 49145316 -ggatttg---gtgttatt----- i calJac3.chr22 C 0 I 5 s canFam3.chr1 4621001 21 - 122678785 ggcttttg---ctttcttttgttt i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 346446 24 + 643850 tgcttttacttgtttttgttcttt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e aotNan1.NW_018505377v1 374526 20 - 4471408 I e cebCap1.NW_016107633v1 1627082 20 - 2680843 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=12376.000000 s hg38.chr19_GL383574v1_alt 83290 1 + 155864 a s panTro5.chr19 36151861 1 + 61309027 a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898070 1 + 64411610 a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6315631 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908438 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30219896 1 + 53671032 a i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34673351 1 + 59248254 a i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540071 1 - 13342542 a i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470032 1 + 7714307 a i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276035 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901381 1 - 2385121 a i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342286 1 + 4274983 a i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28573720 1 + 49145316 a i calJac3.chr22 I 5 C 0 s cebCap1.NW_016107633v1 1627102 1 - 2680843 a i cebCap1.NW_016107633v1 I 20 C 0 s aotNan1.NW_018505377v1 374546 1 - 4471408 a i aotNan1.NW_018505377v1 I 20 C 0 s canFam3.chr1 4621025 1 - 122678785 a i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 346470 1 + 643850 a i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 585378 533 + 2501019 I e micMur3.chr22 3969028 484 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=3198797.000000 s hg38.chr19_GL383574v1_alt 83291 269 + 155864 tataaatggaattacacagtatatactc---ttgtgtttggcctctctactcagcattgtgtt--tgggattcatctctcttgttgcatttggccatggactg-ttcattttcattgcagtataatattccattgtgttaatagaccacagttgcttctttctactgttgatgccgcatttgggtggtttctagcttctggctattaa-------------------aataatgctggtaCTGTTTTTTCCT-TCGGGAGAGAAGCCAGAACTAGAGTGGGTGAGAGGAATGCTG s panTro5.chr19 36151862 269 + 61309027 tataaatggaattgcacagtatatactc---ttgtgtttggcctctttactcagcattgtgtt--tgggattcatctctcttgttgcatttggccatggactg-ttcattttcattgcagtataatattccattgtgttaatagaccacagttgcttctttctaccgttgatgccgcatttgggtggtttctagcttctggctattaa-------------------aataatgctggtaCTGTTTTTTCCT-TCGGGAGAGAAGCCAGAACTAGAGTGGGTGAGAGGAATGCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898071 269 + 64411610 tataaatggaattgcacagtatatactc---ttgtgtttggcctctttactcagcattgtgtt--tgggattcatctctcttgttgcatttggccatggactg-ttcattttcattgcagtataatattccattgtgttaatagaccacagttgcttctttctaccgttgatgccgcatttgggtggtttctagcttctggctattaa-------------------aataatgctggtaCTGTTTTTTCCT-TCGGGAGAGAAGCCAGAACTAGAGTGGGTGAGAGGAATGCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6315632 271 - 8369475 tataaatggaattacacggtatatactc---ttgtgtttggcctctttactcagcattgtgtttgtgggattcatctctcttgttgcatttggccacggactg-ttcattttcattgcagtataatattccattgtgttaatagaccacagttgcttctttctactgttgatgccgcatttgggtggtttctagcttctggctattaa-------------------aataatgctggtaCTGTTTTTTCCT-TCGGGAGAGAAGCCAGAACTAGAGTGGGTGAGAGGAATGCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908439 271 - 106955855 tataaatggaattatacagtatatcctc---ttgtgtttggcctctttactcagcattgtgtttgtgggattcatctctcttgttgcatttggctgcagactg-ttcattttcattgcagtataatattccattgtgttaatagaccacagttgcttctttctactgttgatgccacatttgggtggtttctagcttctggctattaa-------------------aataatgctggtaCTGTTTTTTCCT-TTGGGAGAGAAGCCAGAACTAGAATGGATGAGAGGAATGCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30219897 266 + 53671032 tataaacggaattacacagtatatactc---ttgtgtttggcctctt-----agcgttgtgtttgtgggattcatctctcttgttgcatttggctgtggactg-ttcattttcattacagtataatattccattgtgttaatagaccacagttgcttctttctactgttgatgccgtattggggtggtttctagcttctggctattaa-------------------aataatgctggtaCTGTTTTTTCCT-TCGGGAGAGAAGCCAGAACTAGAGTGGGTGAGAGGAATGCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34673352 266 + 59248254 tataaacggaattacacagtatatactc---ttgtgtttggcctctt-----agcattgtgtttgtgggattcatctctcttgttgcatttggctgtggactg-ttcattttcattacagtataatattccattgtgttaatagaccacagttgcttctttctactgttgatgccgtatttgggtggtttctagcttctggctattaa-------------------aataatgctggtaCTGTTTTTTCCT-TCGGGAGAGAAGCCAGAACTAGAGTGGGTGAGAGGAATGCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540072 266 - 13342542 tataaacggaattacacagtatatactc---ttgtgtttggcctctt-----agcattgtgtttgtgggattcatctctcttgttgcatttggctgtggactg-ttcattttcattacagtataatattccattgtgttaatagaccacagttgcttctttctactgttgatgccgtatttgggtggtttctagcttctggctattaa-------------------aataatgctggtaCTGTTTTTTCCT-TCGGGAGAGAAGCCAGAACTAGAGTGGGTGAGAGGAATGCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470033 271 + 7714307 tataaacggaattacacagtatatactc---ttgtgtttggcctctttactcagcattgtgtttgtgggattcatctctcttgttgcatttggctgtgggctg-ttcattttcattacagtataatattccattgtgttaacagaccacagttgcttctttctactgttgatgccgtatttgggtggtttctagcttctggctattaa-------------------aataatgctggtaCTGTTCTTTCCT-TCGGGAGAGAAGCCAGAACTAGAGTGGGTGAGAGGAATGCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276036 271 + 50890351 tataaacagagttacacagtatatactc---ttgtgtttggcctctttactcagcattgtgtttgtgggattcatctctcttgttgcatttggctgtggactg-ttcattttcattacagtataatattccattgtgttaatagaccacagttgcttctttctactgttgatgccgtatttgggtggtttctagcttctggctattaa-------------------aataatgctggtaCTATTTTTTCCT-TCGGGAGAGAAGACAGAACTAGAGTGGGTGAGAGGAATGCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901382 271 - 2385121 tataaacggaattacacagtatatactc---ttgtgtttggcctctttactcagcattgtgtttgtgggattcatctctcttgttgcatttggctgtggactg-ttcattttcattacagtataatattccattgtgttaatagaccacagttgcttctttctactgttgatgccgtatttgggtggtttctagcttctggctattaa-------------------aataatgctggtaCTGTTCTTTCCT-TCGGGAGAGAAGCCAGAACTAGAGTGGGTGAGAGGAATGCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342287 271 + 4274983 tataaacggaattacacagtatatactc---ttgtgtttggcctctttactcagcattgtgtttgtgggattcatctctcttgttgcatttggctgtggactg-ttcattttcattacagtataatattccattgtgttaatagaccacagttgcttctttctactgttgatgccgtatttgggtggtttctagcttctggctattaa-------------------aagaatgctggtaCTGTTTTTTGCT-TCGGGAGAGAAGCCAGAACTAGAGTGGGTGAGAGGAATGCTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28573721 270 + 49145316 tataaatggaattacacagcatatactc---ttgtgtttggcctctttactccacgttgtgtttgtgggattcatctttattgttgcatttggctgtggactg-ttcattttcattgcagtctaatattccattgtgttaatagaccacagttgctgctttctactgttaatgccatatttgggtggtttctagcttcctgctattaa-------------------aataatactggtaCTGTT-TTTCTT-CTGGGAGAGAAGCCAGAACTAGAATGGGTAAGAGGAATGCTG i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1627103 269 - 2680843 tataaatggaattacacaccatatactc---ttgtatttggcctctttactccatgttgtgtttgttggattcatctatattgttgcatttggctgtggactg-ttcattttcattgcagtctaatattccattgggttaatagaccacagttgctgctttctactgttaatgccgcatttgggtggtttcta-cttcctgctattaa-------------------aataatgctggtaCTGTT-TTTCCT-TTGGGAGAGATGCCAGAACTAGAATGGATAAGAGGAATGCTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 374547 270 - 4471408 tataaatggaattacacagcatatactc---ttgtgtttggcctctttactccacgttgtgtttgtgggattcatctatattgttgcatttggctgtggactg-ttcattttcattgcagtctaatattccattgtgttaatagaccacagttgctgctttctactgttaatgccgcatttgggtggtttctagcttcctgctattaa-------------------aataatgccggtaCTCTT-TTTCCT-TTGGGAGAGAAGCCAGAACTAGAATGAGTAAGAGGAATGCTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3969512 271 - 30143674 tataaatacaattatgcaatatatactc---ctgtgcttggtttctttgctcagcatcgtgtttgtgggattcatctatattgctgcatttggctgtggactgttttgttttcgttgcagtgtaatattccattgtgttaccagaccacactttactcattctactgttgatgcctcatttgggtagtttctggcttttggctatt-a-------------------aataatgctgGCACTTTTTTCTCCT-TCATAAGAGAAGCCAAAACTGGAGTGGGTCAGAGGAGTGCTG i micMur3.chr22 I 484 I 176 s proCoq1.NW_012149263v1 585911 268 + 2501019 tataaatggaattatgcaatacatactc---ctgtgcttggcttccttgctcagcgtcgtgtttgtgggattcatctacgttgctgcatttggctgtggactg-ttcattttcgttgcagtgcagtgttccactgtgttcctagaccacggtttattcattccactgttgatgcctcatttgggtagtttctagcttttggctact-a-------------------aataatgctgGCACTTTTT--TCCT-TCGTAAGAGAAGCCAAAACTAGAGTGGGTGAGAGGAGCGCTG i proCoq1.NW_012149263v1 I 533 C 0 s canFam3.chr1 4621026 257 - 122678785 tataaattgatttatagagtatatactccttttgtgcttag---ctttgttcagcatgg------tgggattaatacatagtgttgcacttggctgtgaactg-tt-------attgcaacacaatattccattgtgttaatagaggacagtttagccattctac-attgatgctgcatttaggtaatttctaccttttggctgtcag-------------------aataatgctAGCGCTGTTCTTTCTT-TTCCAAGAAAAGCCGGAGCCGGAGTAGGTGAGCAGAGCACTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 346471 196 + 643850 cttaaataga-ttatatagtatatattc--tttgtgtctggcttct------------------------------------------------------------------------------------cattgtatggatagaccacaatccat-----------ttaaatgagcacttgggtagtttctagcttttggctattaaaagttatgttggtaaaaacaACAATGCTAGTGCTGTTTTATCTTCCCAAGAAGGAAGCCAGAGCTCAGGTGGGTGAAAGGA-CACTG i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=288566.000000 s hg38.chr19_GL383574v1_alt 83560 27 + 155864 ACCTAGCCCTCTTGAGGACTTGG--AGCA s panTro5.chr19 36152131 27 + 61309027 ACCTAGCCCTCTTGAGGACTTGG--AGCG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898340 27 + 64411610 ACCTAGCCCTCTTGAGGACTTGG--AGCG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6315903 27 - 8369475 ACCTAGCCCTCTTGAGGACTTGG--AGCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908710 27 - 106955855 ACCTAGCCCTCTTGAGGACTTGG--AGCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30220163 27 + 53671032 ACCTAGCCCTCTTGAGGACTTGG--AGCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34673618 27 + 59248254 ACCTAGCCCTCTTGAGGACTTGG--AGCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540338 27 - 13342542 ACCTAGCCCTCTTGAGGACTTGG--AGCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470304 27 + 7714307 ACCTAGCCCTCTTGAGGACTTGG--AGCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276307 27 + 50890351 ACCTAACCCTCTTGAGGACTTGG--AGCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901653 27 - 2385121 ACCTAGCCCTCTTGAGGACTTGG--AGCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342558 27 + 4274983 ACCTAGCCCTCTTGAGGACTTGG--AGCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28573991 27 + 49145316 ACTTAATCCTCTGGAGGACTTGC--GGCA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1627372 27 - 2680843 ACTTAATCCTCTGGAGGACTTGC--AGCA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 374817 27 - 4471408 ACTTAATCCTCTGGAGGACTTGC--AGCA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 586179 27 + 2501019 ACTTCGACCTCTTGAGGACCTGC--AGCA i proCoq1.NW_012149263v1 C 0 I 68 s canFam3.chr1 4621283 27 - 122678785 ATTCACACCTCTTGAGGACTTAG--GGTA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 346667 22 + 643850 ACTTA-------TGAGGACTTAAACAGCA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3969783 176 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=249957.000000 s hg38.chr19_GL383574v1_alt 83587 31 + 155864 TGGTGAACCATATGGTAGTGCTCTGCT----------------------TGTC------------------ s panTro5.chr19 36152158 31 + 61309027 TGGTGAACCATATGGTAGTGCCCTGCT----------------------TGTC------------------ i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898367 31 + 64411610 TGGTGAACCATATGGTAGTGCCCTGCT----------------------TGTC------------------ i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6315930 31 - 8369475 TGGTGAACCATATGGTAGTGCCCTGCT----------------------TGTC------------------ i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908737 31 - 106955855 TGGTGAACCATATGGTAGTGCCCTGCT----------------------TGTC------------------ i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30220190 31 + 53671032 TAGTGAACCATATGGTAGTGCCCCGCT----------------------TGTC------------------ i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34673645 31 + 59248254 TAGTGAACCGTATGGTAGTGCCCCGCT----------------------TGTC------------------ i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540365 31 - 13342542 TAGTGAACCGTATGGTAGTGCCCCGCT----------------------TGTC------------------ i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470331 31 + 7714307 TGGTGAACCATATGGTAGTGCCCTGCT----------------------TGTC------------------ i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276334 31 + 50890351 TGGTGAACCGTATGGTAGTGCCCCGCT----------------------TGTC------------------ i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901680 31 - 2385121 TGGTGAACCATATGGTAGTGCCCTGCT----------------------TGTC------------------ i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342585 31 + 4274983 TAGTGAACCATATGGTAGTGCCCCACT----------------------TGTC------------------ i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28574018 31 + 49145316 TGGTGAATCACATGGTAGTGTCCTGCA----------------------TGTC------------------ i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1627399 31 - 2680843 TGGTGAATCACACGGTAGCGTCCTGCG----------------------TGTC------------------ i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 374844 31 - 4471408 TGGTGAATCACATGGTAGTGTCCTGCG----------------------TGTC------------------ i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4621310 44 - 122678785 TGGTG---TGGATGGCAGTGCTCAGCTCT-----GCGCTCCA-CACCAGCGTC------------------ i canFam3.chr1 C 0 I 12 s dasNov3.JH563638 346689 69 + 643850 TGGTGAA--ATATGGCAGTGCCCAGCTATTTATAGTACTGCACCGCTGGTGTGTGCTGCAAGTAATTTGTA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 586206 68 + 2501019 I e micMur3.chr22 3969783 176 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=368598.000000 s hg38.chr19_GL383574v1_alt 83618 32 + 155864 ACTAACCATAAAGTACCATACAACCCTGATGT s panTro5.chr19 36152189 32 + 61309027 ACTAACCATAAAGTACCATACAACCCTGATGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898398 32 + 64411610 ACTAACCATAAAGTACCATACAACCCTGATGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6315961 32 - 8369475 ACTAACCATAAAGTACCATACAACCCTGATGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908768 32 - 106955855 ACTAACCATAAAGTAGCAGAAAACCCTGATGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30220221 32 + 53671032 ACTAACCATAAAGTACCATAAAACCCTTATGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34673676 32 + 59248254 ACTAACCATAAAGTACCATAAAACCCTTATGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540396 32 - 13342542 ACTAACCATAAAGTACCATAAAACCCTTATGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470362 32 + 7714307 ACTAACCATAAAGTACCATAAAACCCTTATGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276365 32 + 50890351 ACTAACCATAAAGTACCATAAAACCCTTATGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901711 32 - 2385121 ACTAACCATAAAGTACCATAAAACCCTTATGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342616 32 + 4274983 ACTAACGATAAAGTACCATAAAACGCTTATGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28574049 32 + 49145316 ACCAACAATAAAGTACCATAAAACCCTGATGC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1627430 32 - 2680843 ACTAATAATAAAGTACCATAAAACCCTGATGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 374875 32 - 4471408 ACTAACAATAAAGTACCATAAAACCCTGATGC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 586274 32 + 2501019 ACTAACCGTAAAGTGCCACAAAACCCTGATGT i proCoq1.NW_012149263v1 I 68 C 0 s canFam3.chr1 4621366 32 - 122678785 ACTGACCACAAAGTACTAGAAAACCCTGATGT i canFam3.chr1 I 12 I 193 s dasNov3.JH563638 346758 32 + 643850 ACTAGCCATAAAGTAAAAGTAAACCCTGATGT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3969783 176 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=931602.000000 s hg38.chr19_GL383574v1_alt 83650 97 + 155864 ACAGTAGAC-ATAGATGTAGAT--------AATGGTATATATTAGAGCAGATCCAGAGTCAATCCT-CC---GTGTGCCTAGCCTCAGTCCC-CTAAGGACAGTGCTCCCC s panTro5.chr19 36152221 97 + 61309027 ACAGTAGAC-ATAGATGTAGAT--------AATGGTATATATCAGAGCAGATCCAGAGTCAATCCT-CC---GTGTGCCTAGCCTCTGTCCC-CTAAGGACAGTGCTCCCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898430 97 + 64411610 ACAGTAGAC-ATAGATGTAGAT--------AATGGTATATATCAGAGCAGATCCAGAGTCAATCCT-CC---GTGTGCCTAGCCTCTGTCCC-CTAAGGACAGTGCTCCCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6315993 97 - 8369475 ACAGTAGAC-ATAGATGTAGAT--------AATGGTATATATTAGAGCAGAGCCAGAGTCAATCCT-CC---GTGTGCCTAGCCTCTGTCCC-CTAAGGACAGTGTTCCCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908800 97 - 106955855 ACGGTAGAC-ATAGATGTAGAT--------AATGGTATATATTAGAGCAGATCCAGAGTTAATCCT-CC---GTGTGCCTAGCCTCTGTCCC-CTAAGGACACTGctcccc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30220253 96 + 53671032 ACGGTAGAC-ATAGATGTAGAT--------AACCGTATATATTAGAGCAGATCCAGAGTTAATCCT-CC---GTGTGcctag-ctctgtccc-ctaaggacactgctcccc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34673708 96 + 59248254 ACGGTAGAC-ATAGATGTAGAT--------AACCGTATATATTAGAGCAGATCCAGAGTTAATCCT-CC---GTGTGCCTAG-CTCTGTCCC-CTAAGGACACTGCTCCCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540428 96 - 13342542 ACGGTAGAC-ATAGATGTAGAT--------AACCGTATCTATTAGAGCAGATCCAGAGTTAATCCT-CC---GTGTGcctag-ctctgtccc-ctaaggacactgctcccc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470394 96 + 7714307 ACGGTAGAC-ATAGATGTAGAT--------AACCGTATATATTAGAGCAGATCCAGAGTTAATCCT-CC---GTGTGCCTAG-CTCTGTCCC-CTAAGGACACTGCTCCCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276397 96 + 50890351 ACGGTAGAC-ATAGATGTAGAT--------AACCGTATATATTAGAGCAGATCCAGAGTTAATCCT-CC---GTGTGCCTAG-CTCTGTCCC-CTAAGGACACTGCTCCCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901743 96 - 2385121 ACGGTAGAC-ATACATGTAGAT--------AACCGTATATATTAGAGCAGATCCAGAGTTAATCCT-CC---GTGTGcctag-ctctgtccc-ctaaggacactgctcccc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342648 96 + 4274983 ACGGTAGAC-ATAGATGTGGAT--------AACGGTATATATTAGAGCAGATCCAGAGTTAATCCT-CC---GTGTGcctag-ctctgttcc-ctaaggacactgctcccc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28574081 95 + 49145316 ACTGTAGAC-ATAGATGTAGAT--------AAGGGCATATATTAGAACAGGTCCGGAGTTCATCCT-CT---GTGCACCTACCCGC--TCCT-ATAAGGACACTACTCCCA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1627462 95 - 2680843 ACTGTAGAC-ATAGATGTAGAT--------AAGGGCATATATTAGAACAGGTCTGGAGTTCATCCT-CC---ATGCACCTAGCCTC--TCCT-GTGAGGACACTActccca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 374907 95 - 4471408 ACTGTAAAC-ATAGACGTAGAT--------AAGGGCATGTATTAGAACAGGTCCAGAGTTCATCCT-CC---ATGCACCAAGCCTC--TCCT-GTAAGGACACTACCCCCA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 586306 97 + 2501019 AAGGTAGAT-ACGGACATAGAT--------AAGTCTACGTATTAGAGCAGATCCAGGGCTAATCCT-CT---GTGTGCCTGGCCTTCTTCCC-CTAAGGGCACTGCTCCCC i proCoq1.NW_012149263v1 C 0 I 19 s canFam3.chr1 4621591 106 - 122678785 aaagaaaaC-CCTGATGTAGGTGTGGACCCAGAGAGATGTAT-AGATCAGAGGCAGGGCTAATCCTCCC---CTGTGCATGGGCTTTGTCCCTCTAAGGACACTGCTCCCT i canFam3.chr1 I 193 C 0 s dasNov3.JH563638 346790 100 + 643850 ACTTCAGATAATAGACATAGGT--------AAGTGTGAATATTAGAGCAGATCTACTGTTAATCCT-CCTTTATGTTCCTTG-TCTTGTCTG-CTAAGAGCACTGCTCTTT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3969783 176 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=169788.000000 s hg38.chr19_GL383574v1_alt 83747 22 + 155864 -C-ATTGCCCTTACTCACTGGCAG s panTro5.chr19 36152318 22 + 61309027 -C-ATTGCCCTTACTCACTGGCGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898527 22 + 64411610 -C-ATTGCCCTTACTCACTGGCGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6316090 22 - 8369475 -C-ATTGCCCTTACTCACTGGCGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908897 18 - 106955855 -c-attgccctt----actggcag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30220349 22 + 53671032 -c-attgcccttactctctggcgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34673804 22 + 59248254 -C-ATTGCCCTTACTCTCTGGCGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540524 22 - 13342542 -c-attgcccttactctctggcgg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470490 22 + 7714307 -C-ATTGCCCTTACTCTCTGGCGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276493 22 + 50890351 -C-ATTGCCCTTACTCTCTGGCGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901839 22 - 2385121 -c-attgcccttactctctggcgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342744 23 + 4274983 -caattgcccttactctctggcgg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28574176 22 + 49145316 -C-ATTGCCCTTTCTCACTGGTGG i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1627557 22 - 2680843 -c-attgctcttactcactggtgg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375002 22 - 4471408 -C-ATTGCCCTTACTCACTGGTGG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4621697 17 - 122678785 -------CACCAACCTCCTGGTAA i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 346890 22 + 643850 TC-ACCACCTTT-CCCAGTGGAAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 586403 19 + 2501019 I e micMur3.chr22 3969783 176 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=175295.000000 s hg38.chr19_GL383574v1_alt 83769 15 + 155864 CAGTGGAATATTTCT s panTro5.chr19 36152340 15 + 61309027 CAGTGGAATATTTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898549 15 + 64411610 CAGTGGAATATTTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6316112 15 - 8369475 CAGTGGAATATTTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908915 15 - 106955855 cagtggaatatttct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30220371 15 + 53671032 cagtggaatatgtct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34673826 15 + 59248254 CAGTGGAATATGTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540546 15 - 13342542 cagtggaatatgtct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470512 15 + 7714307 CAGTGGAATATGTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276515 15 + 50890351 CAGTGGAATATGTCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901861 15 - 2385121 cagtggaatatgtct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342767 15 + 4274983 cagtggaatatgtct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28574198 15 + 49145316 CAGTGGAATATTTCT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1627579 15 - 2680843 cagtggaatatttct i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375024 15 - 4471408 CAGTGGCATATTTCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3969959 15 - 30143674 CAGTGGAATATTTCT i micMur3.chr22 I 176 C 0 s canFam3.chr1 4621717 15 - 122678785 CACTAGAGAGTTTCT i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 346912 14 + 643850 -AGGGGAGTATTTCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 586403 19 + 2501019 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=627374.000000 s hg38.chr19_GL383574v1_alt 83784 48 + 155864 TGCCCTACAAAACTGTGTTCAGGATGTGGATGCGGTCTCCTTGCTTCC s panTro5.chr19 36152355 48 + 61309027 TGCCCTACAAAACTGTGTTCAGGATGTGGATGCGGTCTCCTTGCTTCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898564 48 + 64411610 TGCCCTACAAAACTGTGTTCAGGATGTGGATGCGGTCTCCTTGCTTCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6316127 46 - 8369475 TGCCCTACAAAAC--TGTTCAGGATGTGGATGCGGTCTCCTTGCTTCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908930 48 - 106955855 tgccctacaaaactgtgttcaggatgtggatgcagtctccttgcttcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30220386 48 + 53671032 tgtcctacaaaactgtgttcaggatgtggacgtggcctccttgcttcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34673841 48 + 59248254 TGTCCTACAAAACTGTGTTCAGGATGTGGACGTGGCCTCCTTGCTTCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540561 48 - 13342542 tgtcctacaaaactgtgttcaggatgtggacgtggcctccttgcttcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470527 48 + 7714307 TGTCCTACAAAACTGTGTTCAGGATGTGGACGTGGCCTCCTTGCTTCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276530 48 + 50890351 TGCCCTACAAAACTGTGTTCAGGATGTGGACGTGGCCTCCTTGCTTCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901876 48 - 2385121 tgtcctacaaaactgtgttcaggatgtggacgtggcctccttgcttcc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342782 48 + 4274983 taccctacaaaactgtgttcaggatgtggacgtggcctccttgcttcc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28574213 48 + 49145316 TGCCCTGCAAACCTGTGTTCAGGATGTGGACACCGTCTCCTTGCTTCC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1627594 48 - 2680843 taccctacaaacctgtgttcaggatgtggacacagtctccttgcttcc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375039 48 - 4471408 TGCCCTACAAACCTGTATTCAGGATGTGGACACAGTCTCCTTGCTTCC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3969974 48 - 30143674 TGCCCTGCAAACCTATGTTCCGGATGTGGGTGTGGTCTTCTTTCTTCC i micMur3.chr22 C 0 I 1097 s proCoq1.NW_012149263v1 586422 48 + 2501019 TGCCCTGCAAACCTACGTTCAGGATGTGGGTGTGGTCTCCTTGCTTCC i proCoq1.NW_012149263v1 I 19 I 4 s canFam3.chr1 4621732 48 - 122678785 TGCCCTGCAAACCTGTGTTCAGGAGGTGGGCTCGGTGTCCTTGTTCCT i canFam3.chr1 C 0 I 4 s dasNov3.JH563638 346926 48 + 643850 TGCCCTACAAACCTCTGTTCAGGATGTGGAATTGGTGCCCTTGCTTCT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=138458.000000 s hg38.chr19_GL383574v1_alt 83832 14 + 155864 ------CTGCTGATAAAAAC s panTro5.chr19 36152403 14 + 61309027 ------CTGCTGATAAAAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898612 14 + 64411610 ------CTGCTGATAAAAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6316173 14 - 8369475 ------CTGCTGATAAAAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908978 12 - 106955855 ------ctgctgataaaa-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30220434 14 + 53671032 ------ctgctgataaaaac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34673889 14 + 59248254 ------CTGCTGATAAAAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540609 14 - 13342542 ------ctgctgataaaaac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470575 14 + 7714307 ------CTGCTGATAAAAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276578 14 + 50890351 ------CTGCTGATAAAAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901924 14 - 2385121 ------ctgctgataaaaac i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342830 14 + 4274983 ------ctgctgataaaaac i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28574261 13 + 49145316 ------CTGCTGAT-AAAAC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1627642 14 - 2680843 ------ctgctgataaaaac i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375087 14 - 4471408 ------CTGCTGATAAAAAC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 586474 14 + 2501019 ------CTTCTGGTAAAAAC i proCoq1.NW_012149263v1 I 4 I 120 s canFam3.chr1 4621784 14 - 122678785 ------CTGCTGGTGAACCC i canFam3.chr1 I 4 I 2 s dasNov3.JH563638 346974 19 + 643850 TCCCTTCTCCAGTTCAAAA- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3970022 1097 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=1174378.000000 s hg38.chr19_GL383574v1_alt 83846 128 + 155864 TCCTACCCCAGTGAGGTT-ATGTGATCCTCTCACTCTCCTGGTGATGACCATTTAATGACCTGATCTCTGCCCATCATATCGTGAGAAGTCTGATACT--CATCTTCCTCTTCCTCTCCCCTTCTGTCTTA s panTro5.chr19 36152417 128 + 61309027 TCCTACCCCAGTGAGGTT-ATGTGATCCTCTCACTCTCCTGGTGATGACCATTTAATGACCTGATCTCTGCCCATCATATCGTGAGAAGTCTGATACT--CATCTTCCTCTTCCTCTCCCCTTCTGTCTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898626 128 + 64411610 TCCTACCCCAGTGAGGTT-ATGTGATCCTCTCACTCTCCTGGTGATGACCATTTAATGACCTGATCTCTGCCCATCATATCGTGAGAAGTCTGATACT--CATCTTCCTCTTCCTCTCCCCTTCTGTCTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6316187 128 - 8369475 TCCTACCCCAGTGAGGTT-ATGTGATCCTCTCACTCTCCTGGTGATGACCATTTAATGACCTGATCTCTGCCCATCATATCGTGAGAAGTCTGATACT--CATCTTCCTCTTCCTCTCCCCTTCTGTCTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63908990 125 - 106955855 ----accccagtgaggttcatgtgatcctctcactctcctggtgatgaccattgaatgacctgatctctgcccatcatatcgtgagaagtctgatacc--cgtcttcctcttcctctcctcttctgttcta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30220448 127 + 53671032 tcctatcccagtgaggttcatgtgatcccctcactctcctggtgatgaccatttaatgacctgatctctgcccatc--atcgtgagaagtctgatacc--cgtcttcctcttcctctccccttctgtccta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34673903 127 + 59248254 TCCTATCCCAGTGAGGTTCATGTGATCCCCTCACTCTCCTGGTGATGACCATTTAATGACCTGATCTCTGCCCATC--ATCGTGAGAAGTCTGATACC--CATCTTCCTCTTCCTCTCCCCTTCTGTCCTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540623 127 - 13342542 tcctatcccagtgaggttcatgtgatcccctcactctcctggtgatgaccatttaatgacctgatctctgcccacc--atcgtgagaagtctgatacc--cgtcttcctcttcctctccccttctgtccta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470589 125 + 7714307 TCCTACCCCAGTGAGGTTCATGTGATCCCCTCA--CTCCTGGTGATGACCATTTAATGACCTGATCTCTGCCCATC--ATCATGAGAAGTCTGATACC--CGTCTTCCTCTTCCTCTCCCCTTCTGTCCTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276592 127 + 50890351 TCCTACCCCAGTGAGGTTCATGTGATCCCCTCACTCTCCTGGTGATGACCATTTAATGACCTGATCTCTGCCCATC--ATCGTGAGAAGTCTGATACC--CGTCTTCCTCTTCCTCTCCCCTTCTGTCCTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 901938 127 - 2385121 tcctaccccagtgaggttcatgtgatcccctcactctcctggtgatgaccatttaatgacctgatctctgcccatc--atcgtgagaagtctgatacc--cgtcttcctcttcctctccccttctgtccta i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342844 129 + 4274983 tcctaccccagtgaggttcatgtgatcctctcactctcctggtgatgaccatttaatgacctgatctctgcccatc--atcgtgagaagtctgatacccgcgtcttcctcttcctctcgccttctgtccta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28574274 122 + 49145316 CCCTACCCCAGTGAGGTTTGTGTGGTCCTCTTACTCTCCTGGTGATGATAATTTAATGACCTGATCGCTGCTCATC--ATCTTGAGAAGTCTGATACC--CATCTTCATCTTCCTCTCCCCTTC-----TA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1627656 122 - 2680843 ccctaccccagtgaggtttgtgtgatcctctcactctcctggtgatgatcatttaatgacctgattgctgcccatc--atcttgagaaGCCTAATACC--CATCTTCATCTTCCCCTCCCCTTC-----TA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375101 122 - 4471408 CCCTACCCCAGTGAGGTTTGTGTGATCCTCTCACTCTCCTGGTGATGATCATTTAATGACCTGATCGCTGTCCATC--AACTTGAGAAGTCGGATACC--CATCTTCATCTTCCTCTCCCCTTC-----TA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4621800 121 - 122678785 GCTTGCTTTGTTGAGGCACATGTGATCCTCTC--CCTCCTCCTCATGATCATCTCAT---CCGATTACGACCCATT--CTCTTGGAAATTCTGATACC--TGCCTTCCTCTTCCTCTACGCTCCTGTCCT- i canFam3.chr1 I 2 C 0 s dasNov3.JH563638 346993 108 + 643850 TCCTACTCTATTGAGGCTTATGGGATCC------TCTCCTGGTTATGATCATCGAATGACCTGATA------------CTACTTGAAAATCTAATACT---GCCTTCCTCTTGCTCTCTACTTCCATCC-- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 586488 120 + 2501019 I e micMur3.chr22 3970022 1097 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=440579.000000 s hg38.chr19_GL383574v1_alt 83974 41 + 155864 TTCAAAGTGACTTCAGCTGTTGTGTGATCTACCCATCTGTA s panTro5.chr19 36152545 41 + 61309027 TTCAAAGTGACTTCAGCTGTTGCGTGATCTACCCATCTGTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898754 41 + 64411610 TTCAAAGTGACTTCAGCTGTTGCGTGATCTACCCATCTGTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6316315 41 - 8369475 TTCAAAGTGACTTCAGCTGTTGTGTGATCTACCCATCTGTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63909115 41 - 106955855 ttcaaagtgacttcaGCTGTTGTGTGATCTACCCATCTGTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30220575 41 + 53671032 ttcaaagtgacttcaGCTGTTATGTGATCTACCCATCTGTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34674030 41 + 59248254 TTCAAAGTGACTTCAGCTGTTATGTGATCTACCCATCTGTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540750 41 - 13342542 ttcaaagtgacttcaGCTGTTATGTGATCTACCCATCTGTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470714 41 + 7714307 TTCAAAGTGACTTCAGCTGTTATGTGATCTACCCATCTGTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276719 41 + 50890351 TTCAAAGTGACTTCAGCTGTTATGTGATCTACCCGTCTGCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 902065 41 - 2385121 ttcaaagtgacttcaGCTGTTATGTGATCTACCCATCTGTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2342973 41 + 4274983 ttcaaagtgacttcaGCTGTTATGTGATCTACCCATCTGTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28574396 41 + 49145316 TTCAAAGTGACCTCAGCTGCTGTGTGATCTACCCATCTGTA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1627778 28 - 2680843 TTCAAAGTGACCTCAGCTGCTGTG-------------TGTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375223 41 - 4471408 TTCAAAGTGACCTCAGCTGCTGTGTGATCTGCCCATCTGTA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 586608 41 + 2501019 TCCAGAATGACTTCACCTGCTGTGTGACTTACCCACCTGTG i proCoq1.NW_012149263v1 I 120 C 0 s canFam3.chr1 4621921 38 - 122678785 -TCCGAGGG--TCCAACTTCTGTGTGGTTTACCCATCTGCA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 347101 40 + 643850 TTCTGAATGGCTTCTGCTTCTGTGTGGTTTA-CCACCtgtg i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3970022 1097 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111099627 2224 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=275346.000000 s hg38.chr19_GL383574v1_alt 84015 24 + 155864 CTGGGGGTCCCCAGGGTAATCGCA s panTro5.chr19 36152586 24 + 61309027 CTGGGGGTCCCCAGGGtaatcgca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898795 24 + 64411610 CTGGGGGTCCCCAGGGtaatcgca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6316356 24 - 8369475 CTGGGGGTCCCCAGAGtaatcgca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63909156 24 - 106955855 TTGGGGGTCCCCAGGGtaatcgca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30220616 24 + 53671032 TTGGGAGTCCCCAGGGtaatcaca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34674071 24 + 59248254 TTGGGAGTCCCCAGGGtaatcaca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540791 24 - 13342542 TTGGGAGTCCCCAGGGtaatcaca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470755 24 + 7714307 TTGGGAGTCCCCAGGGtaatcgca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276760 24 + 50890351 TTGGGAGTCCCCAGGGtaatcgca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 902106 24 - 2385121 TTGGGAGTCCCCAGGGtaatcgca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2343014 24 + 4274983 TGGGGAGTCCCCAGGGtaatcgca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28574437 24 + 49145316 CTGGGAGTCCCAATGGtaatcaca i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1627806 24 - 2680843 CCGGGAGTCCCGATGGtaatcgca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375264 24 - 4471408 CTGGGAGTCCCGATGGtaatcgca i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 586649 24 + 2501019 TTGGGAGTCCCCCGGataatcata i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111101851 24 - 145441459 CTGGGAGTCCACAAGACCAtcatt i mm10.chr7 I 2224 C 0 s canFam3.chr1 4621959 24 - 122678785 TTGAGAGACCCCAAGGTAACCCTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 347141 24 + 643850 ttggaagtccccaagaccacccca i dasNov3.JH563638 C 0 I 2804 e micMur3.chr22 3970022 1097 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=1252753.000000 s hg38.chr19_GL383574v1_alt 84039 130 + 155864 CGCATGGCTATGACAGTGTACAGTGACAGGAtacagtgacaggatacaaagcaaaattcacaaagggaaaagatgtgtgggcaaagtctggaggaaaccaggctcaaacttgcaacggggacttagaaag s panTro5.chr19 36152610 117 + 61309027 cgcatggctatga-----tatag--------tacagtgacaggatacaaagcaaaattcacaaagggaaaagatgtgtgggcaaagtctggaggaaaccaggctcaaacttgcaacggggacttagaaag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898819 117 + 64411610 cgcatggctatga-----tatag--------tacagtgacaggatacaaagcaaaattcacaaagggaaaagatgtgtgggcaaagtctggaggaaaccaggctcaaacttgcaacggggacttagaaag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6316380 117 - 8369475 cgcatggctatga-----tatag--------tacagtgacaggatacaaagcaaaattcacaaagggaaaagatgtgtgggcaaagtctggaggaaaccaggctgaaacttgcaacggggacttagaaag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63909180 117 - 106955855 tgcatggctatga-----tatat--------tacagtgacaggatacaaagcaaaattcacaaagggaaaagatgcgtgggcaatgtctggaggaaaccaggctcaaacttacaatggggactcagaaag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30220640 117 + 53671032 cgcatggctatga-----tatat--------tacagtgacaggatgcaaagcaaaattcccaaagggaaaagatgcgtgggcaaagtctggaggaaaccaggctcaaacttacaaaggggacttagaaag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34674095 117 + 59248254 cgcatggctatga-----tatat--------tacagtgacaggatgcaaagcaaaattcccaaagggaaaagatgcgtgggcaaagtctggaggaaaccaggctcaaacttacaaaggggacttagaaag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540815 117 - 13342542 cgcatggctatga-----tatat--------tacagtgacaggatgcaaagcaaaattcccaaagggaaaagatgcgtgggcaaagtctggaggaaaccaggctcaaacttacaaaggggacttagaaag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470779 117 + 7714307 cgcatggctatga-----tatat--------tacagtgacaggatgcaaagcaaaattcccaaagggaaaagatgcgtgggcaaagtctggaggaaaccaggctcaaacttacaaaggggacttagaaag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276784 117 + 50890351 cgcatggctgtga-----tgtat--------tacagtgacaggatgcaaagcaaaattcccaaagggaaaagatgcatgggcaaagtctggaggaaaccaggctcaaacttacaaaggggacttagaaag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 902130 117 - 2385121 cgcatggctatga-----tatat--------tacagtgacaggatgcaaagcaaaattcccaaagggaaaagatgcgtgggcaaagtctggaggaaaccaggctcaaacttacaaAGGGGACTTAGAAAG i manLeu1.NW_012102454v1 C 0 I 1791 s colAng1.NW_012111697v1 2343038 117 + 4274983 tgcatggctatga-----tgtat--------tacagtgacaggatacaaagcaaaactcacaaagggaaaagatgcgtgggcaaagtctggaggaaaccaggctcaaacttacaaagggggcttagaaag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28574461 115 + 49145316 cgcatggctatga-----tatgt--------tacagtgacaggatacaaagcagaattcac--agagaaaagatgccttggcaaactctggaggaaaccaggcttaaacttacaaaggggacttagaaag i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1627830 117 - 2680843 cgcatggctatga-----tatgt--------tacagtgacaggatacaaagccgaattcacaaagagaaaagatgcctgggcaaagtctggaggaaaccaggcttaaacttacaaaggggacttagaaag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375288 116 - 4471408 tgcatggctatga-----tatgt--------tacagtgacaggatacaaagcagaattcaa-aagagaaaagatgcctgggcaaagtctggaggaaaccaggcttaaacttacaaaggggacttagaaag i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 586673 117 + 2501019 ctcacggctgtaa-----tacat--------gacattgacagggtacaaagcaaaatcagcaaagggaagagacacgtgggcaaagtctgaaggaaaccaggttcagactttcaacggggactgggaaaa i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111101875 105 - 145441459 cttgtggccatgg-----tgtgt--------tcctctggaagaattccaagcag---------agggaagaggcccaggagcagag--tgcaaaacaccagatccaagcgt-tgaaggagacttaggaag i mm10.chr7 C 0 C 0 s canFam3.chr1 4621983 116 - 122678785 Atcaaagctatga-----tttct--------taaaacaaaaggataccaagcaaagttagcgaagggaaaagacacaggggcagagtctggagaaaaccagcctcaaactttcagggggcacttggaag- i canFam3.chr1 C 0 C 0 e micMur3.chr22 3970022 1097 - 30143674 I e dasNov3.JH563638 347165 2804 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e saiBol1.JH378197 5418497 874 + 8899380 I a score=2002925.000000 s hg38.chr19_GL383574v1_alt 84169 230 + 155864 cggagcct--cacgggatgtgcttag---cttctccagcagggagttgcaacaacatgcgtggga----tattgtctgccagggaagcttc----agacttagt---tgcccagggtttttac----------tgggggctgattatgcagacaccctctgcgtggcacgtgccaaaattccaggctcccagaagtaaagcacaagcaaaccacattg--tttaca--------------acagtctggatacagtgcaccactcct-accag s panTro5.chr19 36152727 230 + 61309027 cggagcct--cacgggatgcgcttag---cttctccagcagggagttgcaacaacatgcgtggga----tattatctgccagggaagcttc----agacttagt---tgcccagggtttttac----------tgggggctgattatgcagacaccctctgcgtggcacatgccaaaattccaggctcccagaagtaaagcacaagcaaaccacattg--tttaca--------------acagtctggatacagtgcaccactctt-agaag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39898936 230 + 64411610 cggagcct--cacgggatgtgcttag---cttctccagcagggagttgcaacaacatgcgtggga----tattatctgccagggaagcttc----agacttagt---tgcccagggtttttac----------tgggggctgattatgcagacaccctctgcgtggcacatgccaaaattccaggctcccagaagtaaagcacaagcaaaccacattg--tttaca--------------acagtctggatacagtgcaccactctt-accag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6316497 230 - 8369475 cggagcct--cacgggatgtgcttag---cttctccagcagggagttgcaacaacatgcgtggga----tattgtctgccagggaagcttc----agacttagt---tgcccagggtttttac----------tgggggctgattatgcagacaccctctgcgtggcacatgccaaaattccaggctcccagaagtaaagcacaagcaaaccacattg--tttaca--------------acagtctggatacagtgcaccactctt-accag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63909297 243 - 106955855 cggagcct--cacaggatgtgcttaacttcttctccagcagggagttgcaacaacatgcgtggga----tattgtctaccagggaagcttc----agacttagt---tgcccagggtttttac----------tgggggctgattatgcagacaccctctgcgtggcacatgccaaaattccaggctcccagaagtaaagcacaagtaaaccacactg--tttacaacagtctggt----acagtctggatacagtgcaccactctt-accag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30220757 241 + 53671032 tagaacct--cacaggacgtgcttaa---ttcccccagcaaggagttgcaacaacatgcgtggaa----tgttgtctaccagggaagcttc----agactcagt---tgcccagggtttttat----------tgggggctgagtacgcagacaccttctacgtggcacatgccaaaattccaggctcccagaagtaaagcacaagtaaaccacattg--tttacaacagtctggt----acagtctggatgcagcgcaccactcttaaccag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34674212 241 + 59248254 tagaacct--cacaggacgtgcttaa---ttcccccagcaaggagttgcaacaacatgcgtggaa----tgttgtctaccagggaagcttc----agactcagt---tgcccagggtttttat----------tgggggctgagtacgcagacaccttctgcgtggcacatgccaaaattccaggctcccagaagtaaagcacaagtaaaccacattg--tttacaacagtctggt----acagtctggatgcagcgcaccactcttaaccag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4540932 243 - 13342542 tagaacctcacacaggacgtgcttaa---ttcccccagcaaggagttgcaacaacatgcgtggaa----tgttgtctgccagggaagcttc----agactcagt---tgcccagggtttttat----------tgggggctgagtacgcagacaccttctacgtggcacatgccaaaattccaggctcccagaagtaaagcacaagtaaaccacattg--tttacaacagtctggt----acagtctggatgcagcgcaccactcttaaccag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5470896 241 + 7714307 tagaacct--ctcaggacgtgcttaa---ttcccccagcaaggagttgcaacaacatgcgtggaa----tgttgtctaccagggaagcttc----agactcagt---tgcccagggtttttat----------tgggggctgagtacgcagagaccttctgcgtggcacatgccaaaattccaggctcccagaaggaaagcacaagtaaaccacattg--tttacaacagtctggt----acagtctggatgcagcgcaccactcttaaccag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29276901 239 + 50890351 tagaacct--cacaggatgtgcttaa---ttcccccagcaaggagttgcaacaacatgcatggaa----tgttgtctaccagggaagcttc----agactcagt---tgcccagggtttttat----------tgggggctgagtaggcagacaccttctgcgtagcacttgccaaaattccaggctcccagaagtaaagcacaagtaaaccacattg--tttacaacagtctggt----acagtctggatgcagcgcaccactc--aaccag i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343155 241 + 4274983 tagaacct--cacaggatgtgcttaa---ttcccccagcaaggaattgcaacaacatgcgtggaa----tgttgtctaccagggaagcttc----agactcagt---tgcccagggttcttat----------tgggggctgagtatgcagacaacttctgcatggcatatgccaaaattccaggctcccagaagtaaagcacaagtaaaccacattg--tttacaacagtctggt----gcagtctggatgcagcgcaccactcttaaccag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28574576 239 + 49145316 cagagctt--caagggatgggcttaa---ctcccccagcaaggagttg---caacatgcatataa----tgttgtctacaagggaagcccc----agactcagt---tgctca-ggtttttac----------tggagactgattatgcagacaccctctgagtggc-catgccaaaattccagactctcagaagtaaagcacaagtaaaccacattg--tttacaacagtctggtacagacagtctagatatagtgcgccactctt-atcag i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1627947 234 - 2680843 cagagctt--cacaggatgggcttaa---ctcccccagcaaggagttg---caacatgcatgtaa----tgttgtctgcaagggaagctcc----agactcagt---tgctca-ggtttttat----------tggagaccgattatgcagagaccctctgagtggc-catgccaaaattccagactctcag-----aagcacaagtaaaccacattg--tttacaacagtctggtacagacagtctagatatagtgcgccattctt-atcgg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375404 236 - 4471408 cagagctt--cacgggatgggcttaa---ctcccccagcaaggagttg---caacatgcatgtaa----tgttgtctacaagggaagctcc----agactcagt---tgctca-ggtttttat----------tggagactgattttgcagacaccctctgagtggc-catgccaaaattccagactctcagaagtaaagcaca---aaaccgcattg--tttacaacagtctggtacagacagtctagatatagtgcgccactctt-atcag i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 586790 232 + 2501019 tggagcat--cacaggatgtgtttaa---ctcccctagtgacgagttttaacagcatgcgtggag----tgttgtctaccagggaagctca----agactcagtcagtgcctagagattttac----------tgggggctgattctgtagacaccctctgcgtggcacatgccaaagttctaaaccgccggaaataaagcacaagaaaaccacactg----cacaa-------------atggttttggtacagtgagccactctt-agcag i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111101980 234 - 145441459 tggagcct--ctcaagatgcgtccag----ttctccaacgttaagt-------atacgggtgaaagcagtgctgcctgccaag---gctta----agactcag----tgcccatggcttccatgctggggtggggaggactggctacataagcaccttctgcctgccttacacccaaatgccacacttccagcagt-aaccacaagcaaaccacattg--tttgtg-cag----------acagtgtagaaacagtgagccattctt-agcag i mm10.chr7 C 0 C 0 s canFam3.chr1 4622099 235 - 122678785 tggaatca--cccagggtgtacttca---atcccccagcaacagggtgtcacaacacaggtggaa----tgttgtctaccggggaagctcatgagagacttag----tgcccaggattttgat----------tgtgggctggccacgtaggcgctgtctgcttggcacatccccaaatgccagagttccaaaagtaaagcacaactaagccatattgattgtaca--------------gcggttgaggcacagggagccactctt-ccctg i canFam3.chr1 C 0 C 0 e micMur3.chr22 3970022 1097 - 30143674 I e dasNov3.JH563638 347165 2804 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e saiBol1.JH378197 5418497 874 + 8899380 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I a score=1746849.000000 s hg38.chr19_GL383574v1_alt 84399 178 + 155864 ttctggga-------atggcgggaaccctcctgaaat--------ccagatgtcaggcgagagccaaacttacaagcaggccttgtaaatgacagcagt----caaacctgcttcgttaactcctctgcacaCTCGCCCACACCCTGGCTTCCGTC-C-TTGTCCTGTGACATTTTCCTGTTGTCCCCTCCTACCCAAA s panTro5.chr19 36152957 178 + 61309027 ttctggga-------atggcgggaaccctcctgcaat--------ccagatgtcaggcgagagccaaacttacaagcaggccttgtaaatgacagcagt----caaacctgcttcgttaactcctctgcacaCTCGCCCACACCCTGGCTTCCGTC-C-TTGTCCTGTGACATTTTCCTGTTGTCCCCTCCTACCCAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899166 178 + 64411610 ttctggga-------atggcgggaaccctcctgcaat--------ccagatgtcaggcgagagccaaacttacaagcaggccttgtaaatgacagcagt----caaaccagcttcgttaactcctctgcacaCTCGCCCACAccctggcttccgtc-c-ttgtcctgtgacattttcctgttgtcccctcctacccaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6316727 178 - 8369475 ttctggga-------atggcgggaaccctcctgaaat--------ccagatgtcaggcgagagccaaacttataagcaggccttgtaaatgacagcagt----caaacctgcttcgttaactcctctgcacaCTCGCCCACAccctggcttccgtc-c-ttgtcctgtgacattttcctgttgtcccctcctacccaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63909540 178 - 106955855 ttctggga-------atggtgggaaccctcctgaaat--------ccagatgtcaggcaagagccaaacttataagcagaccttgtaaatgacagcggt----caaacctgcttcgtcaactcctctgcacacttgcccacaccctggcttccatc-c-ttgtcctgtgaccttttcctgttgtcccctcctacccaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30220998 178 + 53671032 ttctggga-------atggtgggaaccctcctgaaat--------ccaaatgttaggcaagagccaaacttataagcaggttttgtaaatgacagcagt----caaacctgcttcgttaactcctctgcacaCTCGcccacaccctgggttccttc-c-ttgtcctgtgaccttttcctgtcgtcccctcctacccaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34674453 178 + 59248254 ttctggga-------atggtgggaaccctcctgaaat--------ccaaatgttaggcaagagccaaacttataagcaggttttgtaaatgacagcagt----caaacctgcttcattaactcctctgcacaCTCGCCCACAccctgggttccttc-c-ttgtcctgtgaccttttcctgtcgtcccctcctacccaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4541175 178 - 13342542 ttctggga-------atggtgggaaccctcctgaaac--------ccaaatgttaggcaagagccaaacttataagcaggttttgtaaatgacagcagt----caaacctgcttcgttaactcctctgcacaCTCGcccacaccctgggttccttc-t-ttgtcctgtgaccttttcctgtcgtcccctcctacccaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5471137 178 + 7714307 ttctggga-------atggtgggaaccctcctgaaat--------ccaaatgttaggcaagagccaaacttataagcaggttttgtaaatgacagcagt----caaacctgcttcgttaactcctctgcacaCTCGcccacaccctgggttccttc-c-ttgtcctgtgaccttttcctgtcgtcccctcctacccaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277140 178 + 50890351 ttctggga-------atggtgggaaccctcctgatat--------ccaaatgttaggcaagagccaaacttataagcaggctttgtaaatgacagcagt----caaacctgcttcgttaactcctctgcacaCTCGCCCACACGCTGGGTTccttc-c-ttgtcctgtgaccttttcctgtcgtcccctcctacccaaa i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343396 178 + 4274983 ttctggga-------atggtgggaaccctcctgaaat--------ccaaatgttaggcaagagccaaatttataagcaggctttgtaaatgacagcagt----caaacctgcttcgttaactcctctgcacaCTCGCCCACAccctgacttccgtc-c-ttgtcctgtgaccttttcctgtcgtcccctcctacccaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28574815 164 + 49145316 ttctggga-------atggtgggaaccctcctgaaat--------gcagatgtcaggcaagagccaaacttacaagcaggccttgcaaatgacagtggt----caaacctgcttt-ttaactcctctgcacaCTAGCCCACACCCTGGCTCCCATC-C-TTG-------------TCCTGTCATCCCCTCCTACCCAAA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1628181 165 - 2680843 ttctggga-------atggtgggaaccctcctgaaat--------tcaggtgtcaggcaagagccatacttataagcaggacttgcaaatgacagcggt----caaacctggtttgttaactcctctgcacaCTAGCCCACACCCTGGCTCCCATC-C-TTG-------------TCCTGTTGTCCCCTCCTACCAAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375640 165 - 4471408 ttctggga-------atggtgggaaccctcctgaaat--------tcagatgtcaggcaagagccaaacttataagcaggacttgcaaatgacagcggt----caaatctgctttgttaactcctctgcacaCTAGCCCACACCCTGGctcccatc-c-ttg-------------tcctgtcgtcccctcttacccaaa i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 587022 182 + 2501019 tcctggaa-------atggtgggaaccctcctgaaatctaagtggccagatggcaggcaaaagccaaactcgtaagcaggccttataaagggtagcagt----gaaacctgc--cgttacctcttctgcacaCTGtcccacaccctagtttctgttac-ttgtcctgtgaccttttcctctcat---ctcccacctaaa i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111102214 188 - 145441459 ttctggaattggggcatgggaggggctatctggcagtacacacttccagatggcgggcaagaggaagactcgtgag--agtcctaaagccacaggcagt----tcgacctgctgcgata---cctcAGCACATCACTGCACACCCTGACTTTGTCC-C-TTGTCCAGTGATCTTTTCCGCTCATCCCCTCCTATGTAAC i mm10.chr7 C 0 C 0 s canFam3.chr1 4622334 180 - 122678785 ttctagga-------atgatagaaacccttctgaaatccaagtttccagatagcagccaaggccccaacttgtaagccggaatcctaaagggtagtcgt----ctggcctgggatgttaacttctctgcccaT---CCCACACCCTGGCTCCTGTC-CGTTGTCCTGTGACCTTTTCCTGTTA----CTCCTCCCAAAA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 349969 189 + 643850 ttttggga-------atggtgggaaccttcccaaagtccaagttcccacatgccagcccagggccaatcttgtaagcaggagttttaaaagatagcagtcaaacaaacatgctatgttaact--tttgcacaCTATTCCACATTCTAACTCCTATTTC-TTGTCCTGTGACCTTTTCCTCTCAATCCCTCCCACTCAAA i dasNov3.JH563638 I 2804 C 0 e micMur3.chr22 3970022 1097 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e saiBol1.JH378197 5418497 874 + 8899380 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I a score=502292.000000 s hg38.chr19_GL383574v1_alt 84577 42 + 155864 GCTGTAGACACACCTGGACCTTGTCCATCAACCTCAACTGCA s panTro5.chr19 36153135 42 + 61309027 GCTGTAGACACACCTGGACCTTGTCCATCAACCTCAACTGCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899344 42 + 64411610 gctgtagacacacctggaccttgtccatcaacctcaactgca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6316905 42 - 8369475 gctgtagacacacctggaccttgtccatcaacctcaactgca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63909718 42 - 106955855 gctgtggacacacctgaaccttgtccatcaacctcaactgca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30221176 42 + 53671032 gctgtagacacacctggaccttgtccatcaacctcagctgca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34674631 42 + 59248254 gctgtagacacacctggaccttgtccatcaacctcagctgca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4541353 42 - 13342542 gctgtagacacacctggaccttgtccatcaacctcagctgca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5471315 42 + 7714307 gctgtagacacacctggaccttgtccatcaacctcagctgca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277318 42 + 50890351 gctgtagacacacctggaccttgtccatcaacctcagctgca i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343574 42 + 4274983 gctgtagacacacctggaccttgtccatcaacctcagctgca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28574979 41 + 49145316 GCTGTGGACACACCTGGACCTTGTCCATCAA-CTCAATTGTA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1628346 41 - 2680843 GCTGTGGACACACCTGGACCTTGTCCATCAA-CTCAACTGTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375805 41 - 4471408 gctgtggacacacctggaccttgtccatcaa-ctcaactgta i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3971119 42 - 30143674 GCTGTGGACACACCCGGACCTTGTCCGTCAACCTCAACTGCA i micMur3.chr22 I 1097 C 0 s proCoq1.NW_012149263v1 587204 41 + 2501019 gccgtggtcaca-ctggaccttgtccgtcaccctcaaccgca i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111102402 35 - 145441459 ACCATGGACACACC-------TGTCCATCCACCCCGTCTGCA i mm10.chr7 C 0 I 72 s canFam3.chr1 4622514 42 - 122678785 GCTGTGGACACACCTGGACCTTGTACATCAACATCAGTTGCA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 350158 38 + 643850 GTCTTGGCCA---CTATACCTTGTTCATCCACCTTAATTGC- i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5490491 138 + 5549422 I e saiBol1.JH378197 5418497 874 + 8899380 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I a score=-22665.000000 s hg38.chr19_GL383574v1_alt 84619 2 + 155864 AC- s panTro5.chr19 36153177 2 + 61309027 AC- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899386 2 + 64411610 ac- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6316947 2 - 8369475 ac- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63909760 1 - 106955855 a-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30221218 1 + 53671032 a-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34674673 1 + 59248254 a-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4541395 1 - 13342542 a-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5471357 1 + 7714307 a-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277360 1 + 50890351 a-- i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343616 1 + 4274983 a-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28575020 1 + 49145316 A-- i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1628387 1 - 2680843 A-- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375846 1 - 4471408 a-- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3971161 1 - 30143674 A-- i micMur3.chr22 C 0 I 4583 s proCoq1.NW_012149263v1 587245 1 + 2501019 a-- i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4622556 1 - 122678785 -T- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 350196 2 + 643850 -CT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I a score=550858.000000 s hg38.chr19_GL383574v1_alt 84621 56 + 155864 CACCTCCAAATCACAGACTT-AGACACCCCGCCCTTTGACCTTCCAGCTGTCTTGCT s panTro5.chr19 36153179 56 + 61309027 CACCTCCAAATCACAGACTT-AGACACCCCACCCTTTGACCTTCCAGCTGTCTTGCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899388 56 + 64411610 cacctccaaatcacagactt-agacaccccaccctttgaccttccagctgtcttgct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6316949 56 - 8369475 cacctccaaatcacagactt-aaacaccccaccctttgaccTTCCAGCTGTCTTACT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63909761 57 - 106955855 cacctccaaatcacagacttaagataccccaccctttgaccttccagctgtcttgct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30221219 56 + 53671032 cacctccaaatcacagattt-agataccccactctttgaccttccagctgtcttgct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34674674 56 + 59248254 cacctccaaatcacagattt-agataccccactctttgaccttccagctgtcttgct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4541396 56 - 13342542 cacctccacatcacagattt-agataccccactctttgaccttccagctgtcttgct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5471358 56 + 7714307 cacctccaaatcacagattt-agataccccactctttcaacttccagctgtcttgct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277361 56 + 50890351 cacctccaaatcacagattg-agataccccactctttgaccTTCCAGCTGTCTTGCT i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343617 56 + 4274983 cacttccaaatcacagattt-agataccccactctttgaccttccagctgtcttgct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28575021 56 + 49145316 CATCTCCAAATCACAGATTT-AGATACCCAACCTGTTCACCTTCCAGCTGTCTTGCT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1628388 55 - 2680843 TACCTCCAAATCACAGATTT-AGATACCCCACC-ATTCACCTTCCAGCTGTCTTGCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375847 56 - 4471408 cacctccaaatcacatattt-agataccccacccattcaccttccagctgtcttgct i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 587246 56 + 2501019 cacctctgaatcacaggttt-agatgccacatgctttgatcttccagctggcttgct i proCoq1.NW_012149263v1 C 0 I 377 s canFam3.chr1 4622557 54 - 122678785 CACTTCTAAATCATGGATTT-TGACACTCCAC--ATTGATCTTCTGATTGGCTTACT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 350198 55 + 643850 CACCTCCAAATTACAGACTT-AAACACCCAACTCTTT-ACGTTCCAGTTGGCTTGCT i dasNov3.JH563638 C 0 I 1 e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I a score=7350.000000 s hg38.chr19_GL383574v1_alt 84677 1 + 155864 G s panTro5.chr19 36153235 1 + 61309027 C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899444 1 + 64411610 c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317005 1 - 8369475 C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63909818 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30221275 1 + 53671032 c i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34674730 1 + 59248254 c i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4541452 1 - 13342542 c i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5471414 1 + 7714307 c i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277417 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343673 1 + 4274983 c i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28575077 1 + 49145316 C i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1628443 1 - 2680843 C i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375903 1 - 4471408 c i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4622611 1 - 122678785 C i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350253 1 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e saiBol1.JH378197 5418497 874 + 8899380 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I a score=55803.000000 s hg38.chr19_GL383574v1_alt 84678 18 + 155864 AAGAAATAGCTaaaaaaa s panTro5.chr19 36153236 14 + 61309027 AAGAAATAGCT----aaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899445 13 + 64411610 aAGAAATAGCT-----aa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317006 12 - 8369475 AAGAAATAGCT------a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63909819 18 - 106955855 aAGAAACAGCTAAGAAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30221276 18 + 53671032 aAGAAATAACTTAAAAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34674731 18 + 59248254 aAGAAATAACTTAAAAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4541453 18 - 13342542 aAGAAATAACTTAAAAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5471415 18 + 7714307 aagaaataacttaaaaag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277418 14 + 50890351 AAGAAATAACTT----AG i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343674 13 + 4274983 aAGAAATAA-----AAAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28575078 11 + 49145316 AATAAATAACT------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5419371 11 + 8899380 aagaaataact------- i saiBol1.JH378197 I 874 C 0 s cebCap1.NW_016107633v1 1628444 11 - 2680843 AAGAAATAAAT------- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375904 11 - 4471408 aAGaaataact------- i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4622612 18 - 122678785 AAGAAATCACTCTGgggg i canFam3.chr1 C 0 I 253 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350253 1 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I a score=49466.000000 s hg38.chr19_GL383574v1_alt 84696 6 + 155864 aaaaaa s panTro5.chr19 36153250 6 + 61309027 aaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899458 6 + 64411610 aaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317018 6 - 8369475 aaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63909837 6 - 106955855 ATAAAA i nomLeu3.chr10 C 0 I 447 s rheMac8.chr19 30221294 6 + 53671032 AAAAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34674749 6 + 59248254 AAAAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4541471 6 - 13342542 AAAAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5471433 6 + 7714307 aaaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277432 6 + 50890351 AAAAAA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343687 6 + 4274983 AAAAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28575089 6 + 49145316 AAAAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5419382 6 + 8899380 aaaaaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1628455 3 - 2680843 ---AAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375915 6 - 4471408 aaaaaa i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350253 1 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e canFam3.chr1 4622630 253 - 122678785 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I a score=525504.000000 s hg38.chr19_GL383574v1_alt 84702 101 + 155864 aaaaaacataaaaaaaTTCAggccaggcgcggtggctcacgcccgtcatctcagcaatttgggaggccaaggcgggcagatcacgaggtcaggagatcgag s panTro5.chr19 36153256 101 + 61309027 aaaaaccacaaaaaaaTTCAggccaggcgcggtggctcacgcccatcatctcagcaatctgggaggccaaggcgggcagatcacgaggtcaggagatcgag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899464 101 + 64411610 acaaaacataaaaaaaTTCAggccaggcgcggtggctcacgcccatcatctcagcaatctgggaggccaaggcgggcagatcacgaggtcaggagatcgag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317024 101 - 8369475 aaaaaacataaaaaaaTTCAggccaggcatggtggcttacgcccgttgtctcagcaatttgggaggccaaggcgggcagatcacgaggtcaggagatcgag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910290 99 - 106955855 AAAGAAAAAAAAAAAATTTAggccgggcgcggtggctaatgcccatcctctcagca--ctgggaggccaaggcgggcagatcacgaggtcaggagaacgag i nomLeu3.chr10 I 447 C 0 s rheMac8.chr19 30221300 84 + 53671032 -----------------TTAggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcagatcacgaggtcaggagatcgag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34674755 84 + 59248254 -----------------TTAggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcagatcacgaggtcaggagatcgag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4541477 84 - 13342542 -----------------TTAggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcagatcacgaggtcaggagatcgag i macNem1.NW_012011689v1 C 0 I 943 s cerAty1.NW_012005268v1 5471439 84 + 7714307 -----------------tgaggccgggcgcggtggctcacgcctgacatcccagtactttgggaggccaaggcgggcagatcacgaggtcaggagatcgag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277438 84 + 50890351 -----------------TTAggccaggtgcagtggctcacgcccataaccccagcactttgggaggccaaggtgggcagatcacgaggtcaggagatcgag i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343693 84 + 4274983 -----------------TTAggccaggcgtggtggctcacgcccggaatcccagcactttgggaggccaaggcgggcagatcccgaggtcaggagatcgag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28575095 81 + 49145316 --------------------ggccgggtgcagtgactcacacctgtaatcccagcactttgggaggccgaggtgggtgaatcacaaggtcaggagttcaag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5419388 48 + 8899380 ---------------------------------aAttaaaaattaaaa----aaaaaaataaaaaGC-------AGTGACTT---------ggggtttgag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1628458 81 - 2680843 --------------------ggccgagtgcagtgattcacacctgtaatcccagcactttgggaggccaaggtgagcagatgacaaggtcaggagttcaag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 375921 81 - 4471408 --------------------ggctgggtgcagtgactcacacctgtaatcccagcactttgagaggccgaggtgggcagatcacaaggtcaggagttcaag i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350253 1 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e canFam3.chr1 4622630 253 - 122678785 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I a score=199499.000000 s hg38.chr19_GL383574v1_alt 84803 26 + 155864 accatcctggccaacatggtgaaacc s panTro5.chr19 36153357 26 + 61309027 accatcctggccaacatggtgaaacc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899565 26 + 64411610 accatcctggccaacatggtgaaacc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317125 26 - 8369475 accatcctggccaacatggtgaaacc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910389 26 - 106955855 accatcctgaccaacatggtgaaacc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30221384 26 + 53671032 accatcctggccaacatggtgaaacc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34674839 26 + 59248254 accatcctggccaacatggtgaaacc i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5471523 26 + 7714307 accatcctggccaacatggtgaaacc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277522 26 + 50890351 accatcctggccaacatggtgaaacc i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343777 26 + 4274983 accatcctggccaacatggtgaaacc i colAng1.NW_012111697v1 C 0 I 41 s calJac3.chr22 28575176 26 + 49145316 accagactggccaacatggtgaaacc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5419436 26 + 8899380 attaatctggccaacatagtgaaacc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1628539 26 - 2680843 accagactggccaacatggtgaaatt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 376002 26 - 4471408 accagactggccaacatggtgaaacc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350253 1 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e canFam3.chr1 4622630 253 - 122678785 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I a score=468708.000000 s hg38.chr19_GL383574v1_alt 84829 85 + 155864 tctgtctctact---aaaaat-acaaaaattagctgggcatggt-ggcaca-------------tgcctgtaatcccagctactggggaggctgaggcaggag s panTro5.chr19 36153383 85 + 61309027 tctgtctctact---aaaaat-acaaaaattagctgggcatggt-ggcgta-------------tacctgtaatcccagctactcgggaggctgaggcaggag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899591 85 + 64411610 tctgtctctact---aaaaat-acaaaaattagctgggcatggt-ggcgta-------------tacctgtaatcccagctactcgggaggctgaggcaggag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317151 85 - 8369475 tctgtctctact---aaaaat-acaaaaattagctgggcatggt-ggcgca-------------tgcctgtaatcccagctacttgggaggctgaggcaggag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910415 86 - 106955855 cctgtctgtact---aaaaataacaaaaattagctgggcatggt-ggtgcg-------------tgcctgtaatcccagctacttgggaggctgaggcaggag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30221410 87 + 53671032 cctgtatctacc---aaaaatagaaaaaattagctgggcatggtgggcgtg-------------tgcctgtcatcccagctactcgggaggctgaggcaggag i rheMac8.chr19 C 0 I 1541 s macFas5.chr19 34674865 100 + 59248254 cctgtctctacc---aaaaatagaaaaaattagctgggcatggtgggcgtgtgcctgtcgctcatgcctgtcatcccagctactcgggaggctgaggcaggag i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5471549 87 + 7714307 cctgtctctacc---aaaagtagaaaaaattagcagggcatggtgggcgcg-------------tgcctgtcatcccagctactcgggaggctgaggcaggag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277548 86 + 50890351 cctgtctctacc---aaaaatagaaaaaattagctgggcatggt-ggcgcg-------------tgcctgtcatcccagctactcaggaggctgaggcaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28575202 85 + 49145316 -ccgtctctact--aaaaaat-acaaaaattcgctgggcgtggt-ggcatg-------------cccctgtagtcccagctacttgggaggctaaggcaggag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5419462 84 + 8899380 -ctgtctctact---aaaaat-acaaaatttagccaggtgtggt-ggtgtg-------------tgcctgtaatcccagctactcaagaggctgaggcaggag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1628565 87 - 2680843 -ccatctctactaaaaaaaat-acaaaaattagctgggtgtggt-ggtgtg-------------agcctgtagtcccagctacttgggaggctaaggcaggag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 376028 85 - 4471408 -ccgtctctact--aaaaaat-ataaaaattcgctgggcatggt-ggctca-------------tgcctgtaatcccagctacttgggaggctgaagcaggaa i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350253 1 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e canFam3.chr1 4622630 253 - 122678785 I e colAng1.NW_012111697v1 2343803 41 + 4274983 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I a score=358268.000000 s hg38.chr19_GL383574v1_alt 84914 66 + 155864 aatcgctt------gaacc-ccggaggcagatgttgcagtgagctgagatcacgccactgcactccagc------ctgg s panTro5.chr19 36153468 66 + 61309027 aatcgctt------gaacc-ccggaggcagatgttgcagtgagctgagatcacgccactgcactccagc------ctgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899676 66 + 64411610 aatcgctt------gaacc-ccggaggcagatgttgcagtgagctgagatcacgccactgcactccagc------ctgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317236 66 - 8369475 aattgctt------gaacc-ccggaggcagatgttgcagtgagctgagatcacgccactgcactccagc------ctgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910501 66 - 106955855 aatcgctt------gaacc-ctggaggcagatgttgcagtgagctgagatcacgccactgcactccagc------ctgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223038 62 + 53671032 aatcgctt------gaaccaccggag--agatgttgcagtgagc-gagatcgcgccactgca-tcca-c------ctgg i rheMac8.chr19 I 1541 C 0 s macFas5.chr19 34674965 65 + 59248254 aatcgctt------gaacc-ccggaggcagatgttgcagtgagctgagatcgcgccactgcactcca-c------ctgg i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5471636 65 + 7714307 aatggctt------gaacc-ccggaggcagatgttgcagtgagctgagatcacgccactgcactcca-c------ctgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277634 66 + 50890351 aatcgctt------gaaac-ccggaggcagatgttgcagtgagctgagatcgctccactgcactccagc------ctgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28575287 72 + 49145316 aattgctt------gaacc-cgggaggcggaggttgcagtgagccgagatcatgccactgcactccagcttggtgcctg i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5419546 66 + 8899380 aatcgtgt------gaatt-caagaggtggaggttgcagtgagcagagatcctgtcattgcactgcagc------ccgg i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107633v1 1628652 66 - 2680843 aattgctt------gaaca-cgggaggcggaggttgcagtgagccgagatcatgccactgcactccagc------ctgg i cebCap1.NW_016107633v1 C 0 I 634 s aotNan1.NW_018505377v1 376113 71 - 4471408 aattgcttggaccaggacc-cgggaggcggaggttgcag-gagccgagatcatgccactgcactccagt------ctgg i aotNan1.NW_018505377v1 C 0 I 949 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350253 1 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e canFam3.chr1 4622630 253 - 122678785 I e colAng1.NW_012111697v1 2343803 41 + 4274983 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I a score=17324.000000 s hg38.chr19_GL383574v1_alt 84980 13 + 155864 caac-------------------agagtgaga-- s panTro5.chr19 36153534 13 + 61309027 caac-------------------agagtgaga-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899742 23 + 64411610 CAACNNNNNNNNNNNNNNNNNNN----------- i panPan2.chr19 C 0 I 48 s gorGor5.CYUI01015150v1 6317302 13 - 8369475 caac-------------------agagtgaga-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910567 13 - 106955855 caac-------------------acagtgaga-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223100 13 + 53671032 caat-------------------agagtgaga-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675030 12 + 59248254 caat-------------------a-agtgaga-- i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5471701 13 + 7714307 cgat-------------------agagtgaga-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277700 13 + 50890351 cgat-------------------agagtgaga-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28575360 15 + 49145316 tgac-------------------agggtgagact i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5419613 13 + 8899380 tgac-------------------agtgcaaga-- i saiBol1.JH378197 I 1 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350253 1 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e canFam3.chr1 4622630 253 - 122678785 I e aotNan1.NW_018505377v1 376184 949 - 4471408 I e cebCap1.NW_016107633v1 1628718 634 - 2680843 I e colAng1.NW_012111697v1 2343803 41 + 4274983 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I a score=11334.000000 s hg38.chr19_GL383574v1_alt 84993 10 + 155864 ----ctctctctcT s panTro5.chr19 36153547 10 + 61309027 ----ctctctctct i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317315 10 - 8369475 ----ctctctctct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910580 9 - 106955855 ----ctctctctc- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223113 6 + 53671032 ----ctctct---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675042 6 + 59248254 ----ctctct---- i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5471714 6 + 7714307 ----ctctct---- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277713 6 + 50890351 ----ctctct---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28575375 6 + 49145316 ----ctgtct---- i calJac3.chr22 C 0 I 7 s saiBol1.JH378197 5419626 6 + 8899380 ----ctgtct---- i saiBol1.JH378197 C 0 I 1 s canFam3.chr1 4622883 10 - 122678785 ctctttctct---- i canFam3.chr1 I 253 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350253 1 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e aotNan1.NW_018505377v1 376184 949 - 4471408 I e cebCap1.NW_016107633v1 1628718 634 - 2680843 I e colAng1.NW_012111697v1 2343803 41 + 4274983 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I e panPan2.chr19 39899765 48 + 64411610 I a score=-34982.000000 s hg38.chr19_GL383574v1_alt 85003 19 + 155864 ----CAAAa-------------------------aataaata------a-ataaa s panTro5.chr19 36153557 19 + 61309027 ----caaaa-------------------------aaaaaaaa------a-aaaaa i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317325 20 - 8369475 ----caaaa-------------------------aaaaaaaa------attaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910589 13 - 106955855 -----aaaa-------------------------aaaaaaaa------a------ i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223119 5 + 53671032 ----caaaa---------------------------------------------- i rheMac8.chr19 C 0 I 3 s macFas5.chr19 34675048 5 + 59248254 ----caaaa---------------------------------------------- i macFas5.chr19 C 0 I 3 s cerAty1.NW_012005268v1 5471720 5 + 7714307 ----caaaa---------------------------------------------- i cerAty1.NW_012005268v1 C 0 I 3 s chlSab2.chr6 29277719 23 + 50890351 ----caaaaaataaataaataaataaa---------------------------- i chlSab2.chr6 C 0 I 4 s calJac3.chr22 28575388 19 + 49145316 ----aaaaa-------------------------aaaagaaaaagaaa------- i calJac3.chr22 I 7 C 0 s saiBol1.JH378197 5419633 13 + 8899380 ----aaaaa-------------------------aaaagaaa------------- i saiBol1.JH378197 I 1 C 0 s canFam3.chr1 4622893 24 - 122678785 cagataaaa------------------tctctttaaaaTGAT------------- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350253 1 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e aotNan1.NW_018505377v1 376184 949 - 4471408 I e cebCap1.NW_016107633v1 1628718 634 - 2680843 I e colAng1.NW_012111697v1 2343803 41 + 4274983 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I e panPan2.chr19 39899765 48 + 64411610 I a score=-315.000000 s hg38.chr19_GL383574v1_alt 85022 2 + 155864 --ta s panTro5.chr19 36153576 1 + 61309027 --t- i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317345 1 - 8369475 --t- i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30223127 1 + 53671032 --t- i rheMac8.chr19 I 3 I 4 s macFas5.chr19 34675056 1 + 59248254 --t- i macFas5.chr19 I 3 I 3 s cerAty1.NW_012005268v1 5471728 1 + 7714307 --t- i cerAty1.NW_012005268v1 I 3 I 3 s chlSab2.chr6 29277746 1 + 50890351 --t- i chlSab2.chr6 I 4 I 3 s colAng1.NW_012111697v1 2343844 1 + 4274983 --t- i colAng1.NW_012111697v1 I 41 I 3 s calJac3.chr22 28575407 1 + 49145316 --T- i calJac3.chr22 C 0 I 7 s canFam3.chr1 4622917 3 - 122678785 AAT- i canFam3.chr1 C 0 I 5 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350253 1 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e aotNan1.NW_018505377v1 376184 949 - 4471408 I e cebCap1.NW_016107633v1 1628718 634 - 2680843 I e saiBol1.JH378197 5419646 0 + 8899380 C e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I e nomLeu3.chr10 63910602 0 - 106955855 C e panPan2.chr19 39899765 48 + 64411610 I a score=341.000000 s hg38.chr19_GL383574v1_alt 85024 6 + 155864 aataaa s dasNov3.JH563638 350254 6 + 643850 AAGAAA i dasNov3.JH563638 I 1 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e chlSab2.chr6 29277747 3 + 50890351 I e canFam3.chr1 4622920 5 - 122678785 I e aotNan1.NW_018505377v1 376184 949 - 4471408 I e cebCap1.NW_016107633v1 1628718 634 - 2680843 I e saiBol1.JH378197 5419646 0 + 8899380 C e calJac3.chr22 28575408 7 + 49145316 I e colAng1.NW_012111697v1 2343845 3 + 4274983 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e cerAty1.NW_012005268v1 5471729 3 + 7714307 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I e macFas5.chr19 34675057 3 + 59248254 I e rheMac8.chr19 30223128 4 + 53671032 I e nomLeu3.chr10 63910602 0 - 106955855 C e gorGor5.CYUI01015150v1 6317346 0 - 8369475 C e panPan2.chr19 39899765 48 + 64411610 I e panTro5.chr19 36153577 0 + 61309027 C a score=2824.000000 s hg38.chr19_GL383574v1_alt 85030 8 + 155864 taaaAATT--- s panTro5.chr19 36153577 8 + 61309027 taaaaatt--- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899813 8 + 64411610 taaaaatt--- i panPan2.chr19 I 48 C 0 s gorGor5.CYUI01015150v1 6317346 8 - 8369475 taaaaaTT--- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910602 7 - 106955855 -aaaaatt--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223132 5 + 53671032 ---taaat--- i rheMac8.chr19 I 4 C 0 s macFas5.chr19 34675060 5 + 59248254 ---taaat--- i macFas5.chr19 I 3 C 0 s cerAty1.NW_012005268v1 5471732 5 + 7714307 ---taaat--- i cerAty1.NW_012005268v1 I 3 C 0 s chlSab2.chr6 29277750 5 + 50890351 ---taaat--- i chlSab2.chr6 I 3 C 0 s colAng1.NW_012111697v1 2343848 5 + 4274983 ---taaat--- i colAng1.NW_012111697v1 I 3 C 0 s calJac3.chr22 28575415 7 + 49145316 -AAAAAAT--- i calJac3.chr22 I 7 I 2 s canFam3.chr1 4622925 7 - 122678785 -TAAAAAT--- i canFam3.chr1 I 5 I 8 s dasNov3.JH563638 350260 8 + 643850 ---CAACTTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e aotNan1.NW_018505377v1 376184 949 - 4471408 I e cebCap1.NW_016107633v1 1628718 634 - 2680843 I e saiBol1.JH378197 5419646 0 + 8899380 C e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I a score=113994.000000 s hg38.chr19_GL383574v1_alt 85038 15 + 155864 ----AAAAA----GCAGTGACCT s panTro5.chr19 36153585 15 + 61309027 ----aaaaa----GCAGTGACCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899821 15 + 64411610 ----aaaaa----GCAGTGACCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317354 15 - 8369475 ----AAAAA----GCAGTGACCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910609 15 - 106955855 ----aaaaa----GCAGTGACct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223137 15 + 53671032 ----aaaaa----gcagtgacct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675065 15 + 59248254 ----gaaaa----GCAGTGACCT i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5471737 15 + 7714307 ----aaaaa----gcagtgacct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277755 15 + 50890351 ----aaaAA----GCAGTGACCT i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343853 15 + 4274983 ----aaaaa----GCAGTGACCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28575424 15 + 49145316 ----TAAAA----GCAGTGACTT i calJac3.chr22 I 2 I 1356 s saiBol1.JH378197 5419646 14 + 8899380 -----aaaa----GCAGTGACCT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 377133 15 - 4471408 ----aaaaa----GCAGTGACCT i aotNan1.NW_018505377v1 I 949 C 0 s canFam3.chr1 4622940 19 - 122678785 ----AAAAATAGTACAGTGATCT i canFam3.chr1 I 8 C 0 s dasNov3.JH563638 350268 19 + 643850 AAAAAACAA----GAAACGACCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e cebCap1.NW_016107633v1 1628718 634 - 2680843 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I a score=94558.000000 s hg38.chr19_GL383574v1_alt 85053 14 + 155864 AACCCATTCCCTTC s panTro5.chr19 36153600 14 + 61309027 AACCCATTCCCTTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899836 14 + 64411610 AACCCATTCCCTTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317369 14 - 8369475 AACCCATTCCCTTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910624 14 - 106955855 aacccattcccttc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223152 14 + 53671032 aacccattcccttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675080 14 + 59248254 AACCCATTCCCTTT i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5471752 14 + 7714307 aacccattcccttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277770 14 + 50890351 AACCCATTCCCTTT i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343868 14 + 4274983 AACCCATTCCCTTT i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5419660 14 + 8899380 AACTCATTCCCTTC i saiBol1.JH378197 C 0 I 307 s aotNan1.NW_018505377v1 377148 14 - 4471408 AACCCATTCCCttc i aotNan1.NW_018505377v1 C 0 I 299 s canFam3.chr1 4622959 13 - 122678785 -AACCACTCCATTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 350287 14 + 643850 AACTAGTTCCCTGC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e cebCap1.NW_016107633v1 1628718 634 - 2680843 I e calJac3.chr22 28575439 1356 + 49145316 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I a score=124355.000000 s hg38.chr19_GL383574v1_alt 85067 28 + 155864 CTTAGTAACTGTTTTTA--GCCTGGTGCAG- s panTro5.chr19 36153614 28 + 61309027 CTTAGTAACTGTTTTTA--GCCTGGTGCAG- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899850 28 + 64411610 CTTAGTAACTGTTTTTA--GCCTGGTGCAG- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317383 28 - 8369475 CTTAGTAACTGTTTTTA--GCCTGGTGCAG- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910638 28 - 106955855 cttaataactgttttta--gcctggtgcag- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223166 29 + 53671032 cttagtaa-tgtttttaccggctggtgcag- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675094 28 + 59248254 CTTAGTAACTGTTTTTA--GCCTGGTGCAG- i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5471766 28 + 7714307 cttagtaactgttttta--gcttggtgtag- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277784 28 + 50890351 CTTAGTAACTGTTTTTA--GCCTGGTGCAG- i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343882 28 + 4274983 CTTCATAACTGTTTTTA--GCCTGGTGCAg- i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4622972 28 - 122678785 CTCAGTAACTGTTCTTA--CCCTGGTACAA- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 350301 28 + 643850 -TCAGCAACTGTTGTCA--GCCTCATGGCAC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102437 72 - 145441459 I e aotNan1.NW_018505377v1 377162 299 - 4471408 I e cebCap1.NW_016107633v1 1628718 634 - 2680843 I e saiBol1.JH378197 5419674 307 + 8899380 I e calJac3.chr22 28575439 1356 + 49145316 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I a score=72718.000000 s hg38.chr19_GL383574v1_alt 85095 16 + 155864 AACTCCA-GGTCCAGAA s panTro5.chr19 36153642 16 + 61309027 AACTCCA-GGTACAGAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899878 16 + 64411610 AACTCCA-GGTACAGAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317411 16 - 8369475 AACTGCA-GGTCCAGAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910666 16 - 106955855 aactcca-ggtccagaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223195 17 + 53671032 aactccagggtctagaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675122 16 + 59248254 AACTCCA-GGTCTAGAA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5471794 16 + 7714307 aactgca-gttccagaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277812 16 + 50890351 AACTCCA-GGTCCAGAA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343910 16 + 4274983 aactcca-ggtccagaa i colAng1.NW_012111697v1 C 0 C 0 s mm10.chr7 111102509 16 - 145441459 AACTCCG-GGTCTGGGA i mm10.chr7 I 72 C 0 s canFam3.chr1 4623000 16 - 122678785 ATCTCCA-GGTCAGAGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 350329 16 + 643850 ACTTCCA-AATCGGAGA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e aotNan1.NW_018505377v1 377162 299 - 4471408 I e cebCap1.NW_016107633v1 1628718 634 - 2680843 I e saiBol1.JH378197 5419674 307 + 8899380 I e calJac3.chr22 28575439 1356 + 49145316 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I a score=10920.000000 s hg38.chr19_GL383574v1_alt 85111 1 + 155864 T s panTro5.chr19 36153658 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899894 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317427 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910682 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223212 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675138 1 + 59248254 T i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5471810 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29277828 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343926 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28576795 1 + 49145316 T i calJac3.chr22 I 1356 C 0 s saiBol1.JH378197 5419981 1 + 8899380 T i saiBol1.JH378197 I 307 C 0 s aotNan1.NW_018505377v1 377461 1 - 4471408 T i aotNan1.NW_018505377v1 I 299 C 0 s mm10.chr7 111102525 1 - 145441459 T i mm10.chr7 C 0 C 0 s canFam3.chr1 4623016 1 - 122678785 T i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 350345 1 + 643850 T i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e cebCap1.NW_016107633v1 1628718 634 - 2680843 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I a score=991808.000000 s hg38.chr19_GL383574v1_alt 85112 125 + 155864 C-TTTATACTTTCTCCGGCTTCATTAGTTccccc-------gtgctttctccaccgcca-tctccaaccatcctaaactccatgactcactcttcatttatcttgcaaataccctaaactcctttgcttc-tctt s panTro5.chr19 36153659 125 + 61309027 C-TTTATACTTTCTCCAGCTTCATTAGTTccctc-------ttgctttctccaccgcca-tctccaaccatcctaaactccatgactcactcttcatttatcttgcaaataccctaaactcctttgcttc-tctt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39899895 125 + 64411610 C-TTTATACTTTCTCCAGCTTCATTAGTTccctc-------ttgctttctccaccgcca-tctccaaccatcctaaactccatgactcactcttcatttatcttgcaaataccctaaactcctttgcttc-tctt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317428 125 - 8369475 C-TTTATACTTTCTCCGGCTTCATTAGTTccctc-------ttgctttctccaccgcca-tctccaaccagcctaaactccatgactcactcttcatttatcttgcaaacaccctaaactcctttgcttc-tctt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910683 125 - 106955855 c-tttatactttctccggcttcattagttccctc-------ttgctttccccgccgcca-tctccaaccagtctaaactccatgactcactcttcatttatcttgcaaacaccctaaactcctttgcttc-tctt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223213 122 + 53671032 cttttatactttctctgactttattagtt-cctc-------ttgcttt-cccacc-cca-tccccaagcagcctaaa-tccgtgactcactcctca-ttatcttgcaaacaccctaaacccccttgcctcatctt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675139 125 + 59248254 C-TTCATACTTTCTCTGACTTTATTAGTTccctc-------ttgctttccccaccacca-tctccaagcagcctaaactccgtgactcactcctcatttatcttgtaaacaccctaaactcccttgcttc-tctt i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5471811 125 + 7714307 c-ttcatactttctctgacttcattagttccctc-------ttgctttccccaccacca-tctccaagcagcctaaactccgtgactcactcctcatttatcttgcaaacaccctaaactcccttgcttc-tctt i cerAty1.NW_012005268v1 C 0 I 798 s chlSab2.chr6 29277829 125 + 50890351 C-TTTATACTTTCTCTGACTTCATTAGTTccctc-------ttgctttccccaccacca-tctccaaccagcctaaactccgtgactcactcctcatttatcttgcaaacaccctaaactcccttgcttc-tctt i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2343927 125 + 4274983 c-tttatactttctctgactccattagttccctc-------ttgctttccccaccaccg-tctccaagcagcctaaactccatgactcactcctcatttatcttgcaaacaccctaaactcccttgcttc-tctt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28576796 125 + 49145316 C-TTTATAATTTCTCCTGATTGATTAGTTccctc-------ttgctttcccctccacca-tctccaaccagcctaaattccatgactcactcgtcatttatcttacaaacaccctaaactcccttgcctc-tctt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5419982 125 + 8899380 C-TTTATACTTTCTCTTGATTGATTAGTTccccc-------ttgctttccccaccacca-tctccaaccagcctaaattccatgactcactcatcatttatctggcaaacaccctaaactcccttgcctc-tctt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1629352 123 - 2680843 C-TTTATACTTTCTCCTGATTGATTAG--ccctc-------ttgctttccccaccacca-tctccaaccagactaaatttcatgattcactcgtcatttatcttgcaaacaccctaaactcccttgcctc-tctt i cebCap1.NW_016107633v1 I 634 C 0 s aotNan1.NW_018505377v1 377462 125 - 4471408 C-TTTATACTTTCTCCTGATTGATTAGTTccctc-------ttgctttccccaccacca-tctccaaccagcctaaattccatgactcactcatcatttatcttgcaaacaccctaaactcctttgcctc-tctt i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111102526 108 - 145441459 C-TTT---CTTTCTC-GACTTTATGAGCTTCTTCC-----TTTCTGTTCCTCCCTGCCAGTCTCCAGCCAGCCCAGACATCATAATCCA----TCATTTATATTGCAGATACTCTGAAGTCC------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4623017 109 - 122678785 C-TTTCTACTTT----GGATTTATTGAGCTCCTCCTTTCTTTTGCTTTCCCCACCACCG--------------GAGGCTCCATGATCCA----TCATTTATCTTGCAATTACCCTAAGCCCCCTTTACAC-CT-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 350346 115 + 643850 C-ATTCTGGTTTCTATGGATTCATCAGCCCTCTC-------CT-TTTGCTGCCCCACCA-TTTCCAAACAACCTAGACTCCATGAC-----CATCA-TTATTTTACCAATTCCTTAAACTCCCTTACTTC-T--- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I a score=43043.000000 s hg38.chr19_GL383574v1_alt 85237 5 + 155864 ttgag s panTro5.chr19 36153784 5 + 61309027 ttgag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900020 5 + 64411610 ttgag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317553 5 - 8369475 ttgag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910808 5 - 106955855 ttgag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223335 5 + 53671032 ttgag i rheMac8.chr19 C 0 I 478 s macFas5.chr19 34675264 5 + 59248254 ttgag i macFas5.chr19 C 0 I 327 s chlSab2.chr6 29277954 5 + 50890351 ttgag i chlSab2.chr6 C 0 I 6 s colAng1.NW_012111697v1 2344052 5 + 4274983 ttgag i colAng1.NW_012111697v1 C 0 I 6 s calJac3.chr22 28576921 5 + 49145316 ttgag i calJac3.chr22 C 0 I 6 s saiBol1.JH378197 5420107 5 + 8899380 ttgag i saiBol1.JH378197 C 0 I 6 s cebCap1.NW_016107633v1 1629475 5 - 2680843 ttgag i cebCap1.NW_016107633v1 C 0 I 6 s aotNan1.NW_018505377v1 377587 5 - 4471408 ttgag i aotNan1.NW_018505377v1 C 0 I 6 s canFam3.chr1 4623126 5 - 122678785 TTGAG i canFam3.chr1 C 0 I 6 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350461 0 + 643850 C e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102634 0 - 145441459 C e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e cerAty1.NW_012005268v1 5471936 798 + 7714307 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I a score=200339.000000 s hg38.chr19_GL383574v1_alt 85242 29 + 155864 aagctcctgcctagagaaacttcaaccc-t s panTro5.chr19 36153789 29 + 61309027 aagctcctgcctagagaaacttcaaccc-t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900025 29 + 64411610 aagctcctgcctagagaaacttcaaccc-t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317558 29 - 8369475 aagctcctgcctagagaaacttcaaccc-t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910813 30 - 106955855 aagctcctgcctagagaaacttcaaccctt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34675596 29 + 59248254 atgctcctgcctagagaaacttcaaccc-t i macFas5.chr19 I 327 C 0 s chlSab2.chr6 29277965 29 + 50890351 atgctcctgcctagagaaacttcaaccc-t i chlSab2.chr6 I 6 I 434 s colAng1.NW_012111697v1 2344063 29 + 4274983 atgctcctgcctagagaaacttcaacct-t i colAng1.NW_012111697v1 I 6 C 0 s calJac3.chr22 28576932 29 + 49145316 atgctcctgcctagagaaacttcaaccc-t i calJac3.chr22 I 6 C 0 s saiBol1.JH378197 5420118 29 + 8899380 atgctcctgcctagagaaacttcaaccc-t i saiBol1.JH378197 I 6 C 0 s cebCap1.NW_016107633v1 1629486 29 - 2680843 atgctcctgcctagagaaacttcaaccc-t i cebCap1.NW_016107633v1 I 6 C 0 s aotNan1.NW_018505377v1 377598 29 - 4471408 atgctcctgtctagagaaacttcaaccc-t i aotNan1.NW_018505377v1 I 6 C 0 s canFam3.chr1 4623137 29 - 122678785 CTGCTCCTGCCTAGAGGAGCTTCAACTC-T i canFam3.chr1 I 6 C 0 s dasNov3.JH563638 350461 19 + 643850 --------GCCTGAA--AACTTCAATCC-T i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102634 0 - 145441459 C e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e cerAty1.NW_012005268v1 5471936 798 + 7714307 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I e rheMac8.chr19 30223340 478 + 53671032 I a score=485724.000000 s hg38.chr19_GL383574v1_alt 85271 86 + 155864 aaaagcatccattcatccacat--tgtcaatgtcttcacccagggggttgagtcctgaggacaagaatcacagttga------------gcaaatcaatg s panTro5.chr19 36153818 86 + 61309027 aaaagcatccattcatccacat--tgtcaatgtcttcacccagggggttgagtcctgaggacaagaatcacagttga------------gcaaatcaatg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900054 86 + 64411610 aaaagcatccattaatccacat--tgtcaatgtcttcacccagggggttgagtcctgaggacaagaatcacagttga------------gcaaatcaatg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317587 86 - 8369475 aaaagcatccattcatccacat--tgtcaatgtcttcacccagggggttgagtcctgaggacaagaatcacagttga------------gcaaatcaatg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910843 86 - 106955855 aaaagcatccattcatccacat--tgtcaatgtcttcacccagggggttgagtcctgaggacaagaatcacagttga------------gcaaattaatg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34675625 85 + 59248254 gaaagcat-cattcatccacat--tgtcaatgtcttcacccagaggattgagtcctgaggacaagaatcacagttga------------gcaaattaatg i macFas5.chr19 C 0 C 0 s colAng1.NW_012111697v1 2344092 86 + 4274983 gaaagcatccattcatccacat--tgtcaatgtcttcacccagaggattgagtcctgaggacaagaatcacagctga------------gcaaattaatg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28576961 86 + 49145316 gaaagcatcccttcatccacat--tgtcagtgtcttcacccagggggttgaggcctgaggacgagaatcacagttga------------gcaacttagtg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5420147 86 + 8899380 gaaagcatccattcatccacgt--tgtcagtgtcttcacgcagggggttgaggcctgaggacgagaatcacagttca------------gcaacttagtg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1629515 86 - 2680843 caaagcatccattcatccacgt--tgtcagtgtcttcacccagggggttgaggcctgaggacgagaatcacagttga------------gcaacttagtg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 377627 86 - 4471408 gaaagcatccattcatccacat--tgtcagtatcttcacccagggagttgaggcctgaggatgagaatcacagttga------------gcaacttagtg i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111102634 70 - 145441459 ---------CACTTGTCTATAC--AGTCAC--TCTTCACCTAGAAGG-----------------GAATCATAGTTGAAgggtggggggtgcagcttaatg i mm10.chr7 C 0 I 126 s canFam3.chr1 4623166 69 - 122678785 GAAAGCATCCATCCTTTCACAC--TGTC--CGTATTCACCCAGAGGGTTGAG---------------TCACAATTGA------------GTAAATGAGTA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 350480 87 + 643850 AAAAGCATCCACCTACCCATACGGTGTAAAAGTCTTCACACAGAGGGTTGAGTCCTGTAGGAGAGAATCACAGTTGA------------G-AAATTAGTA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e chlSab2.chr6 29277994 434 + 50890351 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e cerAty1.NW_012005268v1 5471936 798 + 7714307 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I e rheMac8.chr19 30223340 478 + 53671032 I a score=183981.000000 s hg38.chr19_GL383574v1_alt 85357 51 + 155864 ccactgtaaataatgctgattactaccct-caac---cttggccctcaaCTTTGT s panTro5.chr19 36153904 51 + 61309027 ccactgtaaataatgctgattactaccct-ctac---cttggccctcaaCTTTGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900140 51 + 64411610 ccactgcaaataatgctgattactaccct-ctac---cttggccctcaactttgt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317673 51 - 8369475 ccactgtaaataatgctgattactaccct-taac---cttggccctcaactttgt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910929 47 - 106955855 ccactg----taatgccgattactaccct-caac---cttggccctcaactttgc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34675710 37 + 59248254 ccactg----taattctgattactaccct-caac---cttggccc---------- i macFas5.chr19 C 0 C 0 s colAng1.NW_012111697v1 2344178 47 + 4274983 ccactg----taattctgattactaccct-caac---cttcgccctgaactttgc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577047 48 + 49145316 ccactg----taattctgatccctaccctccaac---cttggccctcaactttgc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5420233 47 + 8899380 ccactg----taattctgatccctaccct-caac---cttggccctcaactttgc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1629601 47 - 2680843 ccactg----taattctgatccctaccct-caac---cttggtcctcaactttgc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 377713 47 - 4471408 tcactg----taattctgatccctaccct-caac---cttggccctcaactttgc i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4623235 48 - 122678785 CAACCG----TAAAAC--ATTACTGCTCT-CTGTCTGCTGGGCCCTCAACATTGC i canFam3.chr1 C 0 I 182 s dasNov3.JH563638 350567 24 + 643850 CCAC------TAATTCTGATTTCCAGCTT-C------------------------ i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102704 126 - 145441459 I e chlSab2.chr6 29277994 434 + 50890351 I e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e cerAty1.NW_012005268v1 5471936 798 + 7714307 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I e rheMac8.chr19 30223340 478 + 53671032 I a score=55293.000000 s hg38.chr19_GL383574v1_alt 85408 73 + 155864 ATATTTATACCT-CAACCAGGTATATTTCTTTG----TATATATATACCTCAACCAGGTGTATTTCTGTAATCACTGT s panTro5.chr19 36153955 73 + 61309027 ATATTTATACCT-CAACCAGGTATATTTCTTTG----TGTATATATACCTCAACCAGGTATATTTCTGTAATCACTGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900191 73 + 64411610 atatttatacct-caaccaggtatatttctttg----tgtatatatacctcaaccaggtatatttctgtaatcactgt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317724 77 - 8369475 atatttatacct-caaccaggtatatttctttgtatatatatatatacctcaaccaggtatatttctgtaatcgctgt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63910976 33 - 106955855 ---------cat-caa-----------------------------------aaccaggtatatttctgtaatcACTGT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28577095 34 + 49145316 ---------cATCCAA-----------------------------------AGCCGGGTATATTTCTGTAATCACTGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5420280 33 + 8899380 ---------cAT-CAA-----------------------------------AACCGGGTATATTTCTGTAATCACTGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1629648 33 - 2680843 ---------cAT-CAA-----------------------------------AACTGGGTACATTTCTGTCATCACTGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 377760 33 - 4471408 ---------cat-caa-----------------------------------aaccaggtatatttctgtaatcACTGG i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 350591 6 + 643850 ------------------------------------------------------------------------TACTGG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102704 126 - 145441459 I e chlSab2.chr6 29277994 434 + 50890351 I e canFam3.chr1 4623283 182 - 122678785 I e colAng1.NW_012111697v1 2344225 0 + 4274983 C e manLeu1.NW_012102454v1 902247 1791 - 2385121 I e cerAty1.NW_012005268v1 5471936 798 + 7714307 I e macNem1.NW_012011689v1 4541561 943 - 13342542 I e macFas5.chr19 34675747 0 + 59248254 C e rheMac8.chr19 30223340 478 + 53671032 I a score=190792.000000 s hg38.chr19_GL383574v1_alt 85481 23 + 155864 GCCCTTAACTTTG-CATCAAAACC s panTro5.chr19 36154028 23 + 61309027 GCCCTTAACTTTG-CATCAAAACC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900264 23 + 64411610 gcccttaactttg-catcaaaacc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317801 23 - 8369475 gcccttaactttg-catcaaaact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911009 23 - 106955855 GCCCCTAACTTTG-CATCAAAACC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223818 24 + 53671032 gccctgaactttgccatcaaaacc i rheMac8.chr19 I 478 C 0 s macFas5.chr19 34675747 20 + 59248254 ----tgaactttgccatcaaaacc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4542504 24 - 13342542 gccctgaactttgccatcaaaacc i macNem1.NW_012011689v1 I 943 C 0 s cerAty1.NW_012005268v1 5472734 24 + 7714307 gccctgaactttgccatcgaaacc i cerAty1.NW_012005268v1 I 798 C 0 s chlSab2.chr6 29278428 24 + 50890351 gccctgaactttgccatcaaaacc i chlSab2.chr6 I 434 C 0 s manLeu1.NW_012102454v1 904038 24 - 2385121 GCCCTGAACTTTGCCATCAAAACC i manLeu1.NW_012102454v1 I 1791 C 0 s colAng1.NW_012111697v1 2344225 10 + 4274983 --------------catcaaaacc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577129 24 + 49145316 GCCCTCAACCTTGCCATCAAAACT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5420313 24 + 8899380 GCCCTCAATCTTGCCATCAAAACT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1629681 24 - 2680843 GCCCTCAACCTTGCCATAAAAACT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 377793 24 - 4471408 GCCCTCAACCTTGCCATCAAAACT i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 350597 23 + 643850 GCCCTCAACA-TGCCAACAAAACT i dasNov3.JH563638 C 0 I 1 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102704 126 - 145441459 I e canFam3.chr1 4623283 182 - 122678785 I a score=308.000000 s hg38.chr19_GL383574v1_alt 85504 3 + 155864 A-GT s panTro5.chr19 36154051 3 + 61309027 A-GT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900287 3 + 64411610 a-gt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317824 3 - 8369475 a-gt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911032 3 - 106955855 A-GT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223842 4 + 53671032 aggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675767 4 + 59248254 aggt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4542528 4 - 13342542 aggt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5472758 4 + 7714307 aggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29278452 4 + 50890351 aggt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 904062 4 - 2385121 AGGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2344235 4 + 4274983 aggt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577153 3 + 49145316 G-GT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5420337 3 + 8899380 G-GT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1629705 3 - 2680843 G-GT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 377817 3 - 4471408 G-GT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4623465 3 - 122678785 -AGT i canFam3.chr1 I 182 C 0 s dasNov3.JH563638 350621 3 + 643850 -AGT i dasNov3.JH563638 I 1 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102704 126 - 145441459 I a score=19510.000000 s hg38.chr19_GL383574v1_alt 85507 3 + 155864 --ATA s panTro5.chr19 36154054 3 + 61309027 --ATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900290 3 + 64411610 --ata i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317827 3 - 8369475 --ata i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911035 3 - 106955855 --ATA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223846 3 + 53671032 --ata i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675771 3 + 59248254 --ata i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4542532 3 - 13342542 --ata i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5472762 3 + 7714307 --ata i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29278456 3 + 50890351 --ata i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 904066 3 - 2385121 --ATA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2344239 3 + 4274983 --ata i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577156 3 + 49145316 --ATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5420340 3 + 8899380 --ATA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1629708 3 - 2680843 --GTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 377820 3 - 4471408 --ATA i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111102830 3 - 145441459 --ATA i mm10.chr7 I 126 C 0 s canFam3.chr1 4623468 2 - 122678785 ---TC i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 350624 3 + 643850 TCA-- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587302 377 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I a score=739183.000000 s hg38.chr19_GL383574v1_alt 85510 50 + 155864 TTTCTGTAATCAT--CTCTCTGCAGTCAGCAAGTGGTCTTACCATCTATTTC s panTro5.chr19 36154057 50 + 61309027 TTTCTGTAATCAT--CTCTCTGCAGTCAGCAAGTGGTCTTGCCATCTATTTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900293 50 + 64411610 tttctgtaatcat--ctctctgcagtcagcaagtggtcttgccatctatttc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317830 50 - 8369475 tttctgtaatcat--ctttctgcagtcagcaagtggtcttgccatctatttc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911038 50 - 106955855 TTTCTGTAATCAT--CTCTCTGCAGTCAGCAAGTGGTCTTGCCATCTATTTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223849 50 + 53671032 tttctgtaatcAC--CTCTCTGCAGTCAGCAAGTGCTCTTGCCATCTATTTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675774 50 + 59248254 tttctgtaatcAC--CTCTCTGCAGTCAGCAAGTGCTCTTGCCATCTATTTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4542535 50 - 13342542 tttctgtaatcAC--CTCTCTGCAGTCAGCAAGTGCTCTTGCCATCTATTTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5472765 50 + 7714307 tttctgtaatcAC--CTCTCTGCAGTCAGCAAGTGCTCTTGCCATCTATTTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29278459 50 + 50890351 tttctgtaatcAC--CTCTCTGCAGTCAGCAAGTGCTCTTGCCATCTATTTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 904069 50 - 2385121 TTTCTGTAATCAC--CTCTCTGCAGTCAGCAAGTGCTCTTGCCATCTATTTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2344242 50 + 4274983 tttctgtaatcAC--CTCTCTGCAGTCAGCAAGTGCTCTTGCCATCTATTTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577159 49 + 49145316 TTTCTATAATCA---CTCTCTGCAGTCAGCAAGTGGTCTTGCCATCTATTTC i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5420343 50 + 8899380 TTTCTATAATCAC--CTCTCTGCAGTCAGCAAGTGGTCTTGCCCTCTATTTC i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107633v1 1629711 50 - 2680843 TTTCTATAATCAC--CTCTCTGCAGTCAGCAAGTGGTCTTGCCCTCTGtttc i cebCap1.NW_016107633v1 C 0 I 1067 s aotNan1.NW_018505377v1 377823 50 - 4471408 TTTCTATAATCAC--CTCTCTGCAGTCAGCAAGTGGTCTTGCCATCTATTTC i aotNan1.NW_018505377v1 C 0 I 1 s proCoq1.NW_012149263v1 587679 50 + 2501019 TTTCTGTACTCAT--CTCTGTGCAGTCAGAAGGTGGTCTTGCCATCTATTTC i proCoq1.NW_012149263v1 I 377 C 0 s mm10.chr7 111102833 50 - 145441459 TTTGTGTAATCAC--CTCTCTGCAGACAGCAAGTGGTCTGACCAGCGACTTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4623471 50 - 122678785 CTTCTTTAATCAC--CTCTTTCCAAGCAACAAAAGGCCTTGCTGTCTGTTTC i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 350627 52 + 643850 TTTCTGTAATCACCTCTCTCTCTGGTCAGCAAATGTCCTTGCCATCTATTTC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I a score=67200.000000 s hg38.chr19_GL383574v1_alt 85560 5 + 155864 AAAGA s panTro5.chr19 36154107 5 + 61309027 AAAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900343 5 + 64411610 aaaga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317880 5 - 8369475 aaaga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911088 5 - 106955855 AAAGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223899 5 + 53671032 AAAGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675824 5 + 59248254 AAAGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4542585 5 - 13342542 AAAGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5472815 5 + 7714307 AAAGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29278509 5 + 50890351 AAAGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 904119 5 - 2385121 AAAGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2344292 5 + 4274983 AAAGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577209 5 + 49145316 AAGAA i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5420394 5 + 8899380 AAGAA i saiBol1.JH378197 I 1 C 0 s aotNan1.NW_018505377v1 377874 5 - 4471408 AAGAA i aotNan1.NW_018505377v1 I 1 C 0 s proCoq1.NW_012149263v1 587729 5 + 2501019 AAAGA i proCoq1.NW_012149263v1 C 0 I 2371 s mm10.chr7 111102883 5 - 145441459 AAAGA i mm10.chr7 C 0 C 0 s canFam3.chr1 4623521 5 - 122678785 AAAGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 350679 5 + 643850 AAAGA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e cebCap1.NW_016107633v1 1629761 1067 - 2680843 I a score=383810.000000 s hg38.chr19_GL383574v1_alt 85565 41 + 155864 CAGCTGGTGGCTGTTGGATGAAAACAGTTTCAGACGCTTAC-- s panTro5.chr19 36154112 41 + 61309027 CAGCTGGTGGCTGTTGGATGAAAACAGTTTCAGACGCTTAC-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900348 41 + 64411610 cagctggtggctgttggatgaaaacagtttcagacgcttac-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317885 41 - 8369475 cagctggtggctgttggatgaaaacagtttcagatgcttac-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911093 41 - 106955855 CAGCTGGTGGCTGTTGAATGAAAACAGTTTCAGACGCTTAC-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223904 41 + 53671032 CAACTGGTGGCTGTGGGATGAAAACAGTTTCAGACGCTTAC-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675829 41 + 59248254 CAACTGGTGGCTGTGGGATGAAAACAGTTTCAGACGCTTAC-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4542590 41 - 13342542 CAACTGGTGGCTGTGGGATGAAAACAGTTTCAGATGCTTAC-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5472820 41 + 7714307 CAACTGGTGGCTGTGGGATGAAAACAGTTTCAGACGCTTAC-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29278514 41 + 50890351 CAACTGGTGGCTGTGGGATGAAAACAGTTTCAGACGCTTAC-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 904124 41 - 2385121 CAACTGGTGGCTGTGGGATGAAAACAGTTTCAGACGCTTAC-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2344297 41 + 4274983 CAACTGGTGGCTGTTGGATGAAAACAGTTTCAGACGCTTAC-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577214 41 + 49145316 GAGCTGGTGGCTGTTGGATGGAAACAGTTTCAGACACTTAA-- i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5420399 41 + 8899380 GAGCTGGTGGCTGTTGGATGGAAACAGTTTCAGACACTTAA-- i saiBol1.JH378197 C 0 I 365 s aotNan1.NW_018505377v1 377879 41 - 4471408 GAGCTGGTGGCTGTTGGATGGAAACCATTTCAGACACTTAA-- i aotNan1.NW_018505377v1 C 0 I 1 s mm10.chr7 111102888 31 - 145441459 GAACTGAAAGCTATCTGACAGAGACTGCCCC------------ i mm10.chr7 C 0 C 0 s canFam3.chr1 4623526 41 - 122678785 GAACTAGAGGACATTGCATGGAAACTGCTCCCATTGCTTAC-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 350684 43 + 643850 TAAGTAGCGGCCATTGGATGGGAGTTGTCTCGAACAACTCTAC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e cebCap1.NW_016107633v1 1629761 1067 - 2680843 I a score=13600.000000 s hg38.chr19_GL383574v1_alt 85606 1 + 155864 C s panTro5.chr19 36154153 1 + 61309027 C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900389 1 + 64411610 c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317926 1 - 8369475 c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911134 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223945 1 + 53671032 C i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675870 1 + 59248254 C i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4542631 1 - 13342542 C i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5472861 1 + 7714307 C i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29278555 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 904165 1 - 2385121 C i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2344338 1 + 4274983 C i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577256 1 + 49145316 C i calJac3.chr22 I 1 C 0 s aotNan1.NW_018505377v1 377921 1 - 4471408 C i aotNan1.NW_018505377v1 I 1 C 0 s mm10.chr7 111102919 1 - 145441459 C i mm10.chr7 C 0 C 0 s canFam3.chr1 4623567 1 - 122678785 C i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 350727 1 + 643850 C i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e cebCap1.NW_016107633v1 1629761 1067 - 2680843 I e saiBol1.JH378197 5420440 365 + 8899380 I a score=345474.000000 s hg38.chr19_GL383574v1_alt 85607 28 + 155864 ----ACACTCT-AAACCAGCCTCATCTGCA-TCC s panTro5.chr19 36154154 28 + 61309027 ----ACACTCT-AAACCAGCCTCATCTGCA-TCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900390 28 + 64411610 ----acactct-aaaccagcctcatctgca-tcC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317927 28 - 8369475 ----acactct-aaaccagcctcatctgca-tcC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911135 28 - 106955855 ----ACACTCT-AAACCAGCCTCATCTGCA-TCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223946 28 + 53671032 ----ACACTCT-AAACCAGCCTCATCTGCA-TCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675871 28 + 59248254 ----ACACTCT-AAACCAGCCTCATCTGCA-TCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4542632 28 - 13342542 ----ACACTCT-AAACCAGCCTCATCTGCA-TCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5472862 28 + 7714307 ----ACACTCT-AAACCAGCCTCATTTGCA-TCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29278556 28 + 50890351 ----ACACTCT-AAACCAGCCTCATCTGCA-TCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 904166 28 - 2385121 ----ACACTCT-AAACCAGCCTCATTTGCA-TCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2344339 29 + 4274983 ----ACACTCT-AAACCAGCCTCATCTGCATTCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577257 28 + 49145316 ----ACACTCT-AAATCAGCCTCATCTGCA-TCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5420805 28 + 8899380 ----ACACTCT-AAATCAGCCTCGTCTGCA-TCC i saiBol1.JH378197 I 365 C 0 s aotNan1.NW_018505377v1 377922 28 - 4471408 ----ACACTCT-AAATCAGCCTCATCTGCA-TCC i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111102920 28 - 145441459 ----ACAATCT-AAACCACCCTTGTCTGCC-TCC i mm10.chr7 C 0 C 0 s canFam3.chr1 4623568 29 - 122678785 ----ACACTCTGAAACCAATCTCATCTGCA-TCC i canFam3.chr1 C 0 I 5849 s dasNov3.JH563638 350728 32 + 643850 AGCCTCTCTCC-AAACCAACCTCATCTACA-CCC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e cebCap1.NW_016107633v1 1629761 1067 - 2680843 I a score=76134.000000 s hg38.chr19_GL383574v1_alt 85635 8 + 155864 CAGGCCCT------------ s panTro5.chr19 36154182 8 + 61309027 CAGGCCCT------------ i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900418 8 + 64411610 CAGGCCCT------------ i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317955 8 - 8369475 CAGGCCCT------------ i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911163 8 - 106955855 CAGGCCCT------------ i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223974 8 + 53671032 CAGGCCCT------------ i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675899 8 + 59248254 CAGGCCCT------------ i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4542660 8 - 13342542 CAGGCCCT------------ i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5472890 8 + 7714307 CAGGCCCT------------ i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29278584 8 + 50890351 CAGGCCCT------------ i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 904194 8 - 2385121 CAGGCCCT------------ i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2344368 8 + 4274983 CAGGCCCT------------ i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577285 8 + 49145316 TAGGCCCT------------ i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5420833 8 + 8899380 CAGGCCCT------------ i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 377950 8 - 4471408 CAGGTCCT------------ i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111102948 6 - 145441459 --GGCCTT------------ i mm10.chr7 C 0 I 10741 s dasNov3.JH563638 350760 19 + 643850 -AGCCTCTCCTGGTGGCCTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e canFam3.chr1 4623597 5849 - 122678785 I e cebCap1.NW_016107633v1 1629761 1067 - 2680843 I a score=165456.000000 s hg38.chr19_GL383574v1_alt 85643 17 + 155864 -ATTAAAAGGAGGTAGGg s panTro5.chr19 36154190 17 + 61309027 -ATTAAAAGGAGGTAGGg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900426 17 + 64411610 -ATTAAAAGGAGGTAGGg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317963 17 - 8369475 -ATTAAAAGGAGGTAGGg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911171 17 - 106955855 -ATTAAAAGGAGGAAGGg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223982 17 + 53671032 -ATTAAAAGGAGGAAGGg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675907 17 + 59248254 -ATTAAAAGGAGGAAGGg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4542668 17 - 13342542 -ATTAAAAGGAGGAAGGg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5472898 17 + 7714307 -ATTAAAAGGAGGAAGGg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29278592 17 + 50890351 -ATTAAAAGGAGGAAGGg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 904202 17 - 2385121 -ATTAAAAGGAGGAAGGg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2344376 17 + 4274983 -ATTAAAAGGAGGAAGGg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577293 17 + 49145316 -ATTAAAATGAGGAAGGg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5420841 17 + 8899380 -ATTAAAAGGAGGAACGg i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 377958 17 - 4471408 -ATTAAAAGGAGGAAGGg i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 350779 18 + 643850 GTTTAAAAGGACGCAGAG i dasNov3.JH563638 C 0 I 11812 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4623597 5849 - 122678785 I e cebCap1.NW_016107633v1 1629761 1067 - 2680843 I a score=1204683.000000 s hg38.chr19_GL383574v1_alt 85660 139 + 155864 gctgggtgcagtggcccatgcctgtaatcccaacacttcaggaggctgaggtggtaggattggattgcttgaggccaggagttggagaccagcctgggcaacatagcaagacctcatctgtacaaaaaatt-taaaaatt s panTro5.chr19 36154207 139 + 61309027 gctgggtgcagtggcccatgcctgtaatcccaacacttcaggaggctgaggtggtaggattggattgcttgaggccaggagttggagaccagcctgggcaacatagcaagacctcatctgtacaaaaaatt-taaaaatt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900443 138 + 64411610 gctgggtgcagtggcccatgcctgtaatcccaacacttcaggaggctgaggtggtaggattggattgcttgaggccaggagttggagaccagcctgggcaacatagcaagacctcatctgtacaaaaaatt-t-aaaatt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6317980 137 - 8369475 gctgggtgcagtggcccatgcttgtaatcccaacacttcaggaggctgaggtggtaggattggattgcttgaggccaggagttggagaccagcctgggcaacatagcaaga-ctcatctgtac-aaaaatt-taaaaatt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911188 139 - 106955855 gttgggtgcagtggcccatgcctgtaatcccaacacttcaggaggctgaggtggtaggattggattgcttgaggccaggagttggagaccagcctgggcaacatagcgagacctcatctctacaaaaaatt-taaaaatt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30223999 139 + 53671032 gctgggtgcggtggcccatgcctgtaatcccgatacttcaggaggctgaggtggtaggattggattgcttgaggccaggagttagagaccagcctgggcaacatagcgagacctcatctctacaaaaaatt-taaaaatt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34675924 139 + 59248254 gctgggtgcggtggcccatgcctgtaatcccgatacttcaggaggctgaggtggtaggattggattgcttgaggccaggagttagagaccagcctgggcaacatagcgagacctcatctctacaaaaaatt-taaaaatt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4542685 139 - 13342542 gctgggtgcggtggcccatgcctgtaatcccgatacttcaggaggctgaggtggtaggattggattgcttgaggccaggagttagagaccagcctgggcaacatagcgagacctcatctctacaaaaaatt-taaaaatt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5472915 139 + 7714307 gctggatgcggtggcccatgcctgtaatcccgatacttcaggaggctgaggtggtaggattggattgcttgaggccaggagttagagaccagcctgggcaacatagcgagatctcatctctacaaaaaatt-taaaaatt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29278609 139 + 50890351 gctgggtgcggtggcccatgcctgtaatcccgatacttcaggaggctgaggtggtaggattggattgcttgaggccaggagttagagaccagcctgggcaacatagcgagacctcatctctacaaaaaatt-taaaaatt i chlSab2.chr6 C 0 I 2719 s manLeu1.NW_012102454v1 904219 139 - 2385121 gctgggtgcggtggcccatgcctgtaatcccgatacttcaggaggctgaggtggtaggattggattgcttgaggccaggagttagagaccagcctgggcaacatagcgagacctcatctctacaaaaaatt-taaaaatt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2344393 139 + 4274983 gctgggcgcggtggcccatgcctgtaatcccgacacttcaggaggctgaggtggcaggattggattgcttgaggccaggagttagagaccagcctgggcaacatagcgagacctcatctctacaaaaaatt-taaaaatt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577310 130 + 49145316 gctgggtgcagtggctcatggctgtaatcccaacacttcaggaggctgaggtggtaggattggattgcttgaggccaggatt---------gcttgggcaacatagcaaggcctcatctctacaaaaaatt-aaaaaatt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5420858 131 + 8899380 gctgggtgcagtggctcatgcctgtaatcccaacacttcgggaagctgaggtggtaggattggattacttgaggccaggatt---------gcttgggcaacatatcgagacctcatctctaccaaaaattaaaaaaatt i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 377975 130 - 4471408 gctgggtgcagtggctcatgcctgtaatcccaacactttgggaggctgaggtagtaggattggattgcttgaggccaggatt---------gtttgggcaacatagcaagacctaatctctacaaaaaatt-aaaaaatt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350797 11812 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4623597 5849 - 122678785 I e cebCap1.NW_016107633v1 1629761 1067 - 2680843 I a score=1383414.000000 s hg38.chr19_GL383574v1_alt 85799 187 + 155864 aactgggcttgctggcacatacctgtagtcccagcttcttgggaggttgaggtgggaggatcacttcaaccccagagactgaggctgcagtgagcTAGCTATGATTgccgaggcaggtaaatcacttgagcccacgagttcgagatcagccggggcaacatagtgagacccagtctctaaccaaaaa s panTro5.chr19 36154346 187 + 61309027 aactgggcttgctggcacatacctgtagtcccagcttcttgggaggttgaggtgggaggatcacttcaaccccagagactgaggctgcagtgagcTAGCTATGATTgccgaggcaggtaaatcacttgagcccacgagttcgagatcagccggggcaacatagtgagaccccgtctctaaccaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900581 187 + 64411610 aactgggcttgctggcacatacctgtagtcccagcttcttgggaggttcaggtgggaggatcacttcaaccccagagactgaggctgcagtgagctagctatgattgccgaggcaggtaaatcacttgagcccacgagttcgagatcagccggggcaacatagtgagaccccgtctctaaccaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6318117 186 - 8369475 aactgggcttgctggcacatacctgtagtcccagcttcttgggaggttgaggtgggaggatcacttcaaccccagagactgaggctgcagtgagctagctatgattgccgaggcaggtaaatcacttgagcccaggagttcgagatcagcc-gggcaacatagtgagaccccgtctctaaccaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911327 187 - 106955855 aactgggcttggtggcgcatacctgtagtcccagcttcttgggaggttgaggtcagaggatcacttgaaccccagaggctgaggctgcagtgagcTAGCTATGATTgccggggcaggtaaatcgcttgagcccaggagtttgagatcagtcggggcaacacagtgagaccccgtctctaaccaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30224138 187 + 53671032 aactggacatggtggcgcataactgtagtcccagcttcttggaaggttgaggtgggaggatcacttgaaccccagagattgaggctgcagtgagctGGCTATGATTgccgagacaggtaaatcgcttgggcccaggagctcgagatcagcctgggcaacatagtgagaccccatctgtaaccaagaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34676063 187 + 59248254 aactggacatggtggcgcataactgtagtcccagcttcttggaaggttgaggtgggaggatcacttgaaccccagagattgaggctgcagtgagctGGCTATGATTgccgagacaggtaaatcgcttgggcccaggagctcgagatcagcctgggcaacatagtgagaccccatctgtaaccaagaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4542824 187 - 13342542 aactggacatggtggcgcataactgtagtcccagcttcttggaaggttgaggtgggaggatcacttgaaccccagagattgaggctgcagtgagctGGCTATGATTgccgagacaggtaaatcgcttgggcccaggagctcgagatcagcctgggcaacatagtgagaccccatctgtaaccaagaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5473054 187 + 7714307 aactggacatggtggcgcataactgtagtctcagcttcttggaaggttgaggtgggaggatcacttgaaccccagagattgaggctgcagtgagctGGCTATGATTgccgagacaggtaaatcgcttgggcccaggagctcaagatcagcctgggcaacatagtgagaccccatctgtaaccaagaa i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 904358 187 - 2385121 aactggacatggtggcgcataactgtagtcccagcttcttggaaggttgaggtgggaggatcacttgaaccccagagattgaggctgcagtgagctGGCTATGATTgccgagacaggtaaatcacttcggcccaggagctcgagatcagcctgggcaacatagtgagaccccatctgtaaccaagaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2344532 187 + 4274983 aactgggcatggtgatgcataactgtagtcccagcttcttggaaggttgaggtgggaggatcacttgaaccccagagatcgaggctgcagtgagctGGCTATGATTgccgagacaggtaaatcgcttggtcccaggagctcgagatcagcctgggcaacatagtgagaccccgtctgtaaccaaaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577440 183 + 49145316 aaccgggcatggtggcacatacctgttgtctcggcttcttaggaggttgaggtgggaggatcacttgaaccccagagattgaggctgcagtga----gctatgactgcagaggcaggtaaatcgcttgagcctgggagttcgagatcagcctgggcaacatagtgagaccccatctctaaccaaaaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5420989 183 + 8899380 aactgggcatggtggcacatacctgttgtctgagcttcttaggaggctgaggtaggaggatcacttgaaccccagagattgaggctgcagtga----gctatgattgctgaggcaggtaaatcgcttgagcccaggagctcgagatcagcctggacaacatagtgagactccatctctaaccaaaaa i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 378105 183 - 4471408 aactgggcatggtggcacatacctgttgtctcggcttcttaggaggttgaggtgggaggatcacttgatctccagagattgaggctgcagtga----gctatgattgctgaggctggtaaatcacttgagcccgggagttcgagatcagcctgggcgacatagtgagaccccatctctaaccaaaaa i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350797 11812 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e canFam3.chr1 4623597 5849 - 122678785 I e cebCap1.NW_016107633v1 1629761 1067 - 2680843 I a score=14205.000000 s hg38.chr19_GL383574v1_alt 85986 2 + 155864 ag s panTro5.chr19 36154533 2 + 61309027 ac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900768 2 + 64411610 ac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6318303 2 - 8369475 ag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911514 2 - 106955855 ag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30224325 2 + 53671032 ag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34676250 2 + 59248254 ag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4543011 2 - 13342542 ag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5473241 2 + 7714307 ag i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 904545 2 - 2385121 ag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2344719 2 + 4274983 ag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577623 2 + 49145316 ag i calJac3.chr22 C 0 I 308 s saiBol1.JH378197 5421172 2 + 8899380 ag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1630828 2 - 2680843 ag i cebCap1.NW_016107633v1 I 1067 C 0 s aotNan1.NW_018505377v1 378288 2 - 4471408 ag i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350797 11812 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e canFam3.chr1 4623597 5849 - 122678785 I a score=28726.000000 s hg38.chr19_GL383574v1_alt 85988 4 + 155864 agaa s panTro5.chr19 36154535 4 + 61309027 agaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900770 4 + 64411610 agaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6318305 4 - 8369475 agaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911516 4 - 106955855 ataa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30224327 4 + 53671032 aaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34676252 4 + 59248254 aaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4543013 4 - 13342542 aaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5473243 4 + 7714307 aaaa i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 904547 4 - 2385121 aaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2344721 4 + 4274983 aaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577933 4 + 49145316 aaga i calJac3.chr22 I 308 C 0 s saiBol1.JH378197 5421174 4 + 8899380 aaaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1630830 4 - 2680843 aaaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 378290 4 - 4471408 aaaa i aotNan1.NW_018505377v1 C 0 I 313 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350797 11812 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e canFam3.chr1 4623597 5849 - 122678785 I a score=45361.000000 s hg38.chr19_GL383574v1_alt 85992 5 + 155864 aGGAG s panTro5.chr19 36154539 5 + 61309027 aGGAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900774 5 + 64411610 aGGAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6318309 5 - 8369475 aGGAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911520 5 - 106955855 aGGAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30224331 5 + 53671032 aGGAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34676256 5 + 59248254 aGGAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4543017 5 - 13342542 aGGAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5473247 5 + 7714307 aGGAG i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 904551 5 - 2385121 aGGAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2344725 5 + 4274983 aGGAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577937 5 + 49145316 aaaaG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5421178 5 + 8899380 aaGAG i saiBol1.JH378197 C 0 I 372 s cebCap1.NW_016107633v1 1630834 5 - 2680843 aGGAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 378607 5 - 4471408 aGGAG i aotNan1.NW_018505377v1 I 313 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350797 11812 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e canFam3.chr1 4623597 5849 - 122678785 I a score=2545822.000000 s hg38.chr19_GL383574v1_alt 85997 286 + 155864 ATTATTCTGGGGATCCTATACCTCCCACTCCTGTTTAACTGTCAGGATTCCTGAAGTGAAGGGAGACTTCACTTCTCAAGCCACTTGACctattccactgaaacagttcttggtaagatcaccaacaatctccaGTGAGCAtttttgttttgagacagggtctcactctgtcactcaggctggaatgcagtggtgcgaacacagctcgtttcagcctcctgggcccaggcgatcctcccatctcagcctccagagtagctgggactacaggtgtgccaccacaact s panTro5.chr19 36154544 286 + 61309027 ATTATTCTGGGGATCCTATACCTCCCACTCCTGTTTAACTGTCAGGATTCCTGAAGTGAAGGGAGACTTCACTTCTCAAGCCACTTGACctattccactgaaacagttcttggtaagatcaccaacaatctccaGTGAGCAtttttgttttgagacagggtctcactctgtcactcaggctggaatgcagtggtgcgaacacagctcacttcagcctcctgggctcaggcgatcctcccatctcagcctccagagtagctgggactacaggtgtgccaccacaact i panTro5.chr19 C 0 C 0 s panPan2.chr19 39900779 286 + 64411610 ATTATTCTGGGGATCCTATACCTCCCACTCCTGTTTAACTGTCAGGATTCCTGAAGTGAAGGGAGACTTCACTTCTCAAGCCACTTGACctattccactgaaacagttcttggtaagatcaccaacaatctccaGTGAGCAtttttgttttgagacagggtctcactctgtcactcaggctggaatgcagtggtgcgaacacagctcacttcagcctcctgggctcaggcgatcctcccatctcagcctccagagtagctgggactacaggtgtgccaccacaact i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6318314 286 - 8369475 ATTATTCTGGGGATCCTATACCTCCCACTCCTGTTTAACTGTCAGGATTCCTGAAGTGAAGGGAGACTTCACTTCTCAAGCCACTTGACctattccactgaaacagttcttggtaagatcaccaacaatctccaGTGAGCAtttttgttttgagacagggtctcactctgtcactcaggctggaatgcagtggtgcgaacacagctcactccagcctcctgggctcaggcgatcctcccatctcagcctccagagtagctgggactacaggtgtgccaccacaact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911525 285 - 106955855 ATTATCCTGGGGATCCTATACCTCCCACTCCTGTTTAACTGTCAGGATTCCTGAAGTGAAGGGAGACTTCACTTCTCAAGCCACTTGGCctattctactaaaacagttcttggtaagatcaccaataatctccaGTGAGCA-ttttgttttgagacagggtctcactctgtcactcaggctggaatgcagtggtgtgaacacagctcacttcagcctcctgggctcaggcgatcctctcacctcagcctccagagtagctgggactacaggtgtgccaccatgacc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30224336 285 + 53671032 ATTATCCTGGGGATCCTACACCTCCCACTCCTGTTTAACTGTCAGGATTCCTGAAGTGAAGGCAGACTTCACTTCTCGAGCCACTTGACctattccactgaaacagttcttagtaagatcaccaacaatctccaGTGAGCC-ttttgttttgagacagggtctcactctgtcactcatgctgtaatgcagtggtgtgaacatagctcacttcagcctcctgggctcaggcgatcctcccacctcagcctccagagcagctgggaccacaggtgtgccaccacgact i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34676261 285 + 59248254 ATTATCCTGGGGATCCTACACCTCCCACTCCTGTTTAACTGTCAGGATTCCTGAAGTGAAGGCAGACTTCACTTCTCAAGCCACTTGACctattccactgaaacagttcttagtaagatcaccaacaatctccaGTGAGCC-ttttgttttgagacagggtctcactctgtcactcatgctgtaatgcagtggtgtgaacatagctcacttcagcctcctggactcaggcgatcctcccacctcagcctccagagcagctgggaccacaggtgtgccaccacgact i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4543022 285 - 13342542 ATTATCCTGGGGATCCTACACCTCCCACTCCTGTTTAACTGTCAGGATTCCTGAAGTGAAGGCAGACTTCACTTCTCAAGCCACTTGACctattccactgaaacagttcttagtaagatcaccaacaatctccaGTGAGCC-ttttgttttgagacagggtctcactctgtcactcatgctgtaatgcagtggtgtgaacatagctcacttcagcctcctgggctcaggcgatcctcccacctcagcctccagagcagctgggaccacaggtgtgccaccacgact i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5473252 285 + 7714307 ATTATCCTGGGGATCCTACACCTCCCACTCCTGTTTAACTGTCAGGATTCCTGAAGTGAAGGGAGACTTCACTTCTCAAGCCACTTGACctattccactaaaacagttcttagtaagatcaccaacaatctccaGTGAGCC-ttttgttttgagacagggtctcactctgtcactcatgctgtaatgcagtggtgtgaacatagctcacttcagcctcctgggctcaggcgatcctcccacctcagcctccagagtagctgggaccacaggtgtgccactacgact i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 904556 285 - 2385121 ATTATCCTGGGGATCCTACACCTCCCACTCCTGTTTAACTGTCAGGATTCCTGAAGTGAAGGGAGACTTCACTTCTCAAGCCACTTGACctattccactaaaacagttcttagtaagatcaccaacaatctccaGTGAGCC-ttttgttttgagacagggtctcactctgtcactcatgctgtaatgcggtggtgtgaacatagctcacttcagcctcctgggctcaggcgatcctcccacctcagcctccagagtagctgggaccacaggtgtgccaccacgACT i manLeu1.NW_012102454v1 C 0 I 5434 s colAng1.NW_012111697v1 2344730 285 + 4274983 ATTATCCTGGGGATCCTACACCTCCCACTCCTGTTGAACTGTCAGGATTCCTGAAGTGAAGGGAGACTTCACTTCTCAAGTCACTTGACCTATTCCACTAAAACAGTTCTTGCTAACATCACCAACAATCTCCAGTGAGCC-ttttgttttgagacagggtctcactctgtcactcatgctgtaatgcagtggtgtgaacatagctcacttcagcctcctgggctcaggcgatcctcccacctcagcctccagagtagctgggaccacaggtgtgccaccacgact i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28577942 282 + 49145316 ATTATCCT-GGGATCCTACACCTCCCACTCCTGTTTAACTGTCAGGACTCCTGAAATGAAAGGAGACTTCACTTCTCAAGCCACTTGACctattccattagaacagttcttggtaagatcaccaacaatctccaGTGAGCC-ttttgttttgagacagggtctcactc--tcactcaggctgaaatgcagtggtgcgaacacaactcacttcaacctcctggactcaagcaatcctcccaccccagcctccagagtagctgggactacaggtgtgccaccacgcct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5421555 282 + 8899380 ATTATCCT-GGGACCCTACACCTCCCACTCCTGTTTAACTGTCAGGACTCCTGAAATGAAAGGAGACTTCACTTCTCAAGCCACTTGACctattccactaaaacagttcttgataagatcaccaacaatctccaGTGAGCC-ttttgttttgagacagggtctcactc--tcactcaggctgaaatgcagtggtgcgaacacagctcatttcaacctcctggactcaggcaatcctcccaccccagcctccagagtagctgggactacaggtgtgccaccatgcct i saiBol1.JH378197 I 372 C 0 s cebCap1.NW_016107633v1 1630839 278 - 2680843 ATTATCCT-GGGATCCTACACTTCCCACTCCTGTTTAACTGTCAGGACCCCTGAAATGAAAGGAGACTTCACTTCTCAAGCCACTTGACctattccactaaaacagttcttggtaagatcaccaacaatctccaGTGAGCt-ttttgttttgagacagggtctcact------ctcaggctgaaatgcagtggtgcgaacacagctcacttcaacctcctggactcgggcaatcctcccaccccagcctccagcgtagctgggactacaggtgtgccaccacacca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 378612 282 - 4471408 ATTATCCT-GGGATCCTACACCTCCCACTCCTGTTTAATATTCAGGACTCCTGAAATGAAAGGAGACTTCACTTCTCAAGCCACTTGACctattccactaaaacagttctcgctaagatcaccaacaatctccaGTGAGCC-ttttgttttgagacagggtctcactc--tcattcaggctgaaatgcagtggtgtgaacacagctcacttcaacctcctggactcaggcaatcctcccaccccagcctccagagtagctgggactacaggtgtgccatcacacct i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350797 11812 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e canFam3.chr1 4623597 5849 - 122678785 I a score=852821.000000 s hg38.chr19_GL383574v1_alt 86283 114 + 155864 ggctaattttttaattttttgtagagacatagttttgccatgttgcccaggctagtctcgaattcctgggctcaagtgatctgcctgcctcaacctcccaaagtgctgaaatta s panTro5.chr19 36154830 114 + 61309027 ggctaattttttaattttttgtagagacatagttttgccatgttgcccaggctagtctcgaactcctgagctcaagtgatctgcctgcctcaacctcccaaagtgctgaaatta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901065 114 + 64411610 ggctaattttttaattttttgtagagacatagttttgccatgttgcccaggctagtctcgaactcctgagctcaagtgatctgcctgcctcaacctcccaaagtgctgaaatta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6318600 114 - 8369475 ggctaattttttaattttttatagagacatagttttgccatgttgcccaggctagtctcgaactcctgggctcaagtgatctgcctgcctcaacctcccaaagtgctgaaatta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911810 114 - 106955855 ggctaatttttaaattttttgtagagacatggttttgccatgttgcccaggctagtctcgaactcctgggctcaagtgatctgcctgcctcagcctcccaaagtgctgaaatta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30224621 112 + 53671032 ggctaattttttaattttttgtagagacatagttttgccatgttgcccgggctagtctcgaactcctggactcaagcgatctgcctgccacagcctccc--agtgctgaaatta i rheMac8.chr19 C 0 I 15 s macFas5.chr19 34676546 112 + 59248254 ggctaattttttaattttttgtagagacatagttttgccatgttgcccgggctagtctcgaactcctgggctcaagcgatctgcctgccgcagcctccc--agtgctgaaatta i macFas5.chr19 C 0 I 15 s macNem1.NW_012011689v1 4543307 112 - 13342542 ggctaattttttaattttttgtagagacatagttttgccatgttgcccgggctagtctcgaactcctgggctcaagcgatctgcctgccgcagcctccc--agtgctgaaatta i macNem1.NW_012011689v1 C 0 I 15 s cerAty1.NW_012005268v1 5473537 114 + 7714307 cgctaattttttaattttttgtagagacatagttttgtcatgttgcccaggctggtctcgaactcccgggctcaagcgatctgcctgccgcagcctcccaaaatgctgaaatta i cerAty1.NW_012005268v1 C 0 I 15 s colAng1.NW_012111697v1 2345015 114 + 4274983 ggctaattttttaattttttgtagaggcatagttttgccatgttgcccaggctagtctcgaactcctgggctcaagcgatctacctgccgcagcctcccaaagtgctgaaatta i colAng1.NW_012111697v1 C 0 I 15 s calJac3.chr22 28578224 114 + 49145316 ggcaaagttttaaattttttgtagagacatggttttgccatgttgcccaggctagtcttgaactcctgggctcaagcgatctgcctgcttccgcctcccaaagtgctgaaatta i calJac3.chr22 C 0 I 15 s saiBol1.JH378197 5421837 114 + 8899380 ggcaaagttttaaattttctgtagagacatggttttgccatgttgcccaggctagtcttgaactcccgggctcaagtgatctgcctgcttctgcctcccatagtgctgaaatta i saiBol1.JH378197 C 0 I 15 s cebCap1.NW_016107633v1 1631117 114 - 2680843 ggcaaagttttaaatgttctgtagagacatggttttgccatgttgcccaggctagtcttgaactcctgggctcaagcgatctgcctgcttctgcctcccaaagtgctgaaatta i cebCap1.NW_016107633v1 C 0 I 15 s aotNan1.NW_018505377v1 378894 114 - 4471408 ggcaaagttttaaattttttgtagagacatggttttgccatgttgcccacgctagtcttgaactcctgggctcaagcaatctgcctgcttccacctcccaaagtgctgaaatta i aotNan1.NW_018505377v1 C 0 I 368 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350797 11812 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e canFam3.chr1 4623597 5849 - 122678785 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I a score=60211.000000 s hg38.chr19_GL383574v1_alt 86397 9 + 155864 GCACCCAGC s panTro5.chr19 36154944 9 + 61309027 GCACCCAGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901179 9 + 64411610 GCACCCAGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6318714 9 - 8369475 GCACCCAGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911924 9 - 106955855 GCACCCAGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30224748 9 + 53671032 gtgcccagc i rheMac8.chr19 I 15 C 0 s macFas5.chr19 34676673 9 + 59248254 gtgcccagc i macFas5.chr19 I 15 C 0 s macNem1.NW_012011689v1 4543434 9 - 13342542 gtgcccagc i macNem1.NW_012011689v1 I 15 C 0 s cerAty1.NW_012005268v1 5473666 9 + 7714307 gcgcccagc i cerAty1.NW_012005268v1 I 15 C 0 s colAng1.NW_012111697v1 2345144 9 + 4274983 gcgcccagc i colAng1.NW_012111697v1 I 15 C 0 s calJac3.chr22 28578353 9 + 49145316 gcgcccagc i calJac3.chr22 I 15 C 0 s saiBol1.JH378197 5421966 9 + 8899380 gcgcccagc i saiBol1.JH378197 I 15 C 0 s cebCap1.NW_016107633v1 1631246 9 - 2680843 gcgcccagc i cebCap1.NW_016107633v1 I 15 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 350797 11812 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e canFam3.chr1 4623597 5849 - 122678785 I e aotNan1.NW_018505377v1 379008 368 - 4471408 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I a score=87269.000000 s hg38.chr19_GL383574v1_alt 86406 13 + 155864 TGTATGTATTATC s panTro5.chr19 36154953 13 + 61309027 TGTATGTATTATC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901188 13 + 64411610 TGTATGTATTATC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6318723 13 - 8369475 TGTATGTATTATC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911933 13 - 106955855 TGTATGTATTATC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30224757 13 + 53671032 TCTGTGTATTATC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34676682 13 + 59248254 TCTGTGTATTATC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4543443 13 - 13342542 TCTGTGTATTATC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5473675 13 + 7714307 TCTGTGTATTATC i cerAty1.NW_012005268v1 C 0 C 0 s colAng1.NW_012111697v1 2345153 13 + 4274983 TGTGTGTATTATC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28578362 13 + 49145316 TGTAGGTATTATC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5421975 13 + 8899380 TGTAGGTATTATC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1631255 13 - 2680843 TGTAGGTATTATC i cebCap1.NW_016107633v1 C 0 C 0 s dasNov3.JH563638 362609 13 + 643850 TGTATGTATTATT i dasNov3.JH563638 I 11812 I 2 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e canFam3.chr1 4623597 5849 - 122678785 I e aotNan1.NW_018505377v1 379008 368 - 4471408 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I a score=126674.000000 s hg38.chr19_GL383574v1_alt 86419 17 + 155864 TTGGTTTTGTTTTTGTT s panTro5.chr19 36154966 17 + 61309027 TTGGTTTTGTTTTTGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901201 17 + 64411610 TTGGTTTTGTTTTTGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6318736 17 - 8369475 TTGGTTTTGTTTTTGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911946 17 - 106955855 TTGGTTTTGTTTTTGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30224770 17 + 53671032 TTGGTTTTGTTTTTGTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34676695 17 + 59248254 TTGGTTTTGTTTTTGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4543456 17 - 13342542 TTGGTTTTGTTTTTGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5473688 17 + 7714307 TTGGTTTTGTTTTTGTT i cerAty1.NW_012005268v1 C 0 C 0 s colAng1.NW_012111697v1 2345166 17 + 4274983 TTGGTTTTGTTTTTGGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28578375 17 + 49145316 TTGGTTTTCTTTTTGTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5421988 17 + 8899380 TTGGTTTTCTTTTTGTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1631268 17 - 2680843 TTGGTTTTCTTTTTGTT i cebCap1.NW_016107633v1 C 0 C 0 s canFam3.chr1 4629446 17 - 122678785 TTGGTTTTGCAAATGTT i canFam3.chr1 I 5849 C 0 s dasNov3.JH563638 362624 14 + 643850 CTTGTTTTGTATTT--- i dasNov3.JH563638 I 2 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e aotNan1.NW_018505377v1 379008 368 - 4471408 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I a score=596594.000000 s hg38.chr19_GL383574v1_alt 86436 81 + 155864 TGTTTACAA-TTTTTT----CCCCTGGAGTTTCTGATTGGCTCTT-----------------------------------------------GGATGTTCTCTGTTACTTGGAATCTATTCCACTCTCCTTGT s panTro5.chr19 36154983 81 + 61309027 TGTTTACAA-TTTTTT----CCACTGGAGTTTCTGATTGGCTCTC-----------------------------------------------GGATGTTCTCTGTTACTTGGAATCTATTCCACTCTCCTTGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901218 81 + 64411610 TGTTTACAA-TTTTTT----CCCCTGGAGTTTCTGATTGGCTCTC-----------------------------------------------GGATGTTCTCTGTTACTTGGAATCTATTCCACTCTCCTTGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6318753 70 - 8369475 TGTTTACAA-TTTTTT----CCCCTGGAGTTTCTGATTGGCTCTT-----------------------------------------------GGATGTTCTC-----------ATCTATTCCACTCTCCTTGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63911963 81 - 106955855 TGTTTACAA-TTTTTT----CCCCTGGAGTTTCTGATTGGCTCTC-----------------------------------------------GGATGTTCTCTGTTACTTGGAATCTATTCCACTCTCCTTGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30224787 81 + 53671032 T-TTTACAG-TTTTTTT---CCCCAGGAGTTTCTGATTGGCTCTC-----------------------------------------------GGATGTTCTCTGTTACTGGGAATTTATTCCACTCTCCttgt i rheMac8.chr19 C 0 I 285 s macFas5.chr19 34676712 81 + 59248254 T-TTTACAG-TTTTTTT---CCCCAGGAGTTTCTGATTGGCTCTC-----------------------------------------------GGATGTTCTCTGTTACTGGGAATTTATTCCACTCTCCttgt i macFas5.chr19 C 0 I 285 s macNem1.NW_012011689v1 4543473 81 - 13342542 T-TTTACAG-TTTTTTT---CCCCAGGAGTTTCTGATTGGCTCTC-----------------------------------------------GGATGTTCTCTGTTACTGGGAATTTATTCCACTCTCCttgt i macNem1.NW_012011689v1 C 0 M 1269 s cerAty1.NW_012005268v1 5473705 82 + 7714307 T-TTTACAG-TTTTTTTC--CCCCAGGAGTTTCTGATTGGCTCTC-----------------------------------------------GGATGTTCTCTGTTACTGGAAATTTATTCCACTCTCCttgt i cerAty1.NW_012005268v1 C 0 I 285 s colAng1.NW_012111697v1 2345183 81 + 4274983 T-TTTACAG-TTTTTTT---CCCCAGGAGTTTCTGATTGGCTCTC-----------------------------------------------GGATGTTCTCTGTTACTGGGAATTTATTCCACTCTCCTTGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28578392 81 + 49145316 TGTTTACAA-TTTTTT----CCCCTAGACGTTCTGATTGGCTCTT-----------------------------------------------GGATGTTCTCTGTTACTTGGAATCTATTCCATTCTCCTGGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422005 80 + 8899380 TGTTTGCAATTTTTTT----CCCCTAAAGTTTCTGATTGGCTCTT-----------------------------------------------TGATGTTCTC--TTACTTGGAATCTATTCCATTCTCCTTGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1631285 80 - 2680843 TGTTTACAA-CTTTTT----CCCCTAGAGTTTTTGATTGGCTCTT-----------------------------------------------GGATGTTCTCTGTTACTTGGAATCTATTCCATTCTCCT-GT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 379376 80 - 4471408 TGTTTACAA-TTTTTT----CCCCTAGAGTTTCTGATTGGCTCTT-----------------------------------------------GGATATTCTCTGTTA-TTGGAATCTATTCCATTCTCCTTGT i aotNan1.NW_018505377v1 I 368 C 0 s canFam3.chr1 4629463 77 - 122678785 ------CAT-TCTCTCTCGTCTCATTTTCTCTCTGACTGCCTCTC-------------------------------------------------ATATTCTCCGTTACTTGGAATCTATTTCATTCTTCTTGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 362638 128 + 643850 TGTTTACGA-TTTTTT----CCTCTGGAAATTCTGATTGGTTTTCTTCCTCCCTCTGCTCTGCAGTCCATCCCCAGCCCTGACAATTTTTTTGGACGTTCTCTTCTACTTGCAATCTGTTCTGTTCTTCTTGA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I a score=118197.000000 s hg38.chr19_GL383574v1_alt 86517 29 + 155864 ACTCACCAACTTTCTAGTTTAATTCAGAC s panTro5.chr19 36155064 29 + 61309027 ACTCACCAACTTTCTAGTTTAATTCAGAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901299 29 + 64411610 ACTCACCAACTTTCTAGTTTAATTCAGAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6318823 29 - 8369475 ACTCACCAACTTTCTAGTTTAATTCAGAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912044 29 - 106955855 ACTCACCAACTTTCTAGTTTAATTCCGAC i nomLeu3.chr10 C 0 C 0 s colAng1.NW_012111697v1 2345264 29 + 4274983 ACTCATCAACTTTCTAGTTTAATTCAGAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28578473 25 + 49145316 ATGCACCAACTTTCTAG----TTTCAGAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422085 29 + 8899380 ACGCACCAACTTTCTAGTTTATTTCAGAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1631365 29 - 2680843 ATGCACCAACTTTCTAGCTTATTTCAGAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 379456 29 - 4471408 ATGCACCAACTTTCTAGTTTATTTCAGAC i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4629540 29 - 122678785 GCTTAACAATTTTCTAATAGAATTTAGAC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 362766 28 + 643850 GCTCTCTGA-TTTCTAATCTAATTTAAAC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I e cerAty1.NW_012005268v1 5473787 285 + 7714307 I e macNem1.NW_012011689v1 4543554 1269 - 13342542 M e macFas5.chr19 34676793 285 + 59248254 I e rheMac8.chr19 30224868 285 + 53671032 I a score=1550274.000000 s hg38.chr19_GL383574v1_alt 86546 210 + 155864 CATTTCTTCTTTGGACAGTTA-TTTTCTGTACAGCTTTTGGG-TTTTCCTGGAGTTTCTGAATGTTTGTTCTT-----GCTGGTATTTGTTGCCTTTAT---CATATTCTCAAGTTTTTCCAACTCCTCACCCATA------CTAT---AATTCAGTCTACAAAATCTCC-TTTTTTTCATACAGACTGTTCTTCCATAACCTTCCACCATTCTGCTAAGATCCAAACAg s panTro5.chr19 36155093 210 + 61309027 CATTTCTTCTTTGGACAGTTA-TTTTCTGTACAGCTTTTGGG-TTTTCCTGGAGTTTCCGAATGTTCGTTCTT-----GCTGGTATTTGTTGCCTTTAT---CATATTCTCAAGTTTTTCCAACTCCTCAACCATA------CTAT---AATTTAGTCTACAAAATCTCC-TTTTTTTCGTACAGACTGTTCTTCCATAACCTTCCACCATTCTGCTAAGATCCAAACAg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901328 210 + 64411610 CATTTCTTCTTTGGACAGTTA-TTTTCTGTACAGCTTTTGGG-TTTTCCTGGAGTTTCCGAATGTTCGTTCTT-----GCTGGTATTTGTTGTCTTTAT---CATATTCTCAAGTTTTTCCAACTCCTCAACCATA------CTAT---AATTTAGTCTACAAAATCTCC-TTTTTTTCGTACAGACTGTTCTTCCATAACCTTCCACCATTCTGCTAAGATCCAAACAg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6318852 210 - 8369475 CATTTCTTCTTTGGACTGTTA-TTTTCTGTACAGCTTTTGGG-TTTTCCTGGAGTTTCTGAATGTTCGTTCTT-----GCTGGTATTTGTTGCCTATAT---CATATTCTCAAGTTTTTCCAACTCCTCAACCATA------CTAT---AATTTAGTCTACAAAATCTCC-TTTTTTTCGTACAGACTGTTCTTCCATAACCTTCCACCATTCTGCTAAGATCCAAACAg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912073 210 - 106955855 CATTTCTTCTTTGGACTGTTC-TTTTCTGTACAGCTTTTGGG-TTTTCCTGGAGTTTCTGAATGTTCATTCTT-----GCCGGTATTTGTTGCCTTTAT---CATATTCTCAAGTTTTTCCAACTCCTCAACCATA------CTAT---GATTTAGTCTACAAAATCTCC-TTTTTTTCGTAGAGACTGTTCTTCCATAACCTTCCACCATTCTGCTAAGATCCAAACAg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30225153 210 + 53671032 CATTTCTTCTTTGGACTGTTT-TTTTCTGTACAGCTTTTCGG-TTTTCCTGGAGTTTCTAAATGTTCGTTCTT-----CCTGGTGTTTGTTGCCTTTAT---CCTATTCTCAAGTTTTTCCAACTCCTCAACCATG------CTAT---GATTTAGTCTACAAAATCTCC-TTTTTTTCATAGAGACTGTTCTTCCATAACCTCCCACCATTCTGCTAAGATCCAAACAg i rheMac8.chr19 I 285 C 0 s macFas5.chr19 34677078 210 + 59248254 CATTTCTTCTTTGGACTGTTT-TTTTCTGTACAGCTTTTCGG-TTTTCCTGGAGTTTCTAAATGTTCGTTCTT-----CCTGGTGTTTGTTGCCTTTAT---CCTATTCTCAAGTTTTTCCAACTCCTCAACCATG------CTAT---GATTTAGTCTACAAAATCTCC-TTTTTTTCATAGAGACTGTTCTTCCATAACCTCCCACCATTCTGCTAAGATCCAAACAg i macFas5.chr19 I 285 C 0 s cerAty1.NW_012005268v1 5474072 210 + 7714307 CATTTCTTCTTTGGACTGTTA-TTTTCTGTACAGCTTTTGGG-TTTTCCTGGAGTCTCTAAATGTTCGTTCTT-----CCTGGTGTTTGTTGCCTTTAT---CCTATTCTCAAGTTTTTCCAACTCCTCAACCATG------CTAT---GATTTAATCTACAAAATCTCC-TTTTTTTCATAGAGACTGTTCTTCCATAACCTCCCACCATTCTGCTAAGATCCAAACAg i cerAty1.NW_012005268v1 I 285 C 0 s colAng1.NW_012111697v1 2345293 210 + 4274983 CATTTCTTCTCTGGACTGTTA-TTTTCTGTACAGCTTGTGGG-TTTTCCTGGAGTTTCTAAATGTTCGTTCTT-----CCTGGTGTTTGTTGCCTTTAT---CATATTCTCAAGTTTTTCCAACTCCTCAACCATG------CTAT---GATTTAGTCTACAAAATCTCC-TTTTTTTCATAGAGACTGTTCTTCCATAACCTCCCACCATTCTGCTAAGATCCAAACAg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28578498 206 + 49145316 CATTTCTTCTTTGGACTGTTA-TTTTCTGTACAGCTTTTGTTTTTTTTCTGGAGTTTCTGAATGTTCTTTCTT-----ACTGATATTTGTTGCCTTTAT---TATATTATCAAGTTTTTCCAACTCCTCAACCATA------CTAT---GACTTAGTCTACACAATTT---TTTTTTTCATAGAGACCG---TTCCATAACCTCCCGCCATTCTCCTAAAATCCAAACAg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422114 212 + 8899380 CATTTCTTTTTTGGACTGTTA-TTTTCTGTACAGCTTTTGTTTTTTTTCTGGAGTTTCTGAATGTTCATTCTT-----ACTGATATTTGTTACCTTTAT---TATATTATCAGGTTTTTCCAACTCCTCAACCATA------CTAT---GACTTCGTCTACAAAATCTCCCTTTTCTTCGTAGAGACCGTTCTTCCATAACCTCCCACCATTCTCCTAAAATCCAAACGg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1631394 209 - 2680843 CATTTCTTCTTTGGAC---TA-TTTTCTGTACAGCTTTTGGGTTTTTTCTGGAGTTTCTGAATGCTCATTCTT-----ACTGATATTTGTTGCCTTTAT---TATATTATCAAGTTTTTCCAACTCCTCAACCATA------CTAT---GACTTAGTCTACAAAATCTCCTTTTTTTTCGTAGAGACTGTTCTTCCATAACCTCCCACCATTCTCCTAAAATCCAAGCAg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 379485 212 - 4471408 CGTTTCTTCTTTGGACTGTTA-TTTTCTGTACAGCTTTTGGGTTTTTTCTGGAGTTTCTGAATGTTCATTCTT-----ACTGATATTCATTGCCTTTAT---TATATTATCAAGTTTTTCCAACTCCTCAACCATA------CTAT---GACTTAGTCTACAAAATCTCCTTTTTTTTCGTAGAGACTGTTCTTCCATAACCTCCCACCACTCTCCTAAAATCCAAACAg i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4629569 194 - 122678785 AGTTTTTTCCTTGGACCATTA-CTTTCTCTACAGCTTTTTGT-TTTTCCTGGAGTTGCTGAATGTTCTTTGCT-------TGTTATTTGTTGCTTTTAT---CATATAATAAGGTTTTTCTAAACCCTCACCCGTA------TCATTTCGATTTGGTCTGTGAAGTCATC--TTTCTTCCTAGAGGCTGTT----------------CCATCCTACTAAAATCCAAACAG i canFam3.chr1 C 0 I 14 s dasNov3.JH563638 362794 223 + 643850 CATTTCTTGTTTGGaccattacttttttgtatagcttttgt--ttttcctggagtttctgaatgctctttttttgtttgtttgtatttgttgcctttatgaacctaccctaaaggttttccaagtcctcagctctagcatctcttt---gatttagtctatgaagtctcc-tttttttc-tggagactgttatcttatagatttccaccatcctgcctcagaccgaacat i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I e macNem1.NW_012011689v1 4543554 1269 - 13342542 M a score=398998.000000 s hg38.chr19_GL383574v1_alt 86756 68 + 155864 gccaggcatggtggatgataccaataatcccagtacattgggatgctgaggcaggcagatcgtttgag s panTro5.chr19 36155303 68 + 61309027 gccaggcgtggtggatgataccaataatcccagtacattgggacgctgaggcaggcagatcgtttgag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901538 68 + 64411610 gccaggcgtggtggatgataccaataatcccagtacattgggacgctgaggcaggcagatcgtttgag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319062 68 - 8369475 gccgggcgtggtggatgataccaataatcccagtacattgggacgctgaggcaggcagatcgcttgag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912283 68 - 106955855 gccgggcgtggtggatcataccaataatcccagtatattggggcgctgaggcaggcagatcacttgag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30225363 68 + 53671032 gccaggcgccgtggattataccaataatcctagcacattgggacgctgaggcaggcagatcgctcgag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34677288 68 + 59248254 gccaggcgccgtggattataccaataatcctagcacattgggacgctgaggcaggcagatcgctcgag i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5474282 68 + 7714307 gccaggcgccgtggattataccaataaacccagcacattgggacgctgaggcaggcagatcgctcgag i cerAty1.NW_012005268v1 C 0 C 0 s colAng1.NW_012111697v1 2345503 68 + 4274983 gccaggcaccgtggattataccaataatcccagcacattgggacgctgaggcaggcagatcgctcgag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28578704 68 + 49145316 gccgagtacagtggatcatgccaataatcccagcactttgggatgctgaggcaggcagatagcttgaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422326 68 + 8899380 accaagcacggtggatcatgccaataatcccagcactttgggatgctgaggcgggcagatagcttgag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1631603 68 - 2680843 gccgagcgcggtggatcatgccaataatcccagcactttgggacgctgaggcaggcagatagcttgag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 379697 68 - 4471408 gccgagcgcggtggatcatgccaataatcccagcactttgggatgctgaggcaggcagatagcttgag i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 363017 12 + 643850 -------------------gccact-------------------------------------tttgag i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e canFam3.chr1 4629763 14 - 122678785 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I e macNem1.NW_012011689v1 4543554 1269 - 13342542 M a score=239694.000000 s hg38.chr19_GL383574v1_alt 86824 39 + 155864 cccaggagttcgagaccagcctgggaaacatagtgagat s panTro5.chr19 36155371 39 + 61309027 cccaggagttcgagaccagcctgggaaacatagtgagat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901606 39 + 64411610 cccaggagttcgagaccagcctgggaaacatagtgagat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319130 39 - 8369475 cccaggagttcgagaccagcctgggaaacatagtgagat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912351 39 - 106955855 cccaggagtttgagaccagcctgggaaacatagtgagat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30225431 39 + 53671032 cccaggagttcaagaccagtctgggtgacatagtaagat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34677356 39 + 59248254 cccaggagttcaagaccagtctgggtgacatagtaagat i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5474350 39 + 7714307 cccaggagttcaagaccagtctgggtgacatagtaagat i cerAty1.NW_012005268v1 C 0 C 0 s colAng1.NW_012111697v1 2345571 39 + 4274983 cccaggagttcaagaccagcctgggtgacatagtaagat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28578772 39 + 49145316 ctgaggagtctgagaccagtctgggcaacacagtgagat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422394 39 + 8899380 ccgaggagtttgagaccagtctgggtaacacagtgagat i saiBol1.JH378197 C 0 I 259 s cebCap1.NW_016107633v1 1631671 39 - 2680843 ccgaggagtttgagaccagtctgggcaatacagtgagat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 379765 39 - 4471408 ccgaggagtttgagaccagtctgggtaacacagtgagat i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363029 0 + 643850 C e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e canFam3.chr1 4629763 14 - 122678785 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I e macNem1.NW_012011689v1 4543554 1269 - 13342542 M a score=100186.000000 s hg38.chr19_GL383574v1_alt 86863 28 + 155864 cttggtgtct------aataaaaaag-aaaaaaAA s panTro5.chr19 36155410 28 + 61309027 cttggtgtct------aataaaaaag-aaaaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901645 28 + 64411610 cttggtgtct------aataaaaaag-aaaaaaAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319169 28 - 8369475 cttggtgtct------aataaaaaag-aaaaaaAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912390 29 - 106955855 ccttgtgtct------aataaaaaagaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30225470 28 + 53671032 ccttgtctct------aattaaaaag-acaaaaaa i rheMac8.chr19 C 0 I 661 s macFas5.chr19 34677395 28 + 59248254 ccttgtctct------aataaaaaag-acaaaaAA i macFas5.chr19 C 0 I 7 s cerAty1.NW_012005268v1 5474389 28 + 7714307 ccttctctct------aatacaaaag-acaaaaaa i cerAty1.NW_012005268v1 C 0 I 330 s colAng1.NW_012111697v1 2345610 28 + 4274983 ccttgtctct------aagaaaaaag-accaaaaa i colAng1.NW_012111697v1 C 0 I 4 s calJac3.chr22 28578811 26 + 49145316 tttcatctct--------aaaaaaag-aaaaacaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422692 34 + 8899380 ctccgtctccaaaaaaaaaaaaaaag-aaaAACAA i saiBol1.JH378197 I 259 C 0 s cebCap1.NW_016107633v1 1631710 25 - 2680843 tctcatctct---------aaaaagg-aaaaaTAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 379804 25 - 4471408 tctcatctct---------aaaaaag-aaaaacaa i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363029 0 + 643850 C e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e canFam3.chr1 4629763 14 - 122678785 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I e macNem1.NW_012011689v1 4543554 1269 - 13342542 M a score=33221.000000 s hg38.chr19_GL383574v1_alt 86891 9 + 155864 ---TTGAAAAAG s panTro5.chr19 36155438 9 + 61309027 ---atgaaaaag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901673 9 + 64411610 ---TAGAAAAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319197 9 - 8369475 ---TTGAAAAAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912419 9 - 106955855 ---ttgaaaaag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34677430 9 + 59248254 ---TTGAAAAAG i macFas5.chr19 I 7 I 603 s colAng1.NW_012111697v1 2345642 9 + 4274983 ---TTGAAAAAG i colAng1.NW_012111697v1 I 4 C 0 s calJac3.chr22 28578837 12 + 49145316 TTTTTGaaaaat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422726 12 + 8899380 TTTTCAAAAAGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1631735 12 - 2680843 TTTTCAAAAAAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 379829 12 - 4471408 TTTTTGaaaaag i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363029 0 + 643850 C e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29278748 2719 + 50890351 I e canFam3.chr1 4629763 14 - 122678785 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I e cerAty1.NW_012005268v1 5474417 330 + 7714307 I e macNem1.NW_012011689v1 4543554 1269 - 13342542 M e rheMac8.chr19 30225498 661 + 53671032 I a score=52241.000000 s hg38.chr19_GL383574v1_alt 86900 7 + 155864 ATAAATA s panTro5.chr19 36155447 7 + 61309027 ataaata i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901682 7 + 64411610 ATAAATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319206 7 - 8369475 ATAAATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912428 7 - 106955855 ataaata i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34678042 7 + 59248254 ataaata i macFas5.chr19 I 603 C 0 s macNem1.NW_012011689v1 4544871 7 - 13342542 ataaata i macNem1.NW_012011689v1 M 1269 C 0 s cerAty1.NW_012005268v1 5474747 7 + 7714307 ataaaTA i cerAty1.NW_012005268v1 I 330 C 0 s chlSab2.chr6 29281467 7 + 50890351 ataaata i chlSab2.chr6 I 2719 C 0 s colAng1.NW_012111697v1 2345651 7 + 4274983 ATAAATA i colAng1.NW_012111697v1 C 0 I 788 s calJac3.chr22 28578849 7 + 49145316 ataaata i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422738 7 + 8899380 ATACATA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1631747 7 - 2680843 ATAGGTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 379841 7 - 4471408 ataaata i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363029 0 + 643850 C e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4629763 14 - 122678785 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I e rheMac8.chr19 30225498 661 + 53671032 I a score=173914.000000 s hg38.chr19_GL383574v1_alt 86907 29 + 155864 ACAAATAAAACCCAAATATATTGCTTCCA s panTro5.chr19 36155454 29 + 61309027 acaaataaaaCCCAAATATATTGCTTCCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901689 29 + 64411610 ACAAATAAAACCCAAATATATTGCTTCCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319213 29 - 8369475 ACAAATAAAACCCAAATATATTGCTTCCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912435 29 - 106955855 aaaaataaaacacaaaTATATTGCTTCCA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34678049 29 + 59248254 aATAATAAAACCCAAATATATTGCTTCCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4544878 29 - 13342542 aataataaaACCCAAATATATTGCTTCCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5474754 29 + 7714307 AATAATAAAACCCAAATATATTGCTTCCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29281474 29 + 50890351 aataataaaacccaaATATATTGCTTCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28578856 28 + 49145316 -aaaataaaaCTCAAATATATTGCTTCCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422745 28 + 8899380 -AAAATAAAACTCAAATATATTGCTTCCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1631754 28 - 2680843 -CAAATAAAACTCAAATATATTGCTTCCA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 379848 28 - 4471408 -aaaataaaattcaaatataTTGCTTCCA i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363029 0 + 643850 C e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4629763 14 - 122678785 I e colAng1.NW_012111697v1 2345658 788 + 4274983 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I e rheMac8.chr19 30225498 661 + 53671032 I a score=18175.000000 s hg38.chr19_GL383574v1_alt 86936 4 + 155864 GGTG s panTro5.chr19 36155483 4 + 61309027 GGTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901718 4 + 64411610 GGTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319242 4 - 8369475 GGTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912464 4 - 106955855 GGTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34678078 4 + 59248254 GGCG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4544907 4 - 13342542 GGCG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5474783 4 + 7714307 GGCG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29281503 4 + 50890351 GGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28578884 4 + 49145316 GGAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422773 4 + 8899380 GGAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1631782 4 - 2680843 GGAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 379876 4 - 4471408 GGAG i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 363029 4 + 643850 gact i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4629763 14 - 122678785 I e colAng1.NW_012111697v1 2345658 788 + 4274983 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I e rheMac8.chr19 30225498 661 + 53671032 I a score=27902.000000 s hg38.chr19_GL383574v1_alt 86940 3 + 155864 TCA s panTro5.chr19 36155487 3 + 61309027 TCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901722 3 + 64411610 TCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319246 3 - 8369475 TCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912468 3 - 106955855 TCA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34678082 3 + 59248254 TCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4544911 3 - 13342542 TCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5474787 3 + 7714307 TCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29281507 3 + 50890351 TCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28578888 3 + 49145316 TCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422777 3 + 8899380 TCG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1631786 3 - 2680843 TCA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 379880 3 - 4471408 TCA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4629777 3 - 122678785 TCA i canFam3.chr1 I 14 C 0 s dasNov3.JH563638 363033 3 + 643850 tca i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e colAng1.NW_012111697v1 2345658 788 + 4274983 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I e rheMac8.chr19 30225498 661 + 53671032 I a score=829106.000000 s hg38.chr19_GL383574v1_alt 86943 123 + 155864 ACAAAGTCATGATCCTGAGATTTTGC-CATCACTGCTCTCCTGGGCTACAATTAGAG--TTGCTGGCACCATGTTTTCCATTCCTTTGTTTACTGGAATTTCTCCTTAGGGAGCTTTCTAGACAGG s panTro5.chr19 36155490 123 + 61309027 ACAAAGTCATGATCCTGAGATTTTGC-CATCACTGCTCTCCTGGGCTACAATTAGAG--TTGCTGGCACCATGTTTTCCATTCCTTTGTTTACTGGAATTTCTCCTTAGGGAGCTTTCTAGACAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901725 123 + 64411610 ACAAAGTCATGATCCTGAGATTTTGC-CATCACTGCTCTCCTGGGCTACAATTAGAG--TTGCTGGCACCATGTTTTCCATTCCTTTGTTTACTGGAATTTCTCCTTAGGGAGCTTTCTAGACAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319249 123 - 8369475 ACAAAGTCATGATCCTGAGATTTTGC-CATCACTGCTCTCCTGGGCTACAATTAGAG--TTGCTGGCACCATGTTTTCCATTCCTTTGTTTACTGGAATTTCTCCTTAGGGAGCTTTCTAGACAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912471 123 - 106955855 ACAAAGTCATGATCCTGAGATTTTGC-CGTCACTGCTCTCCTGGGCTAGAATTAGGG--TTGCTGGCACCATGTTTTCCATTCCTTTGTTTACTGGAATTTTTCCTTAAGGAGCTTTCTAGACAGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226159 121 + 53671032 ACAAAGTCACGATCCCGGGATTTTGC-CGTCACTGCTCTCCTGGGCTAGAATTACAG--TTTATGGCACC-TGTTTTCCATTTCTTTGTTTACGGGAGTTTCT-CTTAGGGAGCTTTCTAGACAGT i rheMac8.chr19 I 661 C 0 s macFas5.chr19 34678085 123 + 59248254 ACAAAGTCACGATCCCGGGATTTTGC-CGTCACTGCTCTCCTGGGCTAGAATTACAG--TTACTGGCACCATGTTTTCCATTTCTTTGTTTACGGGAGTTTCTCCTTAGGGAGCTTTCTAGACAGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4544914 123 - 13342542 ACAAAGTCACGATCCCGGGATTTTGC-CGTCACTGCTCTCCTGGGCTAGAATTACAG--TTACTGGCACCATGTTTTCCATTTCTTTGTTTACGGGAGTTTCTCCTTAGGGAGCTTTCTAGACAGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5474790 123 + 7714307 ACAAAGTCACGATCCCGGGATTTTGC-CGTCACTGCTCTCCTGGGCTAGAATTACAG--TTACTGGCACCATGGTTTCCATTTCTTTGTTTACGGGAGTTTCTCCTTAGGGAACTTTCTAGACAGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29281510 123 + 50890351 ACAAAGTCACGATCCCGGGATTTTGC-CGTCACTGCTCTCCTGGGCTAGAATTACAG--TTACTGTCACCATGTTTTCCATTTCTTTGTTTATGTGAGTTTCTCCTTAGGGAGCTTTCTAGACGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28578891 93 + 49145316 --GCAGTCATGATCCTGGGATTTCGA-CTTCAC------------------------------TGAAACCACGTTTTCCATTCCTTTGTTTACTGGAATTCCTCCTCAGGGTGCTTTCTAGATAGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422780 93 + 8899380 --GCAGTCATGATCCTGGGATTTCGC-CTTCAA------------------------------TGGAACCATGTTTTCCATTCCTTTGTTTACTGGAATTCCTCCTCAGGGCGCTTTCTAGACAGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1631789 93 - 2680843 --GCAGTCATGATCATGGGATTTCGC-CTTCAC------------------------------TGGAACCATATTTTCCATTCCTTTGTTTACTGGAATTCCTCCTCAGGGTGCTTTCTAGACGGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 379883 93 - 4471408 --ACAGTCATGATCCTGGGATTTTGC-CTTCAC------------------------------TGGAACCATGTTTTCCATTCCTTTGTTTACTGGAATTCCTCCTTAGGGTGCTTTCTAGACAGT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4629780 121 - 122678785 GCAAAGGGACGATTCTGGGATTTCTCTCTTCACTGCTCTCCTGGATGAGACTCAGAGGTTCATGGATGCCATGTTTTCCA-TCCCTTGTTTGCTAGAATTCTTCCTTAGGGAGCTTTCTAAG---- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 363036 124 + 643850 gcaaagttatgatcctggcatttc-t-cttcactgctctcctgggttagagttacagttttctggatgccatgtttttcattcccttctttgtcagaattcaaccttagggagctttctaaaaaag i dasNov3.JH563638 C 0 I 238 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e colAng1.NW_012111697v1 2345658 788 + 4274983 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I a score=64736.000000 s hg38.chr19_GL383574v1_alt 87066 7 + 155864 AAGGTCT s panTro5.chr19 36155613 7 + 61309027 AAGGTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901848 7 + 64411610 AAGGTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319372 7 - 8369475 AAGGTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912594 7 - 106955855 AAGGTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226280 7 + 53671032 AAGGTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34678208 7 + 59248254 AAGGTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545037 7 - 13342542 AAGGTCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5474913 7 + 7714307 AAGGTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29281633 7 + 50890351 AAGGTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28578984 7 + 49145316 AAGGTCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422873 7 + 8899380 AAAGTCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1631882 7 - 2680843 AAGGTCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 379976 7 - 4471408 AAGGTCT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4629901 7 - 122678785 AAGGTGT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363160 238 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e colAng1.NW_012111697v1 2345658 788 + 4274983 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I a score=134823.000000 s hg38.chr19_GL383574v1_alt 87073 19 + 155864 CTGTCACATCTTCTTCCTC s panTro5.chr19 36155620 19 + 61309027 CTGTCACATCTTCTTCCTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901855 19 + 64411610 CTGTCACATCTTCTTCCTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319379 19 - 8369475 CTGTCACATCTTCTTCATC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912601 19 - 106955855 CTGTCACATCTTCTTCCTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226287 18 + 53671032 CTGTCACA-CTTCTTCCTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34678215 19 + 59248254 CTGTCACACCTTCTTCCTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545044 19 - 13342542 CTGTCACACCTTCTTCCTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5474920 19 + 7714307 CTGTCACACCTTCTTCCTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29281640 19 + 50890351 CTGTCACACCTTCTTCCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28578991 19 + 49145316 CTGTCACATCTTCTTTCTC i calJac3.chr22 C 0 I 10 s saiBol1.JH378197 5422880 16 + 8899380 CTGTCACA---TCTTTCTC i saiBol1.JH378197 C 0 I 10 s cebCap1.NW_016107633v1 1631889 19 - 2680843 CTGTCACATCTTCTTTCTC i cebCap1.NW_016107633v1 C 0 I 10 s aotNan1.NW_018505377v1 379983 19 - 4471408 CTGTCACATCTTCTTTCTC i aotNan1.NW_018505377v1 C 0 I 224 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363160 238 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4629908 0 - 122678785 C e colAng1.NW_012111697v1 2345658 788 + 4274983 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I a score=4185.000000 s hg38.chr19_GL383574v1_alt 87092 9 + 155864 Gtttc------------------tttt s panTro5.chr19 36155639 12 + 61309027 Atttc---------------ttttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901874 11 + 64411610 Atttc----------------tttttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319398 11 - 8369475 Gtttc----------------tttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912620 27 - 106955855 ttttcttttttctttcttttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226305 9 + 53671032 Gtttc----------------tttt-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34678234 9 + 59248254 GTTTC----------------tttt-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545063 9 - 13342542 Gtttc----------------tttt-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5474939 9 + 7714307 GTTTC----------------tttt-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29281659 9 + 50890351 Gtttc----------------tttt-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28579020 5 + 49145316 gtttc---------------------- i calJac3.chr22 I 10 C 0 s saiBol1.JH378197 5422906 11 + 8899380 Gtttc-------------tttttt--- i saiBol1.JH378197 I 10 C 0 s cebCap1.NW_016107633v1 1631918 8 - 2680843 gtttc----------------ttt--- i cebCap1.NW_016107633v1 I 10 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363160 238 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4629908 0 - 122678785 C e aotNan1.NW_018505377v1 380002 224 - 4471408 I e colAng1.NW_012111697v1 2345658 788 + 4274983 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I a score=50408.000000 s hg38.chr19_GL383574v1_alt 87101 8 + 155864 tttttttt s panTro5.chr19 36155651 8 + 61309027 tttttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901885 8 + 64411610 tttttttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319409 8 - 8369475 tttttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912647 8 - 106955855 tttttttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226314 8 + 53671032 cttttttt i rheMac8.chr19 C 0 I 13 s macFas5.chr19 34678243 8 + 59248254 cttttctt i macFas5.chr19 C 0 I 18 s macNem1.NW_012011689v1 4545072 8 - 13342542 cttttttt i macNem1.NW_012011689v1 C 0 I 8 s cerAty1.NW_012005268v1 5474948 8 + 7714307 cttttttt i cerAty1.NW_012005268v1 C 0 I 25 s chlSab2.chr6 29281668 8 + 50890351 ctttcttt i chlSab2.chr6 C 0 I 14 s colAng1.NW_012111697v1 2346446 8 + 4274983 tttttttt i colAng1.NW_012111697v1 I 788 C 0 s calJac3.chr22 28579025 4 + 49145316 ----tttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422917 8 + 8899380 tttttttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1631926 8 - 2680843 tttttttc i cebCap1.NW_016107633v1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363160 238 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4629908 0 - 122678785 C e aotNan1.NW_018505377v1 380002 224 - 4471408 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I a score=231789.000000 s hg38.chr19_GL383574v1_alt 87109 39 + 155864 gagacagagtctcactctgtcgcccaggctggagtgca-g s panTro5.chr19 36155659 39 + 61309027 gagacagagtctcactctgtcacccaggctggagtgca-g i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901893 39 + 64411610 gagacagagtctcactctgtcacccaggctggagtgca-g i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319417 39 - 8369475 gagacagagtctcactctgtcgcccaggctggagtgca-g i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912655 39 - 106955855 gaggcagagtcttgctctgtcgcccaggctggagtgca-g i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226335 40 + 53671032 gagacacagtcttgctctgttgcccaggctggagtgtgtg i rheMac8.chr19 I 13 C 0 s macFas5.chr19 34678269 39 + 59248254 gagacacagtcttgctctgttgcccaggctggagtgta-g i macFas5.chr19 I 18 C 0 s cerAty1.NW_012005268v1 5474981 39 + 7714307 gagacacagtcttgctctgttgcccaggctggagtgta-g i cerAty1.NW_012005268v1 I 25 C 0 s chlSab2.chr6 29281690 39 + 50890351 gagacacagtcttgctctgttgcccaggctggagtgta-g i chlSab2.chr6 I 14 C 0 s colAng1.NW_012111697v1 2346454 39 + 4274983 gagacagagtcttgctctgttgcccaggctggagtgca-g i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579029 38 + 49145316 gagatggagtctcactctg-cacccaggctggagtgca-g i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422925 39 + 8899380 gagacggagtctcgctctgtcgcccaggcttgagtgca-g i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1631934 39 - 2680843 gagacagagtctcgctccatcggccatgctggagtgca-g i cebCap1.NW_016107633v1 C 0 I 173 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363160 238 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4629908 0 - 122678785 C e aotNan1.NW_018505377v1 380002 224 - 4471408 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I e macNem1.NW_012011689v1 4545080 8 - 13342542 I a score=373737.000000 s hg38.chr19_GL383574v1_alt 87148 104 + 155864 cggtgccgtctcggctcactgcagcctctgcctgccagcttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcacccaccaccacacct s panTro5.chr19 36155698 104 + 61309027 cggtgccatctcggctcactgcagcctctgcctgccagcttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcacccaccaccacacct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39901932 104 + 64411610 cggtgccatctcggctcactgcagcctctgcctgccagcttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcacccaccaccacacct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319456 104 - 8369475 cggtgccatctcggctcactgcagcctctgcctgccagcttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcacccaccaccacacct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912694 104 - 106955855 cggtgccatcttggctcactgcagcctctgcctgccggcttcaagtgattctcctgcctcagcctcccgagtagctaggattacaggcacccaccaccacacct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226375 103 + 53671032 ggatgccggctcgtctca-tgcagcctctgcctgccggcttcaagtgattctcctgcctcagccttcccagtagctgggattacaggcacctaccaccatacct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34678308 104 + 59248254 tgatgccggctcggctcactgcagcctctgcctgccggcttcaagtgattctcctgcctcagccttcccagtagctgggattacaggcacctaccaccatacct i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5475020 104 + 7714307 tgatgccgtctcggctcaccgcagcctctgcctgccggcttcaagtgattctcctgcctcagccttcccagtagctgggattacaggcacccaccaccacacct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29281729 104 + 50890351 tgatgccgtctcggctccctgcagcctctgcctgccagcttcaagtgattctcctgcctcagccttcccagtagctgggatgacaggcacccaccaccacacct i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2346493 104 + 4274983 tgatgtcgtctcggctcactgcagcctctgcctaccagcttcaagtgattctcctgcctcagccttcccagtagctgggattacaggcacccaccaccacacct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579067 28 + 49145316 tggcatgatctctgcttactgca----------------------------------------------------------------caccc------------ i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422964 28 + 8899380 tggcatgatctctgcttactgca----------------------------------------------------------------caccc------------ i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363160 238 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4629908 0 - 122678785 C e aotNan1.NW_018505377v1 380002 224 - 4471408 I e cebCap1.NW_016107633v1 1631973 173 - 2680843 I e manLeu1.NW_012102454v1 904841 5434 - 2385121 I e macNem1.NW_012011689v1 4545080 8 - 13342542 I a score=33923.000000 s hg38.chr19_GL383574v1_alt 87252 6 + 155864 ggctga s panTro5.chr19 36155802 6 + 61309027 ggctga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902036 6 + 64411610 ggctga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319560 6 - 8369475 ggctga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912798 6 - 106955855 ggctga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226478 6 + 53671032 ggctaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34678412 6 + 59248254 ggctaa i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5475124 6 + 7714307 ggctaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29281833 6 + 50890351 gactaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 910275 6 - 2385121 ggctaa i manLeu1.NW_012102454v1 I 5434 C 0 s colAng1.NW_012111697v1 2346597 6 + 4274983 gactaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579095 6 + 49145316 agctaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422992 6 + 8899380 agctga i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363160 238 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4629908 0 - 122678785 C e aotNan1.NW_018505377v1 380002 224 - 4471408 I e cebCap1.NW_016107633v1 1631973 173 - 2680843 I e macNem1.NW_012011689v1 4545080 8 - 13342542 I a score=680597.000000 s hg38.chr19_GL383574v1_alt 87258 89 + 155864 tttttgtatttttagtagagacaggatttcaccatgttggccaggctggtctcgaactcctggcctcaggtgatccgcctgccttggcc s panTro5.chr19 36155808 89 + 61309027 tttttgtatttttagtagagacaggatttcaccatgttggccaggctggtctcgaactcctggcctcaggtgatccgcctgccttggcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902042 89 + 64411610 tttttgtatttttagtagagacaggatttcaccatgttggccaggctggtctcgaactcctggcctcaggtgatccgcctgccttggcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319566 89 - 8369475 tttttgtatttttagtagagacaggatttcaccatgttggccaggctggtctcgaactcctggcctcaggtgatccgcctgccttggcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912804 89 - 106955855 tttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcgaactcctggcctcaggtgatctgcctgccttggcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226484 89 + 53671032 tttttgtatttttagtagagatggagtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatctgcctgccttggcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34678418 89 + 59248254 tttttgtatttttagtagagatggagtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatctgcctgccttggcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545088 89 - 13342542 tttttgtatttttagtagagatggagtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatctgcctgccttggcc i macNem1.NW_012011689v1 I 8 C 0 s cerAty1.NW_012005268v1 5475130 89 + 7714307 tttttgtatttttagtagagatggagtttcaccatgttgaccaggctggtctcgaactcctgacctcaggtgatctgcctgccttggcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29281839 89 + 50890351 tttttgtatttttagtagagatggagtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatctgcctgccttggcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 910281 89 - 2385121 tttttgtatttttagtagagatggagtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatctgcctgccttggcc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2346603 89 + 4274983 tttttgtatttttagtagagatggagtttcaccatgttggccaggctggtctcgaactcctgaccttaggtgatctgcctgccttggcc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579101 87 + 49145316 tttttgtatttttagtagaaatggggtttcaccatgttgctcaggctggtcttgaattcctgacctt--gtgatccgcccacctcggct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5422998 87 + 8899380 tttttgtatttttcatagaaatggggtttcaccatgttggtcaggctggtcttgaattcctgacctt--gtgatcggcccagcttggct i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363160 238 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4629908 0 - 122678785 C e aotNan1.NW_018505377v1 380002 224 - 4471408 I e cebCap1.NW_016107633v1 1631973 173 - 2680843 I a score=300028.000000 s hg38.chr19_GL383574v1_alt 87347 41 + 155864 tcacaaagtgctgggattacaggcatcagcctctgtgccca s panTro5.chr19 36155897 41 + 61309027 tcacaaagtgctgggattacaggcatcagcctctgtgccca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902131 41 + 64411610 tcacaaagtgctgggattacaggcatcagcctctgtgccca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319655 41 - 8369475 tcacaaagtgctgggattacaggcatcagcctctgtgccca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912893 41 - 106955855 tcacaaagtgctgggattacaggcatcagcctctgttccca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226573 41 + 53671032 tcacaaagtgctgggattacaggcatcagcctctgcaccca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34678507 41 + 59248254 tcacaaagtgctgggattacaggcatcagcctctgcaccca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545177 41 - 13342542 tcacaaagtgctgggattacaggcatcagcctctgcaccca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5475219 41 + 7714307 tcacaaagtgctgggattacaggcatcagcctctgcaccca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29281928 41 + 50890351 tcacaaagtgctgggattacaggcatcagcctctgcaccca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 910370 41 - 2385121 tcacaaagtgctgggattacaggcatcagcctctgcaccca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2346692 41 + 4274983 tcacaaagtgctgggattacaggcatcagcctctgcaccca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579188 41 + 49145316 tcccaaagtgctggggtaacaggcttgagccatcgtgcccA i calJac3.chr22 C 0 I 5 s saiBol1.JH378197 5423085 41 + 8899380 tcccgaagtcctgggattacagatttgagccatcgtgcctg i saiBol1.JH378197 C 0 C 0 s canFam3.chr1 4629908 30 - 122678785 TCATAAAGGGCC-AGATAGTA-----CAGTCTCTGT----- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363160 238 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e aotNan1.NW_018505377v1 380002 224 - 4471408 I e cebCap1.NW_016107633v1 1631973 173 - 2680843 I a score=15600.000000 s hg38.chr19_GL383574v1_alt 87388 2 + 155864 gc s panTro5.chr19 36155938 2 + 61309027 gc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902172 2 + 64411610 gc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319696 2 - 8369475 gc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912934 2 - 106955855 gc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226614 2 + 53671032 gc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34678548 2 + 59248254 gc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545218 2 - 13342542 gc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5475260 2 + 7714307 gc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29281969 2 + 50890351 gc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 910411 2 - 2385121 gc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2346733 2 + 4274983 gc i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5423126 2 + 8899380 gc i saiBol1.JH378197 C 0 I 7 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363160 238 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4629938 0 - 122678785 C e aotNan1.NW_018505377v1 380002 224 - 4471408 I e cebCap1.NW_016107633v1 1631973 173 - 2680843 I e calJac3.chr22 28579229 5 + 49145316 I a score=200082.000000 s hg38.chr19_GL383574v1_alt 87390 35 + 155864 cCCAGCCTTCTTTGCTTATTTAACAAC------AAAACGTC s panTro5.chr19 36155940 35 + 61309027 cCCAGCCTTCTTTGCTTATTTAACAAC------AAAACGTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902174 35 + 64411610 cCCAGCCTTCTTTGCTTATTTAACAAC------AAAACGTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319698 35 - 8369475 cCCAGCCTTCTTTGCTTATTTAACAAC------AAAACGTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912936 35 - 106955855 cCCAGCCTTCTTTGCTTATTTAACAAC------AAAACATC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226616 35 + 53671032 cCCAGCCGCCTTTGCTTATTTAACAAG------AAAACATC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34678550 35 + 59248254 cCCAGCCGCCTTTGCTTATTTAACAAG------AAAACATC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545220 35 - 13342542 cCCAGCCGCCTTTGCTTATTTAACAAG------AAAACATC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5475262 35 + 7714307 cCCAGCCTTCTTTGCTTATTTAACAAG------AAAACATC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29281971 35 + 50890351 cCCAGCCTTCTTTGCTTATTTAACAAG------AAAACATC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 910413 35 - 2385121 cCCAGCTGCCTTTGCTTATTTAACAAG------AAAACATC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2346735 35 + 4274983 cCCAGCCTTCTTTGCTTATTTAACAAG------AAAACATC i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4629938 41 - 122678785 TACATCAtctttttttaatttaacaaccctttaaaaataca i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363160 238 + 643850 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e aotNan1.NW_018505377v1 380002 224 - 4471408 I e cebCap1.NW_016107633v1 1631973 173 - 2680843 I e saiBol1.JH378197 5423128 7 + 8899380 I e calJac3.chr22 28579229 5 + 49145316 I a score=1712530.000000 s hg38.chr19_GL383574v1_alt 87425 255 + 155864 GAAGCAATTCTTATCTTAGTTGCTGACCCTTGAtctagcatgcagtgatgttaagtctaatgccaatttga-ttttttcttttcattgtagattacctg----tttcttcctctgtggaaacagcatattatcctttctgttaagaaatgtt----atgacttctcaagagtgtgggtctt-tttgtttcactccagtattatgctgggcagttgttaggcccttttgatttaatggtttgtgtctt---ccctttag-----------cttgggtaat s panTro5.chr19 36155975 255 + 61309027 GAAGCAATTCTTATCTTAGTTGCTGACCCTTGAtctagcatgcagtgatgttaagtctaatgccaatttga-ttttttcttttcattgtagattacctg----tttcttcctctgtggaaacagcatattatcctttctgttaagaaatgtt----atgacttctcaagagtgtgggtctt-tttgtttcactccagtattatgctgggcagttgttaggcccttttgatttaatggtttgtgtctt---ccctttag-----------cttgggtaat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902209 255 + 64411610 GAAGCAATTCTTATCTTAGTTGCTGACCCTTGAtctagcatgcagtgatgttaagtctaatgccaatttga-ttttttcttttcattgtagattacctg----tttcttcctctgtggaaacagcatattatcctttctgttaagaaatgtt----atgacttctcaagagtgtgggtctt-tttgtttcactccagtattatgctgggcagttgttaggcccttttgatttaatggtttgtgtctt---ccctttag-----------cttgggtaat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319733 254 - 8369475 GAAGCAATTCTTATCTTAGTTGCTGACCCTTGAtctagcatgcagtgatgctaagtctaatgccaatttga-ttttttcttttcattgtagattacctg----tttcttcctctgtggaaacagcatattatcctttctgttaagaaatgtt----atgacttctc-agagtgtgggtctt-tttgtttcactccagtcttatgctgggcagttgttagacccttttgatttaatggtttgtgtctt---ccctttag-----------cttgggtaat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63912971 254 - 106955855 GAAGCAATTCTTACCTTAGTTGCTGACCCTTGAtctagcatgcagtgatgctaagtctaatgccaatttga-ttttttcttttcattgtaaattacctg----ttttttcctctgtggaaacagcgtattatcctttctgttaagaaatgtt----atgacttctc-agagtgtgggtctt-tttgtttcactccaggattatgctgggcagttggtaggcccttttgatttaatggtttgtgtctc---ccctttag-----------cttgggtaat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226651 263 + 53671032 AAAGCAATTCTTATCTTAGTTGCTGACCCTTGACctagcatgcagtgatgctaagtctaatgccaattgga-ttttttcttttcattgtagatgacctg----ttttttcctctgtggaaacagc--atgatcctttctgttaagaaatgtt----atgacttctc-agagtgtgggtctt-tttgtttcactccagtattatgctgggcagttggtaggcccttttgatttaatggtttgtgtctt---ccctttagctctctttttacttggataaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34678585 263 + 59248254 AAAGCAATTCTTATCTTAGTTGCTGACCCTTGACctagcatgcagtgatgctaagtctaatgccaattgga-ttttttcttttcgttgtagatgacctg----ttttttcctctgtggaaacagc--atgatcctttctgttaagaaatgtt----atgacttctc-agagtgtgggtctt-tttgtttcactccagtattatgctgggcagttggtaggcccttttgatttaatggtttgtgtctt---ccctttagctctctttttacttggataaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545255 264 - 13342542 AAAGCAATTCTTATCTTAGttgctgacccttgacctagcatgcagtgatgctaagtctaatgccaattggatttttttcttttcattgtagatgacctg----ttttttcctctgtggaaacagc--atgatcctttctgttgagaaatgtt----atgacttctc-agagtgtgggtctt-tttgtttcactccagtattatgctgggcagttggtaggcccttttgatttaatggtttgtgtctt---ccctttagctctctttttacttggataaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5475297 263 + 7714307 AAAGCAATTCTTATCTTAGttgctgacccttgacctagcatgcagtgatgctaagtctaatgccaattgga-ttttttcttttcattgtagatgacctg----ttttttcctctgtggaaacagc--atgatcctttctgttaagaaatgtt----atgacttctc-agagtgtgggtctt-tttgtttcactccagtattatgctgggcatttggtaggcccttttgatttaatggtttgtgtctt---ccctttagctctctttttacttggataat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29282006 264 + 50890351 AAAGCAATTCTTATCTTAGTTGCTGACCCTTGACctagcatgcagtgatgctaagtctaatgccaattggatttttttcttttcattgtagatgacctg----ttttttcctctgtggaaacagc--attgtcctttctgttaagaaatgtt----atgacttctc-agagtgtgggtctt-tttgtttcactccagtgttctgctgggcagttggtaggcccttttgatttaatggtttgtgtctt---ccctttagctctctttttacttggataat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 910448 263 - 2385121 AAAGCAATTCTTATCTTAGttgctgacccttgacctagcatgcagtgatgctaagtctaatgccaattgga-ttttttcttttcattgtagatgacctg----ttttttcctctgtggaaacagc--attatcctttctgttaagaaatgtt----atgacttctc-agaatgtgggtctt-tttgtttcactccagtattatgctgggcagttggtaggcccttttgatttaatggtttgtgtctt---ccctttagctccctttttacttggataat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2346770 263 + 4274983 AAAGCAATTCTTATCTTAGttgctgacccttgacctatcatgcagtgatgctaagtctaatgccgatttga-tttttccttttcattgtagatgacctg----ttttttcctctgtggaaacagc--attatcctttctgttaagaaatgtt----atgacttctc-agagtgtgggtctt-tttgtttccctccagtattatgctgggcagttggtagccccttttgatttaatggcttgtgtctt---ccctttagctctctttttacttggataat i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4629979 258 - 122678785 aagcccactcttggctcaattgctgacccttgatctaatactcagtaatgctaaatccgatgcc-atctga-ttct---ttttcattatagatgacagg----ttttctcctctctggaaacttcacgttgtcctttgtgttaaattttata----atgacttctc-tggggatgggtc----ttgttttatcccactgttaccctgaacagc--gtagactcttttgatttaaagatttgtgtgtttaactctttctcttatgactt-cttgggtaat i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 363398 261 + 643850 aaaaaaattcttagctcagttgccaaccc-tgatctagcatgcagtagtgctaaatctgataccagtctga-ttct---ctttcattgtagatgacctgttttttttttcctttctggaaatttaatgttatccttggtattatgagatttttataatgatttctc-tggatgtgggtcttctttgctttatctgaattttatgctgggcagttggtaggcctgtttgacttaaaggtttgtgtctt---ccctttagct---------ctttgataat i dasNov3.JH563638 I 238 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e aotNan1.NW_018505377v1 380002 224 - 4471408 I e cebCap1.NW_016107633v1 1631973 173 - 2680843 I e saiBol1.JH378197 5423128 7 + 8899380 I e calJac3.chr22 28579229 5 + 49145316 I a score=24752.000000 s hg38.chr19_GL383574v1_alt 87680 2 + 155864 tt s panTro5.chr19 36156230 2 + 61309027 tt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902464 2 + 64411610 tt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319987 2 - 8369475 tt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913225 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226914 2 + 53671032 tt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34678848 2 + 59248254 tt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545519 2 - 13342542 tt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5475560 2 + 7714307 tt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29282270 2 + 50890351 tt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 910711 2 - 2385121 tt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2347033 2 + 4274983 tt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579234 2 + 49145316 TT i calJac3.chr22 I 5 C 0 s saiBol1.JH378197 5423135 2 + 8899380 TT i saiBol1.JH378197 I 7 C 0 s aotNan1.NW_018505377v1 380226 2 - 4471408 TT i aotNan1.NW_018505377v1 I 224 C 0 s canFam3.chr1 4630237 2 - 122678785 tt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 363659 2 + 643850 tt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e cebCap1.NW_016107633v1 1631973 173 - 2680843 I a score=582368.000000 s hg38.chr19_GL383574v1_alt 87682 53 + 155864 ttttcATACCA--TCCTCCCTGTACTTTC-ACTAGAAGTCTCTTTTACTCAGATAT s panTro5.chr19 36156232 53 + 61309027 ttttcATACCA--TCCTCCCTGTACTTTC-ACTAGAAGTCTCTTTTACTCAGATAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902466 53 + 64411610 ttttcATACCA--TCCTCCCTGTACTTTC-ACTAGAAGTCTCTTTTACTCAGATAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6319989 53 - 8369475 ttttcatacca--tcctccctgtactttc-actagaagtctcttttactctgatat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913227 53 - 106955855 ttttcATACCA--TCCTCCCTGTACTTTC-ACTAGAAGTCTCTTTTACTCAGATAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226916 53 + 53671032 ttttcatatca--ttctccctctgctttc-actggaggtttcttttactcagatat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34678850 53 + 59248254 ttttcatatca--ttctccctctgctttc-actggaggtttcttttactcagatat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545521 53 - 13342542 ttttcatatca--ttctccctctgctttc-actggaggtttcttttactcagatat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5475562 53 + 7714307 ttttcatacca--ttctccctgtgctttc-actggaagtctcttttactcagatat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29282272 53 + 50890351 ttttcatatca--ttctccctgtgctttc-actggaagtctcttttactcagatat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 910713 53 - 2385121 ttttcatacca--ttctccctgtgctttc-actggaagtctcttttactcagatat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2347035 54 + 4274983 ttttcgtacca--ttctccctgtgctttcaactggaagtctcttttactcagatat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579236 55 + 49145316 TTATCATACCATTTTCTCCCTGTGCTTTC-ACTAGAAGTTTCTTTTACTTAGATAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423137 53 + 8899380 TTTTCATACCA--TCCTCCCTGTGCTTTC-ACTAGAAGTCTCTTTTACTTAGATAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1632146 53 - 2680843 TTTTCATACCA--TCCTCCCTGTGCTTTC-ACTAGAAGTCTCTTTTACTTAGATAT i cebCap1.NW_016107633v1 I 173 C 0 s aotNan1.NW_018505377v1 380228 53 - 4471408 TTTTCATACCA--TCCTCCCTGTGCTTTC-ACTAGAAGTCTCTTTTATTTAGATAT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4630239 51 - 122678785 ctttcatacca--cgcacactgttctttt-tcactaaatctccct--cttagatat i canFam3.chr1 C 0 I 33 s dasNov3.JH563638 363661 53 + 643850 tttggattcca--ccctctctgttctttc-actagaactccctattgatcaaacgt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I a score=181711.000000 s hg38.chr19_GL383574v1_alt 87735 16 + 155864 AAGAGCTGCCCATTCg s panTro5.chr19 36156285 16 + 61309027 AAGAGCTGCCCATTCg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902519 16 + 64411610 AAGAGCTGCCCATTCg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320042 16 - 8369475 aagagctgcccattcg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913280 16 - 106955855 AAGAGCTGCCCATTCg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226969 16 + 53671032 aagagctgcccatttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34678903 16 + 59248254 aagagctgcccatttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545574 16 - 13342542 aagagctgcccatttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5475615 16 + 7714307 aagagctgcccatttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29282325 16 + 50890351 aagagctgcccatttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 910766 16 - 2385121 aagagctgcccatttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2347089 16 + 4274983 aagagctgcccatttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579291 16 + 49145316 AAAAGCTGCCCATTTg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423190 16 + 8899380 AAAAGCTGCCCATTCg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1632199 16 - 2680843 AAAAGCTGCCCATTCg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 380281 16 - 4471408 AAAAGCTGCCCATTTg i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 363714 15 + 643850 -agagctttcaatttg i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4630290 33 - 122678785 I a score=1422330.000000 s hg38.chr19_GL383574v1_alt 87751 165 + 155864 gccgggcatggtggctgacacctgtaatcccagcactttgggaggctgaggcggtcggatcactcgaggccaggagtttgagaccagccaggccaacatggtgaaaccccatctctactaaactac-aaaaattacttgggcatggtggcacatgcctgtagtccc s panTro5.chr19 36156301 165 + 61309027 gccgggcatggtggctgacacctgtaatcccagcactttgggaggctgaggcggtcggatcactcgaggccaggagtttgagaccagccaggccaacatggtgaaaccccatctctactaaactac-aaaaattacttgggcatggtggcacatgcctgtagtccc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902535 165 + 64411610 gccgggcatggtggctgacacctgtaatcccagcactttgggaggctgaggcggtcggatcactcgaggccaggagtttgagaccagccaggccaacatggtgaaaccccatctctactaaactac-aaaaattacttgggcatggtggcacatgcctgtagtccc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320058 165 - 8369475 gccgggcatggtggctgacacctgtaatcccagcactttgggaggctgaggcggtcggatcactcgaggccaggagtttgagacccgccaggccaacatggtgaaaccccatctctactaaactac-aaaaattacttgggcatggtggcacatgcctgtagtccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913296 164 - 106955855 gccgggcatggtggctcacacctgtaatcccagcactttgggaggctgaggcaggc-gatcactcgaggccaggagtttgagaccagccaggccaacatggtgaaaccccatctctactaaactac-aaaaattacttgggcatggtggcacgtgcctgtagtccc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30226985 165 + 53671032 gccgggcacggtggctcacacctgcagtcccagcactttgggaggctgaggcaggcggatcacttgaggccagcagtttgagaccagccaggccaacatagtgaaactccatctctactacactac-aaaaattcattgggcctggtggcgcgtgcctgtaatccc i rheMac8.chr19 C 0 I 7 s macFas5.chr19 34678919 165 + 59248254 gccgggcacggtggctcacacctgcagtcccagaactttgggaggctgaggcaggcggatcacttgaggccagcagtttgagaccagccaggccaacatggtgaaacttcatctctactacactac-aaaaattcattgggcctggtggcgcgtgcctgtaatccc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545590 165 - 13342542 gccgggcacggtggctcacacctgcagtcccagcactttgggaggctgaggcaggcggatcacttgaggccagcagtttgagaccagccaggccaacatggtgaaactccatctctactacactac-aaaaattcattgggcctggtggcgcgtgcctgtaatccc i macNem1.NW_012011689v1 C 0 I 7 s cerAty1.NW_012005268v1 5475631 165 + 7714307 gccgggcatggtggctcgtacctgcaatcccagcactttgggagactgaggcaggcggatcacttgcggccagcagtttgagaccagccaggccaacatggtgaaactccatctctactaaactac-aaaaattcgttgggcatggtggcgcgtgcctgtaatccc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29282341 166 + 50890351 gccgggcatggtggctcgcacctgcaatcccagcacgttgggaggctgaggcgggcggatcacttgaggccagcagtttgagaccagccaggccaacatggtgaaactccatctctactaaactacaaaaaattcattgggcatggtggcgcgtgcctgtaatccc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 910782 165 - 2385121 gccgggcatggtggctcatacctgcaatcccagcactttgggagactgaggcaggcggatcacttgtggccagcagtttgagaccagccaggccaacatggtgaaactccatctctactaaactac-aaaaattcgttaggcctggtggcgcgtgcctgtaatccc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2347105 165 + 4274983 gccgggcatggtggctcacacctgcaatctgagcactttgggaggctgaggcaggcggatcacttgaggccagcagtttgagaccagccaggccaacatggcgaaactccatctctactaaactac-aaaaattcgttgggcgtggtggtgcgtgcctgtaatccc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579307 159 + 49145316 gccagatgcagtggctcatgcctgtatttccagcactttgggaggctgaggcaggcagatcacttgaggccaggagtttgagaccagcttggccaacatggtgaaacc------ctacgaaattac-aaaaattagcctggctgggtgatgcatgactgttatccc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423206 131 + 8899380 gccgggtgcagtagctcatgcctctacttccagcacttt----------------------------------gagtttgagaccagcttggccaacatgattaaaccctatctctacgaaattac-aaaaattagcctggctgggtggcccatgactgctgtccc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1632215 165 - 2680843 gccgggtgcagcagctcatgcctgtacttccagcattttgggaggctgaggcaggcagatcacttgaggccacgagtttgagaccagcttggccaacatgatgaaatcctatctctacaaaattac-aaaaattagcctggctgggtggtacatgactgctgtccc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 380297 165 - 4471408 gccgggtgcagtagctcatgcctgtacttccagcactttgggaggctgaggcaggcagatcacttgaggccacgagtttgagaccagcttggccaacatggtgaaaccctatctctacgaaattac-acaaattagcctggctgggtggtacatgactgttgtccc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363729 0 + 643850 C e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4630290 33 - 122678785 I a score=175477.000000 s hg38.chr19_GL383574v1_alt 87916 29 + 155864 agctactcgggaggctgagtcaggagaat s panTro5.chr19 36156466 29 + 61309027 agctactcgggaggctgaggcaggagaat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902700 29 + 64411610 agctactcgggaggctgaggcaggagaat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320223 29 - 8369475 agctactcgggaggctgaggcaggagaat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913460 29 - 106955855 agctactcgggaggctgaggcaggagaat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34679084 7 + 59248254 --------------ttgaacc-------- i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5475796 29 + 7714307 agctactcaggaggctgaggcaggagaat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29282507 29 + 50890351 agctactcaggaggctgaggcaggagaat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 910947 29 - 2385121 agctactcaggaggctgaggcaggagaat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2347270 29 + 4274983 cgctactcaggaggctgaggcaggagaat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579466 29 + 49145316 agctattcaggaggctgaggcaggagaat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423337 28 + 8899380 agct-ttcaggaggctgaggcaagagaat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1632380 29 - 2680843 agctattcaggaggctaagggaggaggat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 380462 29 - 4471408 agctattcaggagactgaggcaggagaat i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363729 0 + 643850 C e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4630290 33 - 122678785 I e macNem1.NW_012011689v1 4545755 7 - 13342542 I e rheMac8.chr19 30227150 7 + 53671032 I a score=826637.000000 s hg38.chr19_GL383574v1_alt 87945 104 + 155864 cgtttgaacgtgggaggtggaggttgcagtgagccgagatcgcaccactgcactccagcctgagcgacagagagaggctccatctc------------aaataa-ataaataaataa s panTro5.chr19 36156495 116 + 61309027 cgtttgaacgtgggaggtggaggttgcagtgagccgagatcgcaccactgcactccagcctgagcgacagagcgaggctccatctcaaataaataaataaataa-ataaataaataa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902729 104 + 64411610 cgtttgaacgtgggaggtggaggttgcagtgagccgagatcgcaccactgcactccagcctgagcgacagagcgaggctccatctc------------aaataa-ataaataaataa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320252 108 - 8369475 cgtttgaacctgggaggtggaggttgcagtgagccgagatcgcaccactgcactccagcctgagcgacagagcgaggctccatctc--------aaataaataa-ataaataaataa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913489 104 - 106955855 catttgaacctgggaggtggaggttgcagtgagccgagatcacgccactgcactccagcctgagcgacagagcgaggctccgtctc------------aaaaaa-gtaaataaataa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30227157 102 + 53671032 cgcttgaacccgggaggtggaggttgcagtgagccgagatcacgctactgcactccagcctggaggacagagtgggactccgtctc------------aaaaaa-aaacaaaaat-- i rheMac8.chr19 I 7 C 0 s macFas5.chr19 34679091 102 + 59248254 cgcttgaacccgggaggtggaggttgcagtgagccgagatcacgctactgcactccagcctggaggacagagcgggactccgtctc------------aaaaaa-aaacaaaaat-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545762 102 - 13342542 tgcttgaacccgggaggtggaggttgcagtgagccgagatcacgctactgcactccagcctggaggacagagcgggactccgtctc------------aaaaaa-aaacaaaaat-- i macNem1.NW_012011689v1 I 7 C 0 s cerAty1.NW_012005268v1 5475825 96 + 7714307 cacttgaacccgggaggtggaggttgcagtgagccgagatcacgctactacactccagcctggaggacagagcgggactccgtctg------------aaaaaa-aaaa-------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29282536 102 + 50890351 cgcttgaacccgggaggtggaggttgtagtgagccgagatcacgctactgcactccagcctggaggacagagcgggactccatctc------------aaaaaa-aaaaaaaaat-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 910976 105 - 2385121 cgcttgaacccgggaggtggaggatgcagtgagccgagatcacgctactgcacaccagcctggaggacagagggggactccgtctc---------aaaaaaaaa-aaaaaaaaat-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2347299 104 + 4274983 cgcttgaacccgggaggtggaggttgcagtgagccgagatcatgctactacactccagcctggaggacagagcgggactccgtctc----------aaaaaaaa-aaaaaaaaat-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579495 103 + 49145316 catttaaacctgggaggcagaggttgcagtgagccaagattgcaccactgcactccagcctgggctacagagcaagactccatctc------------aaaaaaagaaaaaaaaT-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423365 101 + 8899380 cacttaaacccgggaggcagaggttgcagtgagccaagattgcaccactgcactccagactgggctacagagcaagactccatctc------------aaaaaa--gaaaaaaaT-- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1632409 101 - 2680843 cacttaaacccgggaggcagaggttgtggtgagccaagattgcaccactgcactccagcctgggctacagaacaagactccatctc------------aagaaa--gaaaaaaaT-- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 380491 97 - 4471408 cacttaaattcgggaggcagaggttgcggtgagccaagattgcaccactgcactccagcctgggctacagagcaagactccatctc------------aaaaaa------aaaaC-- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363729 0 + 643850 C e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4630290 33 - 122678785 I a score=73779.000000 s hg38.chr19_GL383574v1_alt 88049 15 + 155864 ataaataaatccctg- s panTro5.chr19 36156611 15 + 61309027 ataaataaatCCCTG- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902833 15 + 64411610 ataaataaatCCCTG- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320360 15 - 8369475 ataaataaatccctg- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913593 10 - 106955855 ataaaT-----CCCG- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30227259 10 + 53671032 -----tcaatccctg- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34679193 10 + 59248254 -----tcaatccctg- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545864 10 - 13342542 -----tcaatccctg- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5475921 10 + 7714307 -----tcaatccctg- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29282638 10 + 50890351 -----taaatccctg- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 911081 10 - 2385121 -----tcaatccctg- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2347403 10 + 4274983 -----tcaatccctg- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579598 10 + 49145316 -----TTAATCCCTG- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423466 10 + 8899380 -----TTAATCCCTG- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1632510 10 - 2680843 -----TTAATCCCTG- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 380588 10 - 4471408 -----TTAATCCCTG- i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 363729 15 + 643850 ataa-ttgatcttttg i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4630290 33 - 122678785 I a score=359968.000000 s hg38.chr19_GL383574v1_alt 88064 36 + 155864 tatctcttagttttttctgcta----tttt-ctttcctttg s panTro5.chr19 36156626 36 + 61309027 TATCTCTTAGTTTTTTCTGCTA----TTTT-CTTTCCTTTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902848 36 + 64411610 TATCTCTTAGTTTTTTCTGCTA----TTTT-CTTTCCTTTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320375 37 - 8369475 tatctcttagttttttctgcta----ttttcctttcctttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913603 36 - 106955855 TATCTCTTAGTTTTTTCTGCTA----TTTT-CTTTCCTTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30227269 36 + 53671032 tatctcttagttttttctgcta----tttt-ctttcctttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34679203 36 + 59248254 tatctcttagttttttctgcta----tttt-ctttcctttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545874 36 - 13342542 tatctcttagttttttctgcta----tttt-ctttcctttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5475931 36 + 7714307 tatctcttagttttttctgcta----tttt-ctttcctttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29282648 36 + 50890351 tatctcttagttttttctgcta----tttt-ctttcctttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 911091 36 - 2385121 tatctcttagttttttctgcta----tttt-ctttcctttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2347413 36 + 4274983 tatctcttagttttttctgcta----gttt-ctttcctttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579608 37 + 49145316 TACCTCTAGTTTTTTTCTCCTA---TTTTT-TTTTCCTTTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423476 37 + 8899380 TATCTCTTAGTTTTTTTTCTCC---TATTT-TTTTCCTTTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1632520 40 - 2680843 TATCTCTTAGTTTTTTTTCTCCTATTTTTT-TTTTCCTTTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 380598 38 - 4471408 TATCTCTTAGTTTTTTTTTCCT--ATTTTT-GTTTCCTTTG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4630323 36 - 122678785 tttttttttttttttcctcata----tttt-ctttccttat i canFam3.chr1 I 33 I 2 s dasNov3.JH563638 363744 35 + 643850 tgtttcttagccttttctcata----tttt-ctttcctta- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 587734 2371 + 2501019 I e micMur3.chr22 3971162 4583 - 30143674 I e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I a score=200112.000000 s hg38.chr19_GL383574v1_alt 88100 17 + 155864 ctattgttcatcttagt s panTro5.chr19 36156662 17 + 61309027 CTAttgttcatcttagt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902884 17 + 64411610 CTAttgttcatcttagt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320412 17 - 8369475 ctattgttcATCTTagt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913639 17 - 106955855 CTATTGTTTATCTTagt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30227305 17 + 53671032 CTATTGTTTATCTTGGt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34679239 17 + 59248254 CTATTGTTTATCTTGGt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545910 17 - 13342542 CTATTGTTTATCTTGGt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5475967 17 + 7714307 CTATTGTTTATCTTGGt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29282684 17 + 50890351 CTATTGTTTATCTTGGt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 911127 17 - 2385121 CTATTGTTTATCTTGGt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2347449 17 + 4274983 ctattgtttatcttggt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579645 17 + 49145316 CTATAGTTTATCTTGGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423513 17 + 8899380 CTATCGTTTATCTTGGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1632560 17 - 2680843 CTATGGTTTTTCTTGGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 380636 17 - 4471408 CTATGGTTTATCTTGGT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 590105 17 + 2501019 CTATtatttatcttggt i proCoq1.NW_012149263v1 I 2371 C 0 s canFam3.chr1 4630361 17 - 122678785 tGATTGTCAATCTTGGT i canFam3.chr1 I 2 C 0 e micMur3.chr22 3971162 4583 - 30143674 I e dasNov3.JH563638 363779 0 + 643850 C e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I a score=412649.000000 s hg38.chr19_GL383574v1_alt 88117 34 + 155864 ctctttcctgtagtaggct-ttattaaaatatcag s panTro5.chr19 36156679 34 + 61309027 ctctttcctgtagtaggct-ttattaaaatatcag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902901 34 + 64411610 ctctttcctgtagtaggct-ttattaaaatatcag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320429 33 - 8369475 ctctttcctgtagtaggct-ttattaaaat-tcag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913656 34 - 106955855 ctcttttctgtagtaggct-ttattaaaatatcag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30227322 31 + 53671032 ctctttcctgtagtaggct-ttattaaaat---ag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34679256 31 + 59248254 ctctttcctgtagtaggct-ttattaaaat---ag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545927 31 - 13342542 ctctttcctgtagtaggct-ttattaaaat---ag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5475984 31 + 7714307 ctctttcctgtagtagact-ttattaaaat---ag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29282701 31 + 50890351 ctctttcctgtagtaggct-ttattaaaat---ag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 911144 31 - 2385121 ctctttcctgtagtaggct-ttattaaaat---ag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2347466 31 + 4274983 ctctttcctgtagtaggct-ttattaaaat---ag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579662 34 + 49145316 TTCTTTCCCGTAGTAGGCT-TTATTAAAACATCAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423530 34 + 8899380 TTCTTTCCTGTAGTAGGCT-TTATTAAAATATCAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1632577 34 - 2680843 TTCTTTCCTGCAGTAGGCT-TTATTAAAATATCAG i cebCap1.NW_016107633v1 C 0 I 359 s aotNan1.NW_018505377v1 380653 34 - 4471408 TTCTTTCCTGTAGTAGGCT-TTATTAAAATATCGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3975745 34 - 30143674 cTCTTTCCTGCAGTACACT-TTATTAAAATACCTG i micMur3.chr22 I 4583 C 0 s proCoq1.NW_012149263v1 590122 34 + 2501019 ctcttccctgcagtacact-ttattaaaatacctg i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4630378 35 - 122678785 TTCCTTCCTGTAACATACTCTCATTCACATATCTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 363779 29 + 643850 -----tcctGTAGTAGACC-TTATTCAAACGCCTG i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I a score=423283.000000 s hg38.chr19_GL383574v1_alt 88151 48 + 155864 tggattcttggctgtctgtcattagaagg--aggcaaacggg-tgccctgg s panTro5.chr19 36156713 48 + 61309027 cggattcttggctgtctgtCATTAGAAGG--AGGCAAACGGG-TGCCCTGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902935 48 + 64411610 cggattcttggctgtctgtCATTAGAAGG--AGGCAAACGGG-TGCCCTGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320462 48 - 8369475 cggattcttggctgtctgTCATTAGAAGG--AGGCAAACAGG-TGCCCTGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913690 48 - 106955855 cggattcttggctgtctgTCATTAGAAGG--AGGCAAACGGG-TGCCCTGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30227353 48 + 53671032 cggattcttggctggctgTCATTAGAAGG--AGGCAAAGAGG-TGCCCTGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34679287 48 + 59248254 cggattcttggctggctgTCATTAGAAGG--AGGCAAAGAGG-TGCCCTGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4545958 48 - 13342542 cggattcttggctggctgTCATTAGAAGG--AGGCAAAGAGG-TGCCCTGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5476015 48 + 7714307 cggattcttggctggctgTCATTAGAAGG--AGGCAAAGAGG-TGCCCTGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29282732 48 + 50890351 cggattcttggctggctgTCATTAGAAGG--AGGCAAAGAGG-TGCCGTGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 911175 48 - 2385121 cggattcttggctggctgTCATTAGAAGG--AGGCAAAGAGG-TGCCCTGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2347497 48 + 4274983 cggattcttggctgtctgtcattagaagg--aggcaAAGAGG-TTCCCTGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579696 25 + 49145316 AGGATTCTTGG----CTGTCATTAGAAGG---------------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423564 25 + 8899380 AGGATTCTTGG----CTGTCATTAAAAGG---------------------- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 380687 27 - 4471408 AGGATTCTTGG----CTGTCATTAGAAGGAG-------------------- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3975779 49 - 30143674 AGGATTCTTGGTTGTCTGTCATTAGAAAG--AGGCAGAAACGTTGCCCTGG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 590156 49 + 2501019 aggattcttggttgtctgtcattagaagg--aggcagaaaagctgccctgg i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4630413 48 - 122678785 AAGATTCTTGGTTGTGTTTCATTCGAAAG--AAGCAGAATTG-TTGCCAGG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 363808 45 + 643850 AGGATTCTTGG----TTGTCATAAGAAGA--AAGCAGAACAGTTGCCCTGG i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e cebCap1.NW_016107633v1 1632611 359 - 2680843 I a score=1553908.000000 s hg38.chr19_GL383574v1_alt 88199 119 + 155864 agctctctgtgtgaccaggatttgttaaccagcagtgtcagctttaaggtagtga----tctTTATTCTTGAGATTTCCGAATTCCAGAGGGCTTTGTTGTAGGATGCCA---ATCTCTCCAGATC s panTro5.chr19 36156761 119 + 61309027 AGCTCTCTGTGTGACCAGGATTTGTTAACCAGCAGTGTCTGCTTTAAGGTAGTGA----TCTTTATTCTTGAGATTTCTGAATTCCAGAGGGCTTTGTTGTAGGATGCCA---ATCTCTCCAGATC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39902983 119 + 64411610 AGCTCTCTGTGTGACCAGGATTTGTTAACCAGCAGTGTCTGCTTTAAGGTAGTGA----TCTTTATTCTTGAGATTTCTGAATTCCAGAGGGCTTTGTTGTAGGATGCCA---ATCTCTCCAGATC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320510 119 - 8369475 AGCTCTCTGTGTGACCAGGATTTGTTAACCAGCAGTGTCTGCTTTAAGGTAGTGA----TCTTTATTCTTGAGATTTCTGAATTCCAGAGGGCTTTGTTGTAGGATGCCA---ATCTCTCCAGATC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913738 119 - 106955855 AGCTCTCTGTGTGACCAGGATTTGTTAACCAGCAGTGTTTGCTTTAAGATAGTGA----TATTTATTCTTGAGATTTCTGAATTCCAGAGGGCTTTGTTGTAGGATGCCA---ATCTCTCCAGATC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30227401 119 + 53671032 CGCGCTCTGTGTGACCAGGATTTATTAACCGGAAGTGTTTGCTTTAAGGTAGTGA----TCTTTATTCTTGAGATTTCTGAATTCCAGAGGGCTTTGTTGTAGGACGCCA---ATCTCTCCAGATC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34679335 119 + 59248254 CGCGCTCTGTGTGACCAGGATTTATTAACCGGAAGTGTTTGCTTTAAGGTAGTGA----TCTTTATTCTTGAGATTTCTGAATTCCAGAGGGCTTTGTTGTAGGACGCCA---ATCTCTCCAGATC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4546006 119 - 13342542 CGCGCTCTGTGTGACCAGGATTTATTAACCGGAAGTGTTTGCTTTAAGGTAGTGA----TCTTTATTCTTGAGATTTCTGAATTCCAGAGGGCTTTGTTGTAGGACACCA---ATCTCTCCAGATC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5476063 119 + 7714307 CACGCTCTGTGTGACCAGGATTTATTAACCGGAAGTGTTTGCTTTAAGGTAGTGA----TCTTTATTCTTGAGATTTCTGAATTCCAGAGGGCTTTGTTGTAGGACGCCA---ATCTCTCCAGATC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29282780 119 + 50890351 CGCGCTCTGTGTGATCAGGATTTATTAACCGGAAGTGTTTGCTTTAAGGTAGTGA----TCTTTATTCTTGAGATTTCTGAATTCCAGAGGGCTTTGTTGTAGGACGCCA---GTCTCTCCAGATC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 911223 119 - 2385121 TGCGCTCTGTGTGACCAGGATTTGTTAACCGGAAGTGTTTGCTTTAAGGTAGTGA----TCTTTATTCTTGAGATTTCTGAATTCCAGAGGGCTTTGTTGTAGGACGCCA---ATCTCTCCAGATC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2347545 119 + 4274983 CGCTCTCTGTGTGACCAGGATTTATTAACCGGAAGTGTTTGCTTTAAGGTAGTGA----TCTTTATTCTTGAGATTTCTGAATTCCAGAGGGCTTTGTTGTAGGATGCCA---ATCTCTCCAGATC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579721 119 + 49145316 AGCTCTCTGTGTCACCAGGATTTGTTAACTAGCAGTGTTTGCTTTAAGGTAGTGA----TCTTTATTCTTGAGATTTCTGAATTCCAGAGGGCTTTGTTGTAGGATGCCA---ATCTCTTCAGCTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423589 118 + 8899380 AGCTCTCTGTGTGACCAGGATTTGTTAACTAGCAGTGTTTGCTTTAAGGTAGTGA----TCTTTA-TCTTGAGATTTCTGAATACCAGAGGGCTTTATTGTAGGATGCCA---ATCTCTTCAGCTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1632970 119 - 2680843 AGCTCTCTGTGTGACCAGGATTTGTTAACTAGCAGTGTTTGCTTTAAGGTAGTGA----TCTTTATTCTTGAGATTTCTGAATCCCAGAGGGCTCTGTTGTAGGATGCCA---ATCTCTTCAGCTC i cebCap1.NW_016107633v1 I 359 C 0 s aotNan1.NW_018505377v1 380714 117 - 4471408 --CTCTCTGTGTGACCAGGATTTGTTAACTAGCAGCGTTTGCTTTAAGGTAGTGA----TCTTTATTCTTGAGATTTCTGAATTCCAGAGGGCTTTGTTGTAGGATGCCA---ATCTCTTCAGCTC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3975828 122 - 30143674 AGCTCTTTGTGTGACCAGGATTTGTCAACTTGCAGTGCTTGCTTCAAGGCGGTGA----TCTTTATCCTTGCGATCTCTGAATTCCAGGGGCCTTTGTTTGAGGGTACCAGTGGTATCTCCAGATC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 590205 118 + 2501019 agctgtgtgtgtgaccaggatttgtcaacttgcagtgtgtgctttaaggt-gtga----tcCTTATCCTTGAGATCTCTGAATTCCAGAGGCCTTTGTTTTAGGGTACCA---GGATCTCCAGATC i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4630461 121 - 122678785 AGCTCTTTTTGTGGCCAGAA-TTGTCATCTGGCAGGGT-TGCTTTAAGGTAGTGACAGCTCCTTATTTTTGAGATCTCTGAATTCCAGAAGGCTTTGTCCAGAGGTGCCA---ATATGCACAAATC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 363853 54 + 643850 ------------------------------------------------------A----ACT----CCTTAAGAACCCTGACTTCCAGAAGGTTTTGTTCTGGGATCCTA---ATAACC------- i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5490491 138 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I a score=364428.000000 s hg38.chr19_GL383574v1_alt 88318 29 + 155864 CCACAGATGTCTA-CAGAGAAGAATCTTCC s panTro5.chr19 36156880 29 + 61309027 CCACAGATGTCTA-CAGAGAAGAATCTTCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39903102 29 + 64411610 CCACAGATGTCTA-CAGAGAAGAATCTTCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320629 29 - 8369475 CCACAGGTGTCTA-CAGAGAAGAATCTTCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913857 29 - 106955855 CCACAGATGTCTA-CAGAGAACAATCTTCC i nomLeu3.chr10 C 0 I 2 s rheMac8.chr19 30227520 28 + 53671032 CCATAGGTATCTA-CAAAGAAG-ATCTTCC i rheMac8.chr19 C 0 I 5 s macFas5.chr19 34679454 28 + 59248254 CCATAGGTATCTA-CAAAGAAG-ATCTTCC i macFas5.chr19 C 0 I 5 s macNem1.NW_012011689v1 4546125 28 - 13342542 CCATAGGTATCTA-CAAAGAAG-ATCTTCC i macNem1.NW_012011689v1 C 0 I 5 s cerAty1.NW_012005268v1 5476182 29 + 7714307 CCATAGGTATCTA-CAGAGAAGAATCTTCC i cerAty1.NW_012005268v1 C 0 I 5 s chlSab2.chr6 29282899 29 + 50890351 CCACAGGTATCTA-CAAAGAAGAATTTTCC i chlSab2.chr6 C 0 I 618 s manLeu1.NW_012102454v1 911342 29 - 2385121 CCATAGGTATCTA-CAGAGAAGAATCTTCC i manLeu1.NW_012102454v1 C 0 I 4 s colAng1.NW_012111697v1 2347664 29 + 4274983 CCACAGGTATCTA-CAGAGAAGAATCTTCC i colAng1.NW_012111697v1 C 0 I 4 s calJac3.chr22 28579840 29 + 49145316 CCACAGATATCTA-CAGAGAAGAATATTCC i calJac3.chr22 C 0 I 3 s saiBol1.JH378197 5423707 29 + 8899380 CCACAGATATCTA-CAGAGAAGAATATTCC i saiBol1.JH378197 C 0 I 3 s cebCap1.NW_016107633v1 1633089 29 - 2680843 CCACAGATATCTA-CAGAGAAGAATATTCC i cebCap1.NW_016107633v1 C 0 I 3 s aotNan1.NW_018505377v1 380831 29 - 4471408 ACACAGATATCTA-CAGAGAAGACTATTCC i aotNan1.NW_018505377v1 C 0 I 3 s micMur3.chr22 3975950 29 - 30143674 CCACAGATATCTA-CAGAGAGGAATCCTCC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 590323 29 + 2501019 CCACAGGTATCTA-CACAGAGGAATCCTCC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5490629 25 + 5549422 ctacaggtgcccaccacaca-----cctgc i otoGar3.GL873654 I 138 C 0 s canFam3.chr1 4630582 19 - 122678785 ----------CTG-CAGAGGAGAATCGTCC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 363907 26 + 643850 ---CAGATGTCTG-CAGAGAAGACTCCCCC i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111102954 10741 - 145441459 I a score=38804.000000 s hg38.chr19_GL383574v1_alt 88347 3 + 155864 ttt s panTro5.chr19 36156909 3 + 61309027 ttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39903131 2 + 64411610 -TT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320658 3 - 8369475 TTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913888 3 - 106955855 TTT i nomLeu3.chr10 I 2 C 0 s rheMac8.chr19 30227553 3 + 53671032 TTT i rheMac8.chr19 I 5 C 0 s macFas5.chr19 34679487 3 + 59248254 TTT i macFas5.chr19 I 5 C 0 s macNem1.NW_012011689v1 4546158 3 - 13342542 TTT i macNem1.NW_012011689v1 I 5 C 0 s cerAty1.NW_012005268v1 5476216 3 + 7714307 ttc i cerAty1.NW_012005268v1 I 5 C 0 s manLeu1.NW_012102454v1 911375 3 - 2385121 TTT i manLeu1.NW_012102454v1 I 4 C 0 s colAng1.NW_012111697v1 2347697 3 + 4274983 ttt i colAng1.NW_012111697v1 I 4 C 0 s calJac3.chr22 28579872 3 + 49145316 ttt i calJac3.chr22 I 3 C 0 s saiBol1.JH378197 5423739 3 + 8899380 TTT i saiBol1.JH378197 I 3 C 0 s cebCap1.NW_016107633v1 1633121 3 - 2680843 TTT i cebCap1.NW_016107633v1 I 3 C 0 s aotNan1.NW_018505377v1 380863 3 - 4471408 TTT i aotNan1.NW_018505377v1 I 3 C 0 s micMur3.chr22 3975979 3 - 30143674 TTT i micMur3.chr22 C 0 I 1047 s proCoq1.NW_012149263v1 590352 3 + 2501019 TTT i proCoq1.NW_012149263v1 C 0 I 703 s otoGar3.GL873654 5490654 3 + 5549422 cta i otoGar3.GL873654 C 0 I 1 s canFam3.chr1 4630601 3 - 122678785 TCT i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 363933 3 + 643850 TTT i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29282928 618 + 50890351 I a score=65833.000000 s hg38.chr19_GL383574v1_alt 88350 9 + 155864 tttttcttt s panTro5.chr19 36156912 9 + 61309027 tttttcttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39903133 9 + 64411610 TTTTTCTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320661 9 - 8369475 TCTTTCTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913891 9 - 106955855 TTTTTCTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30227556 9 + 53671032 TCCCTCTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34679490 9 + 59248254 TCCCTCTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4546161 9 - 13342542 TCCCTCTCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5476219 9 + 7714307 ttcctcttt i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 911378 9 - 2385121 TTCCTCTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2347700 9 + 4274983 ttcctcttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579875 9 + 49145316 ttttccttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423742 6 + 8899380 TT---CTGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1633124 9 - 2680843 TTTTCCTGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 380866 9 - 4471408 TTTTTCTTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5490658 9 + 5549422 tttttcttt i otoGar3.GL873654 I 1 C 0 s canFam3.chr1 4630606 9 - 122678785 TTTGTTTGT i canFam3.chr1 I 2 C 0 s dasNov3.JH563638 363936 9 + 643850 TATTTCTTT i dasNov3.JH563638 C 0 I 281 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29282928 618 + 50890351 I a score=167089.000000 s hg38.chr19_GL383574v1_alt 88359 28 + 155864 taatc-ctga----------------tatttatttatttatttat s panTro5.chr19 36156921 40 + 61309027 taatc-ctga----tatttatttatttatttatttatttatttat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39903142 40 + 64411610 TAATC-CTGA----tatttatttatttatttatttatttatttat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320670 40 - 8369475 TAATC-CTGA----tatttatttatttatttatttatttatttat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913900 24 - 106955855 TAATC-CTGA--------------------TAtttatttatttat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30227565 45 + 53671032 TAATCACTGAtatttatttatttatttatttatttatttatttat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34679499 45 + 59248254 TAATCACTGAtatttatttatttatttatttatttatttatttat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4546170 33 - 13342542 TAATCACTGA------------tatttatttatttatttatttat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5476228 29 + 7714307 taatcactga----------------tatttatttatttatttat i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 911387 25 - 2385121 TAATCACTGA--------------------TATTTAtttatttat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2347709 29 + 4274983 taatcactga----------------tatttatttatttatttat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579884 25 + 49145316 taatcactga--------------------tatttatttatttat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423748 39 + 8899380 GAATCACTGA------TAtatatatttatttatttatttatttat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1633133 25 - 2680843 TAATCATTGA--------------------TAtttatttttttat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 380875 21 - 4471408 TAATCACTGA------------------------TAtttatttat i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5490667 27 + 5549422 ttctttttaa------------------tttttctatttatttat i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4630615 28 - 122678785 TTTTC-CTAG----------------CAATTTGTTGCCTAATTAT i canFam3.chr1 C 0 I 582 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29282928 618 + 50890351 I a score=1251365.000000 s hg38.chr19_GL383574v1_alt 88387 156 + 155864 ttatttttgagacttgagtctcgctctaacatccaggctggagtgcagtggtgcgatctcagctcactgcaacctctgcct-ccgggttcaagcaattctcctgcctcagcctcctgagtagct-gagattacaggcacgcaccaccacacccagtta s panTro5.chr19 36156961 156 + 61309027 ttatttttgagacttgagtctcgctctaacatccaggctggagtgcagtggtgcgatctcagctcactgcaacctctgcct-ctgggttcaagcaattctcctgcctcagcctcctgagtagct-gagattacaggcatgcgccaccacacccagtta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39903182 156 + 64411610 ttatttttgagacttgagtctcgctctaacatccaggctggagtgcagtggtgcgatctcagctcactgcaacctctgcct-ctgggttcaagcaattctcctgcctcagcctcctgagtagct-gagattacaggcatgcgccaccacacccagtta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320710 156 - 8369475 ttatttttgagacttgagtctcactctgtcatccaggctggagtgcagtggtgcgatctcagctcactgcaacctctgcct-ccgggttcaagcaattctcctgcctcagcctcctgaatagct-gagattacaggcacgggccaccacacccagtta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63913924 156 - 106955855 ttattttttagac-tgagtctcgctctatcatccaggctggagtgcagtggtgcgatctcagctcactgcaacctctgcct-ctgggttcaagcagttctcctgcctcagcctcctgagtagctggagattacaggcacaggccaccacacccagtta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30227610 145 + 53671032 ttatttttgagac-tgagtctcgctttatcatccaggctggagtgcagtggcatgatttcggctcactgcaacctctgcct-ctgggttcaagcaattatcctgcctcaacctcccaaa------g-----acagatatctgccaccacacccagcta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34679544 145 + 59248254 ttatttttgagac-tgagtctcgctttatcatccaggctggagtgcagtggcatgatttcggctcactgcaacctctgcct-ctgggttcaagcaattatcctgcctcaacctcccaaa------g-----acagatatctgccaccacacccagcta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4546203 145 - 13342542 ttatttttgagac-tgagtctcgctttatcatccaggctggagtgcagtggcatgatttcggctcactgcaacctctgcct-ctgggttcaagcaattatcctgcctcaacctcccaaa------g-----acagatatctgccaccacacccagcta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5476257 145 + 7714307 ttatttttgagac-tgagtctcgctttatcatccaggctggagtgcagtggcatgatttcggctcactgcaacctctgcct-ctgggttcaagcaattatcctgcctcaacctcccaaa------g-----acagatatctgccaccacacccagcta i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 911412 145 - 2385121 ttatttttgagac-tgagtctcgctttatcatccaggctggagtgcagtggcatgattttggctcactgcaacctctgcct-ctgggttcaagcaattatcctgcctcaacctcccaag------g-----acagatatctgccaccacacccagcta i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2347738 145 + 4274983 ttatttttgagac-tgagtctcactttatcatccaggctgcagtgcagtggtgtgattttggctcactgcaacctctgcct-ctgggttcaagcaattatcctgcctcaacctcccaaa------g-----acaggtatctgccaccacacccagcta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28579909 156 + 49145316 ttatttttgaggc-tgagtctcactctatcatccaggctggagtacagtggcacaatctcagctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagat-gagattacaggcacctaccaccacacctggcta i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423787 151 + 8899380 ttatttttgagac-tgagtctcactctatc-----ggctggagtgcagtggcacgatctcggctcactgcaacctctgcctcccgggttcaagcaattcgcctgcctcagcctcccaagtagct-gagattataggcacttaccaccacacctggcta i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1633158 156 - 2680843 ttatttttgagac-tgagtctcactctatcatgtaggctggagtgcagtggcacaatctcggctcactgcaacctctgcctcctgggttcaagcaattttcctgcctcagccccccaagtagct-gagattacaggcacctaccactacacctggcta i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 380896 156 - 4471408 ttatttttgagac-tgagtctcactctatcgtctaggctggagtgcagtggtacaatctctgctcactgcaacctctgtgtcccgggttcaagcaattctcctgcctcagcctcccaagtagct-gagactgcaggcacctaccaccacatctggcta i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5490694 150 + 5549422 tta---ttgagac-agagcctcaagctatccccttgggtagagtgacatggtt---tcacagctcacagcaacctccaactcctgggctcaagcgagtctcctgcctcagcctcccaagtagct-gggaccacaggcgcccgccacaacgcccggcta i otoGar3.GL873654 C 0 I 113 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29282928 618 + 50890351 I e canFam3.chr1 4630643 582 - 122678785 I a score=440447.000000 s hg38.chr19_GL383574v1_alt 88543 52 + 155864 atttatccatttatagtagagacagggtttcaccatgttggccaggatggtc s panTro5.chr19 36157117 52 + 61309027 gtttatccatttatagtagagacagggtttcaccatgttggccaggatggtc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39903338 52 + 64411610 gtttatccatttatagtagagacagggtttcaccatgttggccaggatggtc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320866 52 - 8369475 atttatccatttatagtagagacagggtttcaccatgttggccaggatggtc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914080 52 - 106955855 atttatccatttatagtagagacagggtttcaccatgttggccaggatggtc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30227755 48 + 53671032 att----tatttatagtagagacagggtttcaccatgttggccaggctggtc i rheMac8.chr19 C 0 I 83 s macFas5.chr19 34679689 47 + 59248254 att----tatttatagtagagacagggtttcaccatgttggccaggctggt- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4546348 48 - 13342542 att----tatttatagtagagacagggtttcaccatgttggccaggctggtc i macNem1.NW_012011689v1 C 0 M 1681 s cerAty1.NW_012005268v1 5476402 48 + 7714307 att----tatttatagtagagacagggtttcaccatgttggccaggctggtc i cerAty1.NW_012005268v1 C 0 I 74 s manLeu1.NW_012102454v1 911557 48 - 2385121 att----tatttatagtagagacagggtttcaccatgttggccaggctggtc i manLeu1.NW_012102454v1 C 0 I 74 s colAng1.NW_012111697v1 2347883 52 + 4274983 attcatctatttatagtagagacagggtttcaccatgttggccaggctggtc i colAng1.NW_012111697v1 C 0 I 74 s calJac3.chr22 28580065 52 + 49145316 atttttgtattttcagtagagatggggtttcaccatgttggccaggctggtc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423938 52 + 8899380 atttttgtatttttagtagagatggggtttcatcatgttgaccaggctggtc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1633314 52 - 2680843 atttttgtatttttagtagagatggggtttcaccatgttagccagactggtc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 381052 52 - 4471408 atttttgtatttttagtagagatagggtttcaccatgttggccaggctggtc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5490957 50 + 5549422 atttttctattcttagtagagacagggtctcac--tcttgctcaggctggtc i otoGar3.GL873654 I 113 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29282928 618 + 50890351 I e canFam3.chr1 4630643 582 - 122678785 I a score=43112.000000 s hg38.chr19_GL383574v1_alt 88595 13 + 155864 tcaaactcctgac s panTro5.chr19 36157169 13 + 61309027 tcaaactcctgac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39903390 13 + 64411610 tcaaactcctgac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320918 13 - 8369475 tcaaactcctgac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914132 13 - 106955855 tcaaactcctgac i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28580117 13 + 49145316 ttgaacacctgac i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5423990 13 + 8899380 ttgaactcctgac i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1633366 13 - 2680843 ttgaactcctaac i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 381104 13 - 4471408 ttgaactcctgac i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5491007 13 + 5549422 ttgagctcctgag i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29282928 618 + 50890351 I e canFam3.chr1 4630643 582 - 122678785 I e colAng1.NW_012111697v1 2347935 74 + 4274983 I e manLeu1.NW_012102454v1 911605 74 - 2385121 I e cerAty1.NW_012005268v1 5476450 74 + 7714307 I e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e macFas5.chr19 34679736 0 + 59248254 C e rheMac8.chr19 30227803 83 + 53671032 I a score=6111.000000 s hg38.chr19_GL383574v1_alt 88608 3 + 155864 ctc s panTro5.chr19 36157182 3 + 61309027 ctc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39903403 3 + 64411610 ctc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320931 3 - 8369475 ctc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914145 3 - 106955855 ctc i nomLeu3.chr10 C 0 C 0 s aotNan1.NW_018505377v1 381117 3 - 4471408 ctc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5491020 3 + 5549422 ctc i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29282928 618 + 50890351 I e canFam3.chr1 4630643 582 - 122678785 I e cebCap1.NW_016107633v1 1633379 0 - 2680843 C e saiBol1.JH378197 5424003 0 + 8899380 C e calJac3.chr22 28580130 0 + 49145316 C e colAng1.NW_012111697v1 2347935 74 + 4274983 I e manLeu1.NW_012102454v1 911605 74 - 2385121 I e cerAty1.NW_012005268v1 5476450 74 + 7714307 I e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e macFas5.chr19 34679736 0 + 59248254 C e rheMac8.chr19 30227803 83 + 53671032 I a score=37034.000000 s hg38.chr19_GL383574v1_alt 88611 36 + 155864 aagtgatccacctgcctcagcctcccaaagtgtggg s panTro5.chr19 36157185 36 + 61309027 aagtgatccacctgcctcagcctcccaaagtgtggg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39903406 36 + 64411610 aagtgatccacctgcctcagcctcccaaagtgtggg i panPan2.chr19 C 0 I 937 s gorGor5.CYUI01015150v1 6320934 36 - 8369475 aagtgatccacctgcctcagcctcccaaagtgtggg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914148 36 - 106955855 aagtgatccacccgcctgagcctcccaaagtgttgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34679736 11 + 59248254 -------------------------caacatgctgg i macFas5.chr19 C 0 C 0 s otoGar3.GL873654 5491023 36 + 5549422 aagcaattcaggcacctcagcctccaggagtgctgt i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29282928 618 + 50890351 I e canFam3.chr1 4630643 582 - 122678785 I e aotNan1.NW_018505377v1 381120 0 - 4471408 C e cebCap1.NW_016107633v1 1633379 0 - 2680843 C e saiBol1.JH378197 5424003 0 + 8899380 C e calJac3.chr22 28580130 0 + 49145316 C e colAng1.NW_012111697v1 2347935 74 + 4274983 I e manLeu1.NW_012102454v1 911605 74 - 2385121 I e cerAty1.NW_012005268v1 5476450 74 + 7714307 I e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e rheMac8.chr19 30227803 83 + 53671032 I a score=29972.000000 s hg38.chr19_GL383574v1_alt 88647 26 + 155864 gattacaggcataagccaccacacct s panTro5.chr19 36157221 26 + 61309027 gattacaggcataagccaccacacct i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320970 26 - 8369475 gattacaggcataagccaccacacct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914184 26 - 106955855 gattacaggcatgagccaccacacct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34679747 26 + 59248254 gattacaggcgtgagccaccacactt i macFas5.chr19 C 0 C 0 s otoGar3.GL873654 5491059 26 + 5549422 ggtgacaggcgtgagtcgcctcaccc i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29282928 618 + 50890351 I e canFam3.chr1 4630643 582 - 122678785 I e aotNan1.NW_018505377v1 381120 0 - 4471408 C e cebCap1.NW_016107633v1 1633379 0 - 2680843 C e saiBol1.JH378197 5424003 0 + 8899380 C e calJac3.chr22 28580130 0 + 49145316 C e colAng1.NW_012111697v1 2347935 74 + 4274983 I e manLeu1.NW_012102454v1 911605 74 - 2385121 I e cerAty1.NW_012005268v1 5476450 74 + 7714307 I e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e rheMac8.chr19 30227803 83 + 53671032 I e panPan2.chr19 39903442 937 + 64411610 I a score=6210.000000 s hg38.chr19_GL383574v1_alt 88673 28 + 155864 ggcc------TAtttttatt-------------------------ttttttttttttga s panTro5.chr19 36157247 34 + 61309027 ggcctatttttatttttatt-------------------------tttattttttttga i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6320996 28 - 8369475 ggcc------TAtttttatt-------------------------ttttatttttttga i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34679773 53 + 59248254 ggcc------TATttttatttattttattttattttattttattattttttttttttga i macFas5.chr19 C 0 C 0 s otoGar3.GL873654 5491085 27 + 5549422 agcT------TCTTCCAGTG-------------------------TTCTTGATTCCAG- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29282928 618 + 50890351 I e canFam3.chr1 4630643 582 - 122678785 I e aotNan1.NW_018505377v1 381120 0 - 4471408 C e cebCap1.NW_016107633v1 1633379 0 - 2680843 C e saiBol1.JH378197 5424003 0 + 8899380 C e calJac3.chr22 28580130 0 + 49145316 C e colAng1.NW_012111697v1 2347935 74 + 4274983 I e manLeu1.NW_012102454v1 911605 74 - 2385121 I e cerAty1.NW_012005268v1 5476450 74 + 7714307 I e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e rheMac8.chr19 30227803 83 + 53671032 I e nomLeu3.chr10 63914210 0 - 106955855 C e panPan2.chr19 39903442 937 + 64411610 I a score=5169.000000 s hg38.chr19_GL383574v1_alt 88701 19 + 155864 gatggagtcttgcactttc s panTro5.chr19 36157281 19 + 61309027 gatggagtctcgcactttc i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321024 18 - 8369475 gatggagtct-gcactttc i gorGor5.CYUI01015150v1 C 0 C 0 s otoGar3.GL873654 5491112 17 + 5549422 TACGTAGCC--GCACTGTC i otoGar3.GL873654 C 0 I 306 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29282928 618 + 50890351 I e canFam3.chr1 4630643 582 - 122678785 I e aotNan1.NW_018505377v1 381120 0 - 4471408 C e cebCap1.NW_016107633v1 1633379 0 - 2680843 C e saiBol1.JH378197 5424003 0 + 8899380 C e calJac3.chr22 28580130 0 + 49145316 C e colAng1.NW_012111697v1 2347935 74 + 4274983 I e manLeu1.NW_012102454v1 911605 74 - 2385121 I e cerAty1.NW_012005268v1 5476450 74 + 7714307 I e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e macFas5.chr19 34679826 0 + 59248254 C e rheMac8.chr19 30227803 83 + 53671032 I e nomLeu3.chr10 63914210 0 - 106955855 C e panPan2.chr19 39903442 937 + 64411610 I a score=38422.000000 s hg38.chr19_GL383574v1_alt 88720 137 + 155864 gcccaggctggagtgtagtggcacgatctcggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacacccggctaatttttgtat s panTro5.chr19 36157300 137 + 61309027 gcccagactggagtgcagtggcacgatctcggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggcgcctgccaccacacccggctaatttttgtat i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321042 137 - 8369475 gcccaggctggagtgcagtggcacgatctcggctcactgcgagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcctgccaccacacccggctaatttttgtat i gorGor5.CYUI01015150v1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5491129 306 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29282928 618 + 50890351 I e canFam3.chr1 4630643 582 - 122678785 I e aotNan1.NW_018505377v1 381120 0 - 4471408 C e cebCap1.NW_016107633v1 1633379 0 - 2680843 C e saiBol1.JH378197 5424003 0 + 8899380 C e calJac3.chr22 28580130 0 + 49145316 C e colAng1.NW_012111697v1 2347935 74 + 4274983 I e manLeu1.NW_012102454v1 911605 74 - 2385121 I e cerAty1.NW_012005268v1 5476450 74 + 7714307 I e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e macFas5.chr19 34679826 0 + 59248254 C e rheMac8.chr19 30227803 83 + 53671032 I e nomLeu3.chr10 63914210 0 - 106955855 C e panPan2.chr19 39903442 937 + 64411610 I a score=35780.000000 s hg38.chr19_GL383574v1_alt 88857 111 + 155864 t----gta---acagggtttcaccatgttagccaaga----------tggtctcgatctcttgacctt--gtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccc s panTro5.chr19 36157437 118 + 61309027 ttttagtagggacagggtttcaccatgttagccagga----------tggtctcgatctcttgacctt--gtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccc i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321179 116 - 8369475 ttttagtagggacagggttttaccatgttagccagga----------tggtctcgatctcttgacctt--gtgatccgcccacctcggcctcccaaagtg-tgggattacaggcgt-agccactgcgcct i gorGor5.CYUI01015150v1 C 0 C 0 s otoGar3.GL873654 5491435 123 + 5549422 -------tgagacagagcctcaagctgtcaccctggatagagtgccgtggcgtctaactcctgggcttaagcgattctcctgcctcagcctcccaaataactgggactacaggtgcccgccacaatgccc i otoGar3.GL873654 I 306 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29282928 618 + 50890351 I e canFam3.chr1 4630643 582 - 122678785 I e aotNan1.NW_018505377v1 381120 0 - 4471408 C e cebCap1.NW_016107633v1 1633379 0 - 2680843 C e saiBol1.JH378197 5424003 0 + 8899380 C e calJac3.chr22 28580130 0 + 49145316 C e colAng1.NW_012111697v1 2347935 74 + 4274983 I e manLeu1.NW_012102454v1 911605 74 - 2385121 I e cerAty1.NW_012005268v1 5476450 74 + 7714307 I e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e macFas5.chr19 34679826 0 + 59248254 C e rheMac8.chr19 30227803 83 + 53671032 I e nomLeu3.chr10 63914210 0 - 106955855 C e panPan2.chr19 39903442 937 + 64411610 I a score=3920.000000 s hg38.chr19_GL383574v1_alt 88968 6 + 155864 ggccTA s panTro5.chr19 36157555 6 + 61309027 ggccTA i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321295 6 - 8369475 ggccTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914210 6 - 106955855 ggccTA i nomLeu3.chr10 C 0 C 0 s otoGar3.GL873654 5491558 5 + 5549422 -aacta i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29282928 618 + 50890351 I e canFam3.chr1 4630643 582 - 122678785 I e aotNan1.NW_018505377v1 381120 0 - 4471408 C e cebCap1.NW_016107633v1 1633379 0 - 2680843 C e saiBol1.JH378197 5424003 0 + 8899380 C e calJac3.chr22 28580130 0 + 49145316 C e colAng1.NW_012111697v1 2347935 74 + 4274983 I e manLeu1.NW_012102454v1 911605 74 - 2385121 I e cerAty1.NW_012005268v1 5476450 74 + 7714307 I e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e macFas5.chr19 34679826 0 + 59248254 C e rheMac8.chr19 30227803 83 + 53671032 I e panPan2.chr19 39903442 937 + 64411610 I a score=5096.000000 s hg38.chr19_GL383574v1_alt 88974 2 + 155864 tt s panTro5.chr19 36157561 2 + 61309027 tt i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321301 2 - 8369475 tt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914216 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s cerAty1.NW_012005268v1 5476524 2 + 7714307 tt i cerAty1.NW_012005268v1 I 74 C 0 s manLeu1.NW_012102454v1 911679 2 - 2385121 tt i manLeu1.NW_012102454v1 I 74 C 0 s colAng1.NW_012111697v1 2348009 2 + 4274983 tt i colAng1.NW_012111697v1 I 74 C 0 s otoGar3.GL873654 5491563 2 + 5549422 tt i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29282928 618 + 50890351 I e canFam3.chr1 4630643 582 - 122678785 I e aotNan1.NW_018505377v1 381120 0 - 4471408 C e cebCap1.NW_016107633v1 1633379 0 - 2680843 C e saiBol1.JH378197 5424003 0 + 8899380 C e calJac3.chr22 28580130 0 + 49145316 C e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e macFas5.chr19 34679826 0 + 59248254 C e rheMac8.chr19 30227803 83 + 53671032 I e panPan2.chr19 39903442 937 + 64411610 I a score=22837.000000 s hg38.chr19_GL383574v1_alt 88976 10 + 155864 tttatttttt s panTro5.chr19 36157563 10 + 61309027 tttatttttt i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321303 10 - 8369475 tttatttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914218 10 - 106955855 tttatttttt i nomLeu3.chr10 C 0 C 0 s cerAty1.NW_012005268v1 5476526 10 + 7714307 tTTATTTTTT i cerAty1.NW_012005268v1 C 0 I 2 s chlSab2.chr6 29283546 8 + 50890351 ttta--tttt i chlSab2.chr6 I 618 I 2 s manLeu1.NW_012102454v1 911681 10 - 2385121 tTTATTTTTT i manLeu1.NW_012102454v1 C 0 I 2 s colAng1.NW_012111697v1 2348011 10 + 4274983 tTTAtttttt i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5491565 10 + 5549422 tttttgttgt i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4630643 582 - 122678785 I e aotNan1.NW_018505377v1 381120 0 - 4471408 C e cebCap1.NW_016107633v1 1633379 0 - 2680843 C e saiBol1.JH378197 5424003 0 + 8899380 C e calJac3.chr22 28580130 0 + 49145316 C e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e macFas5.chr19 34679826 0 + 59248254 C e rheMac8.chr19 30227803 83 + 53671032 I e panPan2.chr19 39903442 937 + 64411610 I a score=347464.000000 s hg38.chr19_GL383574v1_alt 88986 90 + 155864 gagagagagggtctggctgtgtcacccaggctggagtgcagtgacacgatctcggctggctgcaacctctgcctcctgggctcaagccat s panTro5.chr19 36157573 90 + 61309027 gagagagagggtctggctgtgtcacccaggctggagtgcagtgacacgatctcggctggctgcaacctctgcctcctgggctcaagccat i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321313 90 - 8369475 gagagagagtgtctggctgtgtcgcccaggctggagtgcagtgacacgatctcggctggctgcaacctctgcctcctgggctcaagccat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914228 90 - 106955855 gagagagagggtctggctgtgttgcccaggctggagtgcagtgacatgatcttggctcgctgcaacctcctcctcctgggctcaagccat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30227886 90 + 53671032 gagagagagggtctggctgcgtcggccaggctggagtgcagtggcgcaatctcggctcactgcaacctccacctcctgggctcaagccat i rheMac8.chr19 I 83 C 0 s macFas5.chr19 34679826 90 + 59248254 gagagagagggtctggctgtgtcggccaggctggagtgcagtggcgcaatctcggctcactgcaacctccacctcctgggctcaagccat i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5476538 90 + 7714307 GAgagagagggtctggctgtgtcggccaggctggagtgcagtggcgcaatctcggctcactgcaacctccacctcctgggctcaagccat i cerAty1.NW_012005268v1 I 2 C 0 s chlSab2.chr6 29283556 90 + 50890351 gagagagagggtctggctgtgtcgcccaggctggagtgcagtggcgcaatctcggctcactgcaacctccacctcctgggctcaagccat i chlSab2.chr6 I 2 C 0 s manLeu1.NW_012102454v1 911693 90 - 2385121 GAgagagagggtctggctgtgtcggccaggctggagtgcagtggcgcgatctcggctcactgcaacctccacctcctgggctcaagccat i manLeu1.NW_012102454v1 I 2 C 0 s colAng1.NW_012111697v1 2348021 90 + 4274983 gagagagagggtctggctgtgtcgcccaggctggactgcagtggcgcaatcttggctcactgcaacctccacctcctgggctcaggccat i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5491575 85 + 5549422 aatcgtcattgtttggcag----gcctgggctggatt-caaacccaccggctctggtgtatgtgtctggtgccttagttgcttgagctac i otoGar3.GL873654 C 0 I 80 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4630643 582 - 122678785 I e aotNan1.NW_018505377v1 381120 0 - 4471408 C e cebCap1.NW_016107633v1 1633379 0 - 2680843 C e saiBol1.JH378197 5424003 0 + 8899380 C e calJac3.chr22 28580130 0 + 49145316 C e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e panPan2.chr19 39903442 937 + 64411610 I a score=206965.000000 s hg38.chr19_GL383574v1_alt 89076 55 + 155864 cctcccaactcagcctccc-gagtagctgggattacaggcacacaacaccacgccc s panTro5.chr19 36157663 55 + 61309027 cctcccaactcagcctccc-gagtagctgggattacaggcacacaacaccacgccc i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321403 55 - 8369475 ccttccaactcagcctccc-gagtagctgggattacaggcacacaacaccacgccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914318 55 - 106955855 cctcccacctcagcctccc-gagtagctgggattacaggcatacaacaccacgccc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30227976 56 + 53671032 cctcccacctcagcctcctggagtagctgggattacaggcacatcacaccatgccc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34679916 56 + 59248254 cctcccacctcagcctcctggagtagctgggattacaggcacatcacaccatgccc i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5476628 56 + 7714307 cctcccacctcagcctcctggagtagctgggattacaggcacaccacaccatgccc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29283646 56 + 50890351 cctcccacctcagcctcctggagtagccgggattacaggcacacaacaccatgccc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 911783 56 - 2385121 cctcccacctcagcctcctggagtagctgggattacaggcacaccacaccatgccc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2348111 55 + 4274983 cctcccacctcagcctctt-gagtagctgggattacaggcacacaacaccatgccc i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5491660 80 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4630643 582 - 122678785 I e aotNan1.NW_018505377v1 381120 0 - 4471408 C e cebCap1.NW_016107633v1 1633379 0 - 2680843 C e saiBol1.JH378197 5424003 0 + 8899380 C e calJac3.chr22 28580130 0 + 49145316 C e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e panPan2.chr19 39903442 937 + 64411610 I a score=289356.000000 s hg38.chr19_GL383574v1_alt 89131 69 + 155864 aactggttattaaa-ttttttttgt------------agagatggggtcttaccgtgttgcctaggctggtctca---ttctggt s panTro5.chr19 36157718 69 + 61309027 aactggttattaaa-ttttttttgt------------agagatggggtcttaccgtgttgcctaggctggtctca---ttctggt i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321458 70 - 8369475 aactggttattaaatttttttttgt------------agagatggggtctcactgtgttgcctaggctggtctca---ttctggt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914373 69 - 106955855 aactggttattaaa-ttttttttgt------------agagatggggtctcactgtgttgcctaggctggtctca---ttctggt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30228032 69 + 53671032 aactggttattaaa-ttttttttgt------------agagatggggtctcactgtgttgcctaggctggtctca---ttctggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34679972 69 + 59248254 aactggttattaaa-ttttttttgt------------agagatggggtctcactgtgttacctaggctggtctca---ttctggt i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5476684 69 + 7714307 aactggttattaaa-ttttttttgt------------agagatggggtctcactgtgttgcctaggctggtctca---ttctggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29283702 68 + 50890351 aactggttattaaa--tttttctgt------------agagatggggtctcactgtgttgcctagtctggtctca---ttctggt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 911839 70 - 2385121 aactggttattaaatttttttttgt------------agagatggggtctcactgtgttgcctaggctggtctca---ttctggt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2348166 69 + 4274983 aactggttattaca-ttttttttgt------------agagatgaggtctcactgtgttgcctaggctggtctca---ttctggt i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5491740 83 + 5549422 aacagg-tatgggg-ttttctttgttgttgttttttgagaatcgaggtgtcactatgttgcccaggttagactcaaacctctggg i otoGar3.GL873654 I 80 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4630643 582 - 122678785 I e aotNan1.NW_018505377v1 381120 0 - 4471408 C e cebCap1.NW_016107633v1 1633379 0 - 2680843 C e saiBol1.JH378197 5424003 0 + 8899380 C e calJac3.chr22 28580130 0 + 49145316 C e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e panPan2.chr19 39903442 937 + 64411610 I a score=14514.000000 s hg38.chr19_GL383574v1_alt 89200 4 + 155864 ctca s panTro5.chr19 36157787 4 + 61309027 ctca i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321528 4 - 8369475 ctca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914442 4 - 106955855 ctca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30228101 4 + 53671032 ctca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34680041 4 + 59248254 ctca i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5476753 4 + 7714307 ctca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29283770 4 + 50890351 ctca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 911909 4 - 2385121 ctca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2348235 4 + 4274983 ctca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28580130 3 + 49145316 ctc- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5424003 3 + 8899380 ctc- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1633379 3 - 2680843 ctc- i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5491823 4 + 5549422 ctaa i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4630643 582 - 122678785 I e aotNan1.NW_018505377v1 381120 0 - 4471408 C e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e panPan2.chr19 39903442 937 + 64411610 I a score=523867.000000 s hg38.chr19_GL383574v1_alt 89204 61 + 155864 agtgatccacccacctcagcctcccaaagtgctgggattacaggtgtgagccactacgcct s panTro5.chr19 36157791 61 + 61309027 agtgatccacccacctcagcctcccaacgtgctgggattacaggtgtgagccactacgcct i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321532 61 - 8369475 agtgatccacctacctcagcctcccaaagtgctgggattacaggtgtgagccactacgcct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914446 61 - 106955855 agagatccacccacctcagcctcccaaagtgctggaattacaggtgtgagccactacgcct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30228105 61 + 53671032 agtgatccacccacctcagcctcccaaagtgctggaattacaggtatgagccactacacct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34680045 61 + 59248254 agtgatccacccacctcagcctcccaaagtgctgggattacaggtatgagccactacacct i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5476757 61 + 7714307 agtgatccacccacctcagcctcccaaagtgctgggattacaggtatgagccactacacct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29283774 61 + 50890351 agtgatccacccacctcagcctcccaaagtgctgggattacaggtatgagccactacacct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 911913 61 - 2385121 agtgatccacccacctcagcctcctaaagtgctgggattacaggtatgagccactacacct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2348239 61 + 4274983 agtgatccacccacctcagcctcccaaagtgctgggattacaggtgtgagccactacacct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28580133 61 + 49145316 agtaatccacccgcctcggcctcccaaagtgctgggattacaggcatgagccactgtgcct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5424006 61 + 8899380 agtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccactgcgcct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1633382 61 - 2680843 agtgatccacccacctcggcctcccaaagtgctgggattacaggcatgagccactgcgcct i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 381120 61 - 4471408 agtgatccacctgcctcggcctcccaaagtgctagaattacaggcatgagccactgcgcct i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5491827 61 + 5549422 ggtgatcctcccactgcagccttccaagtagctgtgagtacagacacacaccaccacgcct i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 4630643 582 - 122678785 I e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e panPan2.chr19 39903442 937 + 64411610 I a score=32790.000000 s hg38.chr19_GL383574v1_alt 89265 3 + 155864 ggc s panTro5.chr19 36157852 3 + 61309027 ggc i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321593 3 - 8369475 ggc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914507 3 - 106955855 ggc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30228166 3 + 53671032 ggc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34680106 3 + 59248254 ggc i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5476818 3 + 7714307 ggc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29283835 3 + 50890351 ggc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 911974 3 - 2385121 ggc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2348300 3 + 4274983 ggc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28580194 3 + 49145316 ggc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5424067 3 + 8899380 ggc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1633443 3 - 2680843 ggc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 381181 3 - 4471408 ggc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5491888 3 + 5549422 ggc i otoGar3.GL873654 C 0 I 511 s canFam3.chr1 118047886 3 + 122678785 GGA i canFam3.chr1 T 71582 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e panPan2.chr19 39903442 937 + 64411610 I a score=1656125.000000 s hg38.chr19_GL383574v1_alt 89268 210 + 155864 cCTGTGAGGT-ATTTTTCAGCAGCTTTCTAGACTGACAAGAGCAGCTGGA---AGCATGGCAACCCCAGGCAGAGCATAGCGTGCTGCCGCCTCGACTGTGCTCAAGGGGCGCTAGCGTGCGGGAGGAGCCACCTGCCTGGGCCTCTGGAAGGCTTCTGCCTCTGAGCCAGCAGGTACAACAGGGAACAAGAGTGAGAAGGGGACTTGAAAACA s panTro5.chr19 36157855 210 + 61309027 cCTGTGAGGT-ATTTTTCAGCAGCTTTCTAGACTGACAAGAGCAGCTGGA---AGCATGGCAACCCCAGGCAGAGCATAGCGTGCTGCCGCCTCGACTGTGCTCAAGGGGCACTAACGTGCGGGAGGAGCCACCTGCCTGGGCCTCTGGAAGGCTTCTGCCTCTGAGCCAGCAGGTACAACACGGAACAAGAGTGAGAAGGGGACTTGAAAACA i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321596 210 - 8369475 cCTGTGAGGT-ATTTTTCAGCAACTTTCTAGACTGACAGGAGCAGCTGGA---AGCATGGCAACCCCGGGCAGAGCATAGGGTGCTGCCACCTCAACTGTGCTCAAGGGGCACTAGCGTGCGGGAGGAGCCACCTGCTTGGGCCTCTGGAAGGCTTCTGCCTCTGAGCCAGCAGGTACAATACGGAACAAGAGTGAGAAGGGGACTTGAAAACA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914510 210 - 106955855 cCTGTGAGGT-ATTTTTCAGCAACTTTCTAGACTGACAAGAGCAGCTGGA---AGCATGGCAACCCTGGGCAGAGCATAGGGTGCTGCCGCCTGGACTGTGCTCAAGGGGCACTAGTGTGCGGGAGGAGCCACCTGCCTGGGCCTCTGGAAGGCTTCTGCCTCTGAGCCAGCAGGTACAACACAGAACAAGAGTGAGAAGGGGACTTGAAAACA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30228169 210 + 53671032 cCTGTGAGGT-ATTTTTCAGCAACTTTCTAGATTGACAAGAGCAGCTGGA---AGCATGGCAACCTCGGGCAGAGCATAGGGTGCTGCTGCCTGGACCGTGCTCAAAGGGCACTAGTGTGTGGGAGGAGCCACCTGCCTGGGCCTCTGGAAGGCTTCTACCTCTGAGCCAGCAGGTGCAACACGAAACAAGAGTGAGAAGGGGACTTGAAAACA i rheMac8.chr19 C 0 I 318 s macFas5.chr19 34680109 210 + 59248254 cCTGTGAGGT-ATTTTTCAGCAACTTTCTAGATTGACAAGAGCAGCTGGA---AGCATGGCAACCTCGGGCAGAGCATAGGGTGCTGCTGCCTGGACCGTGCTCAAAGGGCACTAGTGTGTGGGAGGAGCCACCTGCCTGGGCCTCTGGAAGGCTTCTACCTCTGAGCCAGCAGGTGCAACACGAAACAAGAGTGAGAAGGGGACTTGAAAACA i macFas5.chr19 C 0 I 319 s cerAty1.NW_012005268v1 5476821 210 + 7714307 cCTGTGAGGT-ATTTTTCAGCAACTTTCTAGATTGACAAGAGCAGCTGGA---AGCATGGCAACCCTGGGCAGAGCATTGGGTGCTGCTGCCTGGACCGCGCTCAAAGGGCACTAGTGTGCGGGAGGAGCCACCTGCCTGGGCCTCTGGAAGGCTTCTACCTCTGAGCCAGCAGGTACAACACGAAACAAGAGTGAGAAGGGGACTTGAAAACA i cerAty1.NW_012005268v1 C 0 I 318 s chlSab2.chr6 29283838 210 + 50890351 cCTGGGAGGT-ATTTTTCAGCAACTTTCTAGATTGACAAGAGCAGCTGGA---AGCATGGCAACCCCGGGCAGAGCATTGGGTGCTGCTGCCTGGACCGTGCTCAAAGGGCACTAGTGTGCAGGAGGAGCCACCTGCCTGGGCCTCTGGAAGGCTTCTGCCTCTGAACCAGCAGGTACAACATGAAACAAGAGTGAGAAGGGGACTTGAAAACA i chlSab2.chr6 C 0 I 322 s manLeu1.NW_012102454v1 911977 210 - 2385121 cCTGTGAGGT-ATTTTTCAGCAACTTTCTAGATTGACAAGAGCAGCTGAA---AGCATGGCAACCCTGGGCAGAGCATTGGGTGCTGCTGCCTGGACCGTGCCCAAAGGGCACTAGTGTGCGGGAGGAGCCACCTGCCTGGGCCTCTGGAAGGCTTCTACCTCTGAGCCAGCAGGTACAACACGAAACAAGAGTGAGAAGGGGACTTGAAAACA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2348303 210 + 4274983 cCTGTGAGGT-ATCTTTCAGCAACTTTCTAGACTGACAAGAGCAGCTGGA---AGCATGGCAACCCCGGGCAGAGCATAGGGTGCTGCTGCCTGGACCGTGCTCAAAGGGCACTAGTGTGCGGGAGGAGCCACCTGCTTGGGCCTCTGGAAGGCTTCTACCTCTGAGCCAGCAGGTACAACACAAAACAAGAGTGAGAAGGGGACTTGAAAATA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28580197 210 + 49145316 cCTGTGAGGT-ATTTTTCAGCAACTTTCTAGACTGACAAGAGCAGCTGGA---AGCATGGCAACCCCAGGCATAGCATAGGGTGCTGCCTCCTGGACCACTCACAAGAGGCACTAATGTGTGGGAGGAGCCACCTGCCTGGGCCTCTAGAAGGCTTCTGCCTGTGAGCCGGCAGGTACAACACGATAGGCAAGTGAGAAGGGGACTTGAAAACA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5424070 210 + 8899380 cCTCTGAGGT-ATTTTTCAGCAACTTTCTAGACTGACAAGAGCAGCTGGA---AGCATGGCATCCCCAGGCAGAGCATAAGGTACTGCCTTGTGGACCACTCCCAAGGGGCACTAATGTGTGGGAGGAGCCACCTGCCTGGGCCTCTGGAGGCCTTCTGCCTGTGAGCCGGCAGGTACAACACGAGACGCAAGTGAGAAGGGGACTTGGAAACA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1633446 209 - 2680843 cCTGTGAGGT-ATTTTTCAGCAACTTTCTAGACTGACAAAAGCAGCTGGA---AGCATGGCAACCCCAGGCAGAGCGTAGGGTGCTGCCTCCTGGACCACTCGCAAGAGGCACTAATGTGTGGGAGGAGCCACCTGCCTGGGCCTCTGGAAGGCTTCTGCCTGTGAGCCGGCA-CTACAACATGAGACGCAAGTGAGAAGGGGACTTGGAAAGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 381184 210 - 4471408 cCTGTGAGGT-ATTTTTCAGCAACCTTCTAGACTGACAAGAGCAGCTGGA---AGCATGGCAACCCCAGGCAGAGCATAAGGTGCTGCCTCCTGGACCACTCGCAAGAGGCACTAATGTGTGGGAGGAGCCACCTGCCTGGGCCTCTGGAAGCCTTCTGCTTGTGAGCCGGCAGGTACAACACGAGATGCAAGTGAGAAGGGGACTTGGAAACA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 118047889 180 + 122678785 TCAGTGAGGCAATTTTTCAACAAATTTCTAGGCTGGTTGGCACACATGGAGTCAGCGTGGGGACCCCGGGCGGAGCAGAGGCTGCAGCCACCTGGACGGTGCCTGAGG-------------------------------GTGCTGCTCAAATGCTTCAGACTCAG---CAGCAGGGATGACAGAGGGCAAAAGTGAGAAGGAGGCTCGAAAACA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5491891 511 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e macNem1.NW_012011689v1 4546396 1681 - 13342542 M e panPan2.chr19 39903442 937 + 64411610 I a score=81452.000000 s hg38.chr19_GL383574v1_alt 89478 8 + 155864 GGAAACCT s panTro5.chr19 36158065 8 + 61309027 GGAAACCT i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321806 8 - 8369475 GGAAACCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914720 8 - 106955855 GGAAATCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30228697 8 + 53671032 GGAAACCT i rheMac8.chr19 I 318 C 0 s macFas5.chr19 34680638 8 + 59248254 GGAAACCT i macFas5.chr19 I 319 C 0 s macNem1.NW_012011689v1 4548130 8 - 13342542 GGAAACCT i macNem1.NW_012011689v1 M 1681 C 0 s cerAty1.NW_012005268v1 5477349 8 + 7714307 GGAAACCT i cerAty1.NW_012005268v1 I 318 C 0 s chlSab2.chr6 29284370 8 + 50890351 GGAAACCT i chlSab2.chr6 I 322 C 0 s manLeu1.NW_012102454v1 912187 8 - 2385121 GGAAACCT i manLeu1.NW_012102454v1 C 0 I 2101 s colAng1.NW_012111697v1 2348513 8 + 4274983 GGAAACCT i colAng1.NW_012111697v1 C 0 I 6298 s calJac3.chr22 28580407 8 + 49145316 GGAAACCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5424280 8 + 8899380 GGAAACCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1633655 8 - 2680843 GGAATCCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 381394 8 - 4471408 GGAAACCT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 118048069 8 + 122678785 GAAAAACT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5491891 511 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e panPan2.chr19 39903442 937 + 64411610 I a score=805540.000000 s hg38.chr19_GL383574v1_alt 89486 105 + 155864 AATTGAAGGTCTGC-------ACAAGTAGTGAACAAACCTGTTTCTCACTGCTGCAGTCGGCATGGCTTATAATTAAGCAGCA---------TACTGTTACAAA-----AAACAAACAAAAGAAAG s panTro5.chr19 36158073 105 + 61309027 AATTGAAGGTCTGC-------ACAAGTAGTGAACAAACCTGTTTCTCACTGCTGCAGTCGGCATGGCTTATAATTAAGCAGCA---------TACTGTTACAAA-----AAACAAACAAAAGAAAG i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321814 105 - 8369475 AATTGAAGGTCTGC-------ACAAGTAGTGAACAAACCTGTTTCTCACTGCTGCAGTCGGCATGGCTTATAATTAAGCAGCA---------TACTGTTacaaa-----aaacaaacaaacaaaAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914728 110 - 106955855 AATTGAAGGTCTGC-------ACAGGTAGTGAACAAACCTGTTTCTCACTGCTGCAGTCGGCATGGCTTATAATTAAGCAGCA---------TACTGTTACAAAAAAACAAACAAATAAAAGGAAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30228705 109 + 53671032 AATTGAAGGTCTGC-------ACAAGTAGTGAACAAACCTGTTTCTCACTGCTGCAGTCAGCATGGCTTATAATTAAGCAGCA---------TACTGTTACAAA-AAACAAACAAATAAAAGGAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34680646 109 + 59248254 AATTGAAGGTCTGC-------ACAAGTAGTGAACAAACCTGTTTCTCACTGCTGCAGTCAGCATGGCTTATAATTAAGCAGCA---------TACTGTTACAAA-AAACAAACAAATAAAAGGAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4548138 109 - 13342542 AATTGAAGGTCTGC-------ACAAGTAGTGAACAAACCTGTTTCTCACTGCTGCAGTCAGCATGGCTTATAATTAAGCAGCA---------TACTGTTACAAA-AAACAAACAAATAAAAGGAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5477357 109 + 7714307 AATTGAAGGTCTGC-------ACAAGTAGTGAACAAACCTGTTTCTCACTGCTGCAGTCAGCATGGCTTATAATTAAGCAGCA---------TACTGTTATAAA-AAACAAACAAATAAAAGGAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29284378 109 + 50890351 AATTGAAGGTCTGC-------ACAAGTAGTGAACAAACCTGTTTCTCACTGCTGCAGTCAGCATGGCTTATAATTAAGCAGCA---------TACTGTTACAAA-AAACAAACAAATAAAAGGAAG i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2354819 109 + 4274983 AATTGAAGGTCTGC-------ACAAGTAGTGAACAAACCTGTTTCTCACTGCTACAGTCAGCATGGCTTATAATTAAGCAGCA---------TACTGTTACAAA-AAACAAACAAATAAAAGGAAG i colAng1.NW_012111697v1 I 6298 C 0 s calJac3.chr22 28580415 103 + 49145316 AATTGAAGGTATGC-------ACAAGTA--GAACAAACTTGTTTCTCACTACTGCAGTCAGCATGGGTTATAATTAAGCAGCA---------TACTGTTTCAAA-----ACACAAACAAAAGGAAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5424288 103 + 8899380 AATTGAAGGTATGC-------ACAAATA--GAACAAACCTGTTTCTCACTACTGCAGTCAGCATGGGTTATAATTAAGCAGCA---------TACTGTTTTGAA-----AAGCAAGCAAAAGGAAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1633663 102 - 2680843 AATTGAAGGTATGC-------AC-AGTA--GAACAAACCTGTTTCTCACTACTGCAGTCAGCATGGGTTATAATTCAGCAGCA---------AACCGTTTCGAA-----AAACAAGCAAAAGGAAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 381402 112 - 4471408 AATTGAAGGTATGC-------ACAAGTA--GAACAAACCTGTTTTTCACTACTGCAGTCAGCATGGGTTATAATTAAGCAGCATACTGTTTCTACTGTTTCGAA-----AAACAAACAAAAGGAAG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 118048077 108 + 122678785 AATTTTAGGTCTGTCCGCACGATAAGCAGTGGATAATCC----TCTCACTGCCGCGGTTAGAATGACCTATAATTAGGCAACA---------AATTGCTAGGAA-AAACAAACAAACAAGAG---- i canFam3.chr1 C 0 T 8237 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5491891 511 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e panPan2.chr19 39903442 937 + 64411610 I a score=943124.000000 s hg38.chr19_GL383574v1_alt 89591 124 + 155864 AGTCTTggctgggcgcaggtggtttatgcctgtaatcctagcactttgggaggttgaggcgggtggatcacttgaggccaaagagtttgggaccagcctgggcaacacagggagaccccatctc s panTro5.chr19 36158178 124 + 61309027 AGTCTTggctgggcgcaggtggtttatgtctgtaatcctagcactttgggaggttgaggcgggtggatcacttgaggccaaagagtttgggaccagcctgggcaacacagggagaccccatctc i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6321919 124 - 8369475 AGTCTTggctgggcgcaggtggtttatgcctgtaatcctagcactttgggaggttgaggcgggtggatcacttgaggccaaagagtttgggaccagcctgggcaacacagggagaccccatctc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914838 123 - 106955855 AGTCTTggctgggtgcaggtggtttatgcctgtaatcctagcactttgggaggttgaggtggg-ggatcacttgaggccaaagagtttgggaccagcctgggcaacacagggagactccacctc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30228814 124 + 53671032 AGTCTTggctgggcacaggtggtttatgcctgtaatcctagcactttgggaggttgaggcgggtggatcacttgaggccaaagagtttgggagcagcctgggcaacacagggagaccccatctc i rheMac8.chr19 C 0 I 8 s macFas5.chr19 34680755 124 + 59248254 AGTCTTggctgggcgcaggtggtttatgcctgtaatcctagcactttgggaggttgaggcgggtggatcacttgaggccaaagagtttgggagcagcctgggcaacacagggagaccccatctc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4548247 124 - 13342542 AGTCTTggctgggcgcaggtggtttatgcctgtaatcctagcactttgggaggttgaggcgggtggatcacttgaggccaaagagtttgggagcagcctgggcaacacagggagaccccatctc i macNem1.NW_012011689v1 C 0 I 16 s cerAty1.NW_012005268v1 5477466 124 + 7714307 AGTCTTggctaggcgcgggtggtttatgcctgtaatcctagcactttgggaggttgaggcgggtggatcacttgaggccaaagagtttgggaccagcctgggcaacacagggagaccccatctc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29284487 124 + 50890351 AGTCTTggctgggcgcaggtggtttatgcctgtaatcctagcactttgggaggttgaggcaggtggatcacttgaggccaaagagtttgggaccagcctgggcaacacagggagaccccatctc i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2354928 124 + 4274983 AGTCTTggctgggcgcaggtggtttatgcctgtaatcctagcactttgggaggttgaggcgggtggatcacttgaggccaaagagtttgggaccaacctgggcaacacagggagaccccatctc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28580518 123 + 49145316 AGTCTTggccgggtgcaggtggctaatgcctgtaatcctagcaccttgggaagttgaagcaggtggatcacttgaagcc-aagagattgagaccaacctgggcaacacagggagaccccatctc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5424391 118 + 8899380 AGTCTTggccaggtgcaggtggctaatgcctgtaatcctagcaccttgggaagtcgaggcaggtggatcacttgaggac-aagagattgagaccaacctggg-----cagggagaccccatctc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1633765 123 - 2680843 AGTCGTggccgggtgcaggtggctaatgcctgtaatcctagcaccttgggaagtcgaggcaggtggatcacttgaggac-aagagattgaggccaacctgggcaacacagggagaccccatctc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 381514 123 - 4471408 AGTCTTggctgggtgcaggtggcttattcctgtaatcctagcaccttgggaagttgaggcaggtggatcacctgaggac-aagagattgagaccaacctgggcaacacagggagaccccatctc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5491891 511 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e panPan2.chr19 39903442 937 + 64411610 I a score=13552.000000 s hg38.chr19_GL383574v1_alt 89715 27 + 155864 tacaaaaaaaaaaaaaaaaaaaaaaaa s panTro5.chr19 36158302 25 + 61309027 tacaaaaaaaaaaaaaaaaaaaaaa-- i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322043 17 - 8369475 tacaaaaaaaaaaaaaa---------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914961 13 - 106955855 tacaaaaaaaaaa-------------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34680879 13 + 59248254 --------aatcaatcaatca------ i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5477590 21 + 7714307 ----aataaataaataaataaacaa-- i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29284611 25 + 50890351 aataaataaataaataaataaataa-- i chlSab2.chr6 C 0 I 2 s colAng1.NW_012111697v1 2355052 25 + 4274983 tataaataaataaataaacaaacaa-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28580641 17 + 49145316 tacaaagaaaactcaaa---------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5424509 17 + 8899380 tacaaagaaaactaaaa---------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1633888 17 - 2680843 tacaaataaaactaaaa---------- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 381637 17 - 4471408 tacaaagaaaaccagaa---------- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5491891 511 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548371 16 - 13342542 I e rheMac8.chr19 30228938 8 + 53671032 I e panPan2.chr19 39903442 937 + 64411610 I a score=214.000000 s hg38.chr19_GL383574v1_alt 89742 8 + 155864 caaaacaa s otoGar3.GL873654 5492402 8 + 5549422 ccagccaa i otoGar3.GL873654 I 511 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e chlSab2.chr6 29284636 2 + 50890351 I e canFam3.chr1 118048185 8237 + 122678785 T e aotNan1.NW_018505377v1 381654 0 - 4471408 C e cebCap1.NW_016107633v1 1633905 0 - 2680843 C e saiBol1.JH378197 5424526 0 + 8899380 C e calJac3.chr22 28580658 0 + 49145316 C e colAng1.NW_012111697v1 2355077 0 + 4274983 C e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e cerAty1.NW_012005268v1 5477611 1 + 7714307 I e macNem1.NW_012011689v1 4548371 16 - 13342542 I e macFas5.chr19 34680892 0 + 59248254 C e rheMac8.chr19 30228938 8 + 53671032 I e nomLeu3.chr10 63914974 0 - 106955855 C e gorGor5.CYUI01015150v1 6322060 0 - 8369475 C e panPan2.chr19 39903442 937 + 64411610 I e panTro5.chr19 36158327 0 + 61309027 C a score=1137563.000000 s hg38.chr19_GL383574v1_alt 89750 179 + 155864 aacaaaacaaaaaaaacactaaaatattagccagccatggtggcatatgcctgtggtcccagcta-ctca-ggaggctgaggaaggaggactgcttgtgcaca-gaaggtcaaggctgcagtgagctgtgatcataccattgcactatagcctgggcaacacagtgagaccctatctcaaaa s panTro5.chr19 36158327 163 + 61309027 -----------------acctaaatatt-gccagccatggtggcatatgcctgtggtcccagcta-ctcacagaggctgaggaaggaggattgcttgtgcagacaaaggtcgaggctgcagtgagctgtgatcataccattgcactatagcctgggcaacacagtgagaccctatctcaaaa i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322060 162 - 8369475 -----------------actaaaatattagccagccatggtggcatatgcctgtggtcccagcta-ctca-ggaggctgaggaaggaggattgcttgtgcaca-gaaggtcgaggctgcagtgagctgtgatcataccattgcactatagcctgggcaacacagtgagaccctatctcaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63914974 160 - 106955855 -----------------actaaaaaattagccagccatggtggcatatacctgtggtcccagcta-ccca-ggaggctgaggaaggaggattgcttgcgcaca---gggttgaggctgcagtgagctgtgatcataccattgcactataggctgggcaacacagtgagaccctgtctcaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30228946 180 + 53671032 aatcaatcaataaacaaactaaaaaatcagccagccatggtggtgtgtgcctgtggtcccagctacctca-ggagactgaggaaggaggattgcttgtgcaca-ggaggtcgaggctacagtgagctgtgatcataccattgcactatagcctgggcaaaacagtgagaccctgtctcaaaa i rheMac8.chr19 I 8 C 0 s macFas5.chr19 34680892 180 + 59248254 atcaaatcaataaacaaactaaaaaatcagccagccatggtggtgtgtgcctgtggtcccagctacctca-ggagactgaggaaggaggattgcttgtgcaca-ggaggtcgaggctacagtgagctgtgatcataccattgcactatagcctgggcaaaacagtgagaccctgtctcaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4548387 180 - 13342542 aatcaatcaataaacaaactaaaaaatcagccagccatggtggtgtgtgcctgtggtcccagctacctca-ggagactgaggaaggaggattgcttgtgcaca-ggaggtcgaggctacagtgagctgtgatcataccattgcactatagcctgggcaaaacagtgagaccctgtctcaaaa i macNem1.NW_012011689v1 I 16 C 0 s cerAty1.NW_012005268v1 5477612 162 + 7714307 ------------------ctaaaaaatcagccagccatggtggtgtgtgcctgtggtcccagctacctca-ggagaccgaggaaggaggattgcttgtgcaca-ggaggtcgaggctacagtgagctgtgatcataccattgcattatagcctgggcaacacagtgagaccctgtctcaaaa i cerAty1.NW_012005268v1 I 1 C 0 s chlSab2.chr6 29284638 173 + 50890351 -------aaataaataaactaaaaaatcagccagccatggtggtgtgtgcctgtggtcccagctacctca-ggagaccgaggaaggaggattgcttgtgcaca-ggaggtcgaggctacagtgagctgtgatcataccattgcactatagcctgggcaacacagtgagaccctgtctcaaaa i chlSab2.chr6 I 2 C 0 s colAng1.NW_012111697v1 2355077 163 + 4274983 -----------------actaaaaaatcagccagccatggtggtgtgtgcctgtggtcccagctacctca-ggagactgaggaaggaggattgcttgcacaca-ggaggtcgaggctacagtgagctgtgatcataccattgcactatagcctgggcaacacagtgagaccctgtctcaaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28580658 145 + 49145316 -------------------------attagccaggcttgctggcatgtccctgtggttccagcta-ctca-ggaggctgaggaaggaggactgcttgt---------ggttgaggctgcagtgacctgtgatcacgcca-tgcactatagcctgggcaacacagtgagaccctgtctcaaaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5424526 153 + 8899380 -------------------------gttagccaggcatgctggcaggtccctgtggtcccaacta-ctca-ggaggctgaggaagtaggactgcttgtgctca-ggaggttgaggctgcagtgaactgtgatcatgcca-tgcactatagcctggtcaacacagtgagaccctgtctcaaaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1633905 153 - 2680843 -------------------------gttagccaggcatgctggcatgtccctgtggtcccagcta-ctca-ggaggctgaggaaggaggactgcttgtgctca-ggaggctgaggctgcagtgagctgtgatcttgcca-tgcactatagcctggtcaacacagggagaccctgtctcaaaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 381654 153 - 4471408 -------------------------gttagccaggcacgctggcatgtccctgtggtcccagcta-ctca-ggaggctgaggaaggaggactgcttgtgctca-ggagattgaggctgcagtgagctgtgatcatgcca-tgcactatagcctgggcaacacagcgagaccctgtctcaaaa i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5492410 155 + 5549422 ------------actgcaaccaaaaaataaccgggcattgtggtgggcacctgtagtcccagcta-gtgg-ggaggctgagacaaaagaatcacctaagccta-agagctggaggttgccatgagctgtga---cgccatagcactctaccgagggcgacaca---------tctctcaaaa i otoGar3.GL873654 C 0 I 624 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e panPan2.chr19 39903442 937 + 64411610 I a score=143152.000000 s hg38.chr19_GL383574v1_alt 89929 33 + 155864 aaataagtaaaaTTTTAAAAAAAATTAAAAATT s panTro5.chr19 36158490 33 + 61309027 aaataagtaaaatttaaaaaaaaattaaaaatt i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322222 33 - 8369475 aaataagtaaaattaaaaaaaaaaTTaaaaatt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63915134 32 - 106955855 aaataagtaaaattttaaaaaata-taaaaaTT i nomLeu3.chr10 C 0 I 124 s rheMac8.chr19 30229126 27 + 53671032 aaa----taaagttt--aaaaaaattaaaaatt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681072 27 + 59248254 aaa----taaagttt--aaaaaaattaaaaatt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4548567 27 - 13342542 aaa----taaagttt--aaaaaaattaaaaatt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5477774 27 + 7714307 aaa----taaagttt--aaaaaaattaaaaatt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29284811 27 + 50890351 aaa----taaagtta--aaaaaaattaaaaatt i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2355240 27 + 4274983 aaC----TGAAGTTT--Aaaaaaattaaaaatt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28580803 27 + 49145316 ----aaataaaattt--aaaaaaTTTaaaaatt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5424679 31 + 8899380 aaataaataaaaTTT--Taaaaatttaaaaatt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1634058 31 - 2680843 aaataaataaaattt--aaaaaaTTTaaaaatt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 381807 31 - 4471408 aaacaaaTGAAATTT--Taaaaatttaaaaatt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5492565 624 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e panPan2.chr19 39903442 937 + 64411610 I a score=722732.000000 s hg38.chr19_GL383574v1_alt 89962 100 + 155864 Agccgggcgtagtggcgtgtgcctctggctccagctactcag-gaggctgaggcaggagga-tcccttgagcccaggaggttaaggctgcagtgagccatga s panTro5.chr19 36158523 98 + 61309027 atctgcgcgt-gtggcatgtgcc-ctggctccagctactcag-gaggctgaggcaggagga-tcccttgagcccaggaggttaaggctgcggtgagccatga i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322255 100 - 8369475 agccgggcatagtggcgtgtgcctctggctccagccacacag-gaggctgaggcaggagga-tcccttgagcccaggaggttaaggctgcagtgagccatga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63915290 101 - 106955855 agccgggcgtggtggcgggcgcctgtagtcccagctacttggagaggctgaggcaggagaa-tggcgtgaacccgggaggcggagcttgcagtgagccgaga i nomLeu3.chr10 I 124 C 0 s rheMac8.chr19 30229153 100 + 53671032 agccaggcatagtggtgtgtgcctctggctccagctactcag-gaggctgaggcaggagga-tcccttgagcccaggaggttaaggctgaagtgagccatga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681099 100 + 59248254 agccaggcatagtggcgtgtgcctctggctccagctactcag-gaggctgaggcaggagga-tcccttgagcccaggaggttaaggctgaagtgagtcatga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4548594 100 - 13342542 agccaggcatagtggtgtgtgcctctggctccagctactcag-gaggctgaggcaggagga-tcccttgagcccaggaggttaaggctgaagtgagccatga i macNem1.NW_012011689v1 C 0 I 28 s cerAty1.NW_012005268v1 5477801 100 + 7714307 agccaggcatagtggcgtgtgcctctggctccagctactcag-gaggctgaggcaggagga-tcccttgagcccaggaggttaaggctgaagtgagccatga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29284838 100 + 50890351 aggcaggcatagtggcgtgtgcctctggctccagctactcag-gaggcggaggcaggagga-acccttgagcccaggaggttaaggctgaagtgagccatga i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2355267 100 + 4274983 agccaggcatagtggcatgtgcctctggctccagctactcag-gaggctgaggcaggagga-tcccttgagcccaggaggttaaggctggagtgagctatga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28580830 100 + 49145316 agctgggcatagtggtgtgtgcctctggccccagctactcag-gaggctaaggtaggagga-tcccttgagcccaggaggttaaggctgcagtgagacatga i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5424710 100 + 8899380 agctgggcatagtggtgtgtgcctctggccccagctactcag-gaggctgaggtaggagga-tcccttgagcccaggaggttaaggctgcagtaagacatga i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1634089 101 - 2680843 agctgggcacagtggtgtgtacctctggccccagctactcag-gaggctgaggtaggaggactcccttgagcccaggaggttaaggctacagtgagacatga i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 381838 100 - 4471408 agctgggcatagtggtgtgtgcctctggccccagctactcag-gaggctgaggtaggagga-tcccttgagcccaggaggttaaggctgcagtgagacatga i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5492565 624 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e panPan2.chr19 39903442 937 + 64411610 I a score=334925.000000 s hg38.chr19_GL383574v1_alt 90062 59 + 155864 ttgtgtcactgcactccagcctg-------ggcaacagagccagactctgtctc-aaa----------------------------------------aaatatata s panTro5.chr19 36158621 59 + 61309027 ttgtgtcactgcactccagcctg-------ggcaacagagccagactctgtctc-aaa----------------------------------------aaatatata i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322355 59 - 8369475 ttgtgtcactgcactccagcctg-------ggcaacagagccagactctatctc-aaa----------------------------------------aaatatata i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63915391 99 - 106955855 ttgcgccactgcactccagcctg-------ggcggcagagcgagactccgtctc-aaaataaataaataaataaataaataaaaaataataaagaaatatatatata i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229253 66 + 53671032 ttgtgtcactgcactccagcttgggcaacaggcaacagaaccagactctgtctc-aaa----------------------------------------aaatatata i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681199 66 + 59248254 ttgtgtcactgcactccagcttgggcaacaggcaacagaaccagactctgtctc-aaa----------------------------------------aaatatata i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5477901 66 + 7714307 ttgtgtcactgcactccagcttgggcaacaggcaacagaaccagactctgtctc-aaa----------------------------------------aaatatata i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29284938 66 + 50890351 ttgtgtcactgcactccagcttgggcaacaggcaacagaaccagactctgtctc-aaa----------------------------------------aaatatata i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2355367 66 + 4274983 ttgtgtcactgcactccagcctgggcaagaggcaacagaaccagattctgtctc-aaa----------------------------------------aaatatata i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28580930 54 + 49145316 ttgtgccactc-----cagcctg-------ggcaacagagccagattctgtctc-aaa----------------------------------------atatatata i calJac3.chr22 C 0 I 298 s saiBol1.JH378197 5424810 59 + 8899380 ttgtgccactccacttcagcctg-------ggcaacagagccagattctgtctc-aaa----------------------------------------aaaTATATA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1634190 60 - 2680843 ttgtgccactccacttcagcctg-------ggcaacagagccagattctgtctcaaaa----------------------------------------atatatata i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 381938 59 - 4471408 ttgtgccactccactccagcctg-------ggcaacagagccagattctgtctc-aaa----------------------------------------aaatatata i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5492565 624 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=15664.000000 s hg38.chr19_GL383574v1_alt 90121 3 + 155864 aaa s panTro5.chr19 36158680 3 + 61309027 aaa i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322414 3 - 8369475 aaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63915490 3 - 106955855 taa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229319 3 + 53671032 aaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681265 3 + 59248254 aaa i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5477967 3 + 7714307 aaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285004 3 + 50890351 aaa i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2355433 3 + 4274983 aaa i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5424869 3 + 8899380 AAA i saiBol1.JH378197 C 0 I 292 s cebCap1.NW_016107633v1 1634250 3 - 2680843 aaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 381997 3 - 4471408 aaa i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5492565 624 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e calJac3.chr22 28580984 298 + 49145316 I e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=18018.000000 s hg38.chr19_GL383574v1_alt 90124 3 + 155864 ata s panTro5.chr19 36158683 3 + 61309027 ata i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322417 3 - 8369475 ata i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63915493 3 - 106955855 ata i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229322 3 + 53671032 ata i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681268 3 + 59248254 ata i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5477970 3 + 7714307 ata i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285007 3 + 50890351 ata i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2355436 3 + 4274983 aTA i colAng1.NW_012111697v1 C 0 T 4760 s saiBol1.JH378197 5425164 3 + 8899380 ATA i saiBol1.JH378197 I 292 C 0 s cebCap1.NW_016107633v1 1634253 3 - 2680843 ata i cebCap1.NW_016107633v1 C 0 I 317 s aotNan1.NW_018505377v1 382000 3 - 4471408 aTA i aotNan1.NW_018505377v1 C 0 I 292 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5492565 624 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e calJac3.chr22 28580984 298 + 49145316 I e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=3276.000000 s hg38.chr19_GL383574v1_alt 90127 1 + 155864 a s panTro5.chr19 36158686 1 + 61309027 a i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322420 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63915496 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229325 1 + 53671032 a i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681271 1 + 59248254 a i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5477973 1 + 7714307 a i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285010 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s saiBol1.JH378197 5425167 1 + 8899380 A i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5492565 624 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e aotNan1.NW_018505377v1 382003 292 - 4471408 I e cebCap1.NW_016107633v1 1634256 317 - 2680843 I e calJac3.chr22 28580984 298 + 49145316 I e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=3276.000000 s hg38.chr19_GL383574v1_alt 90128 1 + 155864 a s panTro5.chr19 36158687 1 + 61309027 a i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322421 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63915497 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229326 1 + 53671032 a i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681272 1 + 59248254 a i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5477974 1 + 7714307 a i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285011 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s aotNan1.NW_018505377v1 382295 1 - 4471408 A i aotNan1.NW_018505377v1 I 292 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5492565 624 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e cebCap1.NW_016107633v1 1634256 317 - 2680843 I e saiBol1.JH378197 5425168 0 + 8899380 C e calJac3.chr22 28580984 298 + 49145316 I e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=4095.000000 s hg38.chr19_GL383574v1_alt 90129 1 + 155864 a s panTro5.chr19 36158688 1 + 61309027 a i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322422 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63915498 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229327 1 + 53671032 a i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681273 1 + 59248254 a i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5477975 1 + 7714307 a i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285012 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28581282 1 + 49145316 a i calJac3.chr22 I 298 C 0 s aotNan1.NW_018505377v1 382296 1 - 4471408 A i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5492565 624 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e cebCap1.NW_016107633v1 1634256 317 - 2680843 I e saiBol1.JH378197 5425168 0 + 8899380 C e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=626638.000000 s hg38.chr19_GL383574v1_alt 90130 130 + 155864 aaTTATTTTAGAAAG-AAAAATACTTGACAGGC-TTATTCCTGCCCAATTCAATTTATAACT----GTTTATTCATGTGTTGACATCTTAATGCAGTC-TTTTTaaataaaagcaacttcat---taagaaagtaaagga s panTro5.chr19 36158689 130 + 61309027 aaTTATTTTAGAAAG-AAAAATACTTGACAGGC-TTATTCCTGCCCAATTCAATTTATAACT----GTTTATTCATGTGTTGACATCTTAATGCAGTC-TTTTTaaataaaagcaacttcat---taagaaagtaaagga i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322423 125 - 8369475 aaTTTTTT-----AG-AAAAATACTTCACAGGC-TTATTCCTGCCCAATTCTATTTATAACT----GCTTATTCATGTGTTGACATCTTAATGCAGTC-TTTTTaaataaaagcaacttcat---taagaaagtaaagga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63915499 132 - 106955855 aatTATTTTAGAAAG-AAAAATACTTCACAGGC-TTATTCCTGCCCAATTCTATTTATAACT--TAATTTATTCATGTGTTGACATCTTAATGCACTC-TTTTTaaataagagcaacttcat---taagaaagtaaaaga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229328 135 + 53671032 aaTTACTTTAGAAAGAAAAAATACTTCACAGGC-TTATTCCTGCCCAATTCTATTTATAACTGTTGATTTATTCATGTGTTGACATCTTAATGCAGTC-TTTtgaaataaaagcaacttcat---taagaaagtaaagga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681274 135 + 59248254 aaTTACTTTAGAAAGAAAAAATACTTCACAGGC-TTATTCCTGCCCAATTCTATTTATAACTGTTGATTTATTCATGTGTTGACATCTTAATGCAGTC-TTTtgaaataaaagcaacttcat---taagaaagtaaagga i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5477976 135 + 7714307 aaTTACTTTAGAAAGAAAAAATACTTCACAGGC-TTATTCCTGCCCAATTCTATTTATAGCTGTTAATTTATTCATGTGTTGACATCTTAATGCAGTC-TTTtgaaataaaagcaacttcat---taagaaagtaaagga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285013 135 + 50890351 aaTTACTTTAGAAAGAAAAAATACTTCACAGGC-TTATTCCTGCCCAATTCTATTTATAACTGTTAATTTATTCATGTGTTGACATCTTAATGCAGTC-TTTTGGaataaaagcaacttcat---taagaaagtaaagga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28581283 135 + 49145316 aattattttaGAAAG-AAAAATACTTCACAGGGTTTTTTTCTGCCCAATTCTATTTATACTTGTCAATTTATTCATTTGTTGACATTTTAATGCAGTC-TTTTTACAtgaaagcaactttat---taaaaaagtaaaaga i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5425168 132 + 8899380 --TTATTTTAGAAAG-AAAAATACTTCGCAGGG-CTTTTTCTGCCCAATTCTATTTATAACTGTCAATTTATTCATTTGTTGACATTTTAATGCAATC-TTTCTACATGAAAACAACTTTAT---TAAAAAAGTAAAGGA i saiBol1.JH378197 C 0 I 601 s cebCap1.NW_016107633v1 1634573 135 - 2680843 aATTATTTTAGAAAG-AAAAATACTTCACAGGG-TTTTTTCTGCCCAATTCTATTTATAACTGTCAATTTATTCATTTGTTGACATTTTAATGCACTCTTTTTTACAtgaaaacaactttat---taaaaaattaaagga i cebCap1.NW_016107633v1 I 317 C 0 s aotNan1.NW_018505377v1 382297 130 - 4471408 AATTATTTTAGAAAG-AAAAATACTTCACAGGG-TTTTTTCTGCCCAATTC------TAACTGTCAATATATTCATTTGTTGACATTTTAATGCAGC--TTTTTACAtgaaagcaactttatttattaaaaagtaaagga i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5492565 624 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=181477.000000 s hg38.chr19_GL383574v1_alt 90260 37 + 155864 ataaaagaatggctactccataggcaaagcagccttt s panTro5.chr19 36158819 37 + 61309027 ataaaagaatggctactccataggcaaagcagccttt i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322548 37 - 8369475 ataaaagaatggctactccataggcaaagcagcCTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63915631 37 - 106955855 ataaaagaatggctactccataggcagagcagccttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229463 37 + 53671032 ataaaagaatggctactccataggcagagcaaccttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681409 37 + 59248254 ataaaagaatggctactccataggcagagcaaccttt i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5478111 37 + 7714307 ataaaagaatggctactccataggcagagcagccttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285148 37 + 50890351 atgaaagaatggctactccataggcagagcagccttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28581418 37 + 49145316 ataaaagaatggctactccataggcagaacagcCTTT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1634708 37 - 2680843 ataaaagaatcgctactccataggcagagcagccttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 382427 37 - 4471408 ataaaagaatggctactccataagcagagcagccttt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e otoGar3.GL873654 5492565 624 + 5549422 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e saiBol1.JH378197 5425300 601 + 8899380 I e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=41195.000000 s hg38.chr19_GL383574v1_alt 90297 8 + 155864 aaggcAGT s panTro5.chr19 36158856 8 + 61309027 aaggcAGT i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322585 8 - 8369475 AAGCCAGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63915668 8 - 106955855 aaggcAGT i nomLeu3.chr10 C 0 I 439 s rheMac8.chr19 30229500 8 + 53671032 aaggcAGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681446 8 + 59248254 aaggcAGT i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5478148 8 + 7714307 aaggcAGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285185 8 + 50890351 aaggcAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28581455 8 + 49145316 TAGGCAGt i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1634745 8 - 2680843 aaggcAGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 382464 8 - 4471408 aaggcAGT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5493189 8 + 5549422 AATTCAGT i otoGar3.GL873654 I 624 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e saiBol1.JH378197 5425300 601 + 8899380 I e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=3971.000000 s hg38.chr19_GL383574v1_alt 90305 1 + 155864 C s panTro5.chr19 36158864 1 + 61309027 C i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322593 1 - 8369475 C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916115 1 - 106955855 c i nomLeu3.chr10 I 439 C 0 s rheMac8.chr19 30229508 1 + 53671032 C i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681454 1 + 59248254 C i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5478156 1 + 7714307 C i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285193 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28581463 1 + 49145316 t i calJac3.chr22 C 0 I 3 s cebCap1.NW_016107633v1 1634753 1 - 2680843 C i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 382472 1 - 4471408 C i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5493197 1 + 5549422 T i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e saiBol1.JH378197 5425300 601 + 8899380 I e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=-6635.000000 s hg38.chr19_GL383574v1_alt 90306 3 + 155864 t----------tt s panTro5.chr19 36158865 3 + 61309027 t----------tt i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63916116 3 - 106955855 c----------tt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229509 13 + 53671032 ttttgttttgttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681455 13 + 59248254 ttttgttttgttt i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5478157 12 + 7714307 tttttgtttg-tt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285194 12 + 50890351 tttttgtttg-tt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28581467 3 + 49145316 ----------ttt i calJac3.chr22 I 3 C 0 s aotNan1.NW_018505377v1 382473 3 - 4471408 ----------ttt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5493198 3 + 5549422 ----------TTT i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e cebCap1.NW_016107633v1 1634754 0 - 2680843 C e saiBol1.JH378197 5425300 601 + 8899380 I e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e gorGor5.CYUI01015150v1 6322594 0 - 8369475 C e panPan2.chr19 39903442 937 + 64411610 I a score=348890.000000 s hg38.chr19_GL383574v1_alt 90309 115 + 155864 --ttttt----tttttttttttgagacgaagtttccctcttgtcgcccaggctggagtgcaatggcgcgatc-tcggctcactgcaaacttcgccccccagattcaagtgattctcctgcct s panTro5.chr19 36158868 113 + 61309027 --ttttt----tttttttttttgagacgaagtttccctcttgtcgcccaggctggagtgcaatggcgcgatcgttggctcactgcaaacctcgccccccagattc-agtgattctcc--gct i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322594 113 - 8369475 ----ttt----tttttttttttgagacgaagtttccctctggccgcccaggctggagtgcaatggcgtgatc-tcggctcactgcaaccttcgcctcccagattcaagtgattctcctgcct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916119 115 - 106955855 --ttttt----tttttttttttgagacaaagtttctcttttgtcgcccagactggagtgcaatggcgcgatc-tcggctcactgcaacgttcgcctcccagattcaagtgattctcctgcct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229522 115 + 53671032 --tgttt----tgttttgttttgagacgaagtttccctcctgtcacccaggctggagtgcaatggcgcgatc-tcggctcactgcaacctccgcctcccagattcaagtgattctcctgcct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681468 115 + 59248254 --tgttt----tgttttgttttgagacgaagtttccctcctgtcacccaggctggagtgcaatggcgtgatc-tcggctcactgcaacctccgcctcccagattcaagtgattctcctgcct i macFas5.chr19 C 0 I 127 s cerAty1.NW_012005268v1 5478169 115 + 7714307 --tgttt----tgttttgttttgagacgaagtttccctcttgtcacccaggctggagtgcaatggcgtgatc-tcggctcactgcaacctccgcctcccagagtcaagtgattctcctgcct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285206 115 + 50890351 --tgttt----tgctttgttttgagacgaagtttccctcttgtcgcccaggctggagtgcagtggcgcgatc-tcggctcactgcaacctttgcctcccagattcaagtgattctcctgcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28581470 115 + 49145316 --ttttt----tttttttttttgagacgaagttttgctcccgttgcccaggctggagtgcagtggcacgatc-tcacctcagtgcaaccttcacctcctgggttcaagagattcccctgtct i calJac3.chr22 C 0 C 0 s otoGar3.GL873654 5493201 117 + 5549422 tttgtttttggtttgtttttttgagacagagcctcaag-gtatccccctgggtagagtgctgtggt---atc-acagctcacagcaacctccaactcctgggctcaagcgagtctcctgcct i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e aotNan1.NW_018505377v1 382476 0 - 4471408 C e cebCap1.NW_016107633v1 1634754 0 - 2680843 C e saiBol1.JH378197 5425300 601 + 8899380 I e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=158828.000000 s hg38.chr19_GL383574v1_alt 90424 51 + 155864 ------------cagcctcccaagttgctgggattacaggcatgcgccaccatgcccagcta--a s panTro5.chr19 36158981 53 + 61309027 ------------cagcctcccaagtcgctgggattacaggcatgcgccaccatgcccagcaaatA i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322707 53 - 8369475 ------------cagcctcccaagttgctgggattacaggcatgcgccaccatgcccagctaatt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916234 48 - 106955855 ------------cagcctcccaagtagctgggattacaggcatgtgccaccatgcccggc----- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229637 51 + 53671032 ------------cagcctcccaagtagctgggattacaggcatgtgccaccacgcctggctaa-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681710 51 + 59248254 ------------cagcctcccaagtagctgggattacaggcatgtgccaccacgcctggcTAA-- i macFas5.chr19 I 127 C 0 s cerAty1.NW_012005268v1 5478284 51 + 7714307 ------------cagtctcccaagtagctgggattacaggcatgtgccaccacgcctggctaa-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285321 51 + 50890351 ------------cagcctcccaagtagctgggattacaggcatgtgccaccacgcctggctaa-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28581585 51 + 49145316 ------------cagcctcccgagtagctgggattacaggcgtgtgtcatcactcctggctaa-- i calJac3.chr22 C 0 C 0 s otoGar3.GL873654 5493318 63 + 5549422 cagcctcccaagtagcttcccaagtagctgggaccacaggtgcccgccacaatgcccggctat-- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e aotNan1.NW_018505377v1 382476 0 - 4471408 C e cebCap1.NW_016107633v1 1634754 0 - 2680843 C e saiBol1.JH378197 5425300 601 + 8899380 I e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=4255.000000 s hg38.chr19_GL383574v1_alt 90475 2 + 155864 tt s panTro5.chr19 36159034 2 + 61309027 tt i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322760 2 - 8369475 tt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916282 1 - 106955855 -t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229688 1 + 53671032 -t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681761 1 + 59248254 -t i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5478335 1 + 7714307 -t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285372 1 + 50890351 -t i chlSab2.chr6 C 0 C 0 s aotNan1.NW_018505377v1 382476 2 - 4471408 tt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5493381 2 + 5549422 tt i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e cebCap1.NW_016107633v1 1634754 0 - 2680843 C e saiBol1.JH378197 5425300 601 + 8899380 I e calJac3.chr22 28581636 0 + 49145316 C e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=55907.000000 s hg38.chr19_GL383574v1_alt 90477 17 + 155864 tttttttt--------------ttttttttt s panTro5.chr19 36159036 17 + 61309027 tttttttt--------------ttttttttt i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322762 17 - 8369475 tttttttt--------------ttttttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916283 17 - 106955855 tttttttt--------------ttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229689 17 + 53671032 tttttttt--------------ttttttttt i rheMac8.chr19 C 0 I 129 s macFas5.chr19 34681762 16 + 59248254 tttttttt--------------tttttttt- i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5478336 10 + 7714307 tttttttt--------------tt------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285373 17 + 50890351 tttttttt--------------ttctttttt i chlSab2.chr6 C 0 I 10 s calJac3.chr22 28581636 16 + 49145316 -ttttgta--------------tttttaata i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1634754 17 - 2680843 tttttttt--------------ttttttttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 382478 17 - 4471408 tttttttt--------------ttttttttt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5493383 31 + 5549422 ctttttttggttgcagccatcattgttgttt i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e saiBol1.JH378197 5425300 601 + 8899380 I e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=171386.000000 s hg38.chr19_GL383574v1_alt 90494 57 + 155864 ------------------------------------------------------------------------------gagacggagtttcgcttttgttgtccaggctggagtacaatggcttgatctcagctc s panTro5.chr19 36159053 57 + 61309027 ------------------------------------------------------------------------------gagacggagtttcgcttttgttgtccaggctggagtacaatggcttgatctcagctc i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322779 57 - 8369475 ------------------------------------------------------------------------------gagacggagtttcgcttttgttgtccaggctggagtacaatggcttgatctcagctc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916300 57 - 106955855 ------------------------------------------------------------------------------gtgacggagtttctctcttgttgtccagtctggagtacaatggcttgatctcagctc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229835 57 + 53671032 ------------------------------------------------------------------------------gagatggagttttgctcttattgtccaggctggagtacaatggctccatctcagctc i rheMac8.chr19 I 129 C 0 s macFas5.chr19 34681778 57 + 59248254 ------------------------------------------------------------------------------gagatggagttttgctcttattgtccaggctggagtacaatggctccatctcagctc i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5478346 57 + 7714307 ------------------------------------------------------------------------------gagatggagttttgctcttattgtccaggctggagtacaatggctccatctcagctc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285400 57 + 50890351 ------------------------------------------------------------------------------gagatggagttttgctcttattgtccaggctggagtacaatggctcgatctcagctc i chlSab2.chr6 I 10 C 0 s calJac3.chr22 28581652 30 + 49145316 ------------------------------------------------------------------------------gagacagggcttcac-cattttggtcaggct-------------------------- i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1634771 57 - 2680843 ------------------------------------------------------------------------------gagatgaagttttgctcctgtttcacaggctgaagtgcagtggtgcgatctcacctc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 382495 57 - 4471408 ------------------------------------------------------------------------------gagatgaagttttgctcctgttgcccaggctggagtgcagtggtgcgatctcgcctc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5493414 131 + 5549422 ggcgggcccaggctagattcaaacttgccaccttagatgtatgtggctgatgccttagccacttgagccacaggcgccaagtcAAAgtctcact-ttgttattctcagtagagtgctgtggc---attgtaactc i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e saiBol1.JH378197 5425300 601 + 8899380 I e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=8233.000000 s hg38.chr19_GL383574v1_alt 90551 3 + 155864 act s panTro5.chr19 36159110 3 + 61309027 act i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322836 3 - 8369475 act i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916357 3 - 106955855 acc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229892 3 + 53671032 acc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681835 3 + 59248254 acc i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5478403 3 + 7714307 acc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285457 3 + 50890351 act i chlSab2.chr6 C 0 C 0 s saiBol1.JH378197 5425901 3 + 8899380 acc i saiBol1.JH378197 I 601 C 0 s cebCap1.NW_016107633v1 1634828 3 - 2680843 agt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 382552 3 - 4471408 agt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5493545 3 + 5549422 aca i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e calJac3.chr22 28581682 0 + 49145316 C e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e macNem1.NW_012011689v1 4548694 28 - 13342542 I e panPan2.chr19 39903442 937 + 64411610 I a score=475035.000000 s hg38.chr19_GL383574v1_alt 90554 75 + 155864 gcaacctccgcctcctgggttcaagtgattctgttgcctt-agcctcctgagtagctggg---attacaggcatgcgcc s panTro5.chr19 36159113 75 + 61309027 gcaacctccgcctcctgggttcaagtgattctgttgcctt-agcctcctgagtagctggg---attacaggcatgcgcc i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322839 73 - 8369475 gcaacctccgcctcctgggttcaagtgattctgttgcctt-agc--cctgagtagctggg---attacaggcatgcgcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916360 75 - 106955855 gcaacctccgcctcccgggttcaagtgattctgctgcctc-agcctcccgagtagctggg---attacaggcatgcacc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229895 75 + 53671032 gcaacctccgcctcccaggttcaagcgattctgctgcttc-agcctcccgagtagctggg---attacaggcatgcgcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681838 75 + 59248254 gcaacctctgcctcccaggttcaagcgattctgctgcttc-agcctcccgagtagctggg---attacaggcatgcgcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4548722 75 - 13342542 gcaacctccgcctcccaggttcaagcgattctgctgcttc-agcctcccgagtagctggg---attacaggcatgcgcc i macNem1.NW_012011689v1 I 28 C 0 s cerAty1.NW_012005268v1 5478406 75 + 7714307 gcaacctccgcctcccaggttcaagcgattctgctgcttc-agcctcccgagtagctggg---attacaggcatgcgcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285460 75 + 50890351 gcaacctccgccttccaggtgcaagagattctgctgcttc-agcctcccgagtagctggg---attacaggcatgcgcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28581682 77 + 49145316 --agtctcgaactcctgacctcaggtgatctacctgcctcaagcctcccaaagtgctgggattattacagacatgagcc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5425904 74 + 8899380 acaacctccgcctcctgggttcaggcaattctcctgcctc-agcctcctgagtagctggg---attacaggcacgtgc- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1634831 75 - 2680843 gcaacccccacctcctgggttcaaacgattctcctgtctc-agcctcccaagtagctggg---attacaggcatgtgtc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 382555 75 - 4471408 gcaacctccacctcctgggttcaagcgattctcctgtctc-agcctcccgagtagctgag---attacaggcgtgtgtc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5493548 75 + 5549422 acagcttcagagtcttgagctcaagagatcctcctgcctt-agcctccagagtagctggg---actataggcacctgcc i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I e panPan2.chr19 39903442 937 + 64411610 I a score=20546.000000 s hg38.chr19_GL383574v1_alt 90629 3 + 155864 acc s panTro5.chr19 36159188 3 + 61309027 acc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39904379 3 + 64411610 acc i panPan2.chr19 I 937 C 0 s gorGor5.CYUI01015150v1 6322912 3 - 8369475 acc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916435 3 - 106955855 acc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229970 3 + 53671032 acc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681913 3 + 59248254 acc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4548797 3 - 13342542 acc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5478481 3 + 7714307 acc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285535 3 + 50890351 acc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28581759 3 + 49145316 acc i calJac3.chr22 C 0 I 707 s cebCap1.NW_016107633v1 1634906 3 - 2680843 atc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 382630 3 - 4471408 atc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5493623 3 + 5549422 aca i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e saiBol1.JH378197 5425978 0 + 8899380 C e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I a score=250788.000000 s hg38.chr19_GL383574v1_alt 90632 41 + 155864 acacctggctaattttgtatttttagtagagacggggtttc s panTro5.chr19 36159191 41 + 61309027 acacctggctaattttgtatttttagtagagacggggtttc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39904382 41 + 64411610 acacctggctaattttgtatttttagtagagacggggtttc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322915 41 - 8369475 acacctggctaattttgtatttttagtagagacagggtttc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916438 41 - 106955855 acacctggctaattttgtatttttagtagagacggagtttc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30229973 41 + 53671032 acacctggctaattttgtatttttagtagagatggggtttc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681916 41 + 59248254 acacctggctaattttgtatttttagtagagatggggtttc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4548800 41 - 13342542 acacctggctaattttgtatttttagtagagatggggtttc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5478484 41 + 7714307 acacctggctaattttgtatttttagtagagatggggtttc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285538 41 + 50890351 acacctggctaattttgcatttttagtagagacggggtttc i chlSab2.chr6 C 0 C 0 s saiBol1.JH378197 5425978 31 + 8899380 ---------taattttgtatttttaatagagacgggg-ttc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1634909 41 - 2680843 acttctggctaattttgtatttttaatagagaaggggtttc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 382633 40 - 4471408 actcctggctaattctgtatttttaatagagacaggt-ttc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5493626 31 + 5549422 acacctacctattt-----tttttaatgatgacgtc----- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e calJac3.chr22 28581762 707 + 49145316 I e colAng1.NW_012111697v1 2355439 4760 + 4274983 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I a score=916160.000000 s hg38.chr19_GL383574v1_alt 90673 114 + 155864 tccatgttggtcaggctggtcttgaactcccgacctcagatgacccgcctgcctcggcctcccaaagtgctggg---attacaggcgcgagccaccgtacccagccAGGGCAGTCTT s panTro5.chr19 36159232 114 + 61309027 tccatgttggtcaggctggtcttgaactcccgacctcagatgacccgcctgcctcggcctcccaaagtgctggg---attacaggcgcgagccaccgtacccagccAGGGCAGTCTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39904423 114 + 64411610 tccatgttggtcaggctggtcttgaactcccgacctcagatgacccgcctgcctcggcctcccaaagtgctggg---attacaggcgcgagccaccgtacccagccAGGGCAGTCTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6322956 114 - 8369475 tccatgttggtcaggctggtcttgaactcctgacctcagatgacccgcctgcctcggcctcccaaagtgctggg---attacaggcgcgagccaccgtacccagccAGGGCAGTCTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916479 114 - 106955855 tccatgttggtcaggctggtcttgaactccggacctcagatgacctgcccacctcggtctcccaaagtgctggg---attacaggtgggagccactgtgcccagcTAGTGCAGTCTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230014 114 + 53671032 tccatgttggtcaggccggtctcgaactcccgacctcagatgacctgcccgcctcagcctcccaaagtgctggg---attacaggcgtgagccaccgtgcccagccAGTGCAGTCTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34681957 114 + 59248254 tccatgttggtgaggccggtctcgaactcccgacctcagatgacctgcccgcctcagcctaccaaagtgctggg---attacaggcgtgagccaccgtgcccagccAGTGCAGTCTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4548841 114 - 13342542 tccatgttggtcaggccggtctcgaactcccgacctcagatgacctgcccgcctcagcctcccaaagtgctggg---attacaggcgtgagccaccgtgcccagccAGTGCAGTCTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5478525 114 + 7714307 ttcatgttggtcaggccggtctcgaactcccgacctcagatgacctgcccgcctcggcctcccaaagtgctggg---attacaggcgcgagccaccgtgcccagccAGTGCAGTCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285579 114 + 50890351 tccatgttggtcaggccggtctcgaactcccgacctcagatgacctgcccgcctcggcctcccaaagtgctggg---attacaggcgcgagccaccgtgcccagccAGTGCAGTCTT i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2350679 114 + 4274983 Tccatgttggtcaggccggtctcgaactcccaacctcagatgacctgcccgcctcggcctccctaagtgctggg---attgcaggcacgagccaccgtgcccagccAGTGCAGTCTT i colAng1.NW_012111697v1 T 4760 C 0 s saiBol1.JH378197 5426009 117 + 8899380 accatgttagtcaggctggtcttgaactcctgacctcaggtgatctgcctgcctcagcctcccaaagtgctgggattattacaggcatgagcccctgcgcccagccAGTGTAGTCTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1634950 117 - 2680843 accatgttagtcaggctggtcttgaactcctgacctcaggtgatctgcctgcctcagcctcccaaagtgctgggattattataggcatgagccaccgcgcccagccAGTGTAGTCTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 382673 117 - 4471408 accatgttggtcaggctggtcttgaactcctgacctcaggtgatctgcctgcctcagcctcccaaagtgctgggattattacaggcatgagccaccgcactcagccAGTGTAGTCTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5493657 97 + 5549422 tcgctcttgctcaggctggc------ctcttgagctcaagtaacccacctgtcttgacctcccagagtgttggg---attacaagtgggagccatcaagcctggcc----------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e calJac3.chr22 28581762 707 + 49145316 I e manLeu1.NW_012102454v1 912195 2101 - 2385121 I a score=526590.000000 s hg38.chr19_GL383574v1_alt 90787 64 + 155864 AAAGGCAAAGAAGGTGAACATTTGTGCTTAATTTCCCATCTAGAGTGAGCAAatctctctgcct s panTro5.chr19 36159346 64 + 61309027 AAAGGCAAAGAAGGTGAACATTTGTGCTTAATTTCCCATCTAGAGTGAGCAAatctctctgcct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39904537 64 + 64411610 AAAGGCAAAGAAGGTGAACATTTGTGCTTAATTTCCCATCTAGAGTGAGCAAatctctctgcct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323070 64 - 8369475 AAAGGCAAAGAAGGTAAACATTTGTGCTTAATTTCCCATCTAGAGTGAGCAAatctctctgcct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916593 64 - 106955855 AAAGGCAAAGAAGGTAAACTTTTGTGCTTGTTTTCCCATCTAGAGTGAGCAAatctctctgcct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230128 64 + 53671032 AAAGGCAAAGAAGGTAAACATTTGTGCTTGGTTTCCGATCTAGAGTGAGCAAatctctctgcct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682071 64 + 59248254 AAAGGCAAAGAAGGTAAACATTTGTGCTTGGTTTCCGATCTAGAGTGAGCAAatctctctgcct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4548955 64 - 13342542 AAAGGCAAAGAAGGTAAACATTTGTGCTTGGTTTCCGATCTAGAGTGAGCAAatctctctgcct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5478639 64 + 7714307 AAAGGCAAAGAAGGTAAACATTTGTGCTTGGTTTCCGATCTAGAGTGAGCAAGTCTCTctgcct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285693 64 + 50890351 AAAGGCAAAGAAGGTGAACATTTGTGCTTGGTCTCCGATCTAGAGTGAGCAAatctctctgcct i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2350793 64 + 4274983 AAAGGCAAAGAAGGTAAACATTTGTGCTTGGTTTCCAATCTAGAGTGAACAAatctctctgcct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28582469 61 + 49145316 aaaagcaaagaaGGTAAGTATTCCTGCTTGGTTT-CCATCTTGAGTGAGCAAA--TCTctgcca i calJac3.chr22 I 707 C 0 s saiBol1.JH378197 5426126 62 + 8899380 AAAGGCAAAGAAGGTAAATATTTGTGCTTGGTTTCCCGTCTGGAGTGAGCAAA--TCTctgcct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635067 62 - 2680843 AAAGACAAAGAAGGTAAATATTTGTGCTTGGTTTCCCGTCTTGAGTGAGAAAA--TCTctgcct i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 382790 62 - 4471408 AAAGGCAAAGAAGATAAATACTTGTGCTTGGTTTCCCGTCTTGAGTGAGCAAA--TCTctgcct i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5493754 33 + 5549422 ---------------------------TTGGTTTGCCATCTTGAAGCAGAAAA----Tctgcct i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 363945 281 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I a score=1627842.000000 s hg38.chr19_GL383574v1_alt 90851 169 + 155864 ctaccctggttcaaagccccttcacctcttgcgtgg---ac---tatgttaacctcctcattggttatcctctcttcatactgcattcttctgtgccatattctgtgcagaggccagaatgcactttggggaacacaaatctgattgtcaAATTCTGTCACATGTCTTAGAGAAG s panTro5.chr19 36159410 169 + 61309027 ctaccctggttcaaagccccttcacctcttgcgtgg---ac---tatgttaacctcctcattggttatcctctcttcatactgcattcttctgtgccatattctgtgcagaggccagaatgcactttggggaacacaaatctgattgtcaAATTCTGTCACATGTCTTAGAGAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39904601 169 + 64411610 ctaccctggttcaaagccccttcacctcttgcgtgg---ac---tatgttaacctcctcattggttatcctctcttcatactgcattcttctgtgccatattctgtgcagaggccagaatgcactttggggaacacaaatctgattgtcaAATTCTGTCACATGTCTTAGAGAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323134 169 - 8369475 ctaccctggttcaaagccccttcacctcttgcgtgg---ac---tatgttaacctcctcattggttatcctctcttcatactgcattcctctgtgccatattctgtgcagaggccagaatgcactttggggaacacaaatctgattgtcaAATTCTGTCACATGTCTTAGAGAAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916657 169 - 106955855 ctaccctagttcaaagccccttcacctcttgcgtcg---ac---tgtgttaacctcctcattggttatcctgtcttcatactgcattcttctgtgccatattctgtacagagaccagaatgcactttggggaacacgaatctgattgtcaAATTCTGTCACATGTCTTAGAGGAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230192 152 + 53671032 ctaccctagttcaaagccccttcacctcttgcgtgg---ac---tatggtaa---cctcattggttatcctc--------------tcttctgtgccatggtctgtgcagaggccagaatacactttggggaacacaaatctgattgtcaAATTCTGTCACATGTCTTAGAGGAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682135 152 + 59248254 ctaccctagttcaaagccccttcacctcttgcgtgg---ac---tatggtaa---cctcattggttatcctc--------------tcttctgtgccatggtctgtgcagaggccagaatacactttggggaacacaaatctgattgtcaAATTCTGTCACATGTCTTAGAGGAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549019 166 - 13342542 ctaccctagttcaaagccccttcacctcttgcgtgg---ac---tatggtaa---cctcattggttatcctctcttcatactgcattcttctgtgccatggtctgtgcagaggccagaatacactttggggaacacaaatctgattgtcaAATTCTGTCACATGTCTTAGAGGAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5478703 169 + 7714307 ctaccctagttcaaagccccttcacctcttgcgtgg---ac---tatggtagcctcctcattggttatcctctcttcatactgcattcttctgtgccatggtctgtgcagaggccagaatacactttggggaacacaaatctgattgtcaAATTCTGTCACATGTCTTAGAGGAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285757 169 + 50890351 ctaccctagctcaaagccccttcacctctcgcgtgg---ac---tatggtaacctcctcattggttatcctctcttcatattgcattcttctgtgccatggtctgtgcaggggccagaatacactttggggaacacaaatctgattgtcaAATTCTGTCACATGTCTTAGAGGAG i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2350857 169 + 4274983 ctaccctagttcaaagccccttcacctcttgcgtgg---ac---tatggtaacctcctcattggttatcctctcttcatactgcattcttctgtgccatagtctatgcagaggccagaatacactttgtggaacacaaatctgattgtcaAATTCTGTCACATGTCTTAGAGGAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28582530 169 + 49145316 ctaccttagttcaaagccccttcatctcttgcatgg---ac---gatggtaacctcctcactggttttcctgtcttcatactgcattcctctgtgccatattctgtgcagtggccagaatgcactttggggaacacaaatctgattgtcaAACTCTGTCACTTGTCTTACAGAAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426188 169 + 8899380 ctaccctagttcagagccccttcatctcttgcatgg---ac---gatggtaacctcctcactggttatcctgtcttcatactgcattcctctgtgccatatcctatgcagtggccagaatgcactttagggaatacaaatctgattgtcaAACTCTGTCACTTGTCTTAGAGAAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635129 169 - 2680843 ctaccctagttcaaagccccttcatctcttgcgtgg---aa---gatggtaatctcctcactggttatcctgtcttcatgctgcattcctctgtgccatatcctgtgcagtggccagaatgcactttagggaacacaaatctgattgtcaAACTCTGTCACTTGTCTTAGAGAAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 382852 169 - 4471408 ctaccctagttcaaagccccttcatctcttgcatgg---ac---gatggtaacctcctcactggttatcctgtcttcatactccattcctctgtgccatattctgtgcagtggccagaatgcactttggggaacacaaatctgattgccaaactctgtcacttgtctTAGAGAAG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5493787 169 + 5549422 ttacctgagtccaaggcaccgtcaactcttgcccagaatac---tgtggtgacttcctcattggtcaccct--catccacctacgtccctccactctattttctatgcagcggcca-aatggactttcaggaacacaaatttgattgtcaaattatatcacATGTTTTAGAGAAG i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 364226 157 + 643850 ctgccctagtttgaagcaccttctattcttgcctgg---actattatagtagcctcctcattgggaaccctccatccataccacacccttc----caatttcctacggagtagtcaggctgaacttttgaaagcgcagg--tgattgtcaAAT---------TATCTTAGAGAAG i dasNov3.JH563638 I 281 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I a score=279107.000000 s hg38.chr19_GL383574v1_alt 91020 27 + 155864 GCATCTAATCTGGATGCCTTAAGAGAT s panTro5.chr19 36159579 27 + 61309027 GCATCTAATCTGGATGCCTTAAGAGAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39904770 27 + 64411610 GCATCTAATCTGGATGCCTTAAGAGAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323303 27 - 8369475 GCATCTAATCTGGATGCCTTAAGAGAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916826 27 - 106955855 GCATCTAACCTGGAAGCCTTAAGAGAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230344 27 + 53671032 GCATCTAATCTGGAAGCCTTAAGAGAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682287 27 + 59248254 GCATCTAATCTGGAAGCCTTAAGAGAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549185 27 - 13342542 GCATCTAATCTGGAAGCCTTAAGAGAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5478872 27 + 7714307 GCATCTAATCTGGAAGCCTTAAGAGAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285926 27 + 50890351 GCATCTAATCTGGAAGCCTTAAGGGAT i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2351026 27 + 4274983 GCATCTAATCTGGAAGCCTTAAGAGAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28582699 27 + 49145316 GCATCTAATCTGGAAGCCTTAAGAAAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426357 27 + 8899380 GCATCTAATCTGGAAGCCTTAAGAGAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635298 27 - 2680843 GCATCTAATCTGGAAGCCTTAAGAGAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383021 27 - 4471408 GCATCTAATCTGGAAGCCTTAAGAGAT i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 364383 27 + 643850 CCATCTAATGTGGAGGCCCCAAGAGAT i dasNov3.JH563638 C 0 I 25 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e otoGar3.GL873654 5493956 0 + 5549422 C e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I a score=775677.000000 s hg38.chr19_GL383574v1_alt 91047 91 + 155864 GGTggccaggcagggtggctcaaacctataatcccagcactttgggaggccaa-ggcgggtggatcacttgaggtcaggaattcgagacagt s panTro5.chr19 36159606 91 + 61309027 GGTggccaggcagggtggctcaaacctataatcccagcactttgggaggccaa-ggcgggtggatcacttgaggtcaggaattcgagacagt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39904797 91 + 64411610 GGTggccaggcagggtggctcaaacctataatcccagcactttgggaggccaa-ggcgggtggatcacttgaggtcaggaattcgagacagt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323330 90 - 8369475 GGTggccaggcagggtggctcaaacctataatcccagcac-ttgggaggccaa-ggcgggtggatcacttgaggtcaggaattcgagacagt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916853 91 - 106955855 GGTggccaggcagggtggctcaaacctataatcccagcactttgggaggccga-ggcctgtggatcacttgaggtcaggagttcaagacagt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230371 92 + 53671032 TGTggccaggcagggtggctcaaacctgtaatcccagcactttgggaagccgagggggggtggatcatttgaggtcaggagttcgagacagt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682314 91 + 59248254 TGTggccaggcagggtggctcaaacctataatcccagcactttgggaggccga-ggcgggtggatcatttgaggtcaggagttcgagacagt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549212 91 - 13342542 TGTggccaggcagggtggctcaaacctataatcccagcactttgggaggccga-ggcgggtggatcatttgaggtcaggagttcgagacagt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5478899 91 + 7714307 TGTggccaggcagggtggctcaaacctataatcccagcactttgggaggccga-ggcaggtggatcatttgaggtcaggagttcgagacagt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29285953 91 + 50890351 TGTggccaggcagggtggctcaaacctataatcccagcactttgggaggccta-ggcgggtggatcatttgatgtcaggagttcgagacagt i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2351053 91 + 4274983 GGTggccaggcagggtggctcaaacctataatcccagcactttgggaggccga-ggcgggtggatcatttgaggtcaggagttcgagacagt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28582726 91 + 49145316 GGTggccaagcacagtggctcacacctgtaatcccagcactttgggaagccaa-ggtgggtggatcacttgaggttaggagtttgagacagc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426384 91 + 8899380 GGTggccaggtacagtggctcacacctgtaatcccagcactttgggaagtcaa-aatgggtggatcacttgaggtcaggagtttgagacagc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635325 91 - 2680843 GGTggccacacacagtggctcacacctgtaatcccagcactttgggaagccaa-attgggtggatcacttgaggtcaggagtttgagacagc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383048 91 - 4471408 GGTggtcaggcacagtggctcacacctgtaatcccagcactttgggaagccaa-ggtgggtcgatcacttgaagtcaggagtttgagacagg i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 364410 25 + 643850 I e otoGar3.GL873654 5493956 0 + 5549422 C e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I a score=228618.000000 s hg38.chr19_GL383574v1_alt 91138 29 + 155864 ctggccaacatggcgaaa-cctgtctctac s panTro5.chr19 36159697 29 + 61309027 ctggccaacatggcgaaa-cctgtctctac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39904888 29 + 64411610 ctggccaacatggcgaaa-cctgtctctac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323420 29 - 8369475 ctggccaacatggcgaaa-cctgtctctac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916944 29 - 106955855 ctggccaacatggcaaaa-cctgtctctac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230463 29 + 53671032 ccggccaacatggcgaaa-cctgtccctac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682405 29 + 59248254 ccggccaacatggcgaaa-cctgtccctac i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549303 29 - 13342542 ccggccaacatggcgaaa-cctgtccctac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5478990 29 + 7714307 ccggccaatgtggcgaaa-cctgtccctac i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286044 29 + 50890351 ccggccaacatggcgcaa-cctgtccctac i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2351144 29 + 4274983 ccggccaacatggcaaaa-cctgtccctac i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28582817 30 + 49145316 ctggccaacatggtgaaaacccatatctac i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426475 30 + 8899380 ctggccaacatggtgaaaccccatctctac i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635416 30 - 2680843 ctggccaacatggtgaaactccatctctac i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383139 30 - 4471408 ctagccaacatggtgaaaccccatctctac i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5493956 23 + 5549422 CTATCTAATATGGAG-------GCCTCCAC i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 364410 25 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I a score=266096.000000 s hg38.chr19_GL383574v1_alt 91167 33 + 155864 caaaaatacaaaaattagttgggcgtgatggcg s panTro5.chr19 36159726 33 + 61309027 caaaaatacaaaaattagttgggcgtgatggcg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39904917 33 + 64411610 caaaaatacaaaaattagttgggcgtgatggcg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323449 33 - 8369475 caaaaatacaaaaattagttgggcgtgatggcg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63916973 33 - 106955855 taaaaatacaaaaattagttgggcatgatggtg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230492 33 + 53671032 taaaaatacaaaacttagttgggcatgatgaca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682434 33 + 59248254 taaaaatacaaaacttagttgggcgtgatgaca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549332 33 - 13342542 taaaaatacaaaacttagttgggcgtgatgaca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479019 33 + 7714307 taaaaatacaaaaattagttgggcgtgatgaca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286073 33 + 50890351 taaaaatacaaaaattagttgggcgtgatgaca i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2351173 33 + 4274983 taaaaatacaaaaatcagttgtgcctgatgaca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28582847 33 + 49145316 taaaaatacaaaaattagtcgggcatggtggtg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426505 33 + 8899380 taaaaatacaaaaattagttgggcgtggtggtg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635446 33 - 2680843 taaaaatacaaaaattagtcggccgtggtggtg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383169 33 - 4471408 taaaaatacaaaaattagtcaggcgtggtggtg i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 364410 25 + 643850 I e otoGar3.GL873654 5493979 0 + 5549422 C e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T e manLeu1.NW_012102454v1 912195 2101 - 2385121 I a score=1405565.000000 s hg38.chr19_GL383574v1_alt 91200 149 + 155864 catgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagcccagattgtgccactgcactccagcctgtgcgacagaatgagactctgtctcaaaacaaaa--aagaaaaaag s panTro5.chr19 36159759 149 + 61309027 catgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagcccagattgtgccactgcactccagcctgtgcgacagaatgagactctgtctcaaaacaaaa--aagaaaaaag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39904950 147 + 64411610 catgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagcccagattgtgccactgcactccagcctgtgcgacagaatgagactctgtctcaaaacaaaa--a--gaaaaag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323482 149 - 8369475 catgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtaagcccagattgtgccactgcactccagcctgtgcgacagaatgagactctgtctcaaaacaaaa--aagaaaaaag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917006 149 - 106955855 cttgtctgtagtcccagctactcaggaggctgaggcaggagaatcacttgaacctgggagacggaggtggcagtgagcccagattgtgccactgcactccagcctgggcgacagaacgagactctgtctcaaaacaaaa--aagaaaaaag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230525 149 + 53671032 catgtctgtagtcccagctactcgggaggctgaggcaggagaatcagttcaacctgggaggcggaggttgcagtgagccaagatcgtgccactgcactccaacctgggcgacagaatgagactctgtctcaaaacaaaa--aagaaaaaag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682467 149 + 59248254 catgtctgtagtcccagctactcgggaggctgaggcaggagaatcagttcaacctgggaggcggaggttgcagtgagccaagatcgtgccactgcactccaacctgggcgacagaatgagactctgtctcaaaacaaaa--aagaaaaaag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549365 149 - 13342542 catgtctgtagtcccagctactcgggaggctgaggcaggagaatcagttcaacctgggaggcggaggttgcagtgagccaagatcgtgccactgcactccaacctgggcgacagaatgagactctgtctcaaaacaaaa--aagaaaaaag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479052 142 + 7714307 catgtctgtagtcccagctactcgggaggctgaggcaggagaatcagttgaacctgggaggcggaggttgcagtgagccaagatcgtgccactgcactccagcctgggcaacagaatgagactctgtctc-------aa--aagaaaaaag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286106 149 + 50890351 cgtgtctgtagtcccagctactcgggaggctgaggcacgagaatcagttgaacctgggaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagaatgagacactgtctcaaaacaaaa--aagaaaaaag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914296 142 - 2385121 CATgtctgtagtcccagctactcgggaggctgaggcaggagaatcagttgaacctgggaggcggaggttgcaatgagccaagatcgtgccactgcactccagcctgggcgacagaatgagactctgtctt-------aa--aagaaaaaag i manLeu1.NW_012102454v1 I 2101 C 0 s colAng1.NW_012111697v1 2351206 147 + 4274983 catgtc--taatcccagctactcgggaggctgaggcaggagaatcagttgaacctgggaggtggaggttgcagtgagccaaggtcgtgccactgcactccagcctgggcgacagaatgagactctgtctcaaaacaaaa--aagaaaaaag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28582880 151 + 49145316 catgtctgtagtctcagctacttgggaggctgaggcaggagaatcacttgaacctggtaggcagcgattgcagtgagccaagatcatgccactgcactccagcctgggtgacagagcgagactctgtctcaaaacaaaagagaggaaaaaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426538 151 + 8899380 catgtctgtagtctcagctacttgggaggctgaggcagaagaatcacttgaacctagtaggcggcggttgcagtgagccaagattatgccactgcatgccagcctgggtgacagagcgagactctgtctcaaaaaaaaaaGAGTGGAAAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635479 150 - 2680843 catgtctgtagtctcagctacttgggaggctgaggcagaagaatcacttgaacctagtaggcggtggttgtagtgagctgagatcatgccactgcactccagcctgggtgacagagcgagactctgtcttaaaacaaaa-gagcggaaaaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383202 151 - 4471408 catgtctgtagtctcagctacttgggaggctgaggcaggagaatcacttgaacctagtaggcggtggttgcagtgagccgagatcatgtcactgcactccagcctgggtgacagagtgagactctgtctcaaaacaaaagagaggcaaaaa i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 364410 25 + 643850 I e otoGar3.GL873654 5493979 0 + 5549422 C e mm10.chr7 111102954 10741 - 145441459 I e canFam3.chr1 118048185 8237 + 122678785 T a score=20880.000000 s hg38.chr19_GL383574v1_alt 91349 3 + 155864 aaa s panTro5.chr19 36159908 3 + 61309027 aaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905097 3 + 64411610 aaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323631 3 - 8369475 aaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917155 3 - 106955855 aaG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230674 3 + 53671032 aaG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682616 3 + 59248254 aaG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549514 3 - 13342542 aaG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479194 3 + 7714307 aaG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286255 3 + 50890351 aag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914438 3 - 2385121 aaG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351353 3 + 4274983 aaG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583031 3 + 49145316 aCG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426689 3 + 8899380 ACG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635629 3 - 2680843 aCG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383353 3 - 4471408 aCG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4631225 3 - 122678785 AAG i canFam3.chr1 I 582 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 364410 25 + 643850 I e otoGar3.GL873654 5493979 0 + 5549422 C e mm10.chr7 111102954 10741 - 145441459 I a score=702100.000000 s hg38.chr19_GL383574v1_alt 91352 63 + 155864 aGATGGTGTCCTTCTGGAAGTTGTATTGCCGCAACTATGG----TCTGATGGGAATGAGATCATGGT s panTro5.chr19 36159911 63 + 61309027 aGATGGTGTCCTTCTGGAAGTTGTATTGCCGCAACTATGG----TCTGATGGGAATGAGCTCATGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905100 63 + 64411610 aGATGGTGTCCTTCTGGAAGTTGTATTGCCGCAACTATGG----TCTGATGGGAATGAGCTCATGGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323634 63 - 8369475 aGATGCTGTCCTTCTGGAAGTTGTATTGCCGCAACTATGG----TCTGATGGGAATGAGCTCATGGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917158 63 - 106955855 AGATGGTGTCCTTCTGGAAGTTGTATTGCCGCACCTATGG----TCTGATGGGAATGAGATCATGGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230677 63 + 53671032 AGACGGTGTCCTTCTGGAAGTGGTATTACCACAGCTATGG----TCTGATGGGAATGAGATCATGGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682619 63 + 59248254 AGACGGTGTCCTTCTGGAAGTGGTATTACCACAGCTATGG----TCTGATGGGAATGAGATCATGGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549517 63 - 13342542 AGACGGTGTCCTTCTGGAAGTGGTATTACCACAGCTATGG----TCTGATGGGAATGAGATCATGGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479197 63 + 7714307 AGACGGTGTCCTTCTGGAAGTGGTATTGCCACAGCAATGG----TCTGATGGGAATGAGATCATGGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286258 63 + 50890351 agaaGGTGTCCTTCTGGAAGTGGTATTGCCACAGCTATGG----TCTGATGGGAATGAGATCATGGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914441 63 - 2385121 AGACGGTGTCCTTCTGGAAGTGGTATTGCCACAGCTATGG----TCTGATGGGAATGAGATCATGGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351356 63 + 4274983 AGACGGTGTCCTTCTGGAAGTTGTATTGCCACAGCTACGG----TCTGATGGGAATGAGATCATGGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583034 63 + 49145316 AGATGGTGTCCTTCTGGAAGTTGTATTGCCAAAACCATGG----TCTGATGAGAATGAGATCATGGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426692 63 + 8899380 AGATGGTGTCCTCCTGGAAGGTGTATTGCCGAAATCATGG----TCTGATGAGAATGACATCATGGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635632 63 - 2680843 AGATGGTGTCCTTCTGGAAGTTGTATTGCCGAAACCATGG----TCTGATGAGAGTGAGATCATGGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383356 63 - 4471408 AGATGGTGTCCTTCTGGAAGTTGTATTGCTGAAACCATGG----TCTGATGAGAATGAGATCATGGT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5493979 63 + 5549422 AAATTGTGCACTCCTGGAAATCATATCGCAGCAGTTGTGG----TCTGATGTAAACGTGATCACAGT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4631228 67 - 122678785 AGATTGTGTCCTGCTGGAAATTCCATCGCTGCAACTATGTGTGCTCAGATACGGACGTGAACGTGGG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 590355 703 + 2501019 I e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 364410 25 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I a score=28611.000000 s hg38.chr19_GL383574v1_alt 91415 2 + 155864 GT s panTro5.chr19 36159974 2 + 61309027 GT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905163 2 + 64411610 GT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323697 2 - 8369475 GT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917221 2 - 106955855 GT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230740 2 + 53671032 GT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682682 2 + 59248254 GT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549580 2 - 13342542 GT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479260 2 + 7714307 GT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286321 2 + 50890351 GT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914504 2 - 2385121 GT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351419 2 + 4274983 GT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583097 2 + 49145316 GT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426755 2 + 8899380 GT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635695 2 - 2680843 GT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383419 2 - 4471408 GT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 591058 2 + 2501019 GT i proCoq1.NW_012149263v1 I 703 C 0 s otoGar3.GL873654 5494042 2 + 5549422 GT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4631295 2 - 122678785 CT i canFam3.chr1 C 0 C 0 e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 364410 25 + 643850 I e mm10.chr7 111102954 10741 - 145441459 I a score=167654.000000 s hg38.chr19_GL383574v1_alt 91417 11 + 155864 CAAACAGAC----CC s panTro5.chr19 36159976 11 + 61309027 CAAACAGAC----CC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905165 11 + 64411610 CAAACAGAC----CC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323699 11 - 8369475 CAAACAGAC----CC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917223 11 - 106955855 CAAGCAGAC----CC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230742 11 + 53671032 CAAACAGAC----CC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682684 11 + 59248254 CAAACAGAC----CC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549582 11 - 13342542 CAAACAGAC----CC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479262 11 + 7714307 CAAACAGAC----CC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286323 11 + 50890351 CAAACAGAC----CC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914506 11 - 2385121 CAAACAGAC----CC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351421 11 + 4274983 CAAACAGAC----CC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583099 11 + 49145316 CAAACAGAC----CC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426757 11 + 8899380 CAAACAGAC----CC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635697 11 - 2680843 CAAACAGAC----CC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383421 11 - 4471408 CAAACAGAC----CC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 591060 11 + 2501019 CAAACAGAC----CC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5494044 11 + 5549422 CAAACAGAC----CC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111113695 13 - 145441459 CAAACAGGCAA--AC i mm10.chr7 I 10741 C 0 s canFam3.chr1 4631297 15 - 122678785 CAAGCAGCCCGCCCC i canFam3.chr1 C 0 C 0 e micMur3.chr22 3975982 1047 - 30143674 I e dasNov3.JH563638 364410 25 + 643850 I a score=244561.000000 s hg38.chr19_GL383574v1_alt 91428 19 + 155864 ATGCT--------AAGGCAGCCCCCAG s panTro5.chr19 36159987 19 + 61309027 ATGCT--------AAGGCAGCCCCCAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905176 19 + 64411610 ATGCT--------AAGGCAGCCCCCAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323710 19 - 8369475 ATGCT--------AAGGCAGCCCCCAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917234 19 - 106955855 ATGCT--------AAGGCAGCCCCCAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230753 27 + 53671032 ATGCTACCCACAGAAAGCAGCCCCCAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682695 27 + 59248254 ATGCTACCCACAGAAAGCAGCCCCCAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549593 27 - 13342542 ATGCTACCCACAGAAAGCAGCCCCCAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479273 27 + 7714307 ATGCTACCCACAGAAGGCAGCCCCCAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286334 27 + 50890351 ATGCTACCCACAGAAGGCAGCCCCCAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914517 27 - 2385121 ATGCTACCCACAGAAGGCAGCCCCCAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351432 27 + 4274983 ATGCTACCCACAGAAGGCAGCCCCCAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583110 27 + 49145316 ACGCCATCCAGAGAAGCCAGCCCCCAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426768 27 + 8899380 ATGCCATCCAGAGAAGCCAGCCCCCAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635708 27 - 2680843 ATGCTATCCAAAGAAGCCAGGCCCCAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383432 27 - 4471408 ATGCCATCCAGAGAAGCCAGGCCCCAG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 591071 23 + 2501019 ATGCC----ACAGAAGCCAGCCCCCGA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5494055 23 + 5549422 ATGCT----GCAGAAGCTGGTCCCTGA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111113708 19 - 145441459 AAGCA--------AAACCAGTTCCCAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4631312 27 - 122678785 ATGCTACTCACAAGAGCCAGCCTCTGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 364435 19 + 643850 ATGTA--------GAGCCAGCCCCTGA i dasNov3.JH563638 I 25 C 0 e micMur3.chr22 3975982 1047 - 30143674 I a score=2604711.000000 s hg38.chr19_GL383574v1_alt 91447 169 + 155864 GCAGAGACTC--C---TCTCCCCATGGCCTCAGTACTGGTCTAGAACTCTGAGTCATAGATCTAAAAATAAGTCACAGGGCTGTGAGCT-AGCAGGA-CAGCTGC-ACACCTCTGGGTCTGTGGCAAGCCAGT-GGTCCGCAGTGGGGATGCCC-TATGTCCAGCACTGCTGCTGCTCC s panTro5.chr19 36160006 169 + 61309027 GCAGAGACTC--C---TCTCCCCATGGCCTCAGTACTGGTCTAGAACTCTGAGTCATAGATCTAAAAATAAGTCACAGGGCTGTGAGCT-AGCAGGA-CAGCTGC-ACACCTCTGGGTCTGTGGCAAGCCAGT-GGTCCGCAGTGGGGACACCC-TATGTCCAGCACTGCTGCTGCTCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905195 169 + 64411610 GCAGAGACTC--C---TCTCCCCATGGCCTCAGTACTGGTCTAGAACTCTGAGTCATAGATCTAAAAATAAGTCACAGGGCTGTGAGCT-AGCAGGA-CAGCTGC-ACACCTCTGGGTCTGTGGCAAGCCAGT-GGTCCGCAGTGGGGACGCCC-TATGTCCAGCACTGCTGCTGCTCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323729 169 - 8369475 GCAGAGACTC--C---TCTCCCCATGGCTTCAGTACTGGTCTAGAACTCTGAGTCATAGATCTAAAAATAAGTCACAGGGCTGTGAGCT-AGCAGGA-CAGCTGC-ACACCTCTGGGTCTGTGGCAAGCCAGT-GGTCCGCAATGGGGACGCCC-TATGCCCAGCACTGCTGCTGCTCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917253 169 - 106955855 GCAGAGACTC--C---TCTCCCCATAGCCTCAGTACTGGTCTACGACTCTGAGTCATAGATCTAAAAATAAGTCACAGCGCTGTGAGCT-AGCAGGA-CAGCTGC-ACACCTCTGGGTCTGTGGCGAGCCAGT-GGTCCGCAGTGGGGATGCCC-TACGTCCAGCACTGCTGCTGCTCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230780 169 + 53671032 GCAGAGACTC--A---TCTCCCCATGGCCTCAGTACCGGTCTAGGCCTCTGAGTCATAGATCTAAAAATAAGTCACAGGGCTGTGAGCT-AGCAGGA-CAGCTGC-ACACCTCTGGGTCTATGGTGAGCCAGT-GGTCCACAGTGGGAACGCCC-TGTGTCCAGCACTGCTGCTGCTCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682722 169 + 59248254 GCAGAGACTC--A---TCTCCCCATGGCCTCAGTACCGGTCTAGGCCTCTGAGTCATAGATCTAAAAATAAGTCACAGGGCTGTGAGCT-AGCAGGA-CAGCTGC-ACACCTCTGGGTCTATGGTGAGCCAGT-GGTCCACAGTGGGGACGCCC-TGTGTCCAGCACTGCTGCTGCTCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549620 169 - 13342542 GCAGAGACTC--A---TCTCCCCATGGCCTCAGTACCGGTCTAGGCCTCTGAGTCATAGATCTAAAAATAAGTCACAGGGCTGTGAGCT-AGCAGGA-CAGCTGC-ACACCTCTGGGTCTATGGTGAGCCAGT-GGTCCACAGTGGGGACGCCC-TGTGTCCAGCACTGCTGCTGCTCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479300 169 + 7714307 GCAGAGACTC--A---TCTCCCCATAGCCTCAGTACCGGTCTAGGCCTCTGAGTCATAGATCTAAAAATAAGTCACAGGGCTATGAGCT-AGCAGGA-CAGCTGC-ACACCTCTGGGTCTATGGTGAGCCAGT-GGTCCACAGTGGGGACGCCC-TGTGTCCAGCACTGCTGCTGCTCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286361 168 + 50890351 GCAGAGACTC--A---TGTCCCCATGGCCTCAGTACTGGTCTAGGCCTC-GAGTCATAGATCTAAAAATAAGCCACAGGGCTGTGAGCT-AGCAGGA-CAGCTGC-ACACCTCTGGGTCTGTGGTGTGCCAGT-GGTCTGCAGTGGGGACGCCC-TGTGTCCAGCACTGCTGCTGCTCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914544 169 - 2385121 GCAGAGACTT--A---TCTCCCCATGGCCTCAGTACCGGTCTAGGCCTCTGAGTCATAGATCTAAAAATAAGTCACAGGGCTGTGAGCT-AGCAGGA-CAGCTGC-ACACCTCTGGGTCTATGGTGAGCCAGT-GGTCCACAGTGGGGACGCCC-TGTGTCCAGCACTGCTGCTGCTCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351459 169 + 4274983 GCAGAGACTC--A---TCTCCCCATGGCCTCAGTACTGGCCTAGGCCTCTGAGTCATAGATCTAAAAATAAGTCACAGGGCTGTGAGCT-AGCAGGA-CAGCTGC-ACACCTCTGGGTCTGTGGCGAGCCAGT-GGTCCGCAGTGGGGACGCCC-TGTGCCCAGCACTGCTGCTACTCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583137 168 + 49145316 GCAGAGACTC--C---TCTCCCCATGGCCTCAGTACTGGTCTAGGCCTCTGAGTCATAGATCTAAAAATAAGTCACAGGGCTGTGAGCT-AGCAGGA-CAGCTGC-ACACCTCTGGGTCTGTGGCTAGCCAGC-AGTCTGCAGCAGGGATG-CC-TGTGTTCCACACTGCTACTGCTCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426795 169 + 8899380 GCAGAGACTC--C---TCTCCCCATGGCCTCAGTACTGGTCTAGGCCTCTGAGTCATAGATCTAAAAATAAGTCACAGGGCTGTGAGCT-AGCAGGACCAGCTGC-ACACCTCTGGGTTTGTGGCTAGCCAGC-GGTCTGCAGCCGGGATG-CC-TGTGTCCCACACTGCTACTGCTCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635735 169 - 2680843 GCAGAGACTC--C---TTTCCCCACGGCCTCAGTACTGGTCTAGGCCTCTGAGTCATAGATCTAAAAATAAATCACAGGGCTGTGAGCT-AGCAGGACCAGCTGC-ACACCTCTGGGTCTGTGGCTAGCCAGC-GGTCTGCAGTGGGGACG-CC-TGTGTCCCACACTGCTACTGCTCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383459 168 - 4471408 GCAGAGACTC--C---TCTCCCCATGGCCTCAGTACTGGTCTAGGCCTCTGAGTCATAGATCTAAAAATAAGTCACAGGGCTGTGAGCT-AGCAGGA-CAGCTGC-ACACCTCTGGGTCTGTGGCTAGCCAGC-GGTCTGCAGCAGGGACG-CC-TGTGTCCCACACTGCTACTGCTCC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3977029 167 - 30143674 GCAAAGACTT--C---TCTCCCCAAGGTCTCGGTACTTGTATAGGCCTCTGAGTCACCCATTTAAAAATAGGTCACGGGGCTGTAAGCT-AGCAGCA--GGCTCT-ACACCTCT-GCTCTGTGGCGAGCCAGT-GGTCAGCAGCAGGGAGTCCC-AATGTCCAGCACAGCTACTGCTCC i micMur3.chr22 I 1047 C 0 s proCoq1.NW_012149263v1 591094 167 + 2501019 GCAAAGACTT--C---TCTTCCCAAGGTCTCAGTACTTGTGTAGGCCTCTGAGTCACAGATCTAAAAATAGGTCACAGGGCTGTAAGCT-AGCAGCA--GGCTGC-ACACCTCT-GTTCTGTGGCGAGCCAGT-GGTCAGCAGCAGGGAGTCCC-TATATCCAGCACAGCTACTGCTCC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5494078 145 + 5549422 GCAAAGGCTT--C---TC--CCCAAGGTCTCAG-ACTGGTGTCAGCTTCTGAGTCACAAATCTAAAAATATGTCACAGGGCTGTAAG-T-AGCAGGA-TAGCTGT-ATACCCCTGGTTCTGGGGCTAGCTGGT-GGTCAG---------------------CAGCACAGATACTGATCC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111113727 154 - 145441459 GCGTGAAT------------------GTCTCTGTGCTGGTCCCAGCCTCTGAGTCACAGATCTAAAAATAAACCACAGGGCTGTGACCTAAGCTGTG-TTACTAC-TCTCCTCTGGGTCTAGGGCTAGCCTGT-GGTCAGTAACAGAGAGTCCA-CGA---CAGTACTGCTGCTGCCTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4631339 172 - 122678785 GCAGGGCCTCTTC---TCTCCCCAAGGCCTCGGTCCTGGTTTAGGCCTCTGAGTCACGGATCTAAAAATAAGGCACAAGGCTGTGAGCT-AGCGGGG-CCACTGCTACACCTCCGGTTCCCGGGCTAGCTGGT-GTTCCGCACCAGGGAGTCCC-CATGTCCAGCACTGCTCCTGCTCC i canFam3.chr1 C 0 I 138 s dasNov3.JH563638 364454 172 + 643850 -GACAGGCTT--CCTGTCTCCCCAAGTCTTCAGTGGTGGTCTAGG-CTCTGGGTCACAAACCTAAAAATAAGCCACAGGTCTGTGAGCT-AGCAGGG-CAGCTTC-ACACCTCTGGTTCTGTGGCTAGCCTGTGGGTCAGCAGCAGGGAGTTCCAAATGTCCCACACTGCTGCTACTCC i dasNov3.JH563638 C 0 C 0 a score=16670.000000 s hg38.chr19_GL383574v1_alt 91616 1 + 155864 T s panTro5.chr19 36160175 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905364 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323898 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917422 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230949 1 + 53671032 T i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682891 1 + 59248254 T i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549789 1 - 13342542 T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479469 1 + 7714307 T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286529 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914713 1 - 2385121 T i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351628 1 + 4274983 T i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583305 1 + 49145316 T i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426964 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635904 1 - 2680843 T i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383627 1 - 4471408 T i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3977196 1 - 30143674 T i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 591261 1 + 2501019 T i proCoq1.NW_012149263v1 C 0 I 87 s otoGar3.GL873654 5494223 1 + 5549422 C i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111113881 1 - 145441459 T i mm10.chr7 C 0 C 0 s dasNov3.JH563638 364626 1 + 643850 T i dasNov3.JH563638 C 0 I 98 e canFam3.chr1 4631511 138 - 122678785 I a score=21600.000000 s hg38.chr19_GL383574v1_alt 91617 2 + 155864 -TC s panTro5.chr19 36160176 2 + 61309027 -TC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905365 2 + 64411610 -TC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323899 2 - 8369475 -TC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917423 2 - 106955855 -TC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230950 2 + 53671032 -TC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682892 2 + 59248254 -TC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549790 2 - 13342542 -TC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479470 2 + 7714307 -TC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286530 2 + 50890351 -TC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914714 2 - 2385121 -TC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351629 2 + 4274983 -TC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583306 2 + 49145316 -TC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426965 2 + 8899380 -TC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635905 2 - 2680843 -TC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383628 2 - 4471408 -TC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3977197 2 - 30143674 -TC i micMur3.chr22 C 0 I 98 s otoGar3.GL873654 5494224 2 + 5549422 -TC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111113882 2 - 145441459 -TG i mm10.chr7 C 0 C 0 s dasNov3.JH563638 364725 2 + 643850 GT- i dasNov3.JH563638 I 98 C 0 e proCoq1.NW_012149263v1 591262 87 + 2501019 I e canFam3.chr1 4631511 138 - 122678785 I a score=208849.000000 s hg38.chr19_GL383574v1_alt 91619 17 + 155864 GTCTAGAGGCCTTCCTT- s panTro5.chr19 36160178 17 + 61309027 GTCTAGAGGCCTTCCTT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905367 17 + 64411610 GTCTAGAGGCCTTCCTT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323901 17 - 8369475 GTCTAGAGGCCTTCCTT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917425 17 - 106955855 GTCTAGAGGCCTTCCTT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230952 17 + 53671032 GTCTAGAGGTCTTCCTT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682894 17 + 59248254 GTCTAGAGGTCTTCCTT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549792 17 - 13342542 GTCTAGAGGTCTTCCTT- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479472 17 + 7714307 GTCTAGAGGTCTTCCTT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286532 17 + 50890351 GTCTAGAGGTCTTCCTT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914716 17 - 2385121 GTCTAGAGGTCTTCCTT- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351631 17 + 4274983 GTCTAGAGGTCTTCCTT- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583308 17 + 49145316 ATCTAGAGGCCTTCCTT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426967 17 + 8899380 ATCTAGAGGCCTTCCTT- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635907 17 - 2680843 ATCTAGAGGCCTTCCTT- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383630 17 - 4471408 ATCTAGAGGCCTTCCTT- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5494226 16 + 5549422 CTCTAAGGGTC-TCCTT- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111113884 17 - 145441459 CTCTGAGCATTTTCTTT- i mm10.chr7 C 0 I 1266 s dasNov3.JH563638 364727 18 + 643850 GTCTAAAGGCCTTCTTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 591262 87 + 2501019 I e micMur3.chr22 3977199 98 - 30143674 I e canFam3.chr1 4631511 138 - 122678785 I a score=39499.000000 s hg38.chr19_GL383574v1_alt 91636 4 + 155864 GACC s panTro5.chr19 36160195 4 + 61309027 GACC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905384 4 + 64411610 GACC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323918 4 - 8369475 GACC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917442 4 - 106955855 GACC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230969 4 + 53671032 GACA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682911 4 + 59248254 GACA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549809 4 - 13342542 GACA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479489 4 + 7714307 GACA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286549 4 + 50890351 GACA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914733 4 - 2385121 GACA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351648 4 + 4274983 GACA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583325 4 + 49145316 GACA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426984 4 + 8899380 GCCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635924 4 - 2680843 GACA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383647 4 - 4471408 GACA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5494242 4 + 5549422 GATA i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 364745 4 + 643850 GACA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 591262 87 + 2501019 I e micMur3.chr22 3977199 98 - 30143674 I e mm10.chr7 111113901 1266 - 145441459 I e canFam3.chr1 4631511 138 - 122678785 I a score=632559.000000 s hg38.chr19_GL383574v1_alt 91640 56 + 155864 GATAAAGCAAGCAATGCT-GGG-TAGCCCACACC-CCCTATAACTTTGGCCTGGAGGTG s panTro5.chr19 36160199 56 + 61309027 GATAAAGCAAGCAATGCT-GGG-TAGCCCACACC-CCCTATAACTTTGGCCTGGAGGTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905388 56 + 64411610 GATAAAGCAAGCAATGCT-GGG-TAGCCCACACC-CCCTATAACTTTGGCCTGGAGGTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323922 56 - 8369475 GATAAAGCAAGCAATGCT-GGG-TATCCCACACC-CCCTATAACTTTGGCCTGGAGGTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917446 56 - 106955855 GATAAAGCAAGCAATGCT-GGG-TAGCCCACACC-CACTATAACTTTGGCCTGCAGGTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30230973 56 + 53671032 GATAAAGCAAGCAATGCT-GGG-TAGCCCACACC-CACTATGACTTTGGCCTGGAGGTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34682915 56 + 59248254 GATAAAGCAAGCAATGCT-GGG-TAGCCCACACC-CACTATGACTTTGGCCTGGAGGTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549813 56 - 13342542 GATAAAGCAAGCAATGCT-GGG-TAGCCCACACC-CACTATGACTTTGGCCTGGAGGTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479493 56 + 7714307 GATAAAGCAAGCAATGCT-GGG-TAGCCCACACC-CACTATGACTTTGGCCTGGAGGTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286553 56 + 50890351 GATAAAGCAAGCAATGCC-GGG-TAGCCCACACC-CACTATAACTTTGGCCTGGAGGTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914737 56 - 2385121 GATAAAGCAAGCAATGCT-GGG-TAGGCCACACC-CACTATGACTTTGGCCTGGAGGTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351652 56 + 4274983 GATAAAGCAAGCAATGCT-GGG-TAGCCCACACC-CACTATAACTTTGGCCTGGAGGTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583329 56 + 49145316 GAGTAAGCAAGCAATGCT-GGG-CTACCCACATC-CACTATAAGTTCGGCCTGGAGGTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5426988 56 + 8899380 GATTAAGCAAGCAATGCT-GGG-CTACCCACATC-CACTATAAGTTTGGCCTGGAGGTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635928 56 - 2680843 GATTAAGCAAGCAATGCT-GGG-CTACCCACATC-CACTATAAGTTCGGCCTGGAGGTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383651 56 - 4471408 GATTAAGCAAGCAATGCT-GGG-CTACCCACATC-CACTGTAAGTTCGGCCTGGAGGTG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5494246 57 + 5549422 AACGTAGCAAGCTAGGCCAAGG-TAGCCCACACC-TATAGTAACCTCTTCCTGGACATG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4631649 53 - 122678785 GACAAAACAAGAAATGCC-AGG-----CCAGGTCATACTTTAACATGTCCCAGGATGTG i canFam3.chr1 I 138 C 0 s dasNov3.JH563638 364749 57 + 643850 GACAGAGCAAGCAATGTC-AAGCCATCCCACACC-TGCTATAAGTTCTCCTTGCATCTG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 591262 87 + 2501019 I e micMur3.chr22 3977199 98 - 30143674 I e mm10.chr7 111113901 1266 - 145441459 I a score=390997.000000 s hg38.chr19_GL383574v1_alt 91696 28 + 155864 TCCCTGGATCAGATGCCTGTCTGAGTCT s panTro5.chr19 36160255 28 + 61309027 TCCCTGGATCAGATGCCTGTCTGAGTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905444 28 + 64411610 TCCCTGGATCAGATGCCTGTCTGAGTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6323978 28 - 8369475 TCCCTGGATCAGATGCCTGTCTGAGTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917502 28 - 106955855 TCCCTGGATCAGATGCCTGTCTGAGTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231029 28 + 53671032 TCCCTGGATCAGATGCCTGTCTGAGTCT i rheMac8.chr19 C 0 I 1 s macFas5.chr19 34682971 28 + 59248254 TCCCTGGATCAGATGCCTGTCTGAGTCT i macFas5.chr19 C 0 I 1 s macNem1.NW_012011689v1 4549869 28 - 13342542 TCCCTGGATCAGATGCCTGTCTGAGTCT i macNem1.NW_012011689v1 C 0 I 1 s cerAty1.NW_012005268v1 5479549 28 + 7714307 TCCCTGGATCAGATGCCTGTCTGAGTCT i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29286609 28 + 50890351 TCCCTGGATCAGATGCCTGTCTGAGTCT i chlSab2.chr6 C 0 I 1 s manLeu1.NW_012102454v1 914793 28 - 2385121 TCCCTGGATCAGATGCCTGTCTGAGTCT i manLeu1.NW_012102454v1 C 0 I 1 s colAng1.NW_012111697v1 2351708 28 + 4274983 TCCCTGGATCAGATGCCTGTCTGAGTCT i colAng1.NW_012111697v1 C 0 I 1 s calJac3.chr22 28583385 28 + 49145316 TCCCTGGATCAGATGCCTGTCTGAGTCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427044 28 + 8899380 TCCCTGGATCAGATGCCTGTCAGAGTAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1635984 28 - 2680843 TCCCTGAATCAGATGCCTGTCTGGGTCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383707 28 - 4471408 TCCCTGGATCAGATGCCTGTCTGAATCT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5494303 28 + 5549422 ACCTTGAATCACACGCCTCTCTGAATCT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111115167 27 - 145441459 TCTTTGGGTCATTTGCCTCTCCCCATG- i mm10.chr7 I 1266 C 0 s canFam3.chr1 4631702 28 - 122678785 TCCCTGAGTCAGATGCCTCTCTGTTCTT i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 364806 28 + 643850 TCCCTGGATCATATGCCTCTCTCAATTG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 591262 87 + 2501019 I e micMur3.chr22 3977199 98 - 30143674 I a score=244923.000000 s hg38.chr19_GL383574v1_alt 91724 18 + 155864 GGCTTCCAGACTGTCAAT----------------------- s panTro5.chr19 36160283 18 + 61309027 GGCTTCCAGACTGTCAAT----------------------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905472 18 + 64411610 GGCTTCCAGACTGTCAAT----------------------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324006 18 - 8369475 GGCTTCCAGAGTGTCAAT----------------------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917530 18 - 106955855 GGCTTCCAGACTGTCAAT----------------------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231058 18 + 53671032 GGCTTCTAAACTGTCAAT----------------------- i rheMac8.chr19 I 1 C 0 s macFas5.chr19 34683000 18 + 59248254 GGCTTCTAAACTGTCAAT----------------------- i macFas5.chr19 I 1 C 0 s macNem1.NW_012011689v1 4549898 18 - 13342542 GGCTTCTAAACTGTCAAT----------------------- i macNem1.NW_012011689v1 I 1 C 0 s cerAty1.NW_012005268v1 5479578 18 + 7714307 GGCTTCTAAACTGTCAAT----------------------- i cerAty1.NW_012005268v1 I 1 C 0 s chlSab2.chr6 29286638 18 + 50890351 GGCTTCTAGACTGTCAAT----------------------- i chlSab2.chr6 I 1 C 0 s manLeu1.NW_012102454v1 914822 18 - 2385121 GGCTTCTAAACTGTCAAT----------------------- i manLeu1.NW_012102454v1 I 1 C 0 s colAng1.NW_012111697v1 2351737 18 + 4274983 GGCTTCTAGACTGTCAAT----------------------- i colAng1.NW_012111697v1 I 1 C 0 s calJac3.chr22 28583413 18 + 49145316 GGTTTCTAGACTGCCAAT----------------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427072 18 + 8899380 GGTTTCTAGACTGTCAAT----------------------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1636012 18 - 2680843 GGTTTCTAAACTGTCAAT----------------------- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383735 18 - 4471408 GGTTTCTAGACTGTCAAT----------------------- i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 591349 18 + 2501019 GGCCTCCAGACTGTCAAC----------------------- i proCoq1.NW_012149263v1 I 87 I 1 s otoGar3.GL873654 5494331 18 + 5549422 GGTTTCCAGACCGTCAAT----------------------- i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111115194 18 - 145441459 GCCTTCTGGACTGTCACA----------------------- i mm10.chr7 C 0 I 1 s canFam3.chr1 4631731 16 - 122678785 GGTTTCCAGAC--CCAGT----------------------- i canFam3.chr1 I 1 I 1 s dasNov3.JH563638 364834 41 + 643850 GGTTTCCAGACTGACAAGGCAATCTTGTCTCCCTCTTCCCT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3977199 98 - 30143674 I a score=925188.000000 s hg38.chr19_GL383574v1_alt 91742 50 + 155864 GGCTTGCTCTGCAGCTTTCACCAACCCAGGTCACGACTTGTGCTTACAAC s panTro5.chr19 36160301 50 + 61309027 GGCTTGCTCTGCAGCTTTCACCAACCCAGGTCACGACTTGTGCTTACAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905490 50 + 64411610 GGCTTGCTCTGCAGCTTTCACCAACCCAGGTCACGACTTGTGCTTACAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324024 50 - 8369475 GGCTTGCTCTGCAGCTTTCACCAACCCAGGTCACGACTTGTGCTTACAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917548 50 - 106955855 GGCTTGCTCTGCAGCTTTCACCAACCCAGGTCACGACTTGTGTTTACAAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231076 50 + 53671032 GGCTTGCTCTGCAGCTTTCACCAATCCAGGTCACGACTTGTGCTTACAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683018 50 + 59248254 GGCTTGCTCTGCAGCTTTCACCAACCCAGGTCACGACTTGTGCTTACAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549916 50 - 13342542 GGCTTGCTCTGCAGCTTTCACCAACCCAGGTCACGACTTGTGCTTACAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479596 50 + 7714307 GGCTTGCTCTGCAGCTTTCACCAACCCAGGTCACAACTTGTGCTTACAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286656 50 + 50890351 GGCTTGCTCTGCAGCTTTCACCAACCCAGGTCACGACTTGTGCTTACAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914840 50 - 2385121 GGCTTGCTCTGCAGCTTTCACTAACCCAGGTCACGACTTGTGCTTACAAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351755 50 + 4274983 GGCTTGCTCTGCAGCTTTCACCAACCCAGGTCACAACTTGTGCTTACAAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583431 50 + 49145316 GGCTTGCTCTGCAGCCTTCATCAACCCAGGTCACGACTTGTGCTTACAAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427090 50 + 8899380 GGCTTGCTCTGCAGCCTTCATCAACCCAGGTCACGACTTGTGCTTACAAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1636030 50 - 2680843 GGCTTGCTCTGCAGCCTTCTTCAACCCAGGTCACGACTTGTGCTTACAAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383753 50 - 4471408 GGCTTGCTCTGCAGCCTTCATCAACCCAGGTCACGACTTGTGCTTACAAC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3977297 50 - 30143674 GGCTTCCTCTGCAGCTTTCATCAACCCAGGTCACAACTTGTACTTAAAAC i micMur3.chr22 I 98 C 0 s proCoq1.NW_012149263v1 591368 50 + 2501019 GCCTTACTCTGCAGCTTTCATCAACCCAGGCCACAGCTTGTGCTTAAAAC i proCoq1.NW_012149263v1 I 1 C 0 s otoGar3.GL873654 5494350 50 + 5549422 GACTTACTCTGCAACTTCCATCAACTCAGGTCACGACTTATGCTTAAAAC i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111115213 50 - 145441459 GACCTGTTCTGCCGCTTTTGTCAACCCAGAGGATGACTTGTGCCTAAGAT i mm10.chr7 I 1 C 0 s canFam3.chr1 4631748 50 - 122678785 GGTTTGCTCTGCAGCTTTCATCAACCCAGATGATGACTTATGCTCAGAAT i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 364875 50 + 643850 GGCATGCTTTGCAGCTTTCATCAACCCAGGTCACAATTTTTGCTCAGAAC i dasNov3.JH563638 C 0 C 0 a score=15010.000000 s hg38.chr19_GL383574v1_alt 91792 1 + 155864 A s panTro5.chr19 36160351 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905540 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324074 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917598 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231126 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683068 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549966 1 - 13342542 A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479646 1 + 7714307 A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286706 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914890 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351805 1 + 4274983 A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583481 1 + 49145316 A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427140 1 + 8899380 A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1636080 1 - 2680843 A i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383803 1 - 4471408 A i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3977347 1 - 30143674 A i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 591418 1 + 2501019 A i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5494400 1 + 5549422 A i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111115263 1 - 145441459 C i mm10.chr7 C 0 C 0 s dasNov3.JH563638 364925 1 + 643850 A i dasNov3.JH563638 C 0 I 7 e canFam3.chr1 4631798 0 - 122678785 C a score=14275.000000 s hg38.chr19_GL383574v1_alt 91793 1 + 155864 C s panTro5.chr19 36160352 1 + 61309027 C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905541 1 + 64411610 C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324075 1 - 8369475 C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917599 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231127 1 + 53671032 C i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683069 1 + 59248254 C i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549967 1 - 13342542 C i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479647 1 + 7714307 C i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286707 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914891 1 - 2385121 C i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351806 1 + 4274983 C i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583482 1 + 49145316 C i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427141 1 + 8899380 C i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1636081 1 - 2680843 C i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383804 1 - 4471408 C i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3977348 1 - 30143674 C i micMur3.chr22 C 0 I 114 s proCoq1.NW_012149263v1 591419 1 + 2501019 C i proCoq1.NW_012149263v1 C 0 I 112 s otoGar3.GL873654 5494401 1 + 5549422 T i otoGar3.GL873654 C 0 I 2 s mm10.chr7 111115264 1 - 145441459 T i mm10.chr7 C 0 C 0 e dasNov3.JH563638 364926 7 + 643850 I e canFam3.chr1 4631798 0 - 122678785 C a score=24396.000000 s hg38.chr19_GL383574v1_alt 91794 4 + 155864 -CTCT s panTro5.chr19 36160353 4 + 61309027 -CTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905542 4 + 64411610 -CTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324076 4 - 8369475 -CTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917600 4 - 106955855 -CTCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231128 4 + 53671032 -CTCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683070 4 + 59248254 -CTCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549968 4 - 13342542 -CTCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479648 4 + 7714307 -CTCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286708 4 + 50890351 -CTCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914892 4 - 2385121 -CTCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351807 4 + 4274983 -CTCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583483 4 + 49145316 -CCCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427142 4 + 8899380 -CTCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1636082 4 - 2680843 -CTCA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383805 4 - 4471408 -CTCA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5494404 2 + 5549422 -CT-- i otoGar3.GL873654 I 2 I 1862 s mm10.chr7 111115265 4 - 145441459 GCCC- i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 591420 112 + 2501019 I e micMur3.chr22 3977349 114 - 30143674 I e dasNov3.JH563638 364926 7 + 643850 I e canFam3.chr1 4631798 0 - 122678785 C a score=465086.000000 s hg38.chr19_GL383574v1_alt 91798 50 + 155864 TTggccgggcacggtggctcatgcctgtaa--------tcccaacact-tgggaggcct s panTro5.chr19 36160357 50 + 61309027 TTggccgggcacggtggctcatgcctgtaa--------tcccaacact-tgggaggcct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905546 50 + 64411610 TTggccgggcacggtggctcatgcctgtaa--------tcccaacact-tgggaggcct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324080 50 - 8369475 TTggccgggcacggtggcttatgcctgtaa--------tcccaacact-tgggaggcct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917604 50 - 106955855 TTggccaggcacagtggctcacgcctgtaa--------tcccaacact-tgggaggcct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231132 50 + 53671032 TTggccgggcatggtggctcatgcctataa--------tcccaacact-tgggaggctg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683074 50 + 59248254 TTggccgggcatggtggctcatgcctgtaa--------tcccaacact-tgggaggctg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4549972 50 - 13342542 TTggccgggcatggtggctcatgcctgtaa--------tcccaacact-tgggaggctg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479652 50 + 7714307 TTggccgggcatggtggctcatgcctgtaa--------tcccaacact-tgggaggctg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29286712 50 + 50890351 TTggccgggcatggtggctcatgcctgtaa--------tcccaacact-tgggaggctg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914896 50 - 2385121 TTggccgggcatggtggcttatgcctgtaa--------tcccaacact-tgggaggctg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351811 45 + 4274983 TTggccgggc-----ggctcatgcctgtaa--------tcccaacact-tgggaggctg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583487 51 + 49145316 AAggctggatgcagtggctcacacctgtaa--------tcccaacactctgggaggctg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427146 51 + 8899380 TAggctggatgcagtgactcacacctgtaa--------tcccaacactctgggagtctg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1636086 51 - 2680843 TAggccagatgcagtggctcacacctgtaa--------tcccaacactctgggagtccg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383809 51 - 4471408 TAggctggatgcagtggctcacacctgtaa--------tcccaacactctgggaggccg i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111115269 58 - 145441459 AGTgctgggaacagtggtacctgcctgtaatcccctactcccatagct-ggggaggctg i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 591420 112 + 2501019 I e micMur3.chr22 3977349 114 - 30143674 I e dasNov3.JH563638 364926 7 + 643850 I e otoGar3.GL873654 5494406 1862 + 5549422 I e canFam3.chr1 4631798 0 - 122678785 C a score=2378409.000000 s hg38.chr19_GL383574v1_alt 91848 253 + 155864 aggcgggtgg-gtcacttgagg-tcaggagttcaagaccagcctgatcaac--------ctggtgaaatcctgtctctacgaaaaatac----aaaaattagccatgcgtgatcaggtggcacgcacctgtaatcccagctactcgcgag---gctgaggcaggagaatcact-tgaatccaggaggcgga---ggttgcagtgagccgagatcgcaccactgcacgccaggctgggggacagagcaagactccgtctc-----aaaaaa--------------------------------------------------caaacaaac s panTro5.chr19 36160407 253 + 61309027 aggcgggtgg-gtcacttgagg-tcaggagttcaagaccagcctgatcaac--------ctggtgaaatcctgtctctacgaaaaatac----aaaaattagccatgcgtgatcaggtggcacgcacctgtaatcccagctactcgtgag---gctgaggcaggagaatcact-tgaatccaggaggcgga---ggttgcagtgagccgagatcgcaccactgcactccaggctgggggacagagcaagactccgtctc-----aaaaaa--------------------------------------------------caaacaaac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905596 253 + 64411610 aggcgggtgg-gtcacttgagg-tcaggagttcaagaccagcctgatcaac--------ctggtgaaatcctgtctctacgaaaaatac----aaaaattagccatgcgtgatcaggtggcacgcacctgtaatcccagctactcgcgag---gctgaggcaggagaatcact-tgaatccaggaggcgga---ggttgcagtgagccgagatcgcaccactgcactccaggctgggggacagagcaagactccgtctc-----aaaaaa--------------------------------------------------caaacaaac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324130 256 - 8369475 aggcgggtgg-gtcacttgagg-tcaggagttcaagaccagcctgatcaac--------ctggtgaaatcctgtctctacgaaaaatac----aaaaattagccatgcgtgatcaggtggcacgcacctgtaatcccagctactcgcgaggctgctgaggcaggagaatcact-tgaatccaggaggcgga---ggttgcagtgagccgagattgcaccactgcactccaggctgggggacagagcaagactccgtctc-----aaaaaa--------------------------------------------------caaacaaac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917654 253 - 106955855 aggcgggtgg-gtcacttgagg-tcaggagttcaagaccagcctgatcaac--------ctggtgaaatcctgtctctacgaaaaatac----aaaaattagccacgcgtgatcaggtggcacgcacctgtaatcccagctactcgcaag---gctgaggcaggagaatcact-tgaatccaggaggcgga---ggttgcagtgagccgagatcacaccactacactccagcctgggcgacagagcaagactctgtctc-----aaaaaa--------------------------------------------------caaacaaac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231182 248 + 53671032 aggtgggtgg-gtcacttgagg-tcaggagttcgagaccagcctgatcaac--------ctggtgaaatcctgtctctacgaaaaatac----aaaaattagccaggcgt-----ggtggcacacgcctgtcatgccagctatttgggag---gctgagacaggagaatcact-tgaatccgggaggcaga---ggttgcagtgagctgagatcgcaccactgcactccagcctaggcgacagagcaagactccatctc-----aaaaaa--------------------------------------------------caaacaaac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683124 248 + 59248254 aggtgggtgg-gtcacttgagg-tcaggagttcgagaccagcctgatcaac--------ctggtgaaatcctgtctctacgaaaaatac----aaaaattagccaggcgt-----ggtggcacacgcctgtcatgccagctatttgggag---gctgagacaggagaatcact-tgaatccgggaggcaga---ggttgcagtgagctgagatcgcaccactgcactccagcctaggcgacagagcaagactccatctc-----aaaaaa--------------------------------------------------caaacaaac i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550022 248 - 13342542 aggtgggtgg-gtcacttgagg-tcaggagttcgagaccagcctgatcaac--------ctggtgaaatcctgtctctacgaaaaatac----aaaaattagccaggcgt-----ggtggcacacgcctgtcatgccagctatttgggag---gctgagacaggagaatcact-tgaatccgggaggcaga---ggttgcagtgagctgagatcgcaccactgcactccagcctaggcgacagagcaagactccatctc-----aaaaaa--------------------------------------------------caaacaaac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5479702 225 + 7714307 -------------------------aggagttcgagaccagcctgatcaac--------ctggtgaaatcctgtctctacgaaaaatac----aaaaattagccaggcgt-----ggtggcacacgcctgtcatgccagctatttgggag---gctgagacaggagaatcact-tgaatccgggaggcaga---ggttgcagtgagctgagatcgcaccactgcactccagcctaggcgacagagcaagactccatctc-----aaaaaa--------------------------------------------------caaacaaaC i cerAty1.NW_012005268v1 C 0 I 305 s chlSab2.chr6 29286762 248 + 50890351 aggtgggtgg-gtcacttgagg-tcaggagttcgagaccagcctgatcaac--------ctggtgaaatcctgtctctacgaaaaatac----aaaaattagccaggcgt-----ggtggcacacgcctgtcatgccagctatttgggag---gctgagacaggagaatcact-tgaattcgggaggcaga---ggttgcagtgagctgagatcgcaccactgcactccagcctaggcgacagagcaagactccatctc-----aaaaaa--------------------------------------------------caaacaaac i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 914946 248 - 2385121 aggtgggtgg-gtcacttgagg-tcaggagttcgagaccagcctgatcaac--------ctggtgaaatcctgtctctacgaaaaatac----aaaaattagccaggcgt-----ggtggcacacgcctgtcatgccagctatttgggag---gctgagacaggagaatcact-tgaatccgggaggcaga---ggttgcagtgagctgagatcgcaccactacactccagcctaggcgacagagcaagactccatctc-----aaaaaa--------------------------------------------------caaacaaac i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2351856 248 + 4274983 aggtgggtgg-gtcacttgagg-tcaggagttcgagaccagcctgatcaac--------ctggtgaaatcctgtgtctacaaaaaatac----aaaaattagtcaggcgt-----ggtggcacacacctgtaatgccagctatctgggag---actgagacaggagaatcact-tgaatccgggaggcaga---ggttgcagtgagctgaaatcgcaccactgtactccagcctaggcgacagagcaagactccgtctc-----aaaaaa--------------------------------------------------caaacaaac i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583538 247 + 49145316 aggcaggggg-atcacttgagg-tcaggagtttgagaccatccaggccaac--------atagcgaaatcctgtctctacaaaaaatac----aataattagccaagcat-----ggtggt-cacgcctgtaatcccagctacttgggag---gctgagacagaagaatcact-tgaacccaggaggcgag---ggttgtagtgacccgagatcgcaccactgcattacagcctgtgtgacagagcaagactccgtctc-----agaaaa--------------------------------------------------caaacaaac i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427197 246 + 8899380 a-gcgggggt-atcacttgagg-tcaggagtttgagaccagccaggccaac--------atagtgaaatcctgtctctacaaaaaatac----aataattagccgggcat-----ggtggcgtgcacctgtagt-ccagctacatgagag---gttgaggcaggagaattgct-tgaacccagcaggcaaa---ggttgcagtgagccaagtttgcaccactgtactccagcctgggtgacagaccgagactccatctc-----aaTCAA--------------------------------------------------TCAATCAAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1636137 247 - 2680843 a-ggtggggg-atcacttgagg-tcaggagtttgagaccagccaggccaac--------ataatgaaatcctgtctctacaaaaaatac----aataattagccaggcat-----ggtgggacaggcctgtaatcccagctacttgggag---gctgagacagaagaatcact-tgaacccaggaggctag---ggttgcagtgacctgagatcacaccactgcactccagcctgtgtgacagagcaagattccgtctc-----aaaaaa--------------------------------------------------caaacaaaC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 383860 248 - 4471408 aggcgggggg-atcacttgagg-tcaggagtttgagaccagccagtccaac--------atagcgaaatcctgtctctacagaaagtac----aataattagccaggcgt-----ggtgggacatgcctgtaatcccagctacttgagag---gctgagacagaagaatcact-tgaacccaggaggcaag---ggttgcagtgacccgagatcgcaccactgcactccagcctgtgtgacagagcaagactccgtctc-----aaaaaa--------------------------------------------------caaacaaac i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5496268 259 + 5549422 AGGCAGGgggtggcgcctgtgtctcagtaggtagggcacatcccatttaccgagggtggctggttcaaacctggccctggccaaactgcaacaaaaaaatagcctggtgt-----tgaggcgggtgcctgtagtcccagctactcaggag---gctgagacaggagaatcagc-taagcccaggagttgga---ggttactgtgagctgtgat---gccatggtactctaccgagggtgataaagtgagacactgtctctatttaaaaaa--------------------------------------------------gaaa----- i otoGar3.GL873654 I 1862 C 0 s mm10.chr7 111115327 249 - 145441459 ----aggtag-g------aaga-tggcaagtttgaagccagtctCA--GAC--------TTGATGGGGTCTTG----------GAACGC----Aga-------------t-----ggtgatgcacacctttaatcctagcgtgagggcag---gcagatgtagctggatctctgtgagttt--gaggccagtctggtagtaatagtcccgga----------------cacccagggctatgtagagagactttgtctc-----aaaataaGTGAGtaaataaatatataagtatatttaaaaaGAATCTGTTGTAGACCAAAACAAAC i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 591420 112 + 2501019 I e micMur3.chr22 3977349 114 - 30143674 I e dasNov3.JH563638 364926 7 + 643850 I e canFam3.chr1 4631798 0 - 122678785 C a score=10028.000000 s hg38.chr19_GL383574v1_alt 92101 1 + 155864 a s panTro5.chr19 36160660 1 + 61309027 a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905849 1 + 64411610 a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324386 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917907 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231430 1 + 53671032 a i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683372 1 + 59248254 a i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550270 1 - 13342542 a i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480232 1 + 7714307 a i cerAty1.NW_012005268v1 I 305 C 0 s chlSab2.chr6 29287010 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915194 1 - 2385121 a i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352104 1 + 4274983 a i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583785 1 + 49145316 a i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427443 1 + 8899380 A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1636384 1 - 2680843 A i cebCap1.NW_016107633v1 C 0 I 1831 s aotNan1.NW_018505377v1 384108 1 - 4471408 a i aotNan1.NW_018505377v1 C 0 I 4 s otoGar3.GL873654 5496527 1 + 5549422 g i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111115576 1 - 145441459 G i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 591420 112 + 2501019 I e micMur3.chr22 3977349 114 - 30143674 I e dasNov3.JH563638 364926 7 + 643850 I e canFam3.chr1 4631798 0 - 122678785 C a score=18240.000000 s hg38.chr19_GL383574v1_alt 92102 2 + 155864 --------aa s panTro5.chr19 36160661 2 + 61309027 --------aa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905850 2 + 64411610 --------aa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324387 2 - 8369475 --------aa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917908 2 - 106955855 --------aa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231431 2 + 53671032 --------aa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683373 2 + 59248254 --------aa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550271 2 - 13342542 --------aa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480233 2 + 7714307 --------aa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287011 2 + 50890351 --------aa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915195 2 - 2385121 --------aa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352105 2 + 4274983 --------aa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583786 2 + 49145316 --------aa i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 384113 2 - 4471408 --------aa i aotNan1.NW_018505377v1 I 4 C 0 s otoGar3.GL873654 5496528 2 + 5549422 --------aa i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111115577 10 - 145441459 AATCATTCAA i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 591420 112 + 2501019 I e micMur3.chr22 3977349 114 - 30143674 I e dasNov3.JH563638 364926 7 + 643850 I e canFam3.chr1 4631798 0 - 122678785 C e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=116664.000000 s hg38.chr19_GL383574v1_alt 92104 13 + 155864 aC---ACCTCATGTCT s panTro5.chr19 36160663 13 + 61309027 aC---ACCTCGTGTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905852 13 + 64411610 aC---ACCTCGTGTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324389 13 - 8369475 aC---ACCTCGTGTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917910 13 - 106955855 aC---ACCTCGTGTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231433 13 + 53671032 aC---ACCTTGTGTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683375 13 + 59248254 aC---ACCTTGTGTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550273 13 - 13342542 aC---ACCTTGTGTCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480235 13 + 7714307 aC---ACCTTGTGTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287013 13 + 50890351 aC---ACCTTGTGTCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915197 13 - 2385121 aC---ACCTTGTGTCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352107 13 + 4274983 aC---CCCTTGTGTCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583788 13 + 49145316 aC---ACCTCGTATCT i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 384115 13 - 4471408 aC---ACCTCGTGTCT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5496530 13 + 5549422 aa---aTCTGATGCGT i otoGar3.GL873654 C 0 I 358 s mm10.chr7 111115587 16 - 145441459 ACCGTCCCTGGTGTCT i mm10.chr7 C 0 C 0 s canFam3.chr1 4631798 13 - 122678785 AT---ACCTAGTGTCT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 591420 112 + 2501019 I e micMur3.chr22 3977349 114 - 30143674 I e dasNov3.JH563638 364926 7 + 643850 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=107607.000000 s hg38.chr19_GL383574v1_alt 92117 12 + 155864 GGGCCAGCCTGC s panTro5.chr19 36160676 12 + 61309027 GGGCCAGCCTGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905865 12 + 64411610 GGGCCAGTCTGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324402 12 - 8369475 GGGCCAGCCTAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917923 12 - 106955855 GGGCCAGCCTGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231446 12 + 53671032 GGGCCAGCCTGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683388 12 + 59248254 GGGCCAGCCTGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550286 12 - 13342542 GGGCCAGCCTGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480248 12 + 7714307 GGGCCAGCCTGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287026 12 + 50890351 GGGCCAGCCTGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915210 12 - 2385121 GGGCCAGCCTGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352120 12 + 4274983 GGGCCAGCCTGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583801 12 + 49145316 GGGTCAGCCTGC i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 384128 12 - 4471408 GGGCCAGCCTAC i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111115603 11 - 145441459 AGACCAGTTTA- i mm10.chr7 C 0 C 0 s canFam3.chr1 4631811 12 - 122678785 GGGTCGGCTTAC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 591420 112 + 2501019 I e micMur3.chr22 3977349 114 - 30143674 I e dasNov3.JH563638 364926 7 + 643850 I e otoGar3.GL873654 5496543 358 + 5549422 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=133686.000000 s hg38.chr19_GL383574v1_alt 92129 14 + 155864 TTTCCTCCTCTTTT s panTro5.chr19 36160688 14 + 61309027 TTTCCTCCTCTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905877 14 + 64411610 TTTCCTCCTCTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324414 14 - 8369475 TTTCCTCCTCTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917935 14 - 106955855 TTTCCTCCTCTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231458 14 + 53671032 TTTCCTCCTCTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683400 14 + 59248254 TTTCCTCCTCTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550298 14 - 13342542 TTTCCTCCTCTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480260 14 + 7714307 TTTCCTCCTCTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287038 14 + 50890351 TTTCCCCCTCTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915222 14 - 2385121 TTTCCTCCTCTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352132 14 + 4274983 TTTCCTCCTCTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583813 14 + 49145316 TTTCCTCCTCTTTT i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 384140 14 - 4471408 TTTCCTTCTCTttt i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111115614 11 - 145441459 TTTCCTCTTCC--- i mm10.chr7 C 0 C 0 s canFam3.chr1 4631823 11 - 122678785 TTCTCTCTTCC--- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 364933 14 + 643850 TTTTCTCTTCTTCC i dasNov3.JH563638 I 7 C 0 e proCoq1.NW_012149263v1 591420 112 + 2501019 I e micMur3.chr22 3977349 114 - 30143674 I e otoGar3.GL873654 5496543 358 + 5549422 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=165566.000000 s hg38.chr19_GL383574v1_alt 92143 15 + 155864 AGCTGGTACTTGGTT s panTro5.chr19 36160702 15 + 61309027 AGCTGGTACTTGGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905891 15 + 64411610 AGCTGGTACTTGGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324428 15 - 8369475 AGCTGGTACTTGGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917949 15 - 106955855 AGCTGGTACTTGGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231472 15 + 53671032 AGCTGGTACTTGGTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683414 15 + 59248254 AGCTGGTACTTGGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550312 15 - 13342542 AGCTGGTACTTGGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480274 15 + 7714307 AGCTGGTACTTGGTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287052 15 + 50890351 AGCTGGTTCTTGGTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915236 15 - 2385121 AGCTGGTACTTGGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352146 15 + 4274983 AGCTAGTACTTGGTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28583827 15 + 49145316 AGCTGCCACTTGGTT i calJac3.chr22 C 0 I 316 s aotNan1.NW_018505377v1 384154 15 - 4471408 agctgccacttggtt i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3977463 15 - 30143674 AGCTGCTACTTTGTT i micMur3.chr22 I 114 C 0 s proCoq1.NW_012149263v1 591532 15 + 2501019 AGCTGCTACTTTGTT i proCoq1.NW_012149263v1 I 112 C 0 s mm10.chr7 111115625 15 - 145441459 AGCTATGACCTGCTT i mm10.chr7 C 0 C 0 s canFam3.chr1 4631834 15 - 122678785 AGCTGCTACTTGGTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 364947 3 + 643850 AGC------------ i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5496543 358 + 5549422 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=13923.000000 s hg38.chr19_GL383574v1_alt 92158 1 + 155864 T s panTro5.chr19 36160717 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905906 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324443 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917964 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231487 1 + 53671032 T i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683429 1 + 59248254 T i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550327 1 - 13342542 T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480289 1 + 7714307 T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287067 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915251 1 - 2385121 T i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352161 1 + 4274983 T i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28584158 1 + 49145316 t i calJac3.chr22 I 316 C 0 s aotNan1.NW_018505377v1 384169 1 - 4471408 t i aotNan1.NW_018505377v1 C 0 I 330 s micMur3.chr22 3977478 1 - 30143674 T i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 591547 1 + 2501019 T i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111115640 1 - 145441459 T i mm10.chr7 C 0 C 0 s canFam3.chr1 4631849 1 - 122678785 T i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 364950 0 + 643850 C e otoGar3.GL873654 5496543 358 + 5549422 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=451517.000000 s hg38.chr19_GL383574v1_alt 92159 37 + 155864 AAATCTGGAAATCCTGGAGTCTTTGGAATTCCATTGA s panTro5.chr19 36160718 37 + 61309027 AAATCTGGAAATCCTGGAGTCTTTGGAACTCCATTGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905907 37 + 64411610 AAATCTGGAAATCCTGGAGTCTTTGGAACTCCATTGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324444 37 - 8369475 AAATCTGGAAATCCTGGAGTCTTTGGAACTCCGTTGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63917965 37 - 106955855 AAATCTGGAAATTCTGGAGTCTTTGGAATTCCATTGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231488 37 + 53671032 AAATCTGGAAATCCTGGAGTCTTTGGAACTTCATTGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683430 37 + 59248254 AAATCTGGAAATCCTGGAGTCTTTGGAACTTCATTGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550328 37 - 13342542 AAATCTGGAAATCCTGGAGTCTTTGGAACTTCATTGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480290 37 + 7714307 AAATCTGGAAATCCTGGAGTCTTGGGAACTTCATTGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287068 37 + 50890351 AAATCTGGAAATCCTGGAGTCTTTGGAACTTCATTGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915252 37 - 2385121 AAATCTGGAAATCCTGGAGTCTTTGGAGCTTCATTGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352162 37 + 4274983 AAATCTGGAAATCCCGGAGTCTTTGGAACTTCATTGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28584159 37 + 49145316 aaaCCTGGAAATCCTGGAGTCTTCGGAACTCCATTGA i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 384500 37 - 4471408 aaacctggaaatcctggagtcttcggaactccattga i aotNan1.NW_018505377v1 I 330 C 0 s micMur3.chr22 3977479 37 - 30143674 AAATCTGGAAACCCTGCAGTCTTCAGACCTCCACTGA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 591548 37 + 2501019 AAATCTGGAAACCCTGGAGTCTTCAGGCCTCCACTGA i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111115641 31 - 145441459 CAACCTGGAAA--CTGGACTCTTCA----CCAGCCGA i mm10.chr7 C 0 C 0 s canFam3.chr1 4631850 37 - 122678785 AAATCTGGAAATCCTGGAGACCTCAGACTTCCATGGA i canFam3.chr1 C 0 I 214 s dasNov3.JH563638 364950 37 + 643850 AAATCCGGAAGTCCTGGAGTCTTCAGGCCTCCCCTGA i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5496543 358 + 5549422 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=270907.000000 s hg38.chr19_GL383574v1_alt 92196 28 + 155864 CCTGAGCTGGGTTACTG---TCCTGGTGTCT s panTro5.chr19 36160755 28 + 61309027 CCTGAGCTGGGTTACTG---TCCTGGTGTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905944 28 + 64411610 CCTGAGCTGGGTTACTG---TCCTGGTGTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324481 28 - 8369475 CCTGAGTTGGGTTACTG---TCCTGGTGTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918002 28 - 106955855 CCTGAGATGGGTTACTG---TAATGCTGTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231525 28 + 53671032 TTTGAGATGGGTTACTG---TCCTGGTATCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683467 28 + 59248254 TTTGAGATGGGTTACTG---TCCTGGTATCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550365 28 - 13342542 TTTGAGATGGGTTACTG---TCCTGGTATCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480327 28 + 7714307 TTTGAGATGGGTTACTG---TCCTGGTATCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287105 28 + 50890351 TTTGAGATGGGTTACTA---TCCTGGTATCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915289 28 - 2385121 TTTGAGATGGGTTACCG---TCCTGGTATCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352199 28 + 4274983 TTTGAGATGGGTTACTG---TCCTGGTATCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28584196 27 + 49145316 CCTCAGATGGGTTAGTC---TCCTGGTGTC- i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 384537 27 - 4471408 CCTGAGATGGGTTAGTC---TCCTGGTGTC- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3977516 28 - 30143674 GCCGAGATAGGCCACTG---TCCCAGTGTCT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 591585 28 + 2501019 GCTGAGATAGGCCACTG---TCCTGGTGTCT i proCoq1.NW_012149263v1 C 0 I 167 s mm10.chr7 111115672 31 - 145441459 GTTGAGGTCGGTCACCAAGCCCATGATGTCT i mm10.chr7 C 0 C 0 s canFam3.chr1 4632101 28 - 122678785 ACAGAGATAGGCCACTG---CCCTGATGTCC i canFam3.chr1 I 214 C 0 s dasNov3.JH563638 364987 28 + 643850 GCTAAAATGGGCCACTG---TCCTGATGGTT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5496543 358 + 5549422 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=113305.000000 s hg38.chr19_GL383574v1_alt 92224 11 + 155864 GTCTCTAGCAC s panTro5.chr19 36160783 11 + 61309027 TTCTCTAGCAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905972 11 + 64411610 TTCTCTAGCAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324509 11 - 8369475 GTCTCTAGCAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918030 11 - 106955855 CTCTCTAGTAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231553 11 + 53671032 CTCCCTAGCAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683495 11 + 59248254 CTCTCTAGCAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550393 11 - 13342542 CTCTCTAGCAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480355 11 + 7714307 CTCTCTAGCAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287133 11 + 50890351 CTCTCTAGCAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915317 11 - 2385121 CTCTCTAGCAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352227 11 + 4274983 CTCTCTAGCAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28584223 10 + 49145316 -TCTCTAGCAC i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 384564 10 - 4471408 -TCTCTAGCAC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3977544 11 - 30143674 CTCTCTAGCAC i micMur3.chr22 C 0 I 1025 s mm10.chr7 111115703 11 - 145441459 GTCTCTAGCAC i mm10.chr7 C 0 C 0 s canFam3.chr1 4632129 10 - 122678785 TTCCGTAACA- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 365015 11 + 643850 GTCCCTAGCAC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 591613 167 + 2501019 I e otoGar3.GL873654 5496543 358 + 5549422 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=1530417.000000 s hg38.chr19_GL383574v1_alt 92235 191 + 155864 GGTTGGAAGGTAACTG---------TTCTTATGAAT-------GGAAAGGAGGTGTTGGTGTCAGATGTGTTTA-TAGTTGCATTATCTCAACTTGAACTTCGTCTTGTTCTCACCTAACTTGAGGAAGCAAGGAAATTTGGAATTCAAATATTCTAATAATATTTGTTATTAAGTGAGGACATTCAAATCA---TACATTCAAATATTAG s panTro5.chr19 36160794 191 + 61309027 GGTTGGAAGGTAACTG---------TTCTTATGAAT-------GGAAAGGAGGTGTTGGTGTCAGATGTGTTTA-TAGTTGCATTATCTCAACTTGAACTTCGTCTTGTTCTCACCTAACTTGAGGAAGCAAGGAAATTTGGAATTCAAATATTCTAATAATATTTGTTATTAAGTGAGGACATTCAAATCA---TACATTCAAATATTAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39905983 191 + 64411610 GGTTGGAAGGTAACTG---------TTCTTATGAAT-------GGAAAGGAGGTGTTGGTGTCAGATGTGTTTA-TAGTTGCATTATCTCAACTTGAACTTCGTCTTGTTCTCACCTAACTTGAGGAAGCAAGGAAATTTGGAATTCAAATATTCTAATAATATTTGTTATTAAGTGAGGACATTCAAATCA---TACATTCAAATATTAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324520 191 - 8369475 GGTTGGAAGGTAACTG---------TTCTTATGAAT-------GGAAAGGAGGTGTTGGTGTCAGATGTGTTTA-TAGTTGCATTATCTCAACTTGAACTTCGTCTTGTTCTCACCTAACTTGAGGAAGCAAGGAAATTTGGAATTCAAATATTCTAATAATATTTGTTATTAAGTGAGGACATTCAAATCT---TACATTCAAATATTAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918041 190 - 106955855 GGTTGGAAGGTAGCTG---------TTCTTACAAAA-------GGAAAGGAGGTGTCGGTGTCAGATGTGTTTA-TAGTTGCATTATCTCAACGTGAACTTCGCCTTGTTCTCACCTAACTTGAGGAAGCAAGGAAATTTGGAATTAAAATATTCTAATAATATTTGTTAT----TGAGGACATTCAAATAATATTACATTCAAATATTAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231564 190 + 53671032 GGTTGGAAGGTAGCTG---------TTCTTATGAAT-------GGAAAGGAGGTGCTGGTGTCAGATGTGTTTA-TAGTTGCATTATCTCAACTTGAACTTCGCCTTGTTCTCACCTAACTTGAGGAAGCAAGGAAATTTGGAATTTGAATATTCTAATAATATTTGTTAT----TGAGGACATTCAAATAATATTATATTCAAATATTAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683506 190 + 59248254 GGTTGGAAGGTAGCTG---------TTCTTATGAAT-------GGAAAGGAGGTGCTGGTGTCAGATGTGTTTA-TAGTTGCATTATCTCAACTTGAACTTCGCCTTGTTCTCACCTAACTTGAGGAAGCAAGGAAATTTGGAATTTGAATAGTCTAATAATATTTGTTAT----TGAGGACATTCAAATAATATTATATTCAAATATTAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550404 190 - 13342542 GGTTGGAAGGTAGCTG---------TTCTTATGAAT-------GGAAAGGAGGTGCTGGTGTCAGATGTGTTTA-TAGTTGCATTATCTCAACTTGAACTTTGCCTTGTTCTCACCTAACTTGAGGAAGCAAGGAAATTTGGAATTTGAATATTCTAATAATATTTGTTAT----TGAGGACATTCAAATAATATTATATTCAAATATTAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480366 194 + 7714307 GGTTAGAAGGTAGCTG---------TTCTTACGAAT-------GGAAAGGAGGTGCTGGTGTCAGATGTGTTTA-TAGTTGCATTATCTCAACTTGAACTTCGCCTTGTTCTCACCTAACTTGAGGAAGCAAGGAAATTTGGAATTTGAATATTCTAATAATATTTGTTATTAAGTGAGGACATTCAAATAATATTATATTCAAATATTAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287144 194 + 50890351 GGTTGGAAGGTAGCTG---------TTCTTACGAAT-------GGAAAGGAGGTGCTGGTGTCAGATGTGTTTA-TAGTTGCATTATCTCAACTTGAACTTTGCCTTGTTCTCACCTAACTTGAGGAAGCAAGGAAATTTGGAATTTGAATATTCTAATAATACTTGTTATTAAGTGAGGACATTCAAATAATATTATATTCAAATATTAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915328 194 - 2385121 AGTTGGAAGGTAGCTG---------TTCTTACGAAT-------GGAAAGGAGGGGCTGGTGTCAGATGTGTTTA-TAGTTGCATTATCTCAACTTGAACTTCGCCTTGTTCTCACCTAACTTGAGGAAGCAAGGAAATGTGGAATTTGAATATTCTAATAATATTTGTTATTAAGTGAGGACATTCAAATAATATTATATTCAAATATTAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352238 194 + 4274983 GGTTGGAAGGTAGCTG---------TTCTTACGAAT-------GGAAAGGAGGTGCTGCTGTCACATGTGTTTA-CAGTTGCATTATCTCAACTTGAACTTCGCCTTGTTCTCACCTAACTTGAGGAAGCAAGGAAATTTGGAATTTGAATATTCTAATCATAATTGTTATTAAGTGAGGACATTCAAATAGTATTATATTCAAATATTAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28584233 188 + 49145316 AGTCTGAAGGTAGTTG---------TTCTTACGGAT-------GGAAAGGAGG------TGTCAGATGCGTTTA-TGGTTGCATTATCTCAACTTGAACTTTGACTTGTTCTCACCTAACTTGAGGAAGCAAGGACATTTGGAATTCAAACATTCTAATAATATTTGTTACTAAGTGAGGACATTCAAATAATATTACCTTCAAATATTAG i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 384574 187 - 4471408 AGTCTGAAGGTAGCTG---------TTCTTAGGAAT-------GGAAAGGAGG------TGTCAGATGTGTTTA-TGGTTGCATTATCTCAACTTGAACTTTGACTTGTTCTCACCTAACTTGAGGAAGCAAGGACATTTGGAATTCAAACATTGTAATAATATTTGTTACTAAGTGAGGACATTCAAA-AATATTACCTTCAAATATTAG i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111115714 152 - 145441459 AGTCAGAGAGCTGCTG---------TCCCTCCTGCTCTTGCCAGGAAGGGAAGTACC--TCCCAGACACATCTG-CTGCTGACTTATCCCAACTTGAACTT-GCCTTATGCTCACCTAACTGAAGGAGGGATGGAAATTTAGAA-GCAAATATT-------------------GATGGGTACAAC-------------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4632139 141 - 122678785 -GTCAGAGGATGGCTGCTTTTTCTTTTCCCAGGAAT-------GAAAGGGACC------TGTCAGACATGCTCATTTTTTGCATTATCCCAACTTGAACTT-ACCTTGTTTTCACTTA-----AGGAGGCAGGGAGGTATAGAA-CCAAATATTAGCACAAG------------------------------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 365026 140 + 643850 AGTTAGAAGATAGCTGCTTTTGCTTTTCCCAGGAAT-------GCAAAAGAAA------TGTCAGGCATATTTA-GTGTTGGATTATCCCAACCTGAACTT-GCCTTGCTCTCACCTTACTCAAGGAAGAAGGGAAGCATAGAA--------------------------------------------------------CCAAATATTAG i dasNov3.JH563638 C 0 I 4 e proCoq1.NW_012149263v1 591613 167 + 2501019 I e micMur3.chr22 3977555 1025 - 30143674 I e otoGar3.GL873654 5496543 358 + 5549422 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=13923.000000 s hg38.chr19_GL383574v1_alt 92426 1 + 155864 T s panTro5.chr19 36160985 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906174 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324711 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918231 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231754 1 + 53671032 T i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683696 1 + 59248254 T i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550594 1 - 13342542 T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480560 1 + 7714307 T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287338 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915522 1 - 2385121 T i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352432 1 + 4274983 T i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28584421 1 + 49145316 T i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 384761 1 - 4471408 T i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3978580 1 - 30143674 T i micMur3.chr22 I 1025 C 0 s mm10.chr7 111115866 1 - 145441459 T i mm10.chr7 C 0 C 0 s canFam3.chr1 4632280 1 - 122678785 T i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 365170 1 + 643850 T i dasNov3.JH563638 I 4 C 0 e proCoq1.NW_012149263v1 591613 167 + 2501019 I e otoGar3.GL873654 5496543 358 + 5549422 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=622704.000000 s hg38.chr19_GL383574v1_alt 92427 48 + 155864 AATGTCTGTTACAGCAAACTACCAGAAAAGGACAGCAAGCTACAGATG s panTro5.chr19 36160986 48 + 61309027 AATGTCTGTTACAGCAAACTACCAGAAAAGGACAGCAAGCTACAGATG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906175 48 + 64411610 AATGTCTGTTACAGCAAACTACCAGAAAAGGACAGCAAGCTACAGATG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324712 48 - 8369475 AATGTCTGTTACAGCAAACTACCAGAAAAGGACAGCAAGCTACAGATG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918232 48 - 106955855 AATGTCTATTACAGCAAACTACCAGAAAAGGACAGCAAACTACAGATG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231755 48 + 53671032 AATGTCTGTTACAGCAAACTACCAGAAAAGGACAGTAAGCTACAGATG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683697 48 + 59248254 AATGTCTGTTACAGCAAACTACCAGAAAAGGACAGTAAGCTACAGATG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550595 48 - 13342542 AATGTCTGTTACAGCAAACTACCAGAAAAGGACAGTAAGCTACAGATG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480561 48 + 7714307 AATGTCTGTTACAGCAAACTACCAGAAAAGGACAGTAAGCTACAGATG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287339 48 + 50890351 AATGTCTGTTACAGCAAACTACCAGAAAAGGACAGTAACCTACAGATG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915523 48 - 2385121 AATGTCTGTTACAGCAAACTACCAGAAAAGGACAGTAAGCTACAGATG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352433 48 + 4274983 AATGTCTGTTACAGCAAACTACCAGAAAAGGACAGTAAGCTGCAGATG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28584422 48 + 49145316 AATGTCTGTTACACCAAACTACCAGAAAAGGACAGCAAGCTACAGATG i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 384762 48 - 4471408 AATGTCTGTTACAGCAAACTACCAGAAAAGGACAGCAAGCTACAGATG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3978581 48 - 30143674 AATGTCTGTTACAGTCACCTACCAGAAAAAGACAGCTTGCTACAGATA i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5496901 48 + 5549422 AATATCTGTTACAGCCAACTACCAGCAAAGGACAGCCAGCTGCAGATA i otoGar3.GL873654 I 358 I 1 s mm10.chr7 111115867 46 - 145441459 AAGGTCTGCCACAGCCAACTTCTGG-GAAGGACAGCCAGCTTGAGAG- i mm10.chr7 C 0 C 0 s canFam3.chr1 4632281 48 - 122678785 AACGTCTGTCACAGCCAACTACCAGAAAAGGACAGCCAGCTACAGATG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 365171 48 + 643850 AATGTGTGTCACAGCCAACTCCCAGAAAAGGTCAACAAAATAAAGATG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 591613 167 + 2501019 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=634932.000000 s hg38.chr19_GL383574v1_alt 92475 47 + 155864 ACCTGGCAATGATGAGCCCATAGGGACTGTTAGTGGGAAGGCTGACA s panTro5.chr19 36161034 47 + 61309027 ACCTGGCAATGATGAGCCCATAGGGACTGTTGGTGGGAAGGCTGACA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906223 47 + 64411610 ACCTGGCAATGATGAGCCCATAGGGACTGTTGGTGGGAAGGCTGACA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324760 47 - 8369475 ACCTGGCAATGATGAGCCCATAGGGACTGTTGGTGGGAAGGCCGACA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918280 47 - 106955855 AGCTGGCAACGATGAGCCCACAGGGACTGTTGGTGGGAAGGCTGACA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231803 47 + 53671032 ACCTGGCAATGATGAGCCCATAGGGACTGCTGGTGGGAAGGCTGACG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683745 47 + 59248254 ACCTGGCAATGATGAGCCCATAGGGACTGCTGGTGGGAAGGCTGATG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550643 47 - 13342542 ACCTGGCAATGATGAGCCCATAGGGACTGCTGTCGGGAAGGCTGATG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480609 47 + 7714307 ACCCTGCAATGATGAGCCCATAGGGACTGCTGGTGGGAAGGCTGACG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287387 47 + 50890351 ACCTGGCAATGATGAGCCCATAGGGACTGTTGGTGGGAAGGCTGACG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915571 47 - 2385121 ACCTGGCAATGATGAGCCCATAGGGACTGCTGGTGGGAAGGCTGACG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352481 47 + 4274983 GCCTGGCAATGATAAGCCCATAGGGACTGTTGGTGGGAAGGCTGACG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28584470 46 + 49145316 ACCTGGCAATGATGAGCCCACGGGGACTGTTGGTGGGAA-GCTGACA i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 384810 47 - 4471408 ACCTGGCAATGATAAGCCCACGGGGATTTCTGGTGAGAAGGCTGACA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3978629 47 - 30143674 ACCTGGCAATGATGGGCCCATAGGGACTGTTGGTGGGAAGGTTGACA i micMur3.chr22 C 0 I 1866 s proCoq1.NW_012149263v1 591780 47 + 2501019 ACCTGGCAATGATGAGCCCATAGGGACTGCTGGTGGGAAGGCTGACA i proCoq1.NW_012149263v1 I 167 I 3034 s otoGar3.GL873654 5496950 47 + 5549422 CCCAGCCAATGATGAGCCCACACGGACTGATAGTTGGAAGGCTGACA i otoGar3.GL873654 I 1 I 11 s mm10.chr7 111115913 38 - 145441459 --CTGGCA--GAAGTACTC----GGGCTGTTGG-GGGTACGCTAACA i mm10.chr7 C 0 C 0 s canFam3.chr1 4632329 47 - 122678785 ACCTGGCAGCGATGGGCCCACACAGACTGTTGGTGGAAAGGCTGGCA i canFam3.chr1 C 0 I 11 s dasNov3.JH563638 365219 47 + 643850 ACTTAGCAGTGATGAACCCACAGGGACTGTTGGTGGAAAAGCTGGCA i dasNov3.JH563638 C 0 C 0 e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=944528.000000 s hg38.chr19_GL383574v1_alt 92522 93 + 155864 -------------GTTCCTGGCACGAGCCCCAGGGTGCCTTCTAGAGCAGGCTAACAT-CTTCTCACACTTGA-TCCCGCCCCTGCTCTCCCATGCACAAACGGGGTG s panTro5.chr19 36161081 93 + 61309027 -------------GTTCCTGGCACGAGCCCCAGGGTGCCTTCTAGAGCAGGCTAACAT-CTTCTCACACTTGA-TCCCGCCCCTGCTCTCCCATGCACAAACGGGGTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906270 93 + 64411610 -------------GTTCCTGGCACGAGCCCCAGGGTGCCTTCTAGAGCAGGCTAACAT-CTTCTCACACTTGA-TCCCGCCCCTGCTCTCCCATGCACAAACGGGGTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324807 91 - 8369475 -------------GTTCCTGGCA-GAGCCCCAGGGTGCCTTCTAGAGCAGGCTAACAT-CTTCTCACACTTGA-TCCCG-CCCTGCTCTCCCATGCACAAACGGGGTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918327 93 - 106955855 -------------ATTCCTGGCACGAGCCCCAGGGTGCCTTCTAGAGCAGGCTAACAT-CTTCTCACATTTGA-TCCTGCCCCTGCTCTCCCATGCACAAACAGGGTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231850 93 + 53671032 -------------ATTCCCGGCACGAGCCCCAGGGTGCCTTCTAGAGCAGGCTAACAT-CTTCTCACATTTGA-TCCCGCCCCCGCTCCCCCATGCACAAATGGGGTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683792 93 + 59248254 -------------ATTCCCGGCACGAGCCCCAGGGTGCCTTCTAGAGCAGGCTAACAT-CTTCTCACATTTGA-TCCCGCCCCCGCTCCCCCATGCACAAATGGGGTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550690 93 - 13342542 -------------ATTCCCGGCACGAGCCCCAGGGTGCCTTCTAGAGCAGGCTAACAT-CTTCTCACATTTGA-TCCCGCCCCCGCTCCCCCATGCACAAATGGGGTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480656 93 + 7714307 -------------ATTCCCGGCACGAGCCCCAGGGTGCCTTCTAGAGCAGGCTAACAT-CTTCTCACATTTGA-TCCCGCCCCCGCTCCCCCATGCACAAATGGGGTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287434 93 + 50890351 -------------ATTCCCGGCACGAGCCCCAGGGTGCCTTCTAGAGCAGGCTAACAT-CATCTCACATTTGA-TCCCGCCCCCGCTCCCCCATGCACAAATGGGATG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915618 93 - 2385121 -------------ATTCCCGGCACGAGCCCCAGGGTGCCTTCTAGAGCAGGCTAACAT-CTTCTCACATTTGA-TCCCACCCCCGCTCCCCCATGCACAAATGGGGTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352528 78 + 4274983 -------------ATTCCTGGCATGCG---------------TAGAGCAGGCTAACAT-CTTCTCACATTTGA-TCCCGCCCCCGCTCCCCCATGCACAAATGGGGTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28584516 93 + 49145316 -------------ATTCCTGGCACGAGCCCCAGGGTGCCTTCTAGAGCAGGCCCACAT-CTTCTCACATTTGA-TTCCAACCCTGTTATCCCATGCACAAACAGGGTG i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 384857 93 - 4471408 -------------ATTCCTGGCACAAGCCCCAGGGTGCCTTCTAGAGCAGGCCAACAT-CTTCTCACATTTGA-TCCCGACCCTGCTCTCCCATTCACAAACAGGGTG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5497008 91 + 5549422 -------------ATTGCTGGCATGAGCCCCAGCGTACCTTCTGGAGCAGGCTAACATCCTTCCCA---TTGA-TCCCCACCCCACTCTCCCATGTACAAAGTTGGTG i otoGar3.GL873654 I 11 C 0 s mm10.chr7 111115951 78 - 145441459 -------------GTGAAAGGCCTGAGCCCCAGGCTGCCTGCTGGAGCAGGCTAGCAG-CT----------------CTACCACATTCTCCCACGCACAAACTAGGTG i mm10.chr7 C 0 I 3720 s canFam3.chr1 4632387 94 - 122678785 -------------ATGGCTGGCATGAGCCCCAGGGTGCTTTCTGGAGCAGGCTGACAT-CTTTTCACATTTGATTCCCCACCCCCTTCCACCATGAACAAACTGGGTG i canFam3.chr1 I 11 C 0 s dasNov3.JH563638 365266 103 + 643850 ATACCCCAACAGAATTGCTGGCATGGGCCCCAGGGTGCCTTCTGGAGCAAGCTGACAT---TTCTACATCTAA-TTTCTACCCCACTA-CCTATACACAAATTCAGTG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=368416.000000 s hg38.chr19_GL383574v1_alt 92615 38 + 155864 TGCAAACAGTCTGTTT-AGCTTTTCAAAAATAAAGAGGA s panTro5.chr19 36161174 38 + 61309027 TGCAAACAGTCTGTTT-AGCTTTTCAAAAATAAAGAGGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906363 38 + 64411610 TGCAAACAGTCTGTTT-AGCTTTTCAAAAATAAAGAGGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324898 38 - 8369475 TGCAAACAGTCTGTTT-AGCTTTTCAAAAATAAAGAGGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918420 38 - 106955855 TGCAAACAGTCTGTTT-AGCTTTTCAAAAATAAAGAGGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231943 38 + 53671032 TGCAAACAGTCTGTTT-AGCTTTTCAAAAATAAAGAGGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683885 38 + 59248254 TGCAAACAGTCTGTTT-AGCTTTTCAAAAATAAAGAGGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550783 38 - 13342542 TGCAAACAGTCTGTTT-AGCTTTTCAAAAATAAAGAGGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480749 38 + 7714307 TGCAAACAGTCTGTTT-AGCTTTTCAAAAATAAAGAGGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287527 38 + 50890351 TGCAAACAGTCTGTTT-AGCTTTTCAAAAATAAAGAGGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915711 38 - 2385121 TGCAAACAGTCTGTTT-AGCTTTTCAAAAATAAAGAGGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352606 38 + 4274983 TGTAAACAGTCCGTTT-AGCTTTTCAAAAATAAAGAGGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28584609 38 + 49145316 TGCAAACAGTCTTTTT-AGCCTTTCAAATATAAAGAGGA i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 384950 38 - 4471408 TGCAAACAGTCTTTTT-AGCCCTTCAAATATAAAGAGGA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5497099 39 + 5549422 TGCATGCAGACTTTTTCACCCTGTCAAAAAAAAAAAGGA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4632481 30 - 122678785 TGCACACAGTCT-----GGCCTTTCAA----AAAGAGGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 365369 36 + 643850 TGCACGTAATTT--TC-AACCTTTCAAAAAAGAAGAGGA i dasNov3.JH563638 C 0 I 6745 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e mm10.chr7 111116029 3720 - 145441459 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=10035.000000 s hg38.chr19_GL383574v1_alt 92653 1 + 155864 g s panTro5.chr19 36161212 1 + 61309027 g i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906401 1 + 64411610 g i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324936 1 - 8369475 g i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918458 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231981 1 + 53671032 g i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683923 1 + 59248254 g i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550821 1 - 13342542 g i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480787 1 + 7714307 g i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287565 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915749 1 - 2385121 g i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352644 1 + 4274983 g i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28584647 1 + 49145316 g i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 384988 1 - 4471408 g i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5497138 1 + 5549422 A i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4632511 1 - 122678785 G i canFam3.chr1 C 0 I 4015 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e mm10.chr7 111116029 3720 - 145441459 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=26516.000000 s hg38.chr19_GL383574v1_alt 92654 3 + 155864 gcc s panTro5.chr19 36161213 3 + 61309027 gcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906402 3 + 64411610 gcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324937 3 - 8369475 gcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918459 3 - 106955855 gcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231982 3 + 53671032 gcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683924 3 + 59248254 gcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550822 3 - 13342542 gcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480788 3 + 7714307 gcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287566 3 + 50890351 gcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915750 3 - 2385121 gcc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352645 3 + 4274983 gcc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28584648 3 + 49145316 gcc i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 384989 3 - 4471408 gcc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5497139 3 + 5549422 GGT i otoGar3.GL873654 C 0 I 375 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=214176.000000 s hg38.chr19_GL383574v1_alt 92657 29 + 155864 aggcgcggtggctcatgtctgtaattcca s panTro5.chr19 36161216 29 + 61309027 aggcgcggtggctcatgtctgtaattcca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906405 29 + 64411610 aggcgcggtggctcatgtctgtaattcca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324940 29 - 8369475 aggcgtggtggctcatgtctgtaattcca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918462 29 - 106955855 aggcgcgatggctcatgcctgtaattcca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30231985 29 + 53671032 aggcggggtggctcatgcctgtaattcca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683927 29 + 59248254 aggcggggtggctcatgcctgtaattcca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550825 29 - 13342542 aggcggggtggctcatgcctgtaattcca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480791 29 + 7714307 aggcggggtggctcatgcctgtaattcca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287569 29 + 50890351 aggcggggtggctcatgcctgtaattcca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915753 29 - 2385121 aggcggggtggctcatgcctgtaattcca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2352648 29 + 4274983 aggtggggtggctcatgcctgtaattcca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28584651 29 + 49145316 gggtgcagtggctcacgtctataatccca i calJac3.chr22 C 0 I 18 s aotNan1.NW_018505377v1 384992 29 - 4471408 gggtacagtggctcatatctgtaatccca i aotNan1.NW_018505377v1 C 0 I 585 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5497142 375 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=470603.000000 s hg38.chr19_GL383574v1_alt 92686 74 + 155864 gcactttgggaggcgc------aggtgggtggatca-cttgagctcaggagttcaagaccagcctggccaa---tgtggtgaaa s panTro5.chr19 36161245 74 + 61309027 gcactttgggaggcgc------aggtgggtggatca-cttgagctcaggagttcaagaccagcctggccaa---tgtggtgaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906434 74 + 64411610 gcactttgggaggcgc------aggtgggtggatca-cttgagctcaggagttcaagaccagcctggccaa---tgtggtgaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6324969 74 - 8369475 gcactttgggaggcgc------aggtgggtggatca-cttgagctcaggagttcaagaccagcctggccaa---tgtggtgaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918491 74 - 106955855 gcactttgggaggccc------aggtgagtgaatca-tttgagctcaggagttcaagaccagcctggccaa---tgtggtgaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30232014 74 + 53671032 gcactttgggaggcca------aggtgggtggatca-cttgaggtcaggagttcaagaccagcctggccaa---tgtggtgaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34683956 74 + 59248254 gcactttgggaggcca------aggtgggtggatta-cttgaggtcaggagttcaagaccagcctggccaa---tgtggtgaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550854 84 - 13342542 gcactttgggaggccaaggtggaggtgggtggatcaccttgaggtcaggagttcaagtaccacctggccaaatgcttggtgaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5480820 74 + 7714307 gcactttgggaggcca------aggtgggtggatca-cttgaggtcaggagttcaagaccagcctggccaa---tgtggtgaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287598 74 + 50890351 gcactttgggaggcca------aggtgggtggatca-cttgaggtcaggagttcaagaccagcctggccaa---tgtggtgaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 915782 74 - 2385121 gcactttgggaggcca------aggtgggtggatca-cttgaggtcaggagttcaagaccagcctggccaa---tgtggtgaaa i manLeu1.NW_012102454v1 C 0 I 1118 s colAng1.NW_012111697v1 2352677 74 + 4274983 gcactttgggaggcca------aggtgggtggatca-cttgaggtcaggagttcaagaccagcctggccag---tgtggtgaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28584698 74 + 49145316 gcactttgggaggcca------aggcgggcagatca-tttgcagtcaggagttcgagaacagtctggccaa---catggtaaaa i calJac3.chr22 I 18 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5497142 375 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C a score=174144.000000 s hg38.chr19_GL383574v1_alt 92760 35 + 155864 gcc-catctctact-aaaaatacaaaaattagctggg s panTro5.chr19 36161319 35 + 61309027 gcc-cgtctctact-aaaaatacaaaaattagctggg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906508 35 + 64411610 gcc-cgtctctact-aaaaatacaaaaattagctggg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6325043 35 - 8369475 gcc-cgtctctact-aaaaatacaaaaattagctggg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918565 35 - 106955855 gcc-tgtctctact-aaaaatacaaaaattagctggg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30232088 35 + 53671032 ccc-cgtctctact-aaaaatacaaaaattagctggg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34684030 35 + 59248254 ccc-cgtctctact-aaaaatacaaaaattagctggg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4550938 36 - 13342542 cccgcgtctctact-aaaaatacaaaaattagctggg i macNem1.NW_012011689v1 C 0 I 406 s cerAty1.NW_012005268v1 5480894 35 + 7714307 ccc-cgtctctact-aaaaatacaaaaattagctggg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287672 36 + 50890351 ccc-cgtctctactaaaaaatacaaaaattagctggg i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2352751 35 + 4274983 cca-tgtctctact-aaaaatacaaaaattagctggg i colAng1.NW_012111697v1 C 0 I 17 s calJac3.chr22 28584772 29 + 49145316 -------ctctata-gtaagtataaaaattagctggg i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5497142 375 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e manLeu1.NW_012102454v1 915856 1118 - 2385121 I a score=5265.000000 s hg38.chr19_GL383574v1_alt 92795 3 + 155864 tgt s panTro5.chr19 36161354 3 + 61309027 tgt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906543 3 + 64411610 tgt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6325078 3 - 8369475 tgt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918600 3 - 106955855 tgt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30232123 2 + 53671032 -at i rheMac8.chr19 C 0 I 24 s macFas5.chr19 34684065 2 + 59248254 -at i macFas5.chr19 C 0 I 4 s cerAty1.NW_012005268v1 5480929 2 + 7714307 -at i cerAty1.NW_012005268v1 C 0 I 24 s chlSab2.chr6 29287708 2 + 50890351 -at i chlSab2.chr6 C 0 I 24 s calJac3.chr22 28584801 3 + 49145316 cat i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5497142 375 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e colAng1.NW_012111697v1 2352786 17 + 4274983 I e manLeu1.NW_012102454v1 915856 1118 - 2385121 I e macNem1.NW_012011689v1 4550974 406 - 13342542 I a score=38761.000000 s hg38.chr19_GL383574v1_alt 92798 41 + 155864 ggtggtgtgtgcctgtaattagctgggattacaggtgcgtg s panTro5.chr19 36161357 41 + 61309027 ggtggtgtgtgcctgtaattagctgggattacaggtgcgtg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906546 41 + 64411610 ggtggtgtgtgcctgtaattagctgggattacaggtgcgtg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6325081 41 - 8369475 ggtggtgtgtgcctgtaattagctgggattacaggtgcgtg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918603 41 - 106955855 ggtggcgtgtgcctgtaattagctgggattacaggtgcgtg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34684071 20 + 59248254 ggtgacacacacctataatc--------------------- i macFas5.chr19 I 4 C 0 s calJac3.chr22 28584804 20 + 49145316 ggtggcaggcacctataatc--------------------- i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5497142 375 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e chlSab2.chr6 29287710 24 + 50890351 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e colAng1.NW_012111697v1 2352786 17 + 4274983 I e manLeu1.NW_012102454v1 915856 1118 - 2385121 I e cerAty1.NW_012005268v1 5480931 24 + 7714307 I e macNem1.NW_012011689v1 4550974 406 - 13342542 I e rheMac8.chr19 30232125 24 + 53671032 I a score=478666.000000 s hg38.chr19_GL383574v1_alt 92839 145 + 155864 ccag-tactcgggaggctgaggcaggaaaatcacttgaacccaggaggcggagattccagtgagccgagatggcgccattgcactgcagcctgggcaagaaagcgagactctct--caaaaaaaagaaaGAGGAGCTGTccaggcgca s panTro5.chr19 36161398 145 + 61309027 ccat-tactcgggaggctgaggcaggaaaatcacttgaacccaggaggcggagattccagtgagccgagatggcgccattgcactgcagcctggtcaagaaagcgagactctct--caaaaaaaagaaaGAGGAGCTggccaggcgca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906587 142 + 64411610 ccag-tactcgggaggctgaggcaggaaaatcacttgaacccaggaggcggagattccagtgagccgagatggcgccattgcactgcagcctggtcaagaaagcgagactctc-----aaaaaaagaaaGAGGAGCTggccaggcgca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6325122 144 - 8369475 ccag-tactcgggaggctgaggcaggaaaatcacttgaacccaggaggcggagattccagtgagccgaaatggcgccattgcactgcagcctgggcaagaaagcgagactctt---caaaaaaaagaaaGAGGAGCTggccaggcatg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918644 146 - 106955855 ccag-tactggggaggctgaggcaggaaaatcacttgaacccaggaggcggagattccagtgagccgagatggcgccattgcactgcagcctgggcaagaaagcaagactctcta-aaaaaaaaataaaGAGGAGCTggccaggcgct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30232149 148 + 53671032 ccagctacttgagaggctgaggcaggaaaatcacttgaacccaggaggcagagattccagtgagctgagatggcaccactgcactgcagcctgggcaacaaagtgagagtctgtctcaagaaaaataaaGAGGACTTggccaggcgca i rheMac8.chr19 I 24 C 0 s macFas5.chr19 34684091 148 + 59248254 ccagctactcgagaggctgaggcaggaaaatcacttgaacccaggaggcagagattccagtgagctgagatggcaccactgcactgcagcctgggcaacaaagtgagagtctgtctcaagaaaaataaaGAGGACTTggccaggcgca i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5480955 148 + 7714307 ccagctactcgagaggctgaggcaggaaaatcacttgaacccaggaggcagagattccagtgagccgagatggcaccactgcactgcagcctgggcaacaaagtgagagtctgtctcaagaaaaataaaGAGGAGTTggccaggcgca i cerAty1.NW_012005268v1 I 24 C 0 s chlSab2.chr6 29287734 148 + 50890351 ccagctactcgagaggctgaggcaggaaaatcacttgaacccaggaggcagagattccagtgagccaagatggtaccactgcactgcagcctgggcaacaaagtgagagtctgtctcaagaaaaataaaGAGGAGTTggccaggcgca i chlSab2.chr6 I 24 C 0 s calJac3.chr22 28584824 144 + 49145316 ccagctactcgcaaggctgaggcaggagaatcccttgaccctgaaaggcagaggttgcaatgagatgagatcacgccactgcactccagcctgggtgaagaagcaagactccatctcaaacaataaaaataaaagctg----ggcgca i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5497142 375 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e colAng1.NW_012111697v1 2352786 17 + 4274983 I e manLeu1.NW_012102454v1 915856 1118 - 2385121 I e macNem1.NW_012011689v1 4550974 406 - 13342542 I a score=187912.000000 s hg38.chr19_GL383574v1_alt 92984 52 + 155864 gtggct-catacctgtaatcccagcactttgggaggctgaggtg---ggtggatcc- s panTro5.chr19 36161543 52 + 61309027 gtggct-catacctgtaatcccagcactttgggaggctgaggtg---ggtggatcc- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906729 52 + 64411610 gtggct-catacctgtaatcccagcactttgggaggctgaggtg---ggtggatcc- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6325266 52 - 8369475 gtggct-catacctgtaatcccagcactttgggaggctgaggtg---ggtggatcc- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918790 52 - 106955855 gtggct-catatctgtaatcccagcacgttgggaggctgaggtg---ggtggatcc- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30232297 52 + 53671032 gtgact-catacctgtaatcccagcacgttgggaggctgaggcg---gatggatca- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34684239 52 + 59248254 gtgact-catacctgtaatcccagcacgttgggaggctgaggcg---ggtggatca- i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5481103 52 + 7714307 gtgact-catacctgtaatcccagcacgttgggaggctgaggca---ggtggatca- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287882 52 + 50890351 gtgact-catacctgtaatcccagcacgttgggaggctgagacg---ggtggatca- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 28584968 52 + 49145316 gtggct-caagcttgtaattccagcactttgggaagctgaggca---ggcaaatca- i calJac3.chr22 C 0 C 0 s otoGar3.GL873654 5497517 48 + 5549422 TTggctccgtgcctgtggctcaagt---------ggctaaggtgccagccacataca i otoGar3.GL873654 I 375 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e colAng1.NW_012111697v1 2352786 17 + 4274983 I e manLeu1.NW_012102454v1 915856 1118 - 2385121 I e macNem1.NW_012011689v1 4550974 406 - 13342542 I a score=259298.000000 s hg38.chr19_GL383574v1_alt 93036 59 + 155864 cttgagatcaggagttcgagactag-cctggccaac-------a-tgatgaaaacc-catctct---aaaaa s panTro5.chr19 36161595 59 + 61309027 cttgagatcaggagttcaagactag-cctggccaac-------a-tgatgaaaacc-catctct---aaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906781 58 + 64411610 cttgagatcaggagttcgagactag-cctggccaac-------a-tgatgaaaacc-catctct----aaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6325318 59 - 8369475 cttgagatcaggagttcgagactag-cctggccaac-------a-tgatgaaaacc-catctct---aaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918842 59 - 106955855 ctcgagatcaggagttcgagactag-cctggccaac-------a-tggttaaaacc-catctct---aaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30232349 59 + 53671032 cttgaggtcaggagttcgagaccag-cctggccaac-------a-tggtgaaaacc-catctct---aaaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34684291 59 + 59248254 cttgaggtcaggagttcgagaccag-cctggccaac-------a-tggtgaaaacc-catctct---aaaaa i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5481155 59 + 7714307 cctgaggtcaggagttcgagaccag-cctggccaac-------a-tggtgaaaacc-catctct---aaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287934 59 + 50890351 cttgaggtcaggagttcgagaccag-cctggccaac-------a-tggtgaaaacc-catctct---aaaaa i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2352803 60 + 4274983 cttgaggtcaggagttcgagaccagccctggccaac-------a-tggtgaaaacc-catctct---aaaaa i colAng1.NW_012111697v1 I 17 C 0 s calJac3.chr22 28585020 61 + 49145316 --cgaggtcagaagttcgagaccag-cctggtcagc-------attggtgaaaccc-cgtctctactaaaaa i calJac3.chr22 C 0 C 0 s otoGar3.GL873654 5497565 57 + 5549422 cctaaggtggcaggttctaatccag-cccggcccaccaaaacaa-caatgaaggctgca------------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e manLeu1.NW_012102454v1 915856 1118 - 2385121 I e macNem1.NW_012011689v1 4550974 406 - 13342542 I a score=368801.000000 s hg38.chr19_GL383574v1_alt 93095 93 + 155864 tac---aaaaattagctgggcgtggtggcatgtgcctgtaatcccagctactcaggaggctgaggcagcagaatctcttgaacgggggaggcggag s panTro5.chr19 36161654 93 + 61309027 tac---aaaaattagctgggcgtggtggcatgtgcctgtaatcccagctactcaggaggctgaggcagcagaatctcttgaacaggggaggcggag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906839 91 + 64411610 tac----aaaattagctgggcatggtggcatgtgcctgtaatcccagctactcaggaggctgaggcagcagaatctcttgaa-gggggaggcggag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6325377 93 - 8369475 tac---aaaaattagctgggtgtggtggcgtgtgcctgtaatcccagctactcaggaggctgaggcagcagaatctcttgaacgagggaggcggag i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30232408 93 + 53671032 tac---aaaaattagctgggagtggtggcgtgtgcctgtaatcccagctacttgggaggctgaggcaggagaatctcttgaactggggaggtgaac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34684350 93 + 59248254 tac---aaaaattagctgggagtggtggcgtgtgcctgtaatcccagctacttgggaggctgaggcaggagaatctcttgaactggggaggtgaac i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5481214 93 + 7714307 tac---aaaaattagctgggagtggtggcgtgtgcctgtaatcccagctacttgggaggctgaggcaggagaatctcttgaactggggaggtgaac i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29287993 93 + 50890351 tac---aaaaattagctgggagtggtggcgtgtgcctgtaatcccagctacttgggaggctgaggcaggagaatctcttgaactggggaggtgaag i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2352863 93 + 4274983 tac---aaaaattggctgggagtggtggcgtgtgcctgtaatcccagctacttgggaggctgaggcaggagaatctcttgaactggggaggtgaag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585081 94 + 49145316 taca--aaaaattagccaggcatggtggtgtgcgcctgtagtcccagctacctgagaggctgaggcaggagaattgcttgaacccagcaggtggag i calJac3.chr22 C 0 C 0 s otoGar3.GL873654 5497622 93 + 5549422 ---accaaaaaatagccgggtcctgtggtgggtggctgtggtcccagctatttaggaggcggaggcaggagacttgcttgagcctagcagttggag i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e manLeu1.NW_012102454v1 915856 1118 - 2385121 I e macNem1.NW_012011689v1 4550974 406 - 13342542 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=388454.000000 s hg38.chr19_GL383574v1_alt 93188 94 + 155864 gttgcagtgagccaagatcacaccagtg--cactccagcctgggcgacagagcaagactccgtctcaaaaaataaataaataaaataaaataaaaa s panTro5.chr19 36161747 94 + 61309027 gttgcagtgagccaagatcacaccagtg--cactccagcctgggcgacagagcaagactccgtctcaaaaaataaataaataaaataaaataaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39906930 94 + 64411610 gttgcagtgagccaagatcacaccagtg--cactccagcctgggcgacagagcaagactccgtctcaaaaaataaataaataaaataaaataaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6325470 94 - 8369475 gttgcagtgagccaagatcacaccaatg--cactccagcctgggcgacagagcaagactccgtctcaaaaaataaataaataaaataaaataaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30232501 89 + 53671032 gttgcagttagccaagatcacgccaatg--cactccagcctgggccacagagcaagactctatctcaaaaaataaataaat-----aaaataaaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34684443 89 + 59248254 gttgcagttagccaagatcacgccaatg--cactccagcctgggccacagagcaagactctatctcaaaaaataaataaat-----aaaataaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4551380 93 - 13342542 gttgcagttagccaagatcacgccaatgcccatcccagcttgggccacagagcaagactctatctcaaaaaataaatacatta---aaaataaaaa i macNem1.NW_012011689v1 I 406 C 0 s cerAty1.NW_012005268v1 5481307 89 + 7714307 gttgcagttagccaagatcacaccaatg--cactccagcctgggccacagagcaagactctatctcaaaaaataaataaat-----aaaataaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29288086 89 + 50890351 gttgcagttagccaagatcacgccaatg--cactccagcctgggccacagagcaagactctatctcaaaaaataaataaat-----aaaataaaaa i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2352956 89 + 4274983 gttgcagttagccaagatcatgccaatg--cactctagcctgggccacagagcaagactctgtctcaaaaaataaagaaat-----aaaataaaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585175 78 + 49145316 gttgcagtgagccaagtttgcgccactg--tactctagcctgggtgacaga------------ctcaatcaatcaataaaa----taaaataaaaa i calJac3.chr22 C 0 I 1 s otoGar3.GL873654 5497715 77 + 5549422 gttactgtgagctgtgat---accacat--cactctatccagggggatagcttgaggttctgtctcaaaaaa--------------aaaaaaaaaa i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e manLeu1.NW_012102454v1 915856 1118 - 2385121 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=149267.000000 s hg38.chr19_GL383574v1_alt 93282 38 + 155864 -TAAAGAG--GAGATTAAAATTCTCAGCAAACTAGAAA--CAG s panTro5.chr19 36161841 38 + 61309027 -TAAAGAG--GAGATTAAAATTCTCAGCAAACTAGAAA--TAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39907024 38 + 64411610 -TAAAGAG--GAgattaaaattctcagcaaactagaaa--tag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6325564 38 - 8369475 -TAAAGAG--GAGATTAAAATTCTCAGCAAACTAGAAA--TAG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30232590 38 + 53671032 -taaaGAG--GAGATTAAAATTCTCAGCAAACTAGAAA--TAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34684532 38 + 59248254 -taaaGAG--GAGATTAAAATTCTCAGCAAACTAGAAA--TAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4551473 39 - 13342542 -T-AAGAG--GAGATTAAAATTCTCAGCAAACTAGAACATTAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5481396 38 + 7714307 -taaaGAG--GAGATTAAAATTCTCAGCAAACTAGAAA--TAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29288175 38 + 50890351 -TAGAGAG--GAGATTAAAATTCTCAGCAAACTAGAAA--TAG i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2353045 38 + 4274983 -taaaGAG--GAGATTAAAATTCTCAGCAAACTAGAAA--TAG i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5497792 41 + 5549422 TTGAAAAGTTAggctcggcactcatagcacagtggtta--tag i otoGar3.GL873654 C 0 I 424 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e manLeu1.NW_012102454v1 915856 1118 - 2385121 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=68082.000000 s hg38.chr19_GL383574v1_alt 93320 22 + 155864 ATGGTAAC-----tttttttttttttt s panTro5.chr19 36161879 26 + 61309027 ATGGTAAC-tttttttttttttttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39907062 22 + 64411610 atggtaac-----tttttTTTTTTTTT i panPan2.chr19 C 0 M 928 s gorGor5.CYUI01015150v1 6325602 22 - 8369475 ATGGTAAC-----tttttttttttttt i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30232628 27 + 53671032 ATGGTAACttttttttttttttttttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34684570 27 + 59248254 ATGGTAACttttttttttttttttttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4551512 26 - 13342542 ATGGTAAC-tttttttttttttttttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5481434 21 + 7714307 ATGGTAAC------ttttttttttttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29288213 24 + 50890351 ATGGTAAC---tttttttttttttttt i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2353083 20 + 4274983 ATGGTAAC-------tttttttgttgt i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5497833 424 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e manLeu1.NW_012102454v1 915856 1118 - 2385121 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=16704.000000 s hg38.chr19_GL383574v1_alt 93342 5 + 155864 ttttg s panTro5.chr19 36161905 5 + 61309027 ttttg i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6325624 5 - 8369475 ttttg i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30232655 5 + 53671032 ttttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34684597 5 + 59248254 ttttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4551538 5 - 13342542 ttttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5481455 5 + 7714307 ttttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29288237 5 + 50890351 ttttg i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2353103 5 + 4274983 ttttg i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5497833 424 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e manLeu1.NW_012102454v1 915856 1118 - 2385121 I e nomLeu3.chr10 63918901 0 - 106955855 C e panPan2.chr19 39907084 928 + 64411610 M a score=1115196.000000 s hg38.chr19_GL383574v1_alt 93347 315 + 155864 agacggagtcttgttctgt-cacccaggctggagtgtaatgacgaaaacatggctca-ctgca-gcctccaact-cctacacttaa--tcagtcctcccacttcagcctcccaagtagctgggaccacagccg-tgtgccaccatgcctggctaatttttgta-ttttttgtaga-gatggagttttgccat--gttgcccaggct-gttctcacactcctgggctcaattgatcctcccacctcagcttcccaaagtgctggga-ttacagg-cgtgag--ccaccttgcctgcccTACAATTAAGTAAAAT-Atcaaaatacagaaacat s panTro5.chr19 36161910 315 + 61309027 agacggagtcttgttctgt-cacccaggctggagtgtaatgacgaaaacatggctca-ctgca-gcctccaact-cctacacttaa--tcagtcctcccacttcagcctcccaagtagctgggaccagagccg-tgtgccaccatgcctggctaatttttgta-ttttttgtaga-gatggagttttgccat--gttgcccaggct-gttctcacactcctgggctcaattgaccctcccacctcagcttcccaaagtgctggga-ttacagg-cgtgag--ccaccttgcctgcccTACAATTAAGTAAAAT-Atcaaaatacaggaacat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39908012 315 + 64411610 agacggagtcttgttctgt-cacccaggctggagtgtaatgacgaaaacatggctca-ctgca-gcctccaact-cctacacttaa--tcagtcctcccacttcagcctcccaagtagctgggaccagagccg-tgtgccactatgcctggctaatttttgta-ttttttgtaga-gatggagttttgccat--gttgcccaggct-gttctcacactcctgggctcaattgaccctcccacctcagcttcccaaagtgctggga-ttacagg-cgtgag--ccaccttgcctgcccTACAATTAAGTAAAAT-Atcaaaatacaggaacat i panPan2.chr19 M 928 C 0 s gorGor5.CYUI01015150v1 6325629 315 - 8369475 agacggagtcttgttctgt-cacccaggctggagtgtaatgacgaaaacatggctca-ccaca-gcctccaact-cctacacttaa--tcagtcctcccacttcagcctcccaagtagctgagaccacagccg-tgtgccaccatgcctggctaatttttgta-ttttttgtaga-gatggagttttgccat--gttgcccaggct-ggtctcaaactcctgggctcaattgatcctcccacctcagcttcccaaagtgctggga-ttacagg-cgtgag--ccaccttgcctgcccTACAAttaagtaaaat-atcagaatacagaaacat i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30232660 315 + 53671032 agatatagtcttgctctat-cgcccgggctagagtgtattgatgaaaacatggctca-ccgca-gcctccaact-cctatgcttaa--tcagtctttccacttcagcctcccaagaggctgggaccacaggcc-tgcaccaccatgcctggctaatttttgca-ttttttgtaga-gatggagttttgccat--gttgcccaggct-ggtctcaaaatcctgggctcaatttatcctcccacctcagcttcccaaagtgctggga-ttacagg-catgag--caactttgcctgcccTACAATTAAGTAAAAT-ATCAAaatacacaaacat i rheMac8.chr19 C 0 I 404 s macFas5.chr19 34684602 312 + 59248254 agatatagtcttgctctat-cgcccgggctagagtgtattgatgaaaacatggctca-ccgca-gcctccaact-cctatgcttaa--tcagtctttccacttcagcctcccaagaggctgggaccacaggcc-tgcaccaccatgcctggctaatttttgca-ttttttgtaga-gatggagttttgccat--gttgcccaggct-ggtctcaaaatcctgggctcaatttatcctcccacctcagcttcccaaagtgctggga-ttacagg-catgag--caactttgcctgcccTACAATTAAGTAAAAT-ATCAAaatacacaaa--- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4551543 329 - 13342542 agaaatagtcttgctctatccgcccgggctagagtgtaatgatgaaaacatggctcacccgcaggcctccaactccctatgcttaaatcaagtctttccacttcagcctcccaagaggct-ggaccacaggccttgcaccaccat-cctggctaatttttgcatttttttgtaaaggatggagttttgccattgtttgcccaggctgggtctcaaaatcctgggctc-atttaatctccactctcagcttcccaaagtgctgggagttacaggcCATGGAGTCCAACTTGCCTACCCTACAATTAAGTAAAATAATCAAaatacacaaacat i macNem1.NW_012011689v1 C 0 I 2451 s cerAty1.NW_012005268v1 5481460 315 + 7714307 agatgtagtcttgctctat-cgcccgggctagagtgtaatgatgaaaacatggctca-ccgca-gcctccaact-cctatgcttaa--tcagtccttccacttcagcctcccaagaggctgggaccacaggcc-tgcaccaccatgcctggctaatttttgca-ttttttgtaga-gatggagttttgccat--gttgcccaggct-ggtctcaaaatcctgggctcaatttatcctcccacctcagcttcccaaagtgctggga-ttacagg-caggag--caactttgcctgcccTACAATTAAGTAAAAT-ATCAAAATACACAAACAT i cerAty1.NW_012005268v1 C 0 I 1032 s chlSab2.chr6 29288242 312 + 50890351 agatgtagtcttgctctat-cgcccgggctagagtgtaatgacgaaaacatggctca-ccgca-gcctccaact-cctatgcttaa--tcagtccttccacttcagcctcccaagaggctgggaccacaggcc-tgcaccaccatgcctggctaatttttgca-ttttttgtaga-gatggagttttgccat--gttgcccaggct-ggtctcaaaatcctgggctcaatttatcctcccacctcagcttcccaaagtgctggga-ttacagg-catgag--ccactctgcctgcccTACAATTAAGtaaaat-atcaaaatacacaaa--- i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2353108 315 + 4274983 agatgtagtcttgctctgt-cacccaggctagaaagtaatgacaaaaacatggctca-ccgca-gcctccgact-cctatgcttaa--tcagtccttccacttcagcctcccaagtagctgggaccacaggcg-tgcaccaccatgcctggctaatttttgca-ttttttgtaga-gatggagttttgccat--gttgcccaggct-ggtctcaaactcctgggctcaatttaacctcccacctcagcttcccaaagtgctggga-ttacagg-cataag--ccactttgcctgcccTACAATTAAGTAAAAT-Atcaaaatacacaaacat i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5497833 424 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e manLeu1.NW_012102454v1 915856 1118 - 2385121 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=27273.000000 s hg38.chr19_GL383574v1_alt 93662 12 + 155864 catttgtttctg s panTro5.chr19 36162225 12 + 61309027 catttgtttcta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39908327 12 + 64411610 catttgtttcta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6325944 12 - 8369475 catttgtttcta i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34684914 12 + 59248254 catttgtttctg i macFas5.chr19 C 0 I 671 s chlSab2.chr6 29288554 12 + 50890351 catttgtttcta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 916974 12 - 2385121 CATTtgtttcta i manLeu1.NW_012102454v1 I 1118 C 0 s colAng1.NW_012111697v1 2353423 9 + 4274983 ---ttgtttcta i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5497833 424 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e cerAty1.NW_012005268v1 5481775 1032 + 7714307 I e macNem1.NW_012011689v1 4551872 2451 - 13342542 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=63483.000000 s hg38.chr19_GL383574v1_alt 93674 34 + 155864 tctacaagcaacaagtaattagacaatgaaaagt s panTro5.chr19 36162237 34 + 61309027 tctacaagcaacaagtaattagacaatgaaaagt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39908339 34 + 64411610 tctacaagcaacaagtaattagacaatgaaaagt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6325956 34 - 8369475 tctacaagcaacaagtaattagacaatgaaaagt i gorGor5.CYUI01015150v1 C 0 C 0 s chlSab2.chr6 29288566 34 + 50890351 tctacaagcaacaagtaattagaaaatgaaaagt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 916986 34 - 2385121 tctacaagcaacaagtaattagaaaatgaaaagt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2353432 34 + 4274983 tctacaagcaacaagtaattagaaaatgaaaaat i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5497833 424 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e cerAty1.NW_012005268v1 5481775 1032 + 7714307 I e macNem1.NW_012011689v1 4551872 2451 - 13342542 I e macFas5.chr19 34684926 671 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=17555.000000 s hg38.chr19_GL383574v1_alt 93708 8 + 155864 caaaacat s panTro5.chr19 36162271 8 + 61309027 caaaacat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39908373 8 + 64411610 caaaacat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6325990 8 - 8369475 caaaacat i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34685597 8 + 59248254 caaAccac i macFas5.chr19 I 671 C 0 s chlSab2.chr6 29288600 8 + 50890351 caaaacac i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 917020 8 - 2385121 caaaacac i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2353466 8 + 4274983 caaaacac i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5497833 424 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e cerAty1.NW_012005268v1 5481775 1032 + 7714307 I e macNem1.NW_012011689v1 4551872 2451 - 13342542 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=166327.000000 s hg38.chr19_GL383574v1_alt 93716 63 + 155864 tgccatttgtaatagtaccccaccaaaacaataaaatacctagcaatctaatgaaaaatgtgc s panTro5.chr19 36162279 63 + 61309027 tgccatttgtaatagtaccccaccaaaacaataaaatacctagcaatctaatgaaaaatgtgc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39908381 63 + 64411610 tgccatttgtaatagtaccccaccaaaacaataaaatacctagcaatctaatgaaaaatgtgc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6325998 63 - 8369475 tgccatttgtaatagtaccccaccaaaacaataaaatacctagcaatctaatgaaaaatgtgc i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34685605 52 + 59248254 tgccatttgtaatagtaccccacccaaacaataaaatacctagcaatctaat----------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4554323 52 - 13342542 tgccatttgtaatagtaccccacccaaacaataaaatacctagcaatctaat----------- i macNem1.NW_012011689v1 I 2451 C 0 s chlSab2.chr6 29288608 52 + 50890351 tgccatgtgtaatagtaccccaccaaaacaataaaatacctagcaatctaat----------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 917028 52 - 2385121 tgccatttgtaatagtaccccacccaaacaataaaatacctagcaatctaat----------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2353474 63 + 4274983 tgccatttgtaatagtaccccaccaaaacaataaaatacctagcaatctaatgaaaaatgtgc i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5497833 424 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e cerAty1.NW_012005268v1 5481775 1032 + 7714307 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=2552.000000 s hg38.chr19_GL383574v1_alt 93779 1 + 155864 g s panTro5.chr19 36162342 1 + 61309027 g i panTro5.chr19 C 0 C 0 s panPan2.chr19 39908444 1 + 64411610 g i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6326061 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34685657 1 + 59248254 g i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4554375 1 - 13342542 g i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5482807 1 + 7714307 g i cerAty1.NW_012005268v1 I 1032 C 0 s chlSab2.chr6 29288660 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 917080 1 - 2385121 g i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5497833 424 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353537 0 + 4274983 C e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=651534.000000 s hg38.chr19_GL383574v1_alt 93780 167 + 155864 aaaaatgtgcaagacttctacactgacaactgcaaaacactgttgggaaaaGAGCATATCTTCAAGACC--TTGGAGTA---AGCAGAGAGGACACAAAAAGTGA-----------TCATGTCTTT--gaggctgaggtaggaggattgcttgagcccaggagtttgaggccagctgggacaaaa s panTro5.chr19 36162343 167 + 61309027 aaaaatgtgcaagacttctacactgacaactgcaaaacactgttgggaaaaGAGCATATCTTCAAGACC--TTGGAGTA---AGCAGAGAGGACACAAAAAGTGA-----------TCATGTCTTT--gaggctgaggtaggaggattgcttgagcccaggagtttgaggccagctgggacaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39908445 167 + 64411610 aaaaatgtgcaagacttctacactgacaactgcaaaacactgttgggaaaaGAGCATATCTTCAAGACC--TTGGAGTA---AGCAGAGAGGACACAAAAAGTGA-----------TCATGTCTTT--gaggctgaggtaggaggattgcttgagcccaggagtttgaggccagctgggacaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6326062 167 - 8369475 aaaaatgtgcaagacttctacactgacaactgcaaaacactgctgagaaaagagcataTCTTCAAGACC--TTGGAGTA---AGCAGAGAGGACACAAAAAGTGA-----------TCATGTCTTT--gaggctgaggtaggaggattgcgtgagcccaggagtttgaggccagctgggacaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34685658 169 + 59248254 aaaaacgtgcaagacttctgcattgaaaactgcagaatgctgttgggaaaaGAGCATATCTTCAAGACC--TTGGAGTA---AGCAGAGAGGACACAAAAAGTGA-----------TCAAGTctttgggaggctgagataggaggattgcttgagcccaggagttagaggccagctgggacaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4554376 169 - 13342542 aaaaacgtgcaagacttctgcattgaaaactgcagaatgctgttgggaaaaGAGCATATCTTCAAGACC--TTGGAGTA---AGCAGAGAGGACACAAAAAGTGA-----------TCAAGTctttgggaggctgagataggaggattgcttgagcccaggagttagaggccagctgggacaaaa i macNem1.NW_012011689v1 C 0 I 34 s cerAty1.NW_012005268v1 5482808 169 + 7714307 aaaaacgtgcaagaattctgcattgaaaactgcagaacgatgttgggaaaaGAGCATATCTTCAAGACC--TTGGAGTA---AGCAGAGAGGACACAAAAAGTGA-----------TCAAGTctttgggaggctgagataggaggattgcttgagcccaggagttagaggccagctgggacaaca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29288661 168 + 50890351 aaaaatgtgcaagacttctgcattgaaaactgcagaatgctg-tgggaaaagagcataTCTTCAAGACC--TTGGAGTA---AGCAGAGAGGACACAAAAAGTGA-----------TCATGTctttgggaggctgaggtaggaggactgcttgagcccaggagttagaggccagctgggacaaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 917081 169 - 2385121 aaaaacgtgcaagaattctgcattgaaaactgcagaatgctgttgggaaaaGAGCATATCTTCAAGACC--TTGGAGTA---AGCAGAGAGGACACAAAAAGTGA-----------TCAAGTctttgggaggctgagataggaggattgcttgagcccaggagttagaggccagctgggacaaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2353537 159 + 4274983 ----------aaaacttctgcattgaaaactgcaaaatgctactgggaaaaGAGCATATCTTCAAGACC--TTGGAGTA---AGCAGAGAGGACACAAAAAGTGA-----------TCATGTctttgggaggctgaggtaggaggattgcttgagcccaggagttagaggccagctgggacaaaa i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5498257 178 + 5549422 aaaaatgttcagagtgtaaattatgatggc--caaaac----ctggaaataactcaaatgtccaacaataattagaatggataGCAggctgggcacagtggctcacacctacaatcccagcactctgggaggctgaggcaggtggatctcctaagctcacaagttcgagaccaacctgtgctag- i otoGar3.GL873654 I 424 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=78941.000000 s hg38.chr19_GL383574v1_alt 93947 28 + 155864 cagtgagaccccgtagctac-aaaaaaat s panTro5.chr19 36162510 29 + 61309027 cagtgagaccccgtcgctacaaaaaaaat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39908612 28 + 64411610 cagtgagatcccgtcgctac-aaaaaaat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6326229 28 - 8369475 cagtgagaccccgtcgctac-aaaaaaat i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34685827 28 + 59248254 tggcgagactccatcactac-acaaaaat i macFas5.chr19 C 0 I 1 s cerAty1.NW_012005268v1 5482977 28 + 7714307 cggcgagactccatcactac-aaaaaaAT i cerAty1.NW_012005268v1 C 0 I 6 s chlSab2.chr6 29288829 28 + 50890351 cagtgagaccccattactac-aaaaaaAT i chlSab2.chr6 C 0 I 6 s manLeu1.NW_012102454v1 917250 28 - 2385121 cagcgagactccatcactac-aaaaaaAT i manLeu1.NW_012102454v1 C 0 I 6 s colAng1.NW_012111697v1 2353696 28 + 4274983 cagcgagaccccatcactac-aaaaaaAT i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5498435 22 + 5549422 -agcaagaccccacctctaa-aaa----- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e mm10.chr7 111116029 3720 - 145441459 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=512.000000 s hg38.chr19_GL383574v1_alt 93975 4 + 155864 taaa s panTro5.chr19 36162539 4 + 61309027 taaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39908640 3 + 64411610 t-aa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6326257 4 - 8369475 taaa i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34685856 3 + 59248254 -taa i macFas5.chr19 I 1 C 0 s colAng1.NW_012111697v1 2353724 3 + 4274983 -TAA i colAng1.NW_012111697v1 C 0 I 2 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5498457 0 + 5549422 C e mm10.chr7 111116029 3720 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=910.000000 s hg38.chr19_GL383574v1_alt 93979 1 + 155864 a s panTro5.chr19 36162543 1 + 61309027 a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39908643 1 + 64411610 a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6326261 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34685859 1 + 59248254 a i macFas5.chr19 C 0 I 1 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5498457 0 + 5549422 C e mm10.chr7 111116029 3720 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=209377.000000 s hg38.chr19_GL383574v1_alt 93980 344 + 155864 attagctggtcatggtgatgcatgcctatagtcttaactacttgggaggctgagacag---aatcgcttgagcccaggagttcaaggctatgtttgtg----------ccactgcactctagcctgagcaacccagtgagaccctgtctctaaaaaaaataaaaTACTTTTAAAAAGTGGTAACTTCTggccctgcatagtggctc-acacctgtaatcacagcactttgggaggccaaggtg-----ggcagatcacctgaggtcaggattttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatccaaaaagtagccaggcgtggtggcatgctcctgtagtcccag s panTro5.chr19 36162544 344 + 61309027 attagctggtcatggtgatgcatgcctatagtcttaactacttgggaggctgagacag---aatcgcttgagcccaggagttcaaggctatgtttgtg----------ccactgcactctagcctgggcaacccagtgagaccctgtctctaaaaaaaataaaaTACTTTTAAAAAGTGGTAACTTCTggccctgcatagtggctc-acacctgtaatcacagcactttgggaggccaaggtg-----ggcagatcacctgaggtcaggattttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatccaaaaagtagccaggcgtggtggcacgctcctgtagtcccaA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39908644 343 + 64411610 attagctggtcatggtgatgcatgcctatagtcttaactacttgggaggctgagacag---aatcgcttgagcccaggagttcaaggctatgtttgtg----------ccactgcactctagcctgggcaacccagtgagaccctgtctct-aaaaaaataaaaTACTTTTAAAAAGTGGTAACTTCTggccctgcatagtggctc-acacctgtaatcacagcactttgggaggccaaggtg-----ggcagatcacctaaggtcaggattttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatccaaaaagtagccaggcgtggtggcacgctcctgtagtcccaA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6326262 344 - 8369475 attagctggtcatggtgatgcatgcctatagtcttaactacttgggaggctgagacag---aatcgcttgagcccaggagttcaaggctatgtttgtg----------ccactgcactctagcctgggcaacccagtgagaccctgtctctaaaaaaaataaaaTACTTTTAAAAAGTGGTAACTTCTggccctgcatagtggctc-acacctgtaatcacagcactttgggaggccaaggtg-----ggcagatcacctgaggtcaggatttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatccaaaaagcagccaggcatggtggcatgctcctgtagtcccag i gorGor5.CYUI01015150v1 C 0 C 0 s otoGar3.GL873654 5498457 292 + 5549422 --tagctgggcatcatagagggcgcctgtagtcccagttatttgggaggtgaaggcaagataatcgtttaagcacaatagtttgagttt---cctgtgaactgtgacaccatggcactctaccgagggcaaaatagtcaaactctgtctca---------------------------------------------------gctcgacacctgcag-ctcagc---------ggcgagggtgccagccacataacaccagagctggccaattcaaatcaagcccag---gcctgccaaacaacaatgacaactacaa--ccaaaaaatagccgggcattgtggtgggcacctattgtcccag i otoGar3.GL873654 C 0 I 5328 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e mm10.chr7 111116029 3720 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=167517.000000 s hg38.chr19_GL383574v1_alt 94324 309 + 155864 GAGTACTTATCAATCAAATATACGAAAAAAAATTTGCTTTACacaaaataaatgaatctcacagacatcaagatgagtgaaagaatccCAAGCGGTTGGGATTACCACAGGTGTGAGTCACTGTGCCCAGCCTCTCTCTCTCTCCTTTTTGttttt-----tttgtttgtttgtttgcttttttgagatggagtctcattctgtcacccaggctggtgtgcagtggcaccatcttggctcactacaagctccgcctcccgggttcacgccattctctcacctcagcctcccgagtagctgggactacaggcgcc s panTro5.chr19 36162888 311 + 61309027 GAGTACTTATCAATCAAATATACGAAAAAAAATTTGCTTTACacaaaataaatgaatctcacagacatcaagatgagtgaaagaatcccaaacggttgggattaccacaggtgtgagtcactgtgcccagccTCTCTCCCTCTCCTTtttgttttt---tgtttgtttgtttgtttgcttttttgagatggagtctcgttctgtcacccaggctggtgtgcagtggcaccatcttggctcactacaagctccgcctcccgggttcacaccattctctcacctcagcctcccgagtagctgggactacaggcgcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39908987 310 + 64411610 GAGTACTTATCAATCAAATATACG-AAAAAAATTTGCTTTACACAAAATAAATGAATCTCACAGACATCAAGATGAGTGAAAGAAtcccaaacagttgggattaccacaggtgtgagtcactgtgcccagccTCTCTCCCTCTCCTTtttgttttt---tgtttgtttgtttgtttgcttttttgagatggagtctcgttctgtcacccaggctggtgtgcagtggcaccatcttggctcactacaagctccgcctcccgggttcacaccattctctcacctcagcctcccgagtagctgggactacaggcncc i panPan2.chr19 C 0 I 1626 s gorGor5.CYUI01015150v1 6326606 310 - 8369475 GAGTACTTATCAATCAAATATACGAAAAAAAATTTGCTTTACACAAAATAAATGAATCTCACAGACATCAAGATGAGTGAAAGAAtcccaaacggttgggattaccacaggtgtgagtcactgtgcccagccTCT----CTCTCCTTTTTGTttttttttgtttgtttgtttgtttgcttttttgagatggagtctcgttctgtcgcccaggctggtgtgcagtggcaccatcttggctcactacaagctccgcctcccgggttcacaccattctctcacctcagcctcccgagtagctgggactacaggcgcc i gorGor5.CYUI01015150v1 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5498749 5328 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=31232.000000 s hg38.chr19_GL383574v1_alt 94633 115 + 155864 cgccaccatgctcagctaatttttcgtatttttagtagagatggggtttcactgtgttagccaggatggtctcgatctcctgatcttgtgttccgcccaccttggcctcccaaag s panTro5.chr19 36163199 115 + 61309027 cgccaccatgctcagctaatttttcgtatttttagtagagatggggtttcactgtgttagccaggatggtctcgatctcctgatcttgtgttccgcccaccttggcctcccaaag i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6326916 115 - 8369475 cgccaccacactcggctaattttttgtatttttagtagagatggggtttcactgtgttagccaggatgatctcgatctcctgatcttgtgatccgcccaccttggcctcccaaag i gorGor5.CYUI01015150v1 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5498749 5328 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e panPan2.chr19 39909297 1626 + 64411610 I a score=158156.000000 s hg38.chr19_GL383574v1_alt 94748 296 + 155864 tggtgggattacaggcgtgagccaccgtgcccCACCCttttttttttttttttgagacggagttttggtcttgttgcccagga--tggagtgcaatggtgagatcttggctcattgcaacctccgtctcctgagttcaagcaattctcctgcctcagcctcccaa-gtagctgggattacaggcaccagccaccacgcctggctaatttttgtatttttagtagagatagggtttcaccacattgcccaggctggtctcgaactcctgacctcaggtgatctgcctgcctcgacctccg s panTro5.chr19 36163314 295 + 61309027 tggtgggattacaggcgtgagccaccgtgcccCACCC-tttttttttttttttgagacggagttttggtcttgttgcccagga--tggagtgcaatggtgagatcttggctcattgcaacctccgtctcctgagttcaagcgattctcctgcctcagcctcccaa-gtagctgggattacaggcaccagccaccacgcccggctaatttttgtatttttagtagagatagggtttcaccacattgcccaggctggtctcgaactcctgacctcaggtgatctgcctgcgtcgacctccg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910923 297 + 64411610 tggtgggattacaggcgtgagccaccgtgtccCTACC--Ctttttttttttttgagacggagttttggtcttgttgcccagggatgggagtgcaatggtgagatcttggctcattgcaacctccgtctcctgagttcaagcgattctcctgcctcagcctcccaacgtagctgggattacaggcaccggccaccacgcccagctaatttttgtatttttagtagagatagggtttcaccacattgcccaggctggtctcgaactcctgacctcaggtgatctgcctgcctcgacctccg i panPan2.chr19 I 1626 C 0 s gorGor5.CYUI01015150v1 6327031 294 - 8369475 tggtgggattacaggcgtgagccaccgtgcccCACCC--ttttttttttttttgagacggagttttggtcttgttgcccagga--tggagtgcaatggtgagatcttggctcattgcaacctccgtctcctgagttcaagcgattctcctgcctcagcctcccaa-gtagctgggattacaggtgccagccaccacgcccggctaatttttgtatttttagtagagatagggtttcaccacattgcccaggctggtctcgaactcctgacctcaggtgatctgcctgcctcgacctccg i gorGor5.CYUI01015150v1 C 0 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5498749 5328 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4632512 4015 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=3706.000000 s hg38.chr19_GL383574v1_alt 95044 6 + 155864 aaagCC s panTro5.chr19 36163609 6 + 61309027 aaagCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911220 6 + 64411610 aaagCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6327325 6 - 8369475 aaagCC i gorGor5.CYUI01015150v1 C 0 C 0 s canFam3.chr1 4636527 6 - 122678785 AGGGTT i canFam3.chr1 I 4015 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 365405 6745 + 643850 I e otoGar3.GL873654 5498749 5328 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=5252.000000 s hg38.chr19_GL383574v1_alt 95050 6 + 155864 TCTCTC s panTro5.chr19 36163615 6 + 61309027 TCTCTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911226 6 + 64411610 TCTCTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6327331 6 - 8369475 TCTCTC i gorGor5.CYUI01015150v1 C 0 C 0 s canFam3.chr1 4636533 6 - 122678785 TCTCCA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 372150 6 + 643850 tCTTCA i dasNov3.JH563638 I 6745 C 0 e proCoq1.NW_012149263v1 591827 3034 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e otoGar3.GL873654 5498749 5328 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=66180.000000 s hg38.chr19_GL383574v1_alt 95056 41 + 155864 TATATTTTTAAAGCCACCTGGCTCCCTTTCAATAAACCCAA s panTro5.chr19 36163621 41 + 61309027 TATATTTTTAAAGCCACCTGGCTCCCTTTCAATAAACCCAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911232 41 + 64411610 TATATTTTTAAAGCCACCTGGCTCCCTTTCAATAAACCCAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6327337 41 - 8369475 TATATTTTTAAAGCCACCTGGCTCCCTTTCAATAAACCCAA i gorGor5.CYUI01015150v1 C 0 C 0 s proCoq1.NW_012149263v1 594861 41 + 2501019 TATATTTTCAAGGCCATCTGGCTCCCTTCCAATAAGCCCAA i proCoq1.NW_012149263v1 I 3034 I 182 s canFam3.chr1 4636539 41 - 122678785 CGTATTTTTAGGGCTACGTGGCTCCCCTTCAGTCAGCCCAA i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 372156 41 + 643850 TATATTTTTAAGGCCACCTGGTTCCCTTTCAAAAAGCTCAA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3978676 1866 - 30143674 I e otoGar3.GL873654 5498749 5328 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=4274.000000 s hg38.chr19_GL383574v1_alt 95097 10 + 155864 TCTTGGTGA--t s panTro5.chr19 36163662 12 + 61309027 TCCTGGTGAttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911273 10 + 64411610 TCCTGGTGA--t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6327378 9 - 8369475 TCTTGGTGA--- i gorGor5.CYUI01015150v1 C 0 C 0 s canFam3.chr1 4636583 10 - 122678785 CATTGGTGA--T i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 372197 10 + 643850 AACTGTTGA--T i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 594902 182 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e otoGar3.GL873654 5498749 5328 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=546.000000 s hg38.chr19_GL383574v1_alt 95107 1 + 155864 t s panTro5.chr19 36163674 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911283 1 + 64411610 t i panPan2.chr19 C 0 C 0 s canFam3.chr1 4636593 1 - 122678785 T i canFam3.chr1 C 0 I 11 e proCoq1.NW_012149263v1 594902 182 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5498749 5328 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e gorGor5.CYUI01015150v1 6327387 0 - 8369475 C a score=88941.000000 s hg38.chr19_GL383574v1_alt 95108 160 + 155864 ttttttttttctagagacagagtctcactctgtcacccaggttggagtgcagtggtgcggtcatggctcactacagcctccactccctaagctcaagccatcctcctgcgtcagcctcccgagctaggatcacaggtgcgtgtcaccatgtctggctaat s panTro5.chr19 36163675 160 + 61309027 ttttttttttctagagacagagtctcactctgtcacccaggttggagtgcagtggcgcggtcatggctcactacagcctccactccctaagctcaagccatcctcctgcgtcagcctcccgagctaagatcacaggtgcgtgtcaccatgtctggctaat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911284 160 + 64411610 ttttttttttctagagacagagtctcactctgtcacccaggttggagtgcagtggcgcggtcatggctcactacagcctccactccctaagctcaagccatcctcctgcgtcagcctcccgagctaagatcacaggtgcatgtcaccatgtctggctaat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6327387 160 - 8369475 ttttttttttctagagacagagtctcactctgtcacccaggttggagtgcagtggcgtggtcatggctcactacagcctccactccctaagctcaagccatcctcctgcgtcagcctcccaagctgagatcacaggtgtgtgtcaccacgtctggctaat i gorGor5.CYUI01015150v1 C 0 C 0 e proCoq1.NW_012149263v1 594902 182 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5498749 5328 + 5549422 I e mm10.chr7 111116029 3720 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4636594 11 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=22879.000000 s hg38.chr19_GL383574v1_alt 95268 37 + 155864 ttactttttaattttgtagagacacggtctcactatg s panTro5.chr19 36163835 37 + 61309027 ttactttttaattttgtagagacacggtctcattatg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911444 37 + 64411610 ttactttttaattttgtagagacacggtctcactatg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6327547 37 - 8369475 ttactttttaattttgtagagacacggtctcactatg i gorGor5.CYUI01015150v1 C 0 C 0 s otoGar3.GL873654 5504077 34 + 5549422 TTTCTCCTTATATTTGTAAGGCCAA---CTGATTCTG i otoGar3.GL873654 I 5328 C 0 e proCoq1.NW_012149263v1 594902 182 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111116029 3720 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4636594 11 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=39865.000000 s hg38.chr19_GL383574v1_alt 95305 52 + 155864 tt------gccca--ggctgTCCTTGGCGATTCTTATAAGTATTGGTTGGTAGGAAGCT-----------------C s panTro5.chr19 36163872 52 + 61309027 tt------gccca--ggctgTCCTTGGCAATTCTTGTAAGTATTGGTTGGTAGGAAGCT-----------------C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911481 52 + 64411610 tt------gccca--ggctgTCCTTGGCAATTCTTGTAAGTATTGGTTGGTAGGAAGCT-----------------C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6327584 52 - 8369475 tt------gccca--ggcCGTCCTTGGCGATTCTTGTAAGTATTGGTTGGTAGGAAGCT-----------------C i gorGor5.CYUI01015150v1 C 0 C 0 s otoGar3.GL873654 5504111 73 + 5549422 TTCAGTAAGTCCA--AAC--TCCTTGGTGATTCTTGTAAGTATTGGCAGGTAGGAAGCTGAAAGCTAAGGCAATTCC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111119749 64 - 145441459 tt------acccactggccctcCTTA------TTTGTAAACATTAGTTGGAAGGAATCTCAGAGCCACAGTGATT-C i mm10.chr7 I 3720 C 0 e proCoq1.NW_012149263v1 594902 182 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4636594 11 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=110737.000000 s hg38.chr19_GL383574v1_alt 95357 124 + 155864 AAAGGTGGCTGCAAGTTTCACCAGCTCCCTGGGGTATCCTGATGGCTATCTCAGAACTGAATGG---TGTCAGACAGACTCGTTAGTTGCAGCGTA-GA---TGATCATGGTTCATTATTTTGCACTTTAA s panTro5.chr19 36163924 124 + 61309027 AAAGGTGGCTGCAAGTTTCACCAGCTCCCTGGGGTATCCTGATGGCTATCTCAGAACTGAATGG---TGTCACACAGACTCGTTAGTTGCAGCGTA-CA---TGATCATGGTTCATTATTTTGCACTTTAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911533 124 + 64411610 AAAGGTGGCTGCAAGTTTCACCAGCTCCCTGGGGTATCCTGATGGCTATCTCAGAACTGAATGG---TGTCACACAGACTCGTTAGTTGCAGCGTA-CA---TGATCATGGTTCATTATTTTGCACTTTAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6327636 124 - 8369475 AAAGGTGGCTGCAAGTTTCACCAACTCCCTGGGGTATCCTGATGGCTATCTCAGAACTGAATGG---TGTCACACAGACTCGTTAGTTGCAGCGTA-GA---TGATCATGGTTCATTACTTTGCACTTTAA i gorGor5.CYUI01015150v1 C 0 C 0 s otoGar3.GL873654 5504184 128 + 5549422 GAAGCTGGTTTTCCATTTCATCGGCTCCCTCAGGGCTCCTCACTGTTATCTCAGAATGCAGTGGTGCTGTTATACAGACTCACTTGTGGCAGGGCATCA---TGCTGGGGGCTCACTATTTTATACCATAC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111119813 117 - 145441459 TAAGGTGGCTTTAGGCTTCACTAATTCACTGTGAGCCCTTTA---------CGGAGCCAAATGG---TGTCCTGCAGACTCATTTCTTACAGTGTA-GAGACCGGTGGTAGTTAACTATCTTGTATCCAA- i mm10.chr7 C 0 C 0 s canFam3.chr1 4636605 124 - 122678785 AAAGGTGGCTGTTATTTTTGTCAGCTCCCTCTCAAGTCCTCACTGTTAGCTCAGACCTGGATGC---CCCTGCATCCCCTCCCTTGGTGCAGTGTA-GA--CTGATCATGTTTCA-TGTTGCACACTCTAC i canFam3.chr1 I 11 C 0 e proCoq1.NW_012149263v1 594902 182 + 2501019 I e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=81903.000000 s hg38.chr19_GL383574v1_alt 95481 46 + 155864 CAGCAATGTTTCATGATAGTGAAATAATTGTAGGTTAAGAGCCAAA s panTro5.chr19 36164048 46 + 61309027 CAGCAATGTTTCATGGTAGTGAAATAATTGTAGGTTAAGAGCCAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911657 46 + 64411610 CAGCAATGTTTCATGGTAGTGAAATAATTGTAGGTTAAGAGCCAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6327760 46 - 8369475 CAGCAATGTTTCATGGTAGTGAAATAATTGTAGGTTAAGAGCCAAA i gorGor5.CYUI01015150v1 C 0 C 0 s proCoq1.NW_012149263v1 595084 46 + 2501019 CAGCAGTGTTTTATGGCAGTGAAATAATTATAGCTTAAGAGCCAAA i proCoq1.NW_012149263v1 I 182 I 2 s otoGar3.GL873654 5504312 46 + 5549422 CAGCAGTGTTTCATGGTCATAAAATAATTGTAGGTCATGAGCCAAA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111119930 35 - 145441459 CAGCAA-----------AATCAAACCATTGCAGGTTAAGAGTCACT i mm10.chr7 C 0 C 0 s canFam3.chr1 4636729 46 - 122678785 CAGCGATGTCCCGCGCTAGTGAAATCATTGTAGGTTAAGAGCCAAA i canFam3.chr1 C 0 C 0 e micMur3.chr22 3978676 1866 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=127438.000000 s hg38.chr19_GL383574v1_alt 95527 53 + 155864 TTTTAGTTTATAAACTTAGTGTTTCCCTACATATTTTTTGTAACTTGGCTTAA s panTro5.chr19 36164094 53 + 61309027 TTTTAGTTTATAAACTTAGTGTTTCCCTACATATTTTTTGTAACTTGGCTTAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911703 53 + 64411610 TTTTAGTTTATAAACTTAGTGTTTCCCTACATATTTTTTGTAACTTGGCTTAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6327806 53 - 8369475 TTTTAGTTTATAAACTTAGTGTTTCCCTACATATTTTTTGTAACGTGGCTTAA i gorGor5.CYUI01015150v1 C 0 C 0 s micMur3.chr22 3980542 53 - 30143674 TTTTAGTTTACAAACTTAGCCTTTCCCAAAATATTTCTGGTCACTTAGCTTAA i micMur3.chr22 I 1866 C 0 s proCoq1.NW_012149263v1 595132 53 + 2501019 TTTTAGTTTATAAACTTAGCCTTTCCCGAAATATTTCTGGTAACTTAGCTTAA i proCoq1.NW_012149263v1 I 2 C 0 s otoGar3.GL873654 5504358 53 + 5549422 CTGTAGTTTATAAATTTAGCCTTTCCTGAAATATTTCTAGTAACTTAGCTTAA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111119965 53 - 145441459 TTTTTGTTTACAGACTTAGCGTTTCCCCAGATATTTCTCATAACTTGGCTCTA i mm10.chr7 C 0 C 0 s canFam3.chr1 4636775 53 - 122678785 TCTTAGGGTATAAACGCAGCCTTTCCCCAAATATTTCTAATAACTTGGCTTAA i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 372207 0 + 643850 C e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=5096.000000 s hg38.chr19_GL383574v1_alt 95580 2 + 155864 AA s panTro5.chr19 36164147 2 + 61309027 AA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911756 2 + 64411610 AA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6327859 2 - 8369475 AA i gorGor5.CYUI01015150v1 C 0 C 0 s micMur3.chr22 3980595 2 - 30143674 AA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 595185 2 + 2501019 AA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5504411 2 + 5549422 AA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111120018 2 - 145441459 AA i mm10.chr7 C 0 I 528 e dasNov3.JH563638 372207 0 + 643850 C e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4636828 0 - 122678785 C e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=9744.000000 s hg38.chr19_GL383574v1_alt 95582 5 + 155864 ATGTT s panTro5.chr19 36164149 5 + 61309027 ATGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911758 5 + 64411610 ATGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6327861 5 - 8369475 ATGTT i gorGor5.CYUI01015150v1 C 0 C 0 s micMur3.chr22 3980597 5 - 30143674 ATGTT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 595187 5 + 2501019 ATGTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5504413 5 + 5549422 ATGTT i otoGar3.GL873654 C 0 C 0 e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111120020 528 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4636828 0 - 122678785 C e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=910.000000 s hg38.chr19_GL383574v1_alt 95587 1 + 155864 A s panTro5.chr19 36164154 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911763 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6327866 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s proCoq1.NW_012149263v1 595192 1 + 2501019 A i proCoq1.NW_012149263v1 C 0 I 2 e micMur3.chr22 3980602 0 - 30143674 C e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5504418 0 + 5549422 C e mm10.chr7 111120020 528 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4636828 0 - 122678785 C e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=20013.000000 s hg38.chr19_GL383574v1_alt 95588 35 + 155864 TATGGGGAccaggcgtagtggctgggctaggcgcg s panTro5.chr19 36164155 35 + 61309027 TATGGGGAccaggcgtagtggctgggctaggcgcg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911764 35 + 64411610 TATGGGGAccaggcgtagtggctgggctaggcgcg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6327867 35 - 8369475 TATGGGGACCAGGCGTAGTGGCTGggctaggcacg i gorGor5.CYUI01015150v1 C 0 C 0 e proCoq1.NW_012149263v1 595193 2 + 2501019 I e micMur3.chr22 3980602 0 - 30143674 C e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5504418 0 + 5549422 C e mm10.chr7 111120020 528 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4636828 0 - 122678785 C e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=98703.000000 s hg38.chr19_GL383574v1_alt 95623 366 + 155864 gtggctcacgcctgtaatcccagcactttgggaggccaaggtgggcggatcatgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaattagccaggcatggtggcgggcaactatagtcctagctactcgtgaggctgaggcaggagaatggtgtgaaccctggaggcggagcttgcagtgagccaagatcatgccactgcactccagcctgggcgacagagcgagactccatctc--------aaaaaaaaaaagctgggtgcagtggtagtcccagatactcgggaagctgagtcaggagaatcacttgaacccgggaggcagaggttgcaatgagc s panTro5.chr19 36164190 372 + 61309027 gtggctcatgcctgtaatcgcagcactttgggaggccaaggtgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaattagccaggcatggtggcgggcgactatagtcctagctactcgtgaggctgaggcaggagaatggcgagaacccgggaggcggagcttgcagtgagccaagatcatgccactgcactccagcctgggcgacagagcgagactccatctc--aaaaaaaaaaaaaaaaagctgggtgcagtggtagtcccagatactcgggaagctgagtcaggagaatcgcttgaactcaggaggcagaggttgcaatgagc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39911799 373 + 64411610 gtggctcatgcctgtaatcgcagcactttgggaggccaaggtgggcggatcacgaagtcaggagatcgagaccatcctggctaacacagtgaaaccccgtctctactaaaaatacaaaaaaattagccaggcatggtggcgggcgactatagtcctagctactcgtgaggctgaggcaggagaatggcgagaacccgggaggcggagcttgcagtgagccaagatcatgccactgcactccagcctgggc-acagagcgagactccatctacaaaaaaaaaaaaaaaaacgctgggtgcagtggtagtcccagatactcgggaagctgagtcaggagaatcgcttgaactcaggaggcagaggttgcaatgagc i panPan2.chr19 C 0 I 1161 e proCoq1.NW_012149263v1 595193 2 + 2501019 I e micMur3.chr22 3980602 0 - 30143674 C e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5504418 0 + 5549422 C e mm10.chr7 111120020 528 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4636828 0 - 122678785 C e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e gorGor5.CYUI01015150v1 6327902 0 - 8369475 C a score=6096.000000 s hg38.chr19_GL383574v1_alt 95989 67 + 155864 cgatatcatgccactacactccagcctaggcaacagagtgagactccgtctcaaaaaaaaaaaaaaa s panTro5.chr19 36164562 67 + 61309027 tgatatcatgccactacactccagcctgggcaacagagtgagactccgtctcaaaaaaaaaaaaaaa i panTro5.chr19 C 0 I 2 e proCoq1.NW_012149263v1 595193 2 + 2501019 I e micMur3.chr22 3980602 0 - 30143674 C e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5504418 0 + 5549422 C e mm10.chr7 111120020 528 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4636828 0 - 122678785 C e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e gorGor5.CYUI01015150v1 6327902 0 - 8369475 C e panPan2.chr19 39912172 1161 + 64411610 I a score=0.000000 s hg38.chr19_GL383574v1_alt 96056 312 + 155864 GTTATATGGGGTAgggcatggtggctcatacctgtaatctcagcactttgggagtttaaggcaggagggtcacttgagcccaggagtttgcgaccaacctgggcaacacagcgaaacctcatctctacaaaaaattaaaaaattagccagacatggcaatgtgcacctgtagtcccagctactttggaaggtgaggtgagaagattacttgagcccaggaggttgaggctgcagtgagccataatcattccagcctgggcgacaaaggaagaccctgtctcTCAAAATAATAATAAATGTTggccgggcgca e proCoq1.NW_012149263v1 595193 2 + 2501019 I e micMur3.chr22 3980602 0 - 30143674 C e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5504418 0 + 5549422 C e mm10.chr7 111120020 528 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4636828 0 - 122678785 C e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e gorGor5.CYUI01015150v1 6327902 0 - 8369475 C e panPan2.chr19 39912172 1161 + 64411610 I e panTro5.chr19 36164629 2 + 61309027 I a score=25662.000000 s hg38.chr19_GL383574v1_alt 96368 283 + 155864 gtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcacgaggtcaggagatcgagaccgtcctggctaacacagtgaaaccccgtttctactaaaaataccaaaattagccgggcgtggttgcaggcgcctgtaatcccagttactcaggaggctgaggcaggagaatggcctgaacccgggaggtggagctcgcagtgagccgagatcatgccactgcactccagcctgggcgacagagcgagactctgtctcaaaaaaaaaaaaaa---- s gorGor5.CYUI01015150v1 6327902 287 - 8369475 gtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcacgaggtcaggagatcgagaccgtcctggctaacacggtgaaaccctgtctctactaaaaataccaaagttagccgggcgtggttgcaggcgcctgtaatcccagttactcaggaggctgaggcaggagaatggcctgaacgcaggaggtggagctcgcagtgagccgagatcatgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 e proCoq1.NW_012149263v1 595193 2 + 2501019 I e micMur3.chr22 3980602 0 - 30143674 C e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5504418 0 + 5549422 C e mm10.chr7 111120020 528 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4636828 0 - 122678785 C e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e panPan2.chr19 39912172 1161 + 64411610 I e panTro5.chr19 36164629 2 + 61309027 I a score=3876.000000 s hg38.chr19_GL383574v1_alt 96651 14 + 155864 gaaagaaaaaTAAT s panTro5.chr19 36164631 14 + 61309027 gaaagaaaaaTAAT i panTro5.chr19 I 2 C 0 s gorGor5.CYUI01015150v1 6328189 14 - 8369475 gaaagaaaaaTAAT i gorGor5.CYUI01015150v1 C 0 C 0 e proCoq1.NW_012149263v1 595193 2 + 2501019 I e micMur3.chr22 3980602 0 - 30143674 C e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5504418 0 + 5549422 C e mm10.chr7 111120020 528 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4636828 0 - 122678785 C e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e panPan2.chr19 39912172 1161 + 64411610 I a score=3315.000000 s hg38.chr19_GL383574v1_alt 96665 7 + 155864 AAATGTG s panTro5.chr19 36164645 7 + 61309027 AAATGTG i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6328203 7 - 8369475 AAATGTG i gorGor5.CYUI01015150v1 C 0 C 0 s canFam3.chr1 4636828 7 - 122678785 AACTGTG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 595193 2 + 2501019 I e micMur3.chr22 3980602 0 - 30143674 C e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5504418 0 + 5549422 C e mm10.chr7 111120020 528 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e panPan2.chr19 39912172 1161 + 64411610 I a score=2169.000000 s hg38.chr19_GL383574v1_alt 96672 3 + 155864 ATA s panTro5.chr19 36164652 3 + 61309027 ATA i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6328210 3 - 8369475 ATA i gorGor5.CYUI01015150v1 C 0 C 0 s micMur3.chr22 3980602 3 - 30143674 ATT i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5504418 3 + 5549422 ATT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4636835 3 - 122678785 ATT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 595193 2 + 2501019 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111120020 528 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e panPan2.chr19 39912172 1161 + 64411610 I a score=319138.000000 s hg38.chr19_GL383574v1_alt 96675 297 + 155864 TGGTTCTGCTCAGCTTTGCCCCTAAATGGAAGGCATGAGTGCTCGGCAGCTGTGTAGGTGAGGGTTAAGGTGGGACA------TGGCAGGCAGTGAGAGAAGATTAGGAGTTTGGACCCTGAGC---TGATCTCTCCCTGTGGAGTGAATGGGG-------AAGAGAGACTCCTTTCACTGCACAC----CACTCACACACTGCTCCCTGACCCGGCCAGGAAGCATG--TCCCTGCCTTCCACAC---GGAGGCAGCCAGCCA----TCTCATGAACAGGAGTCTGTTGTGCGTGGTCTTGCCATCCAGCACCTACACTGAACAT s panTro5.chr19 36164655 301 + 61309027 TGGTTCTGCTCAGCTTTGCCCCTAAATGGAAGGCATGAGTGCTCGGCAGCTGTGTAGGTGAGGGTTAAGGTGAGACA------TGGCAGGCAGTGAGAGAAGATTAGGAGTTTGGACCCTGAGC---TGATCTCTCCCTGTGGAGTGAATGGGG-------AAGAGAGACTCCTTTCACTGCACAC----CACTCACACACTGCTCCCTGACCCGGCCAGGAAGCATG--TCCCTGCCTTCCACAC---GGAGGCAGCCAGCCAGCCATCTCATGAACAGGAGTCTGTTGTGCGTGGTCTTGCCATCCAGCACCTACACTGAACAT i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6328213 297 - 8369475 TGGTTCTGCTCAGCTTTGCCCCTAAATGGAAGGCATGAATGCTCGGCAGCTGTGTAGGTGAGGGTTAAGGTGAGACA------TGGCAGGCAGTGAGAGAAGATTAGGAGTTTGGACCCTGAGC---TGATCTCTCCCTGTGGAGTGAATGGGG-------AAGAGAGACTCCTTTCACTGCACAC----CACTCACACACTGCTCCCTGACCCGGCCAGGAAGCATG--TCCCTGCCTTCCACAC---GGAGGCAGCCAGCCA----TCTCATGAACAGGAGTCTGTTGTGCGTGGTCTTGCCATCCAGCACCAACACTGAACAT i gorGor5.CYUI01015150v1 C 0 C 0 s micMur3.chr22 3980605 297 - 30143674 TGGTTCAGCTCGGCTTTGTCCCTACATGGAAGGCACGAGTACTTGGCAGCTGCTTGGGTTAGGGTTAAGGTTGGACACAGCAGTGTCAGGCAGTGTCAGAGGGCTGGGGGTTTGGGCCTTGGCT---TGCTCTTTCCCCGTGGAGTGAGCAGGG-------AGCAGACACTCCTGTCACTGCGCAC----CACTCACACACTGCTCTCTGGCCTGGCTGGGACACCTGGGTTCC--------ACAC---AGAGGCAGCCAGCTG----TCTGGGGAAGGGGAGTCTGTCGTGTGTGGTCCTGCCATCTGGTACCTGCATCAAACAG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 595195 299 + 2501019 TGGTTCGGCTCAGCTTTGCCCCTAAATGGAAGGCATGCGTACTTGGCAGCGGCGTAGCTTAGGGTTAAGGTTGGACGCAGCAGTGCCAGGCGGTGTGAGGAGGGTAGGTGTTTGGGCCCTGAGC---TGATCTCTCCCCGTGGAGTGAGCAGGG-------AGCAGACACTCCTGTCACTGCGCAC----CACTCACACACTGCCATCCGGCCTGGCTGGGACATCTGGGTCCCTGCAT--TCCAC---GGAGGCAGCC----G----TCTGGGGAAGGGGAGTCTGTTGTGTGTGGTCCTGCCGTCCGGCACCTGCACCAGACAG i proCoq1.NW_012149263v1 I 2 C 0 s otoGar3.GL873654 5504421 270 + 5549422 TGGTTCAGCTCAGCTTTGCCCCTAAATGGAAGGCATGAGTCGTCGGCAGCTATGTAGGTTAAGATTAAGGT----CACAGCAGTGCCAGGCAGTGTGAGAAGCCTTGGCGTTTGGGCCCTGAGC---TGCTATCTCCCCGTGGAGTGAGTCGGG-------AGCAGACACTGCTTTCACTCCTCAC----CACTTACACACTGTTCTCTGACCTGACTAGGACATCTGGCTCCCTATATCCTACAC---AGAGGCAGCCAGCTA----TCTGATGAGGTAGAGTGTGCTGTGTCT------------------------------- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4636838 301 - 122678785 TGGTTCTGCCCAGCTTTGCCCCTAAATGGAAGACACAAGAACTTGGCAGCTGTGCGGCTTAGGGTTAAGGTCAGGTGCAACACTGCGGGGCAGTG--AGAGGCCTGGGAGTCTGGGCCCTGCGCCCATCATCTCTCCCCGGGGGGCCAGGGGGGCTGCGCAGGGAGAGACCCCTCTGACCTCTCTCATCACGCTGACACCCTGCCCTCC-ACCCGGCTGGGACAGCTG----CCCGCCCGTGGCGCCCGGGAAGCGGCC-GCCG----TCTGATG-------------CTCGTGTGGCCCTGGTCCCCAGCACCTGCATCCGGCAG i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111120020 528 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e panPan2.chr19 39912172 1161 + 64411610 I a score=142671.000000 s hg38.chr19_GL383574v1_alt 96972 115 + 155864 GAGCTGAGTGGGTGTCCCA-GGCCTCCCTGGGAGGGA-------------ATCCAGGC--TGCAGCCAGTTCCTCAGGTTGCACAAGTGGCTGGTCACATTGCCACCAGAAACTCAGCCAGTGGCAGCTTT s panTro5.chr19 36164956 115 + 61309027 GAGCTGAGTGGGTGTCCCA-GGCCTCCCTGGGAGGGA-------------ATGCAGGC--TGCAGCCAGTTCCTCAGGTTGCACAAGTGGCTGGTCACATTGCCACCAGAAACTCAGCCAGTGGCAGCTTT i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6328510 115 - 8369475 GAGCTGAGTGGGTGTCCCA-GGCCTCCCTGGGAGGGA-------------ATCCAGGC--TGCAGCCAGTTCCTCAGGTTGCACAAGTGGCTGGTCACATTGCCACCAGAAACTCAGCCAGTGGCAGCTTT i gorGor5.CYUI01015150v1 C 0 C 0 s micMur3.chr22 3980902 111 - 30143674 GAGC----TAGGTGTCCCCAGGCCGCT-TGGAAGGGA-------------GTCCAGGC--TGTGACCCGTTCCCTAGGTTGCACACATGGCTGGTCACATCGCCACCGGAAACTCAGCCAGTGGCAGCTTT i micMur3.chr22 C 0 I 236 s proCoq1.NW_012149263v1 595494 110 + 2501019 GAGC----TAGGTGTCCCC-GGCCTCT-TGGGAGGGA-------------GTCCAGGC--TGTGACCAGTTCCCCAGGTTGCACACGTGGCTGGTCACATCGCCACCAGAAACTCAGCCAGTGGCAGCTTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5504691 111 + 5549422 GAGC----CAGGTGTCCCA-AGCCTCTGCGGGAGGGA-------------GTCCAGGC--TGTGACTGGTTTTCCAGGTTGTTCAAGTGGCTGCTAACATTGCCACCAGAAGCTCAGCTAGCGGCAGCTTT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111120548 125 - 145441459 GGATTGGTTTGGTGTCCCA-GGCCAACTTGGGAAGGAGTTGAAGGTTCAGGTCCAGACATTGTAACCAGTACCCAAGTT---ACAGCTAG--AGTCACGTTGCCATCAGCAACTCAGCCAATGGCAACTTT i mm10.chr7 I 528 I 1 s canFam3.chr1 4637139 95 - 122678785 GAGT----GGAGTATCCCC-CCTCCCTTGGGAAGGGA-------------GGCTGGGCTCTGTGACCCGTCCCCAGGGTCTCAGGAGTCAC------CATCACC-CTAGAAACACAGTTG----------- i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 372207 0 + 643850 C e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e panPan2.chr19 39912172 1161 + 64411610 I a score=1365.000000 s hg38.chr19_GL383574v1_alt 97087 1 + 155864 A s panTro5.chr19 36165071 1 + 61309027 A i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6328625 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s proCoq1.NW_012149263v1 595604 1 + 2501019 A i proCoq1.NW_012149263v1 C 0 I 218 s otoGar3.GL873654 5504802 1 + 5549422 A i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4637234 1 - 122678785 A i canFam3.chr1 C 0 C 0 e micMur3.chr22 3981013 236 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111120673 1 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e panPan2.chr19 39912172 1161 + 64411610 I a score=6855.000000 s hg38.chr19_GL383574v1_alt 97088 8 + 155864 CAATCTCT s panTro5.chr19 36165072 8 + 61309027 CAATCTCT i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6328626 8 - 8369475 CAATCTCT i gorGor5.CYUI01015150v1 C 0 C 0 s otoGar3.GL873654 5504803 8 + 5549422 CTGTCTCT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111120674 8 - 145441459 CTATCCCT i mm10.chr7 I 1 I 407 s canFam3.chr1 4637235 8 - 122678785 CTGCCCCT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 595605 218 + 2501019 I e micMur3.chr22 3981013 236 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e panPan2.chr19 39912172 1161 + 64411610 I a score=7219.000000 s hg38.chr19_GL383574v1_alt 97096 14 + 155864 GTCTGCTAGTGATT s panTro5.chr19 36165080 14 + 61309027 GTCTGCTAGTGATT i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6328634 14 - 8369475 GTCTGCTAGTGATT i gorGor5.CYUI01015150v1 C 0 C 0 s otoGar3.GL873654 5504811 14 + 5549422 GCTTGCTAGCAATC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4637243 14 - 122678785 GCTCACGGGCGACT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 595605 218 + 2501019 I e micMur3.chr22 3981013 236 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111120682 407 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e panPan2.chr19 39912172 1161 + 64411610 I a score=3669.000000 s hg38.chr19_GL383574v1_alt 97110 9 + 155864 GAAGATTCA s panTro5.chr19 36165094 9 + 61309027 GAAGATTCA i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6328648 9 - 8369475 GAAGATTCA i gorGor5.CYUI01015150v1 C 0 C 0 s canFam3.chr1 4637257 9 - 122678785 CAAGACCCA i canFam3.chr1 C 0 I 41 e proCoq1.NW_012149263v1 595605 218 + 2501019 I e micMur3.chr22 3981013 236 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5504825 0 + 5549422 C e mm10.chr7 111120682 407 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e panPan2.chr19 39912172 1161 + 64411610 I a score=169179.000000 s hg38.chr19_GL383574v1_alt 97119 650 + 155864 GTTGAggccgtgcacagtggctcacgcctgtaatgccagcactttgggaagccaaggcaggtggaccatttgaggtcaggagtttcagatcagccgggtgaatatgatgaaacctcatctctactgaaaatacacaaaaattagccagacgtggtggcacgagcctgtaatcccagctacacgggaggctgaggcaggagaattgcttgaacctgg------gaggcagaggcagagccgagatcatgccactgcactccagcctgggagacagagcaagactctgtcttaaaaaaaaaaaaaaaaaaaggaagaagaaGATGATGATTCAggctgggtgctgtggctcacgcctgcaatcccaacactttgggaggccgaggtgggcatatcgcctgaggtgaggagttcgagagcagccaggccagcatggtgaaactctgtctctactaaaaatacagaaaaaaatttccaggcatggtcgtgggtgcctgtaattccagctactcgggaggctgaggcaggagaatcgcttgaccctgggaggtgaaggttgcagtgagccaagactgcaccactgcactctagactgggtaacagagcaagactccatctcaaaaaaaaaaaaaaagaagaa-gaagaagaagaggaagagg s panTro5.chr19 36165103 628 + 61309027 GTTGAggccgtgcacagtggctcacgcctataatgccagcactttgggaagccaaggcaggcggaccacttgaggtcaggggtttcagatcagccgggcgaatatgatgaaacctcatctctactgaaaatacacaaaaattagccagacgtggtggcacgagcctgtaatcccagctacacgggaggctgaggcaggagaattgcttgaacctgg------gaggcagaggcagagccgagatcatgccactgcactccagcctgggagacagagcaagactctgtcttaaaaaaaaaaaaaaaa---ggaagaagaaGATGATGATTCAggccaggtgctgtggctcacgcctgcaatcccaacactttgggaggccgaggtgggcatatcgcctgaggtgaggagttcgagagcagccaggccagcatggtgaaactctgtctctactaaaaatacagaaaaaaatttccaggcatggtcgtgggtgcctgtaattccagctactcaggaggctgaggcaggagaatcgcttgaccctgggaggtgaaggttgcagtgagccaagactgcaccactgcactctagactgggtaacagagcaagactccatctcaaaaaaaaaaaaaaaaaaaaa-------------------- i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6328657 653 - 8369475 GTTGAggccgtgcacagtggctcac-cctgtaatgccagcactttgggaagccaaggcaggcggaccacttgaggtcaggagtttcagatcagccgggcgaatatgatgaaacctcatctctactgaaaatacacaaaaattagccagacgtggtggcacgagcctgtaatcccagctacacgggaggctgaggcaggagaattgcttgaacctggaaggaagaggcagaggcagagccgagatcatgccactgcactccagcctgggagacagagcaagactctgtcttaaaaaaaaaaaaaaag--aagaagaaGATGATGATGATTCAggccgggtgctgtggctcacgcctgcaatcccaacactttgggaggccgaggcaggcatatcgcctgaggtgaggagttcgagagcagccaggccagcatggtgaaactctgtctctactaaaaatacaaaaaaaaatttccaggcatggtcgtgggtgcctgtaattccagctactcgggaggctgaggcaggagaatcgcttgaccctgggaggtgaaggttgcagtgagccaagactgcaccactgcactctagactgggtaacag-tctgcactccatctcaaaaaaaaaaaaaaaaaaaaaagaagaagaagaggaagagg i gorGor5.CYUI01015150v1 C 0 C 0 e proCoq1.NW_012149263v1 595605 218 + 2501019 I e micMur3.chr22 3981013 236 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5504825 0 + 5549422 C e mm10.chr7 111120682 407 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4637266 41 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C e panPan2.chr19 39912172 1161 + 64411610 I a score=14242.000000 s hg38.chr19_GL383574v1_alt 97769 38 + 155864 aagaagaggaagaggaagaggaagaagaagaagaacaa s panTro5.chr19 36165731 34 + 61309027 aagaagaagaagaggaagaggaagaagaagaaga---- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913333 38 + 64411610 aagaagaagaagaggaagaagaagaagaagaagaacaa i panPan2.chr19 I 1161 C 0 s gorGor5.CYUI01015150v1 6329310 34 - 8369475 aagaagaagaacaagaacaagaagaacaagaaga---- i gorGor5.CYUI01015150v1 C 0 C 0 e proCoq1.NW_012149263v1 595605 218 + 2501019 I e micMur3.chr22 3981013 236 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5504825 0 + 5549422 C e mm10.chr7 111120682 407 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4637266 41 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=28947.000000 s hg38.chr19_GL383574v1_alt 97807 56 + 155864 gaagaTTCAGTTGAGATGTGCAGACTGG-------TAGGAGCTATCACATAT-AAAAAATA-----TCT s panTro5.chr19 36165765 51 + 61309027 -----TTCAGTTGAGATGTGCAGACTGG-------TAGAAGCTATCACATAT-AAAAAATA-----TCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913371 57 + 64411610 gaagaTTCAGTTGAGATGTGCAGACTGG-------TAGAAGCTATCACATNTAAAAAAATA-----TCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6329344 52 - 8369475 -----TTCAGTTGAGATGTGCAGACTGG-------TAGCAGCTATCACATATAAAAAAATA-----TCT i gorGor5.CYUI01015150v1 C 0 C 0 s otoGar3.GL873654 5504825 68 + 5549422 GAAGATTGAAAGGCAATGCCTAGACTAGCCCAGACTAGAAGCAACCATATGT-AAAAAACAAAATCGCT i otoGar3.GL873654 C 0 I 3 e proCoq1.NW_012149263v1 595605 218 + 2501019 I e micMur3.chr22 3981013 236 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111120682 407 - 145441459 I e chlSab2.chr6 29288857 6 + 50890351 I e canFam3.chr1 4637266 41 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e colAng1.NW_012111697v1 2353727 2 + 4274983 I e manLeu1.NW_012102454v1 917278 6 - 2385121 I e cerAty1.NW_012005268v1 5483005 6 + 7714307 I e macNem1.NW_012011689v1 4554545 34 - 13342542 I e macFas5.chr19 34685860 1 + 59248254 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=483346.000000 s hg38.chr19_GL383574v1_alt 97863 121 + 155864 gccaggtgcggtggctcatgcctctaatctcagcactttgggaggccaagatgggcagatcacttgtggtcaggaattcaagaccagcctgctggc---caacatggtgaaaccctgta---ctaag s panTro5.chr19 36165816 121 + 61309027 gccaggtgcggtggctcatgcctctaatctcagcactttgggaggccaagatgggcagatcacctgtggtgaggaattcaagaccagcctgctggc---caacatggtgaaaccctgta---ctaag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913428 121 + 64411610 gccaggtgcggtggctcatgcctctaatctcagcactttgggaggccaagatgggcagatcacctgtggtcaggaattcaagaccagcctgctggc---caacatggtgaaaccctgta---ctaag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6329396 124 - 8369475 gccaggtgtggtggctcatgcctctaatctcagcactttggggggccaagatgggcagatcacttgtggtcaggaattcaagaccagcctgctggccaacaacatggtgaaaccctgta---ctaag i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34685861 121 + 59248254 gccaggcacggtggctcacgcctgtaatcccagcacttttggaggctgcggcgggcagatcacttgtggtcaggagttcgagaccagcctgctggc---caacagggtgaaaccctgta---ctaag i macFas5.chr19 I 1 C 0 s macNem1.NW_012011689v1 4554579 121 - 13342542 gccaggcacggtggctcacgcctgtaatcccagcacttttggaggctgcggcgggcagatcacttgtggtcaggagttcgagaccagcctgctggc---caacagggtgaaaccctgta---ctaag i macNem1.NW_012011689v1 I 34 C 0 s cerAty1.NW_012005268v1 5483011 121 + 7714307 gccaggcgcggtggctcacacctgtaatcccagcacatttggaggctgaggcgggcagatcacttgtggtcaggagttcgagaccagcctgctggc---caacagggtgaaaccctgta---ctaag i cerAty1.NW_012005268v1 I 6 C 0 s chlSab2.chr6 29288863 121 + 50890351 gccaggcacggtggctcatgcccgtaatcccagcacttttggaggctgaggcgggcagatcacttgtggtcaggagttcgagaccagcctgctggc---caacagggtgaaaccctgta---ctaag i chlSab2.chr6 I 6 C 0 s manLeu1.NW_012102454v1 917284 121 - 2385121 gccaggcgcggtggctcacgcctgtaatcccagcacatttggaggctgaggcgggcagatcacttgtggtcaggagtttgagaccagcctgctggc---caacagggtgaaaccctgta---ctaag i manLeu1.NW_012102454v1 I 6 C 0 s colAng1.NW_012111697v1 2353729 121 + 4274983 gccaggcgtggtggctcatgcttgtaatcccagcacttttggaggctgaggggggcagatcacttgtggtcaggagtttgagaccagcctgctggt---caacagggtaaaaccctgta---ctaag i colAng1.NW_012111697v1 I 2 C 0 s otoGar3.GL873654 5504896 105 + 5549422 gccaggcacagtggctcatgcctgtaatactagcaccctgggaggccaaggtggatggattccctg--------------agaccagc---ctgag---ctagagagagagaccctccatctcca-- i otoGar3.GL873654 I 3 C 0 e proCoq1.NW_012149263v1 595605 218 + 2501019 I e micMur3.chr22 3981013 236 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111120682 407 - 145441459 I e canFam3.chr1 4637266 41 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e rheMac8.chr19 30232975 404 + 53671032 I e nomLeu3.chr10 63918901 0 - 106955855 C a score=873227.000000 s hg38.chr19_GL383574v1_alt 97984 179 + 155864 tacaaaaa-ttagctgggtgtggtggtgggtgcctgtaatcccagctactc--------------------gcaaggctgaggcaggagaatcgcttga-------------------------------------------------------acctgaaaggcagaggttgcaataa-----gatgagatcactgcactccagccttggtgacacagcaagactccatctc-aaaaaataagaataaaaaTAAG----TAAAT s panTro5.chr19 36165937 179 + 61309027 tacaaaaa-ttagctgggtgtggtggcgggtgcctgtaatcccagctactc--------------------gcaaggctgaggcaggagaatcgcttga-------------------------------------------------------acctgaaaggcagaggttgcaatga-----gatgagatcactgcactccagccttggtgacacagcaagactccatctc-aaaaaataaggataaaaaTAAG----TAAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913549 179 + 64411610 tacaaaaa-ttagctgggtgtggtggcgggtgcctgtaatcccagctactc--------------------gcaaggctgaggcaggagaatcgcttga-------------------------------------------------------acctgaaaggcagaggttgcaatga-----gatgagatcactgcactccagccttggtgacacagcaagactccatctc-aaaaaataaggataaaaataag----taaat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6329520 179 - 8369475 tgcaaaaa-ttagctgggtgtggtggcgggtgactgtaatcccagctactc--------------------gcaaggctgaggcaggagaatcgcttga-------------------------------------------------------acctgaaaggcagaggttgcaatga-----gatgagatcactgcactccagccttggtgacacagcaagactccatctc-aaaaaataagaatacaaataag----taaat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63918901 178 - 106955855 tacaaaaatttagctgggtgtggtggcgggtgcctgtaatcccagctactt--------------------gcaaggctgaggcaggagaatcgcttga-------------------------------------------------------acctgaaaggcagaggttgcagtga-----gatgagatcactgctctccagccttggtgacagagcaaggctccatctc-aaaaaataaaaat--aagtaaa----taaat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34685982 204 + 59248254 tacaaaaa-ttagctgggtgtggtggcaggtgcctgtaatcccagctactcagcaaaatcccagctactcagcaaggctgaggcaggagaatcacttga-------------------------------------------------------acctgaaaggcagaggttgcagtga-----gatgagatcactgcactccagcctgggtgacagagcaagactccatctcaaaaaaataaaaataaaaataagtaaataaAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4554700 184 - 13342542 tacaaaaa-ttagctgggtgtggtggcaggtgcctgtaatcccagctactc--------------------gcaaggctgaggcaggagaatcacttga-------------------------------------------------------acctgaaaggcagaggttgcagtga-----gatgagatcactgcactccagcctgggtgacagagcaagactccatctcaaaaaaataaaaataaaaataagtaaataaat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483132 183 + 7714307 tacaaaaa-ttagctgggtgtggtggcaggtgcctgtaatcccagctactc--------------------gcaaggctgaggcagg-gaatcacttga-------------------------------------------------------acctgaaaggcagaggttgcagtga-----gatgagatcactgcactccagcctgggtgacagagcaaggctccatctcaaaaaaataaaaataaaaataagtaaataaat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29288984 184 + 50890351 tacaaaaa-ttagctgggtgtggtggcaggtgcctgtaatcccagctactc--------------------gcaaggctgaggcaggagaatcacttga-------------------------------------------------------acctgaaaggcagaggttgcagtga-----gatgagatcactgcactccagcctgggtgacagagcaagactccatctcaaaaaaataaaaataaaaataagtaaataaAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 917405 184 - 2385121 tacaaaaa-ttagctgggtgtggtggcaggtgcctgtaatcccagctactc--------------------gcaaggctgaggcaggagaatcacttga-------------------------------------------------------acctgaaaggcagaggttgcagtga-----gatgagatcactgcactccagcctgggtgacagagcaagactccatctcaaaaaaataaaaataaaaataagtaaataaat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2353850 184 + 4274983 tacaaaaa-ttagctgggtgtggtggcaggtgcctgtaatcccagctactc--------------------tgaaggctgaggcaggagaatcacttga-------------------------------------------------------acctgaaaggcagaggttgcagcga-----gatgagatcactgcactccagcctgggtgacagagcaagattccatctcaaaaaaacaaaaataaaaataagtaaataaat i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5505001 221 + 5549422 ctaaaaaa-ccagctgggtgttgtggcaggtgcctgtagttccagctactc--------------------gccaggctgaggcaggagggttgcttggtagggggataggtgggggtcactgtgtgtgacacacttcttggggggtgggatacaattataagtttgaggttgctgtgagctatgatgatgctatggcaccctacccagggctgcagagtgagactctgtccc-aCCCCCTAA---------------------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 595605 218 + 2501019 I e micMur3.chr22 3981013 236 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111120682 407 - 145441459 I e canFam3.chr1 4637266 41 - 122678785 I e aotNan1.NW_018505377v1 385021 585 - 4471408 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e saiBol1.JH378197 5427444 0 + 8899380 C e calJac3.chr22 28585253 1 + 49145316 I e rheMac8.chr19 30232975 404 + 53671032 I a score=51675.000000 s hg38.chr19_GL383574v1_alt 98163 7 + 155864 AAATAAA s panTro5.chr19 36166116 7 + 61309027 AAATAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913728 7 + 64411610 aaaTAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6329699 7 - 8369475 aaaTAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63919079 7 - 106955855 aaaTAAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34686186 7 + 59248254 AAATAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4554884 7 - 13342542 aaataaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483315 7 + 7714307 aaataaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289168 7 + 50890351 AAATAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 917589 7 - 2385121 aaataaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354034 7 + 4274983 aaataaa i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5427444 7 + 8899380 AAATAAA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 385606 7 - 4471408 aaataaa i aotNan1.NW_018505377v1 I 585 C 0 s otoGar3.GL873654 5505222 3 + 5549422 ----AAA i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 595605 218 + 2501019 I e micMur3.chr22 3981013 236 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111120682 407 - 145441459 I e canFam3.chr1 4637266 41 - 122678785 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e calJac3.chr22 28585253 1 + 49145316 I e rheMac8.chr19 30232975 404 + 53671032 I a score=9555.000000 s hg38.chr19_GL383574v1_alt 98170 1 + 155864 A s panTro5.chr19 36166123 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913735 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6329706 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63919086 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34686193 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4554891 1 - 13342542 a i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483322 1 + 7714307 a i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289175 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 917596 1 - 2385121 a i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354041 1 + 4274983 a i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5427451 1 + 8899380 A i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 385613 1 - 4471408 a i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5505225 1 + 5549422 A i otoGar3.GL873654 C 0 I 2 s canFam3.chr1 4637307 1 - 122678785 A i canFam3.chr1 I 41 C 0 e proCoq1.NW_012149263v1 595605 218 + 2501019 I e micMur3.chr22 3981013 236 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111120682 407 - 145441459 I e cebCap1.NW_016107633v1 1636385 1831 - 2680843 I e calJac3.chr22 28585253 1 + 49145316 I e rheMac8.chr19 30232975 404 + 53671032 I a score=-2381.000000 s hg38.chr19_GL383574v1_alt 98171 6 + 155864 T-AAAAA s panTro5.chr19 36166124 6 + 61309027 T-AAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913736 6 + 64411610 T-AAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6329707 6 - 8369475 T-AAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63919087 7 - 106955855 TAAAAAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34686194 7 + 59248254 TAAAAAA i macFas5.chr19 C 0 I 19 s macNem1.NW_012011689v1 4554892 7 - 13342542 taaaaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483323 3 + 7714307 taa---- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289176 7 + 50890351 TAAAAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 917597 7 - 2385121 taaaaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354042 7 + 4274983 taaaaaa i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5427452 6 + 8899380 TAAAAA- i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107633v1 1638216 6 - 2680843 TAAAAA- i cebCap1.NW_016107633v1 I 1831 C 0 s aotNan1.NW_018505377v1 385614 6 - 4471408 taaaaa- i aotNan1.NW_018505377v1 C 0 I 1 s otoGar3.GL873654 5505228 4 + 5549422 TCAG--- i otoGar3.GL873654 I 2 C 0 s canFam3.chr1 4637308 6 - 122678785 TGCAAA- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 595605 218 + 2501019 I e micMur3.chr22 3981013 236 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111120682 407 - 145441459 I e calJac3.chr22 28585253 1 + 49145316 I e rheMac8.chr19 30232975 404 + 53671032 I a score=69260.000000 s hg38.chr19_GL383574v1_alt 98177 6 + 155864 CATCTC s panTro5.chr19 36166130 6 + 61309027 CATCTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913742 6 + 64411610 CATCTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6329713 6 - 8369475 CATCTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63919094 6 - 106955855 CATCTC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34686220 6 + 59248254 CATCTC i macFas5.chr19 I 19 C 0 s macNem1.NW_012011689v1 4554899 6 - 13342542 CATCTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483326 6 + 7714307 CATCTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289183 6 + 50890351 CATCTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 917604 6 - 2385121 CATCTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354049 6 + 4274983 CATCTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585254 6 + 49145316 CATCTC i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5427459 6 + 8899380 CATCTC i saiBol1.JH378197 I 1 C 0 s cebCap1.NW_016107633v1 1638222 6 - 2680843 CATCTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 385621 6 - 4471408 CATCTC i aotNan1.NW_018505377v1 I 1 C 0 s otoGar3.GL873654 5505232 6 + 5549422 AATCTC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4637314 6 - 122678785 GGTCTC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 595605 218 + 2501019 I e micMur3.chr22 3981013 236 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111120682 407 - 145441459 I e rheMac8.chr19 30232975 404 + 53671032 I a score=1324579.000000 s hg38.chr19_GL383574v1_alt 98183 146 + 155864 TGATTGGAACCATGTAGCAACTTCAGAGCTGGC---TTGGAGGACTCTGGCA--C--TGTGTGGAAGGAATGAAGACTCAACACGTTAGGTCCTCCTTCCCACTGTGCCTGGA-GGGAGCCGATAAgctgcaggct-ggt--------tggctggctggctg----g s panTro5.chr19 36166136 145 + 61309027 TGATTGGAACCATGTAGCAACTTCAGAGCTGGC---TTGGAGGACTCTGGCA--C--TGTGTGGAAGGAATGAAGACTCAACACGTTAGGTCCTCCTTCCCACTGTGCCTGGA-GGGAGCCGATAAgctgcaggct-ggt--------tggctggctggctg----- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913748 146 + 64411610 TGATTGGAACCATGTAGCAACTTCAGAGCTGGC---TTGGAGGACTCTGGCA--C--TGTGTGGAAGGAATGAAGACTCAACACGTTAGGTCCTCCTTCCCACTGTGCCTGGA-GGGAGCCGATAAgctgcaggct-ggt--------tggctggctggctg----g i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6329719 147 - 8369475 TGATTGGAACCATGTAGCAACTTCAGAGCTGGC---TCGGAGGACTCTGGCA--C--TGTGTGGAAGGAATGAAGACTCAACACGTTAGGTCCTCCTTCCCACTGTGCCTGGAGGGGAGCCGATAAgctgcaggct-ggt--------tggctggctggctg----g i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63919100 137 - 106955855 TGATTGGAACCATGTAGCAACTTCAGAGCTGGC---TTGGAGGACTCTGGCA--C--TGTGTGGAAGGAATGAAGACTCAACACGTTAGATCCTCCTTCCCACTGTGCCTGGA-GGGAGCCGATAAGCTGCAGGCT-GGC--------TGGCTG------------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34686226 157 + 59248254 CGCTTGGAACCATGTAGCAACTTCAGAGCTGGC---TTGGAGGACTCGGGCA--C--TGTGTGGAAGGAATGAAGACTC-ACACGTTAGGTCCTCCTTCCCACTGTGCCTGGA-GGGAGCCGATAAgctgcgggct-ggttggctgattggctgactggctggctgg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4554905 153 - 13342542 CGCTTGGAACCATGTAGCAACTTCAGAGCTGGC---TTGGAGGACTCTGGCA--C--TATGTGGAAGGAATGAAGACTC-ACACGTTAGGTCCTCCTTCCCACTGTGCCTGGA-GGGAGCCGATAAGCTGCGggct-ggttggc----tggctggctggctggctgg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483332 149 + 7714307 CGCTTGGAACCATGTAGCAACTTCAGAGCTGGC---TTAGAGGACTCTGGCA--C--TGTGTGGAAGGAATGAAGACTC-ACACGTTAGGTCCTCCTTCCCACTGTGCCTGCA-GGGAGCCGATAAgctgcgggct-ggt--------tggctggctggctggctgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289189 149 + 50890351 CGCTTGGAACCATGTAGCAACTTCAGAGCTGGC---TTAGAGGACTCTGGCA--C--TGTGTGGAAGGAATGAAGACTC-ACACGTTAGGTCCTCCTTCCCACTGTGCCTGGA-GGGAGCCGATAAgctgcgggct-ggt--------tggctggctggctgactgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 917610 153 - 2385121 CGCTTGGAACCATGTAGCAACTTCAGAGCTGGC---TTAGAGGACTCTGGCA--C--TGTGTGGAAGGAATGAAGACTC-ACACGTTAGGTCCTCCTTCCCACTGTGCCTGCA-GGGAGCCGATAAGCTGCGggct-ggttggc----tggctggctggctggctgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354055 149 + 4274983 CGCTTGGAACCATGTAGCAACTTCAGAGCTGGC---TTGGAGGACTCTGGCA--C--TGTGTGGAAGGAATGAAGACTC-ACACGTTAGGTCCTCCTTCCCACTGTGCCTGGA-GGGAGCCGATAAgctgcgggct-ggt--------tggctggctggctggctgg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585260 139 + 49145316 CAATTGAAGCCAAGTAGCAACTTCAGAGCTGGC---TTGGAGGACTTTGGCA--C--TGTGTGGCAGAAATGAAGACACAACCCATTAAGTCCTCCTTCCCACTGTGCCTGGA-GGGAGCCGATAAACTGCGGGGTGGGC--------TGGCTG------------G i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427465 138 + 8899380 CGATTGGAGCCACGTAGCAACTTCAGAGCTGAC---TTGGAGGACTTCGGCA--C--TGTGTGGCAGGAATGAAGACTCAACCCATTAAGTCCTCCTTCCCACTGTGCCTGGA-GGGAGCCGATAAGCTGTGGGGT-GGT--------TGGCTG------------G i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1638228 138 - 2680843 CGATTGGAGCCACGTAGCAACTTCAGAGCTGGC---TTGGAGGACTTTGGCA--C--TGTGTGGCAGGAATGAAGACTCAACCCGTTAAGAGGTCCTTCTCACTGTGCCTGGA-GGGAGCCGATAAGCTGTGGGGT-GGC--------TGGCTG------------G i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 385627 138 - 4471408 CGATTGGAGCCACGCAGCAACTTCAGAGCTGGC---TTGGAGGACTTTGGCA--C--TGTGTGGCAGGAATGAAGACTCAACCCGTTAAGTCCTCCTTCTCACTGTGCCTGGA-GGGAGCCGATAAGCTGCGGGGT-GGC--------TGGCTG------------G i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5505238 135 + 5549422 CAAACGGAGCCATCTGGCAACTTCAGAGTTGGT---TTGGAGGATTCGGGTACCC--TATGCAGAAGGAATGAAGACTGGACCCTGTAGGTCCTCCTTCCTACTCTGCTCAGA-GGGAACAGATAAACTGCAGGGT-GGC--------AG----------------- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111121089 129 - 145441459 TGACTGGAGCCTCACATTTACCTCTGCGTCCCT---TTGGATGACT--------G--TATGTGGAAGGGATGAAGACTG-ACCCCTTAAGGCCTCCGTCCTGCTCTGCCCAGA-GGGAACTGATAGGCTGTGGGGG-AGCC-------CTGC--------------- i mm10.chr7 I 407 C 0 s canFam3.chr1 4637320 137 - 122678785 TAAGTGGAGCCAGAGGGGAGCCTCGGGGTTGTCGGGCTGGAAGCCCCCTGCA--CCGTGTGTGGCACAAATGCAGCCCCGGCTC-CGACGCCGTCCTGCCCAGTGTGTCCGAG-CGGGAC--GCGCGCTGCAGGGG-AGC--------GAGT--------------- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 595605 218 + 2501019 I e micMur3.chr22 3981013 236 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e rheMac8.chr19 30232975 404 + 53671032 I a score=175604.000000 s hg38.chr19_GL383574v1_alt 98329 17 + 155864 ctgTGAGCTCCTTCCAG s panTro5.chr19 36166281 14 + 61309027 ---TGAGCTCCTTCCAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913894 17 + 64411610 ctgTGAGCTCCTTCCAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6329866 17 - 8369475 ctgTGAGCTCCTTCCAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63919237 14 - 106955855 ---TGAACTCTTTCCAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34686383 17 + 59248254 ctgTGAGCTCCTTCCAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4555058 17 - 13342542 ctgTGAGCTCCTTCCAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483481 17 + 7714307 ctgTGAGCTCCTTCCAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289338 17 + 50890351 ctgTGAGCTCCTTCCAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 917763 17 - 2385121 ctgTGAGCTCCTTCCAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354204 17 + 4274983 ctgTGAGCTCCTTCCAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585399 17 + 49145316 CTGTGAGCTCCTTCCAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427603 17 + 8899380 CTGTGAGCTCCTTCCAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1638366 12 - 2680843 CTGTGAGCTCCT----- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 385765 17 - 4471408 CTGTGAGCTCCTTCCAG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 595823 17 + 2501019 CTGCGAGCTGCTCCCAG i proCoq1.NW_012149263v1 I 218 C 0 s otoGar3.GL873654 5505373 6 + 5549422 -----------TCCCAA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111121218 16 - 145441459 CTGTGAG-TCACCCCAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4637457 17 - 122678785 CTCTAAGTTACTCCCGG i canFam3.chr1 C 0 C 0 e micMur3.chr22 3981013 236 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e rheMac8.chr19 30232975 404 + 53671032 I a score=2593495.000000 s hg38.chr19_GL383574v1_alt 98346 186 + 155864 GCATCAGGATCGCTGCCAAGGACAGCCATTCTGACAGCCACagtgccctttttgttagggctaataaattccctcttgttttagtgacaaggagtt-ggggttattacattttgataacc-aaaggaaagtccactc---aca-tggGA-AAAGGGGACAGAGTTCTAGTTTCTTCAACCGGATGGAGCCAAG s panTro5.chr19 36166295 186 + 61309027 GCATCAGGATCGCTGCCAAGGACAGCCATTCTGACAGCCACagtgccctttttgttagggctaataaattccctcttgttttagtgacaaggagtt-ggggttattacattttgataacc-aaaggaaagtccactc---aca-tggGA-AAAGGGGACAGAGTTCTAGTTTCTTCAACCAGATGGACCCAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913911 186 + 64411610 GCATCAGGATCGCTGCCAAGGACAGCCATTCTGACAGCCACagtgccctttttgttagggctaataaattccctcttgttttagtgacaaggagtt-ggggttattacattttgataacc-aaaggaaagtccactc---aca-tgAGA-AAAGGGGACAGAGTTCTAGTTTCTTCAACCAGATGGACCCAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6329883 186 - 8369475 GCATCAGGATCACTGCCAAGGACAGCCATTCTGACAGCCACagtgccctttttgttagggctaataaattccctcttgttttagtgacaaggagtt-ggggttattacattttgataacc-aaaggaaagtccactc---aca-tggGA-AAAGGGGACAGAGTTCTAGTTTCTTCAACCAGATGGACCCAAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63919251 187 - 106955855 GCATCAGGATCGCTGCCAAGGACAGCCATTCTGACAGCCACagtgccctttttgttagggctaataaatcccctcttgttttagtgacaaggagtt-ggggttattacattttgataaccaaaaggaaagtccactc---aca-tggGA-AAAGGGGACAGAGTTCTAGTTTCTTCAACCAGATGGACCCAAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34686400 187 + 59248254 GCATCAGGATCGCTGCCAAGGACAGCCATTCTGACAGCCACagtaccctttttgttagggctaataagtcccctcttgttttagtgagaaggagct-ggggttattacattttgataaccaaaaggaaagtccactt---aca-tggGA-AAAGGGGACAGAGTTCTAGTTTCTTCAGCCAGATGAACCCAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4555075 187 - 13342542 GCATCAGGATCGCTGCCAAGGACAGCCATTCTGACAGCCACACTACcctttttgttagggctaataagtcccctcttgtttcagtgagaaggagtt-ggggttattacattttgataaccaaaaggaaagtccactt---aca-tggGA-AAAGGGGACAGAGTTCTAGTTTCTTCAGCCAGATGAACCCAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483498 187 + 7714307 GCATCAGCATCGCTGCCAAGGACAGCCATTCTGACAGCCACagtaccctttttgttagggctaataaatcccctcttgttttagtgagaaggagtt-ggggttattacattttgataaccaaaaggaaagtccactt---aca-tggGA-AAAGGGGACAGAGTTCTAGTTTCTTCAGCCAGATGAACCCAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289355 187 + 50890351 GCATCAGGATCGCTGCCAAGGACAGCCATTCTGACAGCCACagtaccctttttgttagggctaataaatcccctcttgttttagtgagaaggagtt-ggggttattacattttgataaccaaaaggaaagtccactt---aca-tggGA-AAAGGGGACAGAGTTCTAGTTCCTTCAGCCAGATGAACCCAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 917780 187 - 2385121 GCATCAGGATCGCTGCCAAGGACAGCCATTCTGACAGCCACagtaccctttttgttagggctaataaatcccctcttgttttagtgagaaggagtt-ggggttattacattttgataaccaaaaggaaagtccactt---aca-tggGA-AAAGGGGACAGAGTTCTAGTTTCTTCAGCCAGATGAACCCAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354221 187 + 4274983 GCATCAGGATCGCTGCCAAGGACAGCCATTCTGACAGCCACagtaccctttttgttagggctaataaatcccctcttgttttagtgagaaggagtt-ggggttattacattttgataaccaaaaggaaagtccactt---aca-gggGA-AAAGGGGACAGAGTTCTAGTTTCTTCAGCCAGATGGACCCAAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585416 184 + 49145316 GCATCCAGATCGCTGCCAAGGACAACCATTCTGACAGCCACagtgccctttttgttagggctaataaatcccctcttgttttagtgacaaggagtt-ggggttattccattttgataactaaaaggaaagtccgctc---aca-tggGA-AAAGGGGACAGAGTTCTAGTTTCTTTAACCAGATGGACCC--- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427620 184 + 8899380 GCATCCAGATCACTGCCAAGGACAGCCATTCTGACAGCCACagtgcccttttagttagggctaatcaatcccctcttgttttagtgacaaggagtt-agggttattccagtcggataactaaaaggaaagtctgctc---aca-tggGA-AAAGGGGACAGAGTTCTAGTTTCTTTAACCAGATGGACCC--- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1638378 181 - 2680843 ---TCCAGATCACTGCCAAGGACAGCCATTCTGACAGCCACagtgccctttttgttagggctaataaatcccctcttgttttagtgacaaggagtt-ggggttattccattttgataactaaaaggaaagtccgctc---aca-tggga-aaaggagACAGAGTTCTAGTTTCTTTAACCAGATGGACCC--- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 385782 183 - 4471408 GCATCCAGATCGCTGCCAAGGACAGCCATTCTGACAGCCACagtgccctttttgttagggctaataaatcccctcttgttttagtgacaaggagtt-ggggttattccattttgataactaaaa-gaaagtccgctc---aca-tggGA-AAAGGGGACAGAGTTCTAGTTTCTTTAACCAGATGGACCC--- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3981249 188 - 30143674 gcatcaggaccgctgccaaggacagccattctggtggccacagtgccctttttgttagggctaataaaccccctcttgtttcagtgacaaggagtt-ggggttattacattttgATAACCAAAAGGACAGTCCAACC---ACA-CCCAGCAAAAGGGACAGAGTTCTAATTTCTTCAGGCAAAGAGACCCAAG i micMur3.chr22 I 236 C 0 s proCoq1.NW_012149263v1 595840 187 + 2501019 GCATCAGGACTGCTGCCAAGGACAGCCATTCTGATGGCCACagtgccctttttgttagggctaataaatcccctcttg-ttcagtcacaaggagtt-ggggttattacattttgataatcaaaaggaaagtccaacc---aca-CCCAGCAAAAGGGACAGAGTTCTAATTTCTTCAAGCAAACAGACCCAAG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5505379 182 + 5549422 GCATCAGGACTGCTGCCAAGGACAGCCATTCTGATGACCACagtgccctttttgttagggctaataaatcccctcttgtttcagtgacaaggattt-ggggttcttacgttttgACAACCCAA-----AGTCCAACC---ACA-CCCAG-GAAGGGGACAGAGGTCTAATTTCTTCAAGCAAATAGACCCAAG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111121234 183 - 145441459 GCATCAGCACTGTTGCCAAGGCCAGTtgttcctgtggccacagtg-cctttttgtttgagctaatgaatccccttttgttccagtgacaaggaggtgggggttattacattttgACAACCAAAAAGCAAGTCCTCCCGTGGCC-AGGGG-CAGGGGGGCAGGGTTCTAGCT-ATACAACCAGATGGA------ i mm10.chr7 C 0 C 0 s canFam3.chr1 4637474 185 - 122678785 GCATCGGGACGCCTGCCAAGGACAGCCGTTCTGGTGGCCACagtgccctttttgttagggctaataagtcccctcttgtttccgtgccgaggagtt-ggggtcattacGTGTTGATAACC-GAAGGCAAGT-GGCCC---GCACTCGGG-AACGGGGACAGGGTCCTGCGCTCTCCA-CCAGATGGGCCCGGG i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 372207 0 + 643850 C e rheMac8.chr19 30232975 404 + 53671032 I a score=453909.000000 s hg38.chr19_GL383574v1_alt 98532 30 + 155864 AAGATTTCTCACGCCCCT-T-AGCCCTGGCCC s panTro5.chr19 36166481 30 + 61309027 AAGATTTCTCACGCCCCT-T-AGCCCTGGCCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39914097 30 + 64411610 AAGATTTCTCACGCCCCT-T-AGCCCTGGCCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6330069 30 - 8369475 AAGATTTCTCATGCCCCT-T-AGCCCTGGCCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63919438 30 - 106955855 AAGATTTCTCACGCCCCT-T-AGCCCTGACCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30233379 31 + 53671032 AAGATTTCTCACGCCCCTCT-AGCCCTGGCCC i rheMac8.chr19 I 404 I 1 s macFas5.chr19 34686587 30 + 59248254 AAGATTTCTCACGCCCCT-T-AGCCCTGGCCC i macFas5.chr19 C 0 M 2923 s macNem1.NW_012011689v1 4555262 30 - 13342542 AAGATTTCTCACGCCCCT-T-AGCCCTGGCCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483685 30 + 7714307 AAGATTTCTCACGCCCCT-T-AGCCCTGGCCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289542 30 + 50890351 AAGATTTCTCACGCCCCT-T-ACCCCTGGCCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 917967 30 - 2385121 AAGATTTCTCACGCCCCT-T-AGCCCTGGCCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354408 30 + 4274983 AAGATTTCTCACGCCCCT-T-AGCCCTGGCCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585600 30 + 49145316 AAGATTTCTCACACCCCT-T-AGCCTTGGCCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427804 30 + 8899380 AAGATTTCTCATGCCCCT-T-AGCCTTGGCCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1638559 30 - 2680843 AAGATTTCTCATGCCCCT-T-AGCCTTGGCCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 385965 30 - 4471408 AAGATTTCTCACGCCCCT-T-AGCCTTGGCCC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3981437 30 - 30143674 AAGAATTCTCATGCCTCT-T-AGCATTGGCTC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 596027 30 + 2501019 AAGATCTCTCATGCCTCT-T-AGCACTGGCTC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5505561 30 + 5549422 AAGATCTCTCATGCACCT-T-AGCATTGGCCA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111121417 24 - 145441459 ------TCTTGTATCCCT-C-ATCCTTGGCCC i mm10.chr7 C 0 C 0 s canFam3.chr1 4637659 31 - 122678785 AAGGTCTCCTGTCCCGCT-TCAGGCTCGGCCC i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 372207 0 + 643850 C a score=49761.000000 s hg38.chr19_GL383574v1_alt 98562 3 + 155864 CTG s panTro5.chr19 36166511 3 + 61309027 CTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39914127 3 + 64411610 CTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6330099 3 - 8369475 CTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63919468 3 - 106955855 CTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30233411 3 + 53671032 CTG i rheMac8.chr19 I 1 C 0 s macNem1.NW_012011689v1 4555292 3 - 13342542 CTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483715 3 + 7714307 CTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289572 3 + 50890351 CTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 917997 3 - 2385121 CTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354438 3 + 4274983 CTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585630 3 + 49145316 CTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427834 3 + 8899380 CTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1638589 3 - 2680843 CTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 385995 3 - 4471408 CTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3981467 3 - 30143674 CTG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 596057 3 + 2501019 CTG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5505591 3 + 5549422 CTG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111121441 3 - 145441459 CTG i mm10.chr7 C 0 I 560 e dasNov3.JH563638 372207 0 + 643850 C e canFam3.chr1 4637690 0 - 122678785 C e macFas5.chr19 34686617 2923 + 59248254 M a score=614200.000000 s hg38.chr19_GL383574v1_alt 98565 49 + 155864 ATGGGTTTAAGAATCT------------GAGGGGATGCTCATAAGTTTCACTGTTCAGAAC s panTro5.chr19 36166514 49 + 61309027 ATGGGTTTAAGAATCT------------GAGGGGATGCTCATAAGTTTCACTGTTCAGAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39914130 49 + 64411610 ATGGGCTTAAGAATCT------------GAGGGGATGCTCATAAGTTTCACTGTTCAGAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6330102 49 - 8369475 ATGGGTTTAAGAATCT------------GAGGGGATGCTCATAAGTTTCACTGTTCAGAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63919471 49 - 106955855 ATGGGTTTAAGAATCT------------GAGGGGATGCTCATAAGTTTCACTGTTCAGAAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30233414 47 + 53671032 ATGGTTT--AAAATCT------------GAGGGGATGCTCATAATTTTCATTGTTCAGAAC i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4555295 49 - 13342542 ATGGGTTTAAGAATCT------------GAGGGGATGCTCATAATTTTCATTGTTCAGAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483718 49 + 7714307 ATGGGTTTAAGAATCT------------GAGGGGATGCTCATAATTTTCATTGTTCAGAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289575 49 + 50890351 ATGGGTTTAAGAATCT------------GAGGGGATGCTCATAATTTTCATTGTTCAGAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 918000 49 - 2385121 ATGGGTTTAAGAATCT------------GAGGGGATGCTCATAATTTTCATTGTTCAGAAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354441 49 + 4274983 ATGGGTTTAAGAATCT------------GAGGGGATGCTCATAATTTTCATTGTTCAGAAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585633 49 + 49145316 ATGGGTTTAAGAATCT------------GAGGGGATGCTCATAAGTTTTATTTTTCAGAAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427837 49 + 8899380 ATGGGTTTAAGAATCT------------GAGGGGATGCTCATAAGTTTTATTGTTCAGAAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1638592 49 - 2680843 ATGGGTTTAAGAATCT------------GAGGGGATGCTCATAAGTTTTATTGTTTGGAAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 385998 49 - 4471408 ATGGGTTTAAGAATCT------------GAGGGGATGCTCATAAGTTTTATTGTTCAGAAC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3981470 49 - 30143674 GTGGGTTTGTGAATCT------------AAAGGGATGCTCATAAGTTTAATTGCTCAGAAC i micMur3.chr22 C 0 I 21 s proCoq1.NW_012149263v1 596060 49 + 2501019 GTGGGTTTATGAATCT------------AAAGGGATGTTCATAAGTTTAATTGCTCAGAAC i proCoq1.NW_012149263v1 C 0 I 21 s otoGar3.GL873654 5505594 47 + 5549422 GTGGGTTTATGAATCT------------GAAGGGATGCTCATAAACTTAATTGTT--GAAC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4637690 56 - 122678785 GTGGGTCTACACATCCACAGGTGGGGTGGGGGGGATTTTCATAA-----ATTATCCAGAAC i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111121444 560 - 145441459 I e macFas5.chr19 34686617 2923 + 59248254 M a score=35271.000000 s hg38.chr19_GL383574v1_alt 98614 3 + 155864 CCC s panTro5.chr19 36166563 3 + 61309027 CCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39914179 3 + 64411610 CCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6330151 3 - 8369475 CCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63919520 3 - 106955855 CCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30233461 3 + 53671032 CCC i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4555344 3 - 13342542 CCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483767 3 + 7714307 CCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289624 3 + 50890351 CCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 918049 3 - 2385121 CCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354490 3 + 4274983 CCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585682 3 + 49145316 CCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427886 3 + 8899380 CCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1638641 3 - 2680843 TCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 386047 3 - 4471408 CCC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5505641 3 + 5549422 TCC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4637746 3 - 122678785 TCC i canFam3.chr1 C 0 I 219 e proCoq1.NW_012149263v1 596109 21 + 2501019 I e micMur3.chr22 3981519 21 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111121444 560 - 145441459 I e macFas5.chr19 34686617 2923 + 59248254 M a score=1045865.000000 s hg38.chr19_GL383574v1_alt 98617 130 + 155864 TCCAAAACATGTTCAACCTAggccgggtacaatggctcatgcctataatcccagaacttgcagaggccgaggcaggcaggtcacttgaggtcaggagttcaaggccagcctggccaa-catggtgaaacc--c s panTro5.chr19 36166566 130 + 61309027 TCCAAAACATGTTCAACCTAggccaggcacaatggctcatgcctataatcccagaacttgcggaggccgaggcaggcaggtcacttgaggtcaggagttcaaggccagcctggccaa-catggtgaaacc--c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39914182 130 + 64411610 TCCAAAACATGTTCAACCTAggccaggcacaatggctcatgcctataatcccagaacttgcggaggccgaggcaggcaggtcacttgaggtcaggagttcaaggccagcctggccaa-catggtgaaacc--c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6330154 130 - 8369475 TCCAAAACATGTTCAACCTAggccgggcacaatggcccatgcctataatcccagaacttgcggaggctgaggcaggcaggtcacttgaggtcaggagttcaaggccagcctggccaa-cgtggtgaaacc--c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63919523 130 - 106955855 TCCAAAACATGTTCAACCTAggccaggcacaatggctcacgcctgtaatcccagaacttgcagaggccgaggcaggcaggtcactcgaggtcaggagttcaaggctggcctggccaa-catggtgaaacc--c i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30233464 131 + 53671032 TCCAAAAAATGTTCAACTTAggccgggcacaatggcttgcgcctgtaatcccagaacttgcggaggccaaggcaggcaggtcactcgaggtcaggagtccaaggccagcctggccaaccggggtgaaacc--c i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4555347 130 - 13342542 TCCAAAAAATGTTCAACTTAggccgggcacaatggcttgcgcctgtaatcccagaacttgcggaggccaaggcaggcaggtcactcgaggtcaggagtccaaggccagcctggccaa-cagggtgaaacc--c i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483770 130 + 7714307 TCCAAAAAATGTTCAACTTAggctgggcacaatggcttgcgcctgtaatcccagaacttgcggaggccaaggcaggcaggtcactcgaggtcaggagtccaaggccagcctggccaa-cagggtgaaacc--c i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289627 130 + 50890351 TCCAAAAAACGTTCAACTTAggccgggcacaatggcttgcgcctgtaatcccagaacttgtggaggccaaggcaggcaggtcacttgaggtcaggagtccaaggccagcctggccaa-cagggtgaaacc--c i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 918052 130 - 2385121 TCCAAAAAATGTTCAACTTAggccgggcacaatggcttgcgcctgtaatcccagaacttgcggaggccaaggcaggcaggtcactcaaggtcaggagtccaaggccagtctggccaa-cagggtgaaacc--c i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354493 130 + 4274983 TCCAAAAAATGTTCAACTTAggccaggcacaatggcttgcgcctgtaatcccagaacttgcggaggccaaggcaggcaggtcacttgaggtcaggagttcaaggccagcctggccaa-cagggtgaaacc--c i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585685 129 + 49145316 TCCAAAAAGTGTTCAACCTAggctgggtgcgatagcttatgcttataatctcagcacttggagaggccaaggcaggcagatcacttgaggtcaggagttcaaggcctgcctggccaa-catggtgaaacc--- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5427889 123 + 8899380 TCCAAAAAGTGTTCAATCTAggctgggcgagatagcttatgcttgtaatctcagcacttggagaggccgaggcagg------acttgaggtcaggggttcaaggccagcctggccaa-catcgtgaaacc--- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1638644 128 - 2680843 TCCAAAAAGCATTCAACCTAgactgggcgcgacagcttatgcttgtaatctcagcacctggagaggccgaggc--gcagatcacttgaggtcaggagttcaaggccagcctggctag-catggtgaaaccc-- i cebCap1.NW_016107633v1 C 0 I 568 s aotNan1.NW_018505377v1 386050 130 - 4471408 TCCAAAAAGTGTTCAACCTAggctgggcgcgatagctcatgcttgtaatctcagcacttggagaggccgaggcaggcagatcacttgaggtcaggagttcagggccagcctggccaa-catggtgaaacc-c- i aotNan1.NW_018505377v1 C 0 I 549 e proCoq1.NW_012149263v1 596109 21 + 2501019 I e micMur3.chr22 3981519 21 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5505644 0 + 5549422 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e macFas5.chr19 34686617 2923 + 59248254 M a score=435853.000000 s hg38.chr19_GL383574v1_alt 98747 79 + 155864 ccgtctctactaaaaatacaaaaagta--gccaggcatggtggcgtgcgcctgtagtcccagctac-tcaggagcctgaggc s panTro5.chr19 36166696 79 + 61309027 ccgtctctactaaaaatacaaaaagta--gccaggcatggtggcgtgcgcctgtagtcccagctac-tcaggagcctgaggc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39914312 79 + 64411610 ccgtctctactaaaaatacaaaaagta--gccaggcatggtggcgtgcacctgtagtcccagctac-tcaggagcctgaggc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6330284 79 - 8369475 ccatctctactaaaaatacaaaaagta--gccaggcatggtggcgtgtgcctgtagtcccagctac-tcaggagcctgaggc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63919653 79 - 106955855 ccatctctactaaaaatacaaaaatta--gccaggcatggtggcatgtgcctgtagtcccagctac-tcaggagcctgaggc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30233595 79 + 53671032 ccatctctactaaaaatac-aaaatta--gccaggcatggtggcatgcgcctgtaatcccagctataccaggagcctgaggc i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4555477 79 - 13342542 ccatctctactaaaaatacaaaaatta--gccaggcatggtggcatgcgcctgtaatcccagctac-tcaggagcctgaggc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483900 79 + 7714307 ccatctctactaaaaatacaaaaatta--gccaggcatggtggcatgcgcctgtaatcccagctac-tcaggagcctgaggc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289757 79 + 50890351 ccatctctactaaaaatacaaaaatta--gccaggcatggtggcatgcgcctgtaatcccagctac-tcaggagcctgaggc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 918182 79 - 2385121 ccatctctactaaaaatacaaaaatta--gccaggcatggtggcatgcgcctgtaatcccagctac-tcaggagcctgaggc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354623 79 + 4274983 ccgtctctaccaaaaatacaaaaatta--gccaggcatggtggcatgtgcctgtaatcccagctac-tcaggagcctgaggc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585814 64 + 49145316 ctgtctcta-ttaaaaaAT-AGAATta---------------gctcatacctgtaatctcagcact-ttgagaggctgaggt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5428012 80 + 8899380 ctgtctctatttaaaaaat-agaattagcgccgggcgcggtggctcaagcctgtaatcccagcact-ttgggaggctgaggc i saiBol1.JH378197 C 0 I 2404 e proCoq1.NW_012149263v1 596109 21 + 2501019 I e micMur3.chr22 3981519 21 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5505644 0 + 5549422 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e macFas5.chr19 34686617 2923 + 59248254 M a score=8789.000000 s hg38.chr19_GL383574v1_alt 98826 2 + 155864 ac s panTro5.chr19 36166775 2 + 61309027 ac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39914391 2 + 64411610 ac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6330363 2 - 8369475 ac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63919732 2 - 106955855 ac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30233674 2 + 53671032 ac i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4555556 2 - 13342542 ac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483979 2 + 7714307 ac i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289836 2 + 50890351 ac i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 918261 2 - 2385121 ac i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354702 2 + 4274983 ac i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585878 2 + 49145316 gg i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 596109 21 + 2501019 I e micMur3.chr22 3981519 21 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5505644 0 + 5549422 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e macFas5.chr19 34686617 2923 + 59248254 M a score=206314.000000 s hg38.chr19_GL383574v1_alt 98828 52 + 155864 aagaattgcttgaacct-gggagtcggaggttgcagtga-gccgagatcacacc s panTro5.chr19 36166777 52 + 61309027 aagaattgcttgaacct-gggagtcggaggttgcagtga-gccgagatcacgcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39914393 52 + 64411610 aagaattgcttgaacct-gggagtcggaggttgcagtga-gccgagatcacgcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6330365 52 - 8369475 aagaattgcttgaacct-gggagtcggaggttgcagtga-gccgagattgcgcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63919734 52 - 106955855 gagaatcgcttgaacct-gggagacggaggttgcagtga-accgagatcacgcc i nomLeu3.chr10 C 0 I 188 s rheMac8.chr19 30233676 51 + 53671032 aagaattacttgaacat--ggagacagaggttgcagtga-gccgagatcacgcc i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4555558 54 - 13342542 aagaattacttgaacatagggagacagaggttgcagtgatgccgagatcacgcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5483981 52 + 7714307 aagaattacttgaacag-gggagacagaggttgcagtga-gccaagatcacgcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289838 52 + 50890351 aagaattacttgaacat-gggagacagaggttgcagtga-gccgagatcacgcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 918263 52 - 2385121 aagaattacttgaacat-gggagacagaggttgcagtga-gccgagatcacgcc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354704 52 + 4274983 aagaattacttgaacat-gggagacggaggttgcagtga-gctgagatcacgcc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585880 29 + 49145316 gaggatcacttgaggct-aggagctgaaga------------------------ i calJac3.chr22 C 0 C 0 s otoGar3.GL873654 5505644 18 + 5549422 AATAAGCGTTCAATCCT-G----------------------------------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 596109 21 + 2501019 I e micMur3.chr22 3981519 21 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e macFas5.chr19 34686617 2923 + 59248254 M a score=165861.000000 s hg38.chr19_GL383574v1_alt 98880 43 + 155864 actgcactcc---agcctgg-gt-gacagag-tgagactctg-tctcaaa s panTro5.chr19 36166829 43 + 61309027 actgcactcc---agcctgg-gc-gacagag-caagactctg-tctcaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39914445 43 + 64411610 actgcactcc---agcctgg-gc-gacagag-cgagactctg-tctcaaa i panPan2.chr19 C 0 T 5191 s gorGor5.CYUI01015150v1 6330417 43 - 8369475 actggactcc---agcctgg-gt-gacagag-tgagactctg-tctcaaa i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30233727 43 + 53671032 actgcactcc---agcctgg-gt-gacagag-ggagactctg-tctcaaa i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4555612 49 - 13342542 actgcactccccaagcctggagt-gacagagtggagactctgatctcaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5484033 43 + 7714307 actgcactcc---agcctgg-gt-gacagag-ggagactctg-tctcaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289890 43 + 50890351 actgcactcc---agcctgg-gt-gacagag-ggagactctg-tctcaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 918315 43 - 2385121 actgcactcc---agcctgg-gt-gacagag-ggagactctg-tctcaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2354756 43 + 4274983 actgcactcc---agcctgg-gt-gacagag-cgagactccg-tctcaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585909 36 + 49145316 --------cc---aacctgg-gcaaaaaaag-tgggactcca-tctctat i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 596109 21 + 2501019 I e micMur3.chr22 3981519 21 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5505662 0 + 5549422 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e macFas5.chr19 34686617 2923 + 59248254 M e nomLeu3.chr10 63919786 188 - 106955855 I a score=12285.000000 s hg38.chr19_GL383574v1_alt 98923 3 + 155864 aaa s panTro5.chr19 36166872 3 + 61309027 aaa i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6330460 3 - 8369475 aaa i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30233770 3 + 53671032 aaa i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4555661 3 - 13342542 aaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5484076 3 + 7714307 aaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289933 3 + 50890351 aaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 918358 3 - 2385121 aaa i manLeu1.NW_012102454v1 C 0 I 1683 s colAng1.NW_012111697v1 2354799 3 + 4274983 aaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585945 3 + 49145316 aaa i calJac3.chr22 C 0 I 5 e proCoq1.NW_012149263v1 596109 21 + 2501019 I e micMur3.chr22 3981519 21 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5505662 0 + 5549422 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e macFas5.chr19 34686617 2923 + 59248254 M e nomLeu3.chr10 63919786 188 - 106955855 I e panPan2.chr19 39914488 5191 + 64411610 T a score=6984.000000 s hg38.chr19_GL383574v1_alt 98926 4 + 155864 aaaa s panTro5.chr19 36166875 4 + 61309027 aaaa i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6330463 4 - 8369475 aaaa i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30233773 4 + 53671032 aaaa i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4555664 4 - 13342542 aaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5484079 4 + 7714307 aaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289936 4 + 50890351 aaaa i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2354802 4 + 4274983 aaga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28585953 3 + 49145316 gaa- i calJac3.chr22 I 5 C 0 e proCoq1.NW_012149263v1 596109 21 + 2501019 I e micMur3.chr22 3981519 21 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5505662 0 + 5549422 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e macFas5.chr19 34686617 2923 + 59248254 M e nomLeu3.chr10 63919786 188 - 106955855 I e panPan2.chr19 39914488 5191 + 64411610 T a score=7644.000000 s hg38.chr19_GL383574v1_alt 98930 3 + 155864 aaa s panTro5.chr19 36166879 3 + 61309027 aaa i panTro5.chr19 C 0 I 4 s rheMac8.chr19 30233777 3 + 53671032 aaa i rheMac8.chr19 C 0 I 4 s macNem1.NW_012011689v1 4555668 3 - 13342542 aaa i macNem1.NW_012011689v1 C 0 M 1528 s cerAty1.NW_012005268v1 5484083 3 + 7714307 aaa i cerAty1.NW_012005268v1 C 0 I 4 s chlSab2.chr6 29289940 3 + 50890351 aaa i chlSab2.chr6 C 0 I 5 s colAng1.NW_012111697v1 2354806 3 + 4274983 aaa i colAng1.NW_012111697v1 C 0 I 7333 s calJac3.chr22 28585956 3 + 49145316 aaa i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 596109 21 + 2501019 I e micMur3.chr22 3981519 21 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5505662 0 + 5549422 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e macFas5.chr19 34686617 2923 + 59248254 M e nomLeu3.chr10 63919786 188 - 106955855 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39914488 5191 + 64411610 T a score=1365.000000 s hg38.chr19_GL383574v1_alt 98933 1 + 155864 T s panTro5.chr19 36166886 1 + 61309027 T i panTro5.chr19 I 4 C 0 s rheMac8.chr19 30233784 1 + 53671032 T i rheMac8.chr19 I 4 C 0 s cerAty1.NW_012005268v1 5484090 1 + 7714307 T i cerAty1.NW_012005268v1 I 4 C 0 s chlSab2.chr6 29289948 1 + 50890351 T i chlSab2.chr6 I 5 C 0 s calJac3.chr22 28585959 1 + 49145316 t i calJac3.chr22 C 0 I 169 e proCoq1.NW_012149263v1 596109 21 + 2501019 I e micMur3.chr22 3981519 21 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e otoGar3.GL873654 5505662 0 + 5549422 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e colAng1.NW_012111697v1 2354809 7333 + 4274983 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e macNem1.NW_012011689v1 4555671 1528 - 13342542 M e macFas5.chr19 34686617 2923 + 59248254 M e nomLeu3.chr10 63919786 188 - 106955855 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39914488 5191 + 64411610 T a score=24259.000000 s hg38.chr19_GL383574v1_alt 98934 32 + 155864 GTGTTCAACC----------ttttt-------tttttt--ct-gaggcagag s panTro5.chr19 36166887 34 + 61309027 GTGTTCAACC----------ttttt-------tttttttcct-gaggcagag i panTro5.chr19 C 0 C 0 s rheMac8.chr19 30233785 44 + 53671032 GTGTTCAACCTCAAAttcttttttt-------tttttttcct-gaagcagag i rheMac8.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5484091 51 + 7714307 GTGTTCAACCTCAAAttctttttttatttttattttttttct-gaagcagag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289949 45 + 50890351 GTGTTCAACCTCAAAttcttttttt-------ttttttttttggaagcagag i chlSab2.chr6 C 0 C 0 s otoGar3.GL873654 5505662 26 + 5549422 -------------AA-----ttttt-------tttctttttt-gagacacag i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 596109 21 + 2501019 I e micMur3.chr22 3981519 21 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e colAng1.NW_012111697v1 2354809 7333 + 4274983 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e macNem1.NW_012011689v1 4555671 1528 - 13342542 M e macFas5.chr19 34686617 2923 + 59248254 M e nomLeu3.chr10 63919786 188 - 106955855 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39914488 5191 + 64411610 T a score=61138.000000 s hg38.chr19_GL383574v1_alt 98966 51 + 155864 tctcgctctgtcg-cccaggctggagt-gcagtggcatgatctcggctcactg s panTro5.chr19 36166921 51 + 61309027 tctcgctctgtcg-cccaggctggagt-gcagtggcatgatctcggctcactg i panTro5.chr19 C 0 C 0 s rheMac8.chr19 30233829 52 + 53671032 ctctcctctgtca-ctcaggctggagtggcagtggcctgatctcagctcaccg i rheMac8.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5484142 51 + 7714307 tctccctctgtca-ctcaggctggagt-gcagtggcctgatctcagctcactg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29289994 51 + 50890351 tctccctctgtcg-ctcaggctggaat-gcagtggcctgatctcagctcactg i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2362142 51 + 4274983 tctcactctgtct-cccaggctggagt-gcagtcctgcaaccttggctcactg i colAng1.NW_012111697v1 I 7333 C 0 s otoGar3.GL873654 5505688 49 + 5549422 tctcactttgttgtcttaggctagact-gccatggc---atcatggcttacaa i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 596109 21 + 2501019 I e micMur3.chr22 3981519 21 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e macNem1.NW_012011689v1 4555671 1528 - 13342542 M e macFas5.chr19 34686617 2923 + 59248254 M e nomLeu3.chr10 63919786 188 - 106955855 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39914488 5191 + 64411610 T a score=124102.000000 s hg38.chr19_GL383574v1_alt 99017 70 + 155864 caacctccacctcccaggctcaagcgattctcctgcctcagcctcccgagtagctgggataacagg--cgtg s panTro5.chr19 36166972 70 + 61309027 caacctccacctcccaggctcaagcgattctcctgcctcagcctcccaagtagctgggataacagg--cgtg i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63919974 70 - 106955855 caccctccaccacccaggcttaagcgattctcctgcctcagtttcccgagtagctgggaaaacagg--tgtg i nomLeu3.chr10 I 188 C 0 s rheMac8.chr19 30233881 69 + 53671032 caaccttcacttcccaggttcaagcgatcctcctgcctcagcctcccgagtagct-ggattacagg--caca i rheMac8.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5484193 72 + 7714307 caacctccacttcccaggttcaagcgatcctcctgcctcagcctcccgagtagctgggattacaggcacaca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29290045 70 + 50890351 caacctccacttcccaggttcaagcaatcctcctgcctcagcctcccgagtagctgggattacagg--caca i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2362193 70 + 4274983 aaagctccgcctcccgggttcacgccattctcccgcatcagcctcccaagtaactgggactacagg--cacc i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5505737 67 + 5549422 gaacctcaaagccctggcctcaagtgatccttcagcctcagcctcccgaatagttgggactacagg--c--- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 596109 21 + 2501019 I e micMur3.chr22 3981519 21 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e macNem1.NW_012011689v1 4555671 1528 - 13342542 M e macFas5.chr19 34686617 2923 + 59248254 M e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39914488 5191 + 64411610 T a score=28767.000000 s hg38.chr19_GL383574v1_alt 99087 36 + 155864 cacaaccac--gcctggctaa-tttttttt--------------------------gtattttta s panTro5.chr19 36167042 35 + 61309027 cacaaccac--gcctggctaa-ttttttt---------------------------gtattttta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39909297 36 + 64411610 -----------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnna i panPan2.chr19 T 5191 C 0 s nomLeu3.chr10 63920044 35 - 106955855 cacgaccac--gcctgggtaa-ttttttt---------------------------gtattttta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30233950 36 + 53671032 caccaccat--gcccggctaatttttttt---------------------------gtattttta i rheMac8.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5484265 35 + 7714307 cacaaccat--gccccgctaa-ttttttt---------------------------gtattttta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29290115 35 + 50890351 cacaaccat--gcccggctaa-ttttttt---------------------------gtattttta i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2362263 34 + 4274983 tgccaccac--gcccagctaa--tttttt---------------------------gtattttta i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5505804 36 + 5549422 catggctacaagtctcactaa-tttgttt----------------------------tattttta i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 596109 21 + 2501019 I e micMur3.chr22 3981519 21 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e macNem1.NW_012011689v1 4555671 1528 - 13342542 M e macFas5.chr19 34686617 2923 + 59248254 M e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=415201.000000 s hg38.chr19_GL383574v1_alt 99123 127 + 155864 gtagagacagagtttcaccatgtt-ggccaggctgatctcaaactcctgacgtcaagtgattcgcccgcctcagcctcccaaagtgctgggattataggcatgag-ccaccatgcctggcTCGACCTCA s panTro5.chr19 36167077 127 + 61309027 gtagagacagagtttcaccatgtt-ggccaggctgatctcgaactcctgacgtcaagtgattcatccgcctcagcctcccaaagtgctgggattataggcatgag-ccaccatgcctggcTCGACCTCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39909333 127 + 64411610 gtagagacagagtttcaccatgtt-ggccaggctgatctcgaactcctgacgtcaagtgattcatccgcctcagcctcccaaagtgctgggattataggcatgag-ccaccatgcctggcTCGACCTCA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63920079 127 - 106955855 gtagagacagagtttcacaatgtt-ggccaggctgatctcgaactcctgacgtcaagtgattcgcccgtctcagcctcccaaagtgctgggattataggcgtgag-ccaccatgcctggcTCGACCTCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30233986 128 + 53671032 gtaaagacagggtttcaccatgttgggccaggctgatgccgaactcctgacc-caagtgatttgcccgcctcagcctcccaaagtgctgggattacaggcgtgagcccaccatgcctggcTCGACCTCA i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4557203 127 - 13342542 gtaaagacagggtttcaccatgtt-ggccaggctgatgccgaactcctgacctcaagtgatttgcccgcctcagcctcccaaagtgctgggattacaggcgtgag-ccaccgtgcctggcTCGACCTCA i macNem1.NW_012011689v1 M 1528 C 0 s cerAty1.NW_012005268v1 5484300 127 + 7714307 gtaaagacagggtatcaccatgtt-ggccaggctgatgtcaaactcctgacctcaagtgatttgcccgcctcagcctcccaaagtgctgggattacaggcgtgag-ccaccatgcctggcTCGACCTCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29290150 127 + 50890351 gtaaagacagggtttcaccatgtt-ggccaggctgatgtcgaactcctgacctcaagtgatttgcccgcctcagcctcccaaagtgctgggattacaggcgtgag-ccaccatgcctggcTCGACCTCA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2362297 122 + 4274983 gtagagatggggtttcaccattca----caggatggtctcaatctcccgacctt--gtgatccgcctgtctcggcctcctaaagtgctgggattacaggcatgag-ctgccatgcctggcTCGACCTCA i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5505840 124 + 5549422 gtagagtcagggtctcac--tctt-gctcaggctggtcttgaactcctgagctcaagcaatccacctatctctgcctcccagagtgctgggatgacagccatgaa-ccaccatgcccagcTAATCCTG- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 596109 21 + 2501019 I e micMur3.chr22 3981519 21 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e macFas5.chr19 34686617 2923 + 59248254 M e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=215536.000000 s hg38.chr19_GL383574v1_alt 99250 43 + 155864 AATTCTTTACAAGGCCACAGAATTGACTCTACACACTATCCTC s panTro5.chr19 36167204 43 + 61309027 AATTCTTTACGAGGCCACAGAATTGACTCTACACACTACCCTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39909460 43 + 64411610 AATTCTTTACGAGGCCACAGAATTGACTCTACACACTACCCTC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63920206 43 - 106955855 AATTCTTTACGAGGCCACAGAATTGACTCTGCACACTATCCTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30234114 43 + 53671032 AATTCTTTACAAGGCCACAGAATTGACTCTGCACACGATCCTC i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4557330 43 - 13342542 AATTCTTTACAAGGCCACAGAATTGACTCTGCACACGATCCTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5484427 43 + 7714307 AATTCTTTACAAGGCCACAGAATTGACTCTGCACACGATCCTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29290277 43 + 50890351 AATTCTTTACAAGGCCACAGAATTGACTCTGCACACGATCCTC i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2362419 43 + 4274983 AATTCTTTACAAGGCCACAGAATTGACTCTGCACACGATCCTC i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3981540 43 - 30143674 AATTCTTTACAAGGCCATGGAATCAACTCTGCAAACTATCCTC i micMur3.chr22 I 21 C 0 s proCoq1.NW_012149263v1 596130 43 + 2501019 AATTCTTTACAAGGCCATGGAATCAACTCTGCAAACTATCCTC i proCoq1.NW_012149263v1 I 21 C 0 s otoGar3.GL873654 5505964 40 + 5549422 AATTCTTCATAAGTCTGTAGAATCAAC---ACAAACTGTCCTC i otoGar3.GL873654 C 0 I 317 e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e macFas5.chr19 34686617 2923 + 59248254 M e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=195219.000000 s hg38.chr19_GL383574v1_alt 99293 39 + 155864 TAACAATTCCTGGGAGACACATCTCGTCGGACTAGAGCC s panTro5.chr19 36167247 39 + 61309027 TAACAATTCCTGGGAGACACATCTTGTCGGACTAGAGCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39909503 39 + 64411610 TAACAATTCCTGGGAGACACATCTTGTCGGACTAGAGCC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63920249 39 - 106955855 TAACAATTCCTGGGAGACACATCTTGTCGGACCAGAGCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30234157 39 + 53671032 TAACAATTCCTGGGAGAACAATCTTGTCGGACCAGAGTC i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4557373 39 - 13342542 TAACAATTCCTGGGAGACACATCTTGTCGGACCAGAGTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5484470 39 + 7714307 TAACAATTCCTGGGAGACACATCTTGTCGGACCAGAGTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29290320 39 + 50890351 TAACAATTCCTGGGAGACACATCTTGTCGGACCAGAGTC i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2362462 39 + 4274983 TAACAATTCCTGGGAGACACATCTTGTTGGACCAGAGTC i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3981583 39 - 30143674 TAACGATGCTTGGGAGACACATCTTGCCGGACCAAAGCC i micMur3.chr22 C 0 I 90 s proCoq1.NW_012149263v1 596173 39 + 2501019 TAGCGATGTTTGGGAGACACATCTCGCCGGACCAAAGCC i proCoq1.NW_012149263v1 C 0 I 90 s otoGar3.GL873654 5506321 39 + 5549422 TAGTGATTCTTGTAAGACACATCTTATAGGACTAAAGCT i otoGar3.GL873654 I 317 C 0 e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e macFas5.chr19 34686617 2923 + 59248254 M e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=689219.000000 s hg38.chr19_GL383574v1_alt 99332 225 + 155864 TCAATGCGGGCCTTCTGAATGGAGGTGGGACCTGTGGCCAGGTCCACGTATGGGGATCTGGGAAGGACGGGACCTTTGCTCTGTCAGCTGTGGAATGGACAAGAGCTACCCTTGACTTTCAGTATAGcacttgagcccaggaggtccaggctgcagtaagccatgattgca-ggactatactccagcatgggtgacacagtgagaccccgtctctaaaaaaaaTGA s panTro5.chr19 36167286 225 + 61309027 TCAATGTGGGCCTTCTGAATGGAGGTGGGGCCTGTGGCCAGGTCCACGTATGGGGATCTGGGAAGGACGGGACCTTTGCTCTGTCAGCTGTGGAATGGACAAGAGCTACCCTTGACTTTCAGTATAGcacttgagcccaggaggtccaggctgcagtaagccatgattgca-ggactatactccagcatgggtgacacagtgagaccccgtctctaaaaaaaTTGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39909542 225 + 64411610 TCAATGTGGGCCTTCTGAATGGAGGTGGGGCCTGTGGCCAGGTCCACGTATGGGGATCTGGGAAGGACGGGACCTTTGCTCTGTCAGCTGTGGAATGGACAAGAGCTACCCTTGACTTTCAGTATAGcacttgagcccaggaggtccaggctgcagtaagccatgattgca-ggactatactccagcatgggtgacacagtgagaccccgtctctaaagaaaaTGA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63920288 204 - 106955855 TCAATGCGGGCCTTCTGAATGCAGGTGGGGCCTGTGGCCAGGTCCACGTATGGGGATCTAGGAAGGACAGGACCTTTGCTCTGTCAGCTGTGGAATGGACAAGAGCTACCCTTGACTTTCAGTAAAGCATTGgagcccaggaggtcaaggctgcagtgagccatgattgca-ggactgtactccagcatgggcaacacagtg---------------------tga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30234196 224 + 53671032 TCAATGCGGGACTTCTGAATGCAGGTGGGG-CTGTGGCCAGGTCCACATATGGGGATCTGGGAAGGACAGGACCTTTGCTCTGTCAGCTGTGGAATGGACAAGAGCTACTCTTGAC-TTCAGTATAGcacttgaagcccaggagtcaaggctgcagtgagccatgattgcaggaactatactccagcatgggcgacagagtgggatcccatctctaaaaaaaaTGA i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4557412 224 - 13342542 TCAATGCGGGACTTCTGAATGCAGGTGGGGCCTGTGGCCAGGTCCACATATGGGGATCTGGGAAGGACAGGACCTTTGCTCTGTCAGCTGTGGAATGGACAAGAGCTACTCTTGACTTTCAGTATAGcacttgagcccaggaggtcaaggctgcagtgagccatgattgca-gaactatactccagcatgggcgacagagtgggatcccatctct-aaaaaaaTGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5484509 224 + 7714307 TCAATGCGGGACTTCTGAATGCAGGTGGGGCCTGTGGCCAGGTCCACATATGGGGATCTGGGAAGGACAGGACCTTTGCTCTGTCAGCTGTGGAATGGACAAGAGCTACTCTTGACTTTCAGTATAGcacttgagtccaggaggtcaaggctgcagtgagccatgattgca-gaactatactccagcatgggcgacagagtgagatcccatctct-aaaaaaaTGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29290359 224 + 50890351 TCAATGCGGGACTTCTGAATGCAGGTGGGGCCTGTGGCCAGGTCCACATATGGGGATCTGGGAAGGACAGGACCTTTGCTCTGTCAGTTGTGGAATGGACAAGAGCTACTCTTGACTTTCAGTATAGcacttgagcccaggaggtcaaagctgcagtgagccatgattgca-aaactatactccagcatgggcgacagagtgagatcccacctct-aaaaaaaTGA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2362501 224 + 4274983 TCAACGCGGGCCTTCTGAATGCAGGTGGGGCCTGTGGCCAGGTCCACATATGGGGATCTGGGAAGGACAGGACCTTTGCTCTGTCAGCTGTGGAATGGACAAGAGCTACTCTTGACTTTCAGTATAGcacttgagcccaggaggtcaaggctgcagtgagccatgattgca-ggactatactccagcatgggcaacagagtgagatcccatctct-aaaaaaaTGA i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5506360 134 + 5549422 CCAGCACAGGCCTTCTGAGCTAAAGCAGGGCCTGTGGCTAGGTCCACATACCTGAATCTGGG-AGGACAGGGCCTTGGCTTTGTCAGCTATAGAATGAACTGAAGATACACCTGGTGTTAAGCATAGC--------------------------------CCA-----ACA-A----------------------------------------------------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 596212 90 + 2501019 I e micMur3.chr22 3981622 90 - 30143674 I e dasNov3.JH563638 372207 0 + 643850 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e macFas5.chr19 34686617 2923 + 59248254 M e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=527721.000000 s hg38.chr19_GL383574v1_alt 99557 132 + 155864 CTCCAAGGCCACAG-TCCTATG-GCTCCACCAACACTAGAACTGTGCCTAGGGTCCCTCCCCAACACACCTGTCCTTCCTTTCCTGGTTATAAGAGCCCTTAGACTCCCTGGGAGTTTGTA-GGACCTAG-AAAAT s panTro5.chr19 36167511 132 + 61309027 CTCCAAGGCCACAG-TCCTATG-GCTCCACCAACACTAGAACTGTGCCTAGGGTCCCTCCCCAACACACCTGTCCTTCCTTTCCTGGTTATAAGAGCCCTTAGACTCCCTGGGAGTTTGTA-GGACCTAG-AAAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39909767 132 + 64411610 CTCCAAGGCCACAG-TCCTATG-GCTCCACCAACACTAGAACTGTGCCTAGGGTCCCTCCCCAACACACCTGTCCTTCCTTTCCTGGTTATAAGAGCCCTTAGACTCCCTGGGAGTTTGTA-GGACCTAG-AAAAT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63920492 132 - 106955855 ctcCAAGGCCACAG-TCCTATG-GCTCCACCAACACTACAACTGTGCCTAGAGTCCCTCCCCAACACACCTGTCCTTTCTTTCCTGGTTATAAGAGCCCTTAGACTCCCTGGGAGTTTGTA-GGACCTAG-AAAAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30234420 134 + 53671032 CTCCAAGGTCACAG-TCCTATGCGCTCCACCAACACTAGAACTGTGCCTAGGGT-CCTCCCCAACACACCTGTCCTTCCTTTCCTGGTTATAAGAGCCCTTAGACTCCCTGGGAGTTTGTAGGGACCTAGAAAAAT i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4557636 132 - 13342542 CTCCAAGGTCACAG-TCCTATG-GCTCCACCAACACTAGAACTGTGCCTAGGGTCCCTCCCCAACACACTTGTCCTTCCTTTCCTGGTTATAAGAGCCCTTAGACTCCCTGGGAGTTTGTA-GGACCTAG-AAAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5484733 125 + 7714307 CTCCAAGGTCACAG-TCCTATG-GCTCCACCAACACTAGAACTGTGCCTAGGGTCCCTCCCCAACACACCTGTGCTTCCTTTCCTGGTTATAAGAGCCCTTAGACTCCCTGGGAGTTTGTA--------G-GAAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29290583 132 + 50890351 CTCCAAGGTCACAG-TCCTATG-GCTCCACCAACACTAGAACTGTGCCTAGGGTCCCTCCCCAACACACCTGTCCTTCCTTTCCTGGTTATAAGAGCCCTTAGACTCCCTGGGAGTTTGTA-GGACCTAG-AAAAT i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2362725 132 + 4274983 CTCCAAGGTCACAG-TCCTATG-GCTCCACCAACACTAGAACTGTGCCTAGGGTCCCTCCCCAACACACCTATCCTTCCTTTCCTGGTTATAAGAGCCCTTAGACTCCCTGGGAGTTTGCA-GGACCTAG-AAAAT i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5506494 118 + 5549422 -TCCAAGACCACAGCCCCTGTG-GCTCCACCGGCACCAGAACTCTGTCTGGGTTCCCGCCCCA--ACACTTTTCCTTCCTTTCCTAA------------ATAGAACCCCTGGTAGTCTGTG-GAACCAGG-AAAAT i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 372207 128 + 643850 CCCCAAGTCTGTAGCCCCCGTA-GCTCCAACAACACCAAAAC----CCTAGGTTCCCTCCCCAACACACCTTTCCTTTCTGTCCTGGTTATAAAAGCCCTTGGACCTTC-AGCAGCCTGTG-GGACCTGG-AAAAT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 596212 90 + 2501019 I e micMur3.chr22 3981622 90 - 30143674 I e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e macFas5.chr19 34686617 2923 + 59248254 M e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=32368.000000 s hg38.chr19_GL383574v1_alt 99689 9 + 155864 CTCCCTTCC s panTro5.chr19 36167643 9 + 61309027 CTCCCTTCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39909899 9 + 64411610 CTCCCTTCC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63920624 9 - 106955855 CTCCCTCCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30234554 9 + 53671032 CTCCCTCCT i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4557768 9 - 13342542 CTCCCTCCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5484858 9 + 7714307 CTCCCTCCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29290715 9 + 50890351 CTCCCTCCT i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2362857 9 + 4274983 CTCCCTCCT i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5506612 9 + 5549422 CTCCTTCCC i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 596212 90 + 2501019 I e micMur3.chr22 3981622 90 - 30143674 I e dasNov3.JH563638 372335 0 + 643850 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e macFas5.chr19 34686617 2923 + 59248254 M e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=567420.000000 s hg38.chr19_GL383574v1_alt 99698 190 + 155864 gctaggcacggcggctcacacctgtagcccagcacaaggcgggaggatcgcttgagccca-ggagtttgagaccagcct-gggcaacatagggaga-ccctgtctttacaaaataaacataaaaaaatagccgggcatggtggtgc--atgccggtag-tcccagctatgggaggctgaggtgggagg--atcacttg s panTro5.chr19 36167652 192 + 61309027 gctaggcacgacggctcacacctgtagcccagcacaaggcgggaggatcgcttgagccca-ggagtttgagaccaccct-gggcaacatagggaga-ccctgtctttacaaaataaacataaaaaaatagctgggcatggtggtgc--atgccggtag-tcccagctatgggaggctgaggtgggaggccatcacttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39909908 192 + 64411610 gctaggcacggcggctcacacctgtagcccagcacaaggcgggaggatcgcttgagccca-ggagtttgagaccaccct-gggcaacatagggaga-ccctgtctttacaaaataaacataaaaaaatagctgggcatggtggtgc--atgccggtag-tcccagctatgggaggctgaggtgggaggccatcacttg i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63920633 190 - 106955855 gctgggcacggtggctcacacctgtagcccggcacaaggcgggaggatcgcttcagccca-ggagtttgagaccagcct-gggcaacatagggaga-ccctgtctctacaaaataaaaataaaaaaatagccgggcatggtggtgc--atgcctgtag-tcccagctatgggaggctgaggtgggagg--atcacttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30234563 192 + 53671032 gctgggcacggaggctcacacctgtagcccagcacaaggcgagaggatcgcttgagcctagggagtttgagaccagcctggggcaacatagg--gacccctgtctctacaaaataaaaatt-aaaaatagccgggcatggtggttcatgtgcctgtagttcccagctatgggaggctgaggtggga-g--atcacttg i rheMac8.chr19 C 0 I 936 s macNem1.NW_012011689v1 4557777 191 - 13342542 gctgggcacggaggctcacacctgtagcccagcacaaggcgagaggatcgcttgagccta-ggagtttgagaccagcct-gggcaacatagggagacccctgtctctacaaaataaaaattaaaaaatagccgggcatggtggtgc--gtgcctgtag-tcccagctacgggaggctgaggtgggagg--atcacttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5484867 191 + 7714307 gctgggcatggaggctcacacctgtagcccagcacaaggcgagaggatcgcttgagccca-ggagtttgagatcagcct-gggcaacatagggagacccctgtctctacaaaataaaaataaaaaaatagccgggcatggtggtgc--gtgcctgtag-tcccagctacaggaggctgaggtgggagg--atcacttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29290724 191 + 50890351 gctaggcacggaggctcacacctgtagccctgcacaaggcgagaggatcgcttgagccca-ggagtttgagaccagcct-gggcaacatagggagacccctgtctctacaaaataaaaataaaaaaatagccaggcatggtggtgc--atgcctgtag-tcccagctacgggaggctgaggtgggagg--atcacttg i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2362866 191 + 4274983 gctgggcacgggggctcacacctgtagcccagcacaaggcgagaggatcgcttgagccca-ggagtttgagaccagcct-gggcaacataaggagacccctgtctctacaaaataaaaattaaaaaatagccgggcatggtggtgc--gtgcctgtag-tcccagctacgggaggctgaggtgggagg--atcacttg i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 596212 90 + 2501019 I e micMur3.chr22 3981622 90 - 30143674 I e dasNov3.JH563638 372335 0 + 643850 C e otoGar3.GL873654 5506621 0 + 5549422 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e macFas5.chr19 34686617 2923 + 59248254 M e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=88496.000000 s hg38.chr19_GL383574v1_alt 99888 35 + 155864 agccagggagattgaggctgcagtgagctgagatc s panTro5.chr19 36167844 35 + 61309027 agccagggagattgaggctgcagtgagctgagatc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910100 35 + 64411610 agccagggagattgaggctgcagtgagctgagatc i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63920823 35 - 106955855 agccagggaggttgaggctgcagtgaactgagatt i nomLeu3.chr10 C 0 C 0 s macNem1.NW_012011689v1 4557968 35 - 13342542 agtcagggaggttgaggctgcagtgagctgagatc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5485058 35 + 7714307 agtcagggaggttgaggctgcagtgagctgagatc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29290915 35 + 50890351 agtcagggaggttgaggctgcagtgagctgagatc i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2363057 35 + 4274983 agtcagggaggttgaggctgcagtgagctgagatc i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 596212 90 + 2501019 I e micMur3.chr22 3981622 90 - 30143674 I e dasNov3.JH563638 372335 0 + 643850 C e otoGar3.GL873654 5506621 0 + 5549422 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e macFas5.chr19 34686617 2923 + 59248254 M e rheMac8.chr19 30234755 936 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=284787.000000 s hg38.chr19_GL383574v1_alt 99923 78 + 155864 aggccac-tgcactccagcctgggcaacagagcaataccctgtctcacaaaaaaagaaagaaagaaggaaaaagaaAAA s panTro5.chr19 36167879 78 + 61309027 aggccac-tgcactccagcctgggcaatagagcaataccctgtctcacaaaaaaagaaagaaagaaggaaaaagaaAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910135 77 + 64411610 aggccac-tgcactccagcctgggcaacagagcaataccctgtctcacaaaaaaag-aagaaagaaggaaaaagaaaAA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63920858 79 - 106955855 aggccacttgcactccatcctgggcaacagagcaagaccctgattcacaaaaaaagaaagaaagaaggaaaaagaaaaA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30235691 74 + 53671032 AGgccac-tgcactccagcctgggcaacagagcaagaccctgtctcacaaaaa----aagaaagaaggaaaaagaaaaa i rheMac8.chr19 I 936 C 0 s macFas5.chr19 34689540 74 + 59248254 AGgccac-tgcactccagcctgggcaacagagcaagaccctgtctcacaaaaa----aagaaagaaggaaaaagaaaaa i macFas5.chr19 M 2923 C 0 s macNem1.NW_012011689v1 4558003 74 - 13342542 aggccac-tgcactccagcctgggcaacagagcaagaccctgtctcacaaaaa----aagaaagaaggaaaaagaaaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5485093 73 + 7714307 aggccac-tgcactccagcctgggcaacagagcaagaccctgtctcacaaaaa----aagaaaggaggaaaaag-aaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29290950 74 + 50890351 aggccac-tgcactccagcctgggcaacagagcaagaccctgtctcacaaaaa----aagaaagaaggaaaaagaaaaa i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2363092 74 + 4274983 aggccac-tgcactccagcctgggcaacagagcaagaccctgtctcacaaaaa----aagaaagaaggaaaaagaaaaa i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 596212 90 + 2501019 I e micMur3.chr22 3981622 90 - 30143674 I e dasNov3.JH563638 372335 0 + 643850 C e otoGar3.GL873654 5506621 0 + 5549422 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=6715.000000 s hg38.chr19_GL383574v1_alt 100001 5 + 155864 -GAAAA s panTro5.chr19 36167957 5 + 61309027 -GAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910212 5 + 64411610 -GAAAA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63920937 5 - 106955855 -AAAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30235765 5 + 53671032 -aAAAA i rheMac8.chr19 C 0 I 2 s macFas5.chr19 34689614 5 + 59248254 -aAAAA i macFas5.chr19 C 0 I 2 s macNem1.NW_012011689v1 4558077 5 - 13342542 -aAAAA i macNem1.NW_012011689v1 C 0 I 2 s cerAty1.NW_012005268v1 5485166 5 + 7714307 -aaaaa i cerAty1.NW_012005268v1 C 0 I 2 s chlSab2.chr6 29291024 5 + 50890351 -aAAAA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2363166 4 + 4274983 -aATA- i colAng1.NW_012111697v1 C 0 C 0 s dasNov3.JH563638 372335 5 + 643850 GTACA- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 596212 90 + 2501019 I e micMur3.chr22 3981622 90 - 30143674 I e otoGar3.GL873654 5506621 0 + 5549422 C e mm10.chr7 111121444 560 - 145441459 I e canFam3.chr1 4637749 219 - 122678785 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=21858.000000 s hg38.chr19_GL383574v1_alt 100006 13 + 155864 CCTCCCCACCGT----------G- s panTro5.chr19 36167962 13 + 61309027 CCTCCCCACCGT----------G- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910217 13 + 64411610 CCTCCCCACCGT----------G- i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63920942 13 - 106955855 CCTCCCCACCGT----------G- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30235772 12 + 53671032 CCTCCCCATTGT------------ i rheMac8.chr19 I 2 C 0 s macFas5.chr19 34689621 12 + 59248254 CCTCCCCATTGT------------ i macFas5.chr19 I 2 C 0 s macNem1.NW_012011689v1 4558084 12 - 13342542 CTTCCCCATTGT------------ i macNem1.NW_012011689v1 I 2 C 0 s cerAty1.NW_012005268v1 5485173 12 + 7714307 CCTCCCCATTGT------------ i cerAty1.NW_012005268v1 I 2 C 0 s chlSab2.chr6 29291029 17 + 50890351 CCTCCCCATTGTGCAGA------- i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2363170 17 + 4274983 CTTACCCATTGT-----GCAGA-- i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4637968 12 - 122678785 CCCTCCCACTGT------------ i canFam3.chr1 I 219 I 1 s dasNov3.JH563638 372340 13 + 643850 CATACACACTGA-----------G i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 596212 90 + 2501019 I e micMur3.chr22 3981622 90 - 30143674 I e otoGar3.GL873654 5506621 0 + 5549422 C e mm10.chr7 111121444 560 - 145441459 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=8580.000000 s hg38.chr19_GL383574v1_alt 100019 6 + 155864 CAGACC s panTro5.chr19 36167975 6 + 61309027 CAGACC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910230 6 + 64411610 CAGACC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63920955 6 - 106955855 CAGACC i nomLeu3.chr10 C 0 C 0 s otoGar3.GL873654 5506621 4 + 5549422 --CACT i otoGar3.GL873654 C 0 I 2 s canFam3.chr1 4637981 6 - 122678785 CAGACC i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 372353 6 + 643850 CAGACC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 596212 90 + 2501019 I e micMur3.chr22 3981622 90 - 30143674 I e mm10.chr7 111121444 560 - 145441459 I e chlSab2.chr6 29291046 0 + 50890351 C e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e colAng1.NW_012111697v1 2363187 0 + 4274983 C e manLeu1.NW_012102454v1 918361 1683 - 2385121 I e cerAty1.NW_012005268v1 5485185 0 + 7714307 C e macNem1.NW_012011689v1 4558096 0 - 13342542 C e macFas5.chr19 34689633 0 + 59248254 C e rheMac8.chr19 30235784 0 + 53671032 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=475139.000000 s hg38.chr19_GL383574v1_alt 100025 110 + 155864 GCAGATCTTCACAGCTAGTAAC--TGGTGGGTGTAGTCTCTA-GGTGGCCCCTAGTCCCTTGAGTAGCTCACCCTC--------------------------------------------------cacaaacacacacacacacaca--------------------caTCTAGACACTGTC s panTro5.chr19 36167981 108 + 61309027 GCAGATCTTCACAGCTAGTAAC--TAGTGGGTGTAGTCTCTA-GGTGGCCCCTAGTCCCTTGAGTAGCTCACCCTC--------------------------------------------------cacaaacacacacacacacaca----------------------TCTAGATACTGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910236 108 + 64411610 GCAGATCTTCACAGCTAGTAAC--TAGTGGGTGTAGTCTCTA-GGTGGCCCCTAGTCCCTTGAGTAGCTCACCCTC--------------------------------------------------cacaaacacacacacacacaca----------------------TCTAGATACTGTT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63920961 130 - 106955855 GCAGATCTTCACAGCTGGTAAC--TGGTGGGTGTAGTCTCCA-GGTGGCCCCTAGTCCCTTGAGTAGCTCACCCTC--------------------------------------------------cacacacacacacacacacacacacacacacacacacacacacaTCTAGATACTGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30235784 157 + 53671032 GCAGATCTTCACAGCTGGTAAC--TGATGGATATAGTCTCCA-GGTGGCCCCTAGTCCCTTGAGTAGCTCACCCTCcacacacacacccacacacaaacacacacacacacacacacaaacacacacacacacacacacacacacaca-----------------------caAGATACTGTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34689633 157 + 59248254 GCAGATCTTCACAGCTGGTAAC--TGATGGATATAGTCTCCA-GGTGGCCCCTAGTCCCTTGAGTAGCTCACCCTCcacacacacacccacacacaaacacacacacacacacacacaaacacacacacacacacacacacacacaca-----------------------caAGATACTGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4558096 107 - 13342542 GCAGATCTTCACAGCTGGTAAC--TGATGGATATAGTCTCCA-GGTGGCCCCTAGTCCCTTGAGTAGCTCACCCTC--------------------------------------------------cacacacacacacacacacaca-----------------------caAGATACTGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5485185 135 + 7714307 GCAGATCTTCACAGCTGGTAAC--TGATGGATATAGTCTTCA-GGTGGCCCCTAGTGCCTTGAGCAGCTCACCCTCcacacacacacccacacacaaacacaca----------------------cacacacacacacacacacaca-----------------------AAAGATACTGTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291046 118 + 50890351 -----TCTTCACAGCTGGTAAC--TGATGGATATAGTCTTCA-GGTGGCCCCTAGTCCCTTGAGTAGCTCACCCTCcac------------------acacacaaacaca----------------cacacacacacacacgcacaGA-----------------------CAAGATACTGTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920044 140 - 2385121 GCAGATCTTCACAGCTGGTAAC--TGATGGATATAGTCTCCA-GGTGGCCCC-AGTCCCTTGAGTAGCTCACCCTCcacacacacccccacacacaaacacacacacaca----------------cacacacacacacacacacaca-----------------------cacGATACTGTT i manLeu1.NW_012102454v1 I 1683 C 0 s colAng1.NW_012111697v1 2363187 132 + 4274983 -----TCTTCACAGCTGGTAAC--TGATGGATATAGTCTCCA-GGTGGCCCCTAGTCCCTTGAGTAGCTCACCCTCcacacacacacacacacacacacacacaca--------------------caaacacacacacacacacaca-----------------------caAGATACTGTT i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5506627 101 + 5549422 GCAGACCTTAACAGCAGGTGACTGTGATGGG-ACAGTCTCCA-GGTTTTCCCTAGTCCCTCCATCAGGTCACCCTC--------------------------------------------------CACACACACGTACAT------------------------------CTGGATACCTTT i otoGar3.GL873654 I 2 C 0 s canFam3.chr1 4637987 83 - 122678785 ----------ACGGCCGGTCTCGGTGACGGGC----CATCAC-GGTGGTCCCTA-TCCTCCTAGCAGCCCCCCTCC--------------------------------------------------CCCTC---------CACATACT-----------------------CCAGACACCT-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 372359 91 + 643850 -------TTCACAGCTGATAGCTGTGGTGGGTGCAGCCTCCAGGGTAGTCCTTAGTCTATC---CAACTCAC------------------------------------------------------CATATCTACATACCCAGCCAAC-----------------------CCATCTA----- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 596212 90 + 2501019 I e micMur3.chr22 3981622 90 - 30143674 I e mm10.chr7 111121444 560 - 145441459 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=560408.000000 s hg38.chr19_GL383574v1_alt 100135 68 + 155864 GCTTCACCAAGCCTTCGAGAGCCCTCAGGAAGCCCTGCAGCA------GCTCCTCCTACCTGTACCTTAGGTTT- s panTro5.chr19 36168089 68 + 61309027 GCTTCACCAAGCCCTCGAGAGCCCTCAGGAAGCCCTGCAGCA------GCTCCTTCTACCTGTACCTTCGGTTT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910344 68 + 64411610 GCTTCACCAAGCCCTCGAGAGCCCTCAGGAAGCCCTGCAGCA------GCTCCTCCTACCTGTACCTTCGGTTT- i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921091 68 - 106955855 GCTTCACCAAGCCCTAGAGAGCCCTCAGGGAGCCCTGCAGCA------GTTCCTCCTACCTGTACCTTAGGTTT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30235941 68 + 53671032 GCTTCACCAAGCCCTAGAGAGCCCTCAGGGAGCCCTGCAGCA------GCTCCTCCTACCTGTACCTTAGGTTT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34689790 68 + 59248254 GCTTCACCAAGCCCTAGAGAGCCCTCAGGGAGCCCTGCAGCA------GCTCCTCCTACCTGTACCTTAGGTTT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4558203 68 - 13342542 GCTTCACCAAGCCCTAGAGAGCCCTCAGGGAGCCCTGCAGCA------GCTCCTCCTACCTGTACCTTAGGTTT- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5485320 68 + 7714307 GCTTTACCAAGCCCTAGAGAGCCCTCAGGGAGCCCTGCAGCA------GCTCCTCCTACCTGTACCTTAGGTTT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291164 68 + 50890351 GCTTCACCAAGCCCTAGAGAGCCCTCAGGGAGCCCTGCAGCA------GCTCCTCCTACCTGTACCTTAGGTTT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920184 68 - 2385121 GCTTCACCAAGCCCTAGAGAGCCCTCAGGGAGCCCTGCAGCA------GCTCCTCCTACCTGTACCTTAGGTTT- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2363319 68 + 4274983 GCTTCACCAAGCCCTAGAGAGCCCTCCGGGAGCCCTGCAGCA------GCTCCTCCTACCTGTACCTTAGGTTT- i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3981712 68 - 30143674 GCTTCACCAAGCTCTTGAGAGCCTTCTGGGAGCCCCACAGTA------GCTCCTCCTGCTTGTATCTTAGGTTT- i micMur3.chr22 I 90 I 196 s proCoq1.NW_012149263v1 596302 68 + 2501019 GCTTCAGCAAGCCCTCGAGAACCTTCTCGGAGCCCCACAGTA------GCTCCTCCTGCCTGTATCTTAGGTTT- i proCoq1.NW_012149263v1 I 90 I 21 s otoGar3.GL873654 5506728 67 + 5549422 GCTTCACCAAGCCCG-GAGAGCCTTCTGGGAGCCCCACAGCA------GCTCCTACTGCCTCTATCATAGGTTT- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4638070 67 - 122678785 GTTTCCCCAAGCCCCGCAGAGCCCCCGGGGAGACCC-CAGCA------GCTCCCCCTGCCTGGGCCTCACATGT- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 372450 63 + 643850 -CTTCGCAGAGCC-----------TCAAGAACCTGCGCAGCACACTGGTTCCCTCCTACCTCTATCTTAAGGGTT i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111121444 560 - 145441459 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=104051.000000 s hg38.chr19_GL383574v1_alt 100203 26 + 155864 -CTCTGTCTCCACACCACCCCAGCAGC s panTro5.chr19 36168157 26 + 61309027 -CTGCGTCTCCACACCACCCCAGCAGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910412 26 + 64411610 -CTGCGTCTCCACACCACCCCAGCAGC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921159 26 - 106955855 -CTCCGTCTCCACACTACCCCAGCAGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30236009 26 + 53671032 -CTCCATCTCCACACCACCCCAGCAGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34689858 26 + 59248254 -CTCCATCTCCACACCACCCCAGCAGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4558271 26 - 13342542 -CTCCATCTCCACACCACCCCAGCAGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5485388 26 + 7714307 -CTCCATCTCCACACCACCCCAGCAGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291232 26 + 50890351 -CTCCATCTCCACACCACCCCAGCAGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920252 26 - 2385121 -CTCCATCTCCACACCACCCCAGCAGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2363387 26 + 4274983 -CTCCATCTCCACACCACCCCAGCAGC i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5506795 21 + 5549422 -TTCCAACCCCTCTCT--CCAAGC--- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4638137 5 - 122678785 -----------------TCCCG----- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 372513 22 + 643850 TTCTTATTCCCACCTGGGCCTG----- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 596370 21 + 2501019 I e micMur3.chr22 3981780 196 - 30143674 I e mm10.chr7 111121444 560 - 145441459 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=310418.000000 s hg38.chr19_GL383574v1_alt 100229 49 + 155864 CTGTTACTCAGGACCTTGCAGACGG--TAAAATCAACAACGTGGTACCAGA s panTro5.chr19 36168183 49 + 61309027 CTGTTACTCAGGACCTTGCAGATGG--TAAAATCAACAACGTGGTACCAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910438 49 + 64411610 CTGTTACTCAGGACCTTGCAGACGG--TAAAATCAACAACGTGGTACCAGA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921185 49 - 106955855 CTGTTACTCAGGACCTTGCAGACGG--TAAAATCAACAACGTGGTACCAGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30236035 49 + 53671032 CTGTTACTCAGGACTTTGCAGACAG--TAAAATCAACAACATGGTATCAGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34689884 49 + 59248254 CTGTTACTCAGGACTTTGCAGACAG--TAAAATCAACAACATGGTATCAGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4558297 49 - 13342542 CTGTTACTCAGGACTTTGCAGACAG--TAAAATCAACAACATGGTATCAGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5485414 49 + 7714307 CTGTTACTCAGGACTTTGCAGACGG--TAAAATCAACAACATGGTATCAGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291258 49 + 50890351 CTGTTACTCAGGACTTTGCAGACGG--TAAAATCAACAACATGGAATCAGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920278 49 - 2385121 CTGTTACTCAGGACTTTGCAGACGG--TAAAATCAACAACATGGTATCAGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2363413 49 + 4274983 CTGTTACTCAGGACTTTGCAGACGG--TAAAATCAACAACATGGTATCAGA i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 596391 49 + 2501019 CTGTTACTCTGGACCTCGCAGACAG--AGAAATCAACAAAGCAGTACCAGG i proCoq1.NW_012149263v1 I 21 C 0 s otoGar3.GL873654 5506816 49 + 5549422 CTGTTACTCTGAACCTCACAGACAG--AGAAATCCACAAAGTAATACCAGG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4638142 14 - 122678785 -------------------------------------AAGATGCTACCTGG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 372535 51 + 643850 TTGTTACTGAAGTACTTGCAGCCAAACAGAAATCAACAAGGCTGTACCAGG i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3981780 196 - 30143674 I e mm10.chr7 111121444 560 - 145441459 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=844442.000000 s hg38.chr19_GL383574v1_alt 100278 103 + 155864 CCTCCTGTCCTGGCTGCAGTGGAAGGGGCCTGGACTCCTGG---GGTCCAGTCT----------ACCCATCAGAGATCTCCCAGGCTCCTGGCCAGCcccagaccacgaggacaat s panTro5.chr19 36168232 103 + 61309027 CCTCCTGTCCTGGCTGCAGTGGAAGGGGCCTGGACTCCTGG---GGTCCAGTCT----------ACCCATCAGAGATCTCCCAGGCTCCTGGCCAGCcccagaccacgaggacaat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910487 103 + 64411610 CCTCCTGTCCTGGCTGCAGTGGAAGGGGCCTGGACTCCTGG---GGTCCAGTCT----------ACCCATCAGAGATCTCCCAGGCTCCTGGCCAGCcccagaccacgaggacaat i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921234 103 - 106955855 CCTCTTGTCCTGGCTGCAGTGGAAGGGGCCTGGACTCCTGG---GGTCCAGTCT----------ACCCATCAGAGATCTCCCAGGCTCCTGGCCAGCCCCAGATCACGAAGACAAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30236084 103 + 53671032 CCTCTTGTCCTGGCTGCAGTGGAAGGGGCCTGGACTCCTGG---GGTCCAGCTC----------ACCCATCAGAAATCTCCCAGGCTCCTGGCCAGCACCAGACCACGAGGACAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34689933 103 + 59248254 CCTCTTGTCCTGGCTGCAGTGGAAGGGGCCTGGACTCCTGG---GGTCCAGCTC----------ACCCATCAGAAATCTCCCAGGCTCCTGGCCAGCACCAGACCACGAGGACAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4558346 103 - 13342542 CCTCTTGTCCTGGCTGCAGTGGAAGGGGCCTGGACTCCTGG---GGTCCAGCTC----------ACCCATCAGAAATCTCCCAGGCTCCTGGCCAGCACCAGACCACGAGGACAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5485463 103 + 7714307 CCTCTTGTCCTGGCTGCAGTGGAAGGGGCCTGGACTCCTGG---GGTCCAGCTC----------ACCCATCAGAAATCTCCCAGGCTCCTGGCCAGCACCAGACCACGAGGACAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291307 103 + 50890351 CCTCTTGTCCTGGCTGCAGTGGAAGGGGCCTGGACTCCTGG---AGTCCAGCTC----------ACCCATCAGAAATCTCCCAGGCTCCTGGCCAGCACCAGACCACGAGGACAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920327 103 - 2385121 CCTCTTGTCCTGGCTGCAGTGGAAGGGGCCTGGACTCCTGG---GGTCCAGCTC----------ACCCATCAGAAATCTCCCAGGCTCCTGGCCAGCACCAGACCACGAGGACAAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2363462 103 + 4274983 CCTCTTGTCCTGGCTGCAGTGGAAGGGGCCCGGACTCCTGG---GGTCCAGCTC----------ATCCATCAGGGATCTCCCAGGCTCCTGGCCAGCACGAGACCACGAGGACAAT i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 596440 96 + 2501019 CCTCTTGTCCTGGCTGCAGAGGAA-------GGACTCCTGG---GGTCCAGCCC----------ACCCATAGGGCATCTCCCAGGCTCCTGGACAGCTGCAGACCCTCAGAACAAT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5506865 103 + 5549422 CCTCTCATCCTAGCTGCAAAGGAAGGGGCTTGGACTTCTGG---GGTCCAGCCC----------ACCCATCAGGGACCTTCTAGGCTCCTGGACAGCTACAGACCCTCAGAACCAT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111122004 102 - 145441459 CCCCTTGTCTTAGCTTCAGTCAAAGGAGCTTGGAATCTTGG---GG-CCAGCCC----------AGATGTTAGGAATTTCCCAGGCTCTTGGCCAGCTCCAAATCCCTACAACAAT i mm10.chr7 I 560 I 736 s canFam3.chr1 4638156 114 - 122678785 CATCCTGTCCCGGCTGCAG-GGAAGGGGCCAGGCCTCCAGGGTCGGTGCAGCCCCCCTCTCCCGCCCCATCAGGGATCTCCC-GGCCCCTGGCCACCCTCAGCCCATCAGAACCAT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 372586 85 + 643850 CCTCCTGCC----------TAGAAGGGGCCTGGACTCTTGG---GGTCCAGCCC----------ACCCATCAGAGAT--------CTCCTGGTTGGCCTCAGACCCTCAGCACAAT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3981780 196 - 30143674 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=54945.000000 s hg38.chr19_GL383574v1_alt 100381 11 + 155864 -----------------------------------gcaaggtgacc----------------------------------------- s panTro5.chr19 36168335 11 + 61309027 -----------------------------------gcaaggtgacc----------------------------------------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910590 11 + 64411610 -----------------------------------gcaaggtgacc----------------------------------------- i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921337 11 - 106955855 -----------------------------------GCAAGgtgacc----------------------------------------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30236187 11 + 53671032 -----------------------------------GCAAGgtgacc----------------------------------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34690036 11 + 59248254 -----------------------------------GCAAGgtgacc----------------------------------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4558449 11 - 13342542 -----------------------------------GCAAGgtgacc----------------------------------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5485566 11 + 7714307 -----------------------------------GCAAGgtgacc----------------------------------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291410 11 + 50890351 -----------------------------------GCAAGgtgacc----------------------------------------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920430 11 - 2385121 -----------------------------------GCAAGgtgacc----------------------------------------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2363565 11 + 4274983 -----------------------------------GCAAGgtgacc----------------------------------------- i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 596536 11 + 2501019 -----------------------------------GCAAGGTGACC----------------------------------------- i proCoq1.NW_012149263v1 C 0 I 19 s otoGar3.GL873654 5506968 11 + 5549422 -----------------------------------GCAAGGTGACC----------------------------------------- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4638270 11 - 122678785 -----------------------------------GAAGAGCAACC----------------------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 372671 87 + 643850 CAAAGGCCAGCTGCCTAATGTGATAGACATTGCTGGCAATGGGGTCTGATCCTCTAACTACTGACACCAAGGAGTTTACTGTTGAAC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3981780 196 - 30143674 I e mm10.chr7 111122106 736 - 145441459 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=149792.000000 s hg38.chr19_GL383574v1_alt 100392 56 + 155864 atagctt-----------------------------------------------------------------------------actgcagc------------------------------------------------------------------------------------ctcaacctcctgggctcaaCGCACCCC---ACCGTATAGGCGGT s panTro5.chr19 36168346 56 + 61309027 atagctt-----------------------------------------------------------------------------actgcagc------------------------------------------------------------------------------------ctcaacctcctgggctcaaCGCACCCC---ACCGTATAGGTGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910601 56 + 64411610 atagctt-----------------------------------------------------------------------------actgcagc------------------------------------------------------------------------------------ctcaacctcctgggctcaaCGCACCCC---ACCGTATAGGTGGT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921348 56 - 106955855 atagctt-----------------------------------------------------------------------------actgcaga------------------------------------------------------------------------------------ctcagcctcctgggctcaaCGCACCCC---ACTGTATACGTGGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30236198 56 + 53671032 atagctt-----------------------------------------------------------------------------actgcagc------------------------------------------------------------------------------------ctcaatctcctgggctcaatgaacccc---actgtatcagTGGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34690047 56 + 59248254 atagctt-----------------------------------------------------------------------------actgcagc------------------------------------------------------------------------------------ctcaatctcctgggctcaatgaacccc---accgtatcagTGGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4558460 56 - 13342542 atagctt-----------------------------------------------------------------------------actgcagc------------------------------------------------------------------------------------ctcaatctcctgggctcaatgaacccc---accgtatcagTGGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5485577 56 + 7714307 atagctt-----------------------------------------------------------------------------actgcagc------------------------------------------------------------------------------------ctcaacctcctgggctcaaTGAACCCC---ACCGTATCGGTGGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291421 56 + 50890351 atagctt-----------------------------------------------------------------------------actgcagc------------------------------------------------------------------------------------ctcaacctcctgggctcaaTGAACCCC---ACCGTATTGGTGGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920441 56 - 2385121 atagctt-----------------------------------------------------------------------------actgcagc------------------------------------------------------------------------------------ctcaacctcctgggctcaaTGAACCCC---ACCGTATCGGTGGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2363576 56 + 4274983 atagctt-----------------------------------------------------------------------------actgcagc------------------------------------------------------------------------------------ttcaacctcctgtgctcaaTGAACCCC---ACCATATCGGTGGG i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5506979 18 + 5549422 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGG----------------ATCTTAGAGGTCAG i otoGar3.GL873654 C 0 I 1 s canFam3.chr1 4638281 18 - 122678785 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGG----------------ATGCTAGAGGTGTG i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 372758 220 + 643850 ATAGTCTGGAAAGGGGAAGAAAGTATTTACATATCAGTTAACTATGATAATCAAGATTTATAAAACAGGGATCTATTCATTAACACTGTATCATTCTCAATATGTATAAAGCATATTTTATTTAAAACATATATATAtgtgtgtgtatgtatatgtgtgtgtgtgtgtATAGTTTTTTTAACCTGGGGGGAAAAAGGCAAGCTGGGACCTTAGAGTTGGG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 596547 19 + 2501019 I e micMur3.chr22 3981780 196 - 30143674 I e mm10.chr7 111122106 736 - 145441459 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=42103.000000 s hg38.chr19_GL383574v1_alt 100448 5 + 155864 -GTGAG s panTro5.chr19 36168402 5 + 61309027 -GTGAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910657 5 + 64411610 -GTGAG i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921404 5 - 106955855 -GTGAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30236254 5 + 53671032 -GTGAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34690103 5 + 59248254 -GTGAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4558516 5 - 13342542 -GTGAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5485633 5 + 7714307 -GTGAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291477 5 + 50890351 -GTGAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920497 5 - 2385121 -GTGAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2363632 5 + 4274983 -GTGAG i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3981976 5 - 30143674 -GTGAG i micMur3.chr22 I 196 C 0 s proCoq1.NW_012149263v1 596566 5 + 2501019 -GTGAG i proCoq1.NW_012149263v1 I 19 C 0 s otoGar3.GL873654 5506998 5 + 5549422 -ACGAG i otoGar3.GL873654 I 1 C 0 s canFam3.chr1 4638300 4 - 122678785 -GTGG- i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 372978 6 + 643850 GATGAG i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111122106 736 - 145441459 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=1698571.000000 s hg38.chr19_GL383574v1_alt 100453 225 + 155864 ATAAAAGCAGATTATTCTGCCTGACAAGGGCCTCTTGGCCACAGCACAGCTGT-----------TTCCAGC-----------------------CAGTGG---------G-GG----CTGGGGCAGAGAGGGCACAACAAGGTCCTCAC-AGAGTTACGCACAGGGGAGAGAAG-------------GGGAGGGGAA------CTTCT--TCAGGGAAGCAGTCTGGAGACTGAGGGGGAGGGGTCCCCTTCCACACTTAACCCATGCTGTCCTCAGCCCTATT-C----------------------------------------------------------------------------------TTCCTGGGCT s panTro5.chr19 36168407 225 + 61309027 ATAAAAGCAGATTATTCTGCCTGACAAGGGCCTCTTAGCCACAGCACAGCTGT-----------TTCCAGC-----------------------CAGTGG---------G-GG----CTGGGGCAGAGAGGGCACAACAAGGTCCTCAC-AGAGTTATGCACAGGGGAGAGAAG-------------GGGAGGGGAA------CTTCT--TCAGGGAAGCATTCTGGAGACTGAGGGGGAGGGGTGCCCTTCCACACTTAACCCATGCTGTCCTCAGCCCTGTT-C----------------------------------------------------------------------------------TTCCTGGGCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910662 211 + 64411610 ATAAAAGCAGATTATTCTGCCTGACAAGGGCCTCTTAGCCACAGCACAGCTGT-----------TTCCAGC-----------------------CAGTGG---------G-GG----CTGGGGCAGAGAGGGCACAACAAGGTCCTCAC-AGAGTTATGCACAGGGGAGAGAAG-------------GGGAGGGGAA------CTTCT--TCAGGAAAGCAGTCTGGAGACTGAGGGGGAGGGGTGC--------------CCCATGCTGTCCTCAGCCCTGCT-C----------------------------------------------------------------------------------TTCCTGGGCT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921409 226 - 106955855 ATAAAAGCAGATTATTCTGCCTGGCAAGGGCCTCTTAGCCACAGCACAGCTGT-----------TTCCAGC-----------------------CAGTGG---------G-GG----CTGGGGCAGAGAGGGCACAACAAGGTCCTCAC-AGAGTTATGCACAGGGGAGAGAAG-------------GGGAGGGGAA------CTTCC--TCAGGGAAGCAGTCTGGAGACTGAGGGGGAGGGGTCCCCTTCCACACTTAACCCATGCTGTCCTCAGCCCTGTTCC----------------------------------------------------------------------------------TTCCTGGGCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30236259 221 + 53671032 ATAAAAGCAGATTACTCTGCCTGGCAAGGGCTTCTTAGCCACAGCACAACTGT-----------TTCCAGC-----------------------CAGTGG---------G-GG----CTGGGGCAGAGAGGGCACAACACGGTCCTCAC-AGAGTTAT-----GGGGAGAGAAG-------------GGAAGGGGAA------CTTCC--TCAGGGAAGCAGTTTGGAGACTGAGGGGGAGGGGTCCCCTTCCACACTTAACCCATGCTGCCCTCAGCTCTGTTCC----------------------------------------------------------------------------------TTCCTGGGCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34690108 221 + 59248254 ATAAAAGCAGATTACTCTGCCTGGCAAGGGCTTCTTAGCCACAGCACAACTGT-----------TTCCAGC-----------------------CAGTGG---------G-GG----CTGGGGCAGAGAGGGCACAACACGGTCCTCAC-AGAGTTAT-----GGGGAGAGAAG-------------GGAAGGGGAA------CTTCC--TCAGGGAAGCAGTTTGGAGACTGAGGGGGAGGGGTCCCCTTCCACACTTAACCCATGCTGCCCTCAGCTCTGTTCC----------------------------------------------------------------------------------TTCCTGGGCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4558521 221 - 13342542 ATAAAAGCAGATTACTCTGCCTGGCAAGGGCTTCTTAGCCACAGCACAACTGT-----------TTCCAGC-----------------------CAGTGG---------G-GG----CTGGGGCAGAGAGGGCACAACACGGTCCTCAC-AGAGTTAT-----GGGGAGAGAAG-------------GGAAGGGGAA------CTTCC--TCAGGGAAGCAGTTTGGAGACTGAGGGGGAGGGGTCCCCTTCCACACTTAACCCATGCTGCCCTCAGCTCTGTTCC----------------------------------------------------------------------------------TTCCTGGGCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5485638 221 + 7714307 ATAAAAGCAGATTACTCTGCCTGGCAAGGGCTTCTTAGCCACAGCACAACTGT-----------TTCCAGC-----------------------CAGTGG---------G-GG----CTGGGGCAGAGAGGGCACAACACGGTCCTCAC-AGAGTTAT-----GGGGAGAGAAG-------------GGAAGGGGAA------CTTCC--TCAGGGAAGCAGTTTGGAGACTGAGGGGGAGGGGTCCCCTTCCACACTTAACCCATGCTGCCCTCAGCTCTGTTCC----------------------------------------------------------------------------------TTCCTGGGCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291482 221 + 50890351 ATAAAAGCAGATTACTCTGCCTGGCAAGGGCTTCTTAGCCACAGCACAACTGT-----------TTCCAGC-----------------------CAGTGG---------G-GG----CTGGGGCAGAGAGGGCACAACACCGTCCTCAC-AGAGTTAT-----GGGGAGAGAAG-------------GGGAGGGGCA------CTTCC--TCAGGGAAGCAGTTTGGAGACTGAGGGGGAGGGGTCCCCTTCCACACTTAACCCATGCTGCCCTCAGCTCTGTTCC----------------------------------------------------------------------------------TTCCTGGGCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920502 226 - 2385121 ATAAAAGCAGATTACTCTGCCTGGCAAGGGCTTCTTAGCCACAGCACAACTGT-----------TTCCAGC-----------------------CAGTGG---------G-GG----CTGGGGCAGAGAGGGCACAACACGGTCCTCAC-AGAGTTATGCACAGGGGAGAGAAG-------------GGAAGGGGAA------CTTCC--TCAGGGAAGCAGTTTGGAGACTGAGGGGGAGGGGTCCCCTTCCACACTTAACGCATGCTGCCCTCAGCTCTGTTCC----------------------------------------------------------------------------------TTCCTGGGCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2363637 227 + 4274983 ATAAAAGCAGATTACTCTGCCTGGCAAGGGCCTCTTAGCCACAGCATGACTGT-----------TTCCAGC-----------------------CAGTGG---------G-GG----CTGGGGCAGAGCGGGCACAACACGGTCCTCACAAGAGTTATGCACAGGGGAGAGAAG-------------GGAAGGGGAA------CTTCC--TCAGGGAAGCAGTCTGGAGACTGAGGGGGAGGGGTCCCCTTCCACACTTAACCCATGCTGCCCTCAGCTCTGTTCC----------------------------------------------------------------------------------TTCCTGGGCT i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3981981 230 - 30143674 ACAAAAGCAGATGACTCTGCCTCACAAGGGCCTCTTGGCTACAGCACAGCTGT-----------TTCCAGC-----------------------CAATGG---------G-GG----GTGGGGTGGAGATG--ACAACGGGACACTCAG-ATAGTTACGCACAAGGGAAAGGAG-------------GGGAAGGGGGTGGCTTCTTCC--TCAGGGAAGCAATCTGGAGATTGAGGGAGTAGATTCCCCTTCTGTACATAATCCACACTGCCCTCAGCCCCGTTCC----------------------------------------------------------------------------------TGCCTGGGCT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 596571 227 + 2501019 ACAAAAGCAGATGACTCTGCCTCACAAGGGCCTCTTGGCTACAGCTCAGCTGT-----------TTCCAGC-----------------------CAATGG---------G-GG----GCGGGGTGGAGATG--ACAACAGGACACTCAG-ATAGTTATGCACAAGGGAAAGGAG-------------GGGAAAGGGGTGA---CTTCC--TCAGGGCAGCAATCTGGAGATGGAGGGAGAAGTTTCCCCTTCAGTACGTAATCCCTGCTGCCCTCGGCCCCCTTCC----------------------------------------------------------------------------------TGCCTGGGCT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5507003 318 + 5549422 ACAAAAGCAGATGACTCTGCCTGGCAATGATCTCTTGGCTACAACACAGCTGA-----------TTGCAGC-----------------------CAGTGGGGCGGAGCTG-GG----GGGAGGGGGGAATG--ACGAGAGGGTGCTCAG-ATAGTTATACACAGGGGAAAGGAG-------------AGAAAAGGGGTGA---CTTCA--CCAGGGAAGCAATCTGGAGATGGAGGGAGAAATTTCCCCTTCTGTATATAACCCATGCTACCCTCAGCCCCAttcttttttttttttttttgagacatagcctcaagctatccccctgggtagagtgccgtggcattacagcttacagcaacctccaattcctgggct i otoGar3.GL873654 C 0 I 206 s mm10.chr7 111122842 214 - 145441459 ACATAAACAAATGGCTC--CTTGGCTTGAGCCTCTTGGCTTCAACAC--------------------CAGC-----------------------CTGTGG---------A-GGTGATCAGGGTTGGAGAGT-----ACCGATGGCTCAG-ACAGTTATGTATGGGGGAAGGCAG-------------TGAAGGAGAG------CCTTCCATAGGGGGAGCAATCTGGAGACTAGGGGAGAGGTTTCCCCATCTGCACACAGCTCACGCTGCCCTCAACTCTGCTGC----------------------------------------------------------------------------------TGCCTGTC-- i mm10.chr7 I 736 C 0 s canFam3.chr1 4638304 196 - 122678785 ACAGAAGCAGGTGGCTGTGCCCC-CAAGGG-----------------------------------TCCAGC-----------------------CAGTGA---------G-GG--------AGCAGAGG----CCAACAGGAGGCTCAG-ATGCTCACAGGCAGGGGAAACGGG-------------TGGTGAGGAGTGA---CTTCC--TCCGGGAGGCAATCTCGAGAATGTGGGAGCAGTTTCCCCTGCGGCACATGACTCACGCTGCCCTCACCCCCTTTCC----------------------------------------------------------------------------------TGCCTGGGCC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 372984 276 + 643850 ACAGAAGCAGATGGCTCTGCCTGGCAAAGTCCTCTTGGCCACAGTACAGCCATTCAGCCCTAGGTCTCAGCAGGGTCTGAGTAGGAAGAGGAAGCAGTGG---------ATGG----TAGGGATGGAGAGAGGACAACGGGATACTCAG-ATGGTCATGC-TAGGGAAAAGAGGTGGGTGGGGGGCAGGGAAGGGAACGT---CTTTT--CCAGGGGAGCAATCTAGAGATTGTGAGAGAAAATTCCCCTTTGGACCATAACCCATGCCGCCCTTACCCTCAGTTA----------------------------------------------------------------------------------AGCCTGGGCC i dasNov3.JH563638 C 0 C 0 e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=268761.000000 s hg38.chr19_GL383574v1_alt 100678 30 + 155864 ATGCCACCTAAGC--C--ACTGGCCTGGCCTCAC s panTro5.chr19 36168632 30 + 61309027 ATGCCACCTAAGC--C--ACTGGCCTGGCCTCAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39910873 30 + 64411610 ATGCCACCTAAGC--C--ACTGGCCTGGCCTCAC i panPan2.chr19 C 0 I 1558 s nomLeu3.chr10 63921635 30 - 106955855 ATGCCACCTAAGC--C--ACTGGCCTGGCCTCAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30236480 30 + 53671032 ATGCCACCTAAGC--C--ACTGGCCTGGCCTCAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34690329 30 + 59248254 ATGCCACCTAAGC--C--ACTGGCCTGGCCTCAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4558742 30 - 13342542 ATGCCACCTAAGC--C--ACTGGCCTGGCCTCAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5485859 30 + 7714307 ATGCCACCTAAGC--C--ACTGGCCTGGCCTCAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291703 30 + 50890351 ATGCCACCTAAGC--C--ACTGGCCTGGCCTCAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920728 30 - 2385121 ATGCCACCTAAGC--C--ACTGGCCTGGCCTCAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2363864 30 + 4274983 ATGCCACCTAAGC--C--ACTGGCCTGGCCTCAC i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3982211 25 - 30143674 ATGGCCCCTAAGC--C--ACTGGCCTG-----GC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 596798 30 + 2501019 ATGCCACCTAAGC--T--ACTGGCCGGGCCTCGC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5507527 30 + 5549422 ATGCCATCTACAC--T--ACTGGCCTGGCCTGGC i otoGar3.GL873654 I 206 C 0 s mm10.chr7 111123056 30 - 145441459 ATGCTGCCTGAGC--T--ATTGCCTTGGCCTGGT i mm10.chr7 C 0 C 0 s canFam3.chr1 4638500 30 - 122678785 --TCCGCTCCAGCGAG--ACTAGACTGGCCTCGC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 373260 32 + 643850 ACACTGCCTAAGC--TAGACAGGACTGGCCTCGC i dasNov3.JH563638 C 0 C 0 e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=163986.000000 s hg38.chr19_GL383574v1_alt 100708 20 + 155864 CCCAGA--CTC--TCTATAACCAG s panTro5.chr19 36168662 20 + 61309027 CCCAGA--CTC--TCTATACCCAG i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63921665 20 - 106955855 CCCAGA--CTC--TCCATACCCAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30236510 20 + 53671032 CTCAGA--CTC--TCCATACCCAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34690359 20 + 59248254 CTCAGA--CTC--TCCATACCCAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4558772 20 - 13342542 CCCAGA--CTC--TCCATACCCAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5485889 20 + 7714307 CCCAGA--CTC--TCCATACCCAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291733 20 + 50890351 CCCAGA--CTC--TCCATACCCAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920758 20 - 2385121 CCCAGA--CTC--TCCATACCCAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2363894 20 + 4274983 CCTAGA--CTC--TCCATACCCAG i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3982236 20 - 30143674 CCCAGC--CTC--TCCATACCCAG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 596828 20 + 2501019 CCCAGC--CTC--TCCATACCCAG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5507557 20 + 5549422 CCCAGC--CTC--TCCATATCCAG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111123086 22 - 145441459 CCCAAC--CTCCATCCATACTCAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4638530 21 - 122678785 -CCGGC--CTCTCTCCATGCCCAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 373292 22 + 643850 CCCAGCTTCTC--TCCTGACTGAG i dasNov3.JH563638 C 0 C 0 e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39910903 1558 + 64411610 I a score=169624.000000 s hg38.chr19_GL383574v1_alt 100728 16 + 155864 CAGATGCAGCCAGTTG s panTro5.chr19 36168682 16 + 61309027 CAGATGCAGCCAGTTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912461 16 + 64411610 CAGATGCAGCCAGTTG i panPan2.chr19 I 1558 C 0 s nomLeu3.chr10 63921685 16 - 106955855 CAGATGCAGCCAGTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30236530 16 + 53671032 CAGATGCAGCCAGTTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34690379 16 + 59248254 CAGATGCAGCCAGTTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4558792 16 - 13342542 CAGATGCAGCCAGTTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5485909 16 + 7714307 CAGATGCAGCCAGTTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291753 16 + 50890351 CAGATGCTGTCAGTTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920778 16 - 2385121 CAGATGCAGCCAGTTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2363914 16 + 4274983 CAGATGCAGCCAGTTG i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3982256 16 - 30143674 CAGATGCAACCAGTTG i micMur3.chr22 C 0 I 297 s proCoq1.NW_012149263v1 596848 15 + 2501019 CAGATGCAACCAGTT- i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5507577 16 + 5549422 CAGATGCAGCCAGTCA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111123108 16 - 145441459 CAGATGCAGCCAGTTG i mm10.chr7 C 0 C 0 s canFam3.chr1 4638551 14 - 122678785 CAGA--CAGCCAGTTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 373314 16 + 643850 CAAACTCAGCCAGTTG i dasNov3.JH563638 C 0 C 0 e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=789552.000000 s hg38.chr19_GL383574v1_alt 100744 96 + 155864 GCTCTGTGCCCAAAATGTCTAGCCAGCCCTCTTCAGAC----------------------C-TGGAATGCAGCTACCCTTCCTGGGGCTCACCGCCCATCTCACAGC-TTTCACATCCTG s panTro5.chr19 36168698 95 + 61309027 -CTCTGTGCCCAAAATGTCTAGCCAGCCCTCTTCAGAC----------------------C-TGGAATGCAGCTACCCTTCCTGGGGCTCACCGCCCATCTCACAGC-TTTCACATCCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912477 95 + 64411610 -CTCTGTGCCCAAAATGTCTAGCCAGCCCTCTTCAGAC----------------------C-TGGAATGCAGCTACCCTTCCTGGGGCTCACCGCCCATCTCACAGC-TTTCACATCCTG i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921701 117 - 106955855 -CTCTGTGCCCAAAATGTCTAGCCAGCCCTCTTCAGACCTGTTCCCAAATCCTGCAGACTC-TGGAATGCAGCTACCCTTCCTGGGGCTCACCACCCGTCTCACAGC-TTTCACATCCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30236546 117 + 53671032 -CTCTGTGCCCAAAATATCTAGCCAGCTCTCTCCAGACTTGTTCCCAAACCCTGCGGACTC-CGGAATGCAGCTACCTTTCCTGGGGTTCACCGCCCATCTCACAGC-TTTCACATCCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34690395 117 + 59248254 -CTCTGTGCCCAAAATATCTAGCCAGCCCTCTCCAGACTTGTTCCCAAATCCTGCGGACTC-CGGAATGCAGCTACCTTTCCTGGGGTTCACCGCCCATCTCACAGC-TTTCACATCCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4558808 117 - 13342542 -CTCTGTGCCCAAAATATCTAGCCAGCCCTCTCCAGACTTGTTCCCAAATCCTGCGGACTC-TGGAATGCAGCTACCTTTCCTGGGGTTCACCGCCCATCTCACAGC-TTTCACATCCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5485925 117 + 7714307 -CTCCGTGCTCAAAATATCTAGCCAGCCCTCTCCAGACCTGTTCCCAAATCCTGCGGACTC-CGGAATGCGGCTACCCTTCCTGGGGCTCACCGCCCATCTCACAGC-TTTCACATCCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291769 117 + 50890351 -CTCTGTGCCCAAAATATCTAGCCAGCCCTCTCCAGACCTGTTCCCAAATCCTGCAGACTC-CGGAATGCAGCTACCCTTCCTGGGGCTTACCACCCATCTCACAGT-TTTCACATCCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920794 117 - 2385121 -CTCTGTGCCCAAAATATCTAGCCAGCCCTCTCCAGACCTGTTCCCAAATCCTGCGGACTC-CGGAATGCGGCTACCCTTCCTGGGGTTCACCGCCCATCTCACAGC-TTTCACATCCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2363930 117 + 4274983 -CTCTGTGCCCAAAATATCTAGCCAGCCCTCTCCAGACCTGTTCCCAAATCCTGCAGACTC-CGGAATGCAGCTACCCTTCCTGGGGTTCACCGCCCATCTCACAGC-TTTCACATCCTG i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 596863 118 + 2501019 GCTCCGTGCCCAGAATGTCTGACCAGCCCCCTCCAGACCTGCTCCCAAATCCTGTGGACTC-CGGGATGCAGCGACCCTTCCCGGGGCTCGCGGCCCATCTTGCAGC-TTTCACAGCCTG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5507593 89 + 5549422 -CTCCATGCCCAGAATGTCTGACCAGCCCTCCACAGACCTGCTCCCAAATTCTGTGGACT---------CAGC--------------------ACCTATTTTGCAGC-TTTTACATCCTT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111123124 53 - 145441459 -CTCTGTGCCCAGAATGTCTGGCCGGCTCCCTCCAGACCAGCTCCCAAATCCTG------------------------------------------------------------------ i mm10.chr7 C 0 I 105 s canFam3.chr1 4638565 109 - 122678785 -CTCCGTGTCCAGAACGTCTGGCCAGCCCTCTCCAGAC----TCGGCAATCCTGGGGATTC-TGGAACGCAGCTACCCTTCCTGGGGCTCATGG-----TTTGCAGCAGTTCACACTCTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 373330 117 + 643850 -TTCTGTGCCCAGAATGTCTGGCCAGCCCTCTCCAGACTCACTCCCAAGTCCTGCTGACTCTTGGAATGCAGCCACCTTTCCTGGAGCTCACAG-GCATCTCGCAGC-TTTCCCATCCTG i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3982272 297 - 30143674 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=181723.000000 s hg38.chr19_GL383574v1_alt 100840 26 + 155864 CCC----------------GAGGGAGACCAGGAAGGTAAAAT s panTro5.chr19 36168793 26 + 61309027 CCC----------------GAGGGAGACCAGGAAGGTAAAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912572 26 + 64411610 CCC----------------GAGGGAGACCAGGAAGGTAAAAT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921818 26 - 106955855 CCC----------------AAGGGAGACCAGGAAGGTAAAAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30236663 26 + 53671032 CCC----------------AAGGGAGACCAGGAAGGTAAAGT i rheMac8.chr19 C 0 I 318 s macFas5.chr19 34690512 26 + 59248254 CCC----------------AAGGGAGACCAGGAAGGTAAAGT i macFas5.chr19 C 0 I 317 s macNem1.NW_012011689v1 4558925 26 - 13342542 CCC----------------AAGGGAGACCAGGAAGGTAAAGT i macNem1.NW_012011689v1 C 0 I 311 s cerAty1.NW_012005268v1 5486042 26 + 7714307 CCC----------------AAGGGAGACCAGGAAGGTAAAGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291886 26 + 50890351 CCC----------------AAGGGAGACCAGGAAGGTAAAGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920911 26 - 2385121 CCC----------------AAGGGAGACCAGGAAGGTAAAGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364047 26 + 4274983 CCC----------------AAGGGAGACCAGGAAGGTAAAGT i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 596981 26 + 2501019 CCC----------------AAAGGAGACCAATAAGGTAAAGT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5507682 26 + 5549422 CCT----------------AAAGGAGATCAATAAAGTAAAGT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4638674 42 - 122678785 CCCTGGGTCGGGGGGGGGGGGGGGTGACTGGCGAGGTAGAGG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 373447 20 + 643850 CCC----------------AAGGCAGACCAGTAAGG------ i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3982272 297 - 30143674 I e mm10.chr7 111123177 105 - 145441459 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e saiBol1.JH378197 5428092 2404 + 8899380 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=104028.000000 s hg38.chr19_GL383574v1_alt 100866 13 + 155864 AGAAAAGTTACTC s panTro5.chr19 36168819 13 + 61309027 AGAAAAGTTACTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912598 13 + 64411610 AGAAAAGTTACTC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921844 13 - 106955855 AGAAAAGTTACTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237007 13 + 53671032 agaaaaGTTACTC i rheMac8.chr19 I 318 C 0 s macFas5.chr19 34690855 13 + 59248254 agaaaaGTTACTC i macFas5.chr19 I 317 C 0 s macNem1.NW_012011689v1 4559262 13 - 13342542 agaaaaGTTACTC i macNem1.NW_012011689v1 I 311 C 0 s cerAty1.NW_012005268v1 5486068 13 + 7714307 AGAAAAGTTACTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291912 13 + 50890351 AGAAAAGTTACCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920937 13 - 2385121 AGAAAAGTTACTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364073 13 + 4274983 AGAAAAGTTACTC i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 3467823 13 - 8899380 AGAGAAGTCACTC i saiBol1.JH378197 n 2404 C 0 s proCoq1.NW_012149263v1 597007 13 + 2501019 GGAAAAGTTACTC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5507708 13 + 5549422 AGCGAAGTTATTC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4638716 13 - 122678785 AGGAAAAGCACTC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 373467 5 + 643850 ---AAAGT----- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3982272 297 - 30143674 I e mm10.chr7 111123177 105 - 145441459 I e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=8281.000000 s hg38.chr19_GL383574v1_alt 100879 1 + 155864 T s panTro5.chr19 36168832 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912611 1 + 64411610 T i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921857 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237020 1 + 53671032 T i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34690868 1 + 59248254 T i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559275 1 - 13342542 T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486081 1 + 7714307 T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291925 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920950 1 - 2385121 T i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364086 1 + 4274983 T i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 3467836 1 - 8899380 T i saiBol1.JH378197 C 0 C 0 s proCoq1.NW_012149263v1 597020 1 + 2501019 T i proCoq1.NW_012149263v1 C 0 I 30 s otoGar3.GL873654 5507721 1 + 5549422 T i otoGar3.GL873654 C 0 I 52 e micMur3.chr22 3982272 297 - 30143674 I e dasNov3.JH563638 373472 0 + 643850 C e mm10.chr7 111123177 105 - 145441459 I e canFam3.chr1 4638729 0 - 122678785 C e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=79858.000000 s hg38.chr19_GL383574v1_alt 100880 14 + 155864 Tggccaggtaaggt s panTro5.chr19 36168833 14 + 61309027 Tggccaggtaaggt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912612 14 + 64411610 Tggccaggtaaggt i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921858 14 - 106955855 Tggccaggtaaggt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237021 14 + 53671032 Tggccaggtaaggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34690869 14 + 59248254 Tggccaggtaaggt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559276 14 - 13342542 Tggccaggtaaggt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486082 14 + 7714307 Tggccaggtaaggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291926 14 + 50890351 Tggccgggtaaggt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920951 14 - 2385121 Tggccaggtaaggt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364087 14 + 4274983 Tggccgggtaaggt i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 3467837 14 - 8899380 CAGTGggatgtggt i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5507774 14 + 5549422 Tggcctggcgcagt i otoGar3.GL873654 I 52 C 0 e proCoq1.NW_012149263v1 597021 30 + 2501019 I e micMur3.chr22 3982272 297 - 30143674 I e dasNov3.JH563638 373472 0 + 643850 C e mm10.chr7 111123177 105 - 145441459 I e canFam3.chr1 4638729 0 - 122678785 C e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e calJac3.chr22 28585960 169 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=138460.000000 s hg38.chr19_GL383574v1_alt 100894 20 + 155864 ggctcacatctgtaatcttg s panTro5.chr19 36168847 20 + 61309027 ggctcacatctgtaatcttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912626 20 + 64411610 ggctcacatctgtaatcttg i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921872 20 - 106955855 ggctcacatctgtaatctcg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237035 20 + 53671032 ggctcacacctgtaatctca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34690883 20 + 59248254 ggctcacacctgtaatctca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559290 20 - 13342542 ggctcacacctgtaatctca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486096 20 + 7714307 ggctcacacctgtaatctca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291940 20 + 50890351 ggctcacacctgtaatctca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920965 20 - 2385121 ggctcacacctgtaatctca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364101 20 + 4274983 ggctcacacctgtaatctca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586129 20 + 49145316 ggatcacacctgtaatccca i calJac3.chr22 I 169 C 0 s saiBol1.JH378197 3467851 20 - 8899380 ggcttacacttgtaattcca i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5507788 20 + 5549422 ggctcaagtctggaatcctc i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 373472 13 + 643850 -------ATCTACAGACTTA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 597021 30 + 2501019 I e micMur3.chr22 3982272 297 - 30143674 I e mm10.chr7 111123177 105 - 145441459 I e canFam3.chr1 4638729 0 - 122678785 C e aotNan1.NW_018505377v1 386180 549 - 4471408 I e cebCap1.NW_016107633v1 1638772 568 - 2680843 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=27200.000000 s hg38.chr19_GL383574v1_alt 100914 2 + 155864 gc s panTro5.chr19 36168867 2 + 61309027 gc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912646 2 + 64411610 gc i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921892 2 - 106955855 gc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237055 2 + 53671032 gc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34690903 2 + 59248254 gc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559310 2 - 13342542 gc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486116 2 + 7714307 gc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291960 2 + 50890351 gc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920985 2 - 2385121 gc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364121 2 + 4274983 gc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586149 2 + 49145316 gc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 3467871 2 - 8899380 gc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1039290 2 + 2680843 gc i cebCap1.NW_016107633v1 n 568 C 0 s aotNan1.NW_018505377v1 4082822 2 + 4471408 gc i aotNan1.NW_018505377v1 n 549 C 0 s otoGar3.GL873654 5507808 2 + 5549422 gc i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 373485 2 + 643850 GC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 597021 30 + 2501019 I e micMur3.chr22 3982272 297 - 30143674 I e mm10.chr7 111123177 105 - 145441459 I e canFam3.chr1 4638729 0 - 122678785 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=999034.000000 s hg38.chr19_GL383574v1_alt 100916 118 + 155864 actttgggaggctgaggtgggaggatcacctgaggctaggagttgaagaccaacctgggcaacaaagtgagactccatctctacaaaaagtttcaaaaattagctagtcatggtggca s panTro5.chr19 36168869 118 + 61309027 actttgggaggctgaggtgggaggatcacctgaggctaggagttgaagaccaacctgggcaacaaagtgagactccatctctacaaaaagtttcaaaaattagctagtcatggtggca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912648 118 + 64411610 actttgggaggctgaggtgggaggatcacctgaggctaggagttgaagaccaacctgggcaacaaagtgagactccatctctacaaaaagtttcaaaaattagctagtcatggtggca i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63921894 118 - 106955855 actttgggaggctgaggtgggaggatcacctgaggctaggagttgaagaccaacctgggcaacaaagtgagactccatctctataaaaagtttcaaaaattagctagtcatggtggca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237057 118 + 53671032 acattgggaagctaaggtgggaggatcgcctgaggctaggagttgaagaccaacctgggcaacaaagtgagactccatctctacaaaacatttcaaaaattatctagtcatggtggca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34690905 118 + 59248254 acattgggaagctaaggtgggaggatcgcctgaggctaggagttgaagaccaacctgggcaacaaagtgagactccatctctacaaaacatttcaaaaattagctagtcatggtggca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559312 118 - 13342542 acattgggaagctaaggtgggaggatcgcctgaggctaggagttgaagaccaacctgggcaacaaagtgagactccatctctacaaaacatttcaaaaattagctagtcatggtggca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486118 118 + 7714307 acattgggaagctaaggtgggaggatcgcctgaggctaggagttgaagaccaacctgggcaacaaagtgagactccatctctacaaaacatttcaaaaattagctagtcatggtggca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29291962 118 + 50890351 atgttgggaagctaaggtgggaggatcgcctgagggtaggagttgaagaccaacctgggcaacaaagtgagaatccatctctacaaaacatttcaaaaattagctaatcatggtggca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 920987 118 - 2385121 acattgggaagctaaggtgagaggatcgcctgaggctaggagttgaagaccaacctgggcaacaaagtgagactccatctctacaaaacatttcaaaaattagctagtcatggtggca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364123 118 + 4274983 actttgggaagctaaggtgggaggatcacctgaggctaggagttgaagaccaacctgggcaacaaagtgagactccatctctacaaaacatttcaaaaattagctagtcatggtggcc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586151 116 + 49145316 actttgggaggccgaggcgggcagatcac--gaggtcaggagatcaaaaccatcctagccagcacggtgaaaacccatctctactaaaaatacaaaaaattagccgggtgtgttggca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 3467873 118 - 8899380 attttgggaggctaagttgggagggtcacttgaggctaggagttgaagaccaacctgagcaacaaagtgggactccatctctacaaaaaatctgaaaaattagttgggcatagtggtg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1039292 118 + 2680843 attttgggaggctgagttgggagggtcacttgaggctaggagttgaagaccaacctgagcaacaaagtgggactccatctcaacaaaaaatctgaaaaattagctgggcatagtggtg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 4082824 117 + 4471408 attttgggaggctgagttgggagggtcacttgaggctaggagttgaagaccaacctaagcaacaaagtgggactccatctctacaaaaagtttgaaaaattagctgggcatag-ggtg i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5507810 103 + 5549422 actcagggaggccaaaacaggtggattgtttgagctcacacgttcaagaccagcctgagc--cggatcgagatctcatttct-------------aaaaatagtcaggtgttgtggcc i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 597021 30 + 2501019 I e micMur3.chr22 3982272 297 - 30143674 I e dasNov3.JH563638 373487 0 + 643850 C e mm10.chr7 111123177 105 - 145441459 I e canFam3.chr1 4638729 0 - 122678785 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=1066405.000000 s hg38.chr19_GL383574v1_alt 101034 133 + 155864 cccacttgtagtcccagttactggggaggctgaggcaggaggattgcttgagcccagcagttcaaggctgctgtgagctatgattgtgccactgcactcctact-ggacaacagagt-gagacc-ctgtcgta-aaa s panTro5.chr19 36168987 133 + 61309027 cccacttgtagtcccagttactggggaggctgaggcaggaggattgcttgagcccagcagttcaaggctgctgtgagctatgattgtgccactgcactcctact-ggacaacagagt-gagacc-ctgtcgtt-aaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912766 133 + 64411610 cccacttgtagtcccagttactggggaggctgaggcaggaggattgcttgagcccagcagttcaaggctgctgtgagctatgattgtgccactgcactcctact-ggacaacagagt-gagacc-ctgtcgtt-aaa i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922012 133 - 106955855 cccatttgtagtcccagttactggggaggctgaggcaggaggattgcttgagcccagcagttcaaggctgctgtgagctatgattgtgccactgcactcctact-ggacaacagggt-gagacc-ctgtcgtt-taa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237175 133 + 53671032 cccacttgtagtcccagttactggggaggctgagacaggaggattgcttgagcccagcagttcaaggctactgtgagctatgattgtgccactgcgctcctgct-ggacaacacaat-gagacc-ctgtcttt-tta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34691023 133 + 59248254 cccacttgtagtcccagttactggggaggctgagacaggaggattgcttgagcccagcagttcaaggctactgtgagctatgattgtgccactgcactcctgct-ggacaacacaat-gagacc-ctgtcttt-taa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559430 132 - 13342542 cccacttgtagtcccagttactggggaggctgagacaggaggattgcttgagcccagcagttcaaggctactgtgagctatgattgtgccactgcactcctgct-ggacaacacaat-gagacc-ctgtc-tt-taa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486236 132 + 7714307 cccacttgtagtcccagttactggggaggctgagacaggaggattgcttgagcccagcagttcaaggctactgtgagctatgattgtgccgctgcactcctgct-ggaaaacacaat-gagatc-ctgtc-tt-taa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292080 133 + 50890351 cccacttgtagtcccagttactggggaggctgagacaggaggattgcttgagcccagcagttcaaggctactgtgagctacgattgtgccactgcactcctgct-ggacaacagaat-gagacc-ctgtcttt-aaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921105 134 - 2385121 cccacttgtagtcccagttactggggaggctgagacaggaggattgcttgagcccagcagttcaaggctactgtgagctatgattgtgccactgcactcctgct-ggacaacacaat-gagacc-ctgtctttaaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364241 130 + 4274983 cccacttgtagtcccagttactggggaggctgagacaggaggattgcttgagcccagcagttcaaggctactgtgagctatgattgtgccactgtactcctgct-ggacaacagaat-gagact-ctgtc----tta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586267 132 + 49145316 agcgcctgtagtccctgctactaaggaggctgaggca-gagaattgcttgaactcgggagacggagggtgcagtgagccaagatcgcgctactgcacttcagcc-tgatgacagagt-gagact-ctgtttcc-aaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 3467991 133 - 8899380 cccacttgtagtcccagttactggggaggttgaggtaggaggatcacttgagcccacaagttcaagactgcagtgagatacgattgtgccactgcactcctgct-gggcaacagagt-aaaacc-ctgtctga-aaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1039410 133 + 2680843 cccacttgtagtcccagttactggggaggctgaggtaggaggatcacttgagcctacaagttcaagactgcagtgagatatgattgtgccactgcactcctgct-gggcaacagagt-aaaacc-ctgtctca-aaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 4082941 134 + 4471408 cccacttaaagtcccagttactggggagggtgaggtaggaggatcacttgagcctacaagttcaagactgcagtgagatatgattgtgccactgcactcctgct-gggcaacagagtaaaaacc-ttgtttca-aaa i aotNan1.NW_018505377v1 C 0 n 0 s otoGar3.GL873654 5507913 135 + 5549422 ggcgcctgtagtctcagctacttgggaggctgagccaagagaattgcttgagcccaagagtttgaggttgctgtgaactatggtgatgccatggcattctacccagggtgacagagt-gagacctctgtctcc-aaa i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 373487 20 + 643850 CCCAT---------------------------------------------------------------------------------TGCCTCCGTACCCCC------------------------------------ i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 597021 30 + 2501019 I e micMur3.chr22 3982272 297 - 30143674 I e mm10.chr7 111123177 105 - 145441459 I e canFam3.chr1 4638729 0 - 122678785 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=16848.000000 s hg38.chr19_GL383574v1_alt 101167 2 + 155864 aa s panTro5.chr19 36169120 2 + 61309027 aa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912899 2 + 64411610 aa i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922145 2 - 106955855 aa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237308 2 + 53671032 aa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34691156 2 + 59248254 aa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559562 2 - 13342542 aa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486368 2 + 7714307 aa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292213 2 + 50890351 aa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921239 2 - 2385121 aa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364371 2 + 4274983 aa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586399 1 + 49145316 -a i calJac3.chr22 C 0 I 2 s saiBol1.JH378197 3468124 1 - 8899380 -a i saiBol1.JH378197 C 0 I 3 s cebCap1.NW_016107633v1 1039543 1 + 2680843 -a i cebCap1.NW_016107633v1 C 0 n 0 s aotNan1.NW_018505377v1 386729 2 - 4471408 aa i aotNan1.NW_018505377v1 I 549 I 3 s otoGar3.GL873654 5508048 2 + 5549422 aa i otoGar3.GL873654 C 0 I 1 e proCoq1.NW_012149263v1 597021 30 + 2501019 I e micMur3.chr22 3982272 297 - 30143674 I e dasNov3.JH563638 373507 0 + 643850 C e mm10.chr7 111123177 105 - 145441459 I e canFam3.chr1 4638729 0 - 122678785 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=82624.000000 s hg38.chr19_GL383574v1_alt 101169 12 + 155864 aaaaaaaaaaaa s panTro5.chr19 36169122 12 + 61309027 aaaaaaaaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912901 10 + 64411610 aaaaaaaaaa-- i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922147 12 - 106955855 aaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237310 11 + 53671032 aaaaaaaaaaa- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34691158 11 + 59248254 aaaaaaaaaaa- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559564 11 - 13342542 aaaaaaaaaaa- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486370 11 + 7714307 aaaaaaaaaaa- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292215 11 + 50890351 aaaaaaaaaaa- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921241 11 - 2385121 aaaaaaaaaaa- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364373 11 + 4274983 aaaaaaaaaaa- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586402 10 + 49145316 -aaaaaaaaaa- i calJac3.chr22 I 2 C 0 s saiBol1.JH378197 3468128 11 - 8899380 caacaacaaaa- i saiBol1.JH378197 I 3 C 0 s cebCap1.NW_016107633v1 1639340 11 - 2680843 aaaaaaaaaaa- i cebCap1.NW_016107633v1 I 568 C 0 s aotNan1.NW_018505377v1 386734 11 - 4471408 aaaaaaaaaaa- i aotNan1.NW_018505377v1 I 3 C 0 s otoGar3.GL873654 5508051 11 + 5549422 aaagagaaaaa- i otoGar3.GL873654 I 1 C 0 e proCoq1.NW_012149263v1 597021 30 + 2501019 I e micMur3.chr22 3982272 297 - 30143674 I e dasNov3.JH563638 373507 0 + 643850 C e mm10.chr7 111123177 105 - 145441459 I e canFam3.chr1 4638729 0 - 122678785 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=10616.000000 s hg38.chr19_GL383574v1_alt 101181 9 + 155864 a-----aGTGACTG s panTro5.chr19 36169134 8 + 61309027 a------GTGACTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912911 7 + 64411610 -------GTGACTG i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922159 14 - 106955855 aaaaaaaGTGACTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237321 5 + 53671032 -------GTGAC-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34691169 5 + 59248254 -------GTGAC-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559575 5 - 13342542 -------aTGAC-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486381 5 + 7714307 -------GTGAC-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292226 5 + 50890351 -------GTGAC-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921252 5 - 2385121 -------GTGAC-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364384 5 + 4274983 -------GTGAC-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586412 5 + 49145316 -------GTTAC-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 3468139 5 - 8899380 -------GTTAC-- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1639351 5 - 2680843 -------GTTAC-- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 386745 5 - 4471408 -------GTTAC-- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 597021 30 + 2501019 I e micMur3.chr22 3982272 297 - 30143674 I e dasNov3.JH563638 373507 0 + 643850 C e otoGar3.GL873654 5508062 0 + 5549422 C e mm10.chr7 111123177 105 - 145441459 I e canFam3.chr1 4638729 0 - 122678785 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=79600.000000 s hg38.chr19_GL383574v1_alt 101190 9 + 155864 TCT--GCAAAC s panTro5.chr19 36169142 9 + 61309027 TCT--GCAAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912918 9 + 64411610 TCT--GCAAAC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922173 9 - 106955855 TCT--GCAAAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237326 9 + 53671032 TCT--GCAAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34691174 9 + 59248254 TCT--GCAAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559580 9 - 13342542 TCT--GCAAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486386 9 + 7714307 TCT--GCAAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292231 9 + 50890351 TCT--GCAAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921257 9 - 2385121 TCT--GCAAAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364389 9 + 4274983 TCT--GCAAAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586417 11 + 49145316 TCTCTGCAAAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 3468144 11 - 8899380 TCTCAGCAAAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1639356 11 - 2680843 TCTCTGCAAAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 386750 9 - 4471408 TCT--GCAAAC i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4638729 9 - 122678785 TCT--CCAGAC i canFam3.chr1 C 0 I 1 e proCoq1.NW_012149263v1 597021 30 + 2501019 I e micMur3.chr22 3982272 297 - 30143674 I e dasNov3.JH563638 373507 0 + 643850 C e otoGar3.GL873654 5508062 0 + 5549422 C e mm10.chr7 111123177 105 - 145441459 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=330688.000000 s hg38.chr19_GL383574v1_alt 101199 33 + 155864 AACCCCATTACCCC--------CTC-CACCACCAAGAGCACT s panTro5.chr19 36169151 33 + 61309027 AACCCCATTACCCC--------CTC-CACCACCAAGAGCACT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912927 33 + 64411610 AACCCCATTACCCC--------CTC-CACCACCAAGAGCACT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922182 33 - 106955855 AACCCCATTGCCCC--------CTC-CACCACCAAGAGCACT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237335 33 + 53671032 AACCCCAGTGCCCC--------CTC-CACCACCAAGAGCACT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34691183 33 + 59248254 AACCCCAGTGCCCC--------CTC-CACCACCAAGAGCACT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559589 33 - 13342542 AACCCCAGTACCCC--------CTC-CACCACCAAGAGCACT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486395 33 + 7714307 AACCCCAGTGCCCC--------CTC-CACCACCAAGAGCACT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292240 33 + 50890351 CACCCCATTGCTCC--------CTC-CACCACGAAGAGCACC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921266 33 - 2385121 AACCCCAGTACCCC--------CTC-CACCACCAAGAGCACT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364398 33 + 4274983 AACCCCATTGCCCC--------CTC-CACCACCAAGAGCACT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586428 33 + 49145316 AACCCCATTGCTCC--------CTC-CACCACCAAGAACACT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 3468155 33 - 8899380 AACCCCAATGCCCC--------CTC-CACCACCAAGAACACT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1639367 33 - 2680843 AACCCCATTGCTCC--------CTC-CACCACCAGGAACACT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 386759 33 - 4471408 AACCCCATTGCTCC--------CTC-CACCACCAAGAACACT i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111123282 34 - 145441459 CACTCCACTGCTCC--------CCAGCCCCACCAAGAAGACT i mm10.chr7 I 105 C 0 s canFam3.chr1 4638739 33 - 122678785 AACCCCACTGCCCCTGCCTTGTCCC-CCCAACCT-------- i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 373507 31 + 643850 --Taccaccaccac--------cac-caccaccaTGAAAATT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 597021 30 + 2501019 I e micMur3.chr22 3982272 297 - 30143674 I e otoGar3.GL873654 5508062 0 + 5549422 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=355515.000000 s hg38.chr19_GL383574v1_alt 101232 29 + 155864 TGGCTGTGAAAACCCCTTTCCTGAAGG-------------CT s panTro5.chr19 36169184 29 + 61309027 TGGCTGTGAAAACCCCTTTCCTGAAGG-------------CT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912960 29 + 64411610 TGGCTGTGAAAACCCCTTTCCTGAAGG-------------CT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922215 34 - 106955855 TGGCTGTGAAAACCCCTTTCTTGAAGGCTTT--------TCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237368 34 + 53671032 TGGCTGTGAAAACCCCTTTCCTGAAGGCTCT--------TCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34691216 34 + 59248254 TGGCTGTGAAAACCCCTTTCCTGAAGGCTCT--------TCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559622 34 - 13342542 TGGCTGTGAAAACCCCTTTCCTGAAGGCTCT--------TCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486428 34 + 7714307 TGGCTGTGAAAACCCCTTTCCTGAAGGCTCT--------TCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292273 34 + 50890351 TGGCTGTGAAAACCCCTTTCCTGAAGGCTCT--------TCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921299 34 - 2385121 TGGCTGTGAAAACCCCTTTCCTGAAGGCTCT--------TCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364431 34 + 4274983 CGGCTGTGAAAACCCCTTTCCTGAAGGCTCT--------TCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586461 34 + 49145316 TGGCTGTGAAAACCTCTTTTTTGAAGGCTCT--------TCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 3468188 34 - 8899380 TGGCTATGAAAACCCCTTTCCTGAAGGTTCT--------TCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1639400 42 - 2680843 TGGCTGTGAAAACCTCTTTTCTGAAGGCTCTTCTTTCAGTCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 386792 34 - 4471408 TGGCTGTGAAAACCTCTTTTCTGAAGGCTCT--------TCT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 597051 29 + 2501019 TGGCTGTGAAAACCCCTTCCCCGAAGGCT------------- i proCoq1.NW_012149263v1 I 30 I 15 s mm10.chr7 111123316 34 - 145441459 TGGCTGTGAAAACTCCTTCCCTGAAGGTTTT--------TCT i mm10.chr7 C 0 C 0 s canFam3.chr1 4638772 34 - 122678785 TGGCTGTGACAACCTCTCCCCCGAAGGCTCT--------TCT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 373538 29 + 643850 AGGCTGAGTAAAACCCTCCCTCAAAGGCT------------- i dasNov3.JH563638 C 0 I 5 e micMur3.chr22 3982272 297 - 30143674 I e otoGar3.GL873654 5508062 0 + 5549422 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=105742.000000 s hg38.chr19_GL383574v1_alt 101261 11 + 155864 TTAAGATATTC s panTro5.chr19 36169213 11 + 61309027 TTAAGATATTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39912989 11 + 64411610 TTAAGATATTC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922249 11 - 106955855 TTAAAATATTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237402 11 + 53671032 TTCTGATATTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34691250 11 + 59248254 TTCTGATATTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559656 11 - 13342542 TTCTGATATTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486462 11 + 7714307 TTCTGATATTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292307 11 + 50890351 TTCTGATATTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921333 11 - 2385121 TTCTGATATTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364465 11 + 4274983 TTCAGATATTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586495 11 + 49145316 TTCAGACATTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 3468222 11 - 8899380 TTTAGACATTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1639442 11 - 2680843 TTCAGACATTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 386826 11 - 4471408 TTCAGACATTT i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111123350 11 - 145441459 TTCAGATGTTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4638806 11 - 122678785 TTCAGACATGC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 373572 11 + 643850 TTCAGACATTC i dasNov3.JH563638 I 5 C 0 e proCoq1.NW_012149263v1 597080 15 + 2501019 I e micMur3.chr22 3982272 297 - 30143674 I e otoGar3.GL873654 5508062 0 + 5549422 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=660550.000000 s hg38.chr19_GL383574v1_alt 101272 61 + 155864 CCACTGAAACTAACATGT-AAAACCCAGCCTAGAAGCCCTGACTTTTATTTCCATAAAGAAT s panTro5.chr19 36169224 61 + 61309027 CCACTGAAACTAACATGT-AAAACCCAGCCTAGAAGCCCTGACTTTTATTTCCATAAAGAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913000 61 + 64411610 CCACTGAAACTAACATGT-AAAACCCAGCCTAGAAGCCCTGACTTTTATTTCCATAAAGAAT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922260 61 - 106955855 CCACTGAAACTAACATGT-AAAGCCCAGCCTAGAAGCCCTGACTTTTATTTCCATAAAGAAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237413 61 + 53671032 CCACTGAAACTAACATGT-AAAGCCCAGCCTAGAAGCCCTGACTTTTATTTCCATAAGGAAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34691261 61 + 59248254 CCACTGAAACTAACATGT-AAAGCCCAGCCTAGAAGCCCTGACTTTTATTTCCATAAGGAAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559667 61 - 13342542 CCACTGAAACTAACATGT-AAAGCCCAGCCTAGAAGCCCTGACTTTTATTTCCATAAGGAAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486473 61 + 7714307 CCACTGAAACTAACATGT-AAAACCCAGCCTAGAAGCCCTGACTTTTATTTCCATAAGGAAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292318 61 + 50890351 CCACTGAAACTAACATGT-AAAGCCCATCCTAGAAGCCCTGACTTTTATTTCCATAAGGAAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921344 61 - 2385121 CCACTGAAACTAACATGT-AAAGCCCAGCCTAGAAGCCCTGACTTTTATTTCCATAAGGAAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364476 61 + 4274983 CCACTGAAACTAACATGT-AAAGCCCAGCCTAGAAGCCCTGACTGTTATTTCCATAAGGAAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586506 62 + 49145316 CCACTGAAACTAACATGGAAAAGCCCAGCCTCGAAGTCCTGGCTTTTATTTCCATAAAGAAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 3468233 62 - 8899380 CCACTGAAACTAACATGTAAAAGCCCAGCCTAGAAGCCCTGGCTTATACTGCCATAGAGAAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1639453 62 - 2680843 CCACTGAAACTAATATGGAAAAGCCCAGCCTCGAAGTCCTGGCTTTTATTTCCATAAAGAAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 386837 62 - 4471408 CCACTGAAACTAACATGGAAAAGCCCAGCCTCGAAGTCCTGGCTTTTATTTCCATAAAGAAT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 597095 61 + 2501019 CCACTAAAACTAACATGTGAAAGCCCGGCCTAGAAG-CCTGGCTTTTACTGCCGTGGAGCGT i proCoq1.NW_012149263v1 I 15 C 0 s mm10.chr7 111123361 60 - 145441459 CCACTAAAACTAACATGGAAGAGGCCAGCCTAGAAG-TCTGGCTCCCACTGTCTCGAACAA- i mm10.chr7 C 0 C 0 s canFam3.chr1 4638817 37 - 122678785 CCACTAAACCT---GTGGAAAAGCCCAGCCTGGAAGCCCT---------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 373583 62 + 643850 CCATTAAAACTAAGATGTAAAAGTCCTAGGCGGAAGTGCTGCCATTTACAGCCATGGAGAGT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3982272 297 - 30143674 I e otoGar3.GL873654 5508062 0 + 5549422 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=113715.000000 s hg38.chr19_GL383574v1_alt 101333 8 + 155864 GCACAAGC s panTro5.chr19 36169285 8 + 61309027 GCACAAGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913061 8 + 64411610 GCACAAGC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922321 8 - 106955855 GCACAAGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237474 8 + 53671032 GCACAAGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34691322 8 + 59248254 GCACAAGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559728 8 - 13342542 GCACAAGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486534 8 + 7714307 GCACAAGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292379 8 + 50890351 GCACAAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921405 8 - 2385121 GCACAAGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364537 8 + 4274983 GCACAAGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586568 8 + 49145316 GCACCAGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 3468295 8 - 8899380 GCACAAGC i saiBol1.JH378197 C 0 n 0 s cebCap1.NW_016107633v1 1639515 8 - 2680843 GCACCAGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 386899 8 - 4471408 GCACCAGC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3982569 8 - 30143674 GCACGAGC i micMur3.chr22 I 297 C 0 s proCoq1.NW_012149263v1 597156 8 + 2501019 GCACGAGC i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111123421 7 - 145441459 GCACAGC- i mm10.chr7 C 0 C 0 s canFam3.chr1 4638854 8 - 122678785 GCACAAGC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 373645 8 + 643850 GCACAAGC i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5508062 0 + 5549422 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=315534.000000 s hg38.chr19_GL383574v1_alt 101341 24 + 155864 CAACAGTAATAACTTTGGCTACCT s panTro5.chr19 36169293 24 + 61309027 CAACAGTAATAACTTTGGCTACCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913069 24 + 64411610 CAACAGTAATAACTTTGGCTACCT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922329 24 - 106955855 CAACAGTAATAACTTTGGCTACTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237482 24 + 53671032 CAACAGTAATAACTTTGGCTACTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34691330 24 + 59248254 CAACAGTAATAACTTTGGCTACTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559736 24 - 13342542 CAACAGTAATAACCTTGGCTACTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486542 24 + 7714307 CAACAGTAATAACTTTGGCTACTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292387 24 + 50890351 CAACAGTAATAACTTTGGCTACTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921413 24 - 2385121 CAACAGTAATAACTTTGGCTACTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364545 24 + 4274983 CAACAGTAATAACTTTGGCTACTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586576 24 + 49145316 CAACAGTAATAACTTTGGCTGCTT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1639523 24 - 2680843 CAACAGTAATAACTTTGGCTGCTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 386907 24 - 4471408 CAACAGTAATAACTTTGGCTGCTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3982577 24 - 30143674 CAACGGTAATAACTCTGGCTGCTT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 597164 24 + 2501019 CAACAGGAATAACTTTTGCTGCTT i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111123428 24 - 145441459 CAACAGTAATAGCCTCAGCCGCTT i mm10.chr7 C 0 C 0 s canFam3.chr1 4638862 22 - 122678785 CAACGGGAGTAAC--TGGCTGCGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 373653 24 + 643850 CAACAGTAACAACCTTTGCTGCTT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5508062 0 + 5549422 C e saiBol1.JH378197 3468303 0 - 8899380 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=21793.000000 s hg38.chr19_GL383574v1_alt 101365 2 + 155864 AA- s panTro5.chr19 36169317 2 + 61309027 AA- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913093 2 + 64411610 AA- i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922353 2 - 106955855 AA- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237506 2 + 53671032 AA- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34691354 2 + 59248254 AA- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559760 2 - 13342542 AA- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486566 2 + 7714307 AA- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292411 2 + 50890351 AA- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921437 2 - 2385121 AA- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364569 2 + 4274983 AA- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586600 2 + 49145316 AA- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5430496 2 + 8899380 aa- i saiBol1.JH378197 I 2404 C 0 s cebCap1.NW_016107633v1 1639547 2 - 2680843 AA- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 386931 2 - 4471408 AA- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3982601 2 - 30143674 AA- i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 597188 2 + 2501019 AA- i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111123452 2 - 145441459 AG- i mm10.chr7 C 0 C 0 s canFam3.chr1 4638884 2 - 122678785 AA- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 373677 2 + 643850 -AT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5508062 0 + 5549422 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=227976.000000 s hg38.chr19_GL383574v1_alt 101367 14 + 155864 GAAAATCAGTTCTG s panTro5.chr19 36169319 14 + 61309027 GAAAATCAGTTCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913095 14 + 64411610 GAAAATCAGTTCTG i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922355 14 - 106955855 GAAAATCAGTTCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237508 14 + 53671032 GAAAATCAGTTCTg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34691356 14 + 59248254 GAAAATCAGTTCTg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4559762 14 - 13342542 GAAAATCAGTTCTg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486568 14 + 7714307 GAAAATCAGTTCTg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292413 14 + 50890351 GAAAATCAGTTCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921439 14 - 2385121 GAAAATCAGTTCTg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364571 14 + 4274983 GAAAATCAGTTCTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586602 14 + 49145316 GAAAATCAATTCtg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5430498 14 + 8899380 gaaaATCAGTTCTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1639549 14 - 2680843 GAAAATCAGCTCTg i cebCap1.NW_016107633v1 C 0 I 1009 s aotNan1.NW_018505377v1 386933 14 - 4471408 GAAAATCAGTTCTg i aotNan1.NW_018505377v1 C 0 I 658 s micMur3.chr22 3982603 14 - 30143674 GAAAATCAGTTCTG i micMur3.chr22 C 0 I 1 s proCoq1.NW_012149263v1 597190 14 + 2501019 GAGAATCGGTTCTG i proCoq1.NW_012149263v1 C 0 I 1 s otoGar3.GL873654 5508062 14 + 5549422 gaaaaTCATTCCTG i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111123454 14 - 145441459 GAAAATCAGCTCTG i mm10.chr7 C 0 C 0 s canFam3.chr1 4638886 14 - 122678785 GGAACCGAGCGCTC i canFam3.chr1 C 0 I 4 s dasNov3.JH563638 373679 14 + 643850 GAAAATCAGTTCTC i dasNov3.JH563638 C 0 C 0 e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=2660.000000 s hg38.chr19_GL383574v1_alt 101381 1 + 155864 -G s panTro5.chr19 36169333 1 + 61309027 -G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913109 1 + 64411610 -G i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922369 1 - 106955855 -G i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237522 1 + 53671032 -g i rheMac8.chr19 C 0 I 401 s macFas5.chr19 34691370 1 + 59248254 -g i macFas5.chr19 C 0 I 288 s macNem1.NW_012011689v1 4559776 1 - 13342542 -g i macNem1.NW_012011689v1 C 0 I 292 s cerAty1.NW_012005268v1 5486582 1 + 7714307 -g i cerAty1.NW_012005268v1 C 0 I 292 s chlSab2.chr6 29292427 1 + 50890351 -G i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921453 1 - 2385121 -g i manLeu1.NW_012102454v1 C 0 I 293 s colAng1.NW_012111697v1 2364585 1 + 4274983 -G i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28586616 1 + 49145316 -g i calJac3.chr22 C 0 I 1008 s saiBol1.JH378197 5430512 1 + 8899380 -G i saiBol1.JH378197 C 0 C 0 s mm10.chr7 111123468 1 - 145441459 -G i mm10.chr7 C 0 C 0 s dasNov3.JH563638 373693 1 + 643850 T- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 597204 1 + 2501019 I e micMur3.chr22 3982617 1 - 30143674 I e otoGar3.GL873654 5508076 1 + 5549422 I e canFam3.chr1 4638900 4 - 122678785 I e aotNan1.NW_018505377v1 386947 658 - 4471408 I e cebCap1.NW_016107633v1 1639563 1009 - 2680843 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=47493.000000 s hg38.chr19_GL383574v1_alt 101382 18 + 155864 AATC-CCCGAGGGGCCCTG- s panTro5.chr19 36169334 18 + 61309027 AATC-CCCGAGGGGCCCTG- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913110 18 + 64411610 AATC-CCCGAGGGGCCCTG- i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922370 18 - 106955855 AATC-CCCGAGGGGCCCTG- i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29292428 18 + 50890351 AATC-CCCGAGGGGCCCTC- i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2364586 18 + 4274983 AATC-CCCGAGGGGCCCTC- i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5430513 17 + 8899380 AATA-CCTGACGGACCTC-- i saiBol1.JH378197 C 0 C 0 s micMur3.chr22 3982618 19 - 30143674 AATCTCTTGGGAGCCCCTC- i micMur3.chr22 I 1 C 0 s proCoq1.NW_012149263v1 597205 19 + 2501019 AGTCCCTTAGGAAGCCCTC- i proCoq1.NW_012149263v1 I 1 C 0 s otoGar3.GL873654 5508077 18 + 5549422 AATC-CTTGGAAACTCCTC- i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111123469 18 - 145441459 AATC-CCGCAGGAGCCCCT- i mm10.chr7 C 0 I 1 s canFam3.chr1 4638904 16 - 122678785 --TC-CTCAGGAGGCCCCC- i canFam3.chr1 I 4 C 0 s dasNov3.JH563638 373694 19 + 643850 AATC-CCTTATGAGCCCCTA i dasNov3.JH563638 C 0 C 0 e aotNan1.NW_018505377v1 386947 658 - 4471408 I e cebCap1.NW_016107633v1 1639563 1009 - 2680843 I e calJac3.chr22 28586617 1008 + 49145316 I e manLeu1.NW_012102454v1 921454 293 - 2385121 I e cerAty1.NW_012005268v1 5486583 292 + 7714307 I e macNem1.NW_012011689v1 4559777 292 - 13342542 I e macFas5.chr19 34691371 288 + 59248254 I e rheMac8.chr19 30237523 401 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=391135.000000 s hg38.chr19_GL383574v1_alt 101400 75 + 155864 TAAGTG------GGATGTTCTGATTCTGCAGCTTTTCTGACAATAGGAATGTGAAGCCCTTAGAAAAGCCAGCCGGAGCAA s panTro5.chr19 36169352 75 + 61309027 TAAGTG------GGATGTTCTGATTCTGCAGCTTTTCTGACAATAGGAATGTGAAGCCCTTAGAAAAGCCAGCCGGAGCAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913128 75 + 64411610 TAAGTG------GGATGTTCTGATTCTGCAGCTTTTCTGACAATAGGAATGTGAAGCCCTTAGAAAAGCCAGCCGGAGCAA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922388 75 - 106955855 TAAGTG------GGATGTTCTGATTCTGCAGCTCTTCTGACAATAGGAATGTGAAGCCCTTAGAAAAGCCAGCCGGGGCAA i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29292446 66 + 50890351 TAAGTG------G--------GATTCTGCAGTTTTTCTGACAATAGTAATGTGAAGCCCTTAGAAAAGCCAG-AGGAGCAA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2364604 74 + 4274983 TAAGTG------GGATGTTCTGATTCTGCAGCTTTTCTGACAATAGTAATGTGAAGCCCTTAGAAAAGCCAG-AGGAGCAA i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5430530 75 + 8899380 TAAGTG------GGATGTTCTCATTCTGCAGCTTCTCTGACAATAGGAATGTGAAGCTGTAAGAAAGGCCAGCTGGAGCAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1640572 75 - 2680843 TAAGTG------GGATGTTCTCATTCTGCAGCTTCTCTGACAATAGGAATGTGAAGCTCTAAGAAAAGCCAGCTGGAGCAA i cebCap1.NW_016107633v1 I 1009 C 0 s aotNan1.NW_018505377v1 387605 75 - 4471408 TAAGTG------GGATGTTCTCATTCTACAGCTTCTCTGACAATAGGAATGTGACGCTCTAAGAAAAGCCAGCTGGAGCAA i aotNan1.NW_018505377v1 I 658 C 0 s micMur3.chr22 3982637 77 - 30143674 TAAGGGGT----GGATGTTCTGATCCTGCAGCTTTGCTGACGTCAGGAACGCGAAGCCGTCAGAAAAGCCAGCCACGGCAA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 597224 75 + 2501019 CAAGGG------GGATGTTCTGATCCCGCAGCTTTGCTGACGTCAGGAACATGAAGCCGTCATAGAAGCCAGTCACAGCGC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5508095 75 + 5549422 TAAGGG------GGATGTTCTGATCCTGCAACTTTGCTGACATGAGGAATTCGAAGCCCTCATAAATGCCAGCCATAGCAA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111123488 69 - 145441459 GATGCG------AGATGTTCTCATTTTTTGGCTTTTCTGACACAAGGAATGTGAAGGTCTTGTAAAAGCCAG------CAG i mm10.chr7 I 1 C 0 s canFam3.chr1 4638920 44 - 122678785 -------TCTGTGGATGTCTGTATTCTGCTGCTCTCC--ACCTTAGG-ATGTGA--------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 373713 75 + 643850 TAAGTG------GGATGCCCATGTTTCACAGCCTTTCTGATATTAGGAATTAGAAGTCCTTATAAAAGCCAAACAGAGCAA i dasNov3.JH563638 C 0 M 964 e calJac3.chr22 28586617 1008 + 49145316 I e manLeu1.NW_012102454v1 921454 293 - 2385121 I e cerAty1.NW_012005268v1 5486583 292 + 7714307 I e macNem1.NW_012011689v1 4559777 292 - 13342542 I e macFas5.chr19 34691371 288 + 59248254 I e rheMac8.chr19 30237523 401 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=50452.000000 s hg38.chr19_GL383574v1_alt 101475 10 + 155864 ATCTGC---TTTT s panTro5.chr19 36169427 10 + 61309027 ATCTGC---TTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913203 10 + 64411610 ATCTGC---TTTT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922463 10 - 106955855 ATCTGC---TTTT i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29292512 10 + 50890351 ATCTGC---TTTT i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2364678 10 + 4274983 ATCTGC---TTTT i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5430605 10 + 8899380 ATAGAA---TTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1640647 13 - 2680843 ATCGAATTTTTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 387680 10 - 4471408 ATAGAG---TTTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3982714 10 - 30143674 ATCTGC---TTTT i micMur3.chr22 C 0 I 207 s proCoq1.NW_012149263v1 597299 10 + 2501019 ATCTGC---TTTC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5508170 10 + 5549422 ATCTGC---TCTT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111123557 10 - 145441459 ACCTGC---TTTT i mm10.chr7 C 0 C 0 s canFam3.chr1 4638964 10 - 122678785 ATCTGC---TTTT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 373788 964 + 643850 M e calJac3.chr22 28586617 1008 + 49145316 I e manLeu1.NW_012102454v1 921454 293 - 2385121 I e cerAty1.NW_012005268v1 5486583 292 + 7714307 I e macNem1.NW_012011689v1 4559777 292 - 13342542 I e macFas5.chr19 34691371 288 + 59248254 I e rheMac8.chr19 30237523 401 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=132172.000000 s hg38.chr19_GL383574v1_alt 101485 28 + 155864 ------TTTC--TCAGCAGGGAGAGCCAGCT-C--------CTGC s panTro5.chr19 36169437 28 + 61309027 ------TTTC--TCAGCAGGGAGAGCCAGCT-C--------CTGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913213 28 + 64411610 ------TTTC--TCAGCAGGGAGAGCCAGCT-C--------CTGC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922473 28 - 106955855 ------TTTC--TCAGCAGGGAGAGCCAGCT-C--------CTGC i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29292522 36 + 50890351 ------TTTC--TCAGCAGGCAGAGCCAGCT-CCTGCTGAGCTGC i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2364688 36 + 4274983 ------CTTC--TCAGCAGGCAGAGCCAGCT-CCTGCTGAGCTGC i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5430615 28 + 8899380 ------TTTC--TCAGCAGGGAGAGCCAGCT-C--------CTGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1640660 28 - 2680843 ------TTTC--TCAGCAGGGAGAGCCAGCT-C--------CTGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 387690 29 - 4471408 ------TTTC--TCAGCAGGGAGAGCCAGCTCC--------CTGC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 597309 28 + 2501019 ------CTTC--TCAGCAAGGGGAGCCATCT-C--------CTGC i proCoq1.NW_012149263v1 C 0 I 204 s otoGar3.GL873654 5508180 28 + 5549422 ------CTTC--TCAGCAAGGGGAGCTATCT-C--------CTGC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111123567 18 - 145441459 ------TCTC--TCAGCAG----------CT-C--------CAGC i mm10.chr7 C 0 C 0 s canFam3.chr1 4638974 36 - 122678785 TTTTTTTTTCCATCAGCAAAGAGAGGCATCT-C--------ATGC i canFam3.chr1 C 0 C 0 e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e calJac3.chr22 28586617 1008 + 49145316 I e manLeu1.NW_012102454v1 921454 293 - 2385121 I e cerAty1.NW_012005268v1 5486583 292 + 7714307 I e macNem1.NW_012011689v1 4559777 292 - 13342542 I e macFas5.chr19 34691371 288 + 59248254 I e rheMac8.chr19 30237523 401 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=28688.000000 s hg38.chr19_GL383574v1_alt 101513 7 + 155864 TGAGATC s panTro5.chr19 36169465 7 + 61309027 TGAGATC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913241 7 + 64411610 TGAGATC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922501 7 - 106955855 TGAGATC i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29292558 7 + 50890351 TGAGATC i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2364724 7 + 4274983 TGAGATC i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5430643 7 + 8899380 TGAGATC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1640688 7 - 2680843 TGAGATC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 387719 7 - 4471408 TGAGATC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5508208 7 + 5549422 CAAGGTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111123585 7 - 145441459 CAAGGTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4639010 7 - 122678785 CACAGCC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e calJac3.chr22 28586617 1008 + 49145316 I e manLeu1.NW_012102454v1 921454 293 - 2385121 I e cerAty1.NW_012005268v1 5486583 292 + 7714307 I e macNem1.NW_012011689v1 4559777 292 - 13342542 I e macFas5.chr19 34691371 288 + 59248254 I e rheMac8.chr19 30237523 401 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=33806.000000 s hg38.chr19_GL383574v1_alt 101520 8 + 155864 AGGGTACA s panTro5.chr19 36169472 8 + 61309027 AGGGTACA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913248 8 + 64411610 AGGGTACA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922508 8 - 106955855 AGGGTGCA i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29292565 8 + 50890351 AGAGTGCA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2364731 8 + 4274983 AGAGTGCA i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5430650 8 + 8899380 AGGGTGCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1640695 8 - 2680843 AGGGTGCA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 387726 8 - 4471408 AGGGTGCA i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111123592 8 - 145441459 AAAGTGCA i mm10.chr7 C 0 C 0 s canFam3.chr1 4639017 8 - 122678785 AAGGTGCA i canFam3.chr1 C 0 I 57 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508215 0 + 5549422 C e calJac3.chr22 28586617 1008 + 49145316 I e manLeu1.NW_012102454v1 921454 293 - 2385121 I e cerAty1.NW_012005268v1 5486583 292 + 7714307 I e macNem1.NW_012011689v1 4559777 292 - 13342542 I e macFas5.chr19 34691371 288 + 59248254 I e rheMac8.chr19 30237523 401 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=4095.000000 s hg38.chr19_GL383574v1_alt 101528 1 + 155864 t s panTro5.chr19 36169480 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913256 1 + 64411610 t i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922516 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29292573 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2364739 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5430658 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1640703 1 - 2680843 t i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 387734 1 - 4471408 t i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111123600 1 - 145441459 T i mm10.chr7 C 0 I 1 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508215 0 + 5549422 C e canFam3.chr1 4639025 57 - 122678785 I e calJac3.chr22 28586617 1008 + 49145316 I e manLeu1.NW_012102454v1 921454 293 - 2385121 I e cerAty1.NW_012005268v1 5486583 292 + 7714307 I e macNem1.NW_012011689v1 4559777 292 - 13342542 I e macFas5.chr19 34691371 288 + 59248254 I e rheMac8.chr19 30237523 401 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=19980.000000 s hg38.chr19_GL383574v1_alt 101529 6 + 155864 tttctt s panTro5.chr19 36169481 6 + 61309027 Tttctt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913257 6 + 64411610 tttctt i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922517 6 - 106955855 TTTCtt i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29292574 6 + 50890351 TTTCtt i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2364740 6 + 4274983 tttctt i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5430659 6 + 8899380 TTTCTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1640704 6 - 2680843 tttctt i cebCap1.NW_016107633v1 C 0 I 462 s aotNan1.NW_018505377v1 387735 6 - 4471408 tttctt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508215 0 + 5549422 C e mm10.chr7 111123601 1 - 145441459 I e canFam3.chr1 4639025 57 - 122678785 I e calJac3.chr22 28586617 1008 + 49145316 I e manLeu1.NW_012102454v1 921454 293 - 2385121 I e cerAty1.NW_012005268v1 5486583 292 + 7714307 I e macNem1.NW_012011689v1 4559777 292 - 13342542 I e macFas5.chr19 34691371 288 + 59248254 I e rheMac8.chr19 30237523 401 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=8174.000000 s hg38.chr19_GL383574v1_alt 101535 13 + 155864 -tctttttcctttt s panTro5.chr19 36169487 13 + 61309027 -tctttttcctttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913263 13 + 64411610 -tctttttcctttt i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63922523 13 - 106955855 -tctttttcttttt i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29292580 10 + 50890351 -tctttctttc--- i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2364746 10 + 4274983 -tctttctttc--- i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5430665 13 + 8899380 ATTTTTTGGTTTT- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 387741 13 - 4471408 attttttgctttt- i aotNan1.NW_018505377v1 C 0 I 451 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508215 0 + 5549422 C e mm10.chr7 111123601 1 - 145441459 I e canFam3.chr1 4639025 57 - 122678785 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e calJac3.chr22 28586617 1008 + 49145316 I e manLeu1.NW_012102454v1 921454 293 - 2385121 I e cerAty1.NW_012005268v1 5486583 292 + 7714307 I e macNem1.NW_012011689v1 4559777 292 - 13342542 I e macFas5.chr19 34691371 288 + 59248254 I e rheMac8.chr19 30237523 401 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=3822.000000 s hg38.chr19_GL383574v1_alt 101548 8 + 155864 cttttttt- s panTro5.chr19 36169500 8 + 61309027 cttttttt- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39913276 8 + 64411610 cttttttt- i panPan2.chr19 C 0 I 1846 s nomLeu3.chr10 63922536 8 - 106955855 ctttttct- i nomLeu3.chr10 C 0 C 0 s saiBol1.JH378197 5430678 8 + 8899380 -TGTTTTTG i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508215 0 + 5549422 C e mm10.chr7 111123601 1 - 145441459 I e chlSab2.chr6 29292590 0 + 50890351 C e canFam3.chr1 4639025 57 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e calJac3.chr22 28586617 1008 + 49145316 I e colAng1.NW_012111697v1 2364756 0 + 4274983 C e manLeu1.NW_012102454v1 921454 293 - 2385121 I e cerAty1.NW_012005268v1 5486583 292 + 7714307 I e macNem1.NW_012011689v1 4559777 292 - 13342542 I e macFas5.chr19 34691371 288 + 59248254 I e rheMac8.chr19 30237523 401 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=37185.000000 s hg38.chr19_GL383574v1_alt 101556 65 + 155864 ctttttttttttt----------------------------------------------------------------------------------------------ttttttgagac----agagtctcactctttcccccaggctggagtgcaatggcgtg s panTro5.chr19 36169508 50 + 61309027 -------------------------------------------------------------------------------------------------------------ttttgaaac----ggagtctcactctttcccccaggctggagtgcaatggcgtg i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63922544 59 - 106955855 ------ttttttt----------------------------------------------------------------------------------------------ttttttgagac----agagtctcactctttcccccaggctggagtgcaatggtgtg i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29292590 62 + 50890351 ---tttttttttt----------------------------------------------------------------------------------------------ttttttgagac----ggagtctcgctgtttcgcccaggctggagtgcaatggcgtg i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2364756 61 + 4274983 --------ttttt----------------------------------------------------------------------------------------------ttttttgagacggaaggagtcttgctgtttcacccaggctggagtgcaacggcgtg i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5430686 157 + 8899380 --GTTTCttttttaaaaaatttatttaatttaCTTTAGGTTCATACTATATCTGGCATTTCTCCCCATGTTATCCTTCCCCACCCCCCCGCCACCCCCTGATTTTGGtttcttttgat----ggagtcttgctctgttgcccaggctggagtgcagtggtgcg i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508215 0 + 5549422 C e mm10.chr7 111123601 1 - 145441459 I e canFam3.chr1 4639025 57 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e calJac3.chr22 28586617 1008 + 49145316 I e manLeu1.NW_012102454v1 921454 293 - 2385121 I e cerAty1.NW_012005268v1 5486583 292 + 7714307 I e macNem1.NW_012011689v1 4559777 292 - 13342542 I e macFas5.chr19 34691371 288 + 59248254 I e rheMac8.chr19 30237523 401 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=6369.000000 s hg38.chr19_GL383574v1_alt 101621 4 + 155864 atct s panTro5.chr19 36169558 4 + 61309027 atct i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63922603 4 - 106955855 atct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34691659 4 + 59248254 aCCC i macFas5.chr19 I 288 C 0 s chlSab2.chr6 29292652 4 + 50890351 atct i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2364817 4 + 4274983 atct i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5430843 4 + 8899380 atct i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508215 0 + 5549422 C e mm10.chr7 111123601 1 - 145441459 I e canFam3.chr1 4639025 57 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e calJac3.chr22 28586617 1008 + 49145316 I e manLeu1.NW_012102454v1 921454 293 - 2385121 I e cerAty1.NW_012005268v1 5486583 292 + 7714307 I e macNem1.NW_012011689v1 4559777 292 - 13342542 I e rheMac8.chr19 30237523 401 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=133174.000000 s hg38.chr19_GL383574v1_alt 101625 36 + 155864 tgactcactgcaacctccacctccccggttcaagcg s panTro5.chr19 36169562 36 + 61309027 tgactcactgcaacctccacctccccggttcaagcg i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63922607 36 - 106955855 tgactcactgcaacctccgcctccccggttcaagcg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34691663 36 + 59248254 Tgactcactgcaacctctgcctccccggttcaagca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4560069 36 - 13342542 Tgactcactgcaacctctgcctccccggttcaagca i macNem1.NW_012011689v1 I 292 C 0 s cerAty1.NW_012005268v1 5486875 36 + 7714307 Tgactcactgcaacctctgcctccccggctcaagca i cerAty1.NW_012005268v1 I 292 C 0 s chlSab2.chr6 29292656 36 + 50890351 tgactcactgcaacctctgcctccctagttcaagca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921747 36 - 2385121 Tgactcactgcaacctctgcctccccgtttcaagca i manLeu1.NW_012102454v1 I 293 C 0 s colAng1.NW_012111697v1 2364821 36 + 4274983 tgactcactgcaatctctgcctcccaggttcaaccg i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5430847 36 + 8899380 tggctcactgcaacgtccgcctcccaggttcaagca i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508215 0 + 5549422 C e mm10.chr7 111123601 1 - 145441459 I e canFam3.chr1 4639025 57 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e calJac3.chr22 28586617 1008 + 49145316 I e rheMac8.chr19 30237523 401 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=5005.000000 s hg38.chr19_GL383574v1_alt 101661 1 + 155864 a s panTro5.chr19 36169598 1 + 61309027 a i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63922643 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237924 1 + 53671032 a i rheMac8.chr19 I 401 C 0 s macFas5.chr19 34691699 1 + 59248254 a i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4560105 1 - 13342542 a i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486911 1 + 7714307 a i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292692 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921783 1 - 2385121 a i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364857 1 + 4274983 a i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5430883 1 + 8899380 a i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508215 0 + 5549422 C e mm10.chr7 111123601 1 - 145441459 I e canFam3.chr1 4639025 57 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=716298.000000 s hg38.chr19_GL383574v1_alt 101662 200 + 155864 ttctcctgcttcagcctcccaagtagctgggatgacaggcacctgccaccactcccagctaatttttgtatttttaatagagatggggtttcaccatgttggccaggctggtctccaactcctgacctcaggtgatccgcccgcctcagcttcccaaagtgctgggattacaggcgtgagccaccaggccgggccttctt s panTro5.chr19 36169599 200 + 61309027 ttctcctgctttagcctcccaagtagctgggatgacaggcacctgccaccactcccacctaatttttgtatttttaatagagacggggtttcaccatgttggccaggctggtctccaactcctgacctcaggtgatccgcccgcctcagcttcccaaagtgctgggattacaggcgtgagccaccaggccgggccttctt i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63922644 200 - 106955855 ttctcctgcttcagcttcccgtgtagctgggatgacaggcgcctgccaccactcccggctaatttttgtatttttagtagagacggggtttcaccatgttagccaagctggtctccaactcctgacctcaggcgatccgcccgcctcagcttcccaaagtgctgggattacaggcgtgagccaccgggccgggctttctt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30237925 200 + 53671032 ttctcctgcttcggcctcccaagtagctgggatgacaggtgcctaccaccacacatggctaatttttgtatttttagtagagacggagtttcaccatgttggccaggctggtctccaactcctgacctcaggcgatctgcctgcctcagctttccaaagtgctgggattacaggcatgagccaccttgcctagctttttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34691700 200 + 59248254 ttctcctgcttcagcctcccaagtagctgggatgacaggtgcctaccaccacacatggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctccaactcctgacctcaggcgatctgcctgcctcagctttccaaagtgctgggattacaggcatgagccaccttgcctagctttttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4560106 200 - 13342542 ttctcctgcttcagcctcccaagtagctgggatgacaggtgcctaccaccacacatggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctccaactcctgacctcaggtgatctgcctgcctcagctttccaaagtgctgggattacaggcatgagccaccttgcctagctttttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5486912 200 + 7714307 ttctcctgcatcagcctcccaagtagctgggatgacaggtgcctaccaccacacatagctaatttttgtattttcagtagagacggggtttcaccatgttgaccaggctggtctccaactcctgacctcaggcgatctgcctacctcagctttccaaagtgctgggattacaggcatgagccaccttgcctagctttttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292693 200 + 50890351 ttctccggcttcagcctcccaagtagctgggatgacaggcgcctgccaccacacctggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctccaactcctgacctcaagcgatctgcctgcctcagcttcccaaagtgctgggattacaggcgtgagccaccttgcctggctttttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921784 200 - 2385121 ttctcctgcttcagcctcccaagtagctgggatgacaggtgcctaccaccacacatggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctccaactcctgacctcaggcaatctgcctgcctcagctttccaaagtgctgggattacaggcatgagccaccttgcctagctttttt i manLeu1.NW_012102454v1 C 0 C 0 s saiBol1.JH378197 5430884 197 + 8899380 -ttctctgcctcagacttccaagcagttgagattacagatgccctccaccatgcccagccagtttttgtatttttagtagagacaggttttcaccatcttgtccaggctggtcttgaactcctgacctt--gtgatccacccgcctagtcctcccaaagtgctgggaatatagttataagccaccacacccggccTGCTT i saiBol1.JH378197 C 0 I 42 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508215 0 + 5549422 C e mm10.chr7 111123601 1 - 145441459 I e canFam3.chr1 4639025 57 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e calJac3.chr22 28586617 1008 + 49145316 I e colAng1.NW_012111697v1 2364858 0 + 4274983 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=292873.000000 s hg38.chr19_GL383574v1_alt 101862 107 + 155864 t-tttttttttttttttttttgagatg--gaatctccctctgttgcccaggctggagtgcaatggcgtgatctc-ggctcactacaacctccacctcccagcttcaacctc s panTro5.chr19 36169799 105 + 61309027 c-ttttttttttttttttt--gagatg--gaatctccctctgttgcccaggctggagtgcaatggcgtgatctc-ggctcactacaacctccacctaccagcttcaacctc i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63922844 108 - 106955855 t-cttttcttttttttttt-tgagatggagagtcttcttctgtcgcccaggctggagtgcaatggcgcgatctc-ggctcattacaacctctgcctcccaggttcaaccta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30238125 108 + 53671032 t-ttgttttgtttgtttttttgagatg--gagtctccctctgtcacccagactggagtacaatggcgtgatctcgggctcactacaacctccgcctcccaggttcaaccga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34691900 108 + 59248254 t-ttgttttgtttgtttttttgagatg--gagtctccctctgtcacccagactggagtacaatggcgtgatctcgggctcactacaacctccgcctcccaggttcaaccga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4560306 108 - 13342542 t-ttgttttgtttgtttttttgagatg--gagtctccctctgtcacctagactggagtacaatggcgtgatctcgggctcactacaacctccgcctcccaggttcaaccga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5487112 108 + 7714307 t-ttgttttgtttgtttttttgagatg--gagtctccctctgtcacccagactggagtacaatggcgtgatctcgggctcactacaacctccgcctcccaggttcaactga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29292893 109 + 50890351 tgttgttttgtttgtttttttgagatg--gagtctccctctgtcacccagactggagtgcaatggcgtgatcttgggctcactacaacctccacctcccaggttcaaccga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 921984 109 - 2385121 tttttgtttgtttgtttttttgagatg--gagtctccctctgtcacccagactggagtacaatggcgtgatctcaggctcactacaacctccgcctcccaggttcaaccga i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508215 0 + 5549422 C e mm10.chr7 111123601 1 - 145441459 I e canFam3.chr1 4639025 57 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e colAng1.NW_012111697v1 2364858 0 + 4274983 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=765309.000000 s hg38.chr19_GL383574v1_alt 101969 196 + 155864 ttctcctgccttagcctcccaagtagctgcgattacaggcatgtaccaccatgcctggcaaatttttgtatttttagtagagatggggtttcaccatgttggtcaggcttgtcttgaact-cccgacctcaggtgatccgcctgcctcagcctcccaaagtgctgggattacaggcgtcagccaccatgcccggccT s panTro5.chr19 36169904 196 + 61309027 ttctcctgccttagcctcccaagtagctgcgattacaggcatgcgccaccatgcctggcaaatttttgtatttttagtagagatggggttttaccatgttggtcaggcttgtcttgaact-cctgacctcaggtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgcccggccT i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63922952 196 - 106955855 ttctcctgccttagccttccaagtagctgcgattacaggcatgtgccaccacgcctggcaaatttttgtatttttagtagagatggggtttcaccatttttgtcaggctggtcttgaact-cctgacctcaggtgatctgcccgcctcagcctcctaaagtgctgggattacaggcgtgagccaccgagcctggccC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30238233 196 + 53671032 ttctcctgccttagcctgccgagtagctgtgattacaggcgtgtgccaccatgcctggcaaatttttgtatttttagtagagatggggtttcaccatgttggtcaggatggtctcgaact-cctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaagtgtgagccaccatgtccagccC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34692008 196 + 59248254 ttctcctgccttagcctgccgagtagctgtgattacaggcgtgtgccaccatgcctggcaaatttttgtatttttagtagagatggggtttcaccatgttggtcaggatggtctcgaact-cctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaagtgtgagccaccatgtccagccC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4560414 196 - 13342542 ttctcctgccttagcctgccgagtagctgtgattacaggcgtgtgccaccatgcctggcaaatttttgtatttttagtagagatggggtttcaccatgttggtcaggatggtctcgaact-cctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaagtgtgagccaccatgtccagccC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5487220 196 + 7714307 ttctcctgccttagcctaccgagtagctgcgtttacaggcatgtgccaccatgcctggcaaatttttgtatttttagtagagatggggtttcaccatgttggtcaggatggtctcgaact-cctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggattacaagtgtgagccaccatgtccagccT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29293002 197 + 50890351 ttctcctgccttagcctgccgagtagctgcgattacaggcatgcgccaccatgcctggcaaatttttgtatttttagtagagatggggtttcaccatgttggtcaggatggtctcgaactgccggacctcaggtgatccacccgcctaggcctcccaaagtgctgggattacaagtgtgagccaccatgcccggccC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 922093 196 - 2385121 ttctcctgccttagcctgccgagtagctgcgattacaggcgtgtgccaccatgcctggcaaatttttgtatttttagtagagatgggatttcaccatgttggtcaggatggtctcgaact-cctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaagtgtgagccaccatgtccagccC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2364858 196 + 4274983 ttctcctgccttagcctgccaagtagctgcgattacaggcgtgtgccaccatgcctggcaaatttttgtatttttagtagagatggggtttcaccatgttggtcaggatggtctcgaact-cctgacctcaggtgatttgcccacctcggcctcccaaagtgctgggattgcaagtgtgggccaccatgcccggccC i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508215 0 + 5549422 C e mm10.chr7 111123601 1 - 145441459 I e canFam3.chr1 4639025 57 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=51215.000000 s hg38.chr19_GL383574v1_alt 102165 10 + 155864 AGGGTGCATT s panTro5.chr19 36170100 10 + 61309027 AGGGTGCATT i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63923148 10 - 106955855 AGGGTGCATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30238429 10 + 53671032 AGGGTGCATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34692204 10 + 59248254 AGGGTGCATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4560610 10 - 13342542 AGGGTGCATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5487416 10 + 7714307 AGGGTGCATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29293199 10 + 50890351 AGGGTGCATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 922289 10 - 2385121 AGGGTGCATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2365054 10 + 4274983 AGGGTGCATT i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5508215 10 + 5549422 AAGGTGCATT i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e mm10.chr7 111123601 1 - 145441459 I e canFam3.chr1 4639025 57 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=326989.000000 s hg38.chr19_GL383574v1_alt 102175 79 + 155864 TCTTTGGCATCTCT--CACAAATGTGGGTCTCGTTCAT-CCCAGCTCTTGGGTCACAGAGGAGCTCCTGAAGCCTCCTTCCA s panTro5.chr19 36170110 79 + 61309027 TCTTTGGCATCTCT--CACAAATATGGGTCTTGTTCAT-TCCAGCTCTTGGGTCACAGAGGAGCTCCTGAAGCCTCCTTCCA i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63923158 79 - 106955855 TCTTTGGCATCTCA--CACAAATGTGGGTCTCGTTCAT-TCCAGCTCTTGGGTCACGGAGGAGCTCCTGAAGCCTCCTTCCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30238439 78 + 53671032 TCTTTGGCATCTCT--TACAAATGCGGGTCTTGTTCA--TCCAGCTCTTGGGTCATGGAGGAGCTCCTGAAGCCTCCTTCTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34692214 78 + 59248254 TCTTTGGCATCTCT--TACAAATGCGGGTCTTGTTCA--TCCAGCTCTTGGGTCATGGAGGAGCTCCTGAAGCCTCCTTCTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4560620 78 - 13342542 TCTTTGGCATCTCT--TACAAATGCGGGTCTTGTTCA--TCCAGCTCTTGGGTCATGGAGGAGCTCCTGAAGCCTCCTTCTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5487426 78 + 7714307 TCTTTGGTATCTCT--TACAAATGCGGGTCTTGTTCA--TCCAGCTCTTGGGTCATGGAGGAGCTCCTGAAGCCTCCTTCTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29293209 79 + 50890351 TCTTTGGCATCTCT--CACAAATGCGGGTCTCATTCAT-TCCAGCTCTTGGGTCATGGAGGAGCTCCTGAAGCCTCCTTCTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 922299 78 - 2385121 TCTTTGGCATCTCT--TACAAATGCGGGTCTTGTTCA--TCCAGCTCTTGGGTCATGGAGGAGCTCCTGAAGCCTCCTCCTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2365064 81 + 4274983 TCTTTGGCATCTCTCACACAAATGCGGGTCTCGTTCAT-TCCAGCTCTTGGGTCATGGAGGAGCTCCTGAAGCCTCCTTCTA i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5508225 75 + 5549422 GCTGTGGCTCAACT--CACTTCTGCAAGTCTTGTTCAC-TTTGGCTCTTTAAT----GAGGAGCTCCTGACACTTCCTTCTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111123602 67 - 145441459 TCTATGGTCTATCT--CACTAAGGCAGGTTCTGGTCCTGCCTGGCCTGTTCAGTGTAGAAGGG-------------CTTCTA i mm10.chr7 I 1 C 0 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e canFam3.chr1 4639025 57 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=293722.000000 s hg38.chr19_GL383574v1_alt 102254 57 + 155864 CTCATTTGTCATAGGC---ACCAACCTCAGAGACGCTCATGTTTTTCACGGGACCCGGCT s panTro5.chr19 36170189 57 + 61309027 CTCATTTGTCATAGGC---ACCAACCTCAGAGAAGCTCATGTTTTTCACGGGACCCGGCT i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63923237 57 - 106955855 CTCATCTGTCACAGGC---ACAAACCTCAGAGATGCTCATGCTTTTCACAGGACCTGACT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30238517 57 + 53671032 CTCATTTGTCACAGGC---ACCAATCTCAGAGACGCTCATGCTTTTCACGGGACCTGGCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34692292 57 + 59248254 CTCATTTGTCACAGGC---ACCAATCTCAGAGACGCTCATGCTTTTCACGGGACCTGGCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4560698 57 - 13342542 CTCATTTGTCACAGGC---ACCAATCTCAGAGACGCTCATGCTTTTCACGGGACCTGGCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5487504 57 + 7714307 CTCATTTGTCACGGGC---ACCAACCTCAGAGACGCTCATGCTTTTCACGGGACCTGGCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29293288 57 + 50890351 CTCATTTGTCACAGGC---ACCAACCTCAGAGACGCTCGTGCTTTTCACGGGACCTGGCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 922377 57 - 2385121 CTCATTTGTCACAGGC---ACCAACCTCAGAGATGCTCATGCTTTTCACAGGACCTGGCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2365145 57 + 4274983 CTCATTTGTCACAGGC---ACCAACCTCAGAGACGCTCATGCTTTTCATGGGACCTGGCT i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5508300 56 + 5549422 CTT-TTTGTCACAGGC---AACAGCCCTGCAGGCTCTCATCCCTTTCACGGGATGTGCCT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111123669 60 - 145441459 TTCACTTCTCATAGGCAGTACCAACCTCAGAGACGGTCATCCCTGTCAGCACATCCAGCT i mm10.chr7 C 0 I 1256 s canFam3.chr1 4639082 56 - 122678785 CTCACTTTCCAT-GGT---GATGACCTCTGAGGCTCTCATCCCGTCCACGGGATCTGGCT i canFam3.chr1 I 57 C 0 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=208759.000000 s hg38.chr19_GL383574v1_alt 102311 53 + 155864 ----CTAACTCTGCCTCTATCCAGATGCACAGGGG--------GCCAGATGCATTCCGGAGTGAC s panTro5.chr19 36170246 53 + 61309027 ----CTAACTCTGCCTCTATCCAGATGCACAGGGG--------GCCAGATGCATTCCGGAGTGAC i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63923294 53 - 106955855 ----CTAACTCTGCCTCTATCCAGATACACAGGTG--------GCTAGCTGCATTCCGGAGTGAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30238574 53 + 53671032 ----CTAACTCTGCCTCTATGCAGATACACAGGGG--------GCCAGCTGCATTCTGGAGAGGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34692349 53 + 59248254 ----CTAACTCTGCCTCTATGCAGATACACAGGGG--------GCCAGCTGCATTCTGGAGAGGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4560755 53 - 13342542 ----CTAACTCTGCCTCTATGCAGATACACAGGGG--------GCCAGCTGCATTCTGGAGAGGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5487561 53 + 7714307 ----CTAACTCTGCCTCTATGCAGATACACAGGGG--------GCCAGCTGCATTCTGGAGAGGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29293345 53 + 50890351 ----CTAACTCTGCCTCTATGCAGATACACAGGGG--------GCCAGCTGCATTCTGGAGAGAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 922434 53 - 2385121 ----CTAACTCTGCCTCTATGCAGATACACAGGGG--------GCCAGCTGCATTCTGGAGAGGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2365202 53 + 4274983 ----CTAACTCTGCCTCGATGCAGATACACAGGGG--------GCCAGCTGCATTCTGGAGAGAT i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5508356 33 + 5549422 ----CTAACTCTGCC-CAAAGCAGATTCA---------------------------GGGAGAGAC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4639138 63 - 122678785 CCAACCATCTGTGCCTCTGACCAGATACGAGGGGTGGGGGGGCGTCGGGTGGATCCAGGAAGA-- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 597337 204 + 2501019 I e micMur3.chr22 3982724 207 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e mm10.chr7 111123729 1256 - 145441459 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=894894.000000 s hg38.chr19_GL383574v1_alt 102364 135 + 155864 CCCTGTTTCCTGGTCTTGA----CCTTCTTGGCCTCCTAAACAGCAAATTACAGGTATAGGTCTGGTGGTCTCTAAGGCACCATCTCATGCCTGTGTGGATGCTGAGGGTCCAGTTCACAGACCTTTCTGCAGAGCTGG s panTro5.chr19 36170299 135 + 61309027 CCCTGTTTCCTGGTCTTGA----CCTTCTTGGCCTCCTAAACAGCAAATTACAGGTATAGGTCTGGTGGTCTCTAAGGCACCATCTCATGCCTGTGTGGATGCTGAGGGTCCAGTTCACAGACCTTTCTGCAGAGCTGG i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63923347 135 - 106955855 CCTTGTTTCCTGGTCTTGA----CCTTCTTGGCCTCCTAAACAGCAAATTACAGGTATAGGTCTGGTGGTCTCTAAGGCACCATCTCATGCCTGTGTGCATGCTGAGGGTCCAGTTCACAGACCTTTCTGCAGAGCTGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30238627 135 + 53671032 CTCTGTTTCCTGGTCTTGA----CCTTCTTGGCCTCCTAAACAGCAAATTACAGGTGTAGGTCTGGTGGTCTCTAAGGCACCATCTCATGCCTATGCACGTGCTGAGGCTCCGATTCACAGACCTTTCTGCAGAGCTGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34692402 135 + 59248254 CTCTGTTTCCTGGTCTTGA----CCTTCTTGGCCTCCTAAACAGCAAATTACAGGTGTAGGTCTGGTGGTCTCTAAGGCACCATCTCATGCCTGTGCACGTGCTGAGGCTCCGATTCACAGACTTTTCTGCAGAGCTGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4560808 135 - 13342542 CTCTGTTTCCTGGTCTTGA----CCTTCTTGGCCTCCTAAACAGCAAATTACAGGTGTTGGTCTGGTGGTCTCTAAGGCACCATCTCATGCCTGTGCACGTGCTGAGGCTCCGATTCACAGACCTTTCTGCAGAGCTGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5487614 135 + 7714307 CTCTGTTTCCTGGTCTTGA----CCTTCTTGGCCTCCTAAACAGCAAATTACAGGTGTAGGTCTGGTGGTCTCTAAGGCACCATCTCATGCCTGTGCACGTGCTGAGGCTCCGATTCACAGACCTTTCTGCAGAGCTGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29293398 135 + 50890351 CTCTGTTTCCTGGTCTTGA----CCTTCTTGGCCTCCTAAACAACAAATTACAGGTGTAGGTCCGGTGGTCTCTAAGGCACCATCTCATGCCTGTGCACATGCTGAGGCTCCGATTCACAGACCTTTCTGCAGAGCTGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 922487 135 - 2385121 CTCTGTTTCCTGGTCTTGA----CCTTCTTGGCCTCCTAAACAGCAAATTACAGGTGTAGGTCTGGTGGTCTCTAAGGCACCATCTCATGCCTGTGCACGTGCTGAGGCTCCGATTCACAGACCTTTCTGCAGAGCTGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2365255 135 + 4274983 CTCTGTTTCCTGGTCTTGA----CCTTCTTGGCCTCCTAAACAGCAAATTACAGGTGTAGGTCTGGTGGTCTCTAAGGCACCATCTCATGCCTGTGCACATGCTGAGGCTCCGATTCACAGACCTTTCTGCAGAGCTGG i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3982931 128 - 30143674 CCCTGTTCCCTGGCCTTGA----CCTTCGTGGCCTCTTAAATAGCAAATCG-------AGGTGTGGTGGCCTCTGAGGCACCGTCCCATCCCTGTGTGCACGCTGAGGCTCCAATTCACAGACCTCTCTGCAGAGCTGG i micMur3.chr22 I 207 I 169 s proCoq1.NW_012149263v1 597541 135 + 2501019 CCCTGTTCCCTGGCTTTGA----TCTTCCTGGCCTCCTAAACAGCAAATGGAGGGTGTAGGTGTGGTGGCCTCTCGGGCACCGTCCCATCCCTGTGTGCATGCTGAGGCTCCAATCCACAGACCTACCTGCAGAGCTGG i proCoq1.NW_012149263v1 I 204 C 0 s otoGar3.GL873654 5508389 134 + 5549422 -CCTGTTCCCTGACCATGA----TCTTCTTGGCCTCCTAAAGAGCTAATCGAGGGAGTAGGTGTGGCGGTCTCTGAGGCAGCATCCCATTCCTATGTGCATGTTGAGGCTCCAATTCTCAGACCTATCTGCAGAGATGA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4639201 118 - 122678785 -----------GACCTTGAAATGCCTTCTTGGTGTCCTAAGTGGCAAGTTG-------AGGTCGGATGGTCTCTGGGATGCCACCCTAGCCCTGTGTGCATGGCAAGGCTCCAAT---CAGACCTCTCAGCAGAGTTGG i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 373788 964 + 643850 M e mm10.chr7 111123729 1256 - 145441459 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=68659.000000 s hg38.chr19_GL383574v1_alt 102499 12 + 155864 AAGGCCGTAGCT s panTro5.chr19 36170434 12 + 61309027 AAGGCCGTAGCT i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63923482 12 - 106955855 AAGGCCGTAGCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30238762 12 + 53671032 AAGGCCATAGCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34692537 12 + 59248254 AAGGCCATAGCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4560943 12 - 13342542 AAGGCCATAGCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5487749 12 + 7714307 AAGGCCATAGCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29293533 12 + 50890351 AAGGCCATAGCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 922622 12 - 2385121 AAGGCCATAGCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2365390 12 + 4274983 AAGGCCATAGCT i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 597676 12 + 2501019 GAGACCGAAGCT i proCoq1.NW_012149263v1 C 0 I 30 s otoGar3.GL873654 5508523 12 + 5549422 AAGACTGAAGCT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4639319 12 - 122678785 AGGATCACAGCT i canFam3.chr1 C 0 C 0 e micMur3.chr22 3983059 169 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e mm10.chr7 111123729 1256 - 145441459 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=63842.000000 s hg38.chr19_GL383574v1_alt 102511 17 + 155864 ACCATTCCTGAAG-----------------------ATGA s panTro5.chr19 36170446 17 + 61309027 ACCATTCCTGAAG-----------------------ACGA i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63923494 17 - 106955855 ACCATGCCTGAAG-----------------------AGGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30238774 17 + 53671032 ACCATTACTGAAG-----------------------AGGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34692549 17 + 59248254 ACCATTCCTGAAG-----------------------AGGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4560955 17 - 13342542 ACCATTCCTGAAG-----------------------AGGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5487761 17 + 7714307 ACCATTCCTGAAG-----------------------AGGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29293545 17 + 50890351 ACCATTCCTGAAG-----------------------AGGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 922634 17 - 2385121 ACCATTCCTGAAG-----------------------AGGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2365402 17 + 4274983 ACCATTCCTGAAG-----------------------AGGA i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5508535 30 + 5549422 ACTGCCCCTGAAGACATGA----------GGTCTCCAGGA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4639331 40 - 122678785 TCTGTCCCTGAAGACCGGGGGGCGGGGGTGGTTTCCAGGA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 597688 30 + 2501019 I e micMur3.chr22 3983059 169 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e mm10.chr7 111123729 1256 - 145441459 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=152561.000000 s hg38.chr19_GL383574v1_alt 102528 24 + 155864 GGGCCTGGCCTCCATCTTTAGACC s panTro5.chr19 36170463 24 + 61309027 GGGCCTGGCCTCCATCTTTAGACC i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63923511 24 - 106955855 GGGCCTGGCCTCCATCTTTAGACC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30238791 24 + 53671032 GGGCCTGGCTTCCATCTTTAGACC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34692566 24 + 59248254 GGGCCTGGCTTCCATCTTTAGACC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4560972 24 - 13342542 GGGCCTGGCTTCCATCTTTAGACC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5487778 24 + 7714307 GGGCCTGGCTTCCATCTTTAGACC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29293562 24 + 50890351 GGGCCTAGCTTCCATCTTTAGACC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 922651 24 - 2385121 GGGCCTGGCTTCCATCTTTAGACC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2365419 24 + 4274983 GGGCCTGGCTTCCATCTTTAGACC i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 597718 24 + 2501019 GGGCCTGGCCCCCATCTCTAGACC i proCoq1.NW_012149263v1 I 30 C 0 s otoGar3.GL873654 5508565 24 + 5549422 GGGCCAGGTCCTCATCTCTCCATC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4639371 24 - 122678785 GGGCCTGGCCACCATCTCTAGACC i canFam3.chr1 C 0 I 4 e micMur3.chr22 3983059 169 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e mm10.chr7 111123729 1256 - 145441459 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=30954.000000 s hg38.chr19_GL383574v1_alt 102552 6 + 155864 TGTGGG s panTro5.chr19 36170487 6 + 61309027 TGTGGG i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63923535 6 - 106955855 TGTGGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30238815 6 + 53671032 TGTGGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34692590 6 + 59248254 TGTGGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4560996 6 - 13342542 TGTGGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5487802 6 + 7714307 TGTGGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29293586 6 + 50890351 TGTGGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 922675 6 - 2385121 TGTGGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2365443 6 + 4274983 TGTGGA i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 597742 6 + 2501019 TGCGGG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5508589 6 + 5549422 CGTGGG i otoGar3.GL873654 C 0 C 0 e micMur3.chr22 3983059 169 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e mm10.chr7 111123729 1256 - 145441459 I e canFam3.chr1 4639395 4 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=67516.000000 s hg38.chr19_GL383574v1_alt 102558 15 + 155864 CTCCATCCCTTTTTC s panTro5.chr19 36170493 15 + 61309027 CTCCATCCCTTTTTC i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63923541 15 - 106955855 CTCCACCCCTTTTCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30238821 15 + 53671032 CTCCACCCCTTtttc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34692596 15 + 59248254 CTCCACCCCTTTTtc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4561002 15 - 13342542 CTCCACCCCTTtttc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5487808 15 + 7714307 CTCCACCCCTTTttc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29293592 15 + 50890351 CTCCACCCATTTttc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 922681 15 - 2385121 CTCCACCCCTTtttc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2365449 15 + 4274983 CTCCATCCCTTTttc i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5508595 15 + 5549422 CTCCATCCTTTTTGT i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 597748 0 + 2501019 C e micMur3.chr22 3983059 169 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e mm10.chr7 111123729 1256 - 145441459 I e canFam3.chr1 4639395 4 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=7566.000000 s hg38.chr19_GL383574v1_alt 102573 25 + 155864 tctt----------------ttctcttcccttct-------ctt-----tttt s panTro5.chr19 36170508 30 + 61309027 tctt----------------ttctcttcccttct-------cttctctttttt i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63923556 46 - 106955855 TCTTctcccctcccctcccctcccctccccttcc-------ctTCTCTTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30238836 13 + 53671032 tctt------------------ctcttc---ttt------------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34692611 16 + 59248254 tctt------------------ctcttctctttt------------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4561017 16 - 13342542 tctt------------------ctcttctctttt------------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5487823 11 + 7714307 tctt------------------ctcttc-----t------------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29293607 16 + 50890351 tctt------------------ctcttctttttt------------------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 922696 16 - 2385121 tctt------------------ctcttctctttt------------------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2365464 23 + 4274983 tctt------------------ctcttctcttctcttcttt------------ i colAng1.NW_012111697v1 C 0 T 4188 e proCoq1.NW_012149263v1 597748 0 + 2501019 C e micMur3.chr22 3983059 169 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508610 0 + 5549422 C e mm10.chr7 111123729 1256 - 145441459 I e canFam3.chr1 4639395 4 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=59232.000000 s hg38.chr19_GL383574v1_alt 102598 42 + 155864 ctcttcttttccttcttttcttttctttctcttt-------tcttt-tct s panTro5.chr19 36170538 50 + 61309027 ctcttcatttccttcttttcttttctttctctttcttttcttctttcttt i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63923602 48 - 106955855 CTTTCCTTTTCCTTCTTTCCTTTTCTTTCCCtttctttt--tttttcttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30238849 35 + 53671032 ctttctctctctttcttttc--ttctttcattttttt------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34692627 35 + 59248254 ctttctctctctttcttttc--ttctttcattttttt------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4561033 35 - 13342542 ctttctctctctttcttttc--ttctttcattttttt------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5487834 35 + 7714307 ctttctctctctttcttttc--ttctttcattttttt------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29293623 34 + 50890351 ctttctctctc-ttcttttc--ttctttcattttgtt------------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 922712 35 - 2385121 ctttctctctctttcttttc--ttctttcattttttt------------- i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 597748 0 + 2501019 C e micMur3.chr22 3983059 169 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508610 0 + 5549422 C e mm10.chr7 111123729 1256 - 145441459 I e canFam3.chr1 4639395 4 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e colAng1.NW_012111697v1 2365487 4188 + 4274983 T e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C e panPan2.chr19 39913284 1846 + 64411610 I a score=701925.000000 s hg38.chr19_GL383574v1_alt 102640 194 + 155864 tttttttttttgagacaaggtctgactctattgcccaggctgtagtgcgcagtggcgcaatctcagctcactgcaacctctcactcctgggctcaagcgatcctcccacctcagcctcccaagtagctgggactacaggtacatgccaccatgccaggctaatttttgttatttattattattattattttttg s panTro5.chr19 36170588 194 + 61309027 tttttttttttgagacaaggtctgactctattgcccaggctgtagtgcgcagtggcgcaatctcagctcactgcaacctctcactcctgggctcaagcgatcctcccacctcagcctcccaagtagctgggactacaggtacatgccaccatgccaggctaatttttgttatttattattattatttttttttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39915130 191 + 64411610 tttttttttttgagacaaggtctgactctattgcccaggctgtagtgcgcagtggcgcaatctcagctcactgcaacctctcactcctgggctcaagcgatcctcccacctcagcctcccaagtagctgggactacaggtacatgccaccatgccaggctaatttttgttatttattattatta---ttttttg i panPan2.chr19 I 1846 C 0 s nomLeu3.chr10 63923650 193 - 106955855 tttttttttttgagactaggtctgactctatcgcccaggctggagtgcacagttgtgcagtctcagctcactgcaacctctcactcctgggctcaagtgatcctcccacctcagcctcccaagtagctgggactacaggcacatgccaccatgccaggctaatttttg-tatttattattattatttttttttg i nomLeu3.chr10 C 0 I 361 s rheMac8.chr19 30238884 184 + 53671032 tgtttctttttgagacaaggtctgactctatcgcctaggctggggtgcgcagtggcgcaatctcagctcactgcaacctctccctcctgggctcaagtgatcctcccatctcagcctcccaagtagctgggactacaggcacatgccaccatgccaggctaatttttg-tattttttg---------ttttttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34692662 184 + 59248254 tgtttctttttgagacaaggtctgactctatcgcctaggctggggtgcgcagtggcgcaatctcagctcactgcaacctctccctcctgggctcaagtgatcctcccatctcagcctcccaagtagctgggactacaggcacatgccaccatgccaggctaatttttg-tattttttg---------ttttttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4561068 184 - 13342542 tgtttctttttgagacaaggtctgactctatcgcctaggctggggtgcgcagtggcgcaatctcagctcactgcaacctctccctcctgggctcaagtgatcctcccatctcagcctcccaagtagctgggactacaggcacatgccaccatgccaggctaatttttg-tattttttg---------ttttttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5487869 184 + 7714307 tgtttatttttgagacaaggtctgactctatcgcctcggctggggtgcgcagtggcgcaatctcagctcactgcaacctctccctcctgggctcaagtgatcctcccatctcagcctcccaagtagctgggactacaggcacatgccaccatgccaggctaatttttg-tattttttg---------ttttttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29293657 184 + 50890351 tgtttgtttttgagacaaggtctgactctatcacctaggctggagtgcgcaggggcacaatctcagctcactgcaacctctccctcctgggctcaagtgattctcccgtctcagcctcccaagtagctgggactacaggcacatgccaccattccaggctaatttttg-tattttttg---------ttttttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 922747 184 - 2385121 tgtttatttttgagacaaggtctgactctatcacctaggctggggtgcgcagtggtgcaatctcagctcactgcaacctctccctcctgggctcaagtgatcctcccatctcagcctcccaagtagctgggactacaggcatatgccaccatgccaggctaatttttg-tattttttg---------ttttttg i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 597748 0 + 2501019 C e micMur3.chr22 3983059 169 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508610 0 + 5549422 C e mm10.chr7 111123729 1256 - 145441459 I e canFam3.chr1 4639395 4 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e colAng1.NW_012111697v1 2365487 4188 + 4274983 T e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=672868.000000 s hg38.chr19_GL383574v1_alt 102834 174 + 155864 acacggagtcttgctctgttgcccaggctggagtgcaatggtgcgatcttggctcac-tgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggcatgagccaccatgcccagctaatttttttgtatttttaatagagacag s panTro5.chr19 36170782 174 + 61309027 acacggagtcttgctctgttgcccaggctggagtgcaatggtgcgatcttggctcac-tgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggcatgagccaccatgcccagctaatttttttgtatttttaatacagacag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39915321 174 + 64411610 acacggagtcttgctctgttgcccaggctggagtgcaatggtgcgatcttggctcac-tgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggcatgagccaccatgcccagctaatttttttgtatttttaatacagacag i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63924204 174 - 106955855 agacagagtcttgctttgttgcccaggctggagtgcagtggtgtgatcttggctcac-cgcaacctctgcctcccaggttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggcatgtgccaccatgcccagctaatttttttgtatttttaatagagacag i nomLeu3.chr10 I 361 C 0 s rheMac8.chr19 30239068 174 + 53671032 acatggagtcttgctctcttgcccaggctggagtgcagtggcgcgatcttggctcacttgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggactacaggcatgtgccaccatgcttagctaatgtttttgtatttttact-gagacaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34692846 174 + 59248254 acacggagtcttgctctcttgcccaggctggagtgcagtggcgcgatcttggctcacttgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggactacaggcatgtgccaccatgcttagctaatgtttttgtatttttact-gagacaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4561252 174 - 13342542 acacggagtcttgctctcttgcccaggctggagtgcagtggcgcgatcttggctcacttgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggactacaggcatgtgccaccatgcttagctaatgtttttgtatttttact-gagacaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5488053 174 + 7714307 acacggagtcttgctctcttgcccaggctggagtgcagtggcgcgatcttggctcacttgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggactacaggcatgtgccaccatgcttagctaatgtttttgtatttttact-gagacaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29293841 173 + 50890351 acacggagtcttgctctcttgcccaggctggagtgcagtgatgcgatcttggctcac-tgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggactacaggcatgtgccaccatgcttagctaatgtttttgtatttttact-gagacaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 922931 174 - 2385121 acacggagtcttgctctcttgcccaggctggagtgcagtggcgcgatcttggctcacttgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggactacaggcatgtgccaccatgcttagctaatgtttttgtatttttact-gagacaa i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 597748 0 + 2501019 C e micMur3.chr22 3983059 169 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508610 0 + 5549422 C e mm10.chr7 111123729 1256 - 145441459 I e canFam3.chr1 4639395 4 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e colAng1.NW_012111697v1 2365487 4188 + 4274983 T e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=1133355.000000 s hg38.chr19_GL383574v1_alt 103008 240 + 155864 ggt----ttcaccatgttggccaggctggtctcaaactcctgacaattgtgatctgcccacctcagcctcccagagtgctgggattacaggcatgagccaccgcacctggcctaatttttgtgttttttgtagagacagggttttaccatgttgcccaggctggtcttgaactagtgagctcaaacaatcctcccacctcggcctcccaaagtgctgggattataggcgtgagccacagcatct s panTro5.chr19 36170956 239 + 61309027 ggt----ttcaccatgttggccaggctggtctcaaactcctgaca-ttgtgatctgtccacctcagcctcccagagtgctgggattacaggcatgagccaccgcacctggcctaatttttgtgttttttgtagagacagggttttaccatgttgcccaggctggtcttgaactagtgagctcgaacaatcctcccaccttggcctcccaaagtgctgggattataggcgtgagccactgcatct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39915495 239 + 64411610 ggt----ttcaccatgttggccaggctggtctcaaactcctgaca-ttgtgatctgcccacctcagcctcccagagtgctgggattacaggcatgagccaccgcacctggcctaatttttgtgttttttgtagagacagggttttaccatgttgcccaggctggtcttgaactagtgagctcgaacaatcctcccaccttggcctcccaaagtgctgggattataggcgtgagccactgcatct i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63924378 239 - 106955855 ggtttcattcaccatgttggccaggctggtctcgaactcctgacc-ttgtgatctgcccacctcagcctcccaaagtgctgggattacaggcatgagctaccacacgcggcctaatttttgtattttttgtagaggcagggttttaccctgttgcccaggctggtcttgaactagtgagat----caatcctcccacctcagcctcccaaagtgctgggattataggcatgagccactgcatcg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30239242 239 + 53671032 ggt----ttcaccacattggccaggctggtctcaaacccctgacc-ttgtgatctgcccacctcagcctcccaaagtgctgggattataggtgtgagccaccacacccgccctaatttttgtattttttgtagagacagggttttaccacgttgcccaggccggtcttgaactagtgagcttgaacaatcctcccaccttggcctcccaaagtgctgggattacaggcgtgcaccactgcatct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693020 239 + 59248254 ggt----ttcaccacattggccaggctggtctcaaacccctgacc-ttgtgatctgcccacctcagcctcccaaagtgctgggattataggtgtgagccaccacacccgccctaatttttgtattttttgtagagacagggttttaccacgttgcccaggccggtcttgaactagtgagcttgaacaatcctcccaccttggcctcccaaagtgctgggattacaggcgtgcaccactgcatct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4561426 239 - 13342542 ggt----ttcaccacattggccaggctggtctcaaacccctgacc-ttgtgatctgcccacctcagcctcccaaagtgctgggattataggtgtgagccaccacatccgccctaatttttgtattttttgtagagacagggttttaccacgttgcccaggccggtcttgaactagtgagcttgaacaatcctcccaccttggcctcccaaagtgctgggattacaggcgtgcaccactgcatct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5488227 236 + 7714307 ggt----ttcaccacattggccaggctggtctcaaacccctgacc-ttgtgatctgcccacctcagcctcccaaagtgctgggattataggtgtgagccaccacacccgccctaatttttgtattttttgtagagacagggttttaccacgttgcccaggccggtcttgaactagtgagcttgaacaatcctcccaccttggcctcccaaagtgctgggattacaggcgtgcaccactgca--- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29294014 239 + 50890351 ggt----ttcatcacattggccaggctggtctcaaacccctgacc-ctgtgatctgcccacctcagcctcccaaagtgctgggattataggtgtgagccaccacacccgccctaatttttgtattttttgtagagacagggttttatcacgttgcccaggccggtcttgaactagtgagcttgaacaatcctcccaccttggcctcccaaagtgctgggattacaggcgtgcaccactgcatct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923105 239 - 2385121 ggt----ttcaccacattggccaggctggtttcaaacccctgacc-ttgtgatctgcccacctcagcctcccaaagtgctgggattataggtgtgagccaccacacccgccctaatttttgtattttttgtagagacagggttttaccacgttgcccaggccggtcttgaactagtgagcttgaacaatcctcccaccttggcctcccaaagtgctgggattacaggcgtgcaccactgcatct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2361299 239 + 4274983 GGT----TTCACCACGTTGGCCAGGCTGgtctcgaactcctgacc-ttgtgatctgcccacctcagcctcccaaagtgctgggattacaagtgtgagccaccacacccgccctaatttttgtattttttgtagagacagggttttaccatgttgcccaggctggtcttgaactagtgagctcgaacaatcctcccaccttggcctcccaaagtgctgggattacaggcgtgcaccactgcatct i colAng1.NW_012111697v1 T 4188 C 0 e proCoq1.NW_012149263v1 597748 0 + 2501019 C e micMur3.chr22 3983059 169 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508610 0 + 5549422 C e mm10.chr7 111123729 1256 - 145441459 I e canFam3.chr1 4639395 4 - 122678785 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=10900.000000 s hg38.chr19_GL383574v1_alt 103248 3 + 155864 -ggc s panTro5.chr19 36171195 3 + 61309027 -ggc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39915734 3 + 64411610 -ggc i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63924617 3 - 106955855 -ggc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30239481 3 + 53671032 -ggc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693259 3 + 59248254 -ggc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4561665 3 - 13342542 -ggc i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29294253 3 + 50890351 -ggc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923344 3 - 2385121 -ggc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2361538 3 + 4274983 -ggc i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4639399 3 - 122678785 GGG- i canFam3.chr1 I 4 C 0 e proCoq1.NW_012149263v1 597748 0 + 2501019 C e micMur3.chr22 3983059 169 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508610 0 + 5549422 C e mm10.chr7 111123729 1256 - 145441459 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e cerAty1.NW_012005268v1 5488463 0 + 7714307 C e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=78225.000000 s hg38.chr19_GL383574v1_alt 103251 13 + 155864 ctc-catctttttt s panTro5.chr19 36171198 13 + 61309027 ctc-catctttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39915737 13 + 64411610 ctc-catctttttt i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63924620 13 - 106955855 cTC-CATCTTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30239484 13 + 53671032 ctc-tatctttttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693262 13 + 59248254 ctc-tatctttttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4561668 13 - 13342542 ctc-tatctttttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5488463 12 + 7714307 -tc-tatctttttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29294256 14 + 50890351 ctcttatctttttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923347 13 - 2385121 ctc-tatctttttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2361541 13 + 4274983 cTC-CATCTTTTTT i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 597748 13 + 2501019 CTC-CATCTTTTTT i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4639402 13 - 122678785 CTC-CATTCTCTTT i canFam3.chr1 C 0 C 0 e micMur3.chr22 3983059 169 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508610 0 + 5549422 C e mm10.chr7 111123729 1256 - 145441459 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=516467.000000 s hg38.chr19_GL383574v1_alt 103264 83 + 155864 tctcAACACTTTGGTGCAA-GGAACTTGAAATAAAGAGGTGGCATGACATGACGAGTGCCTCAAACCTGTGTAGTGGGTACAT-----T s panTro5.chr19 36171211 83 + 61309027 tctcAATACTTTGGTGCAA-GGAACTTGAAATAAAGAGGTGGCATGACATGATGAGTGCCTCAAACCTGTGTAGTGGGTACAT-----T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39915750 83 + 64411610 tctCAATACTTTGGTGCAA-GGAACTTGAAATAAAGAGGTGGCATGACATGATGAGTGCCTCAAACCTGTGTAGTGGGTACAT-----T i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63924633 83 - 106955855 TCTCAACACTTTGGTGCAA-GGAACTTGGAATAAAGAGGTGGCATGACATGACGAGTGCCTCAAACCTGTGTAGTGGGTACAT-----T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30239497 88 + 53671032 tctCAACAGTTTGGTGCAA-GGAACGTGGAATAAAGAGGTGGCATGAGGTGACGAGTGCCTCAAACCTATGTGGTGGGTACATGGGTGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693275 88 + 59248254 tctcAACAGTTTGGTGCAA-GGAACGTGGAATAAAGAGGTGGCATGAGGTGACGAGTGCCTCAAACCTATGTGGTGGGTACATGGGTGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4561681 88 - 13342542 tctCAACAGTTTGGTGCAA-GGAACATGGAATAAAGAGGTGGCATGAGGTGACGAGTGCCtcaaacctatgtggtgggtacatgggtgt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5488475 88 + 7714307 tctcAACAGTTTGGTGCAA-GGAACGTGGAATAAAGAGGTGGCATGAGGTGACAAGTGCCTCAAACCTATGTGGTGGGTACGTGGGTGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29294270 88 + 50890351 tctcAACAGTTTGGTGCAA-GGAACGTGGAATAAAGAGGTGGCATGAGGTGACGAGTGCCtcaaacctatgtggtgggtacgtgggtgt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923360 88 - 2385121 tctCAACAGTTTGGTGCAA-GGAACATGGAATAAAGAGGTGGTATGAGGTGACGAGTGCCTCAAACCTATGTGGTGGGTACGTGGGTGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2361554 88 + 4274983 TCTCAACAGTTTGGTGCAA-GGAACTTGGAATAAAGAGGTGGCATGAGGTGACGAGTGCCTCAAGCCTATGTGGTGGGTACGTGGGTGT i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 597761 83 + 2501019 TCTTAGCACTTTGGTGCAA-AGAGCTTAGACTAAAGAGGTAGCATGAAGTGACAAATATCTCAAACCTACGTGGTCGGTACACG----- i proCoq1.NW_012149263v1 C 0 I 5 s otoGar3.GL873654 5508610 71 + 5549422 TCTCAGCACTTTGGTGCAA-AGGGCTTGAAATAAAGGGGTAACAGGAAATGACAAATGTCTCAAACCTATGT----------------- i otoGar3.GL873654 C 0 I 5 s canFam3.chr1 4639415 82 - 122678785 TCCTGGCACCTCTGTGCAAGGGAGCTTGGAACGAAGAGGTGACGGGACATGACAAAGGCCCCGGACCTGTGTGGTGCGTACA------- i canFam3.chr1 C 0 C 0 e micMur3.chr22 3983059 169 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e mm10.chr7 111123729 1256 - 145441459 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=702596.000000 s hg38.chr19_GL383574v1_alt 103347 105 + 155864 TTTTTCCCTCCTTCTCCATATGTATGTGTATTTGATGAATTAAA------ATAAATAATTTGAACCTGCAGGGCATGGGTATAATATCTGCAGATGGACTCACAAAACAGA s panTro5.chr19 36171294 105 + 61309027 TTTTTCCCTCCTTCTCCATATGTATGTGTATTTGATGAATTAAA------ATAAATAATTTGAACCTGCAGGGCATGGGTATAATATCTGCAGATGGACTCACAAAACAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39915833 105 + 64411610 TTTTTCCCTCCTTCTCCATATGTATGTGTATTTGATGAATTAAA------ATAAATAATTTGAACCTGCAGGGCATGGGTATAATATCTGCAGATGGACTCACAAAACAGA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63924716 105 - 106955855 TTTTTCCCTCCTTCTCCATATGTATGTGTATTTGATGAATCAAA------ATAAATAATTTGAACCTGCAGGGCATGGGTATAATATCTGCAGATGGACTCACAAAACAGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30239585 101 + 53671032 TTTTTCCCTCCTTCTCCA----TATGTATATTTGATGAATTAAA------ATAAATAATTCGAACTTGCAGGGCATGGGTGTAATATCCGCAGATGGATTCACAAAACAGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693363 101 + 59248254 TTTTTCCCTCCTTCTCCA----TATGTATATTTGATGAATTAAA------ATAAATAATTCGAACTTGCAGGGCATGGGTGTAATATCCGCAGATGGATTCACAAAACAGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4561769 101 - 13342542 tttttccctccttctcca----tatgtatatttgaTGAATTAAA------ATAAATAATTCGAACTTGCAGGGCATGGGTGTAATATCCGCAGATGGATTCACAAAACAGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5488563 101 + 7714307 TTTTTCCCTCCTTCTCCA----TATGTATATTTGATGAATTAAA------ATAAATAATTCGAACTTGCAGGGCATGGGTGTAATATCCGCAGATGGATTCACAAAACAGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29294358 101 + 50890351 tttttccctcattctcca----tatgtatatttgaCGAATTAAA------ATAAATAATTCAAACTTGCAGGGCATGGGTGTCATATCCGCAGATGGATTCACAAAACAGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923448 101 - 2385121 TTTTTCCCTCCTTCTCCA----TATGTATATTTGATGAATTAAA------ATAAATAATTCGAACTTGCAGGGCATGGGTGTAATATCCGCAGATGGATTCACAAAACAGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2361642 105 + 4274983 TTTTTCCCTCCTTCTCCAAATGTATGTGTATTTGATGAATTAAA------ATAAATAATTCGAACCTGCAGGGCATGGGTATAATATCTGCAGATGGATTCACAAAACAGA i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3983228 109 - 30143674 TTTTTCCCTCCTTCTCCATATATGTATGTGTTTGATGAATGAAAAGAAACATTAATAATTTGCACCTATGGGGCTTGAGTGTAATACCTGCAGATGGACT--CAAAACAAG i micMur3.chr22 I 169 C 0 s proCoq1.NW_012149263v1 597849 108 + 2501019 TTTTTCCCTCTTTCTCCATATATATGTGTGTTTGATGAATGAAAATAAATATTAATAATTTGCACCTATGGGGCCTGAGTATAATATCCGCAGATGGACT--CAAAAC-AG i proCoq1.NW_012149263v1 I 5 C 0 s otoGar3.GL873654 5508686 105 + 5549422 TTTTTCTCTCCTTGCCCATATGTATGTGTGTTTGGTGAATGAAA------ACCAATCATTTGAAACTGTGGGGCATAAGTATAATATCTGTAGTCAGACTCACAAAACAAA i otoGar3.GL873654 I 5 I 884 s canFam3.chr1 4639497 79 - 122678785 ----------------------TGGATGTGTTTGATGAAGGAGA------ACAAATCGTTCAAGGCTCCAGGACGTAGGTATGATAGCTGCAGGTGTGCT--CAAGCCC-- i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 373788 964 + 643850 M e mm10.chr7 111123729 1256 - 145441459 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=255047.000000 s hg38.chr19_GL383574v1_alt 103452 35 + 155864 AGGTGATATGTCCACAATACAAAATGCTCTCAGGT s panTro5.chr19 36171399 35 + 61309027 AGGTGATATGTCCACAATACAAAATGCTCTCAGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39915938 35 + 64411610 AGGTGATATGTCCACAATACAAAATGCTCTCAGGT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63924821 35 - 106955855 AGGTGATATGTCCACAATACAAAATGCTCTCAGGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30239686 35 + 53671032 AGGTGGTATGTCCACAATACAAAATGCTGTCAGGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693464 35 + 59248254 AGGTGGTATGTCCACAATACAAAATGCTGTCAGGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4561870 35 - 13342542 AGGTGGTATGTCCACAATACAAAATGCTGTCAGGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5488664 35 + 7714307 AGGTGGTATGTCCACAATACAAAATGCTGTCAGGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29294459 35 + 50890351 AGGTGGTATGTCCACAATACAAAATGCTCTCAGGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923549 35 - 2385121 AGGTGGTATGTCCACAATACAAAATGCTGTCAGGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2361747 35 + 4274983 AGGTGATATGTCCACAATACAAAATGCTCTCAGGT i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3983337 35 - 30143674 ACTTGATATGTCCACAATACAAAATGTTCTCAGGT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 597957 35 + 2501019 ACTTGATATGTCCACAATACAAAATGTTCTCAGGT i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4639576 35 - 122678785 ACTTGACAAGTGCACAATACCAAATGTCCTCAGGT i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5508791 884 + 5549422 I e mm10.chr7 111123729 1256 - 145441459 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=662673.000000 s hg38.chr19_GL383574v1_alt 103487 92 + 155864 AAGCTTGAGAGGTTCAAGGCCATCTGGT-CCCCAAAGCACCACAAAGGC----CACCAAAAG----GGCCCCAAGGTTGACAATGTTCACACTGATCTCAG----- s panTro5.chr19 36171434 92 + 61309027 AAGCTTGAGAGGTTCAAGGCCATCTGGT-CCCCAAAGCACCACAAAGGC----CACCAAAAG----GGCCCCAAGGTTGACAATGTTCACACTGATCTCAG----- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39915973 92 + 64411610 AAGCTTGAGAGGTTCAAGGCCATCTGGT-CCCCAAAGCACCACAAAGGC----CACCAAAAG----GGCCCCAGGGTTGACAATGTTCACACTGATCTCAG----- i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63924856 92 - 106955855 AAGCTTGAGAGGTTCAAGGCCGTCTGGT-CCCCAGAGCACCACAAAGGC----CACCAAAAG----GGCCCCAAGATTGACAATGTTCACACTGATCTCAG----- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30239721 92 + 53671032 AAGCTTGAGAGGTCCAGGGCCGTCTGCT-CCCCAGAGCACCACAAAGGC----CACCAAAAG----GGCCCCAAGGTTGTTAATGTTCACACGGATCTCAG----- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693499 92 + 59248254 AAGCTTGAGAGGTCCAGGGCCGTCTGCT-CCCCAGAGCACCACAAAGGC----CACCAAAAG----GGCCCCAAGGTTGTTAATGTTCACACGGATCTCAG----- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4561905 92 - 13342542 AAGCTTGAGAGGTCCAGGGCCGTCTGCT-CCCCAGAGCACCACAAAGGC----CACCAAAAG----GGCCCCAAGGTTGTTAATGTTCACACGGATCTCAG----- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5488699 92 + 7714307 AAGCTTGAGAGGTCCAGGGCCGTCTGCT-CCCCAGAGCACCACAAAGGC----CACCAAAAG----GGCCCCAAGGTTGTTAATGTTCACACGGATCTCAG----- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29294494 92 + 50890351 AAGCTTGAGAGGTCCAGGGCCGTCTGGT-CCTCAGAGCACCACAAAGGC----CACCAAAAG----GGCCTCAAGGTTGTTAATGTTCACACGGATCTCAG----- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923584 92 - 2385121 AAGCTTGAGAGGTCCAGGGCCGTCTGCT-CCCCAGAGCACCACAAAGGC----CACCAAAAG----GGCCCCAAGGTTGTTAATGTTCACACGGATCTCAG----- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2361782 92 + 4274983 AAGCTTGAGAGGTCCAAGGCCGTCTGGT-CCCCAGAGCACCACAAAGGC----CACTGAAAG----GGCCCCAAGATTGTTAATGTTCACACTGATCTCAG----- i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3983372 92 - 30143674 AAGCCTGAGAGATGCAACACAGTCTGGT-GCCCAGAATGCCACGGAGGC----TACCAAAGG----GACCCCAAGTTTGATAATGTTCACACTGAGCTCAG----- i micMur3.chr22 C 0 I 196 s proCoq1.NW_012149263v1 597992 96 + 2501019 AAGCCTGAGAGACCCAAGACAGTCTGGT-GCCCAGAACGCCACAGAGGC----CACCAAAGAGACCGACCCCAAGTTTGACAATGTTTACACTGAACTCAG----- i proCoq1.NW_012149263v1 C 0 I 59 s otoGar3.GL873654 5509675 96 + 5549422 AAGCTTTAGAGGTTCAAGACAATTTGAT-GTCCCAAATGTCAGAGGGGACTGGCACCTAAAG----AACCCTCCATTTGACAGTGTTCACACTTAACTCAA----- i otoGar3.GL873654 I 884 C 0 s canFam3.chr1 4639611 97 - 122678785 CAGCTTGAGAAGTCCAAGACGGCCTGGTAGCTCGGAGCGCCACAGAGGC----CAC-AGAAG----GGCCCCAAGGTTGACGAGGTTCACACTGAGCCCAAACAAG i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 373788 964 + 643850 M e mm10.chr7 111123729 1256 - 145441459 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=233871.000000 s hg38.chr19_GL383574v1_alt 103579 45 + 155864 AACTGCA--------------------------------------TATA------------------------------------TAGCTGAGTGGTTCTCCATGA-CTCCTGGCCCACG------------- s panTro5.chr19 36171526 45 + 61309027 AACTGCA--------------------------------------TATA------------------------------------TAGCTGAGTGGTTCTCCATGA-CTCCTGGCCCACG------------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916065 45 + 64411610 AACTGCA--------------------------------------TATA------------------------------------TAGCTGAGTGGTTCTCCATGA-CTCCTGGCCCACG------------- i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63924948 45 - 106955855 AACTGCA--------------------------------------TATA------------------------------------TAGCTGAGTGGTTCTCCATGA-CTCCTGGCCCACG------------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30239813 45 + 53671032 AACTGCA--------------------------------------TATA------------------------------------TAGCTGAGTGGTTCTCCAGGA-CTCCTGGCCCACG------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693591 45 + 59248254 AACTGCA--------------------------------------TATA------------------------------------TAGCTGAGTGGTTCTCCAGGA-CTCCTGGCCCACG------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4561997 45 - 13342542 AACTGCA--------------------------------------TATA------------------------------------TAGCTGAGTGGTTCTCCAGGA-CTCCTGGCCCACG------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5488791 45 + 7714307 AACTGCA--------------------------------------TATA------------------------------------TAGCTGAGTGGTTCTCCAGGA-CTCCTGGCCCACG------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29294586 45 + 50890351 AACTGCA--------------------------------------TATA------------------------------------TAGCTGGGTGGTTCTCCAGGA-CTCCTGGCCCACG------------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923676 45 - 2385121 AACTGCA--------------------------------------TATA------------------------------------TAGCTGAGTGGTTCTCCAGGA-CTCCTGGCCCACA------------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2361874 45 + 4274983 AACTGCA--------------------------------------TATA------------------------------------TAGCTGAGTGGTTCTCCAGGA-CTCCTGGCCCAGG------------- i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5509771 46 + 5549422 GACGGTG--------------------------------------TGTA------------------------------------TGACTGAGTGGGTCTCCAGGATTTCCTGGCCCTGG------------- i otoGar3.GL873654 C 0 I 13 s canFam3.chr1 4639708 133 - 122678785 AACTGCacgttgtgacccgaaactaacgtaacactgtgtgctaattatacttcaatgaaaaCAAAGAAAAGAAGCCCCGCCTGCCTGGCTGAACGGGTCTCCAGAACCTCCTGGTCCTGGATTGAGGCCTACA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 598088 59 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e mm10.chr7 111123729 1256 - 145441459 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=523633.000000 s hg38.chr19_GL383574v1_alt 103624 78 + 155864 GAAGGGGCCAAAATGGTG-TGAGCATAAGCGGTTTCTGGCACATTACTCTGGGGCCATGAGGTTCGGGGTAAAGTGAGC s panTro5.chr19 36171571 78 + 61309027 GAAGGGGCCAAAATGGTG-TGAGCATAAGCGGTTTCTGGCACATTACTCTGGGGCCATGAGGTTCGGGGTAAAGTGAGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916110 78 + 64411610 GAAGGGGCCAAAATGGTG-TGAGCATAAGCGGTTTCTGGCACATTACTCTGGGGCCATGAGGTTCGGGGTAAAGTGAGC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63924993 78 - 106955855 GAAGGGGCCAAAATGGTA-TGAGCATAAGCGGTTTCTGGCACATTACTCTGGGACCATGAGGTTTGGGGTAAAGTGAGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30239858 78 + 53671032 GAAGGGGCCAAAATGGTG-TGAGCATAAGCGGTTTCTGGCACATTACTCTGGAAACATGAGGTTTGGGGTAAAGTGAGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693636 78 + 59248254 GAAGGGGCCAAAATGGTG-TGAGCATAAGCGGTTTCTGGCACATTACTCTGGAAACATGAGGTTTGGGGTAAAGTGAGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4562042 78 - 13342542 GAAGGGGCCAAAATGGTG-TGAGCATAAGCGGTTTCTGGCACATTACTCTGGAAACATGAGGTTTGGGGTAAAGTGAGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5488836 78 + 7714307 GAAGGGGCCAAAATGGTG-TGAGCATAAGCGGTTTCTGGCACATTACTCTGGAAACATGAGGTTTGGGGTAAAGTGAGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29294631 78 + 50890351 GAAGGGGCCAAAATGGTG-TGAGCATAAGCGGTTTCTGGCACATTACTCTGGGACCATGAGGTTTGGGGTAAAGTGAGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923721 78 - 2385121 GAAGGGGCCAAAATGGTG-TGAGCATAAGCGGTTTCTGGCACATTACTCTGGAAACATGAGGTTTGGGGTAAAGTGAGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2361919 78 + 4274983 GAAGGGGCCAAAATGGTG-TGAGCATAAGCCGTTTCTGGCACATTACTCTGGGACCATGAGGTTTGGGGTAAAGTGAGC i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 598147 77 + 2501019 GAAGGGGCCCAAATGGCG-TGGGCAC-AGCAGTTTCCAGCACGTTATTCTGGGACCATGAGGTTTGGAGTGAAGTGAGC i proCoq1.NW_012149263v1 I 59 C 0 s otoGar3.GL873654 5509830 77 + 5549422 GAAAAGGCCCAAATGGTG-CAGGCAC-AGGAAGTTTCCTCACGATACTGTGGGACCACAAGGTCTGTAGTGAAGTAAGC i otoGar3.GL873654 I 13 I 21 s canFam3.chr1 4639841 79 - 122678785 GCAGGGGCCCAGCTGGAGCCGGGCGCAGGTCATTTCCAGCCCATCACTGTGGGACCCCAGGGTTTGGAGTGAAGTGAGC i canFam3.chr1 C 0 C 0 e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e mm10.chr7 111123729 1256 - 145441459 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=20090.000000 s hg38.chr19_GL383574v1_alt 103702 4 + 155864 CGCA s panTro5.chr19 36171649 4 + 61309027 CGCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916188 4 + 64411610 CGCA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925071 4 - 106955855 CGCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30239936 4 + 53671032 CACA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693714 4 + 59248254 CACA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4562120 4 - 13342542 CACA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5488914 4 + 7714307 CACA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29294709 4 + 50890351 CACA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923799 4 - 2385121 CACA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2361997 4 + 4274983 CACA i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 598224 4 + 2501019 AGCA i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4639920 4 - 122678785 AGCA i canFam3.chr1 C 0 C 0 e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5509907 21 + 5549422 I e mm10.chr7 111123729 1256 - 145441459 I e aotNan1.NW_018505377v1 387754 451 - 4471408 I e cebCap1.NW_016107633v1 1640710 462 - 2680843 I e saiBol1.JH378197 5431081 42 + 8899380 I e calJac3.chr22 28586617 1008 + 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=13600.000000 s hg38.chr19_GL383574v1_alt 103706 1 + 155864 G s panTro5.chr19 36171653 1 + 61309027 G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916192 1 + 64411610 G i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925075 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30239940 1 + 53671032 G i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693718 1 + 59248254 G i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4562124 1 - 13342542 G i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5488918 1 + 7714307 G i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29294713 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923803 1 - 2385121 G i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2362001 1 + 4274983 G i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 20558786 1 - 49145316 G i calJac3.chr22 n 1008 C 0 s saiBol1.JH378197 5431123 1 + 8899380 G i saiBol1.JH378197 I 42 C 0 s cebCap1.NW_016107633v1 1641172 1 - 2680843 G i cebCap1.NW_016107633v1 I 462 C 0 s aotNan1.NW_018505377v1 388205 1 - 4471408 G i aotNan1.NW_018505377v1 I 451 C 0 s proCoq1.NW_012149263v1 598228 1 + 2501019 G i proCoq1.NW_012149263v1 C 0 I 58 s canFam3.chr1 4639924 1 - 122678785 G i canFam3.chr1 C 0 I 58 e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 373788 964 + 643850 M e otoGar3.GL873654 5509907 21 + 5549422 I e mm10.chr7 111123729 1256 - 145441459 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=939632.000000 s hg38.chr19_GL383574v1_alt 103707 83 + 155864 CTTTTACATGTTAGTTTCAGTGGGAATGTCTGAAAGAAGAGCCTTCAGGAAAGGGGTTTTCATAGTCAAGTGCTCCTGGTGGT s panTro5.chr19 36171654 83 + 61309027 CTTTTACATGTTAGTTGCAGTGGGAATGTCTGAAAGAAGAGCCTTCAGGAAAGGGGTTTTCATAGTCAAGTGCTCCTGGTGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916193 83 + 64411610 CTTTTACATGTTAGTTGCAGTGGGAATGTCTGAAAGAAGAGCCTTCAGGAAAGGGGTTTTCATAGTCAAGTGCTCCTGGTGGT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925076 83 - 106955855 CTTTTACATGTTAGTTTCAGTGGGAGTGTCTGAAAGAAGAGACTTAAGGAAAGGGGTTTTCATAGCCAAGTGCTCCTGGTGGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30239941 82 + 53671032 CTTT-ACATGTTAGTTTCAGTGGGAATGTCTGAAAGAAGAGCCTTCAGGAAAGGGGTTTTCACAGCCAAGTGCTCTTGGTGGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693719 82 + 59248254 CTTT-ACATGTTAGTTTCAGTGGGAATGTCTGAAAGAAGAGCCTTCAGGAAAGGGGTTTTCACAGCCAAGTGCTCTTGGTGGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4562125 82 - 13342542 CTTT-ACATGTTAGTTTCAGTGGGAATGTCTGAAAGAAGAGCCTTCAGGAAAGGGGTTTTCACAGCCAAGTGCTCTTGGTGGT i macNem1.NW_012011689v1 C 0 I 992 s cerAty1.NW_012005268v1 5488919 81 + 7714307 CTTT-ACATGTTAGTTTCAGTGGGAATGTCTGAAAGAAGAGCCTTCAGGAAA-GGGTTTTCACAGCCAAGTGCTCTTGGTGGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29294714 82 + 50890351 CTTT-ACATGTTAGTTTCAGTGGGAATGTTTGAAGGAAGAGCCTTCAGGAAAGGGGTTTTCACAGCCAAGTGTTCTTGGTGGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923804 82 - 2385121 CTTT-ACATGTTAGTTTCAGTGGGAATGTCTGAAAGAAGAGCCTTCAGGAAAGGGGTTTTCACAGCCAAGTGCTCTTGGTGGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2362002 81 + 4274983 CTTT--CACGTTAGTTTCAGTGGGAATGTCTGAAAGAAGAGCCTTCAGGAAAGGGGTTTTCACAGCCAAGTGCTCTTGGTGGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 20558787 83 - 49145316 CTTTTCCATGTTAGTTTCAGTGGAAATGTCTGAAAGAAGAGCCTTCAAAAAAGAGGTTTTCACAGCCAAGTGTTCTTGGTGGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5431124 83 + 8899380 CTTTTACATGTTAGTTTCAGTGGGAATGTCTAAAAGAAGAACCTTCAGGAAAGGGGTTTTCATAGCCAAGTGTTCTTGGTGGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1641173 83 - 2680843 CTTTTACATGTTAGTTTCAGTGCGAATGTCTAAAAGAAGAACCTTCAGGAAAGGGGTTTTCATAGCCAAGTGTTCTTGGTGGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 388206 83 - 4471408 CTTTTACATGTTAGTTTCAGTGGGAATGTCTAAAAGAAGAACCTTCAGGAAAGGGGTTTTCACAGCCAAGTGTTCTTGGTGGT i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 34318075 83 + 145441459 CTCTTCCATGTTAGTTTTAGTGGGAACATCTGAAAGAAAAACCTTCAGGGAAGGAGTTTTCACAGCCAAGTCTTCTTGGTGGG i mm10.chr7 n 1256 I 1 s canFam3.chr1 118039948 76 + 122678785 CTTTTCCAC---AGGTTTAGTGGGCATGTCTGAAAGAAGAGCCTTCGGGGGAGAGGTTGTCACAGCCAAGG----TTGGGGGG i canFam3.chr1 T 8237 I 4 s dasNov3.JH563638 270244 83 - 643850 CTTTTACATCTTAGTTTTAATGGGAATGTCTGAAAGAAGAGCCTTTGAGGGAGGGTTTTACTCAGCCTAATTTTCAtggtggt i dasNov3.JH563638 n 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e otoGar3.GL873654 5509907 21 + 5549422 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=143576.000000 s hg38.chr19_GL383574v1_alt 103790 14 + 155864 AGAGTGGGCAATGG s panTro5.chr19 36171737 14 + 61309027 AGAGTGGGCAATGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916276 14 + 64411610 AGAGTGGGCAATGG i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925159 14 - 106955855 AGAGGGGGCAATGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30240023 14 + 53671032 GGAGGGGGCAATGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693801 14 + 59248254 GGAGGGGGCAATGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 8782935 14 + 13342542 GGAGGGGGTACTGG i macNem1.NW_012011689v1 n 992 C 0 s cerAty1.NW_012005268v1 5489000 14 + 7714307 GGAGGGGGCAATGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29294796 14 + 50890351 GGAGGGGGCAATGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923886 14 - 2385121 GGAGGGGGCAATGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2362083 14 + 4274983 GGAGGGGGCAATGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 20558870 14 - 49145316 GGAGGGAGCAATGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5431207 14 + 8899380 GGAGGGGGCATTGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1641256 14 - 2680843 GGAGGGGGCATTGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 388289 14 - 4471408 GGAGGGGGCATTGG i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 34318159 14 + 145441459 CTGGGGAGCAGTGG i mm10.chr7 I 1 C 0 s canFam3.chr1 118040028 14 + 122678785 GGCAGGGGCAGTGG i canFam3.chr1 I 4 C 0 s dasNov3.JH563638 270327 14 - 643850 ggtggtggtggtgg i dasNov3.JH563638 C 0 I 31 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e otoGar3.GL873654 5509907 21 + 5549422 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=139023.000000 s hg38.chr19_GL383574v1_alt 103804 16 + 155864 GGTT-GTTTGCAGAGAG s panTro5.chr19 36171751 16 + 61309027 GGTT-GTTTGCAGAGAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916290 16 + 64411610 GGTT-GTTTGCAGAGAG i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925173 16 - 106955855 GGTT-GTTTGCAGAGAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30240037 16 + 53671032 GGTT-GTTTGCAGACAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693815 16 + 59248254 GGTT-GTTTGCAGACAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 8782949 14 + 13342542 GGTT-GTTTGCAG--AG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5489014 16 + 7714307 GGTT-GTTTGCCGAGAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29294810 16 + 50890351 GGTT-GTTTGCAGACAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923900 16 - 2385121 GGTT-GCTTGCCGAAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2362097 16 + 4274983 GGTT-GTTTGCAGAGAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 20558884 16 - 49145316 GGTT-GTTTGCAGAGAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5431221 16 + 8899380 GGTT-GTTTGCTGAGAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1641270 16 - 2680843 GGTT-GTTTGCTGAGAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 388303 16 - 4471408 GGTT-GTTTGCTGAGAG i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 34318173 17 + 145441459 AGTGAATCTGGAGAGGG i mm10.chr7 C 0 I 5 s canFam3.chr1 118040042 17 + 122678785 GGTTGGTCTGGAGAGAG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270341 31 - 643850 I e otoGar3.GL873654 5509907 21 + 5549422 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=28427.000000 s hg38.chr19_GL383574v1_alt 103820 4 + 155864 TCAC s panTro5.chr19 36171767 4 + 61309027 TCAC i panTro5.chr19 C 0 I 3 s panPan2.chr19 39916306 4 + 64411610 TCAC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925189 4 - 106955855 TCAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30240053 4 + 53671032 TCAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693831 4 + 59248254 TCAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 8782963 4 + 13342542 TCAt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5489030 4 + 7714307 TCAC i cerAty1.NW_012005268v1 C 0 I 2288 s chlSab2.chr6 29294826 4 + 50890351 TCAC i chlSab2.chr6 C 0 I 305 s manLeu1.NW_012102454v1 923916 4 - 2385121 TCAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2362113 4 + 4274983 TCAC i colAng1.NW_012111697v1 C 0 I 7377 s calJac3.chr22 20558900 4 - 49145316 TAAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5431237 4 + 8899380 TAAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1641286 4 - 2680843 TAAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 388319 4 - 4471408 TAAC i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 118040059 3 + 122678785 -TGC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270341 31 - 643850 I e otoGar3.GL873654 5509907 21 + 5549422 I e mm10.chr7 34318190 5 + 145441459 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=78808.000000 s hg38.chr19_GL383574v1_alt 103824 12 + 155864 ttt-----ttttttttt s panTro5.chr19 36171774 12 + 61309027 ttt-----ttttttttt i panTro5.chr19 I 3 C 0 s panPan2.chr19 39916310 12 + 64411610 ttt-----ttttttttt i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925193 6 - 106955855 -----------tttttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30240057 12 + 53671032 ttt-----ttttttttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693835 12 + 59248254 Att-----ttttttttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 8782967 12 + 13342542 ttt-----ttttttttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5491322 12 + 7714307 ttt-----ttttttttt i cerAty1.NW_012005268v1 I 2288 C 0 s chlSab2.chr6 29295135 12 + 50890351 ttt-----ttttttttc i chlSab2.chr6 I 305 C 0 s manLeu1.NW_012102454v1 923920 12 - 2385121 ttt-----ttttttttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2369494 12 + 4274983 ttt-----ttttttttt i colAng1.NW_012111697v1 I 7377 C 0 s calJac3.chr22 20558904 15 - 49145316 ttt--tttttttttttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5431241 17 + 8899380 ttttgttgttgtttttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1641290 12 - 2680843 ttt-----tgttttttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 388323 12 - 4471408 ttt-----tgttttttt i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 118040062 12 + 122678785 TTT-----TCCTCCTCT i canFam3.chr1 C 0 I 30 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270341 31 - 643850 I e otoGar3.GL873654 5509907 21 + 5549422 I e mm10.chr7 34318190 5 + 145441459 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=9555.000000 s hg38.chr19_GL383574v1_alt 103836 1 + 155864 t s panTro5.chr19 36171786 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916322 1 + 64411610 t i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925199 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30240069 1 + 53671032 t i rheMac8.chr19 C 0 I 838 s macFas5.chr19 34693847 1 + 59248254 t i macFas5.chr19 C 0 I 4 s macNem1.NW_012011689v1 8782979 1 + 13342542 t i macNem1.NW_012011689v1 C 0 I 3 s cerAty1.NW_012005268v1 5491334 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295147 1 + 50890351 t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923932 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2369506 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 20558919 1 - 49145316 t i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5431258 1 + 8899380 t i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1641302 1 - 2680843 t i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 388335 1 - 4471408 t i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270341 31 - 643850 I e otoGar3.GL873654 5509907 21 + 5549422 I e mm10.chr7 34318190 5 + 145441459 I e canFam3.chr1 118040074 30 + 122678785 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=3131.000000 s hg38.chr19_GL383574v1_alt 103837 1 + 155864 t s panTro5.chr19 36171787 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916323 1 + 64411610 t i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925200 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 23433727 1 - 53671032 a i rheMac8.chr19 n 838 C 0 s macFas5.chr19 34693852 1 + 59248254 t i macFas5.chr19 I 4 C 0 s cerAty1.NW_012005268v1 5491335 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295148 1 + 50890351 t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 923933 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 M 650 s colAng1.NW_012111697v1 2369507 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 20558920 1 - 49145316 g i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5431259 1 + 8899380 t i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1641303 1 - 2680843 t i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 388336 1 - 4471408 t i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270341 31 - 643850 I e otoGar3.GL873654 5509907 21 + 5549422 I e mm10.chr7 34318190 5 + 145441459 I e canFam3.chr1 118040074 30 + 122678785 I e macNem1.NW_012011689v1 8782980 3 + 13342542 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=697745.000000 s hg38.chr19_GL383574v1_alt 103838 101 + 155864 g-agacagga-tctcactctgttcccca-gcaggagtgcagtggcacaatcatagctcacagcagccttgaactgccgggctcaagtcatcctcctccctcagc s panTro5.chr19 36171788 101 + 61309027 g-agacagga-tctcactctgttcccca-gcaggagtgcagtggcacaatcatagctcacagcagccttgaactgccaggctcaagtcatcctcctccctcagc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916324 102 + 64411610 gtagacagga-tctcactctgttcccca-gcaggagtgcagtggcacaatcatagctcacagcagccttgaactgccaggctcaagtcatcctcctccctcagc i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925201 101 - 106955855 g-agacagga-tcccactctgttcccca-gcaggcatgcagtggcacaatcatagctcacagcagccttggactgccgggctcaagtcatcctcctgcctcaac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 23433728 101 - 53671032 -aagacaggg-tctcattgtgttgtcca-gcaggagcgcagtggcacaatcatagctcacagtagccttgaactgctgggctcaagcaatcctcctgtctcagc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693853 102 + 59248254 -aagatggag-tctcactctgtctcccaggctggagtgcagtggcgcaaccttggctcactgcaagctccgcctcccgggttcatgccattctcccgcatcagc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 8782983 101 + 13342542 -aagacaggg-tctcattgtgttgtcca-gcaggagtgcagtggcacaatcatagctcacagtagccttgaactgctgggctcaagcaatcctcctgtctcagc i macNem1.NW_012011689v1 I 3 C 0 s cerAty1.NW_012005268v1 5491336 96 + 7714307 -gagacaggg-tctcactctgttcccca-gcaggagtgcagtggcacaa-----gctcacagcagccttgaactgccggcctcaagtcatcctcctgcctcagc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295149 101 + 50890351 -gagacaggg-tctcactctgttcccca-gcaggagtgcagtggcacaaccatagctcacagcagccttgaactgccggcctcaagtcatcctcctgcctcagc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 1463887 101 + 2385121 -aagacaggg-tctcattgtgttgtcca-gcaggagtgcagtggcacaatcatagctcacagtagccttgaactgctgggctcaagcaatcctcctgtctcagc i manLeu1.NW_012102454v1 n 0 n 0 s colAng1.NW_012111697v1 2369508 101 + 4274983 -gagacaggg-cctcactctgttcccca-gcaggagtgcagtggcacaaccatagctcacagcagccttaaactgctggcctcaagtcatcctcctgcctcagc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 20558921 100 - 49145316 -gaaacagag-tctcactctgtcatcag-gctgaagtgcagtagcgcgatcttggctcactgcaccctccgtctcccgagttcaagcaattct-ctgcctcagc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5431260 101 + 8899380 -cagacaggg-ttttactctgttgccca-gcaggagtgcagtggcacaatcgtatctcactgcagtcttgaacttgtgggctcaagtgatcctcctacctcaac i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1641304 101 - 2680843 -gagacaggg-ttttactctgttgccca-gcaggagtgcagtggcacaatcatatctcactgcagtcttgaacttgtaggctcaagtgatcctcctacctcagc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 388337 102 - 4471408 -gaaacaaggtttttactctgttgccca-gcaggagtgcagtggcacaatcatatctcactgcagtcttgaacttgtaggctcaagtgatcctcctacctcacc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270341 31 - 643850 I e otoGar3.GL873654 5509907 21 + 5549422 I e mm10.chr7 34318190 5 + 145441459 I e canFam3.chr1 118040074 30 + 122678785 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=555053.000000 s hg38.chr19_GL383574v1_alt 103939 70 + 155864 ctccccagtaactgggactacaagtgggcgccaccatgcccagctaatttttgaaattttttgtagagct s panTro5.chr19 36171889 70 + 61309027 ctccccagtaactgggactacaagtgggcgccaccatgcccagctaatttttgaaattttttgtagagct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916426 70 + 64411610 ctccccagtaactgggactacaagtgggcgccaccatgcccagctaatttttgaaattttttgtagagct i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925302 70 - 106955855 ctccccagtaactgggactacaagtgggcgccaccatgcccagctaatttttgaaattttttgtagagat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 23433829 70 - 53671032 ctccccagtaactgggactacaagtgggtgccaccatgactagataatttttgaaatgttttgtagagat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34693955 70 + 59248254 ctcccaagtaactgggactataggcacctgccaccatgcccagctaattttttgtatttttagtagagat i macFas5.chr19 C 0 I 774 s macNem1.NW_012011689v1 8783084 70 + 13342542 ctccccagtaactgggactacaagtgggtgccaccatgactagctaatttttgaaatgttttgtagagat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5491432 70 + 7714307 ctccccagtaactgggactacaagtgggggccaccatgcccagctaatttttgaaattttttgtagagat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295250 70 + 50890351 ctccccagtaactgggactacaagtgggggccagcatgcccagctaatttttgaaaaattttgtagagat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924588 70 - 2385121 ctccccagtaactgggactacaagtgggggccaccatgcccagctaatttttgaaattttttgtagagat i manLeu1.NW_012102454v1 M 650 C 0 s colAng1.NW_012111697v1 2369609 70 + 4274983 ctccccagtaactgggactacaagtgggggccaccatgcccagctaatttttgaaattttttgtagagat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 20559021 70 - 49145316 ctccttagtagcagggactacaggcgcttgccaacacacccggctaattttttgtatttttagtagagat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5431361 70 + 8899380 ctccccagtaactgggactacaagtgggcaccactatgcccaactaatttttcagattttttgtagagat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1641405 70 - 2680843 ctccccagtaactgggactacaagtgggcaccactatgcccagctaatttttcagattttttgttgagat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 388439 69 - 4471408 ctccccagtaactgggactttaagtgggcacc-ctatgcccagctaatttttcaaactttttgtagagat i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270341 31 - 643850 I e otoGar3.GL873654 5509907 21 + 5549422 I e mm10.chr7 34318190 5 + 145441459 I e canFam3.chr1 118040074 30 + 122678785 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=367950.000000 s hg38.chr19_GL383574v1_alt 104009 47 + 155864 ggagtctcactttgttgcccaggttggtcttcaactcctagcctcaa s panTro5.chr19 36171959 47 + 61309027 ggagtctcactttgttgcccaggttggtcttcaactcctagcctcaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916496 47 + 64411610 ggagtctcactttgttgcccaggttggtcttcaactcctagcctcaa i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925372 47 - 106955855 ggagtctcactttgttgcccaggttggtcttcaactcctagcctcag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 23433899 47 - 53671032 ggagtctcactttgttgcccaggttggtcttcaactcctagcctcag i rheMac8.chr19 C 0 n 0 s macFas5.chr19 34694799 45 + 59248254 ggggtttcaccgtgttagccaggatggtctcgatctactgacctc-- i macFas5.chr19 I 774 C 0 s macNem1.NW_012011689v1 8783154 47 + 13342542 ggagtctcactttgttgcccaggttggtcttcaactcctagcctcag i macNem1.NW_012011689v1 C 0 n 0 s cerAty1.NW_012005268v1 5491502 47 + 7714307 ggattctcactttgttgcccaggttgatcttcaactcctagcctcaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295320 47 + 50890351 ggattctcactttgttgcccaggttgatcttcaactcctagcctcaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924658 47 - 2385121 ggattctcactttgttgcccaggttgatcttcaactcctagcctcaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2369679 47 + 4274983 ggagtcccactttgttgcccaggttgatcttcaactcctagcctcaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 20559091 45 - 49145316 gggttttcaccgtgctggctaggatggttttgatctcctgacctc-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5431431 47 + 8899380 ggagtcccactttgttgctcaggttggtcttcaactcctagcctcaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1641475 47 - 2680843 ggagtcccactttgttgctcaggttggtcttcaactcctagcctcaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 388508 47 - 4471408 ggagtcccactttgttgcttaggttggtcttcaactcctagcctcaa i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270341 31 - 643850 I e otoGar3.GL873654 5509907 21 + 5549422 I e mm10.chr7 34318190 5 + 145441459 I e canFam3.chr1 118040074 30 + 122678785 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=399498.000000 s hg38.chr19_GL383574v1_alt 104056 48 + 155864 gtgatcctctcacctcagcctcccaaagtgctggaattacaagtgtga s panTro5.chr19 36172006 48 + 61309027 gtgatcctctcacctcagcctcccaaagtgctggaattacaagtgtga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916543 48 + 64411610 gtgatcctctcacctcagcctcccaaagtgctggaattacaagtgtga i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925419 48 - 106955855 gtgatcctctcacatcagcctcccaaagtgctggaattacaaatgtga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30240908 48 + 53671032 gtgatccgcccgcctcggcctcccaaagtgcagggattacaggcgtga i rheMac8.chr19 I 838 C 0 s macFas5.chr19 34694844 48 + 59248254 gtgatccgcccgcctcggcctcccaaagtgcagggattacaggcgtga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563199 48 - 13342542 gtgatccgcccgcctcggcctcccaaagtgcagggattacaggcgtga i macNem1.NW_012011689v1 I 992 C 0 s cerAty1.NW_012005268v1 5491549 48 + 7714307 gtgatcctcccacctcagcctcccaaagtgctggaattacaagtgtga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295367 48 + 50890351 gtgatcctcccacctcagcctcccaaagtgctggaattacaagtgtga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924705 48 - 2385121 gtgatcctcccacctcagcctcccaaagtgctggaattacaagtgtga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2369726 48 + 4274983 gtgatcctcccaccgcagcctcccaaagtgctggaattacaagtgtga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 20559136 48 - 49145316 gtgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtga i calJac3.chr22 C 0 n 0 s saiBol1.JH378197 5431478 48 + 8899380 gtgaccctcccaacttagcctcccaaaatgctggaattacaagtgtaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1641522 48 - 2680843 gtgaccctcccaactcagcctcccaaaatgctggaattacgagtgtaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 388555 48 - 4471408 gtgaccctcccaactcagcctcccaaaatgctggaattacaagtgtaa i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270341 31 - 643850 I e otoGar3.GL873654 5509907 21 + 5549422 I e mm10.chr7 34318190 5 + 145441459 I e canFam3.chr1 118040074 30 + 122678785 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=38141.000000 s hg38.chr19_GL383574v1_alt 104104 5 + 155864 gtcac s panTro5.chr19 36172054 5 + 61309027 gtcac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916591 5 + 64411610 gtcac i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925467 5 - 106955855 gtcac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30240956 5 + 53671032 gccac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34694892 5 + 59248254 gccac i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563247 5 - 13342542 gccac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5491597 5 + 7714307 gtcac i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295415 5 + 50890351 gtcac i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924753 5 - 2385121 gtcac i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2369774 5 + 4274983 gtcac i colAng1.NW_012111697v1 C 0 I 85 s saiBol1.JH378197 5431526 5 + 8899380 gccac i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1641570 5 - 2680843 gccac i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 388603 5 - 4471408 gccac i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270341 31 - 643850 I e otoGar3.GL873654 5509907 21 + 5549422 I e mm10.chr7 34318190 5 + 145441459 I e canFam3.chr1 118040074 30 + 122678785 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=3843.000000 s hg38.chr19_GL383574v1_alt 104109 1 + 155864 c s panTro5.chr19 36172059 1 + 61309027 c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916596 1 + 64411610 c i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925472 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30240961 1 + 53671032 c i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34694897 1 + 59248254 c i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563252 1 - 13342542 c i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5491602 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295420 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924758 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 C 0 s saiBol1.JH378197 5431531 1 + 8899380 c i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1641575 1 - 2680843 c i cebCap1.NW_016107633v1 C 0 I 717 s aotNan1.NW_018505377v1 388608 1 - 4471408 c i aotNan1.NW_018505377v1 C 0 I 170 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270341 31 - 643850 I e otoGar3.GL873654 5509907 21 + 5549422 I e mm10.chr7 34318190 5 + 145441459 I e canFam3.chr1 118040074 30 + 122678785 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2369779 85 + 4274983 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=10625.000000 s hg38.chr19_GL383574v1_alt 104110 3 + 155864 gca s panTro5.chr19 36172060 3 + 61309027 gca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916597 3 + 64411610 gca i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925473 3 - 106955855 gca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30240962 3 + 53671032 gcg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34694898 3 + 59248254 gcg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563253 3 - 13342542 gcg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5491603 3 + 7714307 gca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295421 2 + 50890351 -CA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924759 3 - 2385121 gca i manLeu1.NW_012102454v1 C 0 C 0 s saiBol1.JH378197 5431532 3 + 8899380 aca i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270341 31 - 643850 I e otoGar3.GL873654 5509907 21 + 5549422 I e mm10.chr7 34318190 5 + 145441459 I e canFam3.chr1 118040074 30 + 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2369779 85 + 4274983 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=52748.000000 s hg38.chr19_GL383574v1_alt 104113 11 + 155864 ctcCCCTGGGA s panTro5.chr19 36172063 11 + 61309027 ccccgcTGGGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916600 11 + 64411610 ccccgcTGGGA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925476 11 - 106955855 cccCACTGGGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30240965 11 + 53671032 cccggccGGGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34694901 11 + 59248254 cccggcTGGGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563256 11 - 13342542 cccggccGGGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5491606 11 + 7714307 ccccgcTGGGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295423 11 + 50890351 CCCCGCTGGGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924762 11 - 2385121 ccccgcTGGGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2369864 11 + 4274983 CCCTGCTGGGA i colAng1.NW_012111697v1 I 85 C 0 s saiBol1.JH378197 5431535 11 + 8899380 tccCACTGAGA i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270341 31 - 643850 I e otoGar3.GL873654 5509907 21 + 5549422 I e mm10.chr7 34318190 5 + 145441459 I e canFam3.chr1 118040074 30 + 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=53566.000000 s hg38.chr19_GL383574v1_alt 104124 12 + 155864 GCAAATTTTAGC s panTro5.chr19 36172074 12 + 61309027 GCAAATTTTAGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916611 12 + 64411610 GCAAATTTTAGC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925487 12 - 106955855 GTAAATTTTAGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30240976 12 + 53671032 GTAAATTTTAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34694912 12 + 59248254 GTAAATTTTAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563267 12 - 13342542 GTAAATTTTAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5491617 12 + 7714307 GTAAATTTTAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295434 12 + 50890351 GTAAATTTTAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924773 12 - 2385121 GTAAATTTTAAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2369875 12 + 4274983 GTAAATTTTAAC i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5431546 8 + 8899380 GTGACTTC---- i saiBol1.JH378197 C 0 C 0 s dasNov3.JH563638 270372 12 - 643850 GTAGATACTTTC i dasNov3.JH563638 I 31 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e otoGar3.GL873654 5509907 21 + 5549422 I e mm10.chr7 34318190 5 + 145441459 I e canFam3.chr1 118040074 30 + 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=63225.000000 s hg38.chr19_GL383574v1_alt 104136 12 + 155864 TTTCCTGGTCTC s panTro5.chr19 36172086 12 + 61309027 CTTCCTGGTCTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916623 12 + 64411610 CTTCCTGGTCTC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925499 12 - 106955855 CTTCCTGGTCTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30240988 12 + 53671032 CTTAATGGTCTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34694924 12 + 59248254 CTTCTTGGTCTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563279 12 - 13342542 CTTCTTGGTCTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5491629 12 + 7714307 CTTCTTGGTCTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295446 12 + 50890351 CTTCTTGGTCTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924785 12 - 2385121 CTTCTTGGTCTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2369887 12 + 4274983 TGTCTTGGTCTC i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5431554 10 + 8899380 --TCTCTCTCTC i saiBol1.JH378197 C 0 C 0 s mm10.chr7 34318195 12 + 145441459 TTTTGGGGGCTC i mm10.chr7 I 5 C 0 s dasNov3.JH563638 270384 12 - 643850 CTTACTGGTCTG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e otoGar3.GL873654 5509907 21 + 5549422 I e canFam3.chr1 118040074 30 + 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=33572.000000 s hg38.chr19_GL383574v1_alt 104148 4 + 155864 CCTT s panTro5.chr19 36172098 4 + 61309027 CCTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916635 4 + 64411610 CCTT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925511 4 - 106955855 CCTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241000 4 + 53671032 CCTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34694936 4 + 59248254 CCTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563291 4 - 13342542 CCTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5491641 4 + 7714307 CCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295458 4 + 50890351 CCTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924797 4 - 2385121 CCTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2369899 4 + 4274983 CCTT i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5431564 4 + 8899380 TCtt i saiBol1.JH378197 C 0 I 120 s mm10.chr7 34318207 4 + 145441459 CCTT i mm10.chr7 C 0 C 0 s canFam3.chr1 118040104 4 + 122678785 CCCA i canFam3.chr1 I 30 C 0 s dasNov3.JH563638 270396 4 - 643850 CCTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e otoGar3.GL873654 5509907 21 + 5549422 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=721271.000000 s hg38.chr19_GL383574v1_alt 104152 111 + 155864 GTGCAGGATGTGAAAGCTGTGAGATAGGCTGTAAG----CCCCAGGAAGGGTAGCTGCATTCC-AGAGTCTGCAGGATTTGGGAACAGGCGTGGACATGGCTGGCCAGAC-------ACACGT s panTro5.chr19 36172102 111 + 61309027 GTGCAGGATGTGAAAGCTGTGAGATAGGCTGTAAG----CCCCAGGAAGGGTAGCTGCATTCC-AGAGTCTGCAGGATTTGGGAACAGGCGTGGACATGGCTGGCCAGAC-------ACACGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916639 111 + 64411610 GTGCAGGATGTGAAAGCTGTGAGATAGGCTGTAAG----CCCCAGGAAGGGTAGCTGCATTCC-AGAGTCTGCAGGATTTGGGAACAGGCGTGGACATGGCTGGCCAGAC-------ACACGT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925515 111 - 106955855 GGGCAGGATGTGAAAGCTGTGAGATAGGCTGTAAG----CCCCAGGAAGGGTAGCTGCATTCC-ACAGTCCGCAGGATTTGGGAACAGGCCTGGAGATGGCTGGCCAGAT-------ACATGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241004 110 + 53671032 -GGGAGGATGTGAAAGCTGTGAGATAGGCTGTAAG----CCCCAGGAAGGGTAGCTGCATTCC-AGAGTCCGCAGGATTTGGGAACAGGTCTGGAGACGGCTGGCCAGAC-------ACACGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34694940 110 + 59248254 -GGCAGGATGTGAAAGCTGTGAGATAGGCTGTAAG----CCCCAGGAAGGGTAGCTGCATTCC-AGAGTCCGCAGGATTTGGGAACAGGTCTGGAGACGGCTGGCCAGAC-------ACACGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563295 110 - 13342542 -GGCAGGATGTGAAAGCTGTGAGATAGGCTGTAAG----CCCCAGGAAGGGTAGCTGCATTCC-AGAGTCCGCAGGATTTGGGAACAGGTCTGGAGACGGCTGGCCAGAC-------ACACGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5491645 111 + 7714307 GGGCAGGATGTGAAAGCTGTGAGATAGGCTGTAAG----CCCCAGGAAGGGTAGCTGCATTCC-AGAGTCCACAGGATTTGGGAACAGGTCTGGAGACGGCTGGCCAGAC-------ACACGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295462 111 + 50890351 GGGCAGGATGTGAAAGCTGTGAGATAGGCTGTAAG----CCCCAGGAAGGGTAGCTGCATTCC-AGAGTCCGCAGGATTTGGGAACAGGTCTGGAGATGGCTGGCCAGAC-------ACACGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924801 111 - 2385121 GGGCAGGATGTGAAAGCTGTGAGATAGGCTGTAAG----CCCCAGGAAGGGTAGCTGCATTCC-AGAGTCCGCAGGATTTGGGAACAGGTCTGGAGACGGCTGGCCAGAC-------ACACGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2369903 109 + 4274983 GGGCAGGATGTGAAAGC--TGAGATAGGCTGTAAG----CCCCAGGAAGGGTAGCTGCATTCC-AGAGTCCGCAGGATTAGGGAACAGGTCTGGGGATGGCTGGCCAGAC-------ACACGT i colAng1.NW_012111697v1 C 0 C 0 s mm10.chr7 34318211 114 + 145441459 GGGCAGGATGTGAACATGGCAGGATGGGCTGCAAGCTCCCTCCCGGGTGGGTTGCTGCATTCC-AGAGACCACAGGATTTGGGAGCTGGTCTGGAGGGAGCCGGCCAGAC-------ATTCT- i mm10.chr7 C 0 C 0 s canFam3.chr1 118040108 109 + 122678785 GGGCAGAGTGTGAAC----TGCTGCAAACCATGAG----CCCCAGGAAGGGTAGCTGCGTTCC-AGAATCCCCAGGATT----GCCGAGTCTGGAGAGGGCTGGCCAGACGTTCTGGACACG- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 270400 110 - 643850 GGGCAGGATGGGAAAGCTGCGAGAT-GCCTGTGAG----CTCCAGGAAAGGTGGCTGCATTCCAAGAGTCAGCAGGACTTGGGAGTGAGTCTGGAGAGGGCTGGCCAGAC-------ATTCT- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e otoGar3.GL873654 5509907 21 + 5549422 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=42511.000000 s hg38.chr19_GL383574v1_alt 104263 5 + 155864 GGGCA s panTro5.chr19 36172213 5 + 61309027 GGGCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916750 5 + 64411610 GGGCA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925626 5 - 106955855 GGGCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241114 5 + 53671032 GGGCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695050 5 + 59248254 GGGCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563405 5 - 13342542 GGGCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5491756 5 + 7714307 GGGCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295573 5 + 50890351 AGGCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924912 5 - 2385121 GGGCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370012 5 + 4274983 GGACA i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5509928 5 + 5549422 GGGTG i otoGar3.GL873654 I 21 C 0 s mm10.chr7 34318325 5 + 145441459 GGGCA i mm10.chr7 C 0 n 0 s canFam3.chr1 118040217 5 + 122678785 GAGCA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 270510 5 - 643850 GGGCA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=158993.000000 s hg38.chr19_GL383574v1_alt 104268 30 + 155864 -----GGTGTGTCAGAGTCTGCCC------CATGGGGAAAG s panTro5.chr19 36172218 30 + 61309027 -----GGTGTGTCAGAGTCTGCCC------CATGGGGAAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916755 30 + 64411610 -----GGTGTGTCAGAGTCTGCCC------CATGGGGAAAG i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925631 30 - 106955855 -----GGTGTGTCAGAGTCTGCCC------CATGGGAAAAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241119 30 + 53671032 -----GGTGTGTCAGAGTCTGCCC------CATGGAGAAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695055 30 + 59248254 -----GGTGTGTCAGAGTCTGCCC------CATGGAGAAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563410 30 - 13342542 -----GGTGTGTCAGAGTCTGCCC------CATGGAGAAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5491761 30 + 7714307 -----GGTGTGTCAGAGTCTGCCC------CATGGAGAAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295578 30 + 50890351 -----GGTGTGTCAGAGTCAGCCC------CATGGAGAAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924917 30 - 2385121 -----GGTGTGTCAGAGTCTGCCC------CATGGAGAAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370017 29 + 4274983 -----GGTGTGTCAGAGTCTGCCC------CATGG-GAAAA i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5509933 29 + 5549422 -----GGTGGGTT-GAGCCTGCCT------CCTGGGGAAAG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 118040222 28 + 122678785 -------------ACTGGCTGTCTGCTGGGCATGGAGAGAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 270515 35 - 643850 CAGAACAACTGGCTGAGTTTGCTC------AGTCAGGAGAG i dasNov3.JH563638 C 0 n 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e mm10.chr7 34318330 0 + 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=7800.000000 s hg38.chr19_GL383574v1_alt 104298 1 + 155864 G s panTro5.chr19 36172248 1 + 61309027 G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916785 1 + 64411610 G i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925661 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241149 1 + 53671032 G i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695085 1 + 59248254 G i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563440 1 - 13342542 G i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5491791 1 + 7714307 G i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295608 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924947 1 - 2385121 G i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370046 1 + 4274983 G i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5509962 1 + 5549422 G i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 118040250 1 + 122678785 G i canFam3.chr1 C 0 n 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270550 0 - 643850 I e mm10.chr7 34318330 0 + 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=43649.000000 s hg38.chr19_GL383574v1_alt 104299 9 + 155864 GCCAATTTA s panTro5.chr19 36172249 9 + 61309027 GCCAATTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916786 9 + 64411610 GCCAATTTA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925662 9 - 106955855 GCCAATTTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241150 9 + 53671032 GTCAATTTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695086 9 + 59248254 GTCAATTTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563441 9 - 13342542 GTCAATTTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5491792 9 + 7714307 GCCAATTTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295609 9 + 50890351 GCCAATTTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924948 9 - 2385121 GCCAGTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370047 9 + 4274983 GCCAATTTA i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5509963 9 + 5549422 GCTGCTTTA i otoGar3.GL873654 C 0 I 5 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270550 0 - 643850 I e mm10.chr7 34318330 0 + 145441459 I e canFam3.chr1 118040251 0 + 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=1402354.000000 s hg38.chr19_GL383574v1_alt 104308 309 + 155864 ACATCTCATTTGTgactggttgcggtggctcacgcctgtaatctcaccactttgagagaccgggctggcagaccacttgagctcaggagttcaagactagccttggcaacatggcgaaatcctgtctctacaaaaaatacaaaaactagcctggcgtggtggtgcatgcccatagtcccagctactttggaggccgaggtgagaggatggcttgagctcaggaggtggaggttgcagtgagccaagatcatgctactgtactccagtctgggtgacagagccagaccctgtctca----aaCCAACCAACCAA s panTro5.chr19 36172258 281 + 61309027 ACATCTCATTTGTgactggttgcggtggctcacgcctgtaatctcaccactttgagagactgggccggcagaccgcttgagctcaggagttcgagaccagccttggcaatatggcgaaatcctgtctctacaaaaaatacaaaaactagcctggcgtggtggtgcatgccc----------------------------tgagaggatggcttgagctcaggaggtggaggttgcagtgagccaagatcatgctactgtactccagtctgggtgacagagccagaccctgtctca----aacaaaCCAATCAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39916795 281 + 64411610 ACATCTCATTTGTgactggttgcggtggctcacgcctgtaatctcaccactttgagagactgggccggcagaccacttgagctcaggagttcgagaccagccttggcaatatggcgaaatcctgtctctacaaaaaatacaaaaactagcctggcgtggtggtgcatgccc----------------------------tgagaggatggcttgagctcaggaggtggaggttgcagtgagccaagatcatgctactgtactccagtctgggtgacagagccagaccctgtctca----aacaaaCCAATCAA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925671 308 - 106955855 ACATCTCATTTGTGGCTGTTGgcagtggctcatgcctgtaatcccaccactttgagagaccgggccggcagaccacttgagctcaggagttcgagaccagccttggcaacatggtgaaatcctgtctctac-aaaaatacaaaaactagcctggcatggtggtgcatgcccatagtcctagctactttggaggctgaggtgagaggatggcttgagctcagtgggtggaggttgcagtgagccaagatcatgctactgtactccagcctgggtgacagagccagaccctgtctca----aacaaaCCAACCAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241159 309 + 53671032 ACATCTCATTTGTggctggttgtggtggctcacacctgtaatcccactactttgagagaccaggctggtggaccgcttgagctcaggagttcaagaccagccttggcaacatggtgaaaccctgtctctgcaaaaaatacaaaaactagcctggcatggtggcgtacgcccatagtcccagctcctttgcaggctgaggtgaaaggatgacttgagctaaggaggtggaggttgcagtgagccaagatcatgctactgtactccagtctgggtgacagagccagaacctgtctca----aaCCAACCAACCAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695095 309 + 59248254 ACATCTCATTTGTggctggttgtggtggctcacacctgtaatcccactactttgagagaccaggctggtggaccgcttgagctcaggagttcaagaccagccttggcaacatggtgaaaccctgtctctgcaaaaaatacaaaaactagcctggcatggtggcgtacgcccatagtcccagctcctttgcaggctgaggtgagaggatgacttgagctaaggaggtggaggttgcagtgagccaagatcatgctactgtactccagtctgggtgacagagccagaacctgtctca----aaCCAACCAACCAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563450 309 - 13342542 ACATCTCATTTGTggctggttgtggtggctcacacctgtaatcccactactttgagagaccaggctggtggaccgcttgagctcaggagttcaagaccagccttggcaacatggtgaaaccctgtctctgcaaaaaatacaaaaactagcctggcatggtggcgtacgcccatagtcccagctcctttgcaggctgaggtgagaggatgacttgagctaaggaggtggaggttgcagtgagccaagatcatgctactgtactccagtctgggtgacagagccagaacctgtctca----aaCCAACCAACCAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5491801 309 + 7714307 ACATCTCATTTGTggctggttgtggtggctcacacctgtaatcccactactttgagagaccaggctggtggaccacttgagctcaggagttcaagaccagccttggcaacatggtgaaaccctgtttctgcaaaaaataaaaaaactagcctggcatggtggcgtacgcccatagtcccagctcctttgcaggctgaggtgagaggatgacttgagctaaggaggtggaggttgcagtgagccaagatcatgctactgtactccagtctgggtgacagagccagaacctgtctca----aaCCAACCAACCAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295618 313 + 50890351 ACATCTCATTTGTggctggttgtggtggctcacacctgtaatcccactactttgagagaccaggctggtggactgcttgagctcaggagttccagaccagccttggcaacatggtgaaaccctgtctctgcaaaaaatacaaaaactagcctggcatcgtggcgtacgcccatagtcccagctcctttgcaggctgaggtgagaggatgacttgagctcaggaagtggaggttgcagtgagccaagatcatgctactgtactccagtctgggtgacagagccagaacctgtctcaaaCCAACCAACCAACCAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 924957 309 - 2385121 ACATCTCATTTGTggctggttgtcgtggctcacacctgtaatcccactactttgagagaccaggctggtggaccgcttgagctcaggagttcaagaccagccttggcaacatggtgaaaccctgtctctgcaaaaaatacaaaaactagcctggcatggtggcgtacgcccatagtcccagctcctttgcaggctgaggtgagaggatgacttgagctaaggaggtggaggttgcagtgagccaagatcatgctactatactccagtctgggtgacagagccagaacctgtctca----aaCCAACCAACCAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370056 301 + 4274983 ACATCTCATTTGTggctggttgtggtggctaacacctgtaatcccaccactttgagagaccaggctggtg--------gagctcaggagttcaagaccagccttggcaacatggtgaaaccctgtctctgcaaaaaatacaaaaactagcctggcatggtggcgtacgcccatagtcccagctcctttgtaggctgaggtgagaggatgacttgagctcaggaggtggaggttgcagtgagccaagatcatgctactgtactccagtctgggtgacagagccagaacctgtctca----aaCCAACCAACCAA i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 598229 58 + 2501019 I e micMur3.chr22 3983464 196 - 30143674 I e dasNov3.JH563638 270550 0 - 643850 I e otoGar3.GL873654 5509972 5 + 5549422 I e mm10.chr7 34318330 0 + 145441459 I e canFam3.chr1 118040251 0 + 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=7800.000000 s hg38.chr19_GL383574v1_alt 104617 1 + 155864 C s panTro5.chr19 36172539 1 + 61309027 C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917076 1 + 64411610 C i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925979 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241468 1 + 53671032 C i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695404 1 + 59248254 C i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563759 1 - 13342542 C i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492110 1 + 7714307 C i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295931 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925266 1 - 2385121 C i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370357 1 + 4274983 C i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3983660 1 - 30143674 C i micMur3.chr22 I 196 C 0 s proCoq1.NW_012149263v1 598287 1 + 2501019 C i proCoq1.NW_012149263v1 I 58 C 0 e dasNov3.JH563638 270550 0 - 643850 I e otoGar3.GL873654 5509972 5 + 5549422 I e mm10.chr7 34318330 0 + 145441459 I e canFam3.chr1 118040251 0 + 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=315043.000000 s hg38.chr19_GL383574v1_alt 104618 40 + 155864 CCATCTGGTGTTTACCAAGTGCATCCAGGTATGGTCACTG s panTro5.chr19 36172540 40 + 61309027 CCATCTGGTGTTTACCAAGTGCATCCAGGTATGGTCACTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917077 40 + 64411610 CCATCTGGTGTTTACCAAGTGCATCCAGGTATGGTCACTG i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63925980 40 - 106955855 CCATCTGGTGTTTACCAAGTGCATCCAGGTATGGTCACTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241469 40 + 53671032 CCATCTGGTGTTTACCAAGTACATCCAGGTGTGGTCACTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695405 40 + 59248254 CCATCTGGTGTTTACCAAGTACATCCAGGTGTGGTCACTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563760 40 - 13342542 CCATCTGGTGTTTACCAAGTACATCCAGGTGTGGTCACTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492111 40 + 7714307 CCATCTGGTGTTTACCAAGTACATCCAGGTGTGGTCACTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295932 40 + 50890351 CCATCTGGTGTTTACCAAGTACATCCAGGTGTGGTCACTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925267 40 - 2385121 CCATCTGGTGTTTACCAAGTACATCCAGGTGTGGTCACTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370358 40 + 4274983 CCATCTGGTGTTTACCAAGTACATCCAGGTGTGGTCACTG i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3983661 40 - 30143674 CCATCTGGTATTTACCAGGTGCCTCCGGGTGTGGTCACTG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 598288 40 + 2501019 CCATCTGGTATTTACCAGGTGCCTCCGGGTGTGGTCACTG i proCoq1.NW_012149263v1 C 0 I 107 s otoGar3.GL873654 5509977 39 + 5549422 CCATCTGGTGTTTACTAGCGGCCTACGGG-GTGCTCACTG i otoGar3.GL873654 I 5 C 0 s mm10.chr7 111124985 30 - 145441459 CCAACTGATGTTTATCAAGT----------GTGCTCCCTG i mm10.chr7 I 1256 C 0 e dasNov3.JH563638 270550 0 - 643850 I e canFam3.chr1 118040251 0 + 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=71287.000000 s hg38.chr19_GL383574v1_alt 104658 11 + 155864 ATGGATTCTAT s panTro5.chr19 36172580 11 + 61309027 ATGGATTCTAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917117 11 + 64411610 ATGGATTCTAT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926020 11 - 106955855 AAGGATTCTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241509 11 + 53671032 AAGGATTCTGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695445 11 + 59248254 AAGGATTCTGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563800 11 - 13342542 AAGGATTCTGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492151 11 + 7714307 AAGGATTCTGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295972 11 + 50890351 AAGGATTCTGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925307 11 - 2385121 AAGGATTCTGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370398 11 + 4274983 AAGGATTCTGT i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3983701 11 - 30143674 GAGGATTCTGT i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5510016 11 + 5549422 GAGTATTCCCT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111125015 11 - 145441459 GAGGATTCTGT i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 598328 107 + 2501019 I e dasNov3.JH563638 270550 0 - 643850 I e canFam3.chr1 118040251 0 + 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=759531.000000 s hg38.chr19_GL383574v1_alt 104669 109 + 155864 GGCAAGGTCCAGTGGCCCCTGGGGCCTGTAGCAAGAGCTAGGAGGACCTCTGAATAACAGATGGGCTTA-TCTGAGACTGTAGGAGCTACAACTGGCACACTCAAAAGCC s panTro5.chr19 36172591 109 + 61309027 GGCAAGGTCCAGTGGCCCCTGGGGCCTGTAGCAAGAGCTAGGAGGACCTCTGAATAACAGATGGGCTTA-TCTGAGACTGTAGGAGCTACAACTGGCACACTCAAAAGCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917128 109 + 64411610 GGCAAGGTCCAGTGGCCCCTGGGGCCTGTAGCAAGAGCTAGGAGGACCTCTGAATAACAGATGGGCTTA-TCTGAGACTGTAGGAGCTACAACTGGCACACTCAAAAGCC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926031 109 - 106955855 GGCAAGGTCCAGTGGCCCCTGGGGCCTGTAGCAAGAGCTAGGAGGACCTCTGAATAACAGATGGGCTTA-TCTGAGACTGTAGGAGCTACAACTGGCACACTCAAAAGCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241520 109 + 53671032 GGCAAGGTCCAGTGCCCCCTGGGGCTTGTAGCAAGAGCTAGGGGGACCTCTGAATAACAGATGGGCTTA-TCTGAGACTGCAGGAGCCACAACTGGCACACTCAAAAGCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695456 109 + 59248254 GGCAAGGTCCAGTGCCCCCTGGGGCTTGTAGCAAGAGCTAGGGGGACCTCTGAATAACAGATGGGCTTA-TCTGAGACTGCAGGAGCCACAACTGGCACACTCAAAAGCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563811 109 - 13342542 GGCAAGGTCCAGTGCCCCCTGGGGCTTGTAGCAAGAGCTAGGGGGACCTCTGAATAACAGATGGGCTTA-TCTGAGACTGCAGGAGCCACAACTGGCACACTCAAAAGCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492162 109 + 7714307 GGCAAGGTCCAGTGCCCCCTGGGGCTTATAGCAAGAGCTAGGAGGACCTCTGAATAATAGATGGGCTTA-TCTGAGACTGCAGGAGCCACAACTGGCACACTCAAAAGCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29295983 109 + 50890351 GGCAAGGTCCAGCGGCTCCTGGGGCTTGTAGCAAGAGCTAGGAGGACCTCTGAATAACAGATGGGCTTA-TCTGAGACTGCAGGAGCCACAACTGGCACACTCAAAAGCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925318 109 - 2385121 GGCAAGGTCCAGTGCCCCCTGGGGCTTGTAGCAAGAGCTAGGAGGACCTCTGAATAACAGATGGGCTTA-TCTGAGACTGCAGGAGCCACAACTGGCACACTCAAAAGCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370409 109 + 4274983 GGCAAGGTCCAGTGGCCCCTGGGGCTTGTAGCAAGAGCTAGGAGGACCTCTGAATAACAGATGGGCTTA-TCTGAGACTGCAGGAGCCACAACTGGCACACTCAAAAGCT i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3983712 88 - 30143674 ----------------------GGCCTTTAGCAAGAGCTAAGAGGGCCTCTGAGTAAGAGATGGGCTTGTTCTGAGACTGTAGGAGCCACAGTTGGCCCACTCAAAAGCC i micMur3.chr22 C 0 I 23 s otoGar3.GL873654 5510027 88 + 5549422 ----------------------GGTCTGTAGCAAAGGCTAGGAGGGCCTCTGAATAAGAGATGGGCTTGTTTTAAGACTGCAGGGGCCGTAATTGGCCTACTCAAAAGCC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111125026 97 - 145441459 GTCATGGTCTAATAGCCGCTGGGGCCAACAGCAATAGCTAAGAGAGCCTATGATTAAGAGGTAGCTTTa-acc-aggctggagg----------tacaggcctataatc- i mm10.chr7 C 0 C 0 s canFam3.chr1 4639983 110 - 122678785 GGCGTAGCCCCCGGGCCCCCGGGGCCTGTCCTAGGAGCTAGGAGGGCCTCCGAGTGGTGGATGGGCTTGTCCTGAGACTGCAGGACCCACAGTTGGCCCACGTAGAAGCC i canFam3.chr1 I 58 C 0 e proCoq1.NW_012149263v1 598328 107 + 2501019 I e dasNov3.JH563638 270550 0 - 643850 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=23352.000000 s hg38.chr19_GL383574v1_alt 104778 5 + 155864 AGCCG s panTro5.chr19 36172700 5 + 61309027 TGCCG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917237 5 + 64411610 TGCCG i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926140 5 - 106955855 TGCCG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241629 5 + 53671032 TGCCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695565 5 + 59248254 TGCCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563920 5 - 13342542 TGCCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492271 5 + 7714307 TGCCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296092 5 + 50890351 TGCCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925427 5 - 2385121 TGCCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370518 5 + 4274983 TGCCA i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4640093 5 - 122678785 AGCCG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 598328 107 + 2501019 I e micMur3.chr22 3983800 23 - 30143674 I e dasNov3.JH563638 270550 0 - 643850 I e otoGar3.GL873654 5510115 0 + 5549422 C e mm10.chr7 111125123 0 - 145441459 C e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=228379.000000 s hg38.chr19_GL383574v1_alt 104783 38 + 155864 CTGG----------------------------ccagcactttgggaggctgaggtgggaggatcac s panTro5.chr19 36172705 38 + 61309027 CTGG----------------------------ccagcactttgggaggctgaggtaggaggatcac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917242 38 + 64411610 CTGG----------------------------ctagcactttgggaggctgaggtaggaggatcac i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926145 38 - 106955855 CTGG----------------------------ccagcactttgggaggctgaggtgggaggatcgc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241634 66 + 53671032 CTggccaggcatggtggctcatgcctgtaaccccagcactttgggaggctgaggtgggaggatcgc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695570 66 + 59248254 CTggccaggcatggtggctcatgcctgtaaccccagcactttgggaggctgaggtgggaggatcgc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563925 66 - 13342542 CTggccaggcatggtggctcatgcctgtaaccccagcactttgggaggctgaggtgggaggatcgc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492276 66 + 7714307 CTggccaggcatggtggctcatgcctgtaaccccagcactttgggaggctgaggtgggaggattgc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296097 66 + 50890351 CTggccaggcatggtggctcatgcctgtaaccccagcactttgggaggctgaggtgggaggatcgc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925432 66 - 2385121 CTggccaggcatggtggctcatgcctgtaaccccagcactttgggaggctgaggtgggaggatccc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370523 66 + 4274983 CTggccaggcatggtggctcatgcctataaccccagcactttgggaggctgaggtgggaggatcgc i colAng1.NW_012111697v1 C 0 C 0 s mm10.chr7 111125123 34 - 145441459 --------------------------------tcaactatttaggaagctgaggcaggaggatcac i mm10.chr7 C 0 I 2281 e proCoq1.NW_012149263v1 598328 107 + 2501019 I e micMur3.chr22 3983800 23 - 30143674 I e dasNov3.JH563638 270550 0 - 643850 I e otoGar3.GL873654 5510115 0 + 5549422 C e canFam3.chr1 4640098 0 - 122678785 C e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=342420.000000 s hg38.chr19_GL383574v1_alt 104821 79 + 155864 tcttgagcccaggagttcaaaaccagcctaggcaacatggtaaggggccgtctccaccaaacaaacaaaCGACAAAACT s panTro5.chr19 36172743 79 + 61309027 tcttgagcccaggagttcaaaaccagcctaagcaacatggtaaggggccgtctccaccaaacaaacaaaCGACAAAACT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917280 79 + 64411610 tcttgagcccaggagttcaaaaccagcctaagcaacatggtaaggggccgtctccaccaaacaaacaaaCGACAAAACT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926183 79 - 106955855 ttttgagcccaggggttcaaaaccagcctgggcaacatggtaagagctcatctccaccaaacaaacaaaCGACAAAACT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241700 75 + 53671032 tcttgagctcaggagttcgaaaccagcctgggcaacatggtaagagcccatctccac----caaacaaatgacaaaact i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695636 75 + 59248254 tcttgagctcaggagttcgaaaccagcctgggcaacatggtaagagcccatctccac----caaacaaatgacaaaact i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4563991 75 - 13342542 tcttgagttcaggagttcgaaaccagcctgggcaacatggtaagagcccatctccac----caaacaaatgacaaaact i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492342 75 + 7714307 tcttgagctcaggagtttgaaaccagcctgggcaacatggtaagagcccatctccac----caaacaaatgacaaaact i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296163 75 + 50890351 ttttgagcccaggagtttgaaaccagcctgggcaacatggtaagagcccatctccac----caaacaaacaacaaAACT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925498 75 - 2385121 tcttgagctcaggagttcgaaaccagcctgggcaacatggtaagagcccatctccac----caaacaaatgacaaaact i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370589 75 + 4274983 tcttgagcccaggagttcgaaaccagcctgggcaacatggtaagagcccatctccac----caaacaaacaacaaAACT i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 598328 107 + 2501019 I e micMur3.chr22 3983800 23 - 30143674 I e dasNov3.JH563638 270550 0 - 643850 I e otoGar3.GL873654 5510115 0 + 5549422 C e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4640098 0 - 122678785 C e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=40777.000000 s hg38.chr19_GL383574v1_alt 104900 8 + 155864 TGCCACCA s panTro5.chr19 36172822 8 + 61309027 TGCCACCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917359 8 + 64411610 TGCCACCA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926262 8 - 106955855 TGCCACCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241775 8 + 53671032 tGCCACCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695711 8 + 59248254 tGCCACCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4564066 8 - 13342542 tGCCACCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492417 8 + 7714307 tGCCACCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296238 8 + 50890351 TGCCACCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925573 8 - 2385121 tGCCATCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370664 8 + 4274983 TGCCACTA i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5510115 8 + 5549422 TGGTATCC i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 598328 107 + 2501019 I e micMur3.chr22 3983800 23 - 30143674 I e dasNov3.JH563638 270550 0 - 643850 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4640098 0 - 122678785 C e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=13326.000000 s hg38.chr19_GL383574v1_alt 104908 2 + 155864 TC s panTro5.chr19 36172830 2 + 61309027 TC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917367 2 + 64411610 TC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926270 2 - 106955855 TC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241783 2 + 53671032 TC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695719 2 + 59248254 TC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4564074 2 - 13342542 TC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492425 2 + 7714307 TC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296246 2 + 50890351 TC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925581 2 - 2385121 TC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370672 2 + 4274983 TC i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5510123 2 + 5549422 TT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4640098 2 - 122678785 TC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 598328 107 + 2501019 I e micMur3.chr22 3983800 23 - 30143674 I e dasNov3.JH563638 270550 0 - 643850 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=19258.000000 s hg38.chr19_GL383574v1_alt 104910 3 + 155864 ATT s panTro5.chr19 36172832 3 + 61309027 ATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917369 3 + 64411610 ATT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926272 3 - 106955855 ATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241785 3 + 53671032 ATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695721 3 + 59248254 ATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4564076 3 - 13342542 ATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492427 3 + 7714307 ATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296248 3 + 50890351 ATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925583 3 - 2385121 ATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370674 3 + 4274983 ATT i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5510125 3 + 5549422 GTC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4640100 3 - 122678785 ATC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 374753 3 + 643850 ATC i dasNov3.JH563638 M 964 C 0 e proCoq1.NW_012149263v1 598328 107 + 2501019 I e micMur3.chr22 3983800 23 - 30143674 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=75347.000000 s hg38.chr19_GL383574v1_alt 104913 10 + 155864 CCTAGCTCCT s panTro5.chr19 36172835 10 + 61309027 CCTAGCTCCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917372 10 + 64411610 CCTAGCTCCT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926275 10 - 106955855 CCTAGCTCCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241788 10 + 53671032 TCTAGCCCCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695724 10 + 59248254 TCTAGCCCCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4564079 10 - 13342542 TCTAGCCCCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492430 10 + 7714307 TCTAGCCCCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296251 10 + 50890351 CCTAGCCCCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925586 10 - 2385121 TCTAGCCCCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370677 10 + 4274983 CCTAGCCCCT i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 598435 10 + 2501019 CCTGGCCCCT i proCoq1.NW_012149263v1 I 107 C 0 s otoGar3.GL873654 5510128 10 + 5549422 CCTGGCCACT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4640103 10 - 122678785 CCTGGTCCCT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 374756 10 + 643850 CCTGGCACCC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3983800 23 - 30143674 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=553152.000000 s hg38.chr19_GL383574v1_alt 104923 63 + 155864 TTTCCAGCCTACAAAAGCAAGAGGACACTAG--CACCCAG-GCACACTTCCTCCAAGCCAGCTGT-------C s panTro5.chr19 36172845 63 + 61309027 TTTCCAGCCTACAAAAGCAAGACGACACTAG--CACCCAG-GCACACTTCCTCCAAGCCAGCTGT-------C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917382 63 + 64411610 TTTCCAACCTACAAAAGCAAGACGACACTAG--CACCCAG-GCACACTTCCTCCAAGCCAGCTGT-------C i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926285 63 - 106955855 TTTCCAGCCTACAAAAGCAAGAGGACACTAG--CACCCAG-GCAGACTTCCTCCAAGCCAGCTGT-------C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241798 63 + 53671032 TTTCCAGCCTACAAAAGCAAGAGGACGCTAG--CACCCAG-GCACACTTCCTCCAAGCCAGCTGT-------C i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695734 63 + 59248254 TTTCCAGCCTACAAAAGCAAGAGGACGCTAG--CACCCAG-GCACACTTCCTCCAAGCCAGCTGT-------C i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4564089 63 - 13342542 TTTCCAGCCTACAAAAGCAAGAGGACGCTAG--CACCCAG-GCACACTTCCTCCAAGCCAGCTGT-------C i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492440 63 + 7714307 TTTCCAGCCTACAAAAGCAAGAGGACGCTAG--CACCCAG-GCACACTTCCTCCAAGCCAGCTGT-------C i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296261 70 + 50890351 TTTCCAGCCTACAAAAGCAAGAGGACGCTAG--CACCCAG-GCACACTTCCTCCAAGCCAGCTGTcctcttcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925596 63 - 2385121 TTTCCAGCCTACAAAAGCAAGAGGACGCTAG--CACCCAG-GCACACTTCCTCCAAGCCAGCTGT-------C i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370687 63 + 4274983 TTTCCAGCCTACAAAAGCAAGAGGATGCTAG--CACCCAG-GCACACTTCCTCCAAGCCAGCTGT-------C i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3983823 65 - 30143674 TTTCCAGCCTACATAGGCAAGATGACACCAGCCCACCCAG-GGACACTTCCTCCAAGCCAGCTGT-------C i micMur3.chr22 I 23 I 382 s proCoq1.NW_012149263v1 598445 63 + 2501019 TTTCCAGCCTACGTAGGCAAGATGACCCCAG--CACCCAG-GGACACTTCCACCAAGCCAGCAGT-------C i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5510138 63 + 5549422 GTTCCAGCCTACCCAGGCAAGATAACACCAG--CACCCAG-GGACACTTCCTCCAAGTTAGCTGT-------C i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4640113 62 - 122678785 -TCTCGGCCTCCACAGGTAAGAGGACGCCAG--CACCCAG-AGGCACTTCCTCCGACCCAGCTGT-------C i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 374766 54 + 643850 TTTCCAGTCCACATAGGCAAGATGATGCCAG--CACCCAGTGGATGCTTCCTCCAA----------------- i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=23328.000000 s hg38.chr19_GL383574v1_alt 104986 3 + 155864 CTC s panTro5.chr19 36172908 3 + 61309027 CTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917445 3 + 64411610 CTC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926348 3 - 106955855 CTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241861 3 + 53671032 CTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695797 3 + 59248254 CTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4564152 3 - 13342542 CTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492503 3 + 7714307 CTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296331 3 + 50890351 ctc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925659 3 - 2385121 CTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370750 3 + 4274983 TTC i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 598508 3 + 2501019 CTC i proCoq1.NW_012149263v1 C 0 I 587 s otoGar3.GL873654 5510201 3 + 5549422 CTC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4640175 3 - 122678785 TTC i canFam3.chr1 C 0 C 0 e micMur3.chr22 3983888 382 - 30143674 I e dasNov3.JH563638 374820 0 + 643850 C e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=507203.000000 s hg38.chr19_GL383574v1_alt 104989 91 + 155864 TTCCCTCTTACAACTCTCCTCCTGTGGCTCGGGTCCTACAGCCCAGCCCCTCATCTCAGGAACACT----CTTGCCCTACTCTCCGTTACTCAAC s panTro5.chr19 36172911 91 + 61309027 TTCCCTCTTACATCTCTCCTCCTGTGGCTCGGGTCCTACAGCCCAGCCCATCATCTCAGGAACACT----CTTGCCCTACTCTCCGTTACTCAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917448 91 + 64411610 TTCCCTCTTACATCTCTCCTCCTGTGGCTCGGGTCCTACAGCCCAGCCCATCATCTCAGGAATGCT----CTTGCCCTACTCTCCGTTACTCAAC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926351 91 - 106955855 TTCCCTGTTACATCTCTCCTCCTGCGGCTTGGGTCCTACAGCCCAGCCCATCATCTCAGGAACACT----CTTGCTCTACTGTCTGTTACTCAAC i nomLeu3.chr10 C 0 I 7 s rheMac8.chr19 30241864 91 + 53671032 TTCCCTCTTCCCTCTCTCCTCCTGTGGTTCAGGTTCTACAGCTCAGTCCATCATGTCAGGAACACT----CTTGCCCTACTCTCCATTACTCAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695800 91 + 59248254 TTCCCTCTTCCCTCTCTCCTCCTGTGGTTCAGGTTCTACAGCTCAGTCCATCATGTCAGGAACACT----CTTGCCCTACTCTCCATTACTCAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4564155 91 - 13342542 TTCCCTCTTCCCTCTCTCCTCCTGTGGTTCAGGTTCTACAGCTCAGTCCATCATGTCAGGAACACT----CTTGCCCTACTCTCCATTACTCAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492506 91 + 7714307 TTCCCTCTTCCCTCTCCCCTCCTGTGGTTCAGGTTCTACAGCTCAGTCCATCATGTCAGGAACACT----CTTGCCCTACTCTCCATTACTCAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296334 91 + 50890351 ttccctcttccctctCTCCTCCTGTGGTTCAGGTTCTACAGCTCAGTTCATCATGTCAGGAACACT----CTTGCCCTACTCTCCATTACTCAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925662 91 - 2385121 TTCCCTCTTCCCTCTCTCCTCCTGTGGTTCAGGTTCTACAGCTCAGTCCATCATGTCAGGAACACT----CTTGCCCTACTCTCCGTTACTCAAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370753 91 + 4274983 TTCCCTCTTCCCTCTCTCCTCCTGTGGTTCAGGTTCTACAGCTCAGTCCATCATGTCAGGAACACT----CTTGCCCTACTCTCCGTTACTCAAC i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5510204 95 + 5549422 CTCTACTTCATATCCTTTCTCCTGTAGCTTGGGTTCCACAGCCAACGATGCAATGTCAGTGACAGTCTTCCTTGCCCCTTTCTCTATCACTCTAT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4640178 85 - 122678785 GCCCATCTCATGTCCCTCCTCTAGGAGCTTGGGGTCCACGGC-----CCATCACGGCAGTGACACT----CTT-CCCGTCTCCCCTGTATTCAAC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 374820 79 + 643850 -------CTCACACCCTTTTCTTGTAGCTTGGGTTCTACAGC-----CCATCACATCAGTTACTCT----CAAGCCCCTCTGTATGTTATTCAGT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 598511 587 + 2501019 I e micMur3.chr22 3983888 382 - 30143674 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=28957.000000 s hg38.chr19_GL383574v1_alt 105080 6 + 155864 CTTCTG s panTro5.chr19 36173002 6 + 61309027 CTTCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917539 6 + 64411610 CTTCTG i panPan2.chr19 C 0 C 0 s rheMac8.chr19 30241955 6 + 53671032 CTTCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695891 6 + 59248254 CTTCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4564246 6 - 13342542 CTTCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492597 6 + 7714307 CTTCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296425 6 + 50890351 CTTCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925753 6 - 2385121 CTTCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370844 6 + 4274983 CTTCTG i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5510299 5 + 5549422 -CCCTG i otoGar3.GL873654 C 0 I 1 s canFam3.chr1 4640263 2 - 122678785 ----TG i canFam3.chr1 C 0 I 4 s dasNov3.JH563638 374899 6 + 643850 CTCCAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 598511 587 + 2501019 I e micMur3.chr22 3983888 382 - 30143674 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e nomLeu3.chr10 63926442 7 - 106955855 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=3787.000000 s hg38.chr19_GL383574v1_alt 105086 2 + 155864 AA- s panTro5.chr19 36173008 2 + 61309027 AA- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917545 2 + 64411610 AA- i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926449 2 - 106955855 AA- i nomLeu3.chr10 I 7 C 0 s rheMac8.chr19 30241961 2 + 53671032 AA- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695897 2 + 59248254 AA- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4564252 2 - 13342542 AA- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492603 2 + 7714307 AA- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296431 2 + 50890351 AA- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925759 2 - 2385121 AA- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370850 2 + 4274983 AA- i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5510305 1 + 5549422 -G- i otoGar3.GL873654 I 1 I 1 s canFam3.chr1 4640269 1 - 122678785 -G- i canFam3.chr1 I 4 I 1 s dasNov3.JH563638 374905 2 + 643850 -AT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 598511 587 + 2501019 I e micMur3.chr22 3983888 382 - 30143674 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=102453.000000 s hg38.chr19_GL383574v1_alt 105088 14 + 155864 GAATCATTGCTCCA s panTro5.chr19 36173010 14 + 61309027 GAATCCTTGCTCCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917547 14 + 64411610 GAATCCTTGCTCCA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926451 14 - 106955855 GAATCCTTGCTCCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241963 14 + 53671032 GAATCCTTGCTCAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695899 14 + 59248254 GAATCCTTGCTCAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4564254 14 - 13342542 GAATCCTTGCTCAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492605 14 + 7714307 GAATCCTTGCTCAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296433 14 + 50890351 GAATCCTTGCTCAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925761 14 - 2385121 GAATCCTTGCTCAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370852 14 + 4274983 GAATCCTTGCTCCA i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3984270 14 - 30143674 GAATCTTTGCTCCA i micMur3.chr22 I 382 C 0 s otoGar3.GL873654 5510307 14 + 5549422 GCATCtttttttgg i otoGar3.GL873654 I 1 I 279 s canFam3.chr1 4640271 14 - 122678785 GAACGCTTGCTCCA i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 374907 14 + 643850 GAATCCTTACTCTA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 598511 587 + 2501019 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=169941.000000 s hg38.chr19_GL383574v1_alt 105102 27 + 155864 CCTTCTTCCC---TTTCACCTAAAAGCTAC s panTro5.chr19 36173024 27 + 61309027 CCTTCTTCCC---TTTTACCTAAAAGCTAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917561 27 + 64411610 CCTTCTTCCC---TTTTACCTAAAAGCTAT i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926465 27 - 106955855 CCTTCTTCCC---TTTTACCTAAAAGCTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30241977 27 + 53671032 CCTTCTTCCC---TTTTACGTAAAAGCTAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695913 27 + 59248254 CCTTCTTCCC---TTTTACGTAAAAGCTAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4564268 27 - 13342542 CCTTCTTCCC---TTTTACGTAAAAGCTAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492619 27 + 7714307 CCTTCTTCCC---TTTTACGTAAAAGCTAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296447 27 + 50890351 CCTTCTTCCC---TTTTACGTAAAACCTAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925775 27 - 2385121 CCTTCTTCCC---TTTTACGTAAAAGCTAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370866 25 + 4274983 CCTTCTTCC-----TTTACGTAAAAGCTAC i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3984284 27 - 30143674 CCTTCTTCAC---TTTTACCTAGAAGCTAC i micMur3.chr22 C 0 I 1099 s canFam3.chr1 4640285 27 - 122678785 CCTGCTTCCC---TTTTACCTGAAAGCTGC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 374921 29 + 643850 -CTTTTTCCCTATTTTTCTCTTAAGGCTGC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 598511 587 + 2501019 I e otoGar3.GL873654 5510321 279 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=40379.000000 s hg38.chr19_GL383574v1_alt 105129 8 + 155864 TGGACAAG s panTro5.chr19 36173051 8 + 61309027 TGGACAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917588 8 + 64411610 TGGACAAG i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926492 8 - 106955855 TGGACAAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30242004 8 + 53671032 TGGACAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695940 8 + 59248254 TGGACAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4564295 8 - 13342542 TGGACAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492646 8 + 7714307 TGGACAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296474 8 + 50890351 TGGACAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925802 8 - 2385121 TGGACAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370891 8 + 4274983 TGGACAAG i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4640312 8 - 122678785 TGGGGAAG i canFam3.chr1 C 0 I 325 s dasNov3.JH563638 374950 1 + 643850 T------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 598511 587 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e otoGar3.GL873654 5510321 279 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=110503.000000 s hg38.chr19_GL383574v1_alt 105137 26 + 155864 TCCCTTAGTAGAAAGGAGATGTCTAC s panTro5.chr19 36173059 26 + 61309027 TCCCTTAGTAGAAAGGAGATGTCTAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917596 26 + 64411610 TCCCTTAGTAGAAAGGAGATGTCTAC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926500 26 - 106955855 TCCCTTAGTAGAAAGGAGATGTCTAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30242012 23 + 53671032 TCCCTTAGTAGAA---AGATGTCTAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695948 23 + 59248254 TCCCTTAGTAGAA---AGATGTCTAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4564303 23 - 13342542 TCCCTTAGTAGAA---AGATGTCTAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492654 23 + 7714307 TCCCTTAGTAGAA---AGATGTCTAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296482 23 + 50890351 TCCCTTAGTAGAA---AGATGTCTAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925810 23 - 2385121 TCTCTTAGTAGAA---AGATGTCTAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370899 23 + 4274983 TCCCTTAGTAGAA---AGATGTCTAC i colAng1.NW_012111697v1 C 0 C 0 s dasNov3.JH563638 374951 19 + 643850 -------GTAGGAAAGAGggttctac i dasNov3.JH563638 C 0 I 562 e proCoq1.NW_012149263v1 598511 587 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e otoGar3.GL873654 5510321 279 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4640320 325 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=1446042.000000 s hg38.chr19_GL383574v1_alt 105163 313 + 155864 AGGCCAgcacgatggctcacgcctgtaatccctgcactttgggaagctga-gcagggcagatcacctgaggtcaggagttcgagaccagccttgccaacatgatgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggcgggtgcctgtaatcccagacacccaggggctgaggcaggagaatcgcttgaacctggtaggaggaggttgcaatgggccgagattgcaccactgcactccagcctgggtgacagagtgagattccat------ctcaaaaattgataaacaaataaaataaagaaa---GA s panTro5.chr19 36173085 316 + 61309027 AGGCCAgcacgatggctcgcgcctgtaatccctgcactttgggaagccga-gaggggccgatcacctgaggtcaggagttcgagaccagccttgccaacatgatgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggcgggtgcctgtaatcccagacacccaggggctgaggcaggagaatcgcttgaacctggtaggaggaggttgcaatgggccgagattgcaccactgcactccagcctgggtgacagagtgagactccgt------ctcaaaaattgataaataaataaaataaagaaaGGCGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917622 316 + 64411610 AGGCCAgcacgatggctcgcgcctgtaatccctgcactttgggaagccga-gaggggcagatcacctgaggtcaggagttcgagaccagccttgccaacatgatgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggcgggtgcctgtaatcccagacacccaggggctgaggcaggagaatcgcttgaacctggtaggaggaggttgcaatgggccgagattgcaccactgcactccagcctgggtgacagagtgagactccgt------ctcaaaaattgataaataaataaaataaagaaaGGCGA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926526 315 - 106955855 AGGCCAgcacgatggctcacgcctgtaatccctacactttgggaagccga-gaggggcagatcacctgaggtcaggagttggagaccagccttgccaacatgatgaaaccccatctctactaaaaatacaaaaattagctgggcatggtggcgggtgcctgtaatcccagatacccaggggctgagacaggagaatcgcttgaacctgggaggtggaggctgcaatgggccgagattgtgccactgcactccagcctgggtgacagagtgagactccgtgggatcctc-------tataaataaataaaataaagaaaGGAGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30242035 312 + 53671032 AGGCCAgcacggtggctcatgcctgtaatccctgcactttgggaagccga-ggggggcagatcacctgaggtcaggagttcgagaccagccttgccaacatggtgaaaccccatctctactaaaaatacaaaaattggccgggtgtggtggcaggcacctgtaatcccagatacccaggggctgaggcaggagaatcgcttgaacctgggaggtggagattgcagtgagccgagatcgtgccactgcgctccagcctgggtgacagagcgagactccat------ctcaaaaattaataaataaataaaataaaGGA----GA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34695971 312 + 59248254 AGGCCAgcacggtggctcatgcctgtaatccctgcactttgggaagccga-ggggggcagatcacctgaggtcaggagttcgagaccagccttgccaacatggtgaaaccccatctctactaaaaatacaaaaattggccgggtgtggtggcaggcacctgtaatcccagatacccaggggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagccgagatcgtgccactgcgctccagcctgggtgacagagcgagactccat------ctcaaaaattaataaataaataaaataaaGGA----GA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4564326 312 - 13342542 AGGCCAgcacggtggctcatgcctgtaatccctgcactttgggaagccga-ggggggcagatcacctgaggtcaggagttcgagaccatcctggctaacacggtgaaaccccatctctgctaaaaatacaaaaattggctgggtgtggtggcaggcacctgtaatcccagatacccaggggctgaggcaggagaatcgcttgaacctcggaggtggaggttgcagtgagccgagatcgtgccactgcgctccagcctgggtgacagagcgagactccat------ctcaaaaattaataaataaataaaataaaGGA----GA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492677 312 + 7714307 AGGCCAgcacggtggctcatgcctgtaatccctgcactttgggaagccga-ggggggcagatcacctgaggtcaggagttcgagaccagccttgccaacatggtgaaaccccatctctactaaaaatacaaaaattggccgggtgtggtggcaggcacctgtaatcccagatacccaggggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagccgagatcgtgccactgcgctccagcctgggtgacagagcgagactccat------ctcaaaaattaataaataaataaaataaaGGA----GA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296505 312 + 50890351 AGGCCAgcacggtggctcatgcctgtaatccctgcactttgggaagccga-ggggggcagatcacctgaggtcaggagttcgagaccagccttgccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggtgtggtggcgggcacctgtaatcccagatacccaggggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagctgagatcgtgccactgcactccagcctgggtgatagagcgagactccat------ctcaaaaattcataaataaataaaataaaGGA----GA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 925833 313 - 2385121 AGGCCAgcacggtggctcatgcctgtaatccctgcactttgggaagccgagggggggcagatcacctgaggtgaggagttcgagaccagccttgccaacatggtgaaaccccatctctactaaaaatacaaaaattggccgggtgtggtggcaggcacctgtaatcccagatacccaggggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagccgagatcgtgccactgcgctccaacctgggtgacagagcgagactccat------ctcaaaaattaataaataaataaaataaaGGA----GA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2370922 301 + 4274983 AGGCCAgcacggtggctcatgcctgtaatccatgcactttgggaagccaa--gggggcagatcacctg-----aggagctcgagaccagccttgccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggtgtggtggtgggcacttgtaatctcagatacccaggggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagccgagatcgtgccactgcactccagcctgggtgacagagcgagactccat------ctcaaaaattaataaat-----aaataaagga----aa i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 598511 587 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 374970 562 + 643850 I e otoGar3.GL873654 5510321 279 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4640320 325 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=2188955.000000 s hg38.chr19_GL383574v1_alt 105476 435 + 155864 TGTCTATAGTTGTCaacctgcagtgaatcctcagtactactggg-aaattctaccatgtttcttttgtccactcacctttgtgcttccagacctttccca-------------------------ctcccctcactcttTGCTGCAGTCTAAGGTAAACCTACCACCAAGCATTTTA-------------------TTT--------------ATGGA---------------------------------TTTATGTAttttgagacagagtctcgctctgtcacccaggctggagtgcagtggtgcaatcatggctcactgcaactttgaactccccgggctcaagtgatcctctcact-ccagcttcctaagtagctgggactacaggtgtatgccaa--tgtgcctagtt-----------aatttttgtattttttgtagagacagggtttcactatgttgcccagg----------------------------ctgatctcaaactcctaggctcaagcaatgagcccaccttggccttccaaagtgttgggattaccactg s panTro5.chr19 36173401 435 + 61309027 TGTCTATAGTTGTCaacctgcagtgaatcctcagtactactggg-aaattctaccatgtttcttctgtccactcacctttgtgcttccagacctttccca-------------------------ctcccctcactcttTGCTGCAGTCTAAGGTAAACCTACCACCAAGCATTTTA-------------------TTT--------------ATGGA---------------------------------TTTATGTAttttgagacagagtctcgctctgtcacccaggctggagtgcagtggtgcaatcatggctcactgcaactttgaactccccggtctcaaatgatcctctcact-ccagcttcctaagtagcggggactacaggtgtatgccaa--tgtgcctggtt-----------aatttttgtattttttgtagagacagggtttcactatgttgcccagg----------------------------ctgacctcaaactcctaggctcaagcaatgagcccaccttggccttccaaagtgttgggattactactg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39917938 435 + 64411610 TGTCTATAGTTGTCaacctgcagtgaatcctcagtactactggg-aaattctaccatgtttcttctgtccactcacctttgtgcttccagacctttccca-------------------------ctcccctcactcttTGCTGCAGTCTAAGGTAAACCTACCACCAAGCATTTTA-------------------TTT--------------ATGGA---------------------------------TTTATGTAttttgagacagagtctcgctctgtcacccaggctggagtgcagtggtgcaatcatggctcactgcaactttgaactccccggtctcaaatgatcctctcact-ccagcttcctaagtagcggggactacaggtgtatgccaa--tgtgcctggtt-----------aatttttgtattttttgtagagacagggtttcactatgttgcccagg----------------------------ctgacctcaaactcctaggctcaagcaatgagcccaccttggccttccaaagtgttgggattactactg i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63926841 433 - 106955855 TGTCTATAG-TGTCAA-CTGCAGTGAATCATCAGTACTACTGGGAAAATTATACCATGTTTCTTCTGTACACTCACCTTTGTGCTTCCAGACCTTTCCCA-------------------------CTCCCCTCACTCTTTGCTGCACTCTAAGGTAAACCTACCACGAAGCATTTTA-------------------TTT--------------ATGGA---------------------------------tttatttattttgagacagagtctcgctctgtcacccaggctggagtgcagtggcgcaatcatggctcactgcaaccttgaactccctgggctcaagtgatcctcccact-ccagccacctaagta-ctgggactgcaggtgcatgccac--tgtgcctggtt-----------aatttttgtattttttgtagagacagggtttcactatgttgcccagg----------------------------ctgatctcaaactcctaggctcaagcaatgagcccaagttggccttccaaagtgttgggattactgctg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30242347 435 + 53671032 TGTCTATGGTTGTCaacctgcagtgaatcctcagtactactggg-aaattctaccacgtttcttctgtccactcacctttgtgcttccagacctttccca-------------------------ctcccctcattcttTGCTGCAGTCTAAGGTAAACCTAACACCAAGCATTTTA-------------------TTT--------------ATGAA---------------------------------TTCAtttattttgagacagagcctcgctctgtcacccaggctggagtgcagtggtacaatcatggttcactgcaattttgaactccccgggttcaaatgatcctctcact-ccagcctcctgagtagctgggactacaggtacatgcccc--tgcacctggct-----------aatttttgtattttttgtagagacagcgtttcactatgttggccagg----------------------------ctgatctcaaactccaaggctcaagcaatgagcccacctcggccttccaaagtgttgggattactggtg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34696283 435 + 59248254 TGTCTATGGTTGTCAACCTGCAGTGAATCCTCAGTACTACTGGG-AAATTCTACCATGTTTCTTCTGTCCACTCACCTTTGTGCTTCCAGACCTTTCCCA-------------------------CTCCCCTCATTCTTTGCTGCAGTCTAAGGTAAACCTAACACCAAGCATTTTA-------------------TTT--------------ATGAA---------------------------------TTCAtttattttgagacagagcctcgctctgtcacccaggctggagtgcagtggcacaatcatggttcactgcaattttgaactccccgggttcaaatgatcctctcact-ccagcctcctgagtagctgggactacaggtacatgcccc--tgcacctggct-----------aatttttgtattttttgtagagacagggtttcactatgttggccagg----------------------------ctgatctcaaactccaaggctcaagcaatgagcccacctcggccttccaaagtgttgggattactggtg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4564638 435 - 13342542 TGTCTATGGTTGTCAACCTGCAGTGAATCCTCAGTACTACTGGG-AAATTCTACCATGTTTTTTCTGTCCACTCACCTTTGTGCTTCCAGACCTTTCCCA-------------------------CTCCCCTCATTCTTTGCTGCAGTCTAAGGTAAACCTAACACCAAGCATTTTA-------------------TTT--------------ATGAA---------------------------------TTCAtttattttgagacagagcctcgctctgtcacccaggctggagtgcagtggcacaatcatggttcactgcaattttgaacttcccgggttcaaatgatcctctcact-ccagcctcctgagtagctgggactacaggtacatgcccc--tgcacctggct-----------aatttttgtattttttgtagagacagggtttcactatgttggccagg----------------------------ctgatctcaaactccaaggctcaagcaatgagcccacctcggccttccaaagtgttgggattactggtg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5492989 435 + 7714307 TGTCTATGGTTGTCAACCTGCAGTGAATCCTCAGTACTACTGGG-AAATTCTACCATGTTTCTTCTGTCCACTCACCTTTGTGCTTCCAGACCTTTCCCA-------------------------CTCCCCTCATTCTTTGCTGCAGTCTAAAGTAAACCTAACACCAAGCATTTTA-------------------TTT--------------ATGAA---------------------------------tttatttattttgagacagagcctcgctctgtcacccaggctggagtgcagtggcacaatcatggttcactgcaattttgaactccccgggttcaagtgatcctctcact-ccagcctcctgagtagctgggactacaggtacatgcccc--tgcacctggct-----------aatttttgtattttttgtagagacagggtttcactatgctggccagg----------------------------ctgatctcaaactccaaggctcaagcaatgagcccacctcggcctcccaaagtgttgggattactggtg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29296817 435 + 50890351 TGTCTATGGTTGTCAACCTGCAGTGAATCCTCAGTACTACTGGG-AAATTCTACCATGTTTCTTCTGTCCACTCACCTTTGTGCTTCCAGACCTTTCCCA-------------------------CTCCCCTCATTCTTTGCTGCAGTCTAAGGTAAACCTACCACCAAGCATTTTA-------------------TTT--------------ATGAA---------------------------------tttatttattttgagacagagtctcacgctgtcacccaggctggagtgcagtggcacaatcagggttcaccgcaattttgaactccccgggttcaagtgatcttctcact-ccagcctcctgagtagctgggactacaggtgcatgcccc--tgcacctggct-----------aatttttgtattttttgtagagacagggtttcactgtgttggccagg----------------------------ctgatctcaaactccaaggctcaagcaatgagcccacctcggccttccaaagtgttgggattactggtg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 926146 435 - 2385121 TGtccatggttgtcaacctgcagtgaatcctcagtactactggg-aaattctaccatgtttcttctgtccactcacctttgtgcttccagacctttccca-------------------------ctcccctcattcttTGCTGCAGTCTAAGGTAAAGCTAACACCAAGCATTTTA-------------------TTT--------------ATGAA---------------------------------tttatttattttgagacagagcctcgctctgtcacccaggctggagtgcagtggcacaatcatggttcactgcaattttgaactccccgggttcaagtgatcctctcact-ccagcctcctgagtagctgggactacaggtacatgcccc--tgcacctggct-----------aatttttgtattttttgtagagacagggtttcactatgttggccagg----------------------------ctgatctcaaactccaaggctcaagcaatgagcccacttcggccttccaaagtgttgggattactggtg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2371223 435 + 4274983 TGTCTATGGTTGTCAACCTGCAGTGTTTCCTCAGTACTACTGGG-AAATTCTACCACGTTTCTTCTGTCCACTCACCTTTGTGCTTCCAGACCTTTCCCA-------------------------CTCCCCTCATTCTTTGCTGCAGTCTAAGGTAAGCCTACCACCAAGCATTTTA-------------------TTT--------------ATGAA---------------------------------tttatttattttgagacagagtctcgctctgtcacccaggctggagtgcagtggcacaatcatggttcactgcaattttgaactccccgggttcaagtgatcctctcact-ccagcctcctgagtagctgggactacaggtgcatgcccc--tgcacctggct-----------aatttttgtattttttgtagagacaaggtttcactatgttggccagg----------------------------gtgatctcaaactccaaggctcaagcaatgagcccacctcagccttccaaagtgttgggattaatggtg i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5510600 528 + 5549422 CTTCACTTTTTATCAACCTGCAATGAATCTTCAGTATTG-TGGC-AAATTCTACTACATTTCTCTTGTCTACTCATCTTTCTGGTTTGAGACCTTTCCCAGTCTTCTCATACCTTCGTCTTCAAGCTTCCCTCACTCTTTGCTGCAGTCTGAGGTAAACCCACCACCAAACATTTTAAATCCTCTCCCTCCAGCATTTTCAGAACCTTACAAGATGAACCTGATAATCTTTCTCCTGTATCCTCtttcttttttacttttttagagacagggtctcattctattgcccaggctgg--------------------------------tctcaaattcccgggctcaagtgatctttctgctgtgggcttccaaagtg-------ccacaggtgtgagccaccatgcAGCCAATTTTACTATTCTAAttttttttttttttttttgagacagagtctcaagctgtcaccctgggtagagtgttgtggtgtcatagctaataccaacttccaactcttgggcttaagtgattctcttgctttagcttcccaggcagcttagattacaggcg i otoGar3.GL873654 I 279 C 0 e proCoq1.NW_012149263v1 598511 587 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 374970 562 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4640320 325 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=81079.000000 s hg38.chr19_GL383574v1_alt 105911 16 + 155864 tgagccacc---aggcccg s panTro5.chr19 36173836 16 + 61309027 tgagccacc---aggcccA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39918373 16 + 64411610 tgagccacc---aggcccA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63927274 16 - 106955855 tgagccacc---aagcctg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30242782 16 + 53671032 tgagccacc---atgcccg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34696718 16 + 59248254 tgagccacc---atgcccg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4565073 16 - 13342542 tgagccacc---atgcccg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5493424 16 + 7714307 tgagccacc---atgcccg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29297252 16 + 50890351 tgagccacc---atgcctg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 926581 16 - 2385121 tgagccacc---atgcccg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2371658 16 + 4274983 tgagccacc---atgcccg i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5511128 16 + 5549422 cctgccaca---atgcctg i otoGar3.GL873654 C 0 I 230 s canFam3.chr1 4640645 18 - 122678785 tgagccatctaggagccc- i canFam3.chr1 I 325 C 0 e proCoq1.NW_012149263v1 598511 587 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 374970 562 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=29502.000000 s hg38.chr19_GL383574v1_alt 105927 6 + 155864 ATCCCA s panTro5.chr19 36173852 6 + 61309027 ATCCCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39918389 6 + 64411610 ATCCCA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63927290 6 - 106955855 ATCCCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30242798 6 + 53671032 ATCCCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34696734 6 + 59248254 ATCCCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4565089 6 - 13342542 ATCCCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5493440 6 + 7714307 ATCCCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29297268 6 + 50890351 ATCTCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 926597 6 - 2385121 ATCCCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2371674 6 + 4274983 ATCCCA i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4640663 3 - 122678785 ---cTG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 598511 587 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 374970 562 + 643850 I e otoGar3.GL873654 5511144 230 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=14028.000000 s hg38.chr19_GL383574v1_alt 105933 2 + 155864 CC s panTro5.chr19 36173858 2 + 61309027 CC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39918395 2 + 64411610 CC i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63927296 2 - 106955855 CC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30242804 2 + 53671032 CC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34696740 2 + 59248254 CC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4565095 2 - 13342542 CC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5493446 2 + 7714307 CC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29297274 2 + 50890351 CC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 926603 2 - 2385121 CC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2371680 2 + 4274983 CC i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4640666 2 - 122678785 CT i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 375532 2 + 643850 CC i dasNov3.JH563638 I 562 C 0 e proCoq1.NW_012149263v1 598511 587 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e otoGar3.GL873654 5511144 230 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=507465.000000 s hg38.chr19_GL383574v1_alt 105935 78 + 155864 AAGCATTTTAGATCCCCTCCTTCAAGCCTTTTCAGAACCTTCACAAGAAGAACCAGATCATC-TCTCTCCTATATCCTC-- s panTro5.chr19 36173860 78 + 61309027 AAGCATTTTAGATCCCCTCCTTCAAGCCTTTTCAGAACCTTCACAAGAAGAACCAGATCATC-TCTCTCCTACATCCTC-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39918397 78 + 64411610 AAGCATTTTAGATCCCCTCCTTCAAGCCTTTTCAGAACCTTCACAAGAAGAACCAGATCATC-TCTCTCCTACATCCTC-- i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63927298 77 - 106955855 AAGCATTTTATATCCCCTCCTTCAAGCCTTTTCAGAA-CTTCACAAGAAGAACCAGATCATC-TCTCTCCTATATCCTC-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30242806 77 + 53671032 AAGCATTTTAGATCCCCTCCCTCAAGCCTTTTCAGAA-CTTCACAAGAAGAACCAGATCATC-TCTCTCCTATAATCTC-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34696742 77 + 59248254 AAGCATTTTAGATCCCCTCCCTCAAGCCTTTTCAGAA-CTTCACAAGAAGAACCAGATCATC-TCTCTCCTATAATCTC-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4565097 77 - 13342542 AAGCATTTTAGATCCCCTCCCTCAAGCCTTTTCAGAA-CTTCACAAGAAGAACCAGATCATC-TCTCTCCTATAATCTC-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5493448 77 + 7714307 AAGCATTTTAGATCCCCTCCCTCAAGCCTTTTCAGAA-CTTCACAAGAAGAACCAGATCATC-TCTCTCCTATAATCTC-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29297276 77 + 50890351 AAGCATTTTAGATCCCCTCCCTCAAGCCTTTTCAGAA-CTTCACAAGAAGAACCAGATCATC-TCTCTCCTATAATCTC-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 926605 77 - 2385121 AAGCATTTTAGATCCCCTCCCTCAAGCCTTTTCAGAA-CTTCACAAGAAGAACCAGATCATC-TCTCTCCTATAATCTC-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2371682 77 + 4274983 AAGCATTTTAGATACCCTCCCTCAAGCCTTTTCAGAA-CTTCACAAGAAGAACCAGATCATC-TCTCTCCTATAATCTC-- i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 599098 77 + 2501019 AAGCATTTTAGATGCCCTCCCTCCAGCCTTTTCAGAA-CCACACAAGACGAACCAGATCATC-TCTCTCCTGTATCCTC-- i proCoq1.NW_012149263v1 I 587 I 875 s canFam3.chr1 4640671 68 - 122678785 AAGCATCTTAGA---CCCCCCTCGAGCCTTTTCAGAA-CCTCATAAAAT------GACAATA-TGTTTCCTGTAACCTC-- i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 375534 80 + 643850 AAACATTTAGGTCCCCCTGCCTCTGGACCTTTTAGAA-CCTCACAATATGAACCAGATCATCATCTCTCCTCTGTTTACTC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3984311 1099 - 30143674 I e otoGar3.GL873654 5511144 230 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=458629.000000 s hg38.chr19_GL383574v1_alt 106013 81 + 155864 AGCCACTTTC----AACCAGATCTTCCTCTTTGACCTTAAAACATGTTTAAGTCTCTTCTACCTTAAAAAAGCAACCACCAAggc s panTro5.chr19 36173938 81 + 61309027 AGCCACTTTC----AACCAGATCTTCCTCTTTGACCTTAAAACATGTTTAAGTCTCTTCTACCTTAAAAAAGCAACCACCAAggc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39918475 81 + 64411610 AGCCACTTTC----AACCAGATCTTCCTCTTTGACCTTAAAACATGTTTAAGTCTCTTCTACCTTAAAAAAGCAACCACCAAggc i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63927375 81 - 106955855 AGCCACTTTC----AATCAGATCCTCCTCTTTGACCTTAAAACATGTTTAAGTCTCTTCTACCTTAAAAAATCGACCACTAAggc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30242883 81 + 53671032 AGCCTCTTTC----AACCAGATCCTCCTCTCTGACCTTAAAACATGCTTAACTCTTTTCTACCTTAAAAAATCAACCACCAAggc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34696819 81 + 59248254 AGCCTCTTTC----AACCAGATCCTCCTCTCTGACCTTAAAACATGCTTAACTCTTTTCTACCTTAAAAAATCAACCACCAAggc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4565174 81 - 13342542 AGCCTCTTTC----AACCAGATCCTCCTCTCTGACCTTAAAACATGCTTAACTCTTTTCTACCTTAAAAAATCAACCACCAAggc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5493525 81 + 7714307 AGCCTCTTTC----AACCAGATCCTCCTCTCTGACCTTAAAACATGCTTGACTCTTTTCTACCTTAAAAAATCAACCACCAAggc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29297353 81 + 50890351 AGCCTGTTTC----AACCAGATCCTCCTCTCTGACCTTAAAACATGCTTAAGTCTCTTCTACCTTAAAAAATCAACCACCAAggc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 926682 81 - 2385121 AGCCTCTTTC----AACCAGATCCTCCTCTCTGACCTTAAAACATGCTTAACTCTCTTCTACCTTAAAAAATCAACCACCAAggc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2371759 81 + 4274983 AGCCTCTTTC----AACCAGATCCTCCTCTCTGACCTTAAAACATGCTTAAGTCTCTTCTACCTTAAAAAATCAACCACCAAggc i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4640739 76 - 122678785 AGCCTCTTTCTGT-TAATAGATCCTCCTCTCTGATATTGAAATGTGTTTAAATCTCTTCCACTTTAATAAAACAACC-------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 375614 83 + 643850 AGTCACTTTCTCTCAACTAGGTTATCCTTGTTGACACTGAAATATGTTT--GTCTCTTCCACCTTAAAATATCAACTACAAAAAC i dasNov3.JH563638 C 0 I 3967 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e otoGar3.GL873654 5511144 230 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=962611.000000 s hg38.chr19_GL383574v1_alt 106094 209 + 155864 caggtgcagtggctcacacctgtaatcccagcactttgggaggccgaggcggtggatcacttgaggccacgaattcaaggccagcctggccagcatggtgaaaccccgtctctactaaaaatacacaaattagctgggcatggtggtgcgtgcctgtaattccagctactcgggaggctgagacaggagaattgcttaaaactgggagg s panTro5.chr19 36174019 209 + 61309027 caggtgcagtggctcacacctgtaatcccagcactttgggaggccgaggcggcggatcgcttgaggtcaggaattcgaggccagcctggccagcatggtgaaaccccgtctccactaaaaatacacaaattagctgggcatggtggtgcgtgcctgtaattccagctactcgggaggctgagacaggagaattgcttaaaactgggagg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39918556 209 + 64411610 caggtgcagtggctcacacctgtaatcccagcactttgggaggccgaggtggcggatcgcttgaggtcaggaattcgaggccagcctggccagcatggtgaaaccccgtctccactaaaaatacacaaattagctgggcatggtggtgcgtgcctgtaattccagctactcgggaggctgagacaggagaattgcttaaaactgggagg i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63927456 209 - 106955855 caggcgcagtggctcacacctgtaatcccagcactttgggaggctgaggcggcggatcacttgaggtcaggaattcgaggccagcctggccaacatggtgaaaccccgtctctactaaaaatacacaagttagctgggcatggtggtgcgtgcctgcaattccagctacttgggaggctgagacaggagaattgcttaaaactgggagg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30242964 209 + 53671032 tgggcgcagtggctcacacctataatcccaggactttgggaggccgaggcagcagatcacttgaggtcaggagttcaaggccagcctggccaacatggtgaaactccatctctactaaaaatacaaaaattagctgggcatggtggtgcgtgtctataatcccagctacttgggaggctgagacaggagaattgcttaaaactgggagg i rheMac8.chr19 C 0 I 6 s macFas5.chr19 34696900 209 + 59248254 tgggcgcagtggctcacacctataatcccaggactttgggaggccgaggcagcagatcacttgaggtcaggagttcgaggccagcctggccaacatggtgaaactccatctctactaaaaatacaaaaattagctgggcatggtggtgcgtatctataatcccagctacttgggaggctgagacaggagaattgcttaaaactgggagg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4565255 209 - 13342542 tgggcgcagtggctcacacctataatcccaggattttgggaggctgaggcagcagatcacttgaggtcaggagttcgaggccagcctggccaacatggtgaaactccatctctactaaaaatacaaaaattagctgggcatggtggtgcgtgtctataatcccagctacttgggaggctgagacaggagaattgcttaaaactgggagg i macNem1.NW_012011689v1 C 0 I 6 s cerAty1.NW_012005268v1 5493606 209 + 7714307 tgggcgcagtggctcacacctataatcccaggactttgggaggccgaggcagcggatcacttgaggtcaggagttcgaggccagcctggccaacacggtgaaactccatctctactaaaaatacaaaaattagctgggcatggtggtgcgtgtctataatcccagctacttgggaggctgagacaggagaattgcttaaaactgggagg i cerAty1.NW_012005268v1 C 0 I 6 s chlSab2.chr6 29297434 209 + 50890351 cgggcgcagtggctcacacctataatcccaggactttgggaggccgaggcagcggatcacttgaggtcaggagttcgaggccagcctggccaacatggtgaaactccatctctactaaaaatacaaaaattagctgggcatggtggtgcatgtctgtaatcccagctacttgggaggctgagacaggagaattgcttaaaactgggagg i chlSab2.chr6 C 0 I 6 s manLeu1.NW_012102454v1 926763 209 - 2385121 cgggcgcagtggctcacacctataatcccacgactttgggaggccgaggcagcggaacacttgaggtcaggagttcgaggccagcctggccaacatggtgaaactccatctctactaaaaatacaaaaattagctgggcatggtggtgcgtgtctataatcccagctacttgggaggctgagacaggagaattgcttaaaactgggagg i manLeu1.NW_012102454v1 C 0 I 6 s colAng1.NW_012111697v1 2371840 209 + 4274983 tgggcgcagtggctcacacctataatcccaggactttggggggccaaggcagcggatcacttgaggtcagaagttcaaggccagcctggccaacatagtgaaactccatctctactaaaaatacaaaaattagctgggcatggtggtgtgtgtctgtaatcccagctacttgggaggctgagacaggagaattgcttaaaactgggagg i colAng1.NW_012111697v1 C 0 I 6 s canFam3.chr1 4640815 57 - 122678785 -------------------------TCCCAAC--------------AGGCA-----------------------------cctgcctggc---------------------------------------tcagctgg-----------------------------------------tggagcatgagact--cttgatcttcggg-- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e otoGar3.GL873654 5511144 230 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=560.000000 s hg38.chr19_GL383574v1_alt 106303 2 + 155864 GA s panTro5.chr19 36174228 2 + 61309027 GA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39918765 2 + 64411610 GA i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63927665 2 - 106955855 ca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34697109 2 + 59248254 ca i macFas5.chr19 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e otoGar3.GL873654 5511144 230 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e chlSab2.chr6 29297643 6 + 50890351 I e canFam3.chr1 4640872 0 - 122678785 C e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372049 6 + 4274983 I e manLeu1.NW_012102454v1 926972 6 - 2385121 I e cerAty1.NW_012005268v1 5493815 6 + 7714307 I e macNem1.NW_012011689v1 4565464 6 - 13342542 I e rheMac8.chr19 30243173 6 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=100528.000000 s hg38.chr19_GL383574v1_alt 106305 217 + 155864 ggccgggcacagtgtctcacacctgcaatctcagcactttgggaggccgaggcgggcggatcacgaggccag--gagatcgagaccatcctggctaacatggtgaaacaccgtctctactaaaaatac-aaaaaaaaattagccgggcgtggtggcgggcgcctgtagttccagctactcaggaggctgaggcaggagaatggtgtgaacccgggaggcg s panTro5.chr19 36174230 217 + 61309027 ggccgggcacagtgtctcacgcttgtaatctcagcactttgggaggccgaggcgggcggatcacgaggccag--gagatcgagaccatcctggctaacatggtgaaacaccgtctctactaaaaacac-aaaaaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggtgtgaacccgggaggcg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39918767 216 + 64411610 ggccgggcacagtgtctcacgcttgtaatctcagcactttgggaggccgaggcaggcggatcacgaggccag--gagatcgagaccatcctggctaacatggtgaaacaccgtctctactaaaaatac--aaaaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggtgtgaacccgggaggcg i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63927667 218 - 106955855 ggccgggcgtggtgtctcatgcctgtaatccccgcactttgggaggccgaggcgggtagatcacgaggtcag--gagatcgcgaccatcctggctaacatggtgaaacccagtctctactaaaaatacaaaaaaaaaattagccgggcgtggtggcaggcgcccatagtcccagctactcgggaggctgaggcaggagaatggtgtgaacccgggaggcg i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 4640872 96 - 122678785 ----------------tcacaagttcaagccc--cacattggg------------------cacAGAGCTTGCTTAGAGCAAAACCA--------AACAAAGCAAAAAATC------ACTAAAAAGCC----------------------------------------TTCC-----CTCAAG---------------------GTAAACTC-------- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e otoGar3.GL873654 5511144 230 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e chlSab2.chr6 29297643 6 + 50890351 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372049 6 + 4274983 I e manLeu1.NW_012102454v1 926972 6 - 2385121 I e cerAty1.NW_012005268v1 5493815 6 + 7714307 I e macNem1.NW_012011689v1 4565464 6 - 13342542 I e macFas5.chr19 34697111 0 + 59248254 C e rheMac8.chr19 30243173 6 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=3010.000000 s hg38.chr19_GL383574v1_alt 106522 4 + 155864 gagc s panTro5.chr19 36174447 4 + 61309027 gagc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39918983 4 + 64411610 gagc i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63927885 4 - 106955855 gagc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34697111 4 + 59248254 gagg i macFas5.chr19 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e otoGar3.GL873654 5511144 230 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e chlSab2.chr6 29297643 6 + 50890351 I e canFam3.chr1 4640968 0 - 122678785 C e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372049 6 + 4274983 I e manLeu1.NW_012102454v1 926972 6 - 2385121 I e cerAty1.NW_012005268v1 5493815 6 + 7714307 I e macNem1.NW_012011689v1 4565464 6 - 13342542 I e rheMac8.chr19 30243173 6 + 53671032 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=306222.000000 s hg38.chr19_GL383574v1_alt 106526 71 + 155864 ttgcagtgagccgaga-ttgcgcctttggactccagcctgggtgacagagtgagattccgtcc-----------aaaaaaaaa s panTro5.chr19 36174451 71 + 61309027 ttgcagtgagccgaga-ttgcgccactggactccagcctgggtgacagagtgagattccgtcc-----------aaaaaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39918987 71 + 64411610 ttgcagtgagccgaga-ttgcgccactggactccagcctgggtgacagagtgagattccgtcc-----------aaaaaaaaa i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63927889 72 - 106955855 ttgcagtgagccaagatttgtgccactggactccagcctgggtgacagagtgagactccgtcc-----------aaaaaaaaa i nomLeu3.chr10 C 0 I 4 s rheMac8.chr19 30243179 77 + 53671032 ttgcagtgcgccgaga-ttgcgccactgcactccagcctgggtgacagagtgagactccatcc-----aaaaaaaaaaaaaaa i rheMac8.chr19 I 6 C 0 s macFas5.chr19 34697115 77 + 59248254 ttgcagtgcgccgaaa-ttgcgccactgcactccagcctgggtgacagagtgagactccatcc-----aaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4565470 82 - 13342542 ttgcagtgcgccgaga-ttgcgccactgcactccagcctgggtgacagagtgagactccatccaaaaaaaaaaaaaaaaaaaa i macNem1.NW_012011689v1 I 6 C 0 s cerAty1.NW_012005268v1 5493821 74 + 7714307 ttgcagtgagccgaga-ttgcgccactgcactccagcctgggtgacagagtgagactccatcc--------aaaaaaaaaaaa i cerAty1.NW_012005268v1 I 6 C 0 s chlSab2.chr6 29297649 76 + 50890351 ttgcagtgaaccgaga-ttgtgccactgcactctagcctgggtgacagagtgagactccgtcc------aaaaaaaaaaaaaa i chlSab2.chr6 I 6 C 0 s manLeu1.NW_012102454v1 926978 75 - 2385121 ttgcagtgagccgaga-ttgcgccactgcactccagcctgggtgacagagtgagactccatcc-------aaaaaaaaaaaaa i manLeu1.NW_012102454v1 I 6 C 0 s colAng1.NW_012111697v1 2372055 71 + 4274983 ttgcagtgagctgaga-ccgcgccactgcactccagcctgggtgacagagtgagactccgtcc-----------aaaaaaaaa i colAng1.NW_012111697v1 I 6 C 0 s canFam3.chr1 4640968 38 - 122678785 ---------------A-TTTCAGCTCCTCCCCACAGCTTGGATGACCAGCTAAG----------------------------- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e otoGar3.GL873654 5511144 230 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e gorGor5.CYUI01015150v1 6330467 0 - 8369475 C a score=2667238.000000 s hg38.chr19_GL383574v1_alt 106597 455 + 155864 aTTCAACCACCAAGAAAGGTATCCCCTCAATctacactgacatctccagcacatacctctcttctaagctccagatcct--catccccaagtgccttattggtgcctcttctttgatgccatgttcacactggaactcgggccattcttcccatcctccaccctcccaaatatggtcctcttccggggcttcccaaaacaatgagtgccagcactacaatggctcatcccagagacccaggagacattcatgattcctacctcttcctcaccctccatatccatt--tcacc--actgattttacatca------attttattccaaaatctttctcaaatttgac-tttcttttttttttccatccccattgccactaccatagtccaTGaatggttttcaaagggaggttcatgtaccccatagtatgggaaggcaatccattgggatactgggagaaaatattag s panTro5.chr19 36174522 455 + 61309027 aTTCAACCACCAAGAAAGGTATCCCCTCAATctacactgacatctccagcacatacctctcttctaagctccagatcct--catccccaagtgccttattggtgcctcttctttgatgccatgttcacactggaactcgggccattcttcccatcctccaccctcccaaatatggtcctcttccggggtttcccaaaacagtgagtgccagcactacaatggctcatcccagagacccaggagacattcatgattcctacctcttcctcaccctccatatccatt--tcacc--actgattttacatca------attttattccaaaatctttctcaaatttgac-tttcttttttttttccatccccattgccactaccatagtccGTGaatggttttcaaagggaggttcacgtaccccatagtatgggaaggcaatccattgggatactggcagaaaatattag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39919058 455 + 64411610 aTTCAACCACCAAGAAAGGTATCCCCTCAATctacactgacatctccagcacatacctctcttctaagctccagatcct--catccccaagtgccttattggtgcctcttctttgatgccatgttcacactggaactcgggccattcttcccatcctccaccctcccaaatatggtcctcttccggggtttcccaaaacagtgagtgccagcactacaatggctcatcccagagacccaggagacattcatgattcctacctcttcctcaccctccatatccatt--tcacc--actgattttacatca------attttattccaaaatctttctcaaatttgac-tttcttttttttttccatccccattgccactaccatagtccaTGaatggttttcaaagggaggttcacgtaccccatagtatgggaaggcaatccattgggatactggcagaaaatattag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6330467 454 - 8369475 aTTCAACCACCAAGAAAGGTATCCCCTCAATctacactgacatctccagcacatacctctcttctaagctccagatcct--catccccaagtgccttattggtgcctcttctttgatgccatgttcacactggaactcgggccattcttcccatcctccaccctcccaaatatggtcctcttccggggcttcccaaaacagtgagtgccagcactacaatggctcatcccagagacccaggagacattcatgattcctacctctccctcaccctccatatccatt--tcacc--actgattttacatca------attttattccaaaatctttctcaaatttgac-tttc-tttttttttccatccccattgccactaccatagtccaTGaatggttttcaaagggaggttcacgtaccccatagtatgggaaggcaatctattgggatactgggggaaaatattag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63927965 450 - 106955855 aaTCAACCACCAAGAAAGGTATCCCCTCAATctacactgacatctccaccacttacctctcttctaagctccagatcct--catccccaagtgccttattggtgcctcctctttgatgccatgttcacactggaactc-ggccattcttcccaacctccaccctcccaaatatggtcctcttccggggcttcccaaaacagtgagtgccagcactacaatggctcatcccagagacccaggagacattcatgattcccacctctccctcaccctccatatccact--t---c--actgattttacatca------attttattccaaaatctttctcaaaattgac-tttc-ttttttttttcatacccattgccactaccatagtccaTGaatggttttcaaagggaggttcacgtaccccatagtatgggaaggcaatccattgggatactgggagaaaatattag i nomLeu3.chr10 I 4 C 0 s rheMac8.chr19 30243256 458 + 53671032 aaTCAACCACTAAGAAAGGTATTCCCTCAATctacactgacatctccagcacatacctctcttataagctccagatcctcacatccccaagcgccttcttggtgcctcctgtttgatgccatgttcacactggaactcgggtcattcttcccatcctccgccctcccaaatatggtccttttccagggtttcccaaaaaagtgagtgccagc---acaatggctcattccagagacccaggagacattcaggattcccacctctccctcaccctccatatccatt--tcaccaaatggattttatttcaccaaagattttattccaaaatctttctcaaatatgac-t----tttttttttccatccccattgccactaccatagtccaTGaatggttttcaaagggaggttcacgtacctcatagtatgggagggccatccattgggatactgggagaaaatattag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34697192 458 + 59248254 aaTCAACCACTAAGAAAGGTATTCCCTCAATctacactgacatctccagcacatacctctcttataagctccagatcctcacatccccaagcgccttcttggtgcctcctgtttgatgccatgttcacactggaactcgggtcattcttcccatcctccgccctcccaaatatggtccttttccagggtttcccaaaaaagtgagtgccagc---acaatggctcattccagagacccaggagacattcaggattcccacctctccctcaccctccatatccatt--tcaccaaatggattttatttcaccaaagattttattccaaaatctttctcaaatatgac-t----tttttttttccatccccattgccactaccatagtccaTGaatggttttcaaagggaggttcacgtacctcatagtatgggagggccatccattgggatactgggagaaaatattag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4565552 458 - 13342542 aaTCAACCACTAAGAAAGGTATTCCCTCAATCTACACTGacatctccagcacatacctctcttataagctccagatcctcacatccccaagcgccttcttggtgcctcctgtttgatgccatgttcacactggaactcgggtcattcttcccatcctccgccctcccaaatatggtccttttccagggtttcccaaaaaagtgagtgccagc---acaatggctcattccagagacccaggagacattcaggattcccacctctccctcaccctccatatccatt--tcaccaaatggattttatttcaccaaagattttattccaaaatctttctcaaatatgac-t----tttttttttccatccccattgccactaccatagtccaTGaatggttttcaaagggaggttcacgtacctcatagtatgggagggccatccattgggatactgggagaaaatattag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5493895 459 + 7714307 aaTCAACCACTAAGAAAGGTATTCCCTCAATctacactgacatctccagcacatacctctcttataagctccagatcctcacatccccaagcgccttcttggtgcctcctgtttgatgccatgttcacactggaactcgggtcattcttcccatcctccgccctcccaaatatggtccttttccagggtttcccaaaaaagtgagtgccagc---acaatggctcatcccagagacccaggagacattcaggattcccacctctccctcaccctccctatccatt--tcaccaaatggattttatttcaccaaagattttattccaaaatctttctcaaatatgactt----tttttttttccatccccattgccactaccatagtccaTGaatggttttcaaagggaggttcacgtacctcatagtatgggagggccatccattgggatactgggagaaaatattag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29297725 456 + 50890351 aaTCAACCACCAAGAAAGGTATTCCCTCAATctacactgacatctccagcacatacctctcttctaagctccagatcct--catccccaagcgccttcttggtgcctcctgtttgatgccatgttcacactggaactcgggtcattcttcccatcctctgccctcccaaatatggtctatttcaagggtttcccaaaaaagtgagtgccagc---acaatggctcatcccagagacccaggagacattcaggattcccacctctccctcaccctccatatccatt--tcaccaaatggattttatttcactaaagattttattccaaaatctttctcaaatatgac-t----tttttttccccatccccattgccactaccatagtccaTGaatggttttcaaagggaggttcacgtacctcatagtatgggagggtcatccattgggatactgggagaaaatattag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 927053 459 - 2385121 aaTCAACCACTAAGAAAGGTATTCCCTCAATctacactgacatctccagcacatacctctcttataagctccagatcctcacatccccaagcgccttcttggtgcctcctgttttatgccatgttcacactggaactcgggtcattcttcccatcctccgccctcccaaatatggtccttttccagggtttcccaaaaaagtgagtgccagc---acaatggctcatcccagagacccaggagacattcaggattcccacctctccctcaccctccctatccatt--tcaccaaatggattttatttcaccaaagattttattccaaaatctttctcaaatatgactt----tttttttttccattcccattgccactaccatagtccaTGaatggttttcaaagggaggttcacgtacctcatagtatgggagggccatccattgggatactgggagaaaatattag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2372126 446 + 4274983 aaTCAACCACCAAGAAAGGTATTCCCTCAATctacactgacatctccagcacatacctctcttctaagctccagatcct--catccccaagtgccttcttggtgcctcctgtttgatgccatgttcacactggaactcgggtcattcttcccatcctccgccctcccaaatatgatccttttccagggtttcccaaaaaagtgagtgccagc---acaatggctcatcccagagacccaggagacattcaggattctcacctctccctcaccctccatatccatt--tcacc--actgattttacatca------attttattccaaaatctttctcaaatatgac-t----tttttttt--catccccattgccactaccatagtccaTGaatgtttttcaaagggaggttcacgtacctcatagtacaggagggccatccattgggatactgggagaaaatattag i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4641006 370 - 122678785 -------------------------------CCCCAGCGACGTTTCCAGCA-------CTCTTCTCAGCTCCAGACTTT--CGTCCCC-AGTTCCTCCTTGGAGCATCC---TTGATGTcatgttcacagcggaactcatggccttccttgtatcttctgcccttccaaatatagtc---ttcaggaacttcccagcac--tgggtgtcaccactacaatggttcgtcccagaaacttgggagaaatccaggattcccttctcatcctgaccctccatatccattcatcatc--aCTGTACTTGCAT-------------------------------------AC-T----GCTTTACT-----CCCTACTGCAACTACCATGGTCTGTGagtggctttccaagtgaggttcacatacccaccagtgtaagaaagcaaactattagagtacaggaagataatattag i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e otoGar3.GL873654 5511144 230 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I a score=70655.000000 s hg38.chr19_GL383574v1_alt 107052 11 + 155864 aacttctaCAt s panTro5.chr19 36174977 11 + 61309027 aacttctaCAt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39919513 11 + 64411610 aacttctaCAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6330921 11 - 8369475 aacttctaCAt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63928415 11 - 106955855 aacttctatAt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30243714 11 + 53671032 aactactatAt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34697650 11 + 59248254 aactactatAt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4566010 11 - 13342542 aactactatAt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5494354 11 + 7714307 aactactatAt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29298181 11 + 50890351 aactactatAt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 927512 11 - 2385121 aactactatAt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2372572 11 + 4274983 aactactatAt i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5511374 11 + 5549422 AATTTTAACAT i otoGar3.GL873654 I 230 C 0 s canFam3.chr1 4641376 11 - 122678785 aacttctatat i canFam3.chr1 C 0 I 2596 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I a score=43290.000000 s hg38.chr19_GL383574v1_alt 107063 6 + 155864 ttcttt s panTro5.chr19 36174988 6 + 61309027 ttcttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39919524 6 + 64411610 TTCttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6330932 6 - 8369475 ttcttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63928426 6 - 106955855 ttcttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30243725 6 + 53671032 ttcttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34697661 6 + 59248254 ttcttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4566021 6 - 13342542 ttcttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5494365 6 + 7714307 ttcttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29298192 6 + 50890351 ttcttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 927523 6 - 2385121 ttcttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2372583 6 + 4274983 ttcttt i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5511385 6 + 5549422 TTCttt i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I a score=1883.000000 s hg38.chr19_GL383574v1_alt 107069 1 + 155864 c s panTro5.chr19 36174994 1 + 61309027 c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39919530 1 + 64411610 t i panPan2.chr19 C 0 C 0 s rheMac8.chr19 30243731 1 + 53671032 c i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4566027 1 - 13342542 c i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5494371 1 + 7714307 c i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29298198 1 + 50890351 c i chlSab2.chr6 C 0 I 3 s colAng1.NW_012111697v1 2372589 1 + 4274983 c i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e otoGar3.GL873654 5511391 0 + 5549422 C e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e manLeu1.NW_012102454v1 927529 0 - 2385121 C e macFas5.chr19 34697667 0 + 59248254 C e nomLeu3.chr10 63928432 0 - 106955855 C e gorGor5.CYUI01015150v1 6330938 0 - 8369475 C a score=11549.000000 s hg38.chr19_GL383574v1_alt 107070 6 + 155864 tttttt s panTro5.chr19 36174995 6 + 61309027 tttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39919531 6 + 64411610 tttttt i panPan2.chr19 C 0 I 20 s nomLeu3.chr10 63928432 6 - 106955855 ttcttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30243732 6 + 53671032 cttttt i rheMac8.chr19 C 0 C 0 s macNem1.NW_012011689v1 4566028 6 - 13342542 cttttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5494372 6 + 7714307 cttttt i cerAty1.NW_012005268v1 C 0 I 1 s otoGar3.GL873654 5511391 5 + 5549422 -tcttt i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e chlSab2.chr6 29298199 3 + 50890351 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372590 0 + 4274983 C e manLeu1.NW_012102454v1 927529 0 - 2385121 C e macFas5.chr19 34697667 0 + 59248254 C e gorGor5.CYUI01015150v1 6330938 0 - 8369475 C a score=20411.000000 s hg38.chr19_GL383574v1_alt 107076 12 + 155864 tttttttttttt s panTro5.chr19 36175001 12 + 61309027 tttttttttttt i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63928438 12 - 106955855 tttttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30243738 11 + 53671032 -ttttttttttt i rheMac8.chr19 C 0 I 14 s macNem1.NW_012011689v1 4566034 11 - 13342542 -ttttttttttc i macNem1.NW_012011689v1 C 0 I 1 s colAng1.NW_012111697v1 2372590 12 + 4274983 cttttttttttt i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5511396 12 + 5549422 tttttttttttt i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e chlSab2.chr6 29298199 3 + 50890351 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e manLeu1.NW_012102454v1 927529 0 - 2385121 C e cerAty1.NW_012005268v1 5494378 1 + 7714307 I e macFas5.chr19 34697667 0 + 59248254 C e gorGor5.CYUI01015150v1 6330938 0 - 8369475 C e panPan2.chr19 39919537 20 + 64411610 I a score=5335.000000 s hg38.chr19_GL383574v1_alt 107088 6 + 155864 gagatg s panTro5.chr19 36175013 6 + 61309027 gagatg i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63928450 6 - 106955855 gagatg i nomLeu3.chr10 C 0 C 0 s macNem1.NW_012011689v1 4566046 6 - 13342542 gagatg i macNem1.NW_012011689v1 I 1 C 0 s colAng1.NW_012111697v1 2372602 6 + 4274983 gagatg i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5511408 5 + 5549422 gagac- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e chlSab2.chr6 29298199 3 + 50890351 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e manLeu1.NW_012102454v1 927529 0 - 2385121 C e cerAty1.NW_012005268v1 5494378 1 + 7714307 I e macFas5.chr19 34697667 0 + 59248254 C e rheMac8.chr19 30243749 14 + 53671032 I e gorGor5.CYUI01015150v1 6330938 0 - 8369475 C e panPan2.chr19 39919537 20 + 64411610 I a score=122499.000000 s hg38.chr19_GL383574v1_alt 107094 257 + 155864 gagtctcgctctgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaagctctgcctcccgggttcacacagttctcctgcctcagcctccagagtagctgggaatacaggcgtccaccaccacgcccggctaattttttgttgtatttttagtagagacggggtttcaccatgttagccaggatg---------gtctcgatctc---------ctgacctca--tgatccgcccacctcggcctcccaaagtgttgggattacagg s panTro5.chr19 36175019 257 + 61309027 gagtctcgctctgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaagctctgcctcccgggttcacacagttctcctgcctcagcctccagagtagctgggaatacaggcgtccaccaccatgcctggctaattttttgttgtatttttagtagagacggggtttcaccatgttagccaggatg---------gtctcgatctc---------ctgacctca--tgatccgcccgcctcggcctcccaaagtgttgggattacagg i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63928456 260 - 106955855 gagtctcgttctgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaagctctgcctcccgagttcacgcagttctcctgcctcaacctccagagtagctgggactacaggcgtccgccaccacgcctggctaatttttttt----ttttt----gagacggaatctcgctctgtcccccaggctggagtgcagtggcgcgatctt-------ggctcactgta--agctctgcctcccgggttctcccgagtagctgggactacagg i nomLeu3.chr10 C 0 C 0 s colAng1.NW_012111697v1 2372608 256 + 4274983 gactctcgcttcatcgccaaggtcggaatgcagtggtgcaatctcagcccactgcaatctccgcctcccaggttcaagttgttctcctgctttggccttccaagtagctgggattagaggcctctaccaccacgcctggctgactttttgt---atttttagtacagatgagatttcaccatgttggccaggctg---------gtctggagctc---------ctgacctcaggtgatcctcatgcctcagcctcccatagtgctgggattacagg i colAng1.NW_012111697v1 C 0 I 594 s otoGar3.GL873654 5511413 237 + 5549422 -agtctcactttgtcgccttcagtagagtgtgatggc---attacagctcacagcaaccttcaactcttgggcttaagcaattctcttgccttagcctcccaaatagctgggactacaggtgcctgccacaatgcccagcta-------------ttttt--tagagacgaggtctcgttatg--gctcaccctg---------gtctagaagtgcggcggggtctgtgctcaagcaatccac----------ctcccagagtgctagaattatagg i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e chlSab2.chr6 29298199 3 + 50890351 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e manLeu1.NW_012102454v1 927529 0 - 2385121 C e cerAty1.NW_012005268v1 5494378 1 + 7714307 I e macNem1.NW_012011689v1 4566052 0 - 13342542 C e macFas5.chr19 34697667 0 + 59248254 C e rheMac8.chr19 30243749 14 + 53671032 I e gorGor5.CYUI01015150v1 6330938 0 - 8369475 C e panPan2.chr19 39919537 20 + 64411610 I a score=-4810.000000 s hg38.chr19_GL383574v1_alt 107351 23 + 155864 cgtgaaccactgcacccggccTC--------------------------------------------------------------------------------------------- s panTro5.chr19 36175276 23 + 61309027 cgtgagccaccgcacccggccTC--------------------------------------------------------------------------------------------- i panTro5.chr19 C 0 C 0 s nomLeu3.chr10 63928716 23 - 106955855 tgcccgccaccatgcctggctaa--------------------------------------------------------------------------------------------- i nomLeu3.chr10 C 0 C 0 s otoGar3.GL873654 5511650 116 + 5549422 cctgagccaccatgtctgcccAAGTCGTTTTAACCTTTTTTTCtttttttttagttttttgccagggctgggtttgaacccaccacttccggcatatgtgactggcgccctaccct i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e chlSab2.chr6 29298199 3 + 50890351 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372864 594 + 4274983 I e manLeu1.NW_012102454v1 927529 0 - 2385121 C e cerAty1.NW_012005268v1 5494378 1 + 7714307 I e macNem1.NW_012011689v1 4566052 0 - 13342542 C e macFas5.chr19 34697667 0 + 59248254 C e rheMac8.chr19 30243749 14 + 53671032 I e gorGor5.CYUI01015150v1 6330938 0 - 8369475 C e panPan2.chr19 39919537 20 + 64411610 I a score=41383.000000 s hg38.chr19_GL383574v1_alt 107374 117 + 155864 ------------------tttttttttttttttt----gagatagattctcgcttcatcgccaaggctggaatacagtggcgtaatctcagctcactgcaacctctgcctcccaggttcaagttgttctcctgcttcgg s panTro5.chr19 36175299 115 + 61309027 --------------------tttttttttttttt----gagatagattctcacttcatcgccaaggctggaatacagtggcgtaatctcagctcactgcaacctctgcctcccaggttcaagttgttctcctgcttcgg i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6330938 117 - 8369475 ------------------tttttttttttttttt----gagatggagtctcgctctgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaagctctgcctcccgggttcacacagttctcctgcctcag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63928739 86 - 106955855 --------------------ttttttgtatttttagtagagacggagtttcaccgtgttagccaggatgg---------------tctcgatctcctg--acctc----------------gtgatccacccgccttgg i nomLeu3.chr10 C 0 C 0 s otoGar3.GL873654 5511766 132 + 5549422 tttgagccacaggcaccgccGttttttttttttt----gaggcagagtctcactatgtcactctgggtagagtgctgtggcg---tcacagctcacagcaacctcaacctcttggccttcagcaattctcttgcctcag i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e chlSab2.chr6 29298199 3 + 50890351 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372864 594 + 4274983 I e manLeu1.NW_012102454v1 927529 0 - 2385121 C e cerAty1.NW_012005268v1 5494378 1 + 7714307 I e macNem1.NW_012011689v1 4566052 0 - 13342542 C e macFas5.chr19 34697667 0 + 59248254 C e rheMac8.chr19 30243749 14 + 53671032 I e panPan2.chr19 39919537 20 + 64411610 I a score=16250.000000 s hg38.chr19_GL383574v1_alt 107491 66 + 155864 ccttccaagtagctgggattataggcct---ccacca-------ccacgcctggctaactttttgt---atttttagta s gorGor5.CYUI01015150v1 6331055 69 - 8369475 cctccagagtagctgggaatacaggcgt---ccacca-------ccatgcccggctaattttttgttgtatttttagta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63928825 78 - 106955855 cctcccaaagtgctaggattacaggcttgagccaccatccccagccacgcccggctaa-tttttgttgtatttttagta i nomLeu3.chr10 C 0 M 2197 s otoGar3.GL873654 5511898 65 + 5549422 cctcccaagtagctgggactacaggtgc---ctgcca--------cactcctggctattctttggttgtagttgtc--- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e chlSab2.chr6 29298199 3 + 50890351 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372864 594 + 4274983 I e manLeu1.NW_012102454v1 927529 0 - 2385121 C e cerAty1.NW_012005268v1 5494378 1 + 7714307 I e macNem1.NW_012011689v1 4566052 0 - 13342542 C e macFas5.chr19 34697667 0 + 59248254 C e rheMac8.chr19 30243749 14 + 53671032 I e panPan2.chr19 39919537 20 + 64411610 I e panTro5.chr19 36175414 0 + 61309027 C a score=5141.000000 s hg38.chr19_GL383574v1_alt 107557 112 + 155864 cagatgggatttcaccatgttag--ccaggatggtctcgatctcctgac--ctcatgatccgcccacct--cggcctcccaaagtgttgggattacaggcgt-gaaccactgcacccgg s gorGor5.CYUI01015150v1 6331124 111 - 8369475 gagacggg-tttcaccatgttag--ccaggatggtcgcgatctcctgac--ctcatgatccgcccacct--cggcctccgaaagtgttgggattacaggcgt-gagctaccatgcccgg i gorGor5.CYUI01015150v1 C 0 C 0 s otoGar3.GL873654 5511963 98 + 5549422 ---------ttgttgtttggcaggcccgggctgggttcga-aacctggcagctca-ggtgtacttggctggcgacct-----agccactgagctacaggcctggagccAAACTG----- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e chlSab2.chr6 29298199 3 + 50890351 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372864 594 + 4274983 I e manLeu1.NW_012102454v1 927529 0 - 2385121 C e cerAty1.NW_012005268v1 5494378 1 + 7714307 I e macNem1.NW_012011689v1 4566052 0 - 13342542 C e macFas5.chr19 34697667 0 + 59248254 C e rheMac8.chr19 30243749 14 + 53671032 I e nomLeu3.chr10 63928903 2197 - 106955855 M e panPan2.chr19 39919537 20 + 64411610 I e panTro5.chr19 36175414 0 + 61309027 C a score=-1080.000000 s hg38.chr19_GL383574v1_alt 107669 1 + 155864 -c s gorGor5.CYUI01015150v1 6331235 1 - 8369475 -c i gorGor5.CYUI01015150v1 C 0 C 0 s manLeu1.NW_012102454v1 927529 1 - 2385121 -c i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5512061 1 + 5549422 G- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e chlSab2.chr6 29298199 3 + 50890351 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372864 594 + 4274983 I e cerAty1.NW_012005268v1 5494378 1 + 7714307 I e macNem1.NW_012011689v1 4566052 0 - 13342542 C e macFas5.chr19 34697667 0 + 59248254 C e rheMac8.chr19 30243749 14 + 53671032 I e nomLeu3.chr10 63928903 2197 - 106955855 M e panPan2.chr19 39919537 20 + 64411610 I e panTro5.chr19 36175414 0 + 61309027 C a score=898.000000 s hg38.chr19_GL383574v1_alt 107670 2 + 155864 cT s gorGor5.CYUI01015150v1 6331236 2 - 8369475 cT i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34697667 2 + 59248254 cc i macFas5.chr19 C 0 C 0 s manLeu1.NW_012102454v1 927530 2 - 2385121 ct i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5512062 2 + 5549422 tt i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e chlSab2.chr6 29298199 3 + 50890351 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372864 594 + 4274983 I e cerAty1.NW_012005268v1 5494378 1 + 7714307 I e macNem1.NW_012011689v1 4566052 0 - 13342542 C e rheMac8.chr19 30243749 14 + 53671032 I e nomLeu3.chr10 63928903 2197 - 106955855 M e panPan2.chr19 39919537 20 + 64411610 I e panTro5.chr19 36175414 0 + 61309027 C a score=-2113.000000 s hg38.chr19_GL383574v1_alt 107672 1 + 155864 -C s gorGor5.CYUI01015150v1 6331238 1 - 8369475 -C i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34697669 1 + 59248254 -t i macFas5.chr19 C 0 I 1 s chlSab2.chr6 29298202 1 + 50890351 -t i chlSab2.chr6 I 3 I 1 s manLeu1.NW_012102454v1 927532 1 - 2385121 -t i manLeu1.NW_012102454v1 C 0 I 1 s otoGar3.GL873654 5512064 1 + 5549422 g- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372864 594 + 4274983 I e cerAty1.NW_012005268v1 5494378 1 + 7714307 I e macNem1.NW_012011689v1 4566052 0 - 13342542 C e rheMac8.chr19 30243749 14 + 53671032 I e nomLeu3.chr10 63928903 2197 - 106955855 M e panPan2.chr19 39919537 20 + 64411610 I e panTro5.chr19 36175414 0 + 61309027 C a score=19476.000000 s hg38.chr19_GL383574v1_alt 107673 16 + 155864 ----------tttttttttttttttt s gorGor5.CYUI01015150v1 6331239 15 - 8369475 ----------ttttttttttttttt- i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34697671 15 + 59248254 ----------tttttttttttttcc- i macFas5.chr19 I 1 C 0 s cerAty1.NW_012005268v1 5494379 15 + 7714307 ----------tttttttttttttcc- i cerAty1.NW_012005268v1 I 1 C 0 s chlSab2.chr6 29298204 15 + 50890351 ----------ttttttttttttccc- i chlSab2.chr6 I 1 C 0 s manLeu1.NW_012102454v1 927534 15 - 2385121 ----------ttttttttttttttc- i manLeu1.NW_012102454v1 I 1 C 0 s otoGar3.GL873654 5512065 25 + 5549422 tttttttgtttttttgttttttttt- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372864 594 + 4274983 I e macNem1.NW_012011689v1 4566052 0 - 13342542 C e rheMac8.chr19 30243749 14 + 53671032 I e nomLeu3.chr10 63928903 2197 - 106955855 M e panPan2.chr19 39919537 20 + 64411610 I e panTro5.chr19 36175414 0 + 61309027 C a score=13040.000000 s hg38.chr19_GL383574v1_alt 107689 6 + 155864 gagata s panPan2.chr19 39919557 6 + 64411610 gagata i panPan2.chr19 I 20 C 0 s gorGor5.CYUI01015150v1 6331254 6 - 8369475 gagata i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34697686 6 + 59248254 gagatg i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5494394 6 + 7714307 gagatg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29298219 6 + 50890351 gagatg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 927549 6 - 2385121 gagatg i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5512090 6 + 5549422 gagaca i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372864 594 + 4274983 I e macNem1.NW_012011689v1 4566052 0 - 13342542 C e rheMac8.chr19 30243749 14 + 53671032 I e nomLeu3.chr10 63928903 2197 - 106955855 M e panTro5.chr19 36175414 0 + 61309027 C a score=24592.000000 s hg38.chr19_GL383574v1_alt 107695 10 + 155864 gattctcgct s panPan2.chr19 39919563 10 + 64411610 gattctcact i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6331260 10 - 8369475 gattctcgct i gorGor5.CYUI01015150v1 C 0 C 0 s macFas5.chr19 34697692 10 + 59248254 gactctcgtt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4566052 10 - 13342542 gactctcgtt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5494400 10 + 7714307 gactctcgtt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29298225 10 + 50890351 gactctggtt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 927555 10 - 2385121 gactctcgtt i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5512096 10 + 5549422 gagtctcact i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372864 594 + 4274983 I e rheMac8.chr19 30243749 14 + 53671032 I e nomLeu3.chr10 63928903 2197 - 106955855 M e panTro5.chr19 36175414 0 + 61309027 C a score=281923.000000 s hg38.chr19_GL383574v1_alt 107705 85 + 155864 tcatcgccaaggctggaatacagtggcgtaatctcagctcactgcaacctctgcctcccaggttcaagttgttctcctgcttcga s panPan2.chr19 39919573 85 + 64411610 tcatcgccaaggctggaatacagtggcgtaatctcagctcactgcaacctctgcctcccaggttcaagttgttctcctgcttcgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6331270 85 - 8369475 tcatcgccaaggctggaatacagtggcgtaatctcagctcactgcaacctctgcctcccaggttcaagttgttctcctgcttcgg i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30243763 85 + 53671032 tcatcgccaaggtcggaatgcagtggtgcaatctcagctcactgcaagctccacctcccaggttcaagtcgttctcctgctttgg i rheMac8.chr19 I 14 C 0 s macFas5.chr19 34697702 85 + 59248254 tcatcgccaaggtcggaatgcagtggtgcaatctcagctcactgcaagctccacctcccaggttcaagtcgttctcctgctttgg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4566062 85 - 13342542 tcatcgccaaggtcggaatgcggtggtgcaatctcagctcactgcaagctccacctcccaggttcaagtcgttctcctgctttgg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5494410 85 + 7714307 tcatcaccaaggtcggaatgcagtggtgcaatctcagctcactgcaatctccgcctcccaggttcaagtcgttctcctgctttgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29298235 85 + 50890351 tcatcgccaaggtcggaatgcagtggtgcaatctcagctcactgcaatctccgcctcccaggttcaagttgttctcctgctttgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 927565 85 - 2385121 tcatcaccaaggtcggaatgcagtggtgcaatctcagctcactgcaatctccgcctcccaggttcaagtcgttctcctgctttgg i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5512106 82 + 5549422 gtgttgccctcagtagagtatgatggtgtcat---agctcacagcaaattcaaactcttgggcttaagcaattctcttgcctcag i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372864 594 + 4274983 I e nomLeu3.chr10 63928903 2197 - 106955855 M e panTro5.chr19 36175414 0 + 61309027 C a score=730915.000000 s hg38.chr19_GL383574v1_alt 107790 172 + 155864 ccttccaagtagctgggattataggcctccaccaccacgcctggctaacttt-----------------ttgtatttttagtacagatgggatttcaccatgttggcc----------aggctggt-ctggagctcctgacct-cagg--tgatcctcctgcctcagcctcccatagtgctgggattacaggcatgagccacc s panTro5.chr19 36175414 172 + 61309027 ccttccaagtagctgggattataggcctccaccaccacgcctggctaacttt-----------------ttgtatttttagtacagatgggatttcaccatgttggcc----------aggctggt-ctggagctcctgacct-caga--tgatcctcctgcctcagcctcacatagtgctgggattacaggcatgagccacc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39919658 172 + 64411610 ccttccaagtagctgggattataggtctccaccaccacgcctggctaacttt-----------------ttgtatttttagtacagatgggatttcaccatgttggcc----------aggctggt-ctggagctcctgacct-cagg--tgatcctcctgcctcagcctcacatagtgctgggattacaggcatgagccacc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6331355 172 - 8369475 ccttccaagtagctgggattataggcctccaccaccacgcctggctaacttt-----------------ttgtatttttagtacagatgggatttcaccatgttggcc----------aggctggt-ctggagctcctgacct-cagg--tgatcctcctgcctcagcctcccatagtgctgggattacaggcatgagccacc i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30243848 172 + 53671032 ccttccaagtagttgggattataggcctctaccaccacacctggctgacttt-----------------ttgtatttttagtacagatgagatttcaccatgttggcc----------aggctggt-ctggagctcctgacct-cagg--tgatcctcatgcctcagcctcccatagtgctgggattacaggcatgagccacc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34697787 172 + 59248254 ccttccaagtagttgggattataggcctctaccaccacacctggctgacttt-----------------ttgtatttttagtacagatgagatttcaccatgttggcc----------aggctggt-ctggagctcctgacct-cagg--tgatcctcatgcctcagcctcccatagtgctgggattacaggcatgagccacc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4566147 172 - 13342542 ccttccaagtagttgggattataggcctctaccaccacacctggctgacttt-----------------ttgtatttttagtacagatgagatttcaccatgttggcc----------aggctggt-ctggagctcctgacct-caag--tgatcctcatgcctcagcctcccatagtgctgggattacaggcatgagccacc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5494495 172 + 7714307 ccttccaagtagttgggattataggcctctaccaccacacctggctgacttt-----------------ttgtatttttagtacagatgagatttcaccatgttggcc----------aggctggt-ctggagctcctgacct-cagg--tgatcctcatgcctcagcctcccatagtgctgggattacaggcatgagccacc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29298320 174 + 50890351 ccttccaagtagttgggattataggcctctaccaccacacctggctgacttt-----------------ttgtatttttagtacagatgagatttcaccatgttggcc----------aggctggt-ctggagctcctgacct-caggcctgatcctcatgcctcagcctcccatagtgctgggattacaggcatgagccacc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 927650 172 - 2385121 ccttccaagtagttgggattataggcctctaccaccacacctggctgacttt-----------------ttgtatttttagtacagatgagatttcaccatgttggcc----------aggctggt-ctggagctcctgacct-cagg--tgattctcatgcctcagcctcccatagtgctgggattacaggcatgagccacc i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5512188 201 + 5549422 cctcccaagtagcggggactaaaggcgcccaccacaatgcccggctaatttttgttgcagctgtcattgttgtttagctggcccaggctgggtttgaactggccagcctcggtgtatgtggctgatgctgtaaccactgtgctacggg--cgatgagcccattttaacatttctaaatgtgtcgtttaatggccttaagtacc i otoGar3.GL873654 C 0 I 108 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372864 594 + 4274983 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=526109.000000 s hg38.chr19_GL383574v1_alt 107962 124 + 155864 atgcctggc---------------cC--gtctctatgtttttgactactctaggtaccttatgtaagtggaatcataggatatttgtctttgtgactgg----tttcttttggcataatatcttcaaagctcatctatTTGCATC s panTro5.chr19 36175586 124 + 61309027 atgcctggc---------------ct--gtctctatgtttttgactactctaggtaccttatgtaagtggaatcataggatatttgtctttgtgactgg----tttcttttggcataatatcttcaaagctcatctatTTGCATC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39919830 123 + 64411610 atgcctggc---------------ct--gtctctatg-ttttgactactctaggtaccttatgtaagtggaatcataggatatttgtctttgtgactgg----tttcttttggcataatatcttcaaagctcatctatTTGCATC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6331527 124 - 8369475 acgcctggc---------------cC--gtctctatgtttttgactactctaggtaccttatgtaagtggaatcataagatatttgtctttgtgactgg----tttcttttggcataatatcttcaaagctcatctatTTGCATC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30244020 130 + 53671032 acacctggc---------------cCctgtctctatgtttttgacgactctaggtaccttatgaaagtggaatcatatgatatttgtctttgtgactggtttatttcttttggcataatgtcttcaaagctcatctatTTGGACT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34697959 130 + 59248254 acacctggc---------------cCctgtctctatgtttttgacgactctaggtaccttatgaaagtggaatcatatgatatttgtctttgtgactggtttatttcttttggcataatgtcttcaaagctcatctatTTGGACT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4566319 130 - 13342542 acacctggc---------------cCctgtctctatgtttttgacgactctaggtaccttatgaaagtggaatcatatgatatttgtctttgtgactggtttatttcttttggcataatgtcttcaaagctcatctatTTGGACT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5494667 130 + 7714307 acacctggc---------------cCctgtctctatgtttttgacgactctaggtaccttatgaaagtggaatcatatgatatttgtctttgtgactggtttatttcttttggcataatgtcttcaaagctcatctatTTGGACT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29298494 130 + 50890351 acacctggc---------------cCctgtctctatgtttttgacgactctaggtaccttatgaaagtagaatcatatgatatttgtctttgtgactggtttatttcttttggcataatgtcttcaaagctcatctatTTGGACT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 927822 130 - 2385121 acacctggc---------------cCctgtctctatgtttttgacgactctaggtaccttatgaaagtggaatcatatgatatttgtctttgtgactggtttatttcttttggcataatgtcttcaaagctcatctatTTGGACT i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5512497 143 + 5549422 gtctctggcaactaccattctactttctgtctctatgtttttgaccattttatgtaactgatataagtggaatcgtgaaatatttgtttttgcaactggctttttgcatttggcataatgtcttcaaggctcattcatttgta-- i otoGar3.GL873654 I 108 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e aotNan1.NW_018505377v1 388609 170 - 4471408 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e saiBol1.JH378197 5431568 120 + 8899380 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372864 594 + 4274983 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=104737.000000 s hg38.chr19_GL383574v1_alt 108086 19 + 155864 gtagctgggattataggca s panTro5.chr19 36175710 19 + 61309027 gtagctgggattataggca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39919953 19 + 64411610 gtagctgggattataggca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6331651 19 - 8369475 gtagctgggattataggca i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30244150 19 + 53671032 gtagctgggattacaggca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34698089 19 + 59248254 gtagctgggattacaggca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4566449 19 - 13342542 gtagctgggattacaggca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5494797 19 + 7714307 gtagctggaattacaggca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29298624 19 + 50890351 gtagctgggattacaggca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 927952 19 - 2385121 gtagctgggattacaggca i manLeu1.NW_012102454v1 C 0 C 0 s saiBol1.JH378197 5431688 19 + 8899380 gtagctgggactacaggca i saiBol1.JH378197 I 120 C 0 s aotNan1.NW_018505377v1 388779 19 - 4471408 gtagctgggactacaggca i aotNan1.NW_018505377v1 I 170 C 0 s otoGar3.GL873654 5512640 3 + 5549422 -------gga--------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e calJac3.chr22 20559184 0 - 49145316 I e colAng1.NW_012111697v1 2372864 594 + 4274983 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=232281.000000 s hg38.chr19_GL383574v1_alt 108105 44 + 155864 tgcgccac-cacgcctggctgattttg-tatttttagtagag-ac-gg s panTro5.chr19 36175729 44 + 61309027 tgcgccac-cacgcctggctgattttg-tatttttagtagag-ac-gg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39919972 44 + 64411610 tgcgccac-cacgcctggctgattttg-tatttttagtagag-ac-gg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6331670 44 - 8369475 tgcgccac-cacgcctggctgattttg-tatttttagtagag-ac-gg i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30244169 44 + 53671032 tgcgccac-cacgcctggctgattttg-tatttttagtagag-at-gg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34698108 44 + 59248254 tgcgccac-cacgcctggctgattttg-tatttttagtagag-at-gg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4566468 44 - 13342542 tgcgccac-cacgcctggctgattttg-tatttttagtagag-at-gg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5494816 44 + 7714307 tgcgccac-cacgcctggctgattttg-tatttttagtagag-at-gg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29298643 45 + 50890351 tgcgccac-cacgcctggctgattttg-tatttttagtagag-atggg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 927971 44 - 2385121 tgcgccac-cacgcctggctgattttg-tatttttagtagag-at-gg i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28587625 47 + 49145316 TATgccacacacaccggattaattttgttatttttagtagagaac-aa i calJac3.chr22 I 1008 C 0 s saiBol1.JH378197 5431707 44 + 8899380 tgtgccac-cacacctggctaattttg-tatttttagtagag-ac-ag i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 388798 40 - 4471408 tgtgccac-cacacctggctaattttg-tatttttagtagag------ i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5512643 7 + 5549422 tgtgtca----------------------------------------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e colAng1.NW_012111697v1 2372864 594 + 4274983 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=2841891.000000 s hg38.chr19_GL383574v1_alt 108149 370 + 155864 ggtttc-atcatgttggtcaggctggtctcgaactcctgacctcaggtgatccacgcgccttggcct-cccaaagtgctgggattaca-ggcgtaagccacggcgcccggccTCCttc------aacgctgagtaatattctattgttatgtttataccaca-ttttgtgaacccattcacccgtggatggacattgggttgcttccaccttctgactaatatgaacatgg-----gtgtacacatTTAT----Atccactcttgcctcccctccgtagtccttccttctccacactgcatctagagtaacccctttacactctcaagtatggacaaatcacctcttgcttaaaactcattagttttgcaacactgtcaagtaagacct s panTro5.chr19 36175773 370 + 61309027 ggtttc-atcatgttggtcaggctggtctcgaactcctgacctcaggtgatccacccgccttggcct-gccaaagtgctgggattaca-ggcgtaagccacggcgcccggccTCCttc------aacgctgagtaatattctattgttatgtttataccaca-ttttgtgaacccattcacccgtggatggacattgggttgcttccaccttctgactaatatgaacatgg-----gtgtacacatTTAT----Atccactcttgcctcccctccctagtccttccttctccacactgcacctagagtaacccctttacactctcaagtatggacaaaccacctcttgcttaaaactcattagttttgcaacactgtcaagtaagacct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39920016 370 + 64411610 ggtttc-atcatgttggtcaggctggtctcgaactcctgacctcaggtgatccacccgccttggcct-gccaaagtgctgggattaca-ggcgtaagccacggcgcccggccTCCttc------aacgctgagtaatattctattgttatgtttataccaca-ttttgtgaacccattcacccgtggatggacattgggttgcttccaccttctgactaatatgaacatgg-----gtgtacacatTTAT----Atccactcttgcctcccctccctagtccttccttctccacactgcacctagagtaacccctttacactctcaagtatggacaaaccacctcttgcttaaaactcattagttttgcaacactgtcaagtaagacct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6331714 369 - 8369475 ggtttc-atcatgttggtcaggccggtctcgaactcctgacctcaggtgatccacccgccttggcct-cccaaagtgctgggattaca-ggcgtaagccacggcgcccggccTCCttc------aacgctgagtaatattctattgttatgtttataccaca-ttttgtgaacccattcacccgtggatggacattgggttgcttccaccttctgactaatatgaacatgg-----gtgtacacatTTAT----Atccactcttgcctcccctccctagtccttccttctccacactgcatccagagtaacccctttacactctcaagtatggacaaatcacctcttgc-taaaactcattagtTATGCAACACTGTCAAGTAAGACCT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30244213 366 + 53671032 ggtttc-accatgttggtcaggctggtctcgaactcctgacctcaggtgatccgcctgccttggcct-cccaaagtgctgagattaca-ggcgtgagccaccgcgcccggccTCCttc------aacactgaataatattctatcgttatgtttataccaca-ttttgtgtacccattcacccgtggatggacaatgggttgcctccatctt----ctaatatgaacatgg-----gtgtacacatTTAT----AtccactcttgcctccccttcctagtccttccttctccacactgcagctagagtaacccctttatactctcaagtatggacaaatcacctcttgcttaaaactcattagtTTTGCGACGCTGTCAAGTAAGACCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34698152 366 + 59248254 ggtttc-accatgttggtcaggctggtctcgaactcctgacctcaggtgatccgcctgccttggcct-cccaaagtgctgggattaca-ggcgtgagccaccgcgcccggccTCCttc------aacactgaataatattctatcgttatgtttataccaca-ttttgtgtacccattcacccgtggatggacaatgggttgcttccatctt----ctaatatgaacatgg-----gtgtacacatTTAT----AtccactcttgcctccccttcctagtccttccttctccacactgcagctagagtaacccctttatactctcaagtatggacaaatcacctcttgcttaaaactcattagtTTTGCGACACTGTCAAGTAAGACCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4566512 366 - 13342542 ggtttc-accatgttggtcaggctggtctcgaactcctgacctcaggtgatccgcctgccttggcct-cccaaagtgctgggattaca-ggcgtgagccaccgcgcccggccTCCttc------aacactgaataatattctatcgttatgtttataccaca-ttttgtgtacccattcacccgtggatggacaatgggttgcttccatctt----ctaatatgaacatgg-----gtgtacacatTTAT----AtccactcttgcctccccttcctagtccttccttctccacacagcagctagagtaacccctttatactctcaagtatggacaaatcacctcttgcttaaaactcattagtTTTGCGACACTGTCAAGTAAGACCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5494860 366 + 7714307 ggtttc-accatgttggtcaggctggtctcgaactcctgacctcaggtgatccgcctgccttggcct-cccaaagtgctgggattaca-ggcgtgagccaccgcgcccggccTCCttc------aacactgaataatattctatcgttatgtttataccaca-ttttgtgtacccattcacccgtggatggacagtgggttgcttccatctt----ctaatatgaacatgg-----gtatacacatttat----atccactcttgCctccccttcctagtccttccttctccacactgcagctagagtaacccctttatactctcaagtatggacaaatcacctcttgcttaaaactcattagtTTTGCGACACTGTCAAGTAAGACCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29298688 370 + 50890351 ggtttc-accatgttggtcaggctggtcttgaactcctgacctcaggtgatccacctgccttggcct-cccaaagtgctgggattaca-agcgtgagccaccgcgcccggccTCCttc------aacactgaataatattctatcgttaggtttataccacc-ttttgtgtacccattcaccagtggatggacaatgggttgcttccatcttctgactaatatgaacatgg-----gtgtacacatTTAT----AtccactcttgcctcccctccctagtccttccttctccacactgcagctagagtaacccctttacactgtcaagtatggacaaatcacctcttgcttaaaactcgttagtTTTGCGACACTGTCAGGTAAGACCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 928015 366 - 2385121 ggtttc-accatgttggtcaggctggtctcgaactcctgacctcaggtgatccgcctgccttggcct-cccaaagtgctgggattaca-ggcgtgagccaccgcgcccggccTCCttc------aacactgaataatattctatcgttatgtttataccaca-ttttgtgtacccattcacccgtggatggacaatgggttgcttccatctt----ctaatatgaacatgg-----gtgtacacatCTAT----AtccactcttgcctccccttcctagtccttccttctccacactgcagctagagtaacccctttatactctcaagtatggacaaatcacctcttgcttaaaactcattagtTTTGCGACACTGTCAAGTAAGACCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2373458 370 + 4274983 ggtttc-accatgttggtcaggctggtctcgaactcctgacctcaggtgatccacctgccttggcct-cccaaagtgttaggattaca-ggcgtgagctaccacacccggccTCCTTC------GACActgaataatattctaccgttatgtttataccaca-ttttgtgtactcattcacccgtggatggacaatgggttgcttccaccttctgactaatatgaacatgg-----gtgtacacatTTAT----AtccactcttgcctcccctccctagtccttccttctccacactgcagctagagtaacccctttacactctcaagtatggacaaatcacctcctgcttaaaactcattagtTTTGCGACACTGTCAAGTAAGATCT i colAng1.NW_012111697v1 I 594 C 0 s calJac3.chr22 28587672 369 + 49145316 agtttcttccatgttagtcaggctgatttcaaactcttg-cgtcaggtg-cccacttgccttggcctccccaaagtgctaggataacagggcatgagccactttgcctggcctctttcctttttgacgctgaataatattctattg-tatgtttataccacatttttgtgtacccattcatctgtggatggacattgggtggcttccacctt----ctaatatgaacatgg-----gtgaacacatTTAT----ATCCACTCTTGCCTCCTCTCCCTAGTCCTTCCTTCTCCACAATGCAGCTGGGGTAACCCCTTTACACTTTCAAGTATGGACAAATCACCT----CTTAAAACTCATTCGTTTTGCAACACGGTCAAGTAAGACCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5431751 370 + 8899380 agtttc-tccatgttggtcaggctggtctcaaactcttgacctcaggtgttccacttgcctcggcct-cccaaagtgctaggattaca-ggcatgagccactttgcctggcctctttcctttttaacgctgaataatattctattg-tatgtttacaccaca-ttttgtgtacccattcatccgtggatggacattgggttgcttctaccttttgactaatatgaacatgg-----gtgtacacatTTAT----Atccactcttgcctcctctctctagtccttccttctccac--tgcagctagagtaacccctttacactctcaagtatggacaaatcacctcttgcttaaaactcATTCGTTTTGCAACAGTGTCA---AAGAGCT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 388838 375 - 4471408 agtttc-tccatgttggtcaggctggtctcaaactcttgacctcaggtgatccactagcctcagcct-cccaaagtgctaggattaca-ggcgtgagccactttgcctggcctctttcctttttaatgctgaataatattctattg-tatgtttataccaca-ttttgtgtacgcattcatccgtggatggacattgggttgcttccaccttctgactaatatgaacatgg-----gtgtacaCGTTTAT----Atccactcttgcctcctctccctcgtccttccttctccacactgcagctagagtaacccctttacactctcaagtatggacaaatcacctcttgcttaaaactcaatcgttttgcaacactgtcaagtaagacct i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5512650 277 + 5549422 ------------------------------gaatttc---------------------------ctt-cctgaaattctga------a-----------------------------t------aagggtgaatagtattacattg-tgtgaccatacaaca-ttttgttcattcattcatctctggatggaca-tcagttacttc---cttttgactgttatgaatatggcagttatgaacacgggtgtacaaatccacttttgcttctcctatccag----tccttatccacactacagccagaataatcctttaaaagtcacaagtatggtcaaatcacctcttgcttaaaacaaa---gttttgcaatacactcagataagacct i otoGar3.GL873654 C 0 I 25 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=1699930.000000 s hg38.chr19_GL383574v1_alt 108519 229 + 155864 aacttctcacCACTCTGATTTATTATTGGAACACAAAACTGGGCCATGCTCCGTGGCTCA-------------agcactttgggaggccgaggtgggcggaacacctgaggtcaggagtttgagaccagcgtggccaacatggggaaatcccgtctctactaataacacaaaaattagccgggcgtggtggcgcacgcttgtaat-cgcagctatccgggaggctgaggcaggagaatcactt s panTro5.chr19 36176143 228 + 61309027 aacttctcacCACTCTGATTTATTATTAGAACACAAAACTGGGCCATGCTCCGTGGCTCA-------------agcactttgggaggccgagatgggcggaacacctgaggtcaggagtt-gagaccagcctggccaacatggcgaaatcccgtctctactaataacacaaaaattagccgggcgtggtggcgcacgcttgtaat-cgcagctattcgggaggctgaggcaggagaatcactt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39920386 228 + 64411610 aacttctcacCACTCTGATTTATTATTAGAACACAAAACTGGGCCATGCTCCGTGGCTCA-------------agcactttgggaggccgagatgggcggaacacctgaggtcaggagtt-gagaccagcctggccaacatggcgaaatcccgtctctactaataacacaaaaattagccgggcgtggtggcgcacgcttgtaat-cgcagctattcgggaggctgaggcaggagaatcactt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332083 229 - 8369475 AACTTCTCACCACTCTGATTTATTATTAGAACACAAAACTGGGCCATGCTCCGTGGCTCA-------------agcactttgggaggccgaggtgggcggaacacctgaggtcaggagtttgagaccagcctggccaacatggcgaaatcccgtctctactaataacacaaaaattagccgggcgtggtggcgcacgcttgtaat-cgcagctattcgggaggctgaggcaggagaatcactt i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30244579 241 + 53671032 GACTTCTCACCACCCTGATTTATTATTAGAACACAAAACTGggcggggctccgtggctcaagcctctaatcccagcactttgggaggccgaggcgggcggaacacctgaggtcaggagtttgagaccagcatggccaaca-ggcgaaatcccatctctactaaaaacacaaaaattagccgggcttggtggcgcacgcttgtaat-cgcagctacttgagaggctcaggcaggagaatcactt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34698518 241 + 59248254 GACTTCTCACCACCCTGATTTATTATTAGAACACAAAACTGggcggggctccgtggctcaagcctctaatcccagcactttgggaggccgaggcgggcggaacacctgaggtcaggagtttgagaccagcctggccaaca-ggcgaaatcccatctctactaaaaacacaaaaattagccgggcttggtggcgcacgcttgtaat-cgcagctacttgggaggctcaggcaggagaatcactt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4566878 241 - 13342542 GACTTCTCACCACCCTGATTTATTATTAGAACACAAAACTGggcggggctccgtggctcaagcctctaatcccagcactttgggaggccgaggcgggcggaacacctgaggtcaggagtttgagaccagcctggccaaca-ggcgaaatcccatctctactaaaaacacaaaaattagccgggcttggtggcgcacgcttgtaat-cgcagctacttgggaggctcaggcaggagaatcactt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5495226 241 + 7714307 GACTTCTCACCACCCTGATTTATTATTAGAACACAAAACTGggcggggctccgtggctcaagcctctaatcccagcactttgggaggccgaggcgggcggaacacctgaggtcaggagtttgagaccagcctggccaaca-gacgaaatcccatctctactaaaaacacaaaaattagcctggcttggtggcgcacgcttgtaat-cgcagctacttgggaggctcaggcaggagaatcactt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299058 243 + 50890351 AACTTCTCACCACCCTGATTTATTATTAGAACACAAAACTGggccaggcaccgtggctcaagcctataatcccagcactttgggaggcagaggcgggcggaacacctgaggtcaggagtttgagaccagcctggccaacatggcaaaatcccatctctactaaaaacgcaaaaattagccgggcttggtggcgcacgcttgtaatccccagctacttgggaggctcacgcaggagaatcactt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 928381 241 - 2385121 GACTTCTCACCACCCTGATTTATTATTAGAACACAAAACTGggcggggctccgtggctcaagcctctaatcccagcactttgggaggccgaggcgggcggaacacctgaggtcaggagtttgagaccagcctggccaaca-ggcgaaatcccatctctactaaaaacacaaaaattagccgggcttggtggcgcacgcttgtaat-cgcagctacttgggaggctcaggcaggagaatcactt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2373828 242 + 4274983 AACTTCTCACCACCCTGATTTATTATTAGAACACAAAACTGggccgggctccgtggctcaagcctgtaatcccagcatttagggatgtcgaagcgggcggaactcctgaggtcaggagtttgagaccagcctggccaaaacggtgaaatcccagctctactaaaaacacaaaaattagccgggcttggtggcgcacgcttgtaat-cgcagctacttgggaggctcaggcaggaaaatcactt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28588041 242 + 49145316 AACTTCTCACCCCCCTGATTTAGTATTAGAACCCAAAACTGggccgggctccgtggctcacgtctgtaataccagcactctgggaggccgaggcgggcggatcatttgaggtcaggagtttcagaccagcctggccaacatggcgaaaccccatctctaataataatacaaaaattaggggggcacggtagcaccagcttgtaat-cgcagctactcgggaggctgaggcaggagaatcactg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5432121 239 + 8899380 AACTTCTCACCACCCTGATTTAGTATTAGAACTCAAAACTGggccaggctctgtggctcacgtctgtcataccagcactctgggaggctgaggcgggcggatcacttgaggtcaggagcttgagaccagcctggccaacatggcgaaaccccatctc---taataatacaaaaattagccaggcgcagtagcaccggcttgtaat-cgcagctactcggaaggctgaggcaggagaatcactg i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 389213 242 - 4471408 aacttctcacCACCCTGATTTAGTATTAGAACCCAAAACTGggccgggctccgtggctcacgtctgtaataccagcactctgggaggccgaggcgggcggatcacttgaggtcaggagtttgagaccagcctggccaacatggcgaaaccccatctctaataataatacaaaaattagccgggcgcggtagcaccggcttgtaat-cgcagctactcaggaggctgaggcaggagaatcactg i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e otoGar3.GL873654 5512927 25 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e cebCap1.NW_016107633v1 1641576 717 - 2680843 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=748337.000000 s hg38.chr19_GL383574v1_alt 108748 101 + 155864 gaacccgggaggtggaggttgcagcgagccaagatcacgtcactgcactcca-----gcctgggcgatagagcaagactccgtct----caaacaaacaaaa--------------------CCCA---CAGA s panTro5.chr19 36176371 101 + 61309027 gaactcgggaggtggaggttgcagcgagccaagatcacgtcactgcactcca-----gcctgggcgatagagcaagactccgtct----caaacaaacaaaa--------------------CCCA---CAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39920614 101 + 64411610 gaactcgggaggtggaggttgcagcgagccaagatcacgtcactgcactcca-----gcctgggcgatagagcaagactccgtct----caaacaaacaaaa--------------------CCCA---CAGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332312 101 - 8369475 gaaccggggaggtggaggttgcagtgagtcaagatcacgtcactgcactcca-----gcctgggcgatagagcaagactccgtct----caaacaaacaaaa--------------------CCCA---CAGA i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30244820 101 + 53671032 gaacccgggaggtgcagcttgcagtgagccaagatcacgtcactgcactgca-----gcctgggcgacagagcaagactccctct----caaacaaacaaaC--------------------CCCA---GAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34698759 101 + 59248254 gaacccgggaggtgcagcttgcagtgagccaagatcacgtcactgcactgca-----gcctgggcgacagagcaagactccctct----caaacaaacaaaC--------------------CCCA---CAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567119 101 - 13342542 gaacccgggaggtgcagcttgcagtgagccaagatcacgtcactgcactgca-----gcctgggcgacagagcaagactccctct----caaacaaacaaaC--------------------CCCA---CAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5495467 105 + 7714307 gaacccgggaggtgcagcttgcagtgagccaagatcacgtcactgcactgca-----gcctgggcgacagagcaagactccgtctcaaacaaacaaacaaaC--------------------CCCA---CAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299301 105 + 50890351 gaacccgggaggtgcagcttgcagtgagccaagatcacctcactgcactgca-----gcctgggcgacagagcaagactccgtctcaaacaaacaaaCCAAC--------------------CCCA---CAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 928622 103 - 2385121 gaacccgggaggtgcagcttgcagtgagccaagatcacgtcactgcactgca-----gcctgggcgac--agcaagactccgtctcaaacaaaCCAACCAAC--------------------CCCA---CAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2374070 105 + 4274983 gaacccgggagttgcagcttgccgtgagccaagatcacgtcactgcactgca-----gcctgggcgatagagcaagactccgtctcaaacaaacaaacaaaa--------------------CCCA---CAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28588283 118 + 49145316 gaacccaggagatggaggttgtagtgagccaagatcacgccactgcacttaaccaccgcctgggcgacagagcaagactccgttt----caaaaaaaaaaaaaaaaaaaaa-----------CCCATTTCAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5432360 119 + 8899380 gaactcaggaggtagaggttgtagtgagccaagatcacgccactgcactccaccaccgccagggcgacagagcaagactccgtct----caaaaaaaaaaaaaaaaaaaaa-------aaaGCCCG---CAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1642293 126 - 2680843 gaacccagaagatgggggttgtagtgagccaagatcacgccactgcactccaccactgcctgggcgacagagcaaggctccgtct----caaaaaaaaaaaaaaacaaaaAAAAAACCAAAGCCCG---CAAA i cebCap1.NW_016107633v1 I 717 C 0 s aotNan1.NW_018505377v1 389455 109 - 4471408 gaacccaggaggtggaagttgtagtgagccaagatcacgccactgcacttcaccaccgcctggg-gacagagcaagacttcgtct----caaaaaaaaaaaaaaaG----------------CCCA---CAAA i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e otoGar3.GL873654 5512927 25 + 5549422 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=45624.000000 s hg38.chr19_GL383574v1_alt 108849 5 + 155864 ACTGG s panTro5.chr19 36176472 5 + 61309027 ACTGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39920715 5 + 64411610 ACTGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332413 5 - 8369475 ACTGG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30244921 5 + 53671032 ACTGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34698860 5 + 59248254 ACTGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567220 5 - 13342542 ACTGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5495572 5 + 7714307 ACTGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299406 5 + 50890351 ACTGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 928725 5 - 2385121 ACTGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2374175 5 + 4274983 ATTGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28588401 5 + 49145316 ACTGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5432479 5 + 8899380 ACTGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1642419 5 - 2680843 ACTGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 389564 5 - 4471408 ACTGG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5512952 5 + 5549422 aatac i otoGar3.GL873654 I 25 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e dasNov3.JH563638 375697 3967 + 643850 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=12376.000000 s hg38.chr19_GL383574v1_alt 108854 1 + 155864 A s panTro5.chr19 36176477 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39920720 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332418 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30244926 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34698865 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567225 1 - 13342542 A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5495577 1 + 7714307 A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299411 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 928730 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2374180 1 + 4274983 A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28588406 1 + 49145316 A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5432484 1 + 8899380 A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1642424 1 - 2680843 A i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 389569 1 - 4471408 A i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5512957 1 + 5549422 a i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 379664 1 + 643850 A i dasNov3.JH563638 I 3967 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e mm10.chr7 111125157 2281 - 145441459 I e canFam3.chr1 4641387 2596 - 122678785 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=440508.000000 s hg38.chr19_GL383574v1_alt 108855 43 + 155864 AGACCCTTGCTGCTGCTTCTGC--GTAATGTGTTCTCCTCCCTTC s panTro5.chr19 36176478 43 + 61309027 AGACACTTGCTGCTGCTTCTGC--GTAATGTGTTCTCCTCCCTTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39920721 43 + 64411610 AGACACTTGCTGCTGCTTCTGC--GTAATGTGTTCTCCTCCCTTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332419 43 - 8369475 AGACACTTGCTGCTTCTTCTGC--GTAACGTGTTCTCCTCCCTTC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30244927 43 + 53671032 AGACATTTGCTGTTTCTTCTGC--GTAACGTGTTTTCCTCCTTTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34698866 43 + 59248254 AGACATTTGCTGTTTCTTCTGC--GTAACGTGTTTTCCTCCTTTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567226 43 - 13342542 AGACATTTGCTGTTTCTTCTGC--GTAACGTGTTTTCCTCCTTTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5495578 43 + 7714307 AGACATTTGCTGTTTCTTCTGC--GTAACGTGTTTTCCTCCTTTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299412 43 + 50890351 AGACATTTGCTGTTTCTTCTGC--GTAACGTGTTTTCCTCCTTTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 928731 43 - 2385121 AGACATTTGCTGTTTCTTCTGC--GTAACGTGTTTTCCTCCTTTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2374181 43 + 4274983 AGATATTTGCTGTTTCTTCTGA--GCAACACGTTTTCCTCCTTTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28588407 43 + 49145316 AAACACTTGCTGTTTCTTCTGT--GTAATGTGTTTTTCTCCCTTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5432485 43 + 8899380 AAACACTTGCTGTTTCTTCTGT--GTAATGTGTTTTCCTCCCTTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1642425 43 - 2680843 AAACACTTGCTGTTTCTTCTGT--GTAATGTGTTTTCCTCCCTTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 389570 43 - 4471408 AAACACTTGCTGTTTCTTCTGT--GTAATGTGTTTTCCTCCCTTC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5512958 44 + 5549422 agatagttgctgctgctgctgc-tgtaatttcttttcctcctttc i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4643983 41 - 122678785 AGACACCTGCCGTTTCTTCTGCCCTCACCGGGCCTCCCTCT---- i canFam3.chr1 I 2596 C 0 s dasNov3.JH563638 379665 44 + 643850 AAACAACTGCTCTTTCTTCTGC-TACAATGTCCTTCCCTCCCTTC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e mm10.chr7 111125157 2281 - 145441459 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=120294.000000 s hg38.chr19_GL383574v1_alt 108898 40 + 155864 TC--G-----tttttttttttttttttCTCCCTTCTACCCCTTAGGA s panTro5.chr19 36176521 42 + 61309027 TC--GGt---tttttttttttttttttCTCCCTTCTACCCCTTAGGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39920764 39 + 64411610 TC--G------TTTTTTTTTTTTTTTTCTCCCTTCTACCCCTTAGGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332462 40 - 8369475 TC--G-----tttttttttttttttttCTCCCTTCTACCCCTTAGGA i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30244970 35 + 53671032 TCCAG------------TTTTTTTTTTCTCCCTTCTACCCCTTAGGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34698909 35 + 59248254 TCCAG------------TTTTTTTTTTCTCCCTTCTACCCCTTAGGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567269 35 - 13342542 TCCAG------------TTTTTTTTTGCTCCCTTCTACCCCTTAGGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5495621 36 + 7714307 TCCAG-----------TTTTTTTTTTTCTCCCTTCTACCCCTTAGGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299455 37 + 50890351 TCCAG----------TTTTTTTTTTTTCTCCCTTCTACCCCTTAGGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 928774 37 - 2385121 TCCAG----------TTTTTTTTTTTTCTCCCTTCTACCCCTTAGGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2374224 37 + 4274983 TCCAG----------TTATTTTTTTTTCTCCCTTCTACCCCTTAGGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28588450 12 + 49145316 TC-----------------------------------CCCTTTAGGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5432528 12 + 8899380 TC-----------------------------------CCCTTTATGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1642468 12 - 2680843 TC-----------------------------------CCCTTTAGGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 389613 14 - 4471408 TC--G-------------------------------AACCCAAAGGA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5513002 38 + 5549422 tccAG---------TTTATTTTTTTTTCCCCCTTCTCCCCTTTAGGA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111127438 40 - 145441459 ------TCC-ttttttttttttttttttttcctttttcttttAGGGA i mm10.chr7 I 2281 C 0 s canFam3.chr1 4644024 40 - 122678785 -------CTGCGTCTGCAAGTTGTTTTCTTCCTTCTCCCCTCGGAGG i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 379709 32 + 643850 ---------------TTCTCCAAGTGTTGTTTTTCTTCCCTTTAGGA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e micMur3.chr22 3984311 1099 - 30143674 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=314204.000000 s hg38.chr19_GL383574v1_alt 108938 41 + 155864 CCTCAGCTCCTGCTCTTTCCCTGG-----GGG--AA-----TTCCGGATCACT s panTro5.chr19 36176563 41 + 61309027 CCTCAGCTCCTGCTCTTTCCCTGG-----GGG--AA-----TTCCGGATCACT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39920803 41 + 64411610 CCTCAGCTCCTGCTCTTTCCCTGG-----GGG--AA-----TTCCGGATCACT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332502 41 - 8369475 CCTCAGCTCCTGCTCTTTCCCTGG-----GGG--AA-----TTCCGGATCACT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245005 41 + 53671032 CCTCAGCTCCTGCTCTTTCCCTGG-----GGG--AA-----TTCCGGCTCAGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34698944 41 + 59248254 CCTCAGCTCCTGCTCTTTCCCTGG-----GGG--AA-----TTCCGGCTCAGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567304 41 - 13342542 CCTCAGCTCCTGCTCTTTCCCTGG-----GGG--AA-----TTCCGGCTCAGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5495657 41 + 7714307 CCTCAGCTCCTGCTCTTTCCCTGG-----GGG--AA-----TTCCGGCTCAGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299492 41 + 50890351 CCTCAGCTCCTGCTCTTTCCCTGG-----GGG--AA-----TTCCGGCTGAGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 928811 41 - 2385121 CCTCAGCTCCTGCTCTTTCCCTGG-----GGG--AA-----TTCCGGCTCAGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2374261 41 + 4274983 CCTCAGCTCCTGCTCTTTCCTTGG-----GGG--AA-----TTCCGGATCAGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28588462 31 + 49145316 CCTTAGCTCCTG----------GG-----GGA--AT-----TCCCGGATCACC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5432540 23 + 8899380 --------CCTG----------GG-----GAA--AT-----TCCCGGATCACC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1642480 31 - 2680843 CCTCAGCTCCTG----------GG-----GGA--AT-----TCCCGGATCACC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 389627 31 - 4471408 CCTCAGCTCCTG----------GG-----GGA--AT-----TCCCGGATCACC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3985410 46 - 30143674 CCTCAGCTCCTGCTCTTTTCCTGG-----GGG--AAGGAGTTCCCTGCTCACC i micMur3.chr22 I 1099 C 0 s otoGar3.GL873654 5513040 45 + 5549422 TCTCAGTTCTTGCTCTTTTCCTAG-----GGG--AA-GAATTCCCTGATCACC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111127478 43 - 145441459 TCTTAGCTCTTGATCTAACCCGGA-----GGGTAAT-----TATCTGGACATC i mm10.chr7 C 0 C 0 s canFam3.chr1 4644065 46 - 122678785 CCTGAGCTCCCGCTCTCCGTCCGGGGCCAGGA--GG-----TCCCCGATGACC i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 379741 18 + 643850 TCTCAGCTTCTGATCACT----------------------------------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 599175 875 + 2501019 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=597552.000000 s hg38.chr19_GL383574v1_alt 108979 46 + 155864 -CTCCTTT----ACTAGGTCAGGGTACTctctccctccct-cttactctttc s panTro5.chr19 36176604 46 + 61309027 -CTCCTCT----ACTAGGTCAGGGTACTctctccctccct-cttactctttc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39920844 46 + 64411610 -CTCCTCT----ACTAGGTCAGGGTACTctctccctccct-cttactctttc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332543 46 - 8369475 -CTCCTCT----ACTAGGTCAGGGTACTCTCTCCCTCCCT-CTTACTCTTTC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245046 42 + 53671032 -CTCCCCT----ACTAGGTCAGGGTa----ctccctccct-cttactctttc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34698985 42 + 59248254 -CTCCCCT----ACTAGGTCAGGGTa----ctccctccct-cttactctttc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567345 42 - 13342542 -CTCCCCT----ACTAGGTCAGGGTA----CTCCCTCCCT-CTTACTCTTTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5495698 42 + 7714307 -CTCCCCT----ACTAGGTCAGGGTa----ctccctccct-cttactctttc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299533 42 + 50890351 -CTCCCCT----ACTAGATCAGGGTa----ctccccccct-cttactctttc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 928852 42 - 2385121 -CTCCCCT----ACTAGGTCAGGGTa----ctccctccct-cttactctttc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2374302 42 + 4274983 -CTCCCCT----ACTAGGTCAGGGTa----ctccctccct-cttactctttc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28588493 46 + 49145316 -CTCCTCCACTAACTAGGTCAGGGTA----CTCCCTCCCT-CTTACTCTTTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5432563 50 + 8899380 -CTCCTCCACTAACTAGGTCAGGGTACTCTCTCTCTCCCT-CTTACTCTTTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1642511 50 - 2680843 -CTCCTTCACTAACTAGGTCAGGGTACTCTCTCCCTCCCT-CTTACTCTTTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 389658 50 - 4471408 -CTCCTCCACTAACTAGGTCAGGGTACTCTCTCCCTCCCT-CTTACTCTTTC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3985456 47 - 30143674 -CTCCTTC----ACTAGGCCAGGGGGCTCCCTCCCTCCCTGTTTACCCTTTC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 600050 46 + 2501019 -CTCCTTC----ACTAGGTCAGGGGACTCCCTCCTTCCCT-CTTACACTCTC i proCoq1.NW_012149263v1 I 875 C 0 s otoGar3.GL873654 5513085 46 + 5549422 -GTCCTTC----ACTAGGTCAAGGTACTTTCTCACTCCCT-CTTACACTTTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111127521 46 - 145441459 -CACTTCC----ATTGGGTCGGGGTACTCTCTCCTTCTCT-CTTCTACTTTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4644111 45 - 122678785 -CCCCCAC----ACTAGGTCAGGGGACTCTC-CACCCCCC-CTTCCACTTTC i canFam3.chr1 C 0 M 992 s dasNov3.JH563638 379759 47 + 643850 TTCCTTCT----GCAAGGTTAGGGGATTCTCTCCCTCCCT-CTTCCACTTTC i dasNov3.JH563638 C 0 C 0 e nomLeu3.chr10 63928903 2197 - 106955855 M a score=327245.000000 s hg38.chr19_GL383574v1_alt 109025 19 + 155864 ---ccctcctaccacttgtcac s panTro5.chr19 36176650 19 + 61309027 ---ccctcctaccacttgtcac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39920890 19 + 64411610 ---ccctcctaccacttgtcac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332589 19 - 8369475 ---CCCTCCTACCACTTGTCAC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245088 19 + 53671032 ---ccctcctaccacttgtcac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699027 19 + 59248254 ---ccctcctaccacttgtcac i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567387 19 - 13342542 ---CCCTCCTACCACTTGTCAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5495740 19 + 7714307 ---ccctcctaccacttgtcac i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299575 19 + 50890351 ---ccctcctaccacttgtcac i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 928894 19 - 2385121 ---ccctcctaccacttgtcac i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2374344 19 + 4274983 ---cccttctaccacttgtcac i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28588539 19 + 49145316 ---CCCTCCTACCACTTGTCAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5432613 19 + 8899380 ---CCCTCCTACCACTTGTCAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1642561 19 - 2680843 ---CCCTCCTACCACTTGTCAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 389708 19 - 4471408 ---CCCTCCTACCACTTGTCAC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3985503 19 - 30143674 ---CCCTCCTACCACTTGTCAC i micMur3.chr22 C 0 I 306 s proCoq1.NW_012149263v1 600096 19 + 2501019 ---CCCTCCTACCACTTGTCAC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5513131 19 + 5549422 ---CCCTCCTACCACTTGTCAC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111127567 19 - 145441459 ---CCCTCCTACCATCTGCCAC i mm10.chr7 C 0 C 0 s dasNov3.JH563638 379806 22 + 643850 CTTTCCCACTACCACTTGTCAC i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4644156 992 - 122678785 M e nomLeu3.chr10 63928903 2197 - 106955855 M a score=1161738.000000 s hg38.chr19_GL383574v1_alt 109044 103 + 155864 cattggtactatattatcacccggatatgtgacaatggtattgtgtatttaccactaaggaataaacttatgagggagagagcacta-cccgttcctgcagtgc s panTro5.chr19 36176669 103 + 61309027 cattggtactatattatcacccggatatgtgacaatggtattgtgtatttaccactaaggaataaacttatgagggagagagcacta-cccgttcctgcagtgc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39920909 103 + 64411610 cattggtactatattatcacccggatatgtgacaatggtattgtgtatttaccactaaggaataaacttatgagggagagagcacta-cccgttcctgcagtgc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332608 103 - 8369475 CATTGGTACTATATTATCACCCGGATATGTGACAATGGTATTGTGTATTTACCACTAAGGAATAAACTTATGAGGGAGAGAGCACTA-CCCGTTCCTGCAGTGC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245107 103 + 53671032 cattggtactatattatcacccggatttgtgacaatggtattgtgtgtttaccactaaggaataaacttatgagggagagagcacta-ccgtttcctgcagtgc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699046 103 + 59248254 cattggtactatattatcacccggatttgtgacaatggtattgtgtgtttaccattaaggaataaacttatgagggagagagcacta-ccgtttcctgcagtgc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567406 103 - 13342542 CATTGGTACTATATTATCACCCGGATTTGTGACAATGGTATTGTGTGTTTACCACTAAGGAATAAACTTATGAGGGAGAGAGCACTA-CCGTTTCCTGCAGTGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5495759 103 + 7714307 cattggtactgtattatcacccggatttgtgacaatggtattgtgtgtttaccactaaggaataaacttatgagggagagagcacta-ccggttcctgcagtgc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299594 103 + 50890351 cattggtactatattatcacctggatttgtgacaatggtattgtgtgtttaccactaaggaataaacttatgagggagagagcacta-ccggttcctgcagtgc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 928913 103 - 2385121 cattggtactatattatcacccggatttgtgacaatggtattgtgtgtttaccactaaggaataaacttatgagggagagagcacta-ccggttcctgcagtgc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2374363 103 + 4274983 cattggtactatattatcacccggatttgtgacaatggtattgtgtgtttaccactaaggaaaaaacctatgagggagagaGCACTA-CCCGTTCCTGCAGTGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28588558 103 + 49145316 CATTGGTAATATATTATCACCCGGATTTGTGACAATGGTATTGTGTGTTTACCACTAAGGAATAAACTTATGTCGGAGACAGCTCTA-CCCGTTCATGCAGTGC i calJac3.chr22 C 0 I 10 s saiBol1.JH378197 5432632 103 + 8899380 CATTGGTAATATATTATCACCCGGATTTGTGACAATGGTATTGTGTGTTTACCACTAAGGAATAAACCTATGTCGGAGACAGCACTA-CCCGTTCCTGCAGTGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1642580 103 - 2680843 CATTGGTAATATATTATCACCCGGATTTGTGACAATGGTATTGTGTGTTTACCATTGAGGAATAAACCTATGTCGGAGACAGCACTA-CCCGTTCCTGCAGTGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 389727 103 - 4471408 CATTGGTAATATATTATCACCCGGATTTGTGACAATGGTATTGTGTGTTTACCATTAAGGAATAAACCTATGTCAGAGACAGCACTA-CCCGTTCCTGCAGTGC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 600115 102 + 2501019 AACTGGCACGACAGTATC--ACGAATTTGTGACAATTGTATTGTGTTTCAACCACTAGAGAATAAACCTGTGAGGGTAAGAGCACTATCCGGTAACTACAGCGC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5513150 104 + 5549422 AATTGGCACTACAGTAGCATACGAACTTGTGACGATTGTATTGTGCTTCAACCACCAGAGAATAAACCTATGAGTGAAAGAGCACTATCCGGCAACTACAGTGC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111127586 104 - 145441459 AAATGGCACTACATCATTACAGTGATTTGTGACAGTAGTATTCTGTTGGCACCGCTCACGAAGCAATCCCTGAGGGTGCTAGTACTATCCCGCTCCTACATCGT i mm10.chr7 C 0 C 0 s dasNov3.JH563638 379828 78 + 643850 AATTGGCACTATATTATTACAGGGAGTTGTGAC---TTAATTTTGTCTCCATCACCAGAGAATAC-----------------------ACCGTTCCTACAGTGC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3985522 306 - 30143674 I e canFam3.chr1 4644156 992 - 122678785 M e nomLeu3.chr10 63928903 2197 - 106955855 M a score=229157.000000 s hg38.chr19_GL383574v1_alt 109147 19 + 155864 ccgtcggggcctggcatct s panTro5.chr19 36176772 19 + 61309027 ccgtcggggcctggcatct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921012 19 + 64411610 ccgtcggggcctggcatct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332711 19 - 8369475 CCGTCGGGGCCTGGCATCT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245210 19 + 53671032 ccgtcggggcctggcatct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699149 19 + 59248254 ccgtcggggcctggcatct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567509 19 - 13342542 CCGTCGGGGCCTGGCATCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5495862 19 + 7714307 ccatcggggcctggcatct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299697 19 + 50890351 ccgtcggggcctggcatct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 929016 19 - 2385121 ccgtcggggcctggcatct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2374466 19 + 4274983 CCGTCGGGGCCTGGCATCT i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5432735 19 + 8899380 CCGCCGGGGCCTGGCATCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1642683 19 - 2680843 CCGCCGGGGCCTGGCATCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 389830 19 - 4471408 CCGCCGGGGCCTGGCATCT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 600217 19 + 2501019 CTGTCAGGGCCTGGCATCC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5513254 19 + 5549422 CTGTCAGGGCCTGGCATCT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111127690 18 - 145441459 CTGTCA-GGTGTGATGTCT i mm10.chr7 C 0 C 0 s dasNov3.JH563638 379906 19 + 643850 CTGTCAAAGTCTAGCATCT i dasNov3.JH563638 C 0 M 622 e micMur3.chr22 3985522 306 - 30143674 I e canFam3.chr1 4644156 992 - 122678785 M e calJac3.chr22 28588661 10 + 49145316 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=19260.000000 s hg38.chr19_GL383574v1_alt 109166 2 + 155864 ag s panTro5.chr19 36176791 2 + 61309027 ag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921031 2 + 64411610 ag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332730 2 - 8369475 AG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245229 2 + 53671032 ag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699168 2 + 59248254 ag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567528 2 - 13342542 AG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5495881 2 + 7714307 ag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299716 2 + 50890351 ag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 929035 2 - 2385121 ag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2374485 2 + 4274983 AG i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5432754 2 + 8899380 AG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1642702 2 - 2680843 AG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 389849 2 - 4471408 AG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 600236 2 + 2501019 AT i proCoq1.NW_012149263v1 C 0 I 23 s otoGar3.GL873654 5513273 2 + 5549422 AC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111127708 2 - 145441459 AG i mm10.chr7 C 0 C 0 e micMur3.chr22 3985522 306 - 30143674 I e dasNov3.JH563638 379925 622 + 643850 M e canFam3.chr1 4644156 992 - 122678785 M e calJac3.chr22 28588661 10 + 49145316 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=167573.000000 s hg38.chr19_GL383574v1_alt 109168 34 + 155864 gaaacactccataCGCCAGTAATCGATTTCAGTC s panTro5.chr19 36176793 34 + 61309027 gaaacactccataCGCCAGTAATCGATTTCAGTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921033 34 + 64411610 gaaacactccataCGCCAGTAACCGATTTCAGTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332732 34 - 8369475 GAAACACTCCATACGCCAGTAATCGATTTCAGTC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245231 24 + 53671032 gaaacactccatGCGCCAGTAA----------TC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699170 24 + 59248254 gaaacactccatGCGCCAGTAA----------TC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567530 24 - 13342542 GAAACACTCCATGCGCCAGTAA----------TC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5495883 24 + 7714307 gaaacactccatTCGCCAGTAA----------TC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299718 24 + 50890351 gaaacactccatGCGCCAGTAA----------TC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 929037 24 - 2385121 gaaacactccatGCGCCAGTAA----------TC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2374487 24 + 4274983 GAAACCCTCCGTGCGCCAGTAA----------TC i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5432756 24 + 8899380 GAAACGCTCGATACGCCAGTAA----------TC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1642704 24 - 2680843 GAAACGCTCGATACGCCAGTAA----------TC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 389851 24 - 4471408 GAAACGCTCTATACGCCAGTAA----------CC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5513275 23 + 5549422 -AAGCGCTCAGTATTTCAGCAA----------TC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111127710 20 - 145441459 ----CGATCAATGGTTCTATCA----------TT i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 600238 23 + 2501019 I e micMur3.chr22 3985522 306 - 30143674 I e dasNov3.JH563638 379925 622 + 643850 M e canFam3.chr1 4644156 992 - 122678785 M e calJac3.chr22 28588661 10 + 49145316 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=979884.000000 s hg38.chr19_GL383574v1_alt 109202 107 + 155864 AATTTCAGTAATAAATCCAGGAGGACGCAGCCCGACCCCTCCCGCCCGGGGGCCAAGCCATGGTGGGGGATCTGGGTGGACCTCC--GGCTCTGGCCGCCAGTCCTCAA s panTro5.chr19 36176827 106 + 61309027 AATTTCAGTAATAAATCCAGGAGGACGCAGCC-GACCCCTCCCGCCCGGGGGCCAAGCCATGGTGGGGGATCTGGGTGGACCTCC--GGCTCTGGCCGCCAGTCCTCAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921067 106 + 64411610 AATTTCAGTAATAAATCCAGAAGGACGCAGCC-GACCCCTCCCGCCCGGGGGCCAAGCCATGGTGGGGGATCTGGGTGGACCTCC--GGCTCTGGCCGCCAGTCCTCAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332766 106 - 8369475 AATTTCAGTAATAAATCCAGGAGGACGCAGCC-GACCCCTCCCTCCCGGGGGCCAAGCCATGGTGGGGGATCTCGGTGGAACTCC--GGCTCTGGCCGCCAGTCCTCAA i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245255 106 + 53671032 AATTTCAGTAATAAATTCAGGAGGACGCAGAC-GACCCCTCCCGCCTGGGGACCAAGCCATGGTGGAGGATCTGCGTGGACCTCC--GGCTCTGGCCGCCGGTCCTCCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699194 106 + 59248254 AATTTCAGTAATAAATTCAGGAGGACGCAGAC-GACCCCTCCCGCCTGGGGACCAAGCCATGGTGGAGGATCTGCGTGGACCTCC--GGCTCTGGCCGCCGGTCCTCCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567554 106 - 13342542 AATTTCAGTAATAAATTCAGGAGGACGCAGAC-GACCCCTCCCGCCTGGGGACCAAGCCATGGTGGAGGATCTGCGTGGACCTCC--GGCTCTGGCCGCCGGTCCTCCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5495907 106 + 7714307 AATTTCAGTAATAAATTCAGGAGGACGCAGAC-GACCCCTCCCTCCTGGGGACCAGGCCATGGTGGAGGATCTGCGTGGACCTCC--GGCTCTGGCCGCCGGTCCTCAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299742 106 + 50890351 AATTTCAGTAATAAATTCAGGAGGACGCAGAC-GACCCCTCCCGCCTGGGGGCCAAGCCATGGTGGAGGATCTGCGTGGACCTCC--GGCTATGGCCGCCGGTCCTCAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 929061 106 - 2385121 AATTTCAGTAATAAATTCAGGAGGGCGCAGAC-GACCCTTCCCGCCTGGGGACCAAGCCATGGTGGAGGATCTGCGTGGACCTCT--GGCTCTGGCCGCCGGTCCTCAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2374511 106 + 4274983 AATTTCAATAATAAATTCAGGAGGACGCAGCG-GACCTCTCCCGCCTGGGGGACAAGCCATGGTGGAGGATCTGCGTGGACCTCC--GGCTCTGGCCGCCGGTCCTCAA i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5432780 106 + 8899380 AATTTCAGTAATAAATCCAGGAGGACGCCGCC-GACCCCTACCGCCCGGCGGCCAAGCCCTGGTGGAGAATCTGGGAAGACCTCC--GGCTCTGGCTGCCAGTCCTCAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1642728 106 - 2680843 AATTTCAGTAATAAATCCAGGAGGACGCCGCC-GACCCCTACCGCCCAGGGGCCAAGCCATGGTGGAGAATCTGGGAAGACCTTC--GACTCTGGCCACCAGTCCTCAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 389875 106 - 4471408 AATTTCAGTAATAAATCCAGGAGGACGCCGCC-GACCCGTACCGCCCGGGGGCCAAGCCATGGTGGAGAATCTGGGAAGACCTCC--GGCTCTGGCCGCCAGTCCTCAA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 600261 107 + 2501019 AATTTCAATAATAAATCCATGAGGACGCAGCC-GACCTCTCCCGCCTGGAAGCCAAGTCCTAGTGGTGGCTCTGAGCCGCCCTGC-AGGCTCTGGCTGCCAGTCCGCAA i proCoq1.NW_012149263v1 I 23 C 0 s otoGar3.GL873654 5513298 108 + 5549422 AATTTCAATAATAAATCCACGAGGACGCAGTC-AATCTCTTCCGCCTGGAAGCCAAGTCACAGTGGAGGAGCTGAGTGGCTCTGCAAGACTCTGGCTGCCAGTCCTCAA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111127730 56 - 145441459 AATTTCAATGATAAATACGCGAGGACGCAACC-GAGCCCCTCAGCAGGG--------------------------------TTCC--GACT------------------ i mm10.chr7 C 0 C 0 e micMur3.chr22 3985522 306 - 30143674 I e dasNov3.JH563638 379925 622 + 643850 M e canFam3.chr1 4644156 992 - 122678785 M e calJac3.chr22 28588661 10 + 49145316 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=448990.000000 s hg38.chr19_GL383574v1_alt 109309 55 + 155864 CCTCCGCCCCGGCCGTCCCGCTTGGG-GGCCCAGGGT-CCCAGGAGAGGAGGCTCCG s panTro5.chr19 36176933 55 + 61309027 CCTCCGCCCCGGCCGTCCCGCTTGGG-GGCCCAGGGC-CCCAGGAGAGGTGGCTCCG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921173 55 + 64411610 CCTCCGCCCCGGCCGTCCCGCTTGGG-GGCCCAGGGC-CCCAGGAGAGGAGGCTCCG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332872 55 - 8369475 CCTCCGCCCCGGCCGTCCCGCTTGGG-GGCCCAGGGT-CCCAGGAGAGGAGGCTCCG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245361 55 + 53671032 CCTCCGCCCCGGCCGTCCCGCTTGGG-GGTCCTGGGT-CCCAGGAGAGGAGGCTCCG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699300 55 + 59248254 CCTCCGCCCCGGCCGTCCCGCTTGGG-GGTCCTGGGT-CCCAGGAGAGGAGGCTCCG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567660 55 - 13342542 CCTCCGCCCCGGCCGTCCCGCTTGGG-GGTCCTGGGT-CCCAGGAGAGGAGGCTCCG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496013 55 + 7714307 CCTCCGCCCCGGCCGTCCCGCTTGGG-GGTCCTGGGT-CCCAGGAGAGGAGGCTCCG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299848 55 + 50890351 CCTCCGCCCCGGCCGTCCCGCTTGGG-GGTCCTGGGT-ACCAGGAGAGGAGGCTCCG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 929167 55 - 2385121 CCTCCGCCCCGGCCGTCCCGCTTGGG-GGTCCTGGGT-CCCAGGAGAGGAGGCTCCG i manLeu1.NW_012102454v1 C 0 I 3954 s colAng1.NW_012111697v1 2374617 55 + 4274983 CCTCCGCCCCAGCCGTCCCGCCTGGG-GGCCCTGGGT-CCCAGGAGAGGAGGCTCCG i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5432886 56 + 8899380 CCACCGTCCCGGCCATCCCTCTCGGA-AGATCGGGGTCCCCAGGAGAGAAGGCTACG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1642834 56 - 2680843 CCACCACCCCAGCCATCCCTCTCGGA-AGATCGGGGTCCCCAGGAGAGAAGGCTACG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 389981 56 - 4471408 CCACCGCCCCAGCCATCCCTCTCGGG-AGATCAGGGTCCCCAGGAGAGAAGGCTACA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 600368 56 + 2501019 CCCCCGCCCTAGCCATCTCACGTGGA-GGTCCCGGGTCCTCAGGGGAAGAGACCTAG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5513406 56 + 5549422 CCCCCGTCCTAGCCACGCCACACGGA-GGTCCCCGTTGTGCAAGGAAAGAGACCTAG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111127786 29 - 145441459 ---------------------------AGGTCTGGAA-ACAGGGAGGGAACGCAGAG i mm10.chr7 C 0 C 0 s dasNov3.JH563638 380549 57 + 643850 CTCCTGCCCTAGTTGTCCCACGTGGACGTTCCTCAGTATTCGGCGAAGGCGGCTCAG i dasNov3.JH563638 M 622 C 0 e micMur3.chr22 3985522 306 - 30143674 I e canFam3.chr1 4644156 992 - 122678785 M e calJac3.chr22 28588661 10 + 49145316 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=234212.000000 s hg38.chr19_GL383574v1_alt 109364 33 + 155864 GGGCG-CCCCCT-CCCCTCTAATGCGAGAGGAGAG s panTro5.chr19 36176988 33 + 61309027 GGGCG-CCCCCT-CCCCTCTAATGTGAGAGGAGAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921228 33 + 64411610 GGGCG-CCCCCT-CCCCTCTAATGTGAGAGGAGAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332927 31 - 8369475 GGGCG-CCCC---CCCCCTCAATGCGAGGGGAGAG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245416 33 + 53671032 CGGCG-CTCCCT-CCCCGCCAGTGCGAGGGCAGAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699355 33 + 59248254 CGGCG-CTCCCT-CCCCGCCAGTGCGAGGGCAGAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567715 33 - 13342542 CGGCG-CTCCCT-CCCCGCCAGTGCGAGGGCAGAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496068 33 + 7714307 CGGCG-CTCCCT-CTCCGCCAGTGCGAGGGCAGAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299903 33 + 50890351 GGGCG-CTCCCT-CCCCGCTAGTGCGAGGGCAGAG i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2374672 33 + 4274983 GGGCG-CTCCCT-CCCCGCTAGTGCCAGGGCAGAG i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5432942 33 + 8899380 GGGCG-CCCTCT-CCCCGCTCATGCGAGGGGAGGG i saiBol1.JH378197 C 0 M 600 s cebCap1.NW_016107633v1 1642890 33 - 2680843 GGGCG-CCCTCT-CCCCGCTCGTGCGCGGGGAGGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390037 34 - 4471408 GGGCG-CCCTCTCCCCCGCTCGTGCGAGGGGAGGG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 600424 33 + 2501019 GGGCG-CCCCCG-CCCCGCTCCTGCGAGGGGAGGA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5513462 33 + 5549422 GGTCG-CCCCCG-CCGCACTTCTGCGAGGGGAGGG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111127815 33 - 145441459 CTTCG-CCGCCG-CCCATCCAGCACGAGGGGAGGG i mm10.chr7 C 0 C 0 s dasNov3.JH563638 380606 34 + 643850 AGCCGACCCCCG-CGGGGCTCGCTGGAGAGGAGGG i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3985522 306 - 30143674 I e canFam3.chr1 4644156 992 - 122678785 M e calJac3.chr22 28588661 10 + 49145316 I e manLeu1.NW_012102454v1 929222 3954 - 2385121 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=74352.000000 s hg38.chr19_GL383574v1_alt 109397 13 + 155864 TCCGCTCTAGGCG s panTro5.chr19 36177021 13 + 61309027 TCCACTCCAGGCG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921261 13 + 64411610 TCCACTCCAGGCG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332958 13 - 8369475 TCCGCTCTAGGCG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245449 13 + 53671032 CCTGCTCCAAGCG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699388 13 + 59248254 CCTGCTCCAAGCG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567748 13 - 13342542 CCTACTCCAAGCG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496101 13 + 7714307 CCTGCTCCAAGCG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299936 13 + 50890351 CCTGCTCCAAGCG i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2374705 13 + 4274983 TCTGCTCCAAGCG i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1642923 13 - 2680843 TCCGCTGCAGGCG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390071 13 - 4471408 TCAGCTGTAGGCG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 600457 13 + 2501019 TCCACTCAGACCA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5513495 13 + 5549422 TCCACTCCAACCA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111127848 13 - 145441459 TGGGCTCCGGCCG i mm10.chr7 C 0 C 0 s dasNov3.JH563638 380640 13 + 643850 TCTGCTGGGAGCC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3985522 306 - 30143674 I e canFam3.chr1 4644156 992 - 122678785 M e saiBol1.JH378197 5432975 600 + 8899380 M e calJac3.chr22 28588661 10 + 49145316 I e manLeu1.NW_012102454v1 929222 3954 - 2385121 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=408172.000000 s hg38.chr19_GL383574v1_alt 109410 41 + 155864 CGGGATCCGCAACCTCCCC-GCGTCCGCCCGAGGCGGGGGCG s panTro5.chr19 36177034 41 + 61309027 CGGGATCCGCAGCCTCCCC-GCGTCCGCCCGAGGCGGGGGCG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921274 41 + 64411610 CGGGATCCGCAGCCTCCCC-GCGTCCGCCCGAGGCGGGGGCG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6332971 41 - 8369475 CGGGATCCGCAGCCTCCCC-GCGTCCGCCCGAGGCGGGGGCG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245462 41 + 53671032 CGGGATCCGCAGCCGCCCC-GGGTCCGCCAGAGGCGGGGGCG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699401 41 + 59248254 CGGGATCCGCAGCCGCCCC-GCGTCCGCCAGAGGCGGGGGCG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567761 41 - 13342542 CGGGATCCGCAGCCGCCCC-GCGTCCGCCAGAGGCGGGGGCG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496114 41 + 7714307 CGGGATCCGCAGCCGCCCC-GCGTCCGCCCGAGGCGGGGGCG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299949 41 + 50890351 CGGGATCCGCAGCCGCCCC-GCGTCCGCCCGAGGCGGGGGCG i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2374718 41 + 4274983 CGGGATCCGCAGCCGCCCC-GCGTCCGCCCGAGGCGGGGGCG i colAng1.NW_012111697v1 C 0 M 605 s cebCap1.NW_016107633v1 1642936 41 - 2680843 CGGGATCCGCAGCCGCCCC-GCGTCCGCCCGGGGCGGGGTCG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390084 34 - 4471408 CGGGATCCGCAGCCGC--------CCGCCCGGGGCGGGGTCG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3985828 41 - 30143674 CGGGACCCGCAGCCGCCCG-GCGTCCGCCCGGGGCGGGGGCG i micMur3.chr22 I 306 C 0 s proCoq1.NW_012149263v1 600470 41 + 2501019 CGGGATCCGCAGCCACCCG-GCGTCCGCCCGGGGCGGGGGCG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5513508 41 + 5549422 CGGGATCCGCAGCCGCCCG-GCGTCCGCCTGGGGCGGGGTCG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111127861 33 - 145441459 GGGAAACCGCAGC---------GACCGCCTggggcgggggcg i mm10.chr7 C 0 C 0 s dasNov3.JH563638 380653 42 + 643850 ACAGATCCGCGGCCGCCCCGGCGTCCGCCTAGGGCGGGGGCG i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4644156 992 - 122678785 M e saiBol1.JH378197 5432975 600 + 8899380 M e calJac3.chr22 28588661 10 + 49145316 I e manLeu1.NW_012102454v1 929222 3954 - 2385121 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=54202.000000 s hg38.chr19_GL383574v1_alt 109451 7 + 155864 GGGCCGG s panTro5.chr19 36177075 7 + 61309027 GGGCCGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921315 7 + 64411610 GGGCCGG i panPan2.chr19 C 0 M 203 s gorGor5.CYUI01015150v1 6333012 7 - 8369475 GGACCGG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245503 7 + 53671032 GGGCCGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699442 7 + 59248254 GGGCCGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567802 7 - 13342542 GGGCCGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496155 7 + 7714307 GGGCCGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299990 7 + 50890351 GGGCCGG i chlSab2.chr6 C 0 C 0 s cebCap1.NW_016107633v1 1642977 7 - 2680843 GGGCCGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390118 7 - 4471408 GGGCCGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3985869 7 - 30143674 GGGCCGG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 600511 7 + 2501019 GGGCCGG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5513549 1 + 5549422 G------ i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111127894 6 - 145441459 gggccg- i mm10.chr7 C 0 C 0 s dasNov3.JH563638 380695 7 + 643850 GGTCCGG i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4644156 992 - 122678785 M e saiBol1.JH378197 5432975 600 + 8899380 M e calJac3.chr22 28588661 10 + 49145316 I e colAng1.NW_012111697v1 2374759 605 + 4274983 M e manLeu1.NW_012102454v1 929222 3954 - 2385121 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=742153.000000 s hg38.chr19_GL383574v1_alt 109458 87 + 155864 ACCGGAGACGTAACTTCCGGTGTACACAGCCGGTCCAAggcggtgcgctgggggccggggcgcgtcgcaggtgaggagcgggcgcgg s panTro5.chr19 36177082 87 + 61309027 ACCGGAGACGTCACTTCCGGTGTACACAGCCGGTCCAAGGCGGTGCGCTGGGGGCCGGGGCGCGTCGCAGGTGAGGAGCGGGCGCGG i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6333019 87 - 8369475 ACCGGAGACGTCACTTCCGGTGTACACAGCCGGTCCAAGGCGGTGCGCTGGGGGCCGGGGCGCGTCGCAGGTGAGGAGCGGGCGCGG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245510 87 + 53671032 ACCGGATACGTCACTTCCGGTGTACACAGCCGGTCCAAGGCGGTGCGCTGGGGGCCGGGGCGCGTCGCAGGTGAGGAgcgggcgcgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699449 87 + 59248254 ACCGGATACGTCACTTCCGGTGTACACAGCCGGTCCAAggcggtgcgctgggggccggggcgcgtcgcaggtgaggagcgggcgcgg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4567809 87 - 13342542 ACCGGATACGTCACTTCCGGTGTACACAGCCGGTCCAAGGCGGTGCGCTGGGGGCCGGGGCGCGTCGCAGGTGAGGAGCGGGCGCGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496162 87 + 7714307 ACCGGATACGTCACTTCCGGTGTACACAGCCGGTCCAAggcggtgcgctgggggccggggcgcgtcgcaggtgaggagcgggcgcgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29299997 87 + 50890351 ACCGGATACGTCACTTCCGGTGTACACAGCCGGTCCAAggcggtgcgctgggggccggggcgcgtcgcaggtgaggagcgggcgcgg i chlSab2.chr6 C 0 C 0 s cebCap1.NW_016107633v1 1642984 87 - 2680843 GCCGGAGACGTCACTTCCGGTGTACACAGCCGGTCCAGGGCGGTGCGCTGGGGGCCGGGGCGCGACGCAGGTGAGGAgcgggcgcgg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390125 87 - 4471408 GCCGGAGACGTCACTTCCGGTGTACACAGCCGGTCCAGGGTGGTTCGCTGGGGGCCGGGGCGCGACGCAGGTGAGTAgcgggcgcgc i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3985876 87 - 30143674 CCGCGAGACGTCACTTCCGGTGTACACAGCCGGTCCAGGGCGGTGCGCTGGCGGCCGGGGCGCATCGCAGGTGAGGAGCGGGCGCGG i micMur3.chr22 C 0 I 100 s proCoq1.NW_012149263v1 600518 87 + 2501019 CCCCGATACGTCACTTCCGGTGTACACAGCCGGTCCAGGGCGGTGCGCTGGCGGCCGGGGCGCATCGCAGGTGAGGAGCGGGCGCAG i proCoq1.NW_012149263v1 C 0 I 1 s otoGar3.GL873654 5513550 86 + 5549422 -TCCGCGACGTCACTTCCGGTGTACACAGCCGGTCCAGGGCGGTGCGCTGGCGGCCGGGGCGCATCGCAGGTGAGGAgcgggctcag i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111127900 85 - 145441459 cccgccgACGTCACTTCCGGTGTACACAGCCGGTCC-GGGCGGTGCGCCGG-AGCCGGGGCGCTTCGCAGGTGAGGTACGGTCGCCA i mm10.chr7 C 0 I 1 s dasNov3.JH563638 380702 86 + 643850 CCCATGGACGTCACATCCGGTGTACACAGCCGGT-CGGGGCGGTACGCAGGAGGCCGGGGCGCGACGCAGGTGAGGAGTGGGCGCGG i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4644156 992 - 122678785 M e saiBol1.JH378197 5432975 600 + 8899380 M e calJac3.chr22 28588661 10 + 49145316 I e colAng1.NW_012111697v1 2374759 605 + 4274983 M e manLeu1.NW_012102454v1 929222 3954 - 2385121 I e nomLeu3.chr10 63928903 2197 - 106955855 M e panPan2.chr19 39921322 203 + 64411610 M a score=11470.000000 s hg38.chr19_GL383574v1_alt 109545 2 + 155864 cg s panTro5.chr19 36177169 2 + 61309027 CG i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6333106 2 - 8369475 CG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245597 2 + 53671032 cg i rheMac8.chr19 C 0 I 9 s macFas5.chr19 34699536 2 + 59248254 cg i macFas5.chr19 C 0 M 100 s macNem1.NW_012011689v1 4567896 2 - 13342542 CG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496249 2 + 7714307 cg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29300084 2 + 50890351 gg i chlSab2.chr6 C 0 C 0 s cebCap1.NW_016107633v1 1643071 2 - 2680843 cg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390212 2 - 4471408 cg i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 600606 2 + 2501019 TG i proCoq1.NW_012149263v1 I 1 C 0 s otoGar3.GL873654 5513637 2 + 5549422 cg i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111127986 2 - 145441459 CG i mm10.chr7 I 1 C 0 e micMur3.chr22 3985963 100 - 30143674 I e dasNov3.JH563638 380788 0 + 643850 C e canFam3.chr1 4644156 992 - 122678785 M e saiBol1.JH378197 5432975 600 + 8899380 M e calJac3.chr22 28588661 10 + 49145316 I e colAng1.NW_012111697v1 2374759 605 + 4274983 M e manLeu1.NW_012102454v1 929222 3954 - 2385121 I e nomLeu3.chr10 63928903 2197 - 106955855 M e panPan2.chr19 39921322 203 + 64411610 M a score=248569.000000 s hg38.chr19_GL383574v1_alt 109547 68 + 155864 ggcgcaggcgggggctggcgggcgg--------ggtcggg-------cggtgggcggtgggcagcggggccgcgggccgcagc s panTro5.chr19 36177171 68 + 61309027 GGCGCAGGCGGGGGTTGGCGGGCGG--------GGTCGGG-------CGGTGAGCGGTGGGCAGCGGGGCCGCGGGCCGCAGC i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6333108 68 - 8369475 GGCGCAGGCGGGGGCTGGCGGGCGG--------GGTCGGG-------CGGTGGGCGGTGGGCAGCGGGGCCGCGGGTCGCAGC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245608 76 + 53671032 ggcgcaggcgggGGCTCGCGGGCGGGGTCGGGCGGTCGGG-------CGGTGGGCGGTGGGCAGCTGGGCCGCGGGCCGCAGC i rheMac8.chr19 I 9 C 0 s macNem1.NW_012011689v1 4567898 68 - 13342542 GGCGCAGGCGGGGGCTCGCGGGCGG--------GGTCGGG-------CGGTGGGCGGTgggcagctgggccgcgggccgcagc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496251 68 + 7714307 ggcgcaggcgggggctcgcgggcgg--------ggtcggg-------cggtgggcggtgggcagctgggccgcgggccgcagc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29300086 68 + 50890351 ggcgcaggcgggggctggcgggcgg--------ggtcggg-------cggtgggcggtgggcagctgggccgcgggccgcagc i chlSab2.chr6 C 0 C 0 s cebCap1.NW_016107633v1 1643073 75 - 2680843 ggcgcaggcgggcgctggcgggcgg--------ggtcgggcgGTGGGTGGTGGGCGGTgggcagcggggccgcgggccgcagc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390214 71 - 4471408 ggcgcaggcgggcgctggcgggc-g--------ggtcggg-ggtgggtggtgggcggtgggca--ggggccgcgggcCGCAGC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 600608 53 + 2501019 GGCTCGGGCGGGTGCAGGCGGGCGG--------CGATGGG-------CGGGGGTCGGAGGGC---------------TGCAGC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5513639 53 + 5549422 ggttcgggcgggctcaggcgggcGG--------GGCTGGG-------CGGTGGGctgtgagc---------------cgtagc i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111127988 54 - 145441459 GGCTCGGGTCGGCGGGGACTGGCTA--------G---GGG-------TAGCGGGCGGCGGGTCGCAAGGGCG----------- i mm10.chr7 C 0 C 0 s dasNov3.JH563638 380788 41 + 643850 ---GTCGGC--------GCGAGCCG--------GGT-AGG-------TGGTGAGCAGTGGGC---------------TGCGGC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3985963 100 - 30143674 I e canFam3.chr1 4644156 992 - 122678785 M e saiBol1.JH378197 5432975 600 + 8899380 M e calJac3.chr22 28588661 10 + 49145316 I e colAng1.NW_012111697v1 2374759 605 + 4274983 M e manLeu1.NW_012102454v1 929222 3954 - 2385121 I e macFas5.chr19 34699538 100 + 59248254 M e nomLeu3.chr10 63928903 2197 - 106955855 M e panPan2.chr19 39921322 203 + 64411610 M a score=226466.000000 s hg38.chr19_GL383574v1_alt 109615 36 + 155864 cagggcagacggcgagacgggcccgcggggcgccgc s panTro5.chr19 36177239 36 + 61309027 CAGGGCAGACGGCGAGACGGGCCCGCGGGGCGCCGG i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6333176 36 - 8369475 CAGGGCAGACGGCGAGACGGGCCCGCGGGGCGCCGC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245684 36 + 53671032 CAGGGCTGACGGCGAGACGGGCTCGCGGGGCGCCGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699638 36 + 59248254 CAGGGCTGACGGCGAGAcgggctcgcggggcgccgc i macFas5.chr19 M 100 C 0 s macNem1.NW_012011689v1 4567966 36 - 13342542 cagggctgacggcgagacgggctcgcggggcgccgc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496319 36 + 7714307 cagggctgacggcgagacgggctcgcggggcgccgc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29300154 36 + 50890351 cagggctgacggcgagacgggctcgcggggcgccgc i chlSab2.chr6 C 0 C 0 s cebCap1.NW_016107633v1 1643148 36 - 2680843 cagggctgacggcgagactggctctcggggcgccgc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390285 36 - 4471408 CAGGGCTGACCGCGAGACTGCCTCGCGGGGCGCTGC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 600661 36 + 2501019 CGGGGTTGTCGGCTGGACGGGCTCGCGCGGCGCCGC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5513692 36 + 5549422 cggcgttggctgcgggactagttcgcggggcgccgc i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111128042 32 - 145441459 ----ACTGGCATCGAGGCGAGCTCGCGGGGTGCCGC i mm10.chr7 C 0 C 0 s dasNov3.JH563638 380829 36 + 643850 CAGAGCTGGCAACAGGACGAGCCCGTGGGGTGTGGT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3985963 100 - 30143674 I e canFam3.chr1 4644156 992 - 122678785 M e saiBol1.JH378197 5432975 600 + 8899380 M e calJac3.chr22 28588661 10 + 49145316 I e colAng1.NW_012111697v1 2374759 605 + 4274983 M e manLeu1.NW_012102454v1 929222 3954 - 2385121 I e nomLeu3.chr10 63928903 2197 - 106955855 M e panPan2.chr19 39921322 203 + 64411610 M a score=213997.000000 s hg38.chr19_GL383574v1_alt 109651 31 + 155864 tccgctcggggccgcagggcgcggggccgtg s panTro5.chr19 36177275 31 + 61309027 TCCGCTCGGGGCCGCAGGGCGCGGGGCCGTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921525 31 + 64411610 TCCGCTCGGGGCCGCAGGGCGCGGGGCCGTG i panPan2.chr19 M 203 C 0 s gorGor5.CYUI01015150v1 6333212 31 - 8369475 TCCGCTCGGGGCCGCAGGGCGAGGGGCCGTG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245720 31 + 53671032 TCCGCTCGGGGCCGCAGGGCGCGGGGACGTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699674 31 + 59248254 tccgctcggggccgcagggcgcggggacgtg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4568002 31 - 13342542 tccgctcggggccgcagggcgcggggacgTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496355 31 + 7714307 tccgctcggggccgcagggcgcggggccgtg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29300190 31 + 50890351 tccgctcggggccgcagggcgcggggccgtg i chlSab2.chr6 C 0 C 0 s cebCap1.NW_016107633v1 1643184 31 - 2680843 tccgatcggggccgcagggcgcggggccgTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390321 31 - 4471408 TCCGCTCGGGGCCGCAGGGCGAGGGGCCGTG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 600697 31 + 2501019 TCGGCTCAGGGCCGCCGGGTGCGGGGCTGCG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5513728 31 + 5549422 tgcgctcggggccgcagggtgcggggccgtg i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111128074 15 - 145441459 TTCCCTCGGCGCCGT---------------- i mm10.chr7 C 0 C 0 s dasNov3.JH563638 380865 24 + 643850 TTCCTTCGCGGCCTC-------GAGGCTGTG i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3985963 100 - 30143674 I e canFam3.chr1 4644156 992 - 122678785 M e saiBol1.JH378197 5432975 600 + 8899380 M e calJac3.chr22 28588661 10 + 49145316 I e colAng1.NW_012111697v1 2374759 605 + 4274983 M e manLeu1.NW_012102454v1 929222 3954 - 2385121 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=1301073.000000 s hg38.chr19_GL383574v1_alt 109682 153 + 155864 ggcTCCCGCCCCTTGCCCGCCCGCTGTGGAGGAC-GCCGGGCTTTGCGGGCGCTGGCCGG-CCGACGGAAGCCCGGAGGGGCCTCCTGGCGCGAACCCGGGACCTGGGGGC------GCGTCGGAGACTCGGCGGCCGCGGCACCGCAGGGGCGGGTCGGC s panTro5.chr19 36177306 154 + 61309027 GGCTCCCGCCCCTTGCCCGCCCGCTGTGGAGGAC-GCCGGGCTTTGCGGGCGCTGGCCGGGCCGACGGAAGCCCGGAGGGGCCTCCTGGCGCGAACCCGGGACCTGGGGGC------GCGTCGGAGAGTCGGCGGCCGCGGCACCGCAGGGGCGGGTCGGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921556 154 + 64411610 GGCTCCCGCCCCTTGCCCGCCCGCTGTGGAGGAC-GCCGGGCTTTGCGGGCGCTGGCCGGGCCGACGGAAGCCCGGAGGGGCCTCCTGGCGCGAACCCGGGACCTGGGGGC------GCGTCGGAGAGTCGGCGGCCGCGGCACCGCAGGGGCGGGTCGGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6333243 154 - 8369475 GGCTCCCGCCCCTTGCCCGCCCGCTGTGGAGGAC-GCCGGGCTTTGCGGGCGCTGGCCGGGCCGACGGAAGCCCGGAGGGGCCTCCTGGCGCGAACCCGGGACCTGGGGGC------GCGTCGGAGACTCGGCGGCCGCGGCACCGCAGGGGCGGGTCGGC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30245751 154 + 53671032 TTTTTTCGCCCCTTGCCCGCCCGCTGTGGAGGAC-GCCGGGCTTTGCGGGCGCTGGCCGGGCCGACGGAAGCCCGGAGGGGCCTCCTGGTGCGAACCCGGGACCTGGGGGC------GCGGCAGTGACTTGGCGGCAGCGGCACCGCAGGGGCGGGTCGGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699705 154 + 59248254 ggctcccgCCCCTTGCCCGCCCGCTGTGGAGGAC-GCCGGGCTTTGCGGGCGCTGGCCGGGCCGACGGAAGCCCGGAGGGGCCTCCTGGTGCGAACCCGGGACCTGGGGGC------GCGGCAGTGACTTGGCGGCAGCGGCACCGCAGGGGCGGGTCGGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4568033 154 - 13342542 GGCTCCCGCCCCTTGCCCGCCCGCTGTGGAGGAC-GCCGGGCTTTGCGGGCGCTGGCCGGGCCGACGGAAGCCCGGAGGGGCCTCCTGGTGCGAACCCGGGACCTGGGGGC------GCGGCAGTGACTTGGCGGCAGCGGCACCGCAGGGGCGGGTCGGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496386 154 + 7714307 ggcTCCCGCCCCTTGCCCGCCCGCTGTGGAGGAC-GCCGGGCTTTGCGGGCGCTGGCCGGGCCGACGGAAGCCTGGAGGGGCCTCCTGGTGCGAACCCGGGACCTGGGGGC------GCGGCAGTGACTTGGCGGCAGCGGCACCGCAGGGGCGGGTCGGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29300221 154 + 50890351 ggcTCCCGCCCCTTGCCCGCCCGCTGTGGAGGAC-GCCGGGCTTTGCGGGCGCTGGCCGGGCCGACGGAAGCCCGGAGGGGCCTCCTGGTGCGAACCCGGGACCTGGGGGC------GCGGCAGTGACTTGGCGGCCGCGGCACCGCAGGGGCGGGTCGGC i chlSab2.chr6 C 0 C 0 s cebCap1.NW_016107633v1 1643215 154 - 2680843 GGCTCCCGCCCCTTGCCCGCCCGCTGTGGAGGAC-GCCCGGCTTAGCGGGCGCTGGCCGGGCCGACGGAAGCCCAGAGGGGCCTCCTGGCGCGAACCCGGGACCGGGGGGC------GCGGCGGGGACTTGGCGGCGGCGGCACAGCAGGGGCGGGCCGGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390352 154 - 4471408 AGCTCCCGCCCATTACCCGCCCTCTGTGGAGGAC-GCCCGGCTTAGCGGGCGCTGGCCGGGCCGACGGAAGCCCAGAGGGGCCTCCTGGCGCGAACCAGGGACCCCGGGGC------ACGGCGGGGACCCGGCGGCGGCGGCACCGCAGGGGCGGGTCTGC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3986063 160 - 30143674 GGCTCCCGCCCCTTGCCCG-CCGCTGTGGAGACTGGCCGGGCTCCGCGGGCGCTGGCCGGGCGGACGGAAGCCCGGAGGGGCCTTCTGGCGCGTGCCCGGGACTGGGGGGCGCGGCGGCGGCGGGGGCCCCGCGGACGCCGGGCGAGAGGGGCGGGTCGGC i micMur3.chr22 I 100 C 0 s proCoq1.NW_012149263v1 600728 153 + 2501019 GTCTCCCGCCCCTTGCCCGCCCGCTGTGGAGGAC-GCCGGGCTCTGCGGGCGCTGGTCGGGCGGACGGAAGCCCGGAGGGGCCTTCTGGCGCGTGCCCGGGAC-GGGGGGC------GCGGCGGGCACCCAGCGGACGCAGGACGAGAGGGGCGGGTCGGA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5513759 136 + 5549422 ggctcccgccccttgcccgcccgctgtggaggac-gccgggctctgcgggcgctggccgggcggacggaagcctggaggggccttctggcgtgtg-ccgggac-tgggggc------gcggctgggaccctgcggacgcggggcg---------------- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111128089 116 - 145441459 ---------CCCTCGCCCGCCTGCTGTGGAGGAC-GCCGGGCTCGGCGGGCGCTGGCCGGGCGGACGGAAGCCCGGAGGGGCCTCTCGGCGCGCGCCCGGGAC---GAGAC--------------------------------CCTGAGGGGCGCGTTGGC i mm10.chr7 C 0 C 0 s dasNov3.JH563638 380889 153 + 643850 GGTTCTCGCCCCTTGCCCGGCCGCTGTGGAGGAC-GCCGGGCTCTGGGGGCGCTGGCCGGGCGGACGGAAGCCCAGAGGGACCTTCTGATGCGTACCCAAGAC-GAGGGTC------GCTGTCGGGACCCTGCGGACGCCAGGCAGGCGGAGGGAGTTGGC i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4644156 992 - 122678785 M e saiBol1.JH378197 5432975 600 + 8899380 M e calJac3.chr22 28588661 10 + 49145316 I e colAng1.NW_012111697v1 2374759 605 + 4274983 M e manLeu1.NW_012102454v1 929222 3954 - 2385121 I e nomLeu3.chr10 63928903 2197 - 106955855 M a score=965541.000000 s hg38.chr19_GL383574v1_alt 109835 106 + 155864 GCCCGTCAGGCGGGGAAAGGGG--ACGCTCCCTCGG------TTCGCCGGGGCCCGGGAGGTCGCGCTGGCGCCAGGACCCGCTCCCGGAAGCCCGCG---G------------AGGGAGGGCGGCCTG s panTro5.chr19 36177460 106 + 61309027 GCCCGTCAGGCGGGGAAAGGGG--ACGCTCCCTCGG------TTCGCCCGGGCCCGGGAGGTCGCGCTGGCGCCAGGACCCGCTCCCGGAAGCCCGCG---G------------AGGGAGGGCGGCCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921710 106 + 64411610 GCCCGTCAGGCGGGGAAAGGGG--ACGCTCCCTCGG------TTCGCCCGGGCCCGGGAGGTCGCGCTGGCGCCAGGACCCGCTCCCGGAAGCCCGCG---G------------AGGGAGGGCGGCCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6333397 106 - 8369475 GCCCGTCAGGCGGGGAAAGGGG--ACGCTCCCTCGG------TTCGCCGGGGCCCGGGAGGTCGCGCTGGCGACAGGACCCGCTCCCGGAAGCCCGCG---G------------AGGGAGGGCGGCCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63931103 106 - 106955855 GCCCGTCAGGCGGGGAAAGGGG--ACGCTCCCTCGG------GTCGCCAGGGCGCGGGAGGTCGCGCTGGCGCCGGGACCCGCTCCCGGAAGCCCGCG---G------------AGGGAGGGCGGCCTG i nomLeu3.chr10 M 2197 C 0 s rheMac8.chr19 30245905 106 + 53671032 GCCCGTCAGGCAGGGGAAGGGG--GCGCTCCCTTGG------GTCGCCGGGGCCCGGGAGGTCGCGCTGGCGCCGGGACCCGTTCCCGGAAGCCCGCG---G------------AGGGAGGGCGGCCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699859 106 + 59248254 GCCCGTCAGGCAGGGGAAGGGG--GCGCTCCTTCGG------GTCGCCGGGGCCCGGGAGGTCGCGCTGGCGCCGGGACCCGTTCCCGGAAGCCCGCG---G------------AGGGAGGGCGGCCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4568187 106 - 13342542 GCCCGTCAGGCAGGGGAAGGGG--GCGCTCCCTCGG------GTCGCCGGGGCCCGGGAGGTCGCGCTGGCGCCGGGACCCGTTCCCGGAAGCCCGCG---G------------AGGGAGGGCGGCCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496540 106 + 7714307 CCCCGTCAGGCAGGGGAAGGGG--GCGCTCCCTCGG------GTCGCCGGGGCCCGGGAGGTCGCGCTGGCGCCGGGACCCGTTCCCGGAAGCCCGCG---G------------AGGGAGGGCGGCCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29300375 106 + 50890351 GCCCGTCAGGCAGGGGAAGGGG--GCGCTCCCTCGG------GTCGCCGGGGCCCGGGAGCTCGCGCTGGCGCCGGGACCCGTTCCCGGAAGCCCGCG---G------------AGGGAGGGCGGCCTG i chlSab2.chr6 C 0 C 0 s cebCap1.NW_016107633v1 1643369 105 - 2680843 GCCCGTCAGGCGGAGAAAGGGG--GCGCTTCCTCGG------GTCGCCGGGGCCCGGGAGGTCGAGCTGGCGCCGGGACCCGCTCCCGGAAGCCCGCG---G------------AGGGA-GGCGGCCTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390506 106 - 4471408 GCCCGTCAGGCGGAGAAAGGGG--GCGCTCCCTCGG------GTCACTGGGACCCGGGAGGTCGCGCTGGTGCCGGGACCCGCTCCCGGAAGCCCGCG---G------------AGGGACAGCGGCCTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3986223 104 - 30143674 ACCGGTGGGGCGCGGGGCGGGG--GCGCTCCCTCGG------ACCGCAGGGGCCCCGG-GGTCGCGCCGGCGCCGGGACCCGCTCCCGGAAGCCCgcg----------------ggggacggcggcctg i micMur3.chr22 C 0 I 48 s proCoq1.NW_012149263v1 600881 106 + 2501019 ACCGGCCGGGCGGGGGGCGGGG--GCGCTCCCTGGG------ACCGCAGGGGCCCGGGAGGTCGGGGTGGTGCCGGGACCCGCTCCCGGAAGCCCGCG---A------------GGGGACGGCGGCCTA i proCoq1.NW_012149263v1 C 0 I 7 s otoGar3.GL873654 5513895 105 + 5549422 ---gggcgggcgtggagcgggg--gcgcttcctcgg------acc-cccaggccCGGGAGGTCGGGCTGGCGCCGGGACCGGCTCCCGGAAGCCGGCGGAGG------------AGGGACGGCGGCCTG i otoGar3.GL873654 C 0 I 7 s mm10.chr7 111128205 85 - 145441459 -----------GCTGAAGGACG--CGGCTGCCTTGG------GCCGCCGCGG----------------------GGGATCCGCTCCCGGAAGCTCGGG---GCGCCGTGCGCCCGGGGCTGGCGGCCTG i mm10.chr7 C 0 C 0 s dasNov3.JH563638 381042 126 + 643850 ACCCGTCAGCCGCTGGAGGGGGAAGCGCTCCCTCGGGCTGCCGCCGCCAGGGCCGCGGAGGTCGGGCAACCACCACGACCCACTCCCGGAAGCCCGCG---GTGCAGCCCGCCGAGGGGCGGCGGCCTG i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4644156 992 - 122678785 M e saiBol1.JH378197 5432975 600 + 8899380 M e calJac3.chr22 28588661 10 + 49145316 I e colAng1.NW_012111697v1 2374759 605 + 4274983 M e manLeu1.NW_012102454v1 929222 3954 - 2385121 I a score=600413.000000 s hg38.chr19_GL383574v1_alt 109941 75 + 155864 -------CTGGCGGCAGGGGTCCGCTGGGGCTAGCCGGGGAGGCGGCCCTCACGCCATCCCGGGGCTGCCGGGCGGGCTGCG s panTro5.chr19 36177566 75 + 61309027 -------CTGGCGGCAAGGGTCCGCTGGTGCTGGCCGGGGAGGCGGCCCTCACGCCACCCCGGGGCTGCCGGGCGGGCTGCG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921816 75 + 64411610 -------CTGGCGGCAAGGGTCCGCTGGGGCTGGCCGGGGAGGCGGCCCTCACGCCACCCCGGGGCTGCCGGGCGGGCTGCG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6333503 75 - 8369475 -------CTGGCGGCAGGGGTCCGCTGGGGCTGGCCGGGGAGGCGGCCCTCACGCCACCCCGGGGCTGCCGGGCGGGCTGCG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63931209 74 - 106955855 -------CTGGC-GCCGGGGTCCGCTGGAGCTGGCCGGGGAGGCGGCCCTCACGCCACCCCGGAGCTGCCGGGCGGGCTGCG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30246011 75 + 53671032 -------TTGACGGCTGGGGTCCGCTGGGGCTGGCGGGGGAGGCGGCCCTCACGCCACCCCGGGGCTGCCGGGCTGGTTGCG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34699965 75 + 59248254 -------TTGACGGCTGGGGTCCGCTGGGGCTGGCGGGGGAGGCGGCCCTCACGCCACCCCGGGGCTGCCGGGCTGGTTGCG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4568293 75 - 13342542 -------TTGACGGCTGGGGTCCGCTGGGGCTGGCGGGGGAGGCGGCCCTCACGCCACCCCGGGGCTGCCGGGCTGGTTGCG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496646 75 + 7714307 -------TTGACGGCCGGGGTCCGCTGGGGCTGGCGGGGGAGGCGGCCCTCACGCCACCCCGGGGCTGCCGGGCTGGCTGCG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29300481 75 + 50890351 -------TTGACGGCCGGGGTCCGCTGGGGCTGGCGGGGGAGGCGGCCCTCACGCCACCCCGGGGCTGCCGGGCTGGCTGCG i chlSab2.chr6 C 0 C 0 s cebCap1.NW_016107633v1 1643474 75 - 2680843 -------CAGGCAGCCGGGGTCCGCTGGGGCTGGCGGTGGAGGCGGCCCTCAAGTCACCCCGGGGCTACCGGGCCGTCTGCG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390612 75 - 4471408 -------CGGACGGCCAGGGTCCGCCGGGGCTGGCCGTGGAGGCGGCCCTCACGCCACCCCGGGGCTGCCGGGCCGGCTGCG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 600994 64 + 2501019 -------TTGGCGGCCGGGGTCCGCCGGGGCTGGC-GGGGAGGCGGCCCTCACGCCGCCCGGCGGCTGCACG---------- i proCoq1.NW_012149263v1 I 7 C 0 s otoGar3.GL873654 5514007 74 + 5549422 -------TTGGCGGCCGGGGTCTGCCAGGGCCGGC-GGGGGAGGCGGCCTCACGCCGCCCCGCGGTTGCCGGGCCGGTCGGT i otoGar3.GL873654 I 7 C 0 s mm10.chr7 111128290 75 - 145441459 -------TGGGCGACCTGGGTCCACGGGCACAGGCGGGCGCCGCTGCCCTCAggccgccccgcggctccccggccggccgcg i mm10.chr7 C 0 C 0 s dasNov3.JH563638 381168 82 + 643850 TGGGCAGTGGGAGACTGAGGTGCACGGGCGCTGGCAGAGGACGCGGCCCTCACGCCGCCCCGCGGCTGACCGGCTGGCTGTG i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3986327 48 - 30143674 I e canFam3.chr1 4644156 992 - 122678785 M e saiBol1.JH378197 5432975 600 + 8899380 M e calJac3.chr22 28588661 10 + 49145316 I e colAng1.NW_012111697v1 2374759 605 + 4274983 M e manLeu1.NW_012102454v1 929222 3954 - 2385121 I a score=24000.000000 s hg38.chr19_GL383574v1_alt 110016 2 + 155864 CG s panTro5.chr19 36177641 2 + 61309027 CG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921891 2 + 64411610 CG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6333578 2 - 8369475 CG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63931283 2 - 106955855 CG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30246086 2 + 53671032 CG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34700040 2 + 59248254 CG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4568368 2 - 13342542 CG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496721 2 + 7714307 CG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29300556 2 + 50890351 CG i chlSab2.chr6 C 0 C 0 s saiBol1.JH378197 5433575 2 + 8899380 CG i saiBol1.JH378197 M 600 C 0 s cebCap1.NW_016107633v1 1643549 2 - 2680843 CG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390687 2 - 4471408 CG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5514081 2 + 5549422 CG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111128365 2 - 145441459 cg i mm10.chr7 C 0 C 0 s dasNov3.JH563638 381250 2 + 643850 CG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 601058 0 + 2501019 C e micMur3.chr22 3986327 48 - 30143674 I e canFam3.chr1 4644156 992 - 122678785 M e calJac3.chr22 28588661 10 + 49145316 I e colAng1.NW_012111697v1 2374759 605 + 4274983 M e manLeu1.NW_012102454v1 929222 3954 - 2385121 I a score=416085.000000 s hg38.chr19_GL383574v1_alt 110018 43 + 155864 CACCTTC-----------CCGGCGGCGCCAGGCTGCCGAGGAACGCGCTTTTCC- s panTro5.chr19 36177643 43 + 61309027 CACCTTC-----------CCGGCGGCGCCAGGCTGCCGAGGAACGCGCTTTTCC- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921893 43 + 64411610 CACCTTC-----------CCGGCGGCGCCAGGCTGCCGAGGAACGCGCTTTTCC- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6333580 43 - 8369475 CACCTTC-----------CCGGCGGCGCCAGGCTGCCGAGGAACGCGCTTTTCC- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63931285 43 - 106955855 CACCTTC-----------CCGGCGGCGCCAGGCTGCCGAGGAACGCGCTTTTCC- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30246088 43 + 53671032 CACCTTC-----------CCGGCGGCGCCAGGCTGCCAAGGAACGCGCTTTTCC- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34700042 43 + 59248254 CACCTTC-----------CCGGCGGCGCCAGGCTGCCAAGGAACGCGCTTTTCC- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4568370 43 - 13342542 CACCTTC-----------CCGGCGGCGCCAGGCTGCCAAGGAACGCGCTTTTCC- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496723 43 + 7714307 CACCTTC-----------CCGGCGGCGCCAGGCTGCCAAGGAACGCGCTTTTCC- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29300558 43 + 50890351 CACCTTC-----------CCGGCGGCGCCAGGCTGCCAAGGAACGCGCTTTTCC- i chlSab2.chr6 C 0 C 0 s saiBol1.JH378197 5433577 43 + 8899380 CACCTTC-----------CCGGCGGCTCCGGGCTGCCGAGGAACGCCCTTTTCC- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1643551 43 - 2680843 CACCTTC-----------CCGGCGGCTCCGGGCTGCCAAGGAACGCGCTTTTCC- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390689 43 - 4471408 CACCTTC-----------CCGGCGGCTCCGGGCTGCCGAGGAACGCGCTTTTCC- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3986375 41 - 30143674 CACCTTC-----------CCCGCGGAGCCGGGCTGCCGGGG-ACGCGG-TTCCC- i micMur3.chr22 I 48 C 0 s proCoq1.NW_012149263v1 601058 43 + 2501019 CACCTTC-----------CCCGCGGTGCCGAGCTGCCGGGGAACACGGTTTTCC- i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5514083 43 + 5549422 CCCCTTC-----------GCGGCGGTGCCGAGCTGCTGAGGAACACGATTTTCC- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111128367 12 - 145441459 ccccTTC-----------CTGGC-------------------------------- i mm10.chr7 C 0 C 0 s dasNov3.JH563638 381252 54 + 643850 TACCTTCTGCCCCCCCCACACGCCGTGCC-GGCTGCGGAGCAACGCGGTTTTTCT i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4644156 992 - 122678785 M e calJac3.chr22 28588661 10 + 49145316 I e colAng1.NW_012111697v1 2374759 605 + 4274983 M e manLeu1.NW_012102454v1 929222 3954 - 2385121 I a score=215676.000000 s hg38.chr19_GL383574v1_alt 110061 18 + 155864 GGCCCTGCGGAGCCAGCT s panTro5.chr19 36177686 18 + 61309027 GGCCCTGCGGAGCCAGCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921936 18 + 64411610 GGCCCTGCGGAGCCAGCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6333623 18 - 8369475 GGCCCTGCGGAGCCAGCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63931328 18 - 106955855 GGCCCTGCGGAGCCAGCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30246131 18 + 53671032 GGCCCTGCGGAGCCCGCG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34700085 18 + 59248254 GGCCCTGCGGAGCCCGCG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4568413 18 - 13342542 GGCCCTGCGGAGCCCGCG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496766 18 + 7714307 GGCCCTGCGGAGCCCGCG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29300601 18 + 50890351 GGCCCTGCGGAGCCCGCG i chlSab2.chr6 C 0 C 0 s saiBol1.JH378197 5433620 18 + 8899380 GGCCCTGCGGAGCCCGCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1643594 18 - 2680843 GGCCCTGCGGAGCCCGCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390732 18 - 4471408 GGCCCTGCAGAGCCCGCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3986416 18 - 30143674 AGCCCTGCCGAGCCCGCT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 601101 18 + 2501019 AGCCGTGCCGAGCCCGCT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5514126 18 + 5549422 GGCCCTGCGGAACTCGCT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111128379 16 - 145441459 --TCCCTCTGAGCCCGTG i mm10.chr7 C 0 C 0 s canFam3.chr1 4645151 18 - 122678785 GGCCGTACGGAGCCTGCA i canFam3.chr1 M 992 C 0 s dasNov3.JH563638 381306 18 + 643850 GGCCCTGCTGAGCCCGTG i dasNov3.JH563638 C 0 C 0 e calJac3.chr22 28588661 10 + 49145316 I e colAng1.NW_012111697v1 2374759 605 + 4274983 M e manLeu1.NW_012102454v1 929222 3954 - 2385121 I a score=130372.000000 s hg38.chr19_GL383574v1_alt 110079 17 + 155864 GGCGCATT--GGGCCCGA-G s panTro5.chr19 36177704 17 + 61309027 GGCGCATT--GGGCCCGA-G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921954 17 + 64411610 GGCGCATT--GGGCCCGA-G i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6333641 17 - 8369475 GGCGCATT--GGGCCGGA-G i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63931346 17 - 106955855 GGCGCATT--GGGCCCGA-G i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30246149 16 + 53671032 GGCGCATT--GGGCCCGA-- i rheMac8.chr19 C 0 I 1 s macFas5.chr19 34700103 16 + 59248254 GGCGCATT--GGGCCCGA-- i macFas5.chr19 C 0 I 1 s macNem1.NW_012011689v1 4568431 16 - 13342542 GGCGCATT--GGGCCCGA-- i macNem1.NW_012011689v1 C 0 I 1 s cerAty1.NW_012005268v1 5496784 16 + 7714307 GGCGCATT--GGGCCCGA-- i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29300619 16 + 50890351 GGCGCATT--GGGCCCGA-- i chlSab2.chr6 C 0 I 1 s colAng1.NW_012111697v1 2375372 17 + 4274983 GGCGCATT--GGGCCCGAG- i colAng1.NW_012111697v1 M 605 C 0 s saiBol1.JH378197 5433638 16 + 8899380 GGCGCATT--GGGCCGGA-- i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107633v1 1643612 16 - 2680843 GGCGCATT--GGGCCGGA-- i cebCap1.NW_016107633v1 C 0 I 1 s aotNan1.NW_018505377v1 390750 16 - 4471408 GGCGCATT--GGGCCGGA-- i aotNan1.NW_018505377v1 C 0 I 1 s micMur3.chr22 3986434 16 - 30143674 GGCGCCGT--GGGGCCGA-- i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 601119 16 + 2501019 GGGGCAGT--GGGGCCGA-- i proCoq1.NW_012149263v1 C 0 I 1 s otoGar3.GL873654 5514144 16 + 5549422 GGCGGACT--GGGGCCGA-- i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111128395 17 - 145441459 GGCGCGGCGGGGGTCAG--- i mm10.chr7 C 0 I 1 s canFam3.chr1 4645169 16 - 122678785 GGCCCAGT--CCGGCCGC-- i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 381324 13 + 643850 GGCGCAGT--CCGGT----- i dasNov3.JH563638 C 0 C 0 e calJac3.chr22 28588661 10 + 49145316 I e manLeu1.NW_012102454v1 929222 3954 - 2385121 I a score=2352847.000000 s hg38.chr19_GL383574v1_alt 110096 157 + 155864 GGG----AGGGTCCGCGGGGA-CCGGgagggccggg-gctgagcgtggaggacccgagcccga-gggacgagcgc-agagTCAGGGGTGTGTCTTTCTGCGCCGCGCGGTGC--GAGGAAAGAAGCGTGCCTGGTTGGCATGATAAGAATTTTGTTTAGACTTTTTA s panTro5.chr19 36177721 155 + 61309027 GG-----AGGGTCCGCGGGGA-CCGGGAGGGCCGGG-GCTGAGCGTGGAGGACCCGAGCCCGA-GGGACGAGCGC--GAGTCAGGGGTGTGTCTTCCTGCGCCGCGCGGTGC--GAGGAAAGAAGCGTGCCTGGTTGGCATGATAAGAATTTTGTTTAGACTTTTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39921971 155 + 64411610 GG-----AGGGTCCGCGGGGA-CCGGGAGGGCCGGG-GCTGAGCGTGGAGGACCCGAGCCCGA-GGGACGAGCGC--GAGTCAGGGGTGTGTCTTCCTGCGCCGCGCGGTGC--GAGGAAAGAAGCGTGCCTGGTTGGCATGATAAGAATTTTGTTTAGACTTTTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6333658 156 - 8369475 GG-----AGGGTCCGCGGGGA-CCGGGAGGGCCGGG-GCTGAGCGTGGAGGACCCGAGCCCGA-GGGACGAGCGC-AGAGTCAGGGGTGTGTCTTCCTGCGCCGCTCGGTGC--GAGGAAAGAAGCGTGCCTGGTTGGCATGATAAGAATTTTGTTTAGACTTTTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63931363 156 - 106955855 GG-----AGGGTCCGCGGGGA-CCGGGAGGGCCGGG-GCTGAGCGTGGAGGACCCGAGCCCGA-TGGGCGAGCGC-AGAGTCAGGGGTGTGTCTTCCTGCGCCGCGCGGTGG--GAGGAAAGAAGCGTGCCTGGTTGGCATGATAAGAATTTTGTTTAGACTTTTTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30246166 156 + 53671032 GG-----AGGGTCCGCGGGGA-CCGGGAGGGCCGGG-GCTGAGCGTGGAGGACCCGAGCCCAA-GGGGCGAGCGC-AGAGTCAGGGGTGTGTCTTCCTGCGCCGCACGGTGC--GAGGAAAGGAGCATGCCTGGTTGGCATGATAAGAATTTTGTTTAGACTTTTCA i rheMac8.chr19 I 1 C 0 s macFas5.chr19 34700120 156 + 59248254 GG-----AGGGTCCGCGGGGA-CCGGGAGGGCCGGG-GCTGAGCGTGGAGGACCCGAGCCCAA-GGGGCGAGCGC-AGAGTCAGGGGTGTGTCTTCCTGCGCCGCACGGTGC--GAGGAAAGGAGCATGCCTGGTTGGCATGATAAGAATTTTGTTTAGACTTTTCA i macFas5.chr19 I 1 C 0 s macNem1.NW_012011689v1 4568448 156 - 13342542 GG-----AGGGTCCGCGGGGA-CCGGGAGGGCCGGG-GCTGAGCGTGGAGGACCCGAGCCCCA-GGGGCGAGCGC-AGAGTCAGGGGTGTGTCTTCCTGCGCCGCACGGTGC--GAGGAAAGGAGCATGCCTGGTTGGCATGATAAGAATTTTGTTTAGACTTTTCA i macNem1.NW_012011689v1 I 1 C 0 s cerAty1.NW_012005268v1 5496801 156 + 7714307 GG-----AGGGTCCGCGGGGA-CCGGGAGGGCCGGG-GCTGAGCGTGGAGGACCCGAGCCCAA-GGGGCGAGCGC-AGAGTCAGGGGTGTGTCTTCCTGCGCCGCACGGTGC--GAGGAAAGGAGCATGCCTGGTTGGCATGATAAGAATTTTGTTTAGACTTTGCA i cerAty1.NW_012005268v1 I 1 C 0 s chlSab2.chr6 29300636 156 + 50890351 GG-----AGGGTCCGCGGGGA-CCGGGAGGGCCGGG-GCTGAGCGTGGAGGACCCGAGCCCAA-GGGGCGAGCGC-AGAGTCAGGGGTGTGTCTTCCTGCGCCGCACGGTGC--GAGGAAAGGAGCATGCCTGGTTGGCATGATAAGAATTTTGTTTAGACTTTTCA i chlSab2.chr6 I 1 C 0 s manLeu1.NW_012102454v1 933176 156 - 2385121 GG-----AGGGTCCGCGGGGA-CCGGGAGGGCCGGG-GCTGAGCGTGGAGGACCCGAGCTCAA-GGGGCGAGCGC-AGAGTCAGGGGTGTGTCTTCCTGCGCCGCACGGTGC--GAGGAAAGGAGCATGCCTGGTTGGCATGATAAGAATTTTGTTTAGACTTTGCA i manLeu1.NW_012102454v1 I 3954 C 0 s colAng1.NW_012111697v1 2375389 156 + 4274983 GG-----AGGGTCCGCGGGGA-CCGGGAGGGCCGGG-GCTGAGCGTGGAGGACCCGAGCCCAA-GGGGCGAGCGC-AGAGTCAGGGGTGTGTCTTCCTGCGCCGCACGGTGC--GAGGAAAGGAGCATGCCTGGTTGGCATGATAAGAATTTTGTTTAGACTTTTCA i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5433655 156 + 8899380 GG-----AGGGTCCGCGGGGA-CCGGGAGGGCCGGG-GCTGAGCGTGAAGGACCCGCGCCCGA-GGGGCGAGCGC-AGGGTCAGGGGTGTGTCTTCCTGCGGCGCGCGGTGC--GAGGAAAGAAGCATGCCCCGTTGGCATGATAAGAATTTTGTTTAGACTTCTCA i saiBol1.JH378197 I 1 C 0 s cebCap1.NW_016107633v1 1643629 157 - 2680843 GG-----AGGGTCCGCGGGGA-CCGGGAGGGCCGGG-GCTGAGCTTGAAGGACCCGCGCCCGAGGGGGCGAGCGC-AGGGTCAGGGGTGTGTCTTCCTGCGCCGCGCGGTGC--GAGGAAAGAAGCATGCCTGGTTGGCATGATAAGAATTTTGTTTAGACTTCTCA i cebCap1.NW_016107633v1 I 1 C 0 s aotNan1.NW_018505377v1 390767 156 - 4471408 GG-----AGGGTCCGCGGGGA-CCGGGAGGGCCGGG-GCTGAGCGTGAAGGACCCGCGCCCGA-GGGGCGAGCGC-AGGGTCAGGGGTGTGTCTTCCTGCGCCGCGCGGTGC--GAGGAAAGAAGCATGCCTGGTTGGCATGATAAGAATTTTGTTTAGACTTCTCA i aotNan1.NW_018505377v1 I 1 C 0 s micMur3.chr22 3986450 155 - 30143674 GG-----AGGGTCCGCGGGGA-CCGGGGAGGGCCGG-GCCGCGGG-GAAGAACCGGCGCCCAT-GGGGCGAGCGC-AGGGTCAGGTGTGAGTCTCTCTGCTCCGCGCCGCGC--GAGGAAGGGAGCGTGCCTGGTTGGCGTGATAAGAATTTGGTTCATACTTTTTA i micMur3.chr22 C 0 I 519 s proCoq1.NW_012149263v1 601136 157 + 2501019 GG-----AGGGTCCGCGGGGACCCGGGGAGGGCTGG-GCCGGGGGTGAAGAACCCACGCCCGT-GGGGCGAGCGC-AGGGTCAGGTGTGTGTCTTTCTGCTCCGCGCGGCGC--GAGGAACGAAGCATGCCTGGTTGGCATGATAAGAATTTTGTTTATACTTTTTA i proCoq1.NW_012149263v1 I 1 I 1 s otoGar3.GL873654 5514161 157 + 5549422 GG-----AGGGTCCGCGAGGA-CCCGGGAGGGCGGGAGCCCGGGATGAAGAACCCACGCTTGT-GGGGCGAGCGC-AAGATCAGGGGTGTGTCTTTCTGCTCCGCGCGGTGC--GAGGAAAGGAGCCTGCCTGGTTGGCATGATAAGAATTTTGTTCGTACTTTTTA i otoGar3.GL873654 I 1 I 1 s mm10.chr7 111128413 148 - 145441459 GG-----AGGGCC----GAGG-CTG----GGCTAGG-ACTGAG---GAAGGACCCACACCCGT-CGGGCGAGCGCCGGGGTCAGGGGTGTGTCTTCCTGCTCCTCGTGGAGCAGGGGAAAAAGAGCATGCCTGTTTGGCATGATAAGAATTTTGTTTATACTTTAAC i mm10.chr7 I 1 C 0 s canFam3.chr1 4645186 135 - 122678785 GG-----AGCGTCTGTGGTCG-CCCGG-----CGGA-ACCGA-----AGGGACCCGCGCCCGC-------------GGGGTCAAGGGTGTGTCTTCCGGCGCCTCCCGGCGC--GAGGCAAGGAGCGAGCCTGGCTGGCACGATAAGAATTCTGGTTATTCTCCTCA i canFam3.chr1 I 1 I 1 s dasNov3.JH563638 381337 158 + 643850 --GGGTTAGGGTCCGTGGGGG-CTCAGGAGG-CGGG-ACTGAGGATGGAGGACCCACGTCCGT-GGGGCGAGCGC-AAGTGTAGGGGTGTGTTTTCCTGCTCCGCGCCGTGC--GAGTAAAGAAGCATGCCTGGTTGGCATGATAAGAATTTTGTTTATATCCCTTA i dasNov3.JH563638 C 0 I 1 e calJac3.chr22 28588661 10 + 49145316 I a score=3311435.000000 s hg38.chr19_GL383574v1_alt 110253 308 + 155864 GAAATTTTCCAG----AGACTCAGC-----TTTGGGGGC---------CTCCAGTTTGAAAATACCTTGTTC-TGGTCC-------CTC--------ATCCCCATTATAAAAGCAGTTAATTCTCCTTTCCTGGC--AAAACACTCAA-GACGACACAAAAAGTCTTAAGGTagaaaatgacagtcatctgccagtctaccattcagtgacaacca-ctgctaacattttggtgATAATCAATAAATACAGATAGGTAT--TGTTATttttatggactttacagta-------------tgtgatttaacc-------a-------ccgatgagcattga----gatagtttccaatttgtcacaa-gataa-acaattct s panTro5.chr19 36177876 308 + 61309027 GAAATTTTCCAG----AGCCTCAGC-----TTTGGGGGC---------CTCCAGTTTGAAAATACCTTGTTC-TGGTTC-------CTC--------ATCCCCATTATAAAAGCAGTTAATTCACCTTTCCTGGC--AAAACACTCAA-GACGACACAAAAAGTCTTAAGGTagaaaatgacagtcatctgccagtctaccattcagtgacaacca-ctgctaacattttggtgATAATCAATAAATACAGATAGGTAT--TGTTATTTTTATGGACTTTACAGTA-------------TGTGATTTAACC-------A-------CCGATGAGCACTGA----GATAGTTTCCAATTTGTCACAA-GATAA-ACAATTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39922126 308 + 64411610 GAAATTTTCCAG----AGACTCAGC-----TTTGGGGGC---------CTCCAGTTTGAAAATACCTTGTTC-TGGTTC-------CTC--------ATCCCCATTATAAAAGCAGTTAATTCACCTTTCCTGGC--AAAACACTCAA-GACGACACAAAAAGTCTTAAGGTagaaaatgacagtcatctgccagtctaccattcagtgacaacca-ctgctaacattttggtgATAATCAATAAATACAGATAGGTAT--TGTTATTTTTATGGACTTTACAGTA-------------TGTGATTTAACC-------A-------CCGATGAGCACTGA----GATAGTTTCCAATTTGTCACAA-GATAA-ACAATTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6333814 308 - 8369475 GAAATTTTCCAG----AGACTCAGC-----TTTGGGGGC---------CTCCAGTTTGAAAATACCTTGTTC-TGGTCC-------CTC--------ATCCCCATTATAAAAGCAGTTAATTCTCCTTTCCTGGC--AAAACAGTCAA-GACGACACAAAAAGTCTTAAGGTagaaaatgacagtcatctgccagtctaccattcagtgacaacca-ctgctaacattttggtgATAATCAATAAATACAGATAGGTAT--TGTTGTTTTTATGGACTTTACAGTA-------------TGTGATTTAACC-------A-------CCGATGAGCATTGA----GATAGTTTCCAATTTGTCACAA-GATAA-ACAATTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63931519 307 - 106955855 GAAATTTTCCAG----AGACTCAGC-----TTCGGGGGC---------CTCCAGTTTGAAAATAGCTTGTTC-TGGTCC-------CTC--------ATCCCCattataaaagcggttaattctgctctcctggc--aaaacactcaa-gacgacacaaaaagtc-taaggtagaaaatgacagtcatctgccagtctaccattcagtgacaacca-ctgctaacattttggtgATAATCAATACATACAGATAGGTAT--TGTTATttttatggactttacagta-------------tgtgatttaacc-------a-------ctgataagcattga----gataatttccaatttgtcacaa-gataa-acagttct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30246322 306 + 53671032 GAAATTTTCCAGAGAAAGACTCAGC-----TTCGGGGGC---------CTCCAGTTTGAAAATAGCTTGTTC-TGCTCC-------CTC--------ATCCCCattataaaagcagttcattctcctctcctggc--aaaacactcaa-gacgacacaaaaagtc-taagggagaaaatgacaatcatctgccggtctaccattcagtgacaacca-ctgctaacattttggtgATAATCAATAAATACAGATAGGTAT--TTTTA-TTTTATGGACTTTACAGTA-------------TGTGATTTAACC-------A-------CTGATGAACATTGA----GATCGTTTCCAGTTTGTCACAA-GATAA-----TTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34700276 306 + 59248254 GAAATTTTCCAGAGAAAGACTCAGC-----TTCGGGGGC---------CTCCAGTTTGAAAATAGCTTGTTC-TGCTCC-------CTC--------ATCCCCattataaaagcagttcattctcctctcctggc--aaaacactcaa-gacgacacaaaaagtc-taagggagaaaatgacaatcatctgccggtctaccattcagtgacaacca-cagctaacattttggtgATAATCAATAAATACAGATAGGTAT--tttta-ttttatggactttacagta-------------tgtgatttaacc-------a-------ctgatgaacattga----gatcgtttccagtttgtcacaa-gataa-----ttct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4568604 306 - 13342542 GAAATTTTCCAGAGAAAGACTCAGC-----TTTGGGGGC---------CTCCAGTTTGAAAATAGCTTGTTC-TGCTCC-------CTC--------ATCCCCattataaaagcagttcattctcctctcctggc--aaaacactcaa-gacgacacaaaaagtc-taagggagaaaatgactatcatctgccggtctaccattcagtgacaacca-ctgctaacattttggtgATAATCAATAAATACAGATAGGTAT--TTTTA-TTTTATGGACTTTACAGTA-------------TGTGATTTAACC-------A-------CTGATGAACATTGA----GATCGTTTCCAGTTTGTCACAA-GATAA-----TTCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5496957 306 + 7714307 GAAATTTTCCAGAGAAAGACTCAGC-----TTCGGGGGC---------CTCCAGTTTGAAAATAGCTTGTTC-TGGTCC-------CTC--------ATCCCCattataaaagcagttcattctcctctcctggc--aaaacactcaa-gacgacacaaaaagtc-taagggagaaaatgacaatcatctgccggtctaccattcagtgacaacca-ctgctaacattttggtgATAATCAATAAATACAGATAGGTAT--TTTTA-TTTTATGGACTTTACAGTA-------------TGTGATTTAACC-------A-------CTGATGAACATTGA----GATCGTTTCCAGTTTGTCACAA-GATAA-----TTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29300792 306 + 50890351 GAAATTTTCCAGAGAAAGACTCAGC-----TTCGGGGGC---------CTCCAGTTTGAAAATAGCTTGTTC-TGGTCC-------CTC--------ATCCCCattataaaagcagttcattctcctctcctggc--aaaacactcaa-gacgacacaaaaagtc-taagggagaaaatgacaatcatctgccggtctaccattcagtgacaacca-ctgctaacattttggtgATAATCAATAAATACAGATAGGTAT--tttta-ttttatggactttacagta-------------tgtgatttaacc-------a-------ctgatgaacattga----gatcgtttccagtttgtcacaa-gataa-----ttct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 933332 302 - 2385121 GAAATTTTCCAGAGAAAGACTCAGC-----TTCGGGGGC---------CTCCAGTTTGAAAATAGCTTGTTC-TGGTCC-------CTC--------ATCCCCattataaaagcagttcattctcctctcctggc--aaaacactcaa-gacgacacaaaaagtc-taagggagaaaatgacaatcatctgtcggtctaccattcagtgacaacca-ctgctaacattttggtgAT----AATAAATACAGATAGGTAT--TTTTA-TTTTATGGACTTTACAGTA-------------TGTGATTTAACC-------A-------CTGATGAACATTGA----GATCGTTTCCAGTTTGTCACAA-GATAA-----TTCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2375545 307 + 4274983 GAAATTTTCCAGAGAAAGACTCAGC-----TTCGGGGGC---------CTCCAGTTTGAAAATAGCTTGTTC-TGGTCC-------CTG--------ATCCCCattataaaagcagttcattctcctctcctggc--aaaacactcaa-gacgacacacaaagtc-taagggagaagatgacaatcatctgccggtctaccattcagtgacaacca-ctgctaacattttggtgATAATCAATAAATACAGATAGGTAT--TGTTATTTTTATGGACTTTACAGTA-------------TGTGATTTAACC-------A-------CTGATGAGCATTGA----GATCGTTTCCAGTTTGTCACAA-CATAA-----TTCT i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5433811 309 + 8899380 CAAATTTGCCAGAGAAAGACTCAGC-----TTCAGGGGC---------CTGCAGTTTGAAAATAGCTTATTCTTGGCCC-------CGC--------ATCCCCATTATAAAAGCAGTTCATTCTCCTCTCCTGGC--AAAACGCTCAA-GATGACACAAAAAGTC-TAAGGGAGAAAATGACAGTCATCTGCCCGTCTACCATTCGGTGACAACCA-CGGCCAAGATTTGGGTGATTATCAATAATTACAAATAG---T--TATTATTTTTATGGACTTTACAGTG-------------CGAGATGTAACC-------A-------CTGATGAGCACTTA----GATTGTTTCCAGTTTGTCACAA-GATAA-ACACTTCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1643786 311 - 2680843 CAAATTTGCCAGAGAAAGACTCAGC-----TTGAGGGGT---------CTGCAGTTTTAAAATAGCTTATTC-TGGCCC-------CGC--------ATCCCCattataaaagcagttcattctcctctcctggc--aaaacgctcaa-gatgacacaaaaaatc-taagggagaaaatgacaatcatctgctcgtctaccattcggtgacaacca-ctgccaagattttggtgATTATCAATAATTACAAATAGATAT--TGTTATTTTTATGGAGTTTACAGTG-------------CGAGATGTAACC-------A-------CTGATGAGCACTTA----GATCGTTTCCAGTTTGTCACAA-GATAA-ACAATTCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 390923 311 - 4471408 CAAATTTGCCAGAGAAAGACTCAGC-----TTGAGGGGC---------CTGCAGTTTGAAAATAGCTTGTTC-TGGCCC-------CGC--------ATCCCCATTATAAAAGCAGTTCATTCTCCTCTCCTGGC--AAAACGCTCAA-GACGACACAAAAAGTC-TAAGGGAGAAAATGACAATCATCTGCCCGTCTACCATTTGGTGACAACCA-CTGCCAAGATTTTGGTGATTATCAATAAATACAAATAGAGAT--TGTTATTTTTATGGACTTTACAGTG-------------CGAGATGTAACC-------A-------CTGATGAGCACTTA----GATCGTTTCCAGTTTGTCACAA-GATAA-ACAATTCT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 601294 304 + 2501019 AAAATTTGCCAGATAAAGACTCCGT-----CTGGGAGGC---------CCCCCAGTTGAAAA-----------TAGCCC-------CTC--------ATCCCCATTATAGAAACAATTCTTTCTCCTctccttgt--aaaacactcaa-gacaacacaaaaagta-taagcaggaaaatgacagtcgtctgccagtttaccactcagtgacaacca-ctgcgaacattttggtgat----aataaatacagatatGTAT--TGTCACTTTTACAGAGTTTATAGTA-------------TATAatttaacgaagctcta-------ctgatgaacattta----gattggttccagtttgtcacaa-gataa-acaattct i proCoq1.NW_012149263v1 I 1 I 151 s otoGar3.GL873654 5514319 293 + 5549422 AAAATTTGCCGGCTAAAGGCTCAGTTTGGCCTGGGGGGA---------ACCCAGTTGGAAAA-----------TAGCCC-------CTC--------ATCCTCGTTATAAAAGCTGTTCTTTCTTCTCC-----T--AAAACACTCAA-GACAGCGCAAAAAGTA-TATGGAAGAAAATGA-----------CAGTTTACCACTAAGTGACAGCCA-CTGCTAATATTTTGGTGAT----AATAAAtacagatatgtat--tgttacttttatggacttcatagta-------------tatgatttgaccaagctcta-------ctgatgaacattta----gattgtttccagtttgtcacaa-gataa-acaatTTT i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111128561 322 - 145441459 CAAAATTGCCTGGGAAACGATCAGC-----CTGGGGAGC---------CCCCAGTTTGAAAATAGATTGTCC-TTGCCCTTCCCCACCC--------GTTGCCATTATGAAAGCGATTCATTCTTCTGTCCTTGTAAAAAACACTCGC-CACTGTATACAAAGTGTCAGGAGGGAAAATGACCA------------CGGCGACTCGGTGACAACCG-CTCCTAACATTTTGGTGAC-ATCAGTAAGTGCAGATATATATACTGTCACTCTTAGAGGTTTTGTAGTAGAACATCGAGTACCATAATTTATCC-------AAAC---TCTAATGAATATTT-----GATTGTCCC-----TGTCACAA-GAAAAAACACTTGT i mm10.chr7 C 0 I 1 s canFam3.chr1 4645322 317 - 122678785 AAAATCCGCCCGGTGAGCGCCCGGG-----TCGGGGGGA---------CCCCGGTTTGGAAGCGGCATGTGG-CTGCCC-------CTCCCCCCGCACCCCCCACGACACGAGCGACAGTCTCCTCACACTCGGC--CGCGCACGGAGTGTCGTGACAGGACTTT-CGCGG------ACGGCGCGCCTCCGGCGGCCTCGCCTGC-GCGACAGTCGTTTGCGGACGCTGCGCTAACAGC----------------GTGT--GATCACTCTAATGGGCTTCGTAGGC-ACCGCGGCGTACCGTGGTGTAACC-------AGACCCTCCGGATGGGCCTGTGGGTCGACCGTTTCCAGTTCGTCACAA-GATAC-----CTCT i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 381496 309 + 643850 AAAATTTGCCAGATA-AAACTCAGC-----CTTTGGGGTGGGTGGGTGGCCTAATTTGAAAATAGTTTGCTT-TTTTCT-------CCT-----------CTGATTATAAAAGTAATTCATTCTGCTTG--------AAAACATC--A-GGCAACACAAATAATT-TAAGGGGGAA-ATAAGAATCACTCTC------------------CAACTA-CTGCTAATGTTTTCATGat-atcagtaaatgtagaaatgtat---atcacttttactgatttcataatataccatcatataccataatttaacgaagcccaa-------ttgatgaacatttaa---ggttgtttccagtttattacaattataa-acaaatct i dasNov3.JH563638 I 1 C 0 e micMur3.chr22 3986605 519 - 30143674 I e calJac3.chr22 28588661 10 + 49145316 I a score=207801.000000 s hg38.chr19_GL383574v1_alt 110561 20 + 155864 gccggaaggatttgtttga-t- s panTro5.chr19 36178184 20 + 61309027 GCCGGAAGGATTTGTTTGA-T- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39922434 20 + 64411610 GCCGGAAGGATTTGTTTGA-T- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334122 20 - 8369475 GCCGGAAGGATTTGTTTGA-T- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63931826 20 - 106955855 gccggaaggatttgtttga-t- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30246628 20 + 53671032 GCCGGAAGGATTCATCTGA-T- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34700582 20 + 59248254 gccggaaggattcatctga-t- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4568910 20 - 13342542 GCCGGAAGGATTCATCTGA-T- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5497263 20 + 7714307 GCCGGAAGGATTCATCTGA-T- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29301098 20 + 50890351 gccggaaggattcatctga-t- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 933634 20 - 2385121 GCCGGAAGGATTCATCTGA-T- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2375852 20 + 4274983 GCCGGAAGGATTCATCTGA-T- i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5434120 19 + 8899380 GCCAGAAGGATTTGCCTGA--- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644097 19 - 2680843 gccacaaggacttgtctga--- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 391234 19 - 4471408 GCCAGAAGGATTTGTCTGA--- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5514612 20 + 5549422 ACCAAGAGGACTTGTCTAA-T- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111128884 21 - 145441459 GCAAAAAGGATTTATTTGATT- i mm10.chr7 I 1 C 0 s canFam3.chr1 4645639 20 - 122678785 GCCCAAAGGATTTGTCTGA-T- i canFam3.chr1 C 0 I 413 s dasNov3.JH563638 381805 21 + 643850 gtcaaaatgatttgtctga-tt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e calJac3.chr22 28588661 10 + 49145316 I a score=54802.000000 s hg38.chr19_GL383574v1_alt 110581 8 + 155864 atggtctt s panTro5.chr19 36178204 8 + 61309027 ATGGTCTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39922454 8 + 64411610 ATGGTCTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334142 8 - 8369475 ATGGTCTt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63931846 8 - 106955855 atggtctt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30246648 8 + 53671032 ACGGTCTt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34700602 8 + 59248254 acggtctt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4568930 8 - 13342542 ATGGTCTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5497283 8 + 7714307 ACGGTCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29301118 8 + 50890351 actgtctt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 933654 8 - 2385121 ACGGTCtt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2375872 8 + 4274983 ATGGTCTT i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5434139 2 + 8899380 ------TT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644116 2 - 2680843 ------tt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 391253 2 - 4471408 ------TT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5514632 8 + 5549422 TTATTTTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111128905 8 - 145441459 ATTGTCTT i mm10.chr7 C 0 I 286 s dasNov3.JH563638 381826 8 + 643850 attgtctt i dasNov3.JH563638 C 0 I 111 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e canFam3.chr1 4645659 413 - 122678785 I e calJac3.chr22 28588661 10 + 49145316 I a score=11406.000000 s hg38.chr19_GL383574v1_alt 110589 2 + 155864 tt s panTro5.chr19 36178212 2 + 61309027 tt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39922462 2 + 64411610 tt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334150 2 - 8369475 tt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63931854 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30246656 2 + 53671032 tt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34700610 2 + 59248254 tt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4568938 2 - 13342542 TT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5497291 2 + 7714307 TT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29301126 2 + 50890351 tt i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2375880 2 + 4274983 Tt i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5434141 2 + 8899380 AT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644118 2 - 2680843 at i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 391255 2 - 4471408 AT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5514640 2 + 5549422 TT i otoGar3.GL873654 C 0 I 72 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e dasNov3.JH563638 381834 111 + 643850 I e mm10.chr7 111128913 286 - 145441459 I e canFam3.chr1 4645659 413 - 122678785 I e calJac3.chr22 28588661 10 + 49145316 I e manLeu1.NW_012102454v1 933662 0 - 2385121 C a score=-9401.000000 s hg38.chr19_GL383574v1_alt 110591 1 + 155864 t-------- s panTro5.chr19 36178214 1 + 61309027 t-------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39922464 1 + 64411610 t-------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334152 1 - 8369475 t-------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63931856 1 - 106955855 t-------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30246658 1 + 53671032 t-------- i rheMac8.chr19 C 0 I 1 s macFas5.chr19 34700612 1 + 59248254 t-------- i macFas5.chr19 C 0 I 1 s macNem1.NW_012011689v1 4568940 1 - 13342542 t-------- i macNem1.NW_012011689v1 C 0 I 1 s cerAty1.NW_012005268v1 5497293 1 + 7714307 T-------- i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29301128 1 + 50890351 t-------- i chlSab2.chr6 C 0 I 1114 s colAng1.NW_012111697v1 2375882 1 + 4274983 t-------- i colAng1.NW_012111697v1 C 0 I 3 s saiBol1.JH378197 5434143 2 + 8899380 TA------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644120 2 - 2680843 tg------- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 391257 9 - 4471408 TGTCTTGtt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e dasNov3.JH563638 381834 111 + 643850 I e otoGar3.GL873654 5514642 72 + 5549422 I e mm10.chr7 111128913 286 - 145441459 I e canFam3.chr1 4645659 413 - 122678785 I e calJac3.chr22 28588661 10 + 49145316 I e manLeu1.NW_012102454v1 933662 0 - 2385121 C a score=92471.000000 s hg38.chr19_GL383574v1_alt 110592 21 + 155864 ttt----tttttt--ttaataagagac s panTro5.chr19 36178215 23 + 61309027 ttt----ttctctctttaataagagac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39922465 23 + 64411610 ttt----ctctctctttaataagagac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334153 22 - 8369475 ttt----tt-tttctttaataagagac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63931857 22 - 106955855 ttt----tt-tttctttaataaaagac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30246660 21 + 53671032 --t----ttgtttgtttaataagagac i rheMac8.chr19 I 1 C 0 s macFas5.chr19 34700614 21 + 59248254 --t----ttgtttgtttaataagagac i macFas5.chr19 I 1 C 0 s macNem1.NW_012011689v1 4568942 22 - 13342542 --tg---ttgtttgtttaataagagac i macNem1.NW_012011689v1 I 1 C 0 s cerAty1.NW_012005268v1 5497295 21 + 7714307 --t----ttgtttgtttaataagagac i cerAty1.NW_012005268v1 I 1 C 0 s manLeu1.NW_012102454v1 933662 21 - 2385121 --t----ttgtttgtttaataagagac i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2375886 21 + 4274983 --t----ttttttctttaataagagac i colAng1.NW_012111697v1 I 3 C 0 s saiBol1.JH378197 5434145 20 + 8899380 -------TCTTTTTTTCAATAGTAGAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644122 20 - 2680843 -------tctttttttcaataggagac i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 391266 24 - 4471408 ---tttttctttttttcaataggagac i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e dasNov3.JH563638 381834 111 + 643850 I e otoGar3.GL873654 5514642 72 + 5549422 I e mm10.chr7 111128913 286 - 145441459 I e chlSab2.chr6 29301129 1114 + 50890351 I e canFam3.chr1 4645659 413 - 122678785 I e calJac3.chr22 28588661 10 + 49145316 I a score=1619913.000000 s hg38.chr19_GL383574v1_alt 110613 203 + 155864 tgttgcccaggctggtctcaaaacttctggcctcaagcgaccctcacgccttcgccttccaaagtgttgggattacaagtgtgagatattacacctggtctgattgttatcttagaataaatttacaaatggggtcaaaggtaactttatttgtttttttttgagacagtctccctctgtcacccaggctggagtgcagtggc s panTro5.chr19 36178238 198 + 61309027 tgttgcccaggctggtctcaaaacttttggcctcaagcgaccctcgcgccttcgccttccaaagtgttgggattacaagtgtgagatattacacctggtcTGATTATTATCTTAGAATAAACTTACAGATGGGGTCAAAGGTAACtttgttt-----tttttgagacagtctcgctctgtcagccaggctggagtgcagtggc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39922488 198 + 64411610 tgttgcccaggctggtctcaaaacttctggcctcaagcgaccctcgcgccttcgccttccaaagtgttgggattacaagtgtgagatattacacctggtcTGATTATTATCTTAGAATAAATTTACAGATGGGGTCAAAGGTAACtttgttt-----tttttgagacagtctcgctctgtcacccaggctggagtgcagtggc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334175 200 - 8369475 tgttgcccaggctggtctcaaaacttctggcctcaagcgaccctcgcgccttcgccttccaaagtgttgggattacaagtgtgagatattacacctggtcTGATTATTATCTTAGAATAAATTTACAAATGGGGTCAAAGGTAACtttgttt---tttttttgagacagtctcgctctgtcacccagtctggagtgcagtgat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63931879 198 - 106955855 tgttgcccaggctggtctcaaaacttctggcctcaagcgaccctcgcgccttcccctcccaaagtgttgggattacaactgtgagatactacacctggtctgattattatcttagaataaatttacaaatggggtcaaaggTAACTTGGttt-----tttttgagacagtcttgctctgtcaccgaggctggagtgcagtggc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30246681 199 + 53671032 tgttgcccaggctggtctc-aaacttctggcctcaagcgaccctcccgccttggcctcccaaagtgtcggggttacaagtgtgagatactacacctggtcTGATTATTATCTTAGAATAAATTTACAAATGGGGTCAAAGGTAACttttttt---gttctttgagacagtctcgctctgtcacccaggctggagtgcagtggc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34700635 199 + 59248254 tgttgcccaggctggtctc-aaacttctggcctcaagcgaccctcccgccttggcctcccaaagtgtcggggttacaagtgtgagatactacacctggtctgattattatcttagaataaatttacaaatggggtcaaaggtaacttttttt---gttctttgagacagtctcgctctgtcacccaggctggagtgcagtggc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4568964 198 - 13342542 tgttgcccaggctggtctc-aaacttctggcctcaagcgaccctcccgccttggcctcccaaagtgtcggggttacaagtgtgagatactacacctggtcTGATTATTATCTTAGAATAAATTTACAAATGGGGTCAAAGGTAACttttttt---gtt-tttgagacagtcttgctctgtcacccaggctggagtgcagtggc i macNem1.NW_012011689v1 C 0 I 4950 s cerAty1.NW_012005268v1 5497316 199 + 7714307 tgttgcccaggctggtctc-aaacttctggcctcaagcgaccctcccgccttggcctcccaaagtgtcggggttacaagtgtgagatactacacctggtcTGATTATTATCTTAGAATAAATTTACAAATGGGGTCAAAGGTAACttttttt---gttctttgagacagtctcgctctgtcacccaggctggagtgcagtggc i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 933683 199 - 2385121 tgttgcccaggctggtctc-aaacttctggcctcaagcgaccctcccgtcttggcctcccaaagtgtcggggttacaagtgtgagatactacatctggtcTGATTATTATCTTAGAATAAATTTACAAATGGGGTCAAAGGTAACttttttt---gttctttgagacagtctcgctctgtcacccagcctggagtgcagtggc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2375907 194 + 4274983 tgttgcccaggctggtctc-aaacttctggcgtcaagcgaccctcccgcctcggcctcccaaagtgtcgggattacaagtgtgagatactacacctggtcTGATTA-----TTAGAATAAATTTACAAATGGGGTCAAATGTAACGtttttt---gttctttgagacagtcttgctctgtcacccaggctggagtgcagtgac i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28588671 193 + 49145316 tgttgcccaggctggtctc-aaacttctggcctcaagcgaccctctcaccttggactcccaaagtgttggg-ttacaagtgtgagatactacacctggtcTGATT-TTGTCTTAGAATAAATTTACAAAGGGGGTCAAAAGTAACTTGtttt-------ttggagattgtctcactttgtcacccaggctggagggcagtggc i calJac3.chr22 I 10 C 0 s saiBol1.JH378197 5434165 193 + 8899380 tgttgcccaggctggtctc-aaacttctggcctcaagcaaccctctcaccttggcctcccaaagtgttggg-ttacaagtgtgagatactacacccggtcTGATT-TTGTCTTAGAATAAATTTACAAATGGGGTCAAAAGTAACTTGtttt-------ttggagactgtctcactttgtcacccaggccggagggcagtgac i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644142 193 - 2680843 tgttgcccaggctggtctc-aaacttctggcctcaagcgacgctctcaccttggcctcccaaagtgttggg-ttacaagtgtgagctactacacccggtcTAATT-TTGTCTTAGAATAAATTTACAAATGGGGTCAAAAGTAACttgtttt-------ttgtagactgtctcactttgtcacccaggctggagggcagtggt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 391290 191 - 4471408 --ttgcccaggctggtctc-aaacttctggcctcgagcgaccctctcaccttggcctcctaaagtgttggg-ttacaagtgtgagatactacacccggtcTGATT-TTGTCTTAGAATAAATTTATAAATGAGGTCAAAAGTAACttgtttt-------ttggagactgtctcactttgtcacccaggctggagggcagtggc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e dasNov3.JH563638 381834 111 + 643850 I e otoGar3.GL873654 5514642 72 + 5549422 I e mm10.chr7 111128913 286 - 145441459 I e chlSab2.chr6 29301129 1114 + 50890351 I e canFam3.chr1 4645659 413 - 122678785 I a score=862775.000000 s hg38.chr19_GL383574v1_alt 110816 122 + 155864 gggatctagattaactgcaaccttagcctcccgggttcgagcgattctcctgctttagtctcccgagtagctgagattacaggcac---ccaccacgcccggctaatttttgtatttttagtaga s panTro5.chr19 36178436 122 + 61309027 gggatctagattaactgcaaccttagcctcccgggttcgagcgattctcctgctttagtctcccgagtagctgagattacaggcac---ccaccatgcccggctaatttttgtatttttggtgga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39922686 122 + 64411610 gggatctagattaactgcaaccttagcctcccgggttcgagcgattctcctgctttagtctcccgagtagctgagattacaggcac---ccaccatgcccggctaatttttgtatttttagtaga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334375 122 - 8369475 gggatctagattaactgcaaccttagcctcccgggttcgagcgattctcctgctttagtctcccgagtagctgagattacaggcac---ccaccacgcccggctaatttttgtatttttagtaga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63932077 125 - 106955855 gggatctagatttactgcaaccttcacctcccgggttcgagcgattctcctgctttagtctcccgagtagctgagattacaggcgcccaccaccacgcccggctaatttttgtatttttagtaga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30246880 125 + 53671032 ggcatctagattcactgcatcctccgcctctcgagttcgagcgattatcctgctttactctcccgagtagctgagattacaggcgcccaccaccacgccctgctaatttttgtatttttagtaga i rheMac8.chr19 C 0 I 748 s macFas5.chr19 34700834 125 + 59248254 ggcatctagattcactgcatcctccgcctctcgagttcgagcgattatcctgctttactctcccgagtagctgagattacaggcgcccaccaccacgccctgctaatttttgtatttttagtaga i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5497515 125 + 7714307 ggcatgtagattcactgcatcctccgcctctcgagttcgagcgattatcctgctttactctcccgagtagctgagattacaggcgcccacaaccacgccctgctaatttttgtatttttagtaga i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 933882 125 - 2385121 ggcatgtagattcactgcatcctccgcctctcgagttcgagcgattatcctgctttactctcccgagtagctgagattacaggcgcccacaaccacgccctgctaatttttgtatttttagtaga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2376101 125 + 4274983 gggatctagattcactgcatcctccgcctctcgagttcgagcgattatcctgctttactctcccgagtggctgagattacaggcgcccaccaccacgccctgctaatttttgtatttttattaga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28588864 125 + 49145316 acgatgtagattcgctgcaacctctgcctcctgagttcgagcgattctcctgctttagtttccctagtagctgggattacagacgcttgccaccacacccggctaatttgtgtatttttagtaga i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5434358 125 + 8899380 acgatctagattcgctgcaacctctgcttcccgagttcgagcgattctcctgctttagtttcccgagtagctgggattacagatgcttaccaccacacccggctaatttgtgtatttttagtaga i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644335 125 - 2680843 gcgatctagattcgctgcaacctctgcctcccgagttcgagcgattctcctgctttagtttctggagtagctgggattacagacgcttaccaccacacccggctaatttgtgtatttttagtaga i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 391481 125 - 4471408 gcgatctagattccctgcaacctctgcctcccaagtttgagagattctcctgctttagtttcccgagtagctgggattacagatgcttaccaccacacccggctaatttgtgtatttttagtaga i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e dasNov3.JH563638 381834 111 + 643850 I e otoGar3.GL873654 5514642 72 + 5549422 I e mm10.chr7 111128913 286 - 145441459 I e chlSab2.chr6 29301129 1114 + 50890351 I e canFam3.chr1 4645659 413 - 122678785 I e macNem1.NW_012011689v1 4569162 4950 - 13342542 I a score=763048.000000 s hg38.chr19_GL383574v1_alt 110938 130 + 155864 gacagggtttcgcccagttgaccaggttggtctcgaactcctgacctcaggtgatccgcctggctcggcgttccaaagtgctgggattataggcgtgagccaccgtgtccggccgtaac-----gttcaattttt s panTro5.chr19 36178558 130 + 61309027 gacagggtttcgcccatttgaccaggttggtctcgaactcctgacctcaggtgatccgcctggctcggcgttccaaagtgctgggattataggcgtgggccaccgtgtccggccGTAAC-----GTTCAATTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39922808 130 + 64411610 gacagggtttcgcccatttgaccaggttggtctcgaactcctgacctcaggtgatccgcctggctcggcgttccaaagtgctgggattataggcgtgggccaccgtgtccggccGTAAC-----GTTCAATTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334497 130 - 8369475 gacagggtttcgcccagttgaccaggttggtctcgaactcctgacctcaggtgattcgcctggctcggcgttccaaagtgctgggattataggcgtgagccaccgtgtccggccGTAAC-----GTTCAATTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63932202 130 - 106955855 gacagggtttcgcccagttgaccaggttggtctcgaactcctgacctcaggtgatccgcccggctcggccttccaaagtgctggggttataggcgtgaaccaccttgtccggccGCAAC-----GTTCAATTTTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34700959 130 + 59248254 gacagggtttcacccagttgaccaggttggtcttgaactcctgacctcaagtgatccgcccggctcggccttccaaagtgctgggattataggcgtgagccaccttgtctggccgtaac-----gttcaattttt i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5497640 130 + 7714307 gacagggtttcacccagttgaccaggttggtctcgaactcctgacctcaagtgatccgcccggctcggccttccaaagtgctgggattataggcgtgagccaccttgtctggccGTAAC-----GTTCAATTTTT i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 934007 130 - 2385121 gacagggtttcacccagttgaccaggttggtctcgaactcctgacctcaggtgatccgcccggctcggccttccaaagtgctgggattataggcgtgagccaccttgtctggccGTAAC-----GTTCAATTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2376226 125 + 4274983 gacagggtttccctc----gatcaggttggtctcgaactcgtgacctcaagtgat-cgcccggctcggccttccaaagtgctgggattataggcgtgagccaccttgtctggccGTAAC-----ATTCAATTTTT i colAng1.NW_012111697v1 C 0 I 309 s calJac3.chr22 28588989 135 + 49145316 gacagggttttgccctgctgaccaggatggtcttgaactcctgaccacaggtgatgcgcccacgtaggcctcccaaagtgttgggattacaggcgtgagccacctcttccggccGTAACGTTATGTTCATTTTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5434483 135 + 8899380 gacagggttttgccctgctgaccaggatggtcttgaactcctgaccacagatgatgcgcccacgtaggcctcccaaagtgttgggattataggcatgagccatctcttccggccCTAACGTTACGTTCATTTTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644460 135 - 2680843 gacagggttttgccctgctgaccaggatggtcttgaactcctgatcacagatgatgcgcccacataggcctcccaaagtgttgggattataggcatgagccacctcttccggcTGTAACATTATGTTCATTTTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 391606 135 - 4471408 gacagggttttgccctgctgaccaggatggtcttgaactcctgaccacaggtgatgcgcccacgtaggcctcccaaagtgatgggattacaggcgtaagccacctctttcggccGTAACATTATGTTCATTTTTT i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e dasNov3.JH563638 381834 111 + 643850 I e otoGar3.GL873654 5514642 72 + 5549422 I e mm10.chr7 111128913 286 - 145441459 I e chlSab2.chr6 29301129 1114 + 50890351 I e canFam3.chr1 4645659 413 - 122678785 I e macNem1.NW_012011689v1 4569162 4950 - 13342542 I e rheMac8.chr19 30247005 748 + 53671032 I a score=58243.000000 s hg38.chr19_GL383574v1_alt 111068 10 + 155864 aagaatacat s panTro5.chr19 36178688 10 + 61309027 AAGAATATAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39922938 10 + 64411610 AAGAATATAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334627 10 - 8369475 AAGAATACAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63932332 10 - 106955855 AAGAGTACAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34701089 10 + 59248254 aagaatacat i macFas5.chr19 C 0 I 562 s cerAty1.NW_012005268v1 5497770 10 + 7714307 AAGAATACAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29302243 10 + 50890351 aaggatacat i chlSab2.chr6 I 1114 C 0 s manLeu1.NW_012102454v1 934137 10 - 2385121 AAGAATACAT i manLeu1.NW_012102454v1 C 0 T 2295 s colAng1.NW_012111697v1 2376660 10 + 4274983 aagaaTACAT i colAng1.NW_012111697v1 I 309 C 0 s calJac3.chr22 28589124 8 + 49145316 --AAGTACAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5434618 8 + 8899380 --AAGTACAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644595 8 - 2680843 --AAGTACAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 391741 8 - 4471408 --AAGTACAT i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e dasNov3.JH563638 381834 111 + 643850 I e otoGar3.GL873654 5514642 72 + 5549422 I e mm10.chr7 111128913 286 - 145441459 I e canFam3.chr1 4645659 413 - 122678785 I e macNem1.NW_012011689v1 4569162 4950 - 13342542 I e rheMac8.chr19 30247005 748 + 53671032 I a score=-7524.000000 s hg38.chr19_GL383574v1_alt 111078 2 + 155864 aG- s panTro5.chr19 36178698 2 + 61309027 AG- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39922948 2 + 64411610 AG- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334637 2 - 8369475 AG- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63932342 2 - 106955855 AT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30247753 2 + 53671032 AG- i rheMac8.chr19 I 748 C 0 s macFas5.chr19 34701661 2 + 59248254 aG- i macFas5.chr19 I 562 C 0 s cerAty1.NW_012005268v1 5497780 2 + 7714307 Ag- i cerAty1.NW_012005268v1 C 0 I 306 s chlSab2.chr6 29302253 2 + 50890351 ag- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 931852 2 - 2385121 aG- i manLeu1.NW_012102454v1 T 2295 C 0 s colAng1.NW_012111697v1 2376670 2 + 4274983 AG- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28589132 2 + 49145316 -GG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5434626 2 + 8899380 -GA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644603 2 - 2680843 -GG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 391749 2 - 4471408 -GG i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e dasNov3.JH563638 381834 111 + 643850 I e otoGar3.GL873654 5514642 72 + 5549422 I e mm10.chr7 111128913 286 - 145441459 I e canFam3.chr1 4645659 413 - 122678785 I e macNem1.NW_012011689v1 4569162 4950 - 13342542 I a score=4999.000000 s hg38.chr19_GL383574v1_alt 111080 2 + 155864 TA s panTro5.chr19 36178700 2 + 61309027 TA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39922950 2 + 64411610 TA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334639 2 - 8369475 TA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63932344 1 - 106955855 T- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30247755 2 + 53671032 TG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34701663 2 + 59248254 TG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 29302255 2 + 50890351 tg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 931854 2 - 2385121 TG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2376672 2 + 4274983 TG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28589134 2 + 49145316 TA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5434628 2 + 8899380 TA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644605 2 - 2680843 TA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 391751 2 - 4471408 TA i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e dasNov3.JH563638 381834 111 + 643850 I e otoGar3.GL873654 5514642 72 + 5549422 I e mm10.chr7 111128913 286 - 145441459 I e canFam3.chr1 4645659 413 - 122678785 I e cerAty1.NW_012005268v1 5497782 306 + 7714307 I e macNem1.NW_012011689v1 4569162 4950 - 13342542 I a score=365354.000000 s hg38.chr19_GL383574v1_alt 111082 56 + 155864 TTTGTTTTCCTTTGACATATTTGG-ACAATTTTTC--TGTCTCTTTGTCAT-AAAAAAAA s panTro5.chr19 36178702 56 + 61309027 TTTTTTTTCCTTTGACATATTTGG-ACAATTTTTC--TGTCTCTTTGTCAT-AAAAAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39922952 55 + 64411610 TTTTTTTTCCTTTGACATATTTGG-ACAATTTTTC--TGTCTCTTTGTCAT--AAAAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334641 56 - 8369475 TTTTTTTTCCTTTGACATATTTGG-ACAATTTTTC--TGTCTCTTTGTCAT-AAAAAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63932345 56 - 106955855 TTTTTTCTCCTTTGACCTATTTGG-ACAATTTTTC--TGTGTCATTGTCAT-AAAAAAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30247757 57 + 53671032 TTTATTTTCCTTTGACATATTTGA-AAATTTTTTC--TGTCTCATTGTCATAAAAAAAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34701665 57 + 59248254 TTTATTTTCCTTTGACATATTTGA-AAAATTTTTC--TGTCTCATTGTCATAAAAAAAAA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5498088 57 + 7714307 TTTATTTTCCTTTGACATATTTGA-AAAATTTTTC--TGTCTCATTGTCATAAAAAAAAA i cerAty1.NW_012005268v1 I 306 C 0 s chlSab2.chr6 29302257 56 + 50890351 tttattttccttTGACATATTTGA-AAAGTTTTTC--TGTCTCATTGTCAT-AAAAAAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 931856 57 - 2385121 TTTATTTTCCTTTGACATATTTGA-AAAATTTTTC--TGTCTCATTGTCATAAAAAAAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2376674 56 + 4274983 TTTATTTTCCTTTGACATATTTGA-AAAATTTTTC--TGTCTCATTGTCAT-AAAAAAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28589136 57 + 49145316 -TTTCTTTTCTTTGACATATTTGG-AAAATTTTTCTTTGTCTGAATGTTATAAAAAAAA- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5434630 57 + 8899380 -TTTCTTTTCTTTGACATATTTGGAAAAATTTTTCTTTGTCTGAATGTTAC-AAAAAAA- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644607 56 - 2680843 -TTTCTTTTCTTTGACATATTTGG-AAAATTTTTCTTTGTTTGAATGTTAT-AAAAAAA- i cebCap1.NW_016107633v1 C 0 I 13 s aotNan1.NW_018505377v1 391753 53 - 4471408 -TTTCTTTTCTTTGTCATATTTGG-AAAATTTTTCTTTGTCTGAATGTTAT-AAAA---- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e dasNov3.JH563638 381834 111 + 643850 I e otoGar3.GL873654 5514642 72 + 5549422 I e mm10.chr7 111128913 286 - 145441459 I e canFam3.chr1 4645659 413 - 122678785 I e macNem1.NW_012011689v1 4569162 4950 - 13342542 I a score=79299.000000 s hg38.chr19_GL383574v1_alt 111138 12 + 155864 ATTCCAgcctgg s panTro5.chr19 36178758 12 + 61309027 ATTCCAgcctgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39923007 12 + 64411610 ATTCCAgcctgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334697 12 - 8369475 ATTCCAgcctgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63932401 12 - 106955855 ATTCCAGCCTGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30247814 12 + 53671032 ATTCTggcctgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34701722 12 + 59248254 ATTCTggcctgg i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5498145 12 + 7714307 ATTCTggcctgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29302313 12 + 50890351 ATTCTggcctgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 931913 12 - 2385121 ATTCTggcctgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2376730 12 + 4274983 ATTCCAgcctgg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28589193 12 + 49145316 GTTCTggccggc i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5434687 12 + 8899380 GTTCTggccggg i saiBol1.JH378197 C 0 I 1 s aotNan1.NW_018505377v1 391806 12 - 4471408 GTTCTggccggg i aotNan1.NW_018505377v1 C 0 I 1 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e dasNov3.JH563638 381834 111 + 643850 I e otoGar3.GL873654 5514642 72 + 5549422 I e mm10.chr7 111128913 286 - 145441459 I e canFam3.chr1 4645659 413 - 122678785 I e cebCap1.NW_016107633v1 1644663 13 - 2680843 I e macNem1.NW_012011689v1 4569162 4950 - 13342542 I a score=14324.000000 s hg38.chr19_GL383574v1_alt 111150 2 + 155864 cg s panTro5.chr19 36178770 2 + 61309027 ca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39923019 2 + 64411610 cg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334709 2 - 8369475 cg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63932413 2 - 106955855 CG i nomLeu3.chr10 C 0 I 659 s rheMac8.chr19 30247826 2 + 53671032 cg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34701734 2 + 59248254 cg i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5498157 2 + 7714307 cg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29302325 2 + 50890351 cc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 931925 2 - 2385121 cg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2376742 2 + 4274983 cg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28589206 2 + 49145316 tg i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5434700 2 + 8899380 cg i saiBol1.JH378197 I 1 C 0 s cebCap1.NW_016107633v1 1644676 2 - 2680843 cg i cebCap1.NW_016107633v1 I 13 C 0 s aotNan1.NW_018505377v1 391819 2 - 4471408 cg i aotNan1.NW_018505377v1 I 1 C 0 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e dasNov3.JH563638 381834 111 + 643850 I e otoGar3.GL873654 5514642 72 + 5549422 I e mm10.chr7 111128913 286 - 145441459 I e canFam3.chr1 4645659 413 - 122678785 I e macNem1.NW_012011689v1 4569162 4950 - 13342542 I a score=1052906.000000 s hg38.chr19_GL383574v1_alt 111152 144 + 155864 cgatggctcatgcctgtaatcccagcactttgggaggc-cgaggcgggcggatcacttgaggtcaggagttctagaccagcctggccaacgtggtgaaacccggattcaact-aaaaaaatac--aaaaaaa-cacattagccaagcat s panTro5.chr19 36178772 145 + 61309027 cgatggctcatacctgtaatcccagcactttgggaggc-cgaggcgggcggatcacttgaggtcaggagttgtagaccagcctggccaacgtggtgaaacccggattcaact-aaaaaaatac--aaaaaaaacacattagccaagcat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39923021 144 + 64411610 cgatggctcatacctgtaatcccagcactttgggaggc-cgaggcgggcggatcacttgaggtcaggagttctagaccagcctggccaacgtggtgaaacccggattcaact-aaaaaaatac--aaaaaaa-cacattagccaagcat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334711 143 - 8369475 cgatggctcatgcctgtaatcccagcactttgggaggc-cgaggcgggcggatcacttgaggtcaggagttctagaccagcctggccaacgtggtgaaacccggattcaact-aaaaaaatac--aaaaaaa--acattagccaagcat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63933074 145 - 106955855 cgatggctcatgcctgtaatcccagcactttgggaggctttaggcgggcgga-cacttgaggtcaggagttctagaccagcctggccaacgtggtgaaacccggactcaactaaaaaaaatac--aaaagaa-cacattagctaagcat i nomLeu3.chr10 I 659 C 0 s rheMac8.chr19 30247828 127 + 53671032 cgatggttcatgcctgtaatcccagcactttgggaggc-tgaggcgggcagatcac--------------tctagaccagcctggccaacgtagtgaaacccggattcaact-aaaaaaatac--aaaaaaa----attagccaagcat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34701736 127 + 59248254 cgatggttcatgcctgtaatcccagcactttgggaggc-tgaggcgggcagatcac--------------tctagaccagcctggccaacgtagtgaaacccggattcaact-aaaaaaatac--aaaaaaa----attagccaagcat i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5498159 127 + 7714307 cgatggttcatgcctgtaatcccagcactttgggaggc-tgaggcgggcagatcac--------------tctagaccagcctggccaacgtagtgaaacccggattcaact-aaaaaaatac--aaaaaaa----attagccaagcat i cerAty1.NW_012005268v1 C 0 I 156 s chlSab2.chr6 29302327 128 + 50890351 tgatggctcatgcctgtaatcccagcactttgggaggc-tgaggccggcagatcac--------------tctagaccagcctggccaacatagtgaaacgcggattcaact-aaaaaaatac-aaaaaaaa----attagccaagcat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 931927 128 - 2385121 cgatggttcatgcctgtaatcccagcactttgggaggc-tgaggcgggcaggtcac--------------tctagaccagcctggccaacgtagtgaaacccggattcaact-aaaaaaatac-aaaaaaaa----attagccaagcat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2376744 129 + 4274983 cgatggctcatgcctgtaatcccagcactttgggaggc-tgaggcgggcagatcac--------------tctagaccagtctggccaacatagtgaaacccggattcaact-aaaaaaatacaaaaaaaaa----attagccaaacat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28589208 140 + 49145316 cgatggctcgcgcctgaaatcccagcactttgagaagc-cgtggcgggcggatcacttgaggccgggcgttcgagaccagcctgcctaacttggtgaaacccggattcaact-aaaaaaatac--gaaaaaa-----ttagctaggcat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5434702 140 + 8899380 tgatggctcatgcctgtaatcccagcactttgagaagc-cgaggcgggcggatcacttgaggtcgggagttcgagaccagcctgtccagcgtggtgaaacccagattcaact-aaaaaaatat--gaaaaaa-----ttagccaggcat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644678 140 - 2680843 cgatggctcatgcctgtaatcccagcactttgagaagc-cgaggtgggcagatcacttgaggtcgggagttcgagaccagcctgcccaacgtggtgaaacccagattcaact-aaaaaaatac--gaaaaaa-----ttagccaggcat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 391821 141 - 4471408 tgatggctcatgccggtaatcccagcactttgagaagc-tgaggcgagcggatcacttgaggtcgggagttcaagaccagcctgcccaacgtggtgaaacccggattcaactaaaaaaaaaac--gaaaaaa-----ttagtcaggcat i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e dasNov3.JH563638 381834 111 + 643850 I e otoGar3.GL873654 5514642 72 + 5549422 I e mm10.chr7 111128913 286 - 145441459 I e canFam3.chr1 4645659 413 - 122678785 I e macNem1.NW_012011689v1 4569162 4950 - 13342542 I a score=973136.000000 s hg38.chr19_GL383574v1_alt 111296 137 + 155864 ggtggcgcgctcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgagcccaggaggcgaaggttgcagtgagccgaggtcgtgccactgcgctccagcctgggcaacaga-----------gtgagactccatctc s panTro5.chr19 36178917 137 + 61309027 ggtggcgcgctcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgagccccggaggcgaaggttgcagtgagctgaggtcatgccactgcgctccagcctgggcaacaga-----------gtgagactccatctc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39923165 137 + 64411610 ggtggcgtgctcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgagccccggaggggaaggttgcagtgagctgaggtcatgccactgcgctccagcctgggcaacaga-----------gtgagactccatctc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334854 136 - 8369475 ggtggcgcgctcctgtagtcccagctacttgggaggctgaggcaggaaaatctcttgagccc-ggaggcgaaggttgcagtgggccgaggtcatgccactgcgctccagcctgggcaacaga-----------gtgagactccatctc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63933219 132 - 106955855 ggtggcgcgctcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgagccccggaggcaaaggttgcagt-----gaggtcatgccactgcgctccagcctgggcaacaga-----------gtgagactccatctc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30247955 137 + 53671032 ggtggcgcgcttctgtagtcccagctacttgggaagctgaggcaggagaatcgcttgagccccagaggtgaaggttgcagtaagctgaggtcatgccactgtgctccagcctgggcaacaga-----------gtgagactccgtctc i rheMac8.chr19 C 0 I 9 s macFas5.chr19 34701863 137 + 59248254 ggtggcgcgcttctgtagtcccagctacttgggaagctgaggcaggagaatcgcttgagccccagaggtgaaggttgcagtaagctgaggtcatgccactgtgctccagcctgggcaacaga-----------gtgagactccgtctc i macFas5.chr19 C 0 I 9 s cerAty1.NW_012005268v1 5498442 137 + 7714307 ggtggcgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcgtaaacccaggaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggcggcaga-----------gcgagactccgtctc i cerAty1.NW_012005268v1 I 156 I 8 s chlSab2.chr6 29302455 137 + 50890351 ggtggcgcgcttctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgagccccagaggtgaaggttgcagtaagctgaggtcatgccactgtgctccagcctgggcaacaca-----------gtgagaccccctctc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 932055 137 - 2385121 ggtggcgcgcttctgtagtcccagctacttgggaagctgaggcaggagaatcgcttgagccccagaggtgaaggttgcagtaagctgaggtcatgccactgtgctccagcctgggcaacaga-----------gtgagactccgtctc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2376873 137 + 4274983 ggtggcgcacttctctagtccaagctacttgggaggctgaggcaggagaatcgcttgagccccagaggtgaaggttgcagtaagctgaggtcatgccagtgtgctccagcctaggcaacaga-----------gtgagactccgtctc i colAng1.NW_012111697v1 C 0 I 2 s calJac3.chr22 28589348 119 + 49145316 ggtgactcactcgtgtagtgccagctacttgggaggctgag----------cgctggagcc--------gaaggttgcagtgagccaaggtcctgatactgcattgcagcctgggcaacaga-----------gtgagactctatctc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5434842 130 + 8899380 ggtgactcactcctgtagtgccagctacttgggaggctgag----------cgctggagcc--------gatggttgcagtgagccaaggtcctgatactgcattgcagcctgggcaatgcagtcttactctggtaagactctgtctc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644818 117 - 2680843 ggtgactcactcctgtagtgccagctacttgggaggctgag----------cgctggagcc--------gatggttgcaatgagccaaggtcctgatactgcattgcagcctaggcaataga-----------gtgaga--ctatctc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 391962 119 - 4471408 ggtgacgcactcctgtagtgccagctacttgggaggctgag----------cgctggagcc--------gaaggttgcagtgagccaaggtcctgatactgcattgcagcctgggcaacaga-----------gtgagactctatctc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e dasNov3.JH563638 381834 111 + 643850 I e otoGar3.GL873654 5514642 72 + 5549422 I e mm10.chr7 111128913 286 - 145441459 I e canFam3.chr1 4645659 413 - 122678785 I e macNem1.NW_012011689v1 4569162 4950 - 13342542 I a score=73885.000000 s hg38.chr19_GL383574v1_alt 111433 10 + 155864 aaaaaa---aaaa s panTro5.chr19 36179054 10 + 61309027 aaaaaa---aaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39923302 10 + 64411610 aaaaaa---aaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6334990 10 - 8369475 aaaaaa---aaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63933351 10 - 106955855 aaaaaa---aaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30248101 10 + 53671032 aaaaaa---aaaa i rheMac8.chr19 I 9 C 0 s macFas5.chr19 34702009 10 + 59248254 aaaaaa---aaaa i macFas5.chr19 I 9 C 0 s macNem1.NW_012011689v1 4574112 10 - 13342542 aaaaaa---aaaa i macNem1.NW_012011689v1 I 4950 C 0 s cerAty1.NW_012005268v1 5498587 10 + 7714307 aaaaaa---aaaa i cerAty1.NW_012005268v1 I 8 C 0 s chlSab2.chr6 29302592 9 + 50890351 -aaaaa---aaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 932192 9 - 2385121 -aaaaa---aaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2377012 10 + 4274983 aaaaaa---aaaa i colAng1.NW_012111697v1 I 2 C 0 s calJac3.chr22 28589467 8 + 49145316 --aaaa---aaca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5434972 11 + 8899380 --aaaaaacaaca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644935 8 - 2680843 --aaaa---aaca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 392081 8 - 4471408 --aaaa---aaca i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e dasNov3.JH563638 381834 111 + 643850 I e otoGar3.GL873654 5514642 72 + 5549422 I e mm10.chr7 111128913 286 - 145441459 I e canFam3.chr1 4645659 413 - 122678785 I a score=7505.000000 s hg38.chr19_GL383574v1_alt 111443 11 + 155864 a--aaa------aga----aaTT-- s panTro5.chr19 36179064 7 + 61309027 a------------ga----aaTT-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39923312 8 + 64411610 a-----------aga----aTTT-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335000 13 - 8369475 aaaaaa------aga----aaTT-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63933361 19 - 106955855 aaaaaaaaaaacaaa----aaTT-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30248111 11 + 53671032 a--aaa------aga----aaTT-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34702019 11 + 59248254 a--aaa------aaa----aaGT-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4574122 11 - 13342542 a--aaa------aga----aaTT-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5498597 11 + 7714307 a--aaa------aag----aaGT-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29302601 11 + 50890351 a--aaa------gga----aaTT-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 932201 15 - 2385121 a--aaa------aaaaaagaaGT-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2377022 11 + 4274983 a--aaa------aga----aaTT-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28589475 12 + 49145316 a--caac-----aaa----aaTC-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5434983 12 + 8899380 a--caac-----aaa----aaTC-- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644943 11 - 2680843 a--caa------aaa----aaTC-- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 392089 11 - 4471408 a--caa------aaa----aaTC-- i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 381945 11 + 643850 ----AA------AAA----AACAAC i dasNov3.JH563638 I 111 C 0 e proCoq1.NW_012149263v1 601598 151 + 2501019 I e micMur3.chr22 3986605 519 - 30143674 I e otoGar3.GL873654 5514642 72 + 5549422 I e mm10.chr7 111128913 286 - 145441459 I e canFam3.chr1 4645659 413 - 122678785 I a score=399920.000000 s hg38.chr19_GL383574v1_alt 111454 41 + 155864 CATGTTTGC----GTCTCATC--------------GTTTCATGGTT--------TTATTTTTTTGC---C s panTro5.chr19 36179071 40 + 61309027 CACGTTTGC----GTCTCATC--------------ATTTCATGGTT--------TT-TTTTTTTGC---C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39923320 41 + 64411610 CATGTTTGC----GTCTCATC--------------ATTTCATGGTT--------TTATTTTTTTGC---C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335013 41 - 8369475 CATGTTTGC----GCCTCATC--------------ATTTCATGGTT--------TTATTTTTTTGC---C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63933380 41 - 106955855 CATGTTTGC----TTCTCATC--------------ATTTCATGGTT--------TTACTTTTTTGC---C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30248122 41 + 53671032 CATGTTTGC----TTCTCATC--------------ATTTCATGGTT--------TTATTTTTTTGC---C i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34702030 41 + 59248254 CATGTTTGC----TTCTCATC--------------ATTTCATGGTT--------TTATTTTTTTGC---C i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4574133 41 - 13342542 CATGTTTGC----TTCTCATC--------------ATTTCATGGTT--------TTATTTTTTTGC---C i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5498608 41 + 7714307 CATGTTTGC----TTCTCATC--------------ATTTCATGGTT--------TTATTTTTTTGC---C i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29302612 40 + 50890351 CATGTTTGC----TTCTCATC--------------ATTTCATGGTT--------TTATTTTTTT-C---C i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 932216 41 - 2385121 CATGTTTGC----TTCTCATC--------------ATTTCATGGTT--------TTATTTTTTTGC---T i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2377033 41 + 4274983 CATGTTTGC----TACTTACC--------------ATTTCATGGTT--------TTATTTTTTTGC---C i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28589487 42 + 49145316 CATGTTTGC----TT---ATT--------------ATTTCATGGTT----TTATTTTTTTTTTTGC---C i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5434995 36 + 8899380 CATGTTTGC----TT---ATC--------------ATTTCATGG----------TTTTTTTTTTTC---C i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644954 45 - 2680843 CATGTTTGC----TT---ATC--------------ATTTCATGGTTTTA-TTATTTTATTTTTTGC---C i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 392100 46 - 4471408 CATGTTTGC----TT---ATC--------------ATTTCATGGTTTTATTTACTTATTTTTTTGC---C i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 601749 43 + 2501019 CATGTTTGC----TTCTCATC--------------ATTTCATGGTT--------TTTTTTTTTTTTACT- i proCoq1.NW_012149263v1 I 151 C 0 s otoGar3.GL873654 5514714 58 + 5549422 CATGTTTGCAAAATTTTTCTCTGTCTCAGTGTTATATTTCATGGTT--------TTATTTTAAGTA---- i otoGar3.GL873654 I 72 C 0 s dasNov3.JH563638 381956 41 + 643850 TATATTTGC----TTCTCATT--------------ATTTCATGGTT--------TTATTTTTTTAC---T i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3986605 519 - 30143674 I e mm10.chr7 111128913 286 - 145441459 I e canFam3.chr1 4645659 413 - 122678785 I a score=68935.000000 s hg38.chr19_GL383574v1_alt 111495 5 + 155864 TTTA---G s panTro5.chr19 36179111 5 + 61309027 TTTA---G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39923361 5 + 64411610 TTTA---G i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335054 5 - 8369475 TTTA---G i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63933421 5 - 106955855 TTTA---G i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30248163 5 + 53671032 TTTA---G i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34702071 5 + 59248254 TTTA---G i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4574174 5 - 13342542 TTTA---G i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5498649 5 + 7714307 TTTA---G i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29302652 5 + 50890351 TTTA---G i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 932257 5 - 2385121 TTTA---G i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2377074 5 + 4274983 TTTA---G i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28589529 5 + 49145316 TTTA---G i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5435031 5 + 8899380 TTTA---A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1644999 5 - 2680843 TTTA---A i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 392146 5 - 4471408 TTTA---G i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3987124 5 - 30143674 ttta---a i micMur3.chr22 I 519 C 0 s proCoq1.NW_012149263v1 601792 8 + 2501019 TTTAGGTA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5514772 5 + 5549422 TTTA---A i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 381997 5 + 643850 TTTA---G i dasNov3.JH563638 C 0 I 8 e mm10.chr7 111128913 286 - 145441459 I e canFam3.chr1 4645659 413 - 122678785 I a score=154873.000000 s hg38.chr19_GL383574v1_alt 111500 10 + 155864 TCTACCTAAA s panTro5.chr19 36179116 10 + 61309027 TCTACCTAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39923366 10 + 64411610 TCTACCTAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335059 10 - 8369475 TCTACCTAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63933426 10 - 106955855 TCTACCTAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30248168 10 + 53671032 TCTACCTAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34702076 10 + 59248254 TCTACCTAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4574179 10 - 13342542 TCTACCTAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5498654 10 + 7714307 TCTACCTAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29302657 10 + 50890351 TCTACCTAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 932262 10 - 2385121 TCTACCTAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2377079 10 + 4274983 TCTACCTAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28589534 10 + 49145316 TCTACCTAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5435036 10 + 8899380 TCTACCTAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1645004 10 - 2680843 TCTACCTAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 392151 10 - 4471408 TCTACCTAAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3987129 10 - 30143674 tccacttaaa i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 601800 10 + 2501019 TTTACTTAAA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5514777 7 + 5549422 T---CTTAAG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4646072 10 - 122678785 TCTATTTAAA i canFam3.chr1 I 413 C 0 s dasNov3.JH563638 382010 10 + 643850 TTGACTTAAA i dasNov3.JH563638 I 8 C 0 e mm10.chr7 111128913 286 - 145441459 I a score=1095990.000000 s hg38.chr19_GL383574v1_alt 111510 74 + 155864 ATTCA-TTCTTGGTTTAAAATATGAAATATTTTGTAAATGGC----TAGTCA---GTTCCAGATTTATTGAATAATATGTAA s panTro5.chr19 36179126 74 + 61309027 ATTCA-TTCTTGGTTTAAAATATGAAATATTTTGTAAATGGC----TAGTCA---GTTCCAGATTTACTGAATAATATGTAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39923376 74 + 64411610 ATTCA-TTCTTGGTTTAAAATATGAAATATTTTGTAAATGGC----TAGTCA---GTTCCAGATTTATTGAATAATATGTAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335069 74 - 8369475 ATTCA-TTCTTGGTTTAAAATATGAAATATTTTGTAAATGGC----TAGTCA---TTTCCAGATTTATTGAATAATATGTAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63933436 74 - 106955855 ATTCA-TTCTTGGTTTAAAATATGAAATATTTTGTAAATGGC----TAGTCA---GTTCCAGATTTATTGAATAATATGTAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30248178 74 + 53671032 ATTCA-TTCTTGGTTTAAAATATGAAATATTTTCTAAATGGC----TAGTCA---GTTCCAGATTTATTCAATAATATGTAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34702086 74 + 59248254 ATTCA-TTCTTGGTTTAAAATATGAAATATTTTCTAAATGGC----TAGTCA---GTTCCAGATTTATTCAATAATATGTAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4574189 74 - 13342542 ATTCA-TTCTTGGTTTAAAATATGAAATATTTTCTAAATGGC----TAGTCA---GTTCCAGATTTATTCAATAATATGTAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5498664 74 + 7714307 ATTCA-TTCTTGGTTTAAAATATGAAATATTTTCTAAATGGC----TAGTCA---GTTCCAGATTTATTCAATAATATGTAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29302667 70 + 50890351 ATTCA-TTCTTGGTTTAAAATATGAAATATTTTCTAAATGGC----TAGTC-------CCAGATTTATTCAATAATATGTAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 932272 74 - 2385121 ATTCA-TTCTTGGTTTAAAATATGAAATATTTTCTAAATGGC----TAGTCA---GTTCCAGATTTATTCAATAATATGTAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2377089 74 + 4274983 ATTCA-TTCTAGGTTTAAAATATGAAATATTTTCTAAATGGC----TACTCA---GTTCCAGATTTATTGAATAATATGTAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28589544 77 + 49145316 ATTCA-TTTTTGGTTTAAAATATAAAGTATTTTCTAAATGGC----TAGTCAGTAGTTCCAGATTTGTTGAATAATATGTAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5435046 78 + 8899380 ATTCATTTTTTGGTTTAAAATGTAAAGTATTTTCTAAATGGC----TAGTCAGTTGTTCGAGATTTATTGAATAATATGTAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1645014 74 - 2680843 ATTCA-TTTTTGGTTTAAAATATGAAGTATTTTCTAAATGGC----TAGTCA---GTTCCAGATTTATTGAATAATATGTAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 392161 77 - 4471408 ATTCA-TTTTTGGTTTAAAATATGAAGTATTTTCTAAATGGC----TAGTCAGTTGTTCCAGATTTATTGAATAATATGTAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3987139 75 - 30143674 attca-tttttggtttaagatatgaactatcttccaaatggc----tagtca-ctgttccaa-tttattgaataagctatAA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 601810 75 + 2501019 ATTTA-TTTTTGGTTTAAGATATGAAATATTTTCCAAATGGC----TAGTCA-TTGTTCCAA-TTTATTGAATAACCTGTAA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5514784 77 + 5549422 TTTTG-TTTTTGGTTTAAAATATGAAATGTTTTCCAAATGGC----TAGTCCTTTGTTGCAATTTTATTGAATAATCTGTAA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111129199 56 - 145441459 ATTTG-TTTTTATTTT----TAAGACATATTTCCCAAGTGGCAGTATAGTCA-----TCCAG----------------GTAA i mm10.chr7 I 286 C 0 s canFam3.chr1 4646082 73 - 122678785 GTTTC-ATTTTGGTGTAAGATATGAAATATTTTCCAAATGAT----TAGTT----GACCCAGTTTTATCGAATAGGCTGTGA i canFam3.chr1 C 0 I 198 s dasNov3.JH563638 382020 76 + 643850 TTTTA-TTTTTCATTTAAGATATGAAATATTTTCTTAAAGGC----TAGTCATTTGTCCCAATTTTATTGAATAAC-TATAA i dasNov3.JH563638 C 0 C 0 a score=35870.000000 s hg38.chr19_GL383574v1_alt 111584 7 + 155864 GCTTTAT s panTro5.chr19 36179200 7 + 61309027 GCTTTAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39923450 7 + 64411610 GCTTTAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335143 7 - 8369475 GCTTTAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63933510 7 - 106955855 GCTTTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30248252 7 + 53671032 ACTTTAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34702160 7 + 59248254 ACTTTAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4574263 7 - 13342542 ACTTTAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5498738 7 + 7714307 ACTTTAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29302737 7 + 50890351 ACTTTAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 932346 7 - 2385121 ACTTTAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2377163 7 + 4274983 ACTTTAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28589621 7 + 49145316 ATTTTAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5435124 6 + 8899380 A-CTTAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1645088 6 - 2680843 A-CTTAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 392238 7 - 4471408 ACTTTAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3987214 6 - 30143674 C-TTTAT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 601885 6 + 2501019 C-TTTAT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5514861 3 + 5549422 C----AT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111129255 7 - 145441459 CCATTGT i mm10.chr7 C 0 C 0 s dasNov3.JH563638 382096 4 + 643850 ---CTGC i dasNov3.JH563638 C 0 C 0 e canFam3.chr1 4646155 198 - 122678785 I a score=2081036.000000 s hg38.chr19_GL383574v1_alt 111591 151 + 155864 CATTTTATCA---TATTTTAGACTAAAAGTTCTAAGTG-TATGTTTGT-AAGGG-CTACTT-ACAAAGTTCATATTTACATTTTGTGTGTGCTTAGATGTTTTCAAGTGTCTTTAAAA-ATCACAGTATTTTCTTTTCACAGTATC------------TTCACAATATTTT s panTro5.chr19 36179207 151 + 61309027 CATTTTATCA---TATTTTAGACTAAAAGTTCTAAGTG-TATGTTTGT-AAGGG-CTACTT-ACAAAGTTCATATTTACATTTTGTGTGTGCTTAGATGTTTTCAAGTTTCTTTAAAA-ATCACAGTATTTTCTTTTCACAATATC------------TTCACAATGTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39923457 151 + 64411610 CATTTTATCA---TATTTTAGACTAAAAGTTCTAAGTG-TATGTTTGT-AAGGG-CTACTT-ACAAAGTTCATATTTACATTTTGTGTGTGCTTAGATGTTTTCAAGTTTCTTTAAAA-ATCACAGTATTTTCTTTTCACAATATC------------TTCACAATGTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335150 151 - 8369475 CATTTTATCA---TATTTTAGACTAAAAGTTCTAAGTG-TATGTTTGT-AAGGG-CTACTT-ACAAAGTTCATATTTACATTTTGTGTGTGCTTAGATGTTTTCAAGTTTCTTTAAAA-ATCACAGTATTTTCTTTTCACAATATC------------TTCACAATATTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63933517 152 - 106955855 CATTTTATCA---TATTTTAGACCAAAAGTTCTAAGTATTATGTTTGT-AAGGG-CTACTT-ACAAAGTTCATATTTAGATTTTGTGTATGCTTAGATGTTTGCAAGTTTCTTTAAAA-ATCACAGTATTTTCTTTTTACAATATC------------TTCACAATATTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30248259 151 + 53671032 CATTTTATCA---TATTTTAGACCAAAAGTTCTAAGTA-TATGTTTGT-AAGGG-CTACTT-ACAAAGCTTATATTTAGATTTTGTGTATGCTTAGATGTTTTCAAGTTTCTTTAAAA-ATCACAGTATTTTCTTTTCACAATATC------------TTCACAATATTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34702167 151 + 59248254 CATTTTATCA---TATTTTAGACCAAAAGTTCTAAGTA-TATGTTTGT-AAGGG-CTACTT-ACAAAGCTTATATTTAGATTTTGTGTATGCTTAGATGTTTTCAAGTTTCTTTAAAA-ATCACAGTATTTTCTTTTCACAATATC------------TTCACAATATTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4574270 151 - 13342542 CATTTTATCA---TATTTTAGACCAAAAGTTCTAAGTA-TATGTTTGT-AAGGG-CTACTT-ACAAAGCTTATATTTAGATTTTGTGTATGCTTAGATGTTTTCAAGTTTCTTTAAAA-ATCACAGTATTTTCTTTTCACAATATC------------TTCACAATATTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5498745 151 + 7714307 CATTTTATCA---TATTTTAGACCAAAAGTTCTAAGTA-TATGTTTGT-AAGGG-CTACTT-ACAAAGCTCATATTTAGATTTTGTGTATGCTTAGATGTTTTCAAGTTTCTTTAAAA-ATCACAGTATTTTCTTTTCACAGTATC------------TTCACAATATTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29302744 151 + 50890351 CATTTTATCA---TATTTTAGACCAAAAGGTCTAAGTA-TATGTTTGT-AAGGG-CTACTT-ACAAAGCTCATATTTAGATTTTGTGTATGCTTAGATGTTTTCAAGTTTCTTTAAAA-ATCACAGTATTTTCTTTTTACAATATC------------TTCATAATATTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 932353 151 - 2385121 CATTTTATCA---TATTTTAGACCAAAAGTTCTAAGTA-TATGTTTGT-AAGGG-CTACTT-ACAAAGCTCATATTTAGATTTTGTGTATGCTTAGATGTTTTCAAGTTTCTTTAAAA-ATCACAGTATTTTCTTTTCACAATATC------------TTCACAATATTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2377170 151 + 4274983 CATTTTATCA---TATTTTAGACCAAAAGTTCTAAGTA-TATGTTTGT-AAGGG-CTACTT-AGAAAGCTCATATTTAGATTTTGTGTATGCTTAGATGTTTTCAAGTTTCTTTAAAA-ATCACAGTATTTTCTTTTCACAATATC------------TTCACAATATTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28589628 146 + 49145316 CATTTTATCA---TATTTTAGACGAGAAGTTCTAAAAA-TATGTTTGT-AAGGG-CTACTT-ACAAAATTCATATTTAGATTTCATGTATGCTTAGATGTTTTCAAGTTTCTTTAAAA-ATCACAGTATTTTC-----ACAATATC------------TTCACAATATTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5435130 134 + 8899380 CGTTTTATCA---TATTTTAGACCAGAATTTTTAAATA-TATGTTTGT-AAGGG-CTACTT-ACAAAGTTCATATTTAGATTTAATGTATGCTTAGATG------------TTTAAAA-Atcacgatattttc-----acaatatc------------ttcacaatatttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1645094 146 - 2680843 CATTTTATCA---CATTTTAGACCAGAAGTTCTAAATA-TATGTTTAT-AAGGG-CTACTT-ACAAAGTTCATATTTAGATTTCATGTATGCTTAGATGTTTTCAAGTTTCTTTAAAA-ATGACTGTATTTTC-----ACAATATC------------TGCACAATATTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 392245 158 - 4471408 CATTTTATCA---TATTTTAGACCAGAAATTCTAAATA-TATGTTTGT-AAGGG-CTACTT-ACAAAGTTCATATTTAGATTTCATATATGCTTAGATGTTTTCAAGTTTCTTTAAAA-ATCACAGTATTTTC-----ACAATATCTTGTTTAAAATTTTCACAATATTTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3987220 152 - 30143674 CATTTTATCA---TATCTTAGACCTAAAGTTCTAATTA-TGTC-CTGT-AACGG-CTACTTAACAAATTTCATATTTGGATTTTGTGTATGTTTAGGTGTTTTCAAGTTTCATGAAAATATCACAGTATTTTCTTTTCACAGTATC------------TTCACAATAGTCT i micMur3.chr22 C 0 I 6 s proCoq1.NW_012149263v1 601891 148 + 2501019 TATTTT---A---TATTTTAGACCTAAAGTTCTAAGTA-TGTG-TTGT-AAGGG-CTACTT-ACAAATTTCGTATTTAGATTTTGAGTATGTTTAGGTGTTTTCAAGTTTCTTGAAAATGTCACAGTATTTTCTTTTCACAGTATC------------ACCTCAATATCTT i proCoq1.NW_012149263v1 C 0 I 13 s otoGar3.GL873654 5514864 150 + 5549422 CATTTTATCA---CATTTTAGGCGTAAAGTTCTGTGTG-TGTG-TGTG-TGTGG-CTATGC-ACAAATTTCATATTCAGATTTTGTGTG-GTTTAGATGTTTTCACGTTTCTTGAAAATATCCCAGTATTTTCTTTTCCCACTGTC------------ATTACAGTATCTT i otoGar3.GL873654 C 0 I 18 s mm10.chr7 111129262 132 - 145441459 TGTCTTATTATCTTATTTTAGGCTTAAAGTTCTAAGAA-TGTATTTGTAAAAGA-CTACTT-GCGAGCTT--------GATTCGGTGTGCGTTTGGAGGTTTTTATGTGCCTTGAAAA-----TAGTAAGTTTT----------TC------------CTTGTAATCTTT- i mm10.chr7 C 0 C 0 s canFam3.chr1 4646353 123 - 122678785 CATTTTGTCA---TATTTTAGATCTAAAGTTCTCAGTA-TGTGTTTAT-AAGGGACTACTC-ACAAATTTGATATTTAGGTTTTGTGTATGCT-----GTTTTTAAATTTC------A-TCCGCAGGATCTTTTTTTCTTA------------------------------ i canFam3.chr1 I 198 C 0 s dasNov3.JH563638 382100 124 + 643850 CATTTAAACA---TATTTTAACCCTAAAGTTCTAAATA-TGTGTTTGTAAAGGG-CTACTT-AAAATTTTTATGTCTAGATTTTGCCTATATTAAAACGTTTTCAAGTTCCATTCATA-GT-ATGGTATTTT--------------------------------------- i dasNov3.JH563638 C 0 C 0 a score=48747.000000 s hg38.chr19_GL383574v1_alt 111742 11 + 155864 GTTTTAAAAAG s panTro5.chr19 36179358 11 + 61309027 GTTTTAAAAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39923608 11 + 64411610 GTTTTAAAAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335301 11 - 8369475 GTTTTAAAAAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63933669 10 - 106955855 GTTTTAAAAA- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30248410 11 + 53671032 GTTTTAGAAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34702318 11 + 59248254 GTTTTAGAAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4574421 11 - 13342542 GTTTTAGAAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5498896 11 + 7714307 GTTTTAGAAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29302895 11 + 50890351 GTTTTAGAAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 932504 11 - 2385121 GTTTTAGAAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2377321 11 + 4274983 GTTTTAGAAAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28589774 8 + 49145316 GTTT---TAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5435264 8 + 8899380 GTTT---AAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1645240 8 - 2680843 CTTT---AAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 392403 8 - 4471408 GTTA---AAAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3987378 10 - 30143674 -TTTTTGAAAA i micMur3.chr22 I 6 C 0 s otoGar3.GL873654 5515032 10 + 5549422 -ttttttaaga i otoGar3.GL873654 I 18 C 0 s mm10.chr7 111129394 4 - 145441459 ------AAAA- i mm10.chr7 C 0 C 0 s dasNov3.JH563638 382224 4 + 643850 -TTTT------ i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 602039 13 + 2501019 I e canFam3.chr1 4646476 0 - 122678785 C a score=8312977.000000 s hg38.chr19_GL383574v1_alt 111753 479 + 155864 AAATCATTTTCCAATACAAGTACAGGGAATA----TTTCATGTTTGAGA-TTTTTTTTTT----------CTT-TTTAAAGCAAAAAGTTTAG-------TTTATTGCCGTTTCATTTGCTTTCTTGCTGACAAGATAACAAACTCCATATGAAGAGTTCAGGTTTGTTGTGGCAACTTTTCAGTGTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTGGCATTGGAGACCAAGATAGAAAAGTTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCCAGATGTTTGGAAG--AC--CATGTTTT-AAGCATCC--TT----T---TTTTTTTTTT--TA--AGCAAATTGCACATGATTCTGT-GAAAATTTTAGTAAATGTTTGTTCTGTTGAAAACCTATAGCCTAATACATCAGG------ATCCATGTGTCAAGTGGGTCTTCCAAGTCTATAGG-AAATAATTGTTTCTGAAAGCTAGCAGGCTGGG s panTro5.chr19 36179369 476 + 61309027 AAATCATTTTCCAATACAAGTACAGGGAATA----TTTCATGTTTGAGA-TTTTTTTTTT---------TCTT-TTTAAAGCAAAAAGTTTAG-------TTTATTGCCGTTTCATCTGCTTTCTTGCTGACAAGATAACAAACTCCATATGAAGAGTTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGTTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCCAGATTTTTGGAAG--AC--CATGTTTT-AAGCATCC--TT----T---TTTTTTAAT--------GCAAATTGCACATGATTCTGT-GAAAATTTTAGTAAATGTTTATTCTGTTGAAAACCTATAGCCTAATACGTCAGG------ATCCATGTGTCAAGTGGGTCTTCCAAGTCTATAGG-AAATAATTGTTTCTGAAAGCTAGCAGGCTGGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39923619 476 + 64411610 AAATCATTTTCCAATACAAGTACAGGGAATA----TTTCATGTTTGAGA-TTTTTTTTTT----------CTT-TTTAAAGCAAAAAGTTTAG-------TTTATTGCCGTTTCATCTGCTTTCTTGCTGACAAGATAACAAACTCCATATGAAGAGTTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTACGTTAGCATTGGAGACCAAGATAGAAAAGTTCTCAAATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCCAGATTTTTGGAAG--AC--CATGTTTT-AAGCATCC--TT----T---TTTTTTTAAT-------GCAAATTGCACATGATTCTGT-GAAAATTTTAGTAAATGTTTATTCTGTTGAAAACCTATAGCCTAATACGTCAGG------ATCCATGTGTCAAGTGGGTCTTCCAAGTCTATAGG-AAATAATTGTTTCTGAAAGCTAGCAGGCTGGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335312 475 - 8369475 AAATCATTTTCCAATACAAGTACAGGGAATA----TTTCATGTTTGAGA-TTTTTTTTT-----------CTT-TTTAAAGCAAAAAGTTTAG-------TTTATTGCCGTTTCATTCGCTTTCTTGCTGACAAGATAACAAACTCCATATGAAGAGTTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGTTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCCAGATTTTTGGAAG--AC--CATGTTTT-AAGCATCC--TT----T---TTTTTTTTAA-------GCAAATTGCACATGATTCTGT-GAAAATTTTAGTAAATGTTTATTCTGTTGAAAACCTATAGCCTAATACATCAGG------ATCCATGTGTCAAGTGGGTCTTCCAAGTCTATAGG-AAATAATTGTTTCTGAAAGCTAGCAGGCTGGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63933679 481 - 106955855 AAATCATTTTCCAACACAAGTCCAGGGAATA----TTTCATGTTTGAGA-TTTTTTTTTT----------CTT-TTTAAAGCAAAAAGTTTAG-------TTTATTGCCGTTTCATTTGCTTTCTTGCTGACAAGATAACAAACTCCATATGAAGAGTTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGTTCTCAGATTCCCTTGGCAAGCTTAGA--TTTTTCGATCTAAAATTATCTCCGGATTTTTGGAAG--AC--CATGTTTT-AAGCATCC--TT----T---TTTTTTTTTTTTTA--AGCAAATTGCACATGATTCTGT-GAAAATTTTAATAAATGTTTATTCTGTTGAAAACCTATAGCCTAATACATCAGG------ATCCATGTGTCAAGTGGGTCTTCCAAGTCTATAGG-AAATAATTGTTTCTGAAAGCTAGCAGACTGGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30248421 485 + 53671032 AAATCATTTTCCAATACAAGTCCAGGGAATA----TTTCATGTTTGAGA-TTTTTTTTTCTT-----TTTATC-TTTAAAACAAAAAGTTTAG-------TTTATTGCCGTTTCATTTGCTTTCTTGCTGACAGGATAACAAACTCCATATGAAGAGTTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGTTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCCGGATTTTTGGAAG--AC--CATGTTTT-AAGCATCC--TT----T---TTTTTTTTTT--TA--AGCAAATTGCACATGATTCTGT-GAAAATTTTAGTAAATGTTTATTCTGTTGAAAACCTATAGCCTAATACATCAGG------ATCCATGTGTCAAGTGGGTCTTCCAAGTCTGTAGGAAAATAATTGTTTCTGAAAGCTAGCAGGCTGAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34702329 486 + 59248254 AAATCATTTTCCAATACAAGTCCAGGGAATA----TTTCATGTTTGAGA-TTTTTTTTTCTT-----TTTATC-TTTAAAACAAAAAGTTTAG-------TTTATTGCCGTTTCATTTGCTTTCTTGCTGACAGGATAACAAACTCCATATGAAGAGTTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGTTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCCGGATTTTTGGAAG--AC--CATGTTTT-AAGCATCC-TTT----T---TTTTTTTTTT--TA--AGCAAATTGCACATGATTCTGT-GAAAATTTTAGTAAATGTTTATTCTGTTGAAAACCTATAGCCTAATACATCAGG------ATCCATGTGTCAAGTGGGTCTTCCAAGTCTGTAGGAAAATAATTGTTTCTGAAAGCTAGCAGGCTGAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4574432 487 - 13342542 AAATCATTTTCCAATACAAGTCCAGGGAATA----TTTCATGTTTGAGA-TTTTTTTTTCTT-----TTTATC-TTTAAAACAAAAAGTTTAG-------TTTATTGCCGTTTCATTTGCTTTCTTGCTGACAGGATAACAAACTCCATATGAAGAGTTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGTTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCCGGATTTTTGGAAG--AC--CATGTTTT-AAGCATCCTTTT----T---TTTTTTTTTT--TA--AAAAAATTGCACATGATTCTGT-GAAAATTTTAGTAAATGTTTATTCTGTTGAAAACCTATAGCCTAATACATCAGG------ATCCATGTGTCAAGTGGGTCTTCCAAGTCTGTAGGAAAATAATTGTTTCTGAAAGCTAGCAGGCTGGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5498907 479 + 7714307 AAATCATTTTCCAATACAAGTCCAGGGAATA----TTTCATGTTTGAGA-TTTTTTTTTCTT-----TTTATC-TTTAAAACAAAA-----AG-------TTTATTGCCGTTTCATTTGCTTTCTTGCTGACAAGATAACAAACTCCATATGAAGAGTTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGTTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCCGGATTTTTGGAAG--AC--CATGTTTT-AAGCATCC---T----T---TTTTTTTTTT--TA--AGCAAATTGCACATGATTCTGT-GAAAATTTTAGTAAATGTTTATTCTGTTGAAAACCTATAGCCTAATACATCAGG------ATCCATGTGTCAAGTGGGTCTTCCAAGTCTGTAGGAAAATAATTGTTTCTGAAAGCTAGCAGGCTGGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29302906 487 + 50890351 AAATCATTTTCCAGTACAAGTCCAGGGAATA----TTTCATGTTTGAGATTTTTTTTTTCTT-----TTTATC-TTTAAAACAAAAAGTTTAG-------TTTATTGCCGTTTCATTTGCTTTCTTGCTGACAAGATAACAAACTCCATATGAAGAGTTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGTTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCCGGATTTTTGGAAG--AC--CATGTTTT-AAGCATCC-TTT----T---TTTTTTTTTT--TA--AGCAAATTGCACATGATTCTGT-GAAAATTTTAGTAAATGTTTATTCTGTTGAAAACCTATAGCCTAATACATCAGG------ATCCATGTGTCAAGTGGGTCTTCCAAGTCTATAGGAAAAGAATTGTTTCTGAAAGCTAGCAGGCTGGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 932515 485 - 2385121 AAATCATTTTCCAATACAAGTCCAGGGAATA----TTTCATGTTTGAGA-TTTTTTTTTCTT-----TTTCTC-TTTAAAACAAAAAGTTTAG-------TTTATTGCCGTTTCATTTGCTTTCTTGCTGACAAGATAACAAACTCCATATGAAGAGTTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGTTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCCGGATTTTTGGAAG--AC--CATGTTTT-AAGCATCC--TT----T---TTTTTTTTTT--TA--AGCAAATTGCACATGATTCTGT-GAAAATTTTAGTAAATGTTTATTCTGTTGAAAACCTATAGCCTAATACATCAGG------ATCCATGTGTCAAGTGGGTCTTCCAAGTCTGTAGGAAAATAATTGTTTCTGAAAGCTAGCAGGCTGGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2377332 484 + 4274983 AAATCATTTTCCAGTACAAGTCCAGGGAATA----TTTCATGTTTGAGA-TTTTTTTTTCTT-----TTTATC-TTTAAAACAAAAAGTTTAG-------TTTATTGCTGTTTCATTTGCTTTCTTGCTGACAAGAT---AAACTCCATATGAAGAGTTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGTTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCCGGATTTTTGGAAG--AC--CATGTTTT-AAGCATCCCTTT----T---TTTTTTTTTT--TA--AGCAAATTGCACATGATTCTGT-GAAAATTTTAGTAAATGTTTATTCTGTTGAAAACCTATAGCCTAATACATCAGG------ATCCATGTGTCAAGTGGGTCTTCCAAGTCTATAGGAAAATAACTGTTTCTGAAAGCTAGCAGGCTGGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28589782 482 + 49145316 AAATCATTTTCCGTTACAAGTCCAGGGAATA----TTTCATGTTTGAGA---TTTTTTTCTT-----TTTATC-TTTAAAGCAAAAAGTTTAG-------TTAAATTACATTTCATTTGCTTTCTTGCTGACAAGATAACAAACTTCATATGAAGAATTCAGGTTTGGTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACCAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGTTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCTGGATTTTTGGAAG--AC--CTTGTTTTAAAGCATCC-TTT----T---TTTTTTTTTT------AGCACATTGCATGTGATTCTGC-GAAAATTTTAGTAAATGTTTATTCTGTTGAAAACCTGTAGCCTAATACACCAGG------ATCCATGTGTCAAGTGGGTCTTCCAAGTCTATAGGAAAATAATTGTTTCTG-AAGCTAGCAGGCTGGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5435272 485 + 8899380 AAATCGTTTTCCATTACAAGTCCAGGAAACA----TTTCATGTTTGTGA----TTTTTTCTT-----TTTATC-TTTAAGGCAAAAAGTTTAG-------TTAATTGCCACTTCATTTGCTTTCTTGTTGACAAGATAACAAACTCCATATGAAGAATTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAGAGTTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCTGGATTTTTGGAAG--AC--CTTGTTTT-AAGCATCC-TTT----T---TTTTTTTTTTTTAA--AGCACATTGCACGTGATTCTGT-GAAAATTTTAGTAAATGTTTATTCTGTTGAAAACCTGTAGCCTAATACACCAGG------ATCCATGTGTCAAGTGGGTCTTCCAAGTCTATAGGAAAATAATTGTTTCTGAAAGCTAGCAGGCTGGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1645248 484 - 2680843 AAATCATTTTCCATTACAAGTCCAGGGAATA----TTTCATGTTTGAGA---TTTTTTTCTT-----TTTATC-TTTAAAGCAAAAAGTTTAG-------TTAATTGCCACTTCATTTGCTTTCTTGCTGACAAGATAACAAACTCCATATGAAGAATTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGTTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCTGGATTTTTGGAAG--AC--CTTGTTTT-AAGCATCC-TTT----T---TTTTTTTTTT--TA--AGCACATTGCATGTGATTCTGC-GAAAATTTGAGTAAATGTTTATTCTGTTGAAAACCTGTAGCCTAATATACCAGG------ATCCATGTGTCAAGTGGGTCTTCCAAGTCTATAGGAAAATAATTGTTCCTGAAAGCTATCAGGCTGGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 392411 491 - 4471408 AAATCATTTTCCATTACAAGTCCAGGGAATA----TTTCATGTTTGAGA---TTTTTTTCTT-----TTTGTC-TTTAAAGCAAAAAGTTTAG-------TTAATTGCCATTTCATTTGCTTTCTTGCTGACAAGATAACAAACTCCATATGAAGAATTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGTTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCTGGATTTTTGGAAG--AC--CTTGTTTT-AAGCATCt-ttt----t---tttttttttt-ttA--AGCACATTGCACGTGATTCTGC-GAAAATTTTAGTAAATGTTTATTCTATTGAAAACCTGTAGCCTAATACACCAGGATCCATATCCATATGTCAAGTGGGTCTTCCAAGTCTATAGGAAAATAATTGTTTCTGAAAGCTAGCAGGCTAGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3987388 486 - 30143674 ---TCCTTTCCATTTACAAGTCCAGGGAATA----TTTCATATTTGA-C---ATTTTTTCTT-----TTCATCTTTTAAAGCAAAAAGTTTAG-------TTTATTGCTGTCTCATTTGCCTTCTTGCTGACAAGATAACAAACTCCATATGAAGAGTTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGCTCTCAGATTCCCTTGGCAAGCCTAGA-TTTTTTCAATCTAAAATTATCTCTGGATTTTTGGAAGACAC--CATGTTTT-AAGCATCT-TTT----T---TTTTTTTTTT--TAAGAACAAGTTGCACGTGATTCTGT-GAAAATTTTACTAAACATTTATGTTGTTGAAAACCTGAGGCCTAACATACCAGG------AGCTATGTATAAAGTGGGTCTTCCAAATCCATAGGAAAATAATTGTCTCTGAGAGCTAGCAGGCTGGG i micMur3.chr22 C 0 I 25 s proCoq1.NW_012149263v1 602052 489 + 2501019 AAATCCTTTTCCTTTGCAAGTCCAGGGAATA----TTTCATATTTGAGT---TTTTTTTCTT-----TTTGTCTTTTAAAGCAAAAAGTTTAG-------TTTATGGCTGTCTCATTTGCCTTCTTGCTGACAAGATAACAAACTCCATATGAAGAGTTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGCTCTCAGATTCCCTTGGCAAGCCTGGA--TTTTTCAATCTAAAATTATCTCTGGATTTTTGGAAGACAC--CATGTTTT-AAGCAttt-ttt----t---tttttttttt--tAAGAACAAGTTGCACATGATTCTGT-GAAAATTTTACTAAATGTTTATTTTGTTGAAAACCTGAGGCCTAACACACCAGG------AGCTATGTGTGAAGTGCGTCTTCCAAATCCATAGGAAAATAATTATATCTGAGAGCTAGTAGGCTGGG i proCoq1.NW_012149263v1 I 13 I 25 s otoGar3.GL873654 5515042 487 + 5549422 tttttttttttttttaCAAGTTCAGGGAATA----TTTCATGTTTGAGA---TTTTTTTCTT-----TGTATCTTTTAAAGCAAAAA-TTTAG-------TTTATTGCTGTTTGATTTGCCTTCTTGCTAACAAGGTAACAAACTCCATATGAAGAGTTCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACAAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGCTCTCAGATTCCCTTGGCAAGCTTAGA--TTTTTCAATCTAAAATTATCTCTGGATTTTTGGAAGACAC--CATGTTTT-AAGCATCC-TCTCTCCT---TTTTTTTTTT--TAAGAGCAAGTTGCACATGATTCTGT-GAAAATTTTACTAAATGTTTACTTTGTCAAAAACCTGAGGCCTAATACACTAGG------AGCTGTGTGTGAAATGAGTCTTCCAAATCTATAGGAAAATGACT-----TAAGAGCGAGCAGGCTAGG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111129398 475 - 145441459 AGATCATTT-CTTTTACAAGTTCAGAGAATACTTTCTTTATATTTGATA-TTTATGTGTGTGATACATATACA-TATAAGATATACATATTAAACAAGGTTTTATTGCTGTTTTATTTGCTTTCTTGCTGACAAGATCACAGACTCCATATGAAGAGTGCAAGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACGAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGTTCTCAGATTCCCTTGGCAAGCCTAGATTTTTTTCAATCTAAAATTATCTCTGGATTTTTGGAAG--ACCGCATGCTTT-AAGCATCC--TT----T---------------AA--AAAAAAAAACAAATAC-----A-AAATACTTTGCTAAATAATTTTTCTGTTGAGAACTTGAAGCCTACTATAGCAGG------AGCTGTGCGTCTCCTAGGTCTTCTGCAT-TCCAGGGAAGTCA-------------CTAGCAGGCTCCA i mm10.chr7 C 0 C 0 s canFam3.chr1 4646476 482 - 122678785 --ATCATTTTCCTTTACGAGACTAGGAAATA----GGTCATGTTTGAGA---TTTTTTTTTT-----TTCTTT-TTTAAAGTGAAAAGTTCAG-------TTTATTG---TTTCAT-TGCTTTCTTGCTGACAAGATAACAAACTCCATATGAAGAGTGCAGGTTTGTTGTGGCAACTTTTCAGTCTGGCATTTGAGATTCTAATCTTCCTCTATTTTTGCACACGAATACGTAGGTTAGCATTGGAGACCAAGATAGAAAAGCTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTGAATCTAAAATTATCTCTGGATTTTTGGAAG--ACAGCATGTTTT-AAGCATCC--TT----TAAAAAATTTTTTT--TA--AACAAGTTGCACATGATTCTGC-TGAAATCTTACTAAATGTTTATTCTGTTTCAATCCTGGAGCCTAATATACCAGA------AGCTTTATGTCAAGTGGGTCTTCCAAGTCTGTAGGAAAATAATTGTATCTAAGAGCTGGTAGGCTGGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 382228 486 + 643850 -AATGACTTTC-----CAAGTTCAGCAAATG---TTTTTATGTTTGAGA--TTTATTTCCTT-----TTTCTC-TCTAAAGGAAAAAGTTTAGATAG---CTCTTTGCTCTTTCATTTGTTTTCTTGCTGACAAGAT---ATACTCCATATGGAGAGTTCAGATTTGTTGTGGCAACTTTTCAGTTTGGTATTTGAGATTCTAATCTTCCTCTATTTTTGCACATGAATACGTAGGTTAGCATTGGAGACCAAGATAGAATAGTTCTCAGATTCCCTTGGCAAGCCTAGA--TTTTTCAATCTAAAATTATCTCTGGATTTTTGGAAG--ACTGCATGTTTT-AAGCATCC-TTT----T---TTTTTTTCCTCTTA--AGCTAGTTGCACATGATTCCACAGAAAATATTACTAAAAGTTTATTCTGTTGAAAACCTGAAGCCTAATACACCTTG------AACTTTATATCAAGCACATCTTCCAAATTTATAGGAAAATAATTGTATCTGAGAGCTGACAGGCTGTG i dasNov3.JH563638 C 0 C 0 a score=341492.000000 s hg38.chr19_GL383574v1_alt 112232 30 + 155864 ATATCACATGGG--TTGGGTGTCCACTC---------------------------------TCtt s panTro5.chr19 36179845 30 + 61309027 ATATCACATGGG--TTGGGTGTCCACTC---------------------------------TCtt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924095 30 + 64411610 ATATCACATGGG--TTGGGTGTCCACTC---------------------------------TCtt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335787 30 - 8369475 ATATCACATGGG--TTGGGTGTCCACTC---------------------------------TCtt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934160 30 - 106955855 ATATCACATGGG--TTGGGTGTCCACTC---------------------------------TCtt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30248906 30 + 53671032 ATATCTCATGGG--TTGGGTGTCTACTC---------------------------------tttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34702815 33 + 59248254 ATATCTCATGGG--TTGGGTGTCTACTC------------------------------ttttttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4574919 35 - 13342542 ATATCTCATGGG--TTGGGTGTCTACTC----------------------------ttttttttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499386 30 + 7714307 ATATCTCATGGG--TTGGGTGTCTACTC---------------------------------tttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303393 30 + 50890351 ATATCTCATGGG--TTGGGTGTCCTCTC---------------------------------tttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 933000 30 - 2385121 ATATCTTATGGG--TTGGGTGTCTACtc---------------------------------tttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2377816 30 + 4274983 ATATCTCATGGG--TTGGGTGTCCACTC---------------------------------tttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590264 30 + 49145316 GTATCACATGGG--TTGGGTGtctcctc---------------------------------tctc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5435757 30 + 8899380 ATATCATACGGG--TTAGGTGTCCACTC---------------------------------ACTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1645732 30 - 2680843 ATATCACATGGG--TTAGGTGTCCAttc---------------------------------tctc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 392902 30 - 4471408 ATATCACATGGG--TTAGGTGTtctctc---------------------------------tctc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5515529 63 + 5549422 GTAGTATATTTG--TTGGGTATCTACTCCCTCCTTTCCCCTTCCGTGACTTTGTCCttttttttt i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111129873 32 - 145441459 ACATCCCATGGGTTTTGTGTGTCCACTC---------------------------------TGTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4646958 30 - 122678785 ATATCACATGGG--CTGGGTGTCCACTC---------------------------------TCTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 382714 27 + 643850 ATATTACCTGGG--TTGTGTGTCCATTC---------------------------------T--- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 602541 25 + 2501019 I e micMur3.chr22 3987874 25 - 30143674 I a score=25535.000000 s hg38.chr19_GL383574v1_alt 112262 6 + 155864 ttttt-----------t s panTro5.chr19 36179875 5 + 61309027 ttttt------------ i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924125 5 + 64411610 ttttt------------ i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335817 8 - 8369475 ttttt---------ttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934190 17 - 106955855 ttttttttttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30248936 6 + 53671032 ttttt-----------t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34702848 6 + 59248254 ttttt-----------t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4574954 6 - 13342542 ttttt-----------t i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499416 6 + 7714307 ttttt-----------t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303423 6 + 50890351 ttttt-----------t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 933030 6 - 2385121 ttttt-----------t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2377846 6 + 4274983 ttttt-----------t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590294 6 + 49145316 tctct-----------c i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5435787 6 + 8899380 TCTCT-----------C i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1645762 6 - 2680843 tctct-----------c i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 392932 6 - 4471408 tctct-----------c i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5515592 6 + 5549422 ttttt-----------t i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111129905 6 - 145441459 CCTTT-----------C i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 602541 25 + 2501019 I e micMur3.chr22 3987874 25 - 30143674 I e dasNov3.JH563638 382741 0 + 643850 C e canFam3.chr1 4646988 0 - 122678785 C a score=9555.000000 s hg38.chr19_GL383574v1_alt 112268 1 + 155864 t s gorGor5.CYUI01015150v1 6335825 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934207 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30248942 1 + 53671032 t i rheMac8.chr19 C 0 I 6 s macFas5.chr19 34702854 1 + 59248254 t i macFas5.chr19 C 0 I 6 s macNem1.NW_012011689v1 4574960 1 - 13342542 t i macNem1.NW_012011689v1 C 0 I 6 s cerAty1.NW_012005268v1 5499422 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 I 6 s chlSab2.chr6 29303429 1 + 50890351 t i chlSab2.chr6 C 0 I 2 s manLeu1.NW_012102454v1 933036 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 I 2724 s colAng1.NW_012111697v1 2377852 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590300 1 + 49145316 t i calJac3.chr22 C 0 I 39 s saiBol1.JH378197 5435793 1 + 8899380 t i saiBol1.JH378197 C 0 I 5 s cebCap1.NW_016107633v1 1645768 1 - 2680843 t i cebCap1.NW_016107633v1 C 0 I 5 s aotNan1.NW_018505377v1 392938 1 - 4471408 t i aotNan1.NW_018505377v1 C 0 I 23 s otoGar3.GL873654 5515598 1 + 5549422 t i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 602541 25 + 2501019 I e micMur3.chr22 3987874 25 - 30143674 I e dasNov3.JH563638 382741 0 + 643850 C e mm10.chr7 111129911 0 - 145441459 C e canFam3.chr1 4646988 0 - 122678785 C e panPan2.chr19 39924130 0 + 64411610 C e panTro5.chr19 36179880 0 + 61309027 C a score=480167.000000 s hg38.chr19_GL383574v1_alt 112269 71 + 155864 gagtcggag--tctccctctgtccccgaggctggagtgcagtggcgcaatcttggcttactgcaacctccacc s panTro5.chr19 36179880 71 + 61309027 gagtcggag--tctccctctgtccccgaggctggagtgcagtggcgcaatcttggcttactgcaacctccacc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924130 71 + 64411610 gagtcggag--tctccctctgtccccgaggctggagtgcagtggcgcaatcttggcttactgcaacctccacc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335826 71 - 8369475 gagtcagag--tctccctctgtccccgaggctggagtgcagtggcgcaatcttggcttactgcaacctccacc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934208 71 - 106955855 gaatcggag--tctccttctgtccccgaggctggagtgtggtggcacaatcttggctcactgcaatctccacc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30248949 61 + 53671032 gagttgga------------gtcccccaggctggagtgcagtggtgcaatcttggctcactgcaacctccacc i rheMac8.chr19 I 6 C 0 s macFas5.chr19 34702861 61 + 59248254 gagttgga------------gtcccccaggctggagtgcagtggtgcaatcttggctcactgcaacctccacc i macFas5.chr19 I 6 C 0 s macNem1.NW_012011689v1 4574967 61 - 13342542 gagttgga------------gtcccccaggctggagtgcagtggtgcagtcttggctcactgcaacctccacc i macNem1.NW_012011689v1 I 6 C 0 s cerAty1.NW_012005268v1 5499429 61 + 7714307 gagttgga------------gtcccccaggctggagtgcagtggtgcaatcttggctcactgcaacctccacc i cerAty1.NW_012005268v1 I 6 C 0 s chlSab2.chr6 29303432 71 + 50890351 gagttggag--tctccctctgtcccccagactggagtgcagtggtgcaatcttggctcactgcaacctccacc i chlSab2.chr6 I 2 C 0 s colAng1.NW_012111697v1 2377853 71 + 4274983 gagtcagag--tctccctctgtcccccaggctggagtgcagtggtgcaatcttggctcactgcaacctccacc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590340 70 + 49145316 gagtcagag--tctccctctgtcccccaggctggagtgcagtggc-cgatatcggctcactgcagcctctgcc i calJac3.chr22 I 39 C 0 s saiBol1.JH378197 5435799 70 + 8899380 gagtcagag--actccctctgtcccccaggctggagtgcagtggc-cgatctaggctcactgcaacctctccc i saiBol1.JH378197 I 5 C 0 s cebCap1.NW_016107633v1 1645774 70 - 2680843 gagtcagag--tctccctctgtcccccagactggagtgcagtggc-cgatcttggctcactgcaacctctgcc i cebCap1.NW_016107633v1 I 5 C 0 s aotNan1.NW_018505377v1 392962 72 - 4471408 gagtcagagtctctccctctgttccgcaggctggagtgcagtggc-cgatctcggctcactgcaacctctgcc i aotNan1.NW_018505377v1 I 23 I 8 s otoGar3.GL873654 5515599 66 + 5549422 gagacag----tttcactgtgtcactctcaatagagtgctgaggc---atcacagctcacagcaacctcataa i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 382741 4 + 643850 --------------------------------------------------------TTAC------------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 602541 25 + 2501019 I e micMur3.chr22 3987874 25 - 30143674 I e mm10.chr7 111129911 0 - 145441459 C e canFam3.chr1 4646988 0 - 122678785 C e manLeu1.NW_012102454v1 933037 2724 - 2385121 I a score=578587.000000 s hg38.chr19_GL383574v1_alt 112340 54 + 155864 tcccaggttcaagcaattcttctgcctcagcctccctaggagctgggatcacag s panTro5.chr19 36179951 54 + 61309027 tcccaggttcaagcaattcttctgcctcagcctccctaggagctgggatcacag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924201 54 + 64411610 tcccaggttcaagcaattcttctgcctcagcctccctaggagctgggatcacag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335897 54 - 8369475 tcccaggttcaagcaattcttctgcctcagcctccctaggagctgggaccacag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934279 54 - 106955855 tcccaggttcaagcagttctcctgcctcagcctccctaggagctgggatcacag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249010 54 + 53671032 tcccgggttcaagcgattctcctgcctcagcctccctcgaagctaggatcacag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34702922 54 + 59248254 tcccgggttcaagcgattctcctgcctcagcctccctcgaagctaggatcacag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575028 54 - 13342542 tcccaggttcaagccattctcctgcctcagcctccctcgaagctaggatcacag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499490 54 + 7714307 tcccgggttcaagcgattctcctgcctcagcctccctcgaagctaggatcacag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303503 54 + 50890351 tcccgggttcaagtgattctcctgcctcagcctcccttgaagctaggatcacag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 935761 54 - 2385121 tcccgggttcaagcgattctcctgcctcagcctccctcgaagctaggatcacag i manLeu1.NW_012102454v1 I 2724 C 0 s colAng1.NW_012111697v1 2377924 54 + 4274983 tcctgggttcaagcgattctcctgcctcagcctccctcggagctgggatcacag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590410 54 + 49145316 tcccgagttcaagcaattctcctgcctcagcctcccaaggagctgggatcacag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5435869 54 + 8899380 tccagagttcaagcaattctcctgcctcagcctcttaaggagctgggatcacag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1645844 54 - 2680843 tcccgagttcaagcaattctcctgcctcagcctcccaaggagctgggatcacag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393042 54 - 4471408 tcctgagttcaagcaattctcctgcctcagcctcccaaggagctgggatcacag i aotNan1.NW_018505377v1 I 8 C 0 s otoGar3.GL873654 5515665 54 + 5549422 ccttggacttaagcaattctcttgcctcggtctcccaagtagctgggacttagg i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 602541 25 + 2501019 I e micMur3.chr22 3987874 25 - 30143674 I e dasNov3.JH563638 382745 0 + 643850 C e mm10.chr7 111129911 0 - 145441459 C e canFam3.chr1 4646988 0 - 122678785 C a score=102358.000000 s hg38.chr19_GL383574v1_alt 112394 14 + 155864 ttgtga---g---ccaccac s panTro5.chr19 36180005 14 + 61309027 ttgtga---g---ccaccac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924255 17 + 64411610 ttgtga---gccaccaccac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335951 14 - 8369475 ttgtga---g---ccaccac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934333 14 - 106955855 gtgtga---g---ccaccac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249064 14 + 53671032 gtgtta---g---ccaccac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34702976 14 + 59248254 gtgtta---g---ccaccac i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575082 14 - 13342542 gtgtaa---g---ccaccac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499544 14 + 7714307 gtgtaa---g---ccaccac i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303557 14 + 50890351 gcgtaa---g---caaccac i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 935815 14 - 2385121 gtgtaa---g---ccaccac i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2377978 14 + 4274983 gtgtga---g---ccaccac i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590464 14 + 49145316 gtgtga---a---ccatcgt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5435923 14 + 8899380 gtgtga---a---ccaccat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1645898 17 - 2680843 gtgtgaacca---ccaccat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393096 14 - 4471408 gtgtga---a---ccaccat i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5515719 11 + 5549422 gtg------c---ccaccac i otoGar3.GL873654 C 0 I 58 s mm10.chr7 111129911 7 - 145441459 CTGTGA---G---------- i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 602541 25 + 2501019 I e micMur3.chr22 3987874 25 - 30143674 I e dasNov3.JH563638 382745 0 + 643850 C e canFam3.chr1 4646988 0 - 122678785 C a score=148704.000000 s hg38.chr19_GL383574v1_alt 112408 16 + 155864 ccctggctaatCACTC s panTro5.chr19 36180019 16 + 61309027 ccctggctaatCACTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924272 16 + 64411610 ccctggctaatCACTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335965 16 - 8369475 acctggctaatCACTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934347 16 - 106955855 acctggctaatCACTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249078 16 + 53671032 gcccagccaatCACTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34702990 16 + 59248254 gcccagccaatCACTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575096 16 - 13342542 gcccagccaatCACTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499558 16 + 7714307 gcccagccaatCACTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303571 16 + 50890351 gcctagccaatCACTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 935829 16 - 2385121 gcccagccaatCACTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2377992 16 + 4274983 gcccagccaatCACTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590478 16 + 49145316 gcccagctaatCACTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5435937 16 + 8899380 gcccagctaatCACTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1645915 16 - 2680843 gcccagccaatCACTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393110 16 - 4471408 gcccagctaatCACTT i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 602541 25 + 2501019 I e micMur3.chr22 3987874 25 - 30143674 I e dasNov3.JH563638 382745 0 + 643850 C e otoGar3.GL873654 5515730 58 + 5549422 I e mm10.chr7 111129918 0 - 145441459 C e canFam3.chr1 4646988 0 - 122678785 C a score=107242.000000 s hg38.chr19_GL383574v1_alt 112424 9 + 155864 T----TTTTTCCT- s panTro5.chr19 36180035 13 + 61309027 TCTCTTTTTTCCT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924288 13 + 64411610 TCTCTTTTTTCCT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335981 12 - 8369475 TCTC-TTTTTCCT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934363 13 - 106955855 TCTCTTTTTTCCT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249094 13 + 53671032 TCTCTTTTTTCCT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703006 13 + 59248254 TCTCTTTTTTCCT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575112 13 - 13342542 TCTCTTTTTTCCT- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499574 13 + 7714307 TCTCTTTTTTCCT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303587 13 + 50890351 TCTCTTTTTTCCT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 935845 13 - 2385121 TCTCTTTTTTCCT- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378008 13 + 4274983 TCTCTTTTTTCCT- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590494 9 + 49145316 T----TTTTTCCT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5435953 9 + 8899380 T----TTTTTCCT- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1645931 7 - 2680843 ------TTTTCCT- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393126 9 - 4471408 T----TTTCTCCT- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3987899 12 - 30143674 -CTCCTTTTCCCT- i micMur3.chr22 I 25 C 0 s proCoq1.NW_012149263v1 602566 12 + 2501019 -CTCCTTTTCCCT- i proCoq1.NW_012149263v1 I 25 C 0 s canFam3.chr1 4646988 9 - 122678785 ----TCTTTCCCT- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 382745 8 + 643850 ------TTTTCCTT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5515730 58 + 5549422 I e mm10.chr7 111129918 0 - 145441459 C a score=636804.000000 s hg38.chr19_GL383574v1_alt 112433 40 + 155864 CCTGTAACTTTGTCCTTAGTGAAAAATGATGATCTTCCTA s panTro5.chr19 36180048 40 + 61309027 CCTGTAACTTTGTCCTTAGTGAAAAATGATGATCTTCCTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924301 40 + 64411610 CCTGTAACTTTGTCCTTAGTGAAAAATGATGACCTTCCTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6335993 40 - 8369475 CCTGTAACTTTGTCCTTAGTGAAAAATGATGATCTTCCTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934376 40 - 106955855 CCTGTAACTTTGTCCTCGGTGAAAAATGATGATCTTCCTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249107 40 + 53671032 CCTGTGACTTTGTCCTTAGTGAAAAATGATGATCTTCCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703019 40 + 59248254 CCTGTGACTTTGTCCTTAGTGAAAAATGATGATCTTCCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575125 40 - 13342542 CCTGTGACTTTGTCCTTAGTGAAAAATGATGATCTTCCTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499587 40 + 7714307 TCTGTGACTTTGTCCTTAGTGAAAAATGATGATCTTCCTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303600 40 + 50890351 CCTGTGACTTTGTCCATAGTGAAAAATGATGATCTTCCTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 935858 40 - 2385121 CCTGTGACTTTGTCCTTAGTGAAAAATGATGATCTTCCTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378021 40 + 4274983 CTTGTGACTTTGTCCTTAGTGAAAAATGATGATCTTCCTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590503 40 + 49145316 CCTGTGACTTTGACCTTAGTGAAAAATTATGATCTTCCTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5435962 40 + 8899380 CCTGTGACTTTGTCCTTAGTGAAAACTGATGATATTCCTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1645938 40 - 2680843 CCTGTGACTTTGTCCTTAGTGAAAAATGATGATCTTCCTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393135 40 - 4471408 CCTGTGACTTTGTCCTTAGTGAAAAGTGATGATCTTCCTA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3987911 40 - 30143674 CCAGTGACTTTGTCCTTAGTGAAAAATGACAACTTTCTTA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 602578 40 + 2501019 CCCGTGACTTTGTCCTTAGTGAAAAATGACGACCTTCCTA i proCoq1.NW_012149263v1 C 0 I 256 s otoGar3.GL873654 5515788 38 + 5549422 ccggcagcttcggtgtatgtggctggtgctgagctata-- i otoGar3.GL873654 I 58 C 0 s mm10.chr7 111129918 34 - 145441459 ------ACTTTCTCCTCAGTGGAAAAAAATGACCTTCCTA i mm10.chr7 C 0 C 0 s canFam3.chr1 4646997 40 - 122678785 CTTGAAACTTTGTCCTTAGTGGAAAATGATGACCTTCCTA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 382753 33 + 643850 CCTGTGACTTTGTC-------GAAAATGATGACCTTCCCA i dasNov3.JH563638 C 0 C 0 a score=1480220.000000 s hg38.chr19_GL383574v1_alt 112473 103 + 155864 GGTA----------------------------GGCAAAAAAATGTTGGTTTAGATAAGGAATTGATTTGTTTTGGAGTTATTG------------AAAA-GCAGGTTGCCGTTTTCTCTGAAGTGTAAGTTCACAGAGAGCCTG s panTro5.chr19 36180088 103 + 61309027 GGTA----------------------------GGCAAAAAAATGTTGGTTTAGATAAGGAATTGATTTGTTTTGGAGTTATTG------------AAAA-GCAGGTTGCCGTTTTCTCTGAAGTGTAAGTTCATAGAGAGCCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924341 103 + 64411610 GGTA----------------------------GGCAAAAAAATGTTGGTTTAGATAAGGAATTGATTTGTTTTGGAGTTATTG------------AAAA-GCAGGTTGCCGTTTTCTCTGAAGTGTAAGTTCATAGAGAGCCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336033 102 - 8369475 GGTA----------------------------GGCAAAAAAATGTTGGTTTAGATAAGGAATTGATTTGTTTTGGAGTTATTG------------AAAA-GCAGGTTGCCGTTTTCTCTGAAGTGT-AGTTCACAGAGAGCCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934416 103 - 106955855 GGTA----------------------------GGCAAAAAAATGTTGGTTTAGATAAGGAATTGATTTGTTTTGGAGTTATCG------------AAAA-GCAGGTTGCCGTTTTCTCTGAAGTGTAAGTTCACAGAGAGCCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249147 103 + 53671032 GGTA----------------------------GGCAAAAAAATGTTGATTTAGATAAGGAATTGATTTGTTTTGGAGTTATTG------------AAAA-GCAGGTTGCCGTTTTCTCTGAAGTGTAAGTTCACAGAGAGCCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703059 103 + 59248254 GGTA----------------------------GGCAAAAAAATGTTGATTTAGATAAGGAATTGATTTGTTTTGGAGTTATTG------------AAAA-GCAGGTTGCCGTTTTCTCTGAAGTGTAAGTTCACAGAGAGCCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575165 103 - 13342542 GGTA----------------------------GGCAAAAAAATGTTGATTTAGATAAGGAATTGATTTGTTTTGGAATTATTG------------AAAA-ACAGGTTGCCGTTTTCTCTGAAGTGTAAGTTCACAGAGAGCCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499627 103 + 7714307 GGTA----------------------------GGCAAAAAAATGTTGATTTAGATAAGGAATTGATTTGTTTTGGAGTTATTG------------AAAA-GCAGGTTGCCGTTTTCTCTGAAGTGTAAGTTCACAGAGAGCCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303640 103 + 50890351 GGTA----------------------------GGCAAAAAAATGTTGATTTAGATAAGGAATTGATTTGTTTTGGAGTTACTG------------AAAA-GCAGGTTGCCGTTTTCTCTGAAGTGTAAGTTCACAGAGAGCCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 935898 103 - 2385121 GGTA----------------------------GGCAAAAAAATGTTGATTTAGATAAGGAATTGATTTGTTTTGGAGTTATTG------------AAAA-GCAGGTTGCCGTTTTCTCTGAAGTGTAAGTTCACAGAGAGCCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378061 103 + 4274983 GGTA----------------------------GGCAAAAAAATGTTGATTTAGATAAGGAATTGATTTGTTTTGGAGTTATTG------------AAAA-GCAGGTTGCTGTTTTCTCTGAAGTGTAAGTTCACAGAAAGCCTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590543 103 + 49145316 GGTA----------------------------GGCAAAAACATTTTGGTTTAGATTAGAAATTGATTTGTTTTGGAGTTATTG------------AAAA-GCTAGTTGCTGTTTTCTCTTAAGTGTAAGTTCACAGAGAGCCTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5436002 103 + 8899380 GGTA----------------------------GGCAAAAACATGTTGGTTTAGATAAGAAATTGATTTGTTTTGGAGTTACTG------------AAAA-GCTGGTTGCTGTTTTCTCTTAAATGTAAGTTCACAGAGAGCCTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1645978 103 - 2680843 GGTA----------------------------GGCAAAAACATGTTGGTTTAGATAAGAAATTGATTTGTTTTGGAGTTATTG------------AAAA-GCTGGTTGCTGTTTTCTCTTAAGTGTAAGTTCACAGAGAGCCTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393175 103 - 4471408 GGTA----------------------------GGCAAAAACATGTTGGTTTCGGTAAGAAATTGATGTGTTTTGGAGTTATTG------------AAAA-GCCAGTTGCTGTTTTCTCTTAAGTGTAAGTTCACAGAGAGGCTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3987951 99 - 30143674 --CA----------------------------TGGACAAGAATGTTGGTTTGAATAAGGAATTGATTTGTTTTGGAGCTATTG------------AAAC--CAGGTTGCCATGTTCTCTT-AGTATAAGTTCACAGAGAACCTG i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5515826 129 + 5549422 ggcaggcgctgagccTGTGACTTTGTCCTTACTGAGCAAGAATGTTGGTTTGGATAAAGAATTGATTTGTTTTGAAATTGTTG------------AAAA--CTGGTTGCCATTTTCTCTT-AGTATAAGTTCACAGAGAGCCTA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111129952 98 - 145441459 GATG----------------------------GACA-AAGAATGTTGGTTAGAATAAGGAATTGCTTTG-TTTGGAGTAA--G------------AAGA-ACCCATTGCTGGGTTCTCTC-AGTATTAATTCAGAAAGAACCTG i mm10.chr7 C 0 C 0 s canFam3.chr1 4647037 112 - 122678785 GGTA----------------------------GGCA-AAGAATGTTGGTTTGAATAAGGAATTGCTTTACTTTGGAATTACAGGAAAAAAAAAAAAAAA-AAAAGATGCT-TTTTCTCTT-AGTACAAGTTCACGGAGAGCTTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 382786 102 + 643850 GGT-----------------------------GGAGAAAGAATATTGGTTTAAAAAACGAATTGATTTATCTTAGAGTTACAG------------AAAAAGCTGGATGCCATTTTCTCTT-AGCGTAAGTTCACAGAGAGCCTG i dasNov3.JH563638 C 0 I 38 e proCoq1.NW_012149263v1 602618 256 + 2501019 I a score=37165.000000 s hg38.chr19_GL383574v1_alt 112576 5 + 155864 AATGT s panTro5.chr19 36180191 5 + 61309027 AATGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924444 5 + 64411610 AATGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336135 5 - 8369475 AATGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934519 5 - 106955855 AATGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249250 5 + 53671032 AATGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703162 5 + 59248254 AATGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575268 5 - 13342542 AATGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499730 5 + 7714307 AATGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303743 5 + 50890351 AATGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936001 5 - 2385121 AATGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378164 5 + 4274983 AATGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590646 5 + 49145316 AATGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5436105 5 + 8899380 AATGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1646081 5 - 2680843 AATCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393278 5 - 4471408 AATGT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3988050 5 - 30143674 AGTGT i micMur3.chr22 C 0 I 35 s otoGar3.GL873654 5515955 1 + 5549422 A---- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111130050 2 - 145441459 AA--- i mm10.chr7 C 0 C 0 s canFam3.chr1 4647149 4 - 122678785 AACT- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 602618 256 + 2501019 I e dasNov3.JH563638 382888 38 + 643850 I a score=256655.000000 s hg38.chr19_GL383574v1_alt 112581 37 + 155864 TGTGTTTGGATTAAGGAAAAACAGCAAC--AGGTTGTGC---- s panTro5.chr19 36180196 37 + 61309027 TGTGTTTGGATTAAGGAAAAACAGCAAC--AGGTTGTGC---- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924449 37 + 64411610 TGTGTTTGGATTAAGGAAAAACAGCAAC--AGGTTGTGC---- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336140 37 - 8369475 TGTGTTTGGATTAAGGAAAAACAGCAAC--AGGTTGTGC---- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934524 37 - 106955855 TGTGTTTGGATTAAGGAAAAACAGCAAC--AGGTTGTGC---- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249255 36 + 53671032 TGTGTTTGGA-TAAGGAAAAACAGCAAC--AGGTTGTGC---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703167 36 + 59248254 TGTGTTTGGA-TAAGGAAAAACAGCAAC--AGGTTGTGC---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575273 36 - 13342542 TGTGTTTGGA-TAAGGAAAAACAGCAAC--AGGTTGTGC---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499735 36 + 7714307 TGTGTTTGGA-TAAGGAAAAACAGCAAC--AGGTTGTGT---- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303748 36 + 50890351 TGTGTTTGGA-TAAGGAAAAACAGCAAC--AGGTTGTGC---- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936006 36 - 2385121 TGTGTTTGGA-TAAGGAAAAACAGCAAC--AGGTTGTGC---- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378169 36 + 4274983 TGTGTTTGGA-TAAGGAAAAACAGCAAC--AGGTTGTGC---- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590651 36 + 49145316 --TGTTTGGA-TAAGGAAGAATAACAACAGAGGTTGTGC---- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5436110 36 + 8899380 --TGTTTGGA-TAAGGAAAAACAACAACAGAGGTTGTGC---- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1646086 36 - 2680843 --TGTTTGGC-TAAGGAAAAACAGCAACAGAGGTTGTGC---- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393283 36 - 4471408 --TGTTTGGA-TAAGGAAAAACAACAACAGAGGTTGTGC---- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5515956 5 + 5549422 ----------------------------------TGTGT---- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111130052 8 - 145441459 -------------------------------GTGTAGAG---- i mm10.chr7 C 0 C 0 s canFam3.chr1 4647153 9 - 122678785 ----------------------------------TGTGAAGCG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 602618 256 + 2501019 I e micMur3.chr22 3988055 35 - 30143674 I e dasNov3.JH563638 382888 38 + 643850 I a score=462490.000000 s hg38.chr19_GL383574v1_alt 112618 37 + 155864 TTGTGCTTC---AAATGTCTT-TAACTCTACTGAAACTGCC s panTro5.chr19 36180233 37 + 61309027 TTGTGCTTC---AAATGTCTT-TAactctactgaaactgcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924486 31 + 64411610 TTGTGCTTC---AAATGTCTT-------TACTGAAACTGCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336177 37 - 8369475 TTGTGCTTC---AGATGTCTT-TAactctactgaaactgcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934561 37 - 106955855 TTGTGCTTC---AGATGTCTT-TAactctactgaaactgcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249291 37 + 53671032 TTGTGCTTG---AAATGTCTT-TAACTCTACTGAAACTGCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703203 37 + 59248254 TTGTGCTTG---AAATGTCTT-TAACTCTACTGAAACTGCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575309 37 - 13342542 TTGTGCTTG---AAATGTCTT-TAactctactgaaactgcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499771 37 + 7714307 TTGTGCTTG---AAATGTCTT-TAactctactgaaactgcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303784 37 + 50890351 CTGTGCTTG---AAGTGTCTT-TAACTCTACTGAAACTGCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936042 37 - 2385121 TTGTGCTTG---AAATGTCTT-TAACTCTACTGAAACTGCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378205 37 + 4274983 TTGTGCTTG---AAATGTCTT-TAACTCTACTGAAACTGCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590687 37 + 49145316 TTGTGCTTC---AAATGTCTT-TATCTCTACTGAAACTGCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5436146 37 + 8899380 TTGTGCTTC---ACAAGTCTT-TATCTCTACTGAAACTGCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1646122 37 - 2680843 TTGTGCTTC---AAATGTCTT-TATCTCTACTGAAACTGCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393319 37 - 4471408 TTGTGCTTC---AGATGGCTT-TATCTCTACTGAAACTGCC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5515961 41 + 5549422 CAGGGATTGTATAGATGTCTTTTATCTCTACTGAAACTGTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111130060 34 - 145441459 TTGTGCTCT---AAACGTTTT----CTCTACAGATATTGTT i mm10.chr7 C 0 C 0 s canFam3.chr1 4647162 35 - 122678785 TTGTGCTTC---AAATGTCTT-TATCTCTAATGAAACTG-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 382926 35 + 643850 TAGTCCCTC---AAATGTTTC-TG--TCTACTGAAACTATC i dasNov3.JH563638 I 38 C 0 e proCoq1.NW_012149263v1 602618 256 + 2501019 I e micMur3.chr22 3988055 35 - 30143674 I a score=622154.000000 s hg38.chr19_GL383574v1_alt 112655 41 + 155864 CTC-----TTGAGGGTCCCCTAACTGATGCATGCAGTGGCCATTGC s panTro5.chr19 36180270 41 + 61309027 ctc-----ttgagggtcccctaactgatgcatgcagtggccattgc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924517 41 + 64411610 CTC-----TTGAGGGTCCCCTAACTGATGCATGCAGTGGCCATTGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336214 41 - 8369475 ctc-----ttgagggtcccctaactgatgcatgcagtggccattgc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934598 41 - 106955855 ctc-----ttgagggtcccctaattgatgcatgcagtggccattgc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249328 41 + 53671032 CTC-----TTGAGGGTCCCCTAATTGATACATGCAGTGGCCATTGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703240 41 + 59248254 CTC-----TTGAGGGTCCCCTAATTGATACATGCAGTGGCCATTGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575346 41 - 13342542 ctc-----ttgagggtcccctaattgatgcatgcagtggccattgc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499808 41 + 7714307 ctc-----ttgagggtcccctaattgatgcatgcagtggccattga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303821 41 + 50890351 CTC-----TTGAGGGTCCCCTAATTGATGCATGCAGTGGCCATTGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936079 41 - 2385121 CCC-----TTGAGGGTCCCCTAATTGATGCATGCAGTGGCCATTGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378242 41 + 4274983 CTC-----TTGAGGGTCCCCTAATTGATGCATGCAGTGGCCATTGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590724 41 + 49145316 CTC-----TTGGGGATCCCCTAATTGATGCATGCAGCAGCCATTGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5436183 41 + 8899380 CTC-----TTGGGGATCCCCTAATTGATGCATGCAGCAGCCATTGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1646159 41 - 2680843 CTC-----TTGGGGATCCCCTAATTGATGCATGCAGCAGCCATTGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393356 41 - 4471408 CTC-----TTGGGGATCCCCTAATTGATGCATGCAGCAGAAATTGC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3988090 41 - 30143674 CTC-----TTGAGGGTCGCCTAATTGATAGATGCAGTGGCCATTGC i micMur3.chr22 I 35 I 256 s otoGar3.GL873654 5516002 41 + 5549422 CTC-----TTGAGAATCCTCTAGCTGATAAATGCAGTAGCCATTGC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111130094 39 - 145441459 --C-----AGTGAGGCCCCCGAGTTGGTTGATCTAGTGGTCACTGC i mm10.chr7 C 0 C 0 s canFam3.chr1 4647197 37 - 122678785 CTC-----TTGAGG----CCCAATTGATAGATGCAGTGGCTGCTGC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 382961 46 + 643850 CTCTTGAGTTGAGGGTTCTCTAATTGGTGGATGCAGTGGCCGTTGC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 602618 256 + 2501019 I a score=780526.000000 s hg38.chr19_GL383574v1_alt 112696 63 + 155864 TTAATTATTTTCCTTGACTTTGATCTCAGGTATTTGGCATGGTGAGCTATTCTTTCTTGCTCT s panTro5.chr19 36180311 63 + 61309027 ttaattattttccttgactttgatctcaggtatttgacatggtgagctattctttcttgctct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924558 63 + 64411610 TTAATTATTTTCCTTGACTTTGATCTCAGGTATTTGGCATGGTGAGCTATTCTTTCTTGCTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336255 63 - 8369475 ttaattattttccttgactttgatctcaggtatttggcatggtgagctattctttcttgctct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934639 63 - 106955855 ttaattattttccttgactttgatctcaggtatttggcatggtgagctattctttcttgctCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249369 63 + 53671032 TTAATCATTTTCCTTGACTTTGATCTCAGGTATTTGGCATGGTGAGCTATTCTTTCTTCCTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703281 63 + 59248254 TTAATCATTTTCCTTGACTTTGATCTCAGGTATTTGGCATGGTGAGCTATTCTTTCTTCCTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575387 63 - 13342542 ttaatcattttccttgactttgatctcaggtatttggcatggtgagctattctttcttcctCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499849 63 + 7714307 tgagtcattttccttgactttgatctcaggtatttggcatggtgagctattctttcttcctCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303862 63 + 50890351 TTAATCATTTTCCTTGACTTTGATCTCAGGTATTTGGCATGGTGAGCTATTCTTTCTTCCTCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936120 63 - 2385121 TTAATCATTTTCCTTGACTTTGATCTCAGGTATTTGGCATGGTGAGCTATTCTTTCTTCCTCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378283 63 + 4274983 TTAATCATTTTCCTTGACTTTGATCTCAGGTATTTGGCATGGTGAGCTATTCTTTCTTCCTCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590765 63 + 49145316 TTAATTATTTTCCTTGACTTCGATTGCAGGTATTTGGCATAGTGAGCTATTCTTTCTTGCTCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5436224 63 + 8899380 TTAATCATTTTCCTTGACTTTGATGGCAGGTATTTGGCATAGTGAGCTGTTGTTTCTTGCTCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1646200 63 - 2680843 TTAATCATTTTCCTTGACTGTGATGGCAGGTATTTGGCATAATGAGCTGTTCTTTCTTGCTCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393397 63 - 4471408 CTAATCATTTTCCTTGACTTTGATCGCAGGTATTTGGCATAGTGAGCTGTTCTTTCTTGCTCT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5516043 58 + 5549422 --AA--ATTTCCCTTGACTTTGACTGTAAATACTTTGTATGATGAGGTATTATTTCGTACT-T i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111130133 48 - 145441459 ----TTGCTTTTTTCTGTTTTCTTTTC----ACTTTGTGTAG-------TTGTTTTTCCTCTT i mm10.chr7 C 0 C 0 s canFam3.chr1 4647234 63 - 122678785 TTACTCATTTCCCTTGACCTTGACCATAAATATTTGGCATGGTGAGCCAGATTTCCTTGCTGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 383007 63 + 643850 TTATTCATTTCCCTTGATCTTGGCCATAAACATTTGTCATGATTAGCCATTCTTTCTTTTTTT i dasNov3.JH563638 C 0 I 424 e proCoq1.NW_012149263v1 602618 256 + 2501019 I e micMur3.chr22 3988131 256 - 30143674 I a score=141004.000000 s hg38.chr19_GL383574v1_alt 112759 12 + 155864 CGTGAATCT-----------CCC s panTro5.chr19 36180374 12 + 61309027 cgtgaatct-----------ccc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924621 12 + 64411610 CGTGAATCT-----------CCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336318 12 - 8369475 cgtgaatct-----------ccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934702 12 - 106955855 CGTGAATCT-----------CCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249432 12 + 53671032 CGTGAATCT-----------CCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703344 12 + 59248254 CGTGAATCT-----------CCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575450 12 - 13342542 CGTGAATCT-----------CCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499912 12 + 7714307 CGTGAATCT-----------CCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303925 12 + 50890351 CGTGAATCT-----------CCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936183 12 - 2385121 CGTGAATCT-----------CCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378346 12 + 4274983 CGTGAATCT-----------CCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590828 12 + 49145316 TGTGAATCT-----------CCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5436287 12 + 8899380 TGTGAATCT-----------CCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1646263 12 - 2680843 TGTGAATCT-----------CTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393460 12 - 4471408 TGTGAATCT-----------CCC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5516101 10 + 5549422 TATGAATCT-----------C-- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111130181 23 - 145441459 TGTCATTCTTTATGATACAACTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4647297 12 - 122678785 TGTCAATCT-----------CCT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 602618 256 + 2501019 I e micMur3.chr22 3988131 256 - 30143674 I e dasNov3.JH563638 383070 424 + 643850 I a score=138069.000000 s hg38.chr19_GL383574v1_alt 112771 15 + 155864 ATTGATTGGCCTTCT s panTro5.chr19 36180386 15 + 61309027 attgattggccttct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924633 15 + 64411610 ATTGATTGGCCTTCt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336330 15 - 8369475 attgattggccttct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934714 15 - 106955855 ATTGATTGGCCTTCt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249444 15 + 53671032 ATTGATTGGCCTGCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703356 15 + 59248254 ATTGATTGGCCTGCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575462 15 - 13342542 ATTGATTGGCCTGCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499924 15 + 7714307 ATTGATTGGCCTGCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303937 15 + 50890351 ATTGATTGGCCTGAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936195 15 - 2385121 ATTGATTGGCCTGCt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378358 15 + 4274983 ATTGATTGGCCTGCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590840 15 + 49145316 ATGGATTGGCCttct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5436299 15 + 8899380 ATGGATTGGCCttct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1646275 15 - 2680843 ATGCATTGGCCTTCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393472 15 - 4471408 ATGGATTGGCCttct i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5516111 12 + 5549422 ---AGTTTGCCTTCT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111130204 9 - 145441459 AAGACTTTG------ i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 602618 256 + 2501019 I e micMur3.chr22 3988131 256 - 30143674 I e dasNov3.JH563638 383070 424 + 643850 I e canFam3.chr1 4647309 0 - 122678785 C a score=89253.000000 s hg38.chr19_GL383574v1_alt 112786 32 + 155864 TTTTTCtttttctt--------tttttt-----cttttttttttt s panTro5.chr19 36180401 27 + 61309027 tttttctttttctt--------ttttct----------ttttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924648 32 + 64411610 tttttctttttctt--------ttcttt-----tttttttttttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336345 21 - 8369475 tttttctttttctt------------------------ttttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934729 40 - 106955855 tttttcttttttttctttcttttttttt-----tttttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249459 32 + 53671032 TTTTTCtttttctt--------tctttc-----tttttttttttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703371 32 + 59248254 TTTTTCtttttctt--------tctttc-----tttttttttttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575477 33 - 13342542 TTTTTCtttttctt--------tctttc----ttttttttttttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499939 37 + 7714307 TTTTTCTTTTTCTT--------TCTTTTCtctttttttttttttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303952 33 + 50890351 TTTTTCtttttctt--------tctttc----tttcttttttttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936210 15 - 2385121 tt------------------------------tttcttttttttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378373 34 + 4274983 TTTTTCTttttctt--------tccttt---tttttttttttttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590855 20 + 49145316 tcc------ttttt-------------------tttttttttttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5436314 8 + 8899380 tcc-------------------------------------ttttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1646290 26 - 2680843 TCCttttttttttt-------------------tttttttttttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393487 14 - 4471408 tcc-------------------------------ttttttttttt i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111130213 32 - 145441459 AGATTCTATTTATT--------TTTGtt-----tttttgtttttt i mm10.chr7 C 0 I 871 e proCoq1.NW_012149263v1 602618 256 + 2501019 I e micMur3.chr22 3988131 256 - 30143674 I e dasNov3.JH563638 383070 424 + 643850 I e otoGar3.GL873654 5516123 0 + 5549422 C e canFam3.chr1 4647309 0 - 122678785 C a score=785323.000000 s hg38.chr19_GL383574v1_alt 112818 88 + 155864 tttgagacag--------------agtcttgctc-tgttgcccagactggagtgcagtggctcggtctcagctcactgcaacctctggctccag-ggttcaaac s panTro5.chr19 36180428 88 + 61309027 tttgagacag--------------agtcttgctc-tgttgcccaggctggaatgcagtggctcgatctcagctcactgcaacctctggctccag-ggttcaaac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924680 88 + 64411610 gtagtactag--------------agtcttgctc-tgttgcccaggctggaatgcagtggctcgatctcagctcactgcaacctctggctccag-ggttcaaac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336366 88 - 8369475 tttgagacag--------------agtcttgctc-tgttgcccaggctggagtgcagtggctcgatctcagctcactgcaacctctggctccag-ggttcaaac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934769 88 - 106955855 tttgagacag--------------agtctttctc-tgttgcccaggctggagtgcagtggctcgatctcagctcactgcaacctctggctccag-ggttcaaac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249491 103 + 53671032 tttgagacagagtcttgctctgttagtcttgctc-tgttgcccaggctggagtgcagtggcgtgatctcagctcactgcagcctctggcttcagtggctcaagc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703403 103 + 59248254 tttgagacagagtcttgctctgttagtcttgctc-tgttgcccaggctggagtgcagtggcgtgatctcagctcactgcagcctctggcttcagtggctcaagc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575510 103 - 13342542 tttgagacagagtcttgctctgttagtcttgctc-tgttgcccaggctagagtgcagtggcgtgatctcagctcactgcagcctctggcttcagtggctcaagc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5499976 89 + 7714307 tttgagacag--------------agtcttgctc-tgtTgcccaggctggagtgcagtggcgtgatctcagctcgctgcagcctctggcttcagtggctcaagc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29303985 89 + 50890351 ttggagacag--------------agtcttgctc-tgttgcccaggctggagtgcagtggtgtgatctcagctcactgcagcttctggcttcagtggctcaagc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936225 89 - 2385121 tttgagacag--------------agtcttgctc-tgttgcccaggctggagtgcagtggcgtgatctcagctcactgcagcctctggcttcagtggctcaagc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378407 89 + 4274983 tttgagacag--------------agtcttgctc-tgttgcccaggctggagtgcagtggcacgatctcagctcactgcaacctctggcttcaggggctcaagc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590875 88 + 49145316 ttaaatacag--------------agtcttgctc-tgttgcccaggttggagtgcagtggcagtatcttggctcactgcaacctctggcttcag-ggttcaagc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5436322 89 + 8899380 ttggagatgg--------------agtttcgctcttgttacccaggctggagtgcaatggcacgatcttggctcaccgcaacctccgcctcctg-ggttcaggc i saiBol1.JH378197 C 0 M 2501 s cebCap1.NW_016107633v1 1646316 88 - 2680843 ttatacaaag--------------agtcttgctt-tgttgcccaggctggagtgcaatagcactatctcggcttactgcaacctctggcttcag-ggttcaagc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393501 88 - 4471408 tttgatacag--------------agtcttgctc-tgttgcccaggctggagtgcagtggcaccatcttggctcactgcaacctctggcttcag-ggttcaagc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 602618 256 + 2501019 I e micMur3.chr22 3988131 256 - 30143674 I e dasNov3.JH563638 383070 424 + 643850 I e otoGar3.GL873654 5516123 0 + 5549422 C e mm10.chr7 111130245 871 - 145441459 I e canFam3.chr1 4647309 0 - 122678785 C a score=1541093.000000 s hg38.chr19_GL383574v1_alt 112906 171 + 155864 gagtctcctgcctcagcctcccgagtagctgggattacaggtctgcgccaccacccccagcaaatttttgtatttttaatagagat-ggggtttcaccatgttggccaggctggtcttgaactcctgacctcaaa-------------------------agtgctgggattacaggcgtgagacaccacgcttggc s panTro5.chr19 36180516 196 + 61309027 aagtctcctgcctcagcctcccgagtagctgggattacaggtctgtgccaccacccccagctaatttttgtatttttaatagagat-ggggtttcaccatgttggccaggctggtcttgaactcctgacctcaaatgatccacccacctcggcctcccaaagtgctgggattacaggcgtgagacaccacgcccggc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924768 196 + 64411610 gagtctcctgcctcagcctcccgagtagctgggattacaggtctgcgccaccacccccagctaatttttgtatttttaatggagat-ggggtttcaccatgttggccaggctggtcttgaactcctgacctcaaatgatccacccacctcggcctcccaaagtgctgggattacaggcgtgagacaccacgcccggc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336454 196 - 8369475 gagtctcctgcctcagcctcccgagtagctgggattacaggtctgcgccaccacccccagctaatttttgtacttttaatagagat-ggggtttcaccgtgttggccaggctggtcttgaactcctgacctcaaatgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagacaccacgcccagc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63934857 196 - 106955855 gagtctcctgcctcagcctcccgagtagctgggattacaggtctgtgccaccacccccagctagtttttgtatttttaatagagat-ggggtttcaccatgttgtccaggctggtcttgaactcctgacctcaagtgatccacccatctcggcctcccaaactgctgggattacaggcgtgagacaccacgcccggc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249594 196 + 53671032 gattctcctgcctcagcctcccgactagctgggattacaggtctgtgtcaccacccccagctaatttttgtatttttagtagagat-aggatttcaccatgttggccaggctggtcttgaactcctgacctcaaatgatccacccttctcggcctcctagagtgctgggattacaggcgtgagacagcatgcccagc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703506 196 + 59248254 gattctcctgcctcagcctcccgactagctgggattacaggtctgtgtcaccacccccagctaatttttgtatttttagtagagat-aggatttcaccatgttggccaggctggtcttgaactcctgacctcaaatgatccacccttctcggcctcctagagtgctgggattacaggcgtgagacagcatgcccagc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575613 196 - 13342542 gattctcctgcctcagcctcccgactagctgggattacaggtctgtgtcaccacccccagctaatttttgtatttttagtagagat-aggatttcaccatgttggccaggctggtcttgaactcctgacctcaaatgatccacccttctcggcctcctagagtgctgggattacaggcgtgagacagcatgcccagc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500065 196 + 7714307 gattctcctgcctcagcctcccgactagctgggattacaggtctgtgtcaccacccccagctaatttttgtgtttttagtagagat-aggatttcaccatattggccaggctggtcttgaactcctgacctcaaatgatccacccttctcggcctcctagagtgctgggattacaggcgtgagacagcatgcccagc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304074 196 + 50890351 gactctcctgcctcagcctcctgactagctgggattacaggtctgtgtcaccacccccagctaatttttgtatttttagtagagat-aggatttcaccatgttggccaggatggtcttgaactcctgacctcaaatgatccacccttctcggcctcccagagtgctgggattacaggcgtgagacagcacgcccagc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936314 196 - 2385121 gattctcctgcctcagcctcccgactagctgggattacaggtctgtgtcaccacccccagctaatttttgtgtttttagtagagat-aggatttcaccatgttggccaggctggtcttgaactcctgacctcaaatgatccacccttctcggcctcctagagtgctgggattacaggcgtgagacagcatgcccagc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378496 196 + 4274983 gattctcttgtctcagcctcccaactagctgggattacaggtctgtgtcaccacccccaactaatttttgtatttttagtagagat-agggtttcaccatgttggccaggctggtcttgaactcctgacctcaaatgatccacccttctcggcctcccagagtactgggattacaggcgtgagacagcacacccagc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28590963 181 + 49145316 aattctcctgccggagcttcccgagtagctgagattacaggtctgtgccaccaagtctgactagtatttgtatttttagtagagactggggtctcaccatgttggccagactgatctcaaacttctgacctcaaatgatccatccacctcat----------------gattacaggtgtgagacatcacgcctggc i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1646404 181 - 2680843 aattctcctgcctgagcttcccaagtagctgggattacaggtctgtgccaccaagcctggctaatatttgtatttttagtagagacgggggtctcaccatgttggccagactggtctcaatctgctgacttcaaatgatccatccatctcat----------------gattacaggtgtgagacaccacgcctggc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393589 181 - 4471408 aattctcctgcctgagcttccctagtagctgggattacaggtctgtgccaccaagtctggctaatatttgtatttttagtagagacgggggtctcaccatattggtcagactggtctcaaactcctgacctcaaatgatccatccacctcat----------------gattacaggtgtgagacaccatgcctggc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 602618 256 + 2501019 I e micMur3.chr22 3988131 256 - 30143674 I e dasNov3.JH563638 383070 424 + 643850 I e otoGar3.GL873654 5516123 0 + 5549422 C e mm10.chr7 111130245 871 - 145441459 I e canFam3.chr1 4647309 0 - 122678785 C e saiBol1.JH378197 5436411 2501 + 8899380 M a score=45840.000000 s hg38.chr19_GL383574v1_alt 113077 4 + 155864 cTTG s panTro5.chr19 36180712 4 + 61309027 cttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924964 4 + 64411610 cTTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336650 4 - 8369475 cttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63935053 4 - 106955855 cTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249790 4 + 53671032 cTTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703702 4 + 59248254 cTTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575809 4 - 13342542 cTTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500261 4 + 7714307 cTTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304270 4 + 50890351 cTTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936510 4 - 2385121 cTTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378692 4 + 4274983 cTTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591144 4 + 49145316 cTTG i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1646585 4 - 2680843 cTTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393770 4 - 4471408 cTTG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4647309 4 - 122678785 CTTG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 602618 256 + 2501019 I e micMur3.chr22 3988131 256 - 30143674 I e dasNov3.JH563638 383070 424 + 643850 I e otoGar3.GL873654 5516123 0 + 5549422 C e mm10.chr7 111130245 871 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=1730.000000 s hg38.chr19_GL383574v1_alt 113081 1 + 155864 -A s panTro5.chr19 36180716 1 + 61309027 -a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924968 1 + 64411610 -A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336654 1 - 8369475 -a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63935057 1 - 106955855 -A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249794 1 + 53671032 -A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703706 1 + 59248254 -A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575813 1 - 13342542 -A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500265 1 + 7714307 -A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304274 1 + 50890351 -A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936514 1 - 2385121 -A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378696 1 + 4274983 -A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591148 1 + 49145316 -A i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1646589 1 - 2680843 -A i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393774 1 - 4471408 -A i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4647313 1 - 122678785 -G i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 383494 1 + 643850 C- i dasNov3.JH563638 I 424 C 0 e proCoq1.NW_012149263v1 602618 256 + 2501019 I e micMur3.chr22 3988131 256 - 30143674 I e otoGar3.GL873654 5516123 0 + 5549422 C e mm10.chr7 111130245 871 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=154899.000000 s hg38.chr19_GL383574v1_alt 113082 10 + 155864 TTGGCCTTCT s panTro5.chr19 36180717 10 + 61309027 ttggccttct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924969 10 + 64411610 TTGGCCTTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336655 10 - 8369475 ttggccttct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63935058 10 - 106955855 TTGGCCTTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249795 10 + 53671032 TTGGCCTTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703707 10 + 59248254 TTGGCCTTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575814 10 - 13342542 TTGGCCTTCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500266 10 + 7714307 TTGGCCTTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304275 10 + 50890351 TTGGCCTTCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936515 10 - 2385121 TTGGCCTTCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378697 10 + 4274983 TTGGCCTTCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591149 10 + 49145316 TTGGCCTTCT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1646590 10 - 2680843 TTGGCCTTCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393775 10 - 4471408 TTGGCCTTCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3988387 10 - 30143674 TTGGTCTTCT i micMur3.chr22 I 256 C 0 s proCoq1.NW_012149263v1 602874 10 + 2501019 TTGGCCTTCT i proCoq1.NW_012149263v1 I 256 C 0 s canFam3.chr1 4647314 10 - 122678785 TTGGCCTTCT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 383495 10 + 643850 TCTGCCTTCT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5516123 0 + 5549422 C e mm10.chr7 111130245 871 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=334154.000000 s hg38.chr19_GL383574v1_alt 113092 22 + 155864 TGACTTGGAACTA-GTGTGGTCA s panTro5.chr19 36180727 22 + 61309027 tgacttggaacta-gtgtggtca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39924979 22 + 64411610 TGACTTGGAACTA-GTGTGGTCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336665 22 - 8369475 tgacttggaacta-gtgtggtca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63935068 22 - 106955855 TGACTTGGAACTA-GTGTGGTCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249805 22 + 53671032 TGACTTGAAACTA-GTGTGGTCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703717 22 + 59248254 TGACTTGAAACTA-GTGTGGTCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575824 22 - 13342542 TGACTTGAAACTA-GTGTGGTCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500276 22 + 7714307 TGACTTGAAACTA-GTGTGGTCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304285 22 + 50890351 TGACTTGAAACTA-GTGTGGTCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936525 22 - 2385121 TGACTTGAAACTA-GTGTGGTCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378707 22 + 4274983 TGACTTGAAACTA-GTGTGGTCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591159 22 + 49145316 TGACTTGGAACTA-GTGTGGTCA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1646600 22 - 2680843 TGACTTGGAACTA-GTGTGGTCA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393785 22 - 4471408 TGACTTGGAACTA-GTGTGGTCA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3988397 22 - 30143674 TGACTTGGAACTA-TTGTGGTCA i micMur3.chr22 C 0 I 149 s proCoq1.NW_012149263v1 602884 22 + 2501019 TGTCTTGGAGCTA-TCGTGGTCA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5516123 22 + 5549422 TGACTTGGAGCTG-TTGTGGTCA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4647324 22 - 122678785 TGACTTGGAGCTA-TTGTGGTCA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 383505 23 + 643850 TGACATGGAGCTATTTTTGGCCA i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111130245 871 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=211238.000000 s hg38.chr19_GL383574v1_alt 113114 18 + 155864 TTTCCTGAAATCTGTGAC s panTro5.chr19 36180749 18 + 61309027 tttcctgaaatctgtgac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925001 18 + 64411610 TTTCCTGAAATCTGTGAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336687 18 - 8369475 tttcctgaaatctgtgac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63935090 18 - 106955855 TTTCTTGAAATCTGTGAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249827 18 + 53671032 TTTCCTGAAATCTGTGAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703739 18 + 59248254 TTTCCTGAAATCTGTGAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575846 18 - 13342542 TTTCCTGAAATCTGTGAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500298 18 + 7714307 TTTCCTGAAATCTGTGAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304307 18 + 50890351 TTTCCTGAAATCTGTGAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936547 18 - 2385121 TTTCCTGTAATCTGTGAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378729 18 + 4274983 TTTCTTGAAATCTATGAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591181 18 + 49145316 TTTCCAGAAATCTGTGAC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1646622 18 - 2680843 TTTCCTGAAATCTGTGAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393807 18 - 4471408 TTTCCTGAAATCTGTGAC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 602906 18 + 2501019 TTTTATTAAATTTGTGAC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5516145 9 + 5549422 ---------TTTTGTGAC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4647346 18 - 122678785 TTTTCTTAACTTTGTGAC i canFam3.chr1 C 0 I 4 s dasNov3.JH563638 383528 18 + 643850 TTTTCTTAACTTCGTAAC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3988419 149 - 30143674 I e mm10.chr7 111130245 871 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=37392.000000 s hg38.chr19_GL383574v1_alt 113132 4 + 155864 TGCA s panTro5.chr19 36180767 4 + 61309027 tgca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925019 4 + 64411610 TGCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336705 4 - 8369475 tgca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63935108 4 - 106955855 TGCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30249845 4 + 53671032 TGTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703757 4 + 59248254 TGTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575864 4 - 13342542 TGTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500316 4 + 7714307 TGTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304325 4 + 50890351 TGTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936565 4 - 2385121 TGTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378747 4 + 4274983 TACA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591199 4 + 49145316 TATA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1646640 4 - 2680843 TATA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393825 4 - 4471408 TATA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 602924 4 + 2501019 TGTA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5516154 4 + 5549422 TGTA i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 383546 4 + 643850 TGTT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3988419 149 - 30143674 I e mm10.chr7 111130245 871 - 145441459 I e canFam3.chr1 4647364 4 - 122678785 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=1249281.000000 s hg38.chr19_GL383574v1_alt 113136 109 + 155864 CTTTCTCATTTGTCTTTACTG-CTTCTCTTCATACATCTACCTTGGGGCATTTTCTGAAGCCTAGTTTTGTACCTCTTACCC-CCGCTC-CAAAACATATTCCTTCCCACTT s panTro5.chr19 36180771 108 + 61309027 ctttctcatttgtctttactg-cttctcttcatacatctaccttggggcattttctgaagc-tagttttgtacctcttACCC-CCGCTC-CAAAACATGTTCCTTCCCACTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925023 109 + 64411610 CTTTCTCATTTGTCTTTACTG-CTTCTCTTCATACATCTACCTTGGGGCATTTTCTGAAGCCTAGTTTTGTACCTCTTACCC-CCGCTC-CAAAACATGTTCCTTCCCACTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336709 109 - 8369475 ctttctcatttgtctttactg-cttctcttcatACATCCACCTTGGGGCATTTTCTGAAGCCTAGCTTTGTACGTCTTACCC-CCGCTC-CAAAACATGTTCCTTCCCACTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63935112 109 - 106955855 CTTTCCCATTTGTCTTTACTG-CTTCTCTTCATATATCTACCTTGGGGCATTTTCTGAAGCCTAGCTTTGTACCTCTTACCC-CCCCTC-CAAAACATGTTCCTTCCCACTT i nomLeu3.chr10 C 0 M 670 s rheMac8.chr19 30249849 110 + 53671032 TTTTCTCGTTTGTCTTTACTG-CTTCTCTTCATACATATACCTTGGGGCATTTTCTGAAGCCTAGCTTTGTACCTCTCACCCTCCCCTC-CAAAACATGTTCCTTCCCACTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703761 110 + 59248254 TTTTCTCGTTTGTCTTTACTG-CTTCTCTTCATACATATACCTTGGGGCATTTTCTGAAGCCTAGCTTTGTACCTCTCACCCTCCCCTC-CAAAACATGTTCCTTCCCACTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575868 110 - 13342542 TTTTCTCGTTTGTCTTTACTG-CTTCTCTTCATACATATACCTTGGGGCATTTTCTGAAGCCTAGCTTTGTACCTCTCACCCTCCCCTC-CAAAACATGTTCCTTCCCACTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500320 109 + 7714307 TTTTCTTGTTTGTCTTTACTG-CTTCTCTTCATACATATACCTTGGGGCATTTTCTGAAGCCTAGCTTTGTACCTCTTACCCTCCCTTC-CAAAACATGTTCCTTCCC-CTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304329 110 + 50890351 TTTTCTCGTTTGTCTTTACTG-CTTCTCTTCATACATATACCTTGGGGCATTTTCTGAAGCCTAGCTTTGTACCTCTTACCCTCCCCTC-CAAAACATGTTCCTTCCCACTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936569 110 - 2385121 TTTTCTCGTTTGTCTTTACTG-CTTCTCTTCATACATATACCTTGGGGCATTTTCTGGAGCCTACCTTTGTACCTCTTACCCTCCCCTC-CAAAACATGTTCCTTCCCACTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378751 110 + 4274983 TTTTCTCATTTGTCTTTACTG-CTTCTCTTCATACATATACCTTGGGGCATTTTCTGAAGCCTAGCTTTGTACCTCTTACCCTCCCCTC-CAAAACATGTTCCTTCCCACTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591203 110 + 49145316 CTTTCTCATTTGTCTTTACTG-CTTCTCTTCCTACATCTACTTTGGGGCATTTTCTGAAGCCTGGCTTTGTACCTCTTACCCTCTCCCT-CAAAACATGTTCCTTCTCACTC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1646644 110 - 2680843 CTTTCTCATTTGTCTTTACTG-CTTCTCTTCCTACATCTACTTTGGGGCATTTTCTGAAGCCTGGCTTTGTACCTCTTACCCTCTCAAC-CAAAACATGTTCCTTCTCACTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393829 110 - 4471408 CTTTCTCATTTGTCTTTACTG-CTTCTCTTCCTACATCTACTTTGGGGTATTTTCTGAAGCCTGGCTTTGTACCTCTTACCCTCTCCCC-CAAAACATGTTCCTTCTCACTC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 602928 107 + 2501019 CTTTTTCATTTGTCATTGCTG----TTCCTGCTACATCTGCCTGGGGGCATTTTCTGAAGCCTAGCTTCATGCCTCTTACCCTCTCCCC-CAAAACATGCTCCTTCCCATTC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5516158 102 + 5549422 CTTTTTCATATGTCTTTGCTG----TTATTCCTATGTTTGCCTGAGGGCATTTTCTGAAACCTATCTTCATGCCT-TAACTGTCTCTCC---AGACATG--CCTTCCCACTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4647368 111 - 122678785 CTTTTTCATTTGACTTTGTTG-TTTCTCTCCCCACATCTGCCTATGAGCATTTTCCAAGGCCTCGCTTCCTTCCTCTACCTCTTTTCCCAAAAAACATGCTCCTTCCCACTC i canFam3.chr1 I 4 C 0 s dasNov3.JH563638 383550 108 + 643850 TTTTTTCACTTGTTTTTGCTGACTTTTCATCTCACATCTGCCTGGGACCATTTTCTAAGGTCTAGTTGCATGTCCCT---CCTCTTCCC-CGGTATACCCTCCTTTTCGCTG i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3988419 149 - 30143674 I e mm10.chr7 111130245 871 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=25367.000000 s hg38.chr19_GL383574v1_alt 113245 4 + 155864 ATCC s panTro5.chr19 36180879 4 + 61309027 ATCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925132 4 + 64411610 ATCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336818 4 - 8369475 ATCC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30249959 4 + 53671032 TTCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703871 4 + 59248254 TTCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575978 4 - 13342542 TTCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500429 4 + 7714307 TTCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304439 4 + 50890351 TTCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936679 4 - 2385121 TACC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378861 4 + 4274983 TTCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591313 4 + 49145316 ATCC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1646754 4 - 2680843 ATCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393939 4 - 4471408 ATCC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 603035 1 + 2501019 ---T i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5516260 1 + 5549422 ---C i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4647479 4 - 122678785 ATCC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 383658 4 + 643850 ATCT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3988419 149 - 30143674 I e mm10.chr7 111130245 871 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M e nomLeu3.chr10 63935221 670 - 106955855 M a score=319967.000000 s hg38.chr19_GL383574v1_alt 113249 26 + 155864 AGTATATGAGT---CCTGGGTAGAGAACC s panTro5.chr19 36180883 26 + 61309027 AGTATATGAGT---CCTGGGTAGAGAACC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925136 26 + 64411610 AGTATATGAGT---CCTGGGTAGAGAACC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336822 26 - 8369475 AGTATATGAGT---CCTGGGTAGAGAACC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30249963 26 + 53671032 AGTATATGAGT---CCTGGGTAGAGAACT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703875 26 + 59248254 AGTATATGAGT---CCTGGGTAGAGAACT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4575982 26 - 13342542 AGTATATGAGT---CCTGGGTAGAGAACT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500433 26 + 7714307 AGTATATGAGT---CCTGGGTAGAGAACT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304443 26 + 50890351 AGTATATGAGT---CCTGGGTAGAGAACT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936683 26 - 2385121 AGTATATGAGT---CCTGGGTAGAGAACT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378865 26 + 4274983 AGTATATGAGT---CCTGGGTAGAGAACT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591317 26 + 49145316 GTGATATGAGT---TCTGGGTAGAGAACC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1646758 26 - 2680843 AGGATATGAGT---TCTGGGTAGAGAACC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393943 26 - 4471408 ACGATATGAGT---TCTGGGTAGAGAACC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3988568 26 - 30143674 AGTATGTGAGT---CCTGGGTAGAGAACC i micMur3.chr22 I 149 C 0 s proCoq1.NW_012149263v1 603036 26 + 2501019 AGTATGTGAGT---TCTGGGTAGAGAACC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5516261 29 + 5549422 AATATATGAGTGAGTTCCTGTAGAGAACC i otoGar3.GL873654 C 0 I 3 s canFam3.chr1 4647483 26 - 122678785 AGTGTATGACT---TCCAGGCAGAGAATC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 383662 26 + 643850 CATATGTGACT---TTTAGGTAGAGTACC i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111130245 871 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M e nomLeu3.chr10 63935221 670 - 106955855 M a score=229190.000000 s hg38.chr19_GL383574v1_alt 113275 22 + 155864 ACCTCATTTCCTTACCTCTGCC s panTro5.chr19 36180909 22 + 61309027 ACCTCATTTCCTTACCTCTGCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925162 22 + 64411610 ACCTCATTTCCTTACCTCTGCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336848 22 - 8369475 ACCTCATTTCCTTACCTCTGCC i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30249989 22 + 53671032 ACCTCATTTCCTCACCTCTGCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703901 22 + 59248254 ACCTCATTTCCTCACCTCTGCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576008 22 - 13342542 ACCTCATTTCCTCACCTCTGCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500459 22 + 7714307 ACCTCATTTCCTCACCTCTGCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304469 22 + 50890351 ACCTCATTTCCTCACCTCTGCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936709 22 - 2385121 ACCTCATTTCCTCACCTCTGCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378891 22 + 4274983 GCCTCATTTCCTCACCTCTGCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591343 22 + 49145316 ACCTTACTTCCTCATCTCTGCC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1646784 22 - 2680843 ACCTTACTTCCTCATCTCTGCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393969 22 - 4471408 ACCTTACTTCCTCATCTCTGCC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3988594 22 - 30143674 ACCTCAATCCCTCACTCCTGCC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 603062 22 + 2501019 ACCTCACTCCCTCACCCCTGCC i proCoq1.NW_012149263v1 C 0 I 71 s canFam3.chr1 4647509 22 - 122678785 ACTTTACCCCCTCACCCTTGTC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 383688 16 + 643850 ACTTCACCCGCCAGCC------ i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111130245 871 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M e nomLeu3.chr10 63935221 670 - 106955855 M a score=240755.000000 s hg38.chr19_GL383574v1_alt 113297 25 + 155864 ACCACTTAGTGA-CCCCCGACTCAGA s panTro5.chr19 36180931 25 + 61309027 ACCACTTAGTGA-CCCCCGACTCAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925184 25 + 64411610 ACCACTTAGTGA-CCCCCGACTCAGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336870 25 - 8369475 ACCACTTAGTGA-CCCCCGACTCAGA i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30250011 25 + 53671032 ACCACTTAGTGA-CCCTCGACTCAGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703923 25 + 59248254 ACCACTTAGTGA-CCCTCGACTCAGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576030 25 - 13342542 ACCACTTAGTGA-CCCTCGACTCAGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500481 25 + 7714307 ACCACTTAGTGA-CCCTCGACTCAGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304491 25 + 50890351 ACCACTTAGTGA-CCCTCGACTCAGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936731 25 - 2385121 ACCACTTAGTGA-CCCTCGACTCAGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378913 25 + 4274983 ACCACTTAGTGA-CCCTCGACTCAGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591365 25 + 49145316 ACCACTTAGTGA-CCCCTGACCTAGA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1646806 26 - 2680843 ACCACTTAGTGACCCCCTGACCTAGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 393991 25 - 4471408 ACCACTTAGTGA-CCCCTGACCTAGA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3988616 25 - 30143674 TTCATTTAGTGA-CCTCCAATTCAGA i micMur3.chr22 C 0 C 0 s canFam3.chr1 4647531 24 - 122678785 CCCATTGAGTGA-CCC-CAGCTCACA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 383704 24 + 643850 TTCACTCAGTGA-CCC-CAATTCAGA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 603084 71 + 2501019 I e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111130245 871 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M e nomLeu3.chr10 63935221 670 - 106955855 M a score=294362.000000 s hg38.chr19_GL383574v1_alt 113322 30 + 155864 GTTTTCTGCAGGTCAATTCTTTTTCTCCTG s panTro5.chr19 36180956 30 + 61309027 GTTTTCTGCAGGTCAGTTCTTTTTCTCCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925209 30 + 64411610 GTTTTCTGCAGGTCAGTTCTTTTTCTCCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336895 30 - 8369475 GTTTTCTGCAGGTCAATTCTTTTTCTCCTG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30250036 30 + 53671032 CTTTTCTGCAAGTCAGCTCTTTTTCTCCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703948 30 + 59248254 CTTTTCTGCAAGTCAGCTCTTTTTCTCCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576055 30 - 13342542 CTTTTCTGCAAGTCAGCTCTTTTTCTCCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500506 30 + 7714307 CTTTTCTGCAAGTCAGTTCTTTTTCTCCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304516 30 + 50890351 CTTTTCTGCAAGTCAGTTCTTTTTCTCCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936756 30 - 2385121 CTTTTCTGCAAGTCAGTTCTTTTTCTCCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378938 30 + 4274983 CTTTTCTGCAAGTCAATTCTTTTTCTCCCG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591390 30 + 49145316 CTTTTCCACAAGTCAGTTCTTTTTCACCTG i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1646832 30 - 2680843 CTTTCCTGCAAGTCAGTTCTTTTTCTCCTG i cebCap1.NW_016107633v1 C 0 I 14 s aotNan1.NW_018505377v1 394016 30 - 4471408 CTTTTCCGCAAGTTAGTTCTTTTTCTCCTG i aotNan1.NW_018505377v1 C 0 I 36 s micMur3.chr22 3988641 28 - 30143674 CTT--CTGCAAATCATTTCTTTATCTCCCT i micMur3.chr22 C 0 C 0 s mm10.chr7 111131116 30 - 145441459 GCTTTCTCTATGTCAATTCTTTATTTCCTT i mm10.chr7 I 871 C 0 s canFam3.chr1 4647555 28 - 122678785 CTTTGCTACAAGTCATTTCTTTATCTCC-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 383728 24 + 643850 CTTTTCTGCAAGTCAGGTCTTTAT------ i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 603084 71 + 2501019 I e otoGar3.GL873654 5516290 3 + 5549422 I e saiBol1.JH378197 5436411 2501 + 8899380 M e nomLeu3.chr10 63935221 670 - 106955855 M a score=103445.000000 s hg38.chr19_GL383574v1_alt 113352 16 + 155864 TTCAGTAACCCCTGGA s panTro5.chr19 36180986 16 + 61309027 TTCAGTAACCCCTGGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925239 16 + 64411610 TTCAGTAACCCCTGGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336925 16 - 8369475 TTCAGTAACCCCTGGA i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30250066 16 + 53671032 CTCAGTAACCCCTGGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703978 16 + 59248254 CTCAGTAACCCCTGGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576085 15 - 13342542 CTCA-TAACCCCTGGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500536 16 + 7714307 CTCAGTAACCCCTGGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304546 16 + 50890351 CTCAGTAACCCCTGGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936786 16 - 2385121 CTCAGTAACCCCTGGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378968 16 + 4274983 CTCAGTAACCCCTGGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591420 5 + 49145316 ---------CCCT--C i calJac3.chr22 C 0 C 0 s micMur3.chr22 3988669 16 - 30143674 CTGACTGACCCCTGGA i micMur3.chr22 C 0 C 0 s mm10.chr7 111131146 16 - 145441459 CTAAATGACCCCTAGA i mm10.chr7 C 0 I 466 s canFam3.chr1 4647583 14 - 122678785 --AACTGACCCCTGGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 383752 12 + 643850 ----ATGATCCCTGGA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 603084 71 + 2501019 I e otoGar3.GL873654 5516290 3 + 5549422 I e aotNan1.NW_018505377v1 394046 36 - 4471408 I e cebCap1.NW_016107633v1 1646862 14 - 2680843 I e saiBol1.JH378197 5436411 2501 + 8899380 M e nomLeu3.chr10 63935221 670 - 106955855 M a score=15351.000000 s hg38.chr19_GL383574v1_alt 113368 2 + 155864 CA s panTro5.chr19 36181002 2 + 61309027 CA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925255 2 + 64411610 CA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336941 2 - 8369475 CA i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30250082 2 + 53671032 CA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703994 2 + 59248254 CA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576100 2 - 13342542 CA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500552 2 + 7714307 CA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304562 2 + 50890351 CA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936802 2 - 2385121 CA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378984 2 + 4274983 CA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591425 2 + 49145316 TC i calJac3.chr22 C 0 C 0 s micMur3.chr22 3988685 2 - 30143674 CA i micMur3.chr22 C 0 C 0 s canFam3.chr1 4647597 2 - 122678785 CA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 383764 2 + 643850 CA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 603084 71 + 2501019 I e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131162 466 - 145441459 I e aotNan1.NW_018505377v1 394046 36 - 4471408 I e cebCap1.NW_016107633v1 1646862 14 - 2680843 I e saiBol1.JH378197 5436411 2501 + 8899380 M e nomLeu3.chr10 63935221 670 - 106955855 M a score=53124.000000 s hg38.chr19_GL383574v1_alt 113370 7 + 155864 TGTTCCT s panTro5.chr19 36181004 7 + 61309027 TGTTGCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925257 7 + 64411610 TGTTGCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336943 7 - 8369475 TGTGCCT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30250084 7 + 53671032 TATTCCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34703996 7 + 59248254 TATTCCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576102 7 - 13342542 TATTCCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500554 7 + 7714307 TATTCCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304564 7 + 50890351 TGTTCCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936804 7 - 2385121 TATTCCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378986 7 + 4274983 TGTTCCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591427 7 + 49145316 TTTTCCT i calJac3.chr22 C 0 C 0 s micMur3.chr22 3988687 7 - 30143674 TGTTCCT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 603155 7 + 2501019 TGTTCCT i proCoq1.NW_012149263v1 I 71 C 0 s canFam3.chr1 4647599 7 - 122678785 TGTTCTC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 383766 7 + 643850 TATACCT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131162 466 - 145441459 I e aotNan1.NW_018505377v1 394046 36 - 4471408 I e cebCap1.NW_016107633v1 1646862 14 - 2680843 I e saiBol1.JH378197 5436411 2501 + 8899380 M e nomLeu3.chr10 63935221 670 - 106955855 M a score=232853.000000 s hg38.chr19_GL383574v1_alt 113377 22 + 155864 GAGGCCATGC-TTTCTCCAGGTG s panTro5.chr19 36181011 22 + 61309027 GAGGCCATGC-TTTCTCCAGGTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925264 22 + 64411610 GAGGCCATGC-TTTCTCCAGGTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336950 22 - 8369475 GAGGCCATGC-TTTCTCCAGGTG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30250091 22 + 53671032 GAGGCCATAT-TTTCTCCAGGTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34704003 22 + 59248254 GAGGCCATAT-TTTCTCCAGGTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576109 22 - 13342542 GAGGCCATAT-TTTCTCCAGGTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500561 22 + 7714307 GAGGCCATAT-TTTCTCCAGGTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304571 22 + 50890351 GAGGCCATAT-TTTCTCCAGGTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936811 22 - 2385121 GAGGCCATAT-TTTCTCCAGGTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2378993 22 + 4274983 GAGGCCATAC-TTTCTCCAGGTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591434 22 + 49145316 GAGGCCATAC-TTCCTCTAGGTG i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1646876 22 - 2680843 GAGGCCATAC-TTTCTCTAGGTG i cebCap1.NW_016107633v1 I 14 C 0 s micMur3.chr22 3988694 22 - 30143674 GAGGCCATAC-TTTCTCCCGGTG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 603162 22 + 2501019 GAGGCCCTGC-TTTCTCCAGGTG i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4647606 22 - 122678785 GAGGCCATCC-TCTCTCCAGCTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 383773 23 + 643850 GAGGCAGTACTTTTTTCCTGGTG i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131162 466 - 145441459 I e aotNan1.NW_018505377v1 394046 36 - 4471408 I e saiBol1.JH378197 5436411 2501 + 8899380 M e nomLeu3.chr10 63935221 670 - 106955855 M a score=42490.000000 s hg38.chr19_GL383574v1_alt 113399 5 + 155864 AAGAA s panTro5.chr19 36181033 5 + 61309027 AAGAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925286 5 + 64411610 AAGAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336972 5 - 8369475 AAGAA i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30250113 5 + 53671032 AAGAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34704025 5 + 59248254 AAGAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576131 5 - 13342542 AAGAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500583 5 + 7714307 AAGAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304593 5 + 50890351 AAGAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936833 5 - 2385121 AAGAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2379015 5 + 4274983 AAGAA i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1646898 5 - 2680843 AAGAA i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3988716 5 - 30143674 ATGAA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 603184 5 + 2501019 ATGAA i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4647628 5 - 122678785 AGGGA i canFam3.chr1 C 0 I 8 s dasNov3.JH563638 383796 5 + 643850 ATGGA i dasNov3.JH563638 C 0 I 6 e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131162 466 - 145441459 I e aotNan1.NW_018505377v1 394046 36 - 4471408 I e saiBol1.JH378197 5436411 2501 + 8899380 M e calJac3.chr22 28591456 0 + 49145316 C e nomLeu3.chr10 63935221 670 - 106955855 M a score=8281.000000 s hg38.chr19_GL383574v1_alt 113404 1 + 155864 A s panTro5.chr19 36181038 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925291 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336977 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30250118 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34704030 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576136 1 - 13342542 A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500588 1 + 7714307 A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304598 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936838 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2379020 1 + 4274983 A i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1646903 1 - 2680843 A i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3988721 1 - 30143674 A i micMur3.chr22 C 0 I 30 s proCoq1.NW_012149263v1 603189 1 + 2501019 A i proCoq1.NW_012149263v1 C 0 I 6 e dasNov3.JH563638 383801 6 + 643850 I e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131162 466 - 145441459 I e canFam3.chr1 4647633 8 - 122678785 I e aotNan1.NW_018505377v1 394046 36 - 4471408 I e saiBol1.JH378197 5436411 2501 + 8899380 M e calJac3.chr22 28591456 0 + 49145316 C e nomLeu3.chr10 63935221 670 - 106955855 M a score=65373.000000 s hg38.chr19_GL383574v1_alt 113405 11 + 155864 ATATCACTTCT s panTro5.chr19 36181039 11 + 61309027 ATATCACTTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925292 11 + 64411610 ATATCACTTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336978 11 - 8369475 ATATCACTTCT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30250119 11 + 53671032 ATATCACTTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34704031 11 + 59248254 ATATCACTTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576137 11 - 13342542 ATATCACTTCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500589 11 + 7714307 ATATCACTTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304599 11 + 50890351 ATATCACTTCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936839 11 - 2385121 ATATCACTTCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2379021 11 + 4274983 ATATCACTTCT i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1646904 11 - 2680843 ATATGACTTct i cebCap1.NW_016107633v1 C 0 I 403 e proCoq1.NW_012149263v1 603190 6 + 2501019 I e micMur3.chr22 3988722 30 - 30143674 I e dasNov3.JH563638 383801 6 + 643850 I e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131162 466 - 145441459 I e canFam3.chr1 4647633 8 - 122678785 I e aotNan1.NW_018505377v1 394046 36 - 4471408 I e saiBol1.JH378197 5436411 2501 + 8899380 M e calJac3.chr22 28591456 0 + 49145316 C e nomLeu3.chr10 63935221 670 - 106955855 M a score=1254238.000000 s hg38.chr19_GL383574v1_alt 113416 301 + 155864 ggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggtgagcggatcacgaggtcaggagaccgagaccatcttggctaacatggtgaaaccccatctctactaaaaaaaaaatattaaaaaattagccggacatggcgatgggcgcctgtagtcccagctactcaggaggctgaggtaggagaatggtgtgaacctgggaggcggagcttgcagtgagctgagatcgtgccactgcactccagcctgggcgacagagtaagactccgtctc---------a---aaaaaaaaaagaa s panTro5.chr19 36181050 297 + 61309027 ggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggtgagtggatcacgaggtcaggagaccgagaccatcttggctaacacggtgaaaccccatctctactaaaaaaaa--tattaaaaaattagctggacatggcgatgggcgcctgtagtcccagctactcaggaggctgaggtaggagaatggtgtgaacctgggaggcggagcttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagtaagactccgtctc---------a---aaaaaaaa--gaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925303 295 + 64411610 ggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggtgagtggatcacgaggtcaggagaccgagaccatcttggctaacacggtgaaaccccatctctactaaaaaaa---tattaaaaaattagccggacatggcgatgggcgcctgtagtcccagctactcaggaggctgaggtaggagaatggtgtgaacctgggaggcggagcttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagtaagactccgtctc---------a---aaaaaaa---gaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6336989 298 - 8369475 ggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggtgagcggatcacgaggtcaggagaccgagaccatcttggctaacacggtgaaaccccatctctactaaaaaata--tataaaagagttagccggacatggcgatgggcgcctgtagtcccagctactcaggcggctgaggtaggagaatggcgtgaacctgggaggcggagcttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagtaagactccgtctc---------a---aaaaaaaaa-gaa i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30250130 301 + 53671032 ggccaggcatagtggctcatgtctgtaatcccagcactttgggaaggcgagtcgggcagatcatgaggtcaggagaccaagtccatcctggctaacacagtgaaaccacatctctactaaaaaaac--tacaaaaaaattagccgggtgtggtggtgggcccctgtagtcccagttactctggaggctgaggtaggagaatggtgtgaacccgggag---------gcagtgagccgcaatcgcaccgctgcactccagcttgggcgacagagtgagactccatctcaaaaaaaaaaaaaaaaaaaaga-aaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34704042 298 + 59248254 ggccaggcatagtggctcatgtctgtaatcccagcactttgggagggcgagtcgggcagatcatgaggtcaggagaccaagtccatcctggctaacacagtgaaaccacatctctactaaaaaaac--tacaaaaaaattagccgggtgtggtggtgggcccctgtagtcccagttactctggaggctgaggtaggagaatggtgtgaacccgggag---------gcagtgagccgcaatcgcaccgctgcactccagcttgggcgacagagtgagactccatctcaaaaaaaaaa---aaaaaaaga-aaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576148 299 - 13342542 ggccaggcatagtggctcatgtctgtaatcccagcactttgggagggcgagtcgggcagatcatgaggtcaggagaccaagtccatcctggctaacacggtgaaaccacatctctactaaaaaaac--tacaaaaaaattagccgggtgtggtggtgggcccctgtagtcccagttactctggaggctgaggtaggagaatggtgtgaacccgggag---------gcagtgagccgcaatcgcacctctgtactccagcttgggcgacagagtgagactccatctcaaaaaaaaaa--gaaaaaaaga-aaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500600 298 + 7714307 ggccaggcatagtggctcatgtctgtaatcccagcactttgggagggcgagtcgggcagatcatgaggtcaggagaccaagtccatcctggctaacacggtgaaaccacatctctactaaaaaaac--tacaaaaaaattagccgggtgtggtggtgggcccctgtagtaccagttactctggaggctgaggtaggagaatggtgtgaacccgggag---------gcagtgagccacaatcgcaccgctgcactccagcttgggtgacagagtgagactccatctcaaaaaaaaaa---aaaaaaaga-aaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304610 291 + 50890351 ggccaggcacagtggctcatgtgtgtaatcccagcactttgggagggcgagtcgggcagatcatgaggtcagaagaccaagtccatcctggctaacacggtgaaaccacatctctactaaaataac--tacaaaaaaattagccgggtgtggtggtgggcccctgtagtcccatttactctgaaggctgaggtaggagaatggtgtgaacccgggag---------gcagtgagccgcgatcacaccgctgcactccagcttgggcgacagagcgagactccatctc-------aaa---aaaaaaaga-aaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 936850 297 - 2385121 ggccaggcatagtggctcatgtctgtaatcccagcactttgggagggcgagttgggcagatcatgaggtcaggagaccaagtccatcctggctaacacggtgaaaccacatctctgctaaaaaaac--tacaaaaaaattagccgggtgtggtggtgggcccctgtagtcccagttactctggaggctgaggtaggagaatggtgtgaacccgggag---------gcagtgagccgcaatcgcaccgctgcactccagcttgggcgacagagtgagactccatctc-aaaaaaaaa---aaaaaaaga-aaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2379032 288 + 4274983 ggctgggcacagtggctcacgtctgtaatcccagcactttgggagggcgagttgggcggatcatgaggtcaggagaccaagtccatcctggctaacacggtgaaaccacatctctactaaaaaaac--tacaaaacaattagccgggtgtggtggtgggcccctatagtcccagttactctggaggctgaggtaagagaatggtgtgaa-ccgggag---------gcggttagccgcgatcgcactgctgcactccagcttgggtgacagagcaagactccatctc---------a---aaaaaaaga-aaa i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 603190 6 + 2501019 I e micMur3.chr22 3988722 30 - 30143674 I e dasNov3.JH563638 383801 6 + 643850 I e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131162 466 - 145441459 I e canFam3.chr1 4647633 8 - 122678785 I e aotNan1.NW_018505377v1 394046 36 - 4471408 I e cebCap1.NW_016107633v1 1646915 403 - 2680843 I e saiBol1.JH378197 5436411 2501 + 8899380 M e calJac3.chr22 28591456 0 + 49145316 C e nomLeu3.chr10 63935221 670 - 106955855 M a score=633765.000000 s hg38.chr19_GL383574v1_alt 113717 98 + 155864 aagaaaaTATCACTTctttgcgaggacaaggtgagaggattacatgctctcaggagttggagaccagcctgggcaacatagtgagacctctgtctctt s panTro5.chr19 36181347 98 + 61309027 aagaaaaTATCACTTctttgcgaggacaaggtgagaggattacgtgctctcaggagttggagaccagcctgggtaacatagtgagacctctgtctctt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925598 98 + 64411610 aagaaaaTATCACTTctttgcgaggacaaggtgagaggattacgtgctctcaggagttggagaccagcctgggtaacatagtgagacctctgtctctt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6337287 98 - 8369475 aagaaaaTATCACTTctttgcgaggacaaggtgagaagattacgtgctctcaggagttggagaccagcctgggcaacatagtgagacctctgtctctt i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30250431 98 + 53671032 aagaaAATATCATTTctttgcaaggacaaggtgggagttttacttgatctcaggagttggagaccagcctgggcaacatagtgagacctccgtctctt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34704340 98 + 59248254 aagaaaaTATCATTTctttgcaaggacaaggtgggagttttacttgatctcaggagttggagaccagcctgggcaacatagtgagacctccgtctctt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576447 98 - 13342542 aagaaaaTATCATTTctttgcagggacaaggtgggagttttacttgatctcaggagttggagaccagcctgggcaacatagtgagacctccgtctctt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500898 98 + 7714307 aagaaaaTATCATTTctttgcaaggacaaggtgggagttttacttgatctcaggagttggagaccagcctgggcaacatagtgagacctccgtctctt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304901 98 + 50890351 aagaaaaTATCATTTctttgcaaggacaaggtgggagttttacttgatctcaggagttggagaccagccagggcaacataatgagacctccgtctctt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 937147 98 - 2385121 aagaaaaTATCATTTctttgcaaggacaaggtgggagttttacttgatctcaggagttggagaccagcctgggcaacatagtgagacgtccgtctctt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2379320 98 + 4274983 aagaaaaTATCATTTctttgcaaggacaaggtgggagttttactcgatctcaggagttggagaccagcctgggcaacatagtgagacctccgtctctt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591456 98 + 49145316 AAGAAAATATGACTTctttgcgaggacaaggtgggaggattacttgatatcaggagttggagaccagcctgggcaacatagtgagaccttcgtctctt i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 394082 93 - 4471408 AAGAAAATATGACTTctttgtgaggacaaggtgggaggattacttgatctcaggagttgg-----agcctgggcaacatagtgagacctttgcctctt i aotNan1.NW_018505377v1 I 36 C 0 e proCoq1.NW_012149263v1 603190 6 + 2501019 I e micMur3.chr22 3988722 30 - 30143674 I e dasNov3.JH563638 383801 6 + 643850 I e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131162 466 - 145441459 I e canFam3.chr1 4647633 8 - 122678785 I e cebCap1.NW_016107633v1 1646915 403 - 2680843 I e saiBol1.JH378197 5436411 2501 + 8899380 M e nomLeu3.chr10 63935221 670 - 106955855 M a score=1541498.000000 s hg38.chr19_GL383574v1_alt 113815 211 + 155864 aaaaaaaTGAATTTTAggtctggcacaggggctcatgcctgtgatcccagaagtttgggaggccaaggtgggaggattg---------------cttgagatcagcctaggcaacatagtgagactccaaaattatctaggtgtggtggtccatgcctataattccagctacttgggaggctgaggccggaggattgcttgagcctaggaggttaaggattcagtg s panTro5.chr19 36181445 211 + 61309027 aaaaaaaTGAATTTTAggtctggcacaggggctcatgcctgtgatcccagaactttgggaggccaaggtgggaggattg---------------cttgagatcagcctaggcaacatagtgagactccaaaattatctaggtgtggtggtccgtgcctataattccagctacttgggaggctgaggccggaggattgcttgagcctaggaggttaaggattcagtg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925696 209 + 64411610 --aaaaaTGAATTTTAggtctggcacaggggctcatgcctgtgatcccagaactttgggaggccaaggtgggaggattg---------------cttgagatcagcctaggcaacatagtgagactccaaaattatctaggtgtggtggtccgtgcctataattccagctacttgggaggctgaggccggaggattgcttgagcctaggaggttaaggattcagtg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6337385 211 - 8369475 aaaaaaaTGAATTTTAggtctggcacaggggctcatgcctgtgatcccagaactttgggaggccaaggggggaggattg---------------cttgagatcagcctaggcaacatagtgagactccaaaattatctaggtgtggtggtccatgcctataattccagctacttgggaggctgaggccggaggattgcttgagcctaggaggttaaggattcagtg i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30250529 211 + 53671032 aaaaaaaTGAATTTTAGATTgggcacaggggttcatgcctgtgatcccagaacttcgggaggccaaggtgggaggattg---------------cttgagatcagcctaggcaacatagtgagaccccaaaattttctaggtgtggtggtccgtgcctgtctttccagctagttgggaggctgaggcgggaggattgcttgagcctgggaggttaaggattcagta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34704438 211 + 59248254 aaaaaaaTGAATTTTAGATTgggcacaggggttcatgcctgtgatcccagaacttcgggaggccaaggtgggaggattg---------------cttgagatcagcctaggcaacatagtgagaccccaaaattttctaggtgtggtggtccgtgcctgtctttccagctagttgggaggctgaggcgggaggattgcttgagcctgggaggttaaggattcagta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576545 211 - 13342542 aaaaaaaTGAATTTTAGATTgggcacaggggttcatgcctgtgatcccagaacttcgggaggccaaggtgggaggattg---------------cttgagatcagcctaggcaacatagtgagaccccaaaattttctaggtgtggtggtccgtgcctgtctttccagctacttgggaggctgaggcgggaggattgcttgagcctgggaggttaaggattcagta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5500996 211 + 7714307 aaaaaaaTGAATTTTAGATTgggcacaggggttcatgcctgtgatcccagaacttcgggaggccaaggtgggaggattg---------------cttgagatcagcctaggcaacatagtgagaccccaaaatttgctaggtgtggtggtccgtgcctgtctttccagctacttgggaggctgaggcgggaggattgcttgagcctgggaggttaagggttcagta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29304999 211 + 50890351 taaaaaatGAATTTTAGATTgggcacaggggctcatgcctgtgatcccagaacttcgggaggccaaggtgggaggattg---------------cttgagatcaccctaggcaacatagtgagaccccaaaattttctaggtgtggtggtccgtgcctgtctttccagctacttgggaggctgaggcgggaggattgcttgagtctaggaggttaaggattcagta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 937245 211 - 2385121 aaaaaaaTGAATTTTAGATTgggcacaggggttcatgcctgtgatcccagaacttcgggaggccaaggtgggaggattg---------------cttgagatcagcctaggcaacatagggagaccccaaaatttgctaggtgtggtggtccgtgcctgtctttccagctacttgggaggctgaggcgggaggattgcttgagcctgggaggttaaggattcagta i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2379418 211 + 4274983 aaaaaaaTGAATTTTAGATTgggcacaggggctcatgcctgtgatcccagaacttcgggaggccaaggtgggaggattg---------------cttgagatcagcctaggcaacatagtgagaccccaaaattatctaggtgtggtggtccatgcctgtctttctagctacttgggaggctgaggcggaaggattgcttgagcctgggaggttaaggattcagta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591554 219 + 49145316 ccgaaaatGAATTTTAggcccggtgcagaggcttatgcttgtgatcccagaactttgaaaggccaaactgggaggattgcttacacccaggag-tttgagatcagcctaggcaacatagtgaggcccgaaaattatctgggcgtgatggcacgtgcctgt------agccacttgggaggctgaggcaggaggattgcttgagcctgggaggtcaaggattcagtg i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1647318 225 - 2680843 aaaaaaaTGAATTTTAggcccggtgcagaggctcatgcctgtgatcccagaactttgaaaggccaaactgggagaattgcttgcgcacaggag-tttgagatcagcctaggcaacatagtgagcccagaaaattatctgggcgtggtggcacgtgcctgtagtttcagccacttgggaggctgaggcaggaggattgcttgagcctgagaggttaaggattcagtg i cebCap1.NW_016107633v1 I 403 C 0 s aotNan1.NW_018505377v1 394175 226 - 4471408 caaaaaatGAATTTTAggcccagtgcagaggctcatgcttgtgatctcacaactttgaaaggccaaactgggaggattgcttgtgcccaggagttttgagatcagcctaggcaacataatgagccctgaaaattatctgggcgtggtggcacgtgcctgtagtttcagccacttgggaggctgaggcaggaggactgcttgagcctgggaggtcaaggattcagtg i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 603190 6 + 2501019 I e micMur3.chr22 3988722 30 - 30143674 I e dasNov3.JH563638 383801 6 + 643850 I e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131162 466 - 145441459 I e canFam3.chr1 4647633 8 - 122678785 I e saiBol1.JH378197 5436411 2501 + 8899380 M e nomLeu3.chr10 63935221 670 - 106955855 M a score=587152.000000 s hg38.chr19_GL383574v1_alt 114026 88 + 155864 aactgtgattgtgccactgcactccagcccaagcaacagagcgagaccctgtctcaaaataaataagtaaataaataaataaataaat- s panTro5.chr19 36181656 88 + 61309027 aactgtgattgtgccgctgcactccagcccaagcaacagagcgagaccctgtctcaaaataaataagtaaataaataaataaataaat- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925905 84 + 64411610 aactgtgattgtgccactgcactccagcccaagcaacagagcgagaccctgtctcaaaataaa----taaataaataaataaataaat- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6337596 88 - 8369475 aactgtgattgtgccactgcactccagcccaagcaacagagcgagaccctgtctcaaaataaataagtagataaataaataaataaat- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63935897 86 - 106955855 aactgtgat--tgccactgcactccagcccaagcaacagagcgagaccctgtctcaaaataaataagtaaataaataaataaataaat- i nomLeu3.chr10 M 670 C 0 s rheMac8.chr19 30250740 80 + 53671032 aactgtgattttgcccctgtactccagcccaagcaacagagagagaccctgtctcaaaataaa----taagtaag----taaataaaT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34704649 80 + 59248254 aactgtgattttgcccctgtactccagcccaagcaacagagagagaccctgtctcaaaataaa----taaGTAAG----TAAATAAAT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576756 84 - 13342542 aactgtgattttgcccctgtactccagcccaagcagcagagagagaccctgtctcaaaataaa----taagtaagtaaataaataaat- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5501207 84 + 7714307 aactgtgattttgcccctgtactccagcccaagcagcagagtgagaccctgtctcaaaataaa----taagtaagtaaataaataaat- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29305210 80 + 50890351 aactgtgattttgcccctgtactccagcccaagcagcagagtgagaccctgtctcaaaataaa--------taaataaataaataaat- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 937456 84 - 2385121 aactgtgattttgcccctgtactccagcccaagcagcagagtgagaccctgtctcaaaataaa----taagtaagtaaataaataaat- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2379629 75 + 4274983 aactgtgattgtgcccctgtactccagcccaagcagcagagtgagaccctgtctcaaaataaa----taagtaaaT---------AAT- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591773 80 + 49145316 aattgtgattgtgccagttcactctagcttaggcaacagagctagatcctttctcaaaaTAAG----TACTTAAATAAATAAAT----- i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1647543 85 - 2680843 aactatgattgtgccgttgcactctagcccaagcaacagagctagatcctttctcaaaataag----taaataaataaataaataaata i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 394401 72 - 4471408 aactgtgattgtgctgctgcactctagcccaagcaacagagctagatcctttctcaaaa------------taaataaataaaT----- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 603190 6 + 2501019 I e micMur3.chr22 3988722 30 - 30143674 I e dasNov3.JH563638 383801 6 + 643850 I e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131162 466 - 145441459 I e canFam3.chr1 4647633 8 - 122678785 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=12376.000000 s hg38.chr19_GL383574v1_alt 114114 1 + 155864 a s panTro5.chr19 36181744 1 + 61309027 a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925989 1 + 64411610 a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6337684 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63935983 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30250820 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34704729 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576840 1 - 13342542 a i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5501291 1 + 7714307 a i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29305290 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 937540 1 - 2385121 a i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2379704 1 + 4274983 A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591853 1 + 49145316 A i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1647628 1 - 2680843 a i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 394473 1 - 4471408 A i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 603196 1 + 2501019 A i proCoq1.NW_012149263v1 I 6 C 0 s dasNov3.JH563638 383807 1 + 643850 A i dasNov3.JH563638 I 6 C 0 e micMur3.chr22 3988722 30 - 30143674 I e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131162 466 - 145441459 I e canFam3.chr1 4647633 8 - 122678785 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=311951.000000 s hg38.chr19_GL383574v1_alt 114115 27 + 155864 TCACTTATCAAGGTGTCC-TGTCCTTCC s panTro5.chr19 36181745 27 + 61309027 CCACTTATCAAGGTGTCC-TGTCCTTCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39925990 27 + 64411610 TCACTTATCAAGGTGTCC-TGTCCTTCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6337685 27 - 8369475 TCACTTATCAAGGTGTCC-TGTCCTTCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63935984 27 - 106955855 TCACTTATCAAGGTGTCC-TGTCCTTTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30250821 27 + 53671032 TCACTTATCAAAGTGTCC-TTTCCTTCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34704730 27 + 59248254 TCACTTATCAAAGTGTCC-TGTCCTTCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576841 27 - 13342542 TCACTTATCAAAGTGTCC-TGTCCTTCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5501292 27 + 7714307 TCACTTATCAAAGTGTCC-TGTCCTTCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29305291 27 + 50890351 TCACTTATCAAAGTGTCC-TGTCCTTCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 937541 27 - 2385121 TCACTTATCAAAGTGTCC-TGTCCTTCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2379705 27 + 4274983 TCACTTATCAAAGTGTCC-TGTCCTTCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591854 27 + 49145316 TCACTTATCAAGGTGTCC-TGTTCTTCC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1647629 27 - 2680843 TCACTTACCAAGGTGTCC-TGTTCTTCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 394474 27 - 4471408 TCACTCATCAAGGTGTCC-TGTTCTTCC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 603197 27 + 2501019 TCACTTCTCAAGGTGGCC-TGTCCTTCA i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4647641 28 - 122678785 TTGCTTCCCAAGGTGGCCTTGTCCTTCA i canFam3.chr1 I 8 C 0 s dasNov3.JH563638 383808 27 + 643850 TCCTTTCCCAAACTGGCC-TGTTCTTCT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3988722 30 - 30143674 I e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131162 466 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=936270.000000 s hg38.chr19_GL383574v1_alt 114142 78 + 155864 TGACTCTTAAGGTTCTTACCAGCCGGTGAATCACATCTTCCTTCTTGATATGGATTGTATTTGCCATTTGCTTTCTAT s panTro5.chr19 36181772 78 + 61309027 TGACTCTTAAGGTTCTTACCAGCTGGTGAATCACATCTTCCTTCTTGATATGGATTGTATTTGCCATTTGCTTTCTAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39926017 78 + 64411610 TGACTCTTAAGGTTCTTACCAGCTGGTGAATCACATCTTCCTTCTTGATATGGATTGTATTTGCCATTTGCTTTCTAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6337712 78 - 8369475 TGACTCTTAAGGTTCTTACCAGCTGGTGAATCACATCTTCCTTCTTGATATGGATTGTATTTGCCATTTGCTTTCTAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63936011 78 - 106955855 TGATTCTTAAGGTTCTTACCAGCTGGTGAATCACGTCTTCCTTCTTGATATGGATTGTATTTGCCATTTGCTTTCTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30250848 77 + 53671032 TGACTC-TGAGGTTCTTACCAGCTGATGAATCACATCTTCCTTCTTGATATGGATTGTATTTGCCATTTGCTTTCTAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34704757 77 + 59248254 TGACTC-TGAGGTTCTTACCAGCTGATGAATCACATCTTCCTTCTTGATATGGATTGTATTTGCCATTTGCTTTCTAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4576868 77 - 13342542 TGACTC-TGAGGTTCTTACCAGCTGATGAATCACATCTTCCTTCTTGATATGGATTGTATTTGCCATTTGCTTTCTAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5501319 77 + 7714307 TGACTC-TGAGGTTCTTACCAGCTGATGAATCACATCTTCCTTCTTGATATGGATTGTATTTGCCATTTGCTTTCTAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29305318 77 + 50890351 TGACTC-TGAGATTCTTACCAGCTGGTGAATCACATCTTCCTTCTTGATATGGGTTGTATTTGCCATTTGCATTCTAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 937568 77 - 2385121 TGACTC-TGAGGTTCTTACCAGCTGATGAATCACATCTTCCTTCTTGATATGGATTGTATTTGCCATTTGCTTTCTAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2379732 77 + 4274983 TGACTC-TAAGGTTCTTACCAGCTGATGAATCACATCTTCCTTCTTGATATGGATTGTATTTGCCATTTGCTTTCTAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28591881 77 + 49145316 TGACTC-TAAGGTTCTTACCAGCTGATGGATCACATCTTCCTTCTTGATTTGGATTGTATTTACCATTTGCTTTCTAT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1647656 77 - 2680843 TGACTC-TAAGGTTCTTACCAGCTGATGGATCACATCTTCCTTCTTGATTTGGATTGTATTTGCCATTTGCTTTCTAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 394501 77 - 4471408 TGACTC-TAAGGTTCTTACCAGCTGATGGATCACATCTTCCTTCTTGATTTGGATTGTATTTGCCATTTGCTTTCTAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3988752 78 - 30143674 TGACTTTTAAGGTTCTTACCAGCTGATACGTCTCATCTTTTTTCTTGATTTGGATTATATTCGCCATTTGCTTTCCAT i micMur3.chr22 I 30 C 0 s proCoq1.NW_012149263v1 603224 78 + 2501019 TGACTTTTAAGGTTCTTACCAGCTGATCTGTCTCCTCTTTTTTCTTGATTTGGATTGTATTTGCCATTTGCTTTCCAT i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4647669 59 - 122678785 TGACTA----------TCCCA---------TCTCATTTTCCTTCTTGATTTGGGGTGTATTTGCTGTTTGCTTTCTGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 383835 75 + 643850 TGGCCC-CATGTTTCTTGCCAGCTATTTCATT-CGAATTCTTCCTCTGTTCAAGTTGTAATTGCCCTTT-CTTTCTAC i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131162 466 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=349089.000000 s hg38.chr19_GL383574v1_alt 114220 28 + 155864 CCCTACACCTCGATTTAGACTTTGTACC s panTro5.chr19 36181850 28 + 61309027 CCCTACACCTCAATTGAGACTTTGTACC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39926095 28 + 64411610 CCCTACACCTCAATTGAGACTTTGTACC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6337790 28 - 8369475 CCCTACACCTCGATTTAGACTTTGTACC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63936089 28 - 106955855 CCCTACACCTTGATTTAGATTTTGTACC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30250925 28 + 53671032 GCCTATACCTTGATTTAGACTTTGTACC i rheMac8.chr19 C 0 I 1 s macFas5.chr19 34704834 28 + 59248254 GCCTATACCTTGATTTAGACTTTGTACC i macFas5.chr19 C 0 I 1 s macNem1.NW_012011689v1 4576945 28 - 13342542 GCCTATACCTTGATTTAGACTTTGTGCC i macNem1.NW_012011689v1 C 0 I 1 s cerAty1.NW_012005268v1 5501396 28 + 7714307 GCCTACACCTTGATTTAGACTTTGTACC i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29305395 28 + 50890351 GCCTACACCTTAATTTAGACTTTGTACC i chlSab2.chr6 C 0 I 1 s manLeu1.NW_012102454v1 937645 28 - 2385121 GCCTACACCTTGATTTAGACTTTGTACC i manLeu1.NW_012102454v1 C 0 I 1 s colAng1.NW_012111697v1 2379809 28 + 4274983 GCCTACACCTTGATTTAGACTTTGTACC i colAng1.NW_012111697v1 C 0 I 1 s calJac3.chr22 28591958 28 + 49145316 TACCACATCTTGATTTCGACTTTGTACC i calJac3.chr22 C 0 I 311 s cebCap1.NW_016107633v1 1647733 28 - 2680843 TACCACATCTTGATTTCGACTTTGTACA i cebCap1.NW_016107633v1 C 0 I 1 s aotNan1.NW_018505377v1 394578 28 - 4471408 TACCACATCTTGATTTCAACTTTGTACC i aotNan1.NW_018505377v1 C 0 I 1 s micMur3.chr22 3988830 27 - 30143674 -CCTACGTGTTGATTTAGACTTTGTACC i micMur3.chr22 C 0 I 11 s proCoq1.NW_012149263v1 603302 28 + 2501019 CCCTACATGTCGATTTAGACTTCGTACC i proCoq1.NW_012149263v1 C 0 I 6 s mm10.chr7 111131628 27 - 145441459 CCCTATACCTTGATT-AGATTTTGCATC i mm10.chr7 I 466 I 1 s canFam3.chr1 4647728 28 - 122678785 CCCTATACTTTGATTTAAACTTTGTGTC i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 383910 28 + 643850 CCGTGCACCTTGATTTAAACTTTGTACT i dasNov3.JH563638 C 0 I 8 e otoGar3.GL873654 5516290 3 + 5549422 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=1377005.000000 s hg38.chr19_GL383574v1_alt 114248 120 + 155864 TTTTCTTAAGGGATTTCAGGCTTAACGTGGTCCTACTCTGGATGTGAAAGAGGAGACCCAGTGAATTTACTCAAGAattgagttagctcacatttatggagtacctacagtacagcccag s panTro5.chr19 36181878 120 + 61309027 TTTTCTTAAGGGATTTCAGGCTTAACGTGGTCCTACTCTGGATGTGAAAGAGGAGACCCAGTGAATTTACTCAAGAattgagttagctcacatttatggagtacctacagtacagtccag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39926123 120 + 64411610 TTTTCTTAAGGGATTTCAGGCTTAACGTGGTCCTACTCTGGATGTGAAAGAGGAGACCCAGTGAATTTACTCAAGAattgagttagctcacatttatggagtacctacagtacagtccag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6337818 120 - 8369475 TTTTCTTAAGGGATTTCAGGCTTAACGTGGTCCTACTCTGGATGTGAAAGAGGAGACCCAGTGAATTTACTCAAGAattgagttagctcacatttatggagtacctacagtacagcccag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63936117 120 - 106955855 TTTTCTTAAGGGATTTCAGGCTTAATGTGGTCCTACTCTGGATGTGAAAGAGGAGACCCAGTGAATTTAGTCAAGAattgagttagctcacatttatggagtacctacagtatggcccag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30250954 117 + 53671032 TTTTCCTAAGGGATTTCAGAATTAACGTGGTCCTACTCTGGATGTGAAAGGA---ACCCAGTGAATTTAGTCATGAattgagttagctcacatttgtggagtacctacagtatggcccag i rheMac8.chr19 I 1 C 0 s macFas5.chr19 34704863 117 + 59248254 TTTTCCTAAGGGATTTCAGAATTAACGTGGTCCTACTCTGGATGTGAAAGGA---ACCCAGTGAATTTAGTCATGAATTGAGTTAGCTCACATTTGTGGAGTACCTACAGTATGGCCCAG i macFas5.chr19 I 1 C 0 s macNem1.NW_012011689v1 4576974 117 - 13342542 TTTTCCTAAGGGATTTCAGAATTAACGTGGTCCTACTCTGGATGTGAAAGGA---ACCCAGTGAATTTAGTCATGAATTGAGTTAGCTCACATTTGTGGAGTACCTACAGTATGGCCCAG i macNem1.NW_012011689v1 I 1 C 0 s cerAty1.NW_012005268v1 5501425 117 + 7714307 TTTTCCTAAGGGATTTCAGAGTTAACGTGGTCCTACTCTGGATGTGAAAGGA---ACCCAGTGAATTTAGTCATGAATTGAGTTAGCTCACATTTGTGGAGTACCTACAGTATGGCCCAG i cerAty1.NW_012005268v1 I 1 C 0 s chlSab2.chr6 29305424 116 + 50890351 TTTTCCTAAGGGATTTCAGAATTAACGTGGTCCTACTCTGGATGTGAAAGGA---ACCCAGTGAATTTAGTCATGAATTGAGTTAGCTCACATTTGTGGAGTACCTACAGTATGGCCC-G i chlSab2.chr6 I 1 C 0 s manLeu1.NW_012102454v1 937674 117 - 2385121 TTTTCCTAAGGGATTTCAGAATTAACGTGGTCCTACTCTGGATGTGAAAGGA---ATCCAGTGAATTTAGTCATGAattgagttagctcacatttgtggagtacctacagtatggcccag i manLeu1.NW_012102454v1 I 1 C 0 s colAng1.NW_012111697v1 2379838 118 + 4274983 TTTTCCTAAGGGATTTCAGAATTAACGTGATCCTACCCTGGATGTGAAAGGA--GACCCAGTGAATTTAGTCATGAATTGAGTTAGCTCACATTTGTGGAGTACCTACAGTACGGCCCAG i colAng1.NW_012111697v1 I 1 C 0 s calJac3.chr22 28592297 115 + 49145316 TTTTCTTAAGGGATTTCAGATTTAATGTGGTCCTACTCTGGATGTGAAA-AGGAG----AGTGAATTGAGTCattaattgagttagctcacatttacggagtacctacagtatggaccag i calJac3.chr22 I 311 C 0 s cebCap1.NW_016107633v1 1647762 116 - 2680843 TTTTCTTAAGGGATTTCAGATTTAACGTGATCCTACTCTGGATGTGAAAGAGGAG----AGTGAATTGAGTCATTAATTGAATTAGCTCACATTTGTGGAGTACCTACAGTATGGACCAG i cebCap1.NW_016107633v1 I 1 C 0 s aotNan1.NW_018505377v1 394607 116 - 4471408 TTTTCTTAAGGGATTTCAGATTTAACGTGGTCCTACTCTGGATGTGAAAGAGGAG----AGTGAATTGAGTCattaattgaattagctcacatttatggagtacctacagtatggaccag i aotNan1.NW_018505377v1 I 1 C 0 s micMur3.chr22 3988868 116 - 30143674 TGTTGTTAAGGGACTTCAGACTTAATCTGGTCCTACTCTCGATGAGAAAGAGGAGACCCAGTGAATTTAGTCATGAATTG----AGCTCACATTTGTGGTGTCCTTACAGTACAGGCCAG i micMur3.chr22 I 11 I 54 s proCoq1.NW_012149263v1 603336 116 + 2501019 TTTTTTTAGGGAACTTCAGACTTAATCTGGTCCTACTCTCAATGAGAAAGAGGAGGCCCAATGAATTTAGTCATGAATTT----AGCTCACATTTGTGGTGTACTTACAGTACAGGCCAG i proCoq1.NW_012149263v1 I 6 I 54 s mm10.chr7 111131656 77 - 145441459 TTTTTCTCAGGGACTGT--------TCTAGTCCTACTCTAGTTAGGAAGAAAGTAACCCAGTGAATTTA------------GCTGGCTCACAGACAT----------------------- i mm10.chr7 I 1 C 0 s canFam3.chr1 4647757 118 - 122678785 TTGCTCTTAGGGACCTCAGACATAATCTGGTTCCACCCTAGATGAGAGATGA--GACTCAGTGATTTTATTCATTAGTTTAGTTAACTCACATTTATGGAGTACTCTCAGTATAGGCCAG i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 383946 114 + 643850 TTATTCTAAGAGATTTGAGACATAACCCAGTCTTACTCTGGATGAGAAAGATGAGACCCAGTGACTTTGGTCATGAATttcatcagtacacatttatgtagcacttacagtaag------ i dasNov3.JH563638 I 8 C 0 e otoGar3.GL873654 5516290 3 + 5549422 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=580754.000000 s hg38.chr19_GL383574v1_alt 114368 60 + 155864 ttactttactggaagatcagaatacagagctggacagcacaTCCT---GG-G-AAGAATGCCAAA s panTro5.chr19 36181998 60 + 61309027 ttactttactggaagatcagaatatagagctggacagcacaTCCT---GT-G-AAGAATGCCAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39926243 60 + 64411610 ttactttactggaagatcagaatatagagctggacagcacaTCCT---GG-G-AAGAATGCCAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6337938 60 - 8369475 ttactttactggaagatcagaatacagagctggacagcacaTCCT---GG-G-AAGAATGCCAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63936237 60 - 106955855 ttactttaccggaagatcagaatacagagctggacagcacaTCCT---GG-G-AAGAATGCCAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30251071 60 + 53671032 ttactttactggaagatcagaatacagagcctaacagcacaTCCT---GG-G-AAGAATGCCAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34704980 60 + 59248254 TTACTTTACTGGAAGATCAGAATACAGAGCCTAACTGCACATCCT---GG-G-AAGAATGCCAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4577091 60 - 13342542 TTACTTTACTGGAAGATCAGAATACAGAGCCTAACAGCACATCTT---GG-G-AAGAATGCCAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5501542 60 + 7714307 TTACTTTACTGGAAGATCAGAATACAGAGCCTAACAGCACATCCT---GG-G-AAGAATGCCAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29305540 60 + 50890351 TTACTTTACTGGAAGATCAGAATACAGAGCCTAACAGCACATCCT---GG-G-AAGAATGCCAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 937791 60 - 2385121 ttactttactggaagatcagaatacagagcctaacagcacaTCCT---GG-G-AAGAATGCCAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2379956 60 + 4274983 TTACTTTACTGTAAGATCAGAATACAGAGCCTAACAGCATATCCT---GG-G-AAGAATGCCAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28592412 60 + 49145316 ttactttactggaagatcagaatacagagtcgaatagcacagcct---gg-G-CTGAATGCCAAA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1647878 60 - 2680843 TTACTTTACTGGAAGATCAGAATAGAGAGTCCAATAGCACAGCCT---GG-G-ATGAATGCCAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 394723 58 - 4471408 ttactttactggagtatcagaatac--agtcgaatagcacagcct---gg-G-ATGAATGCCAAA i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111131733 44 - 145441459 CTACGCCATTGTTAGCTAAGAG--------------ACACAGCTT---GGAG-AAGACTGTC--- i mm10.chr7 C 0 C 0 s canFam3.chr1 4647875 61 - 122678785 TTACTATAGTGGAAAATTGAAATACAGAGCTAGAAGGTATAGCCT---GA-ACAAGAAGGCCAAA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 384060 63 + 643850 ttactgtactaaatgctagagatacagagctgaaaggcacagcctgtgGG-G-AAGAAAGCTAAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 603452 54 + 2501019 I e micMur3.chr22 3988984 54 - 30143674 I e otoGar3.GL873654 5516290 3 + 5549422 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=1654479.000000 s hg38.chr19_GL383574v1_alt 114428 123 + 155864 TAAGCAATTGTCATAAAGTATTATAAGTGCCTAGAAG-GGGAGTCACC-AAGTAACCTCTCCCAGGTTTcagagatcttgcgtgtct-----tatttactgctttgatctccagggcctagaacacagtg s panTro5.chr19 36182058 123 + 61309027 TAAGCAATTGTCATAAAGTATTATAAGTGCCTAGAAG-GGGAGTCACC-AAGTAACCACTCCCAGGTTTcagagatcttgcgtgtct-----tgtttactgctttgatctccagggcctagaacacagtg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39926303 123 + 64411610 TAAGCAATTGTCATAAAGTATTATAAGTGCCTAGAAG-GGGAGTCACC-AAGTAACCACTCCCAGGTTTcagaggtcttgcgtgtct-----tgtttactgctttgatctccagggcctagaacacagtg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6337998 123 - 8369475 TAAGTAATTGTCATAAAGTATTATAAGTGCCCAGAAG-GGGAGTCACC-AAGTAACCTCTCCCAGGTTTcagagatcttgcgtgtct-----tgtttactgctttgatctccagggcctagaacacagtg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63936297 123 - 106955855 TAAGCAATTGTCAAAAAGTATTATAAGTGCCTAGAAA-GGGAGACACC-AAGTAACCTCTCCCAGGTTTcagagatcttgcgtgtct-----tgttcactgctttgatctccagggcctagaacacagtg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30251131 123 + 53671032 TAAGCAATTGTCATAAAGTATCATAAGCGCCTAGAAG-GGGAGACACC-AAGTAACCTCTCCCAGTTTTcagagatcttgcatatct-----tgttcactgctttgatctccagggcctagaacacagtg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34705040 123 + 59248254 TAAGCAATTGTCATAAAGTATCATAAGCGCCTAGAAG-GGGAGACACC-AAGTAACCTCTCCCAGTTTTcagagatcttgcgtatct-----tgttcactgctttgatctccagggcctagaacacagtg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4577151 123 - 13342542 TAAGCAATTGTCATAAAGTATCATAAGCGCCTAGAAG-GGGAGACACC-AAGTAACCTCTCCCAGTTTTcagagatcttgcgtatct-----tgttcactgctttgatctccagggcctagaacacagtg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5501602 123 + 7714307 TAAGCAATTGTCATAAAGTATCATAAGTGCCTAGAAG-GGGAGACACC-AAGTAACCTCTCCCAGTTTTcagagatctttcctgtct-----tgttcactgctttgatctccagggcctagaacacagtg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29305600 123 + 50890351 TAAGCAATTGTCCTAAAGTATCATAAGTGCCTAGAAG-GGGAGACACC-AAGTAACCTCTCCCAGTTTTcagagatcttgcgtgtct-----tgttcactgctttgatctccagggcctagaacacagtg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 937851 123 - 2385121 TAAGCAATTGTCATAAAGTATCATAAGTGCCTAGAAG-GGGAGACACC-AAGTAACCTCTCCCAGTTTTcagagatcttgcctgtct-----tgttcactgctttgatctccagggcgtagaacacagtg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2380016 123 + 4274983 TAAGCAATTGTCATAAAGTATCATAAGTACCTAGAAG-GGGAGACACC-AAGTAACCTCTCCCAGTTTTcagagatcttgtgtgtct-----tgttcactgctttgatctccagggcttagaatacagtg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28592472 123 + 49145316 TAAGCAATTGTCATAAAGTATTACAAATCCCTAGAAG-GGGAGACACC-AAGTAGCCTCTCCCAGGTTTcagagatcttgagtgtct-----tggtcactgctttgatctccagggcccagaacacagtg i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1647938 123 - 2680843 TAAGCAATTGTCATAAAGTATTAGAAGTCCCTAGAAG-GGGAGACACC-AAGTAGCCTCTCCCAGGTTTcagagattttgagtgtct-----tggtcactgctttgatctccagggcccagaacacagtg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 394781 123 - 4471408 TAAGCAATTGTCGTAAAGTATTACAAGTCCCTAGAAG-GGGAGACACC-AAGTAGCCTCTCCTAGGTTTcagagatcttgagtgtct-----tggtcactgctttgatctccagggcccagaacacagtg i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3989038 123 - 30143674 TAAGCCATTGCCATAAAGTATCATAAGTGCCTAGGAG-GGGAGACACC-AAAGGAGCTCTGCCAGCTTTcagggatcttgcctgtct-----tattaactgctttgggctccagggtctggaacgcagtg i micMur3.chr22 I 54 I 15 s proCoq1.NW_012149263v1 603506 123 + 2501019 TAAGCAATTGCCAGAAAGTATCGTAAGTGCCTAGGAG-GGGAGACACC-AAAtgagctctgccaggtttcaaggatcttgcctgtca-----tgttgactgctttgggctccagggcctggaacacggtg i proCoq1.NW_012149263v1 I 54 I 15 s mm10.chr7 111131777 111 - 145441459 -----------TATGAAGTGTCTAAAGTACCTAGA---GAGAGACACCAAAAAAAGTTGTGCAAGGTTTcagaaattttgcctgttt-----tgttcattgtgtttatcatcggggtctagaacatactg i mm10.chr7 C 0 I 1 s canFam3.chr1 4647936 128 - 122678785 TAAGCAATTGCCACAAAGTATCATAAATGCCTAGAAGTGGGGGACACT-TAAtgagctccgccaggtttcagagatcttgcctgttgatgaatgtt-gttgctgttatctccaggacctggaacacagtg i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 384123 122 + 643850 TAAGCAATTGCCGTAAAGTCTTTTAAGTGCCTAGAAGGGGGAGACTCT-AGATATACTCTGCCAGGTTTcagagatcttgctcatct-----tcttcactgctgt-atctccaaggccaagaaca-agtg i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5516290 3 + 5549422 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=3070.000000 s hg38.chr19_GL383574v1_alt 114551 3 + 155864 --cgt s panTro5.chr19 36182181 3 + 61309027 --cat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39926426 3 + 64411610 --cat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6338121 3 - 8369475 --cgt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63936420 3 - 106955855 --cgt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30251254 3 + 53671032 --cgt i rheMac8.chr19 C 0 I 4 s macFas5.chr19 34705163 3 + 59248254 --cgt i macFas5.chr19 C 0 I 1 s macNem1.NW_012011689v1 4577274 3 - 13342542 --cgt i macNem1.NW_012011689v1 C 0 I 4 s cerAty1.NW_012005268v1 5501725 3 + 7714307 --cat i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29305723 3 + 50890351 --cgt i chlSab2.chr6 C 0 I 1 s manLeu1.NW_012102454v1 937974 3 - 2385121 --cat i manLeu1.NW_012102454v1 C 0 I 1 s colAng1.NW_012111697v1 2380139 3 + 4274983 --cgt i colAng1.NW_012111697v1 C 0 I 1 s calJac3.chr22 28592595 3 + 49145316 --tcc i calJac3.chr22 C 0 I 1 s cebCap1.NW_016107633v1 1648061 3 - 2680843 --tcc i cebCap1.NW_016107633v1 C 0 I 1 s aotNan1.NW_018505377v1 394904 3 - 4471408 --tcc i aotNan1.NW_018505377v1 C 0 I 1 s canFam3.chr1 4648065 3 - 122678785 --cct i canFam3.chr1 I 1 I 1 s dasNov3.JH563638 384245 3 + 643850 ttc-- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 603629 15 + 2501019 I e micMur3.chr22 3989161 15 - 30143674 I e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131888 1 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=15070.000000 s hg38.chr19_GL383574v1_alt 114554 4 + 155864 ggAA--- s panTro5.chr19 36182184 4 + 61309027 ggAA--- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39926429 4 + 64411610 ggAA--- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6338124 4 - 8369475 ggAA--- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63936423 4 - 106955855 ggaa--- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34705167 3 + 59248254 aga---- i macFas5.chr19 I 1 C 0 s cerAty1.NW_012005268v1 5501729 4 + 7714307 ggaa--- i cerAty1.NW_012005268v1 I 1 C 0 s chlSab2.chr6 29305727 4 + 50890351 ggaa--- i chlSab2.chr6 I 1 C 0 s manLeu1.NW_012102454v1 937978 4 - 2385121 ggaa--- i manLeu1.NW_012102454v1 I 1 C 0 s colAng1.NW_012111697v1 2380143 4 + 4274983 ggaa--- i colAng1.NW_012111697v1 I 1 C 0 s calJac3.chr22 28592599 4 + 49145316 ggaa--- i calJac3.chr22 I 1 C 0 s cebCap1.NW_016107633v1 1648065 4 - 2680843 ggaa--- i cebCap1.NW_016107633v1 I 1 C 0 s aotNan1.NW_018505377v1 394908 4 - 4471408 ggaa--- i aotNan1.NW_018505377v1 I 1 C 0 s canFam3.chr1 4648069 3 - 122678785 gga---- i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 384248 5 + 643850 --aataa i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 603629 15 + 2501019 I e micMur3.chr22 3989161 15 - 30143674 I e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131888 1 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M e macNem1.NW_012011689v1 4577277 4 - 13342542 I e rheMac8.chr19 30251257 4 + 53671032 I a score=13643.000000 s hg38.chr19_GL383574v1_alt 114558 2 + 155864 AT s panTro5.chr19 36182188 2 + 61309027 AT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39926433 2 + 64411610 AT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6338128 2 - 8369475 AT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63936427 2 - 106955855 at i nomLeu3.chr10 C 0 C 0 s cerAty1.NW_012005268v1 5501733 2 + 7714307 at i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29305731 2 + 50890351 at i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 937982 2 - 2385121 at i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2380147 2 + 4274983 at i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28592603 2 + 49145316 at i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1648069 2 - 2680843 at i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 394912 2 - 4471408 at i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4648072 2 - 122678785 ac i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 384253 2 + 643850 ac i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 603629 15 + 2501019 I e micMur3.chr22 3989161 15 - 30143674 I e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131888 1 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M e macNem1.NW_012011689v1 4577277 4 - 13342542 I e macFas5.chr19 34705170 0 + 59248254 C e rheMac8.chr19 30251257 4 + 53671032 I a score=7800.000000 s hg38.chr19_GL383574v1_alt 114560 1 + 155864 G s panTro5.chr19 36182190 1 + 61309027 G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39926435 1 + 64411610 G i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6338130 1 - 8369475 G i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63936429 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s cerAty1.NW_012005268v1 5501735 1 + 7714307 g i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29305733 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 937984 1 - 2385121 g i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2380149 1 + 4274983 g i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28592605 1 + 49145316 g i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1648071 1 - 2680843 g i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 394914 1 - 4471408 g i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4648074 1 - 122678785 g i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 603629 15 + 2501019 I e micMur3.chr22 3989161 15 - 30143674 I e dasNov3.JH563638 384255 0 + 643850 C e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131888 1 - 145441459 I e saiBol1.JH378197 5436411 2501 + 8899380 M e macNem1.NW_012011689v1 4577277 4 - 13342542 I e macFas5.chr19 34705170 0 + 59248254 C e rheMac8.chr19 30251257 4 + 53671032 I a score=526212.000000 s hg38.chr19_GL383574v1_alt 114561 977 + 155864 ATGAAGTtttt-tttgtttgtttgtttgtttgtttTGTATTTCATTCAGTTTAATGAGGGGACATGAGGAGCCAGGGGCAGAAtgatatggttaggctgtgtcctcacccaaatctcatcttgaattgtagttcccataatccccacatgtggtgggaaggacctaatgggaggtaatttaatcatatgagcagtttcccccatgctatgcttgtgatagtgagcaacttctcacaagatctgatggctttataaggggcttcccccttcacttgggtctcattcttcttgctgctgccatgtgaagaaggacgtgtttgcttccccttctgccatgaatatgttttctgaggcctcccagccctggggaactgtgaatcaattaagcctctttcctttataaattacctagtcttgggcatttccccatagcagggtgagaacagactaataAACcttattttaagaaattgccacagccaccccaacctttagcacccac-actctgatcaattagcagccatcaacatcacggcaagaccctctgccaacaaaaagtttaccacttgctgaagatgcagatgatcattagcattttttagtaatgaagtatttttaaattaaggtatgtgcattgtttttgtgaca--atgcgattgcatacttaacagactacaatatagtgtaaatataacttttatatgtacaggaaaataaaaaacatcatgtgacttgcttcattgcgatattcactttcttgaaatgatctggaatgacacctgcaatatctccaagataagcctataatatcttttcctgataattttggctatatacttcttgatcaccttttctatgacaaggatttggtaatatcattttttTAtttttattttattattat---actttaagttttagggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccatgctggtgtgctg s panTro5.chr19 36182191 979 + 61309027 ATAAAgttttt-ttt--ttgtttgtttgtttgttttgtatt-CATTCAGTTTAATGAGGGGACATGAGGAGCCAGGGGCAGAAtgatatggttaggctgtgtcctcacccaaatctcatcttgaattgtagttcccataatccccacatgtggtgggaaggacctaatgggaggtaatttaatcatacgagcagtttcccccatgctatgcttgtgatagtgagcaacttctcacaagatctgatggctttataaggggcttcccccttcacttgggtctcattcttcttgctgctgccatgtgaagaaggac-tgtttgcttccccttctgccatgaatatgttttctgaggcctcccagccctggggaactgtgaatcaattaagcctctttcctttatacattacctagtcttgggcatttccccatagcagggtgagaacagactaataAACcttattttaagaaattgccacagccaccccaacctttagcacccaccactctgatcaattagcagccatcaacatcacggcaagaccctctgccaacgaaaagtttaccacttgctgaagatgcagatgatcattagcattttttagtaatgaagtatttttaaattaaggtatgtgcattgtttttgtgacataatgcgattgcatacttaacagactacaatatagtgtaaacataacttttatatgtacagaaaagtaaaaaacatcatgtgacttgcttcattgcaatattcactttcttgaaatgatctggaatgacacctgcaatatctccaagataagcctataatatcttttcctgataattttggctgtatacttcttgatcaccttttctatgacaaggatttggtaatatcattttttTATTTTTAttttattattattatactttaagttttagggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccatgctggtgcgctg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39926436 981 + 64411610 ATGAAGTTtttgtttgtttgtttgtttgtttgtttTGTATT-CATTCAGTTTAATGAGGGGACATGAGGAGCCAGGGGCAGAAtgatatggttaggctgtgtcctcacccaaatctcatcttgaattgtagttcccataatccccacatgtggtgggaaggacctaatgggaggtaatttaatcatacgagcagtttcccccatgctatgcttgtgatagtgagcaacttctcacaagatctgatggctttataaggggcttcccccttcacttgggtctcattcttcttgctgctgccatgtgaagaaggac-tgtttgcttccccttctgccgtgaatatgttttctgaggcctcccagccctggggaactgtgaatcaattaagcctctttcctttatacattacctagtcttgggcatttccccatagcagggtgagaacagactaataAACcttattttaagaaattgccacagccaccccaacctttagcacccaccactctgatcaattagcagccatcaacatcatggcaagaccctctgccaacgaaaagtttaccacttgctgaagatgcagatgatcattagcattttttagtaatgaagtatttttaaattaaggtatgtgcattgtttttgtgacataatgcgattgcatacttaacagactacaatatagtgtaaacataacttttatatgtacaggaaaat-aaaaacatcatgtgacttgcttcattgcaatattcactttcttgaaatgatctggaatgacacctgcaatatctccaagataagcctataatatcttttcctgataattttggctgtatacttcttgatcaccttttctatgacaaggatttggtaatatcattttttaATTTTTAttttattattattatactttaagttttagggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccatgctggtgcgctg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6338131 975 - 8369475 ATGAAgttttt-------tgtttgtttgtttgtttTGTATTTCATTCAGTTTAATGAGGGGACATGAGGAGCCAGGGGCAGAAtgatatggttaggctgtgtcctcaccgaaatctcatcttgaattgtagttcccataatccccacatgtggtgggaaggacctaatgggaggtaatttaatcatatgagcagtttcccgcatgctatgcttgtgatagtgagtaacttctcacaagatctgatggctttataaggggcttcccccttcacttgggtctcattcttcttgctgctgccatgtgaagaagacg-tgtttgcttccccttctgccatgaatatgttttctgaggcctcccagccctggggaactgtgaatcaattaagcctctttcctttataaattacctagtcttgggcatttccccatagtagagtgagaacagactaataAACcttattttaagaaattgccacagccaccccaacctttagcacccaccactctgatcaattagcagccatcaacatcacggcgagaccctctgccaacaaaaagtttaccacttgctgaagatgcagatgatcattagcattttttagtaatgaagtatttttaaattaaggtatgtgcattgtttttgtgacataatgcgattgcatacttaacagactacagtatagtgtaaacataacttttgtatgtacaggaaaataaaaaacatcatgtgacttgcttcattgcaatattcgctttcttgaaatgatctggaatgacacctgcaatatctccaagataagcctataatatcttttcctgataattttggctatatacttcttgatcaccttttctatgacaaggatttggtaatatc-tttttttatTTTTAttttattattattatactttaagttttagggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccatgctggtgtgctg i gorGor5.CYUI01015150v1 C 0 C 0 e proCoq1.NW_012149263v1 603629 15 + 2501019 I e micMur3.chr22 3989161 15 - 30143674 I e dasNov3.JH563638 384255 0 + 643850 C e otoGar3.GL873654 5516290 3 + 5549422 I e mm10.chr7 111131888 1 - 145441459 I e chlSab2.chr6 29305734 0 + 50890351 C e canFam3.chr1 4648075 0 - 122678785 C e aotNan1.NW_018505377v1 394915 0 - 4471408 C e cebCap1.NW_016107633v1 1648072 0 - 2680843 C e saiBol1.JH378197 5436411 2501 + 8899380 M e calJac3.chr22 28592606 0 + 49145316 C e colAng1.NW_012111697v1 2380150 0 + 4274983 C e manLeu1.NW_012102454v1 937985 0 - 2385121 C e cerAty1.NW_012005268v1 5501736 0 + 7714307 C e macNem1.NW_012011689v1 4577277 4 - 13342542 I e macFas5.chr19 34705170 0 + 59248254 C e rheMac8.chr19 30251257 4 + 53671032 I e nomLeu3.chr10 63936430 0 - 106955855 C a score=9743.000000 s hg38.chr19_GL383574v1_alt 115538 17 + 155864 cacccactaactcgtcg s panTro5.chr19 36183170 17 + 61309027 cacccactaacttgtcg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39927417 17 + 64411610 cacccactaacttgtcg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6339106 17 - 8369475 cacccattaactcgtcg i gorGor5.CYUI01015150v1 C 0 C 0 s otoGar3.GL873654 5516293 17 + 5549422 CACTCCCTCACCCCTAC i otoGar3.GL873654 I 3 C 0 e proCoq1.NW_012149263v1 603629 15 + 2501019 I e micMur3.chr22 3989161 15 - 30143674 I e dasNov3.JH563638 384255 0 + 643850 C e mm10.chr7 111131888 1 - 145441459 I e chlSab2.chr6 29305734 0 + 50890351 C e canFam3.chr1 4648075 0 - 122678785 C e aotNan1.NW_018505377v1 394915 0 - 4471408 C e cebCap1.NW_016107633v1 1648072 0 - 2680843 C e saiBol1.JH378197 5436411 2501 + 8899380 M e calJac3.chr22 28592606 0 + 49145316 C e colAng1.NW_012111697v1 2380150 0 + 4274983 C e manLeu1.NW_012102454v1 937985 0 - 2385121 C e cerAty1.NW_012005268v1 5501736 0 + 7714307 C e macNem1.NW_012011689v1 4577277 4 - 13342542 I e macFas5.chr19 34705170 0 + 59248254 C e rheMac8.chr19 30251257 4 + 53671032 I e nomLeu3.chr10 63936430 0 - 106955855 C a score=5893.000000 s hg38.chr19_GL383574v1_alt 115555 9 + 155864 tttagcatt s panTro5.chr19 36183187 9 + 61309027 tttagcatt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39927434 9 + 64411610 tttagcatt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6339123 9 - 8369475 tttagcatt i gorGor5.CYUI01015150v1 C 0 C 0 s otoGar3.GL873654 5516310 9 + 5549422 CTTAACTTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111131889 9 - 145441459 tctggaaac i mm10.chr7 I 1 C 0 e proCoq1.NW_012149263v1 603629 15 + 2501019 I e micMur3.chr22 3989161 15 - 30143674 I e dasNov3.JH563638 384255 0 + 643850 C e chlSab2.chr6 29305734 0 + 50890351 C e canFam3.chr1 4648075 0 - 122678785 C e aotNan1.NW_018505377v1 394915 0 - 4471408 C e cebCap1.NW_016107633v1 1648072 0 - 2680843 C e saiBol1.JH378197 5436411 2501 + 8899380 M e calJac3.chr22 28592606 0 + 49145316 C e colAng1.NW_012111697v1 2380150 0 + 4274983 C e manLeu1.NW_012102454v1 937985 0 - 2385121 C e cerAty1.NW_012005268v1 5501736 0 + 7714307 C e macNem1.NW_012011689v1 4577277 4 - 13342542 I e macFas5.chr19 34705170 0 + 59248254 C e rheMac8.chr19 30251257 4 + 53671032 I e nomLeu3.chr10 63936430 0 - 106955855 C a score=3276.000000 s hg38.chr19_GL383574v1_alt 115564 1 + 155864 a s panTro5.chr19 36183196 1 + 61309027 a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39927443 1 + 64411610 a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6339132 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30251261 1 + 53671032 a i rheMac8.chr19 I 4 C 0 s macFas5.chr19 34705170 1 + 59248254 a i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4577281 1 - 13342542 a i macNem1.NW_012011689v1 I 4 C 0 s mm10.chr7 111131898 1 - 145441459 a i mm10.chr7 C 0 C 0 s dasNov3.JH563638 384255 1 + 643850 a i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 603629 15 + 2501019 I e micMur3.chr22 3989161 15 - 30143674 I e otoGar3.GL873654 5516319 0 + 5549422 C e chlSab2.chr6 29305734 0 + 50890351 C e canFam3.chr1 4648075 0 - 122678785 C e aotNan1.NW_018505377v1 394915 0 - 4471408 C e cebCap1.NW_016107633v1 1648072 0 - 2680843 C e saiBol1.JH378197 5436411 2501 + 8899380 M e calJac3.chr22 28592606 0 + 49145316 C e colAng1.NW_012111697v1 2380150 0 + 4274983 C e manLeu1.NW_012102454v1 937985 0 - 2385121 C e cerAty1.NW_012005268v1 5501736 0 + 7714307 C e nomLeu3.chr10 63936430 0 - 106955855 C a score=33845.000000 s hg38.chr19_GL383574v1_alt 115565 3 + 155864 ATG s panTro5.chr19 36183197 3 + 61309027 ATG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39927444 3 + 64411610 ATG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6339133 3 - 8369475 ATG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63936430 3 - 106955855 atg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30251262 3 + 53671032 atg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34705171 3 + 59248254 atg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4577282 3 - 13342542 atg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5501736 3 + 7714307 atg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29305734 3 + 50890351 atg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 937985 3 - 2385121 atg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2380150 3 + 4274983 atg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28592606 3 + 49145316 atg i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1648072 3 - 2680843 atg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 394915 3 - 4471408 atg i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5516319 2 + 5549422 -TG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111131899 1 - 145441459 --g i mm10.chr7 C 0 I 2 s canFam3.chr1 4648075 3 - 122678785 atc i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 384256 3 + 643850 att i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 603629 15 + 2501019 I e micMur3.chr22 3989161 15 - 30143674 I e saiBol1.JH378197 5436411 2501 + 8899380 M a score=929614.000000 s hg38.chr19_GL383574v1_alt 115568 70 + 155864 AAGTATTTGTTGAAGGAATGAATGATCATCTGAGAATGAAAT--CAGAAAA-AATGTCAT-ACACATTAGCTAT s panTro5.chr19 36183200 70 + 61309027 AAGTATTTGTTGAAGGAATGAATGATCATCTGAGAATGAAAT--CAGAAAA-AATGTCAT-ACACATTAGCTAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39927447 70 + 64411610 AAGTATTTGTTGAAGGAATGAATGATCATCTGAGAATGAAAT--CAGAAAA-AATGTCAT-ACACATTGGCTAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6339136 70 - 8369475 AAGTATTTGTTGAAGGAATGAATGATCATCTGAGAATGAAAT--CAGAAAA-AATGTTAT-ACACATTAGCTAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63936433 66 - 106955855 aagtatttgttgaaggaatgaatGATCATCTGAGAATGAAAT--CAGAATA-AATGTTAT-ACACATTAG---- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30251265 70 + 53671032 aagtatttgttgaaggaatgaatGATCATCTGAGAATGACAT--CAGAATA-AATGTTAC-ACATATTAGCTAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34705174 70 + 59248254 aagtatttgttgaaggaatgaatGATCATCTGAGAATGACAT--CAGAATA-AATGTTAC-ACATATTAGCTAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4577285 70 - 13342542 aagtatttgttgaaggaatgaatGATCATCTGAGAATGACAT--CAGAATA-AATGTTAC-ACATATTAGCTAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5501739 70 + 7714307 aagtatttgttgaaggaatgaatGATCGTCTGAGAATGACAT--CAGAATA-AATGTTAC-ACATATTAGCTAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29305737 67 + 50890351 aagtatttgttgaaggaatgaatGATCATCTGAGAATGA-----CAGAATA-AATGTTAC-ACATATTAGCTAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 937988 70 - 2385121 aagtatttgttgacggaatgaatGATCGTCTGAGAATGACAT--CAGAATA-AATGTTAC-ACATATTAGCTAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2380153 70 + 4274983 aagtatttgttgaaggaatgaatGATCATCTGAGAATGACAT--CAGAATA-AATGTTAC-ACATATTAGCTAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28592609 70 + 49145316 aagtatttgttgaaggaatgaatGATCATCTGAGAATGAAAT---AGAATA-AATGTTACAACACATTAGCTAT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1648075 70 - 2680843 aagtatttgttgaaggaatgaatGATCATCTGAGAATGAAAT---AGAATA-AATGTTACAACACATTAGCTAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 394918 70 - 4471408 aagtatttgttgaaggaatgaatGATCATCTGAGAATGAAAT---AGAATA-AATGTTTTAACAAGTTAGCTAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3989176 70 - 30143674 aagtatttgttgaatgaatgaatGATCATCTGAAAATGAAAT--CAGAATA-AATGGTAC-ACAAATCAGCTAT i micMur3.chr22 I 15 C 0 s proCoq1.NW_012149263v1 603644 70 + 2501019 aagtatttgttgaatgaatgaatGATCATCTGAAAATGAAAT--CAGAATA-AATGGTAC-ACGAATCAGCTAT i proCoq1.NW_012149263v1 I 15 C 0 s otoGar3.GL873654 5516321 68 + 5549422 AAGGGCTTA--GAACATATGCATGATCATCTGAAAATGAAAT--CAGAATA-CCTGGCAT-GTAAATTGGCTAT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111131902 63 - 145441459 gagaatttgttga----ataaatgaCCATCAGAGaataaaataaaaaaata-aat------aCAAATTTGCTAT i mm10.chr7 I 2 C 0 s canFam3.chr1 4648078 56 - 122678785 aagtatttgttgaatgaatCAGTGATCATCTGAGAATGAAAT--GAGAAAAGAGCGGT---------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 384259 70 + 643850 aaatatttgttgaattaatgaGCAATCATCTGAGAATGAACT--CAGAATA-AAAGTTAC-ACAAATTAGCAAT i dasNov3.JH563638 C 0 C 0 e saiBol1.JH378197 5436411 2501 + 8899380 M a score=368397.000000 s hg38.chr19_GL383574v1_alt 115638 23 + 155864 CTATAGAAAAGAT------A-TAAGTCAAA s panTro5.chr19 36183270 23 + 61309027 CTATAGAAAAGAT------A-TAAGTCAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39927517 23 + 64411610 CTATAGAAAAGAT------A-TAAGTCAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6339206 23 - 8369475 CTATAGAAAAGGT------A-TAAGTCAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63936499 23 - 106955855 CTATAGAAAAGAT------G-TAAGTCAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30251335 23 + 53671032 CTATAGAAAAGAT------A-TAAGTCGAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34705244 23 + 59248254 CTATAGAAAAGAT------A-TAAGTCGAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4577355 23 - 13342542 CTATAGAAAAGAT------A-TAAGTCGAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5501809 23 + 7714307 CTATAGAAAAGAT------A-TAAGTCGAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29305804 23 + 50890351 CTATAGAAAAGAT------A-TAAGTCGAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 938058 23 - 2385121 CTATAGAAAAGAT------A-TAAGTCGAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2380223 23 + 4274983 CTATAGAAAAGAT------A-TAAGTCGAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28592679 24 + 49145316 CCACAGAAAAGAT------ATTAAGTCAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5439003 24 + 8899380 ccACAGAAAAGAT------ATTAAGTCAAA i saiBol1.JH378197 M 2501 C 0 s cebCap1.NW_016107633v1 1648145 24 - 2680843 CCACAGAAAAGAT------ATTAAGTCAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 394988 24 - 4471408 CCACAGAAAAGAT------ACTAAGTCAAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3989246 23 - 30143674 CTATAGAAAAGAT------A-TAAGCCAAG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 603714 23 + 2501019 CTATAGAAAAGAT------A-AAAGCCAAG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5516389 23 + 5549422 CTATAGAAAAGAT------A-AAAGCCaaa i otoGar3.GL873654 C 0 I 869 s mm10.chr7 111131965 29 - 145441459 CTATAGAGGAGATGCAGACA-TAAGCCAAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4648134 23 - 122678785 CTATAGAAAAGAT------A-TAAACCAAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 384329 23 + 643850 CTGTAGAAAAGAT------A-GAAGCTAAG i dasNov3.JH563638 C 0 C 0 a score=9010633.000000 s hg38.chr19_GL383574v1_alt 115661 580 + 155864 AGATATTTCGTAAATGTAGTTTGAAGAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTATAACCCC-AGGAAGGCATGCATGGAATGTGTTTGTAGCTGGAAAGCTTAAACTTAATTTTGTATCCTCAGAAGAAATACTTGTGTTTCT---GGGAGAGGATTGGGACAGTGTC--TGGAAATTGGGGTGGCGGGTCCAAGAGAG--GAATTACGTG--GTGTGTGTGTAGCACTCTCTGGGGG--CC-TGACCA-GAGGAGCA----GTGCAGCGTTCCCTCCACAAAGCCATCTGCACTAACACACAGATGGGCGTGTCCCTGTTGTTGCCTCTGGCTGCAAGGGTCTCTCCCTT--GCTTAGCGTCT---GTCCTCCCAGTACCATCTGAGTAGAAGATAGCTGCACGTGGAGATTTCTTGGTAAGGAGAGAATGTGAGTGGTTGAGGGCTCTGCATCTAAGCT----GCTTGGATCAGATCCTGGTCTTGGGATGCTGGC-TAATCTTtcagttttctgatttgtagaatggggataatagtagcacctttctcttagtgttgcagtgaggGCTCTGAGCGTGCTACCCGGCACC s panTro5.chr19 36183293 580 + 61309027 AGATATTTTGTAAATGTAGTTTGAAGAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTATAACCCC-AGGAAGGCATGCATGGAATGTGTTTGTAGCCGGAAAGCTTAAACTTAATTTTGTATCCTCAGAAGAAATACTTGTGTTTCT---GGGAGAGGATTGGGACAGTGTC--TGGAAATTGGGGTGGCGGGTCCAAGAGAG--GAATTAGGTG--GTGTGTGTGTAGCACTCTCTGGGGG--CC-TGACCA-GAGGAGCA----GTGCAGCGTTCCCTCCACAAAGCCATCTGCACTAACACACAGATGGGCGTGTCCCTGTTGTTGCCTCTGGCTGCAAGGGTCTCTCCCTT--GCTTAGCGTCT---GTCCTCCCAGTACCATCTGAGTAGAAGATAGCTGCACGTGGAGATTTCTTGGTAAGGAGAGAATGTGAGTGGTTGAGGGCTCTGTATCTAAGCT----GCTTGGATCAGATCCTGGTCTTGGGATGCTGGC-TAATCTTtcagttttctgatttgtagaatggggataatagtagcacctttctcttagtgttgcagtgaggGCTCTGAGCGTGCTACCCGGCACC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39927540 580 + 64411610 AGATATTTCGTAAATGTAGTTTGAAGAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTATAACCCC-AGGAAGGCATGCATGGAATGTGTTTGTAGCCGGAAAGCTTAAACTTAATTTTGTATCCTCAGAAGAAATACTTGTGTTTCT---GGGAGAGGATTGGGACAGTGTC--TGGAAATTGGGGTGGCGGGTCCAAGAGAG--GAATTAGGTG--GTGTGTGTGTAGCACTCTCTGGGGG--CC-TGACCA-GAGGAGCA----GTGCAGCGTTCCCTCCACAAAGCCATCTGCACTAACACACAGATGGGCGTGTCCCTGTTGTTGCCTCTGGCTGCAAGGGTCTCTCCCTT--GCTTAGCGTCT---GTCCTCCCAGTACCATCTGAGTAGAAGATAGCTGCACGTGGAGATTTCTTGGTAAGGAGAGAATGTGAGTGGTTGAGGGCTCTGTATCTAAGCT----GCTTGGATCAGATCCTGGTCTTGGGATGCTGGC-TAATCTTtcagttttctgatttgtagaatggggataatagtagcacctttctcttagtgttgcagtgaggGCTCTGAGCGTGCTACCCGGCACC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6339229 580 - 8369475 AGATATTTCGTAAATGTAGTTTGAAGAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTATAACCCC-AGGAAGGCATGCATGGAATGTGTTTGTAGCCGGAAAGCTTAAACTTAATTTTGTATCCTCAGAAGAAATACTTGTGTTTCT---GGGAGAGGATTGGGACAGTGTC--TGGAAATTGGGGTGGCGGGTCCAAGAGAG--GAATTAGGTG--GTGTGTGTGTAGCACTCTCTGGGGG--CC-TGACCA-GAGGAGCA----GTGCAGCGTTCCCTCCACAAAGCCATCTGCACTAACACACAGATGGGCGTGTCCCTGTTGTTGCCTCTGGCTGCAAGGGTCTCTCCCTT--GCTTAGCGTCT---GTCCTCCCAGTACCATCTGAGTAGAAGATAGCTGCACCTGGAGATTTCTTGGTAAGGAGAAAATGTGAGTGGTTGAGGGCTCTGCATCTAAGCT----GCTTGGATCAGATCCTGGTCTTGGGATGCTGGC-TAATCTTtcagttttctgatttgtagaatggggataatagtagcacctttctcttagtgttgcagtgaggGCTCTGAGCGTGCTACCCGGCACC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63936522 581 - 106955855 AGTTATTTTGTAAATGTAGTTTGAAGAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTATAACCCC-AGGAAGGCATGCATGGAATGTGTTTGTAGCCAGAAAGCTTAAACTTAATTTTGTATCCTCAGAAGAAATACTTGTGTTTCT---GGGAGAGGATTGGGACGGTGTC--TGGAAATTGGGGTGGCGGGTCCAAGAGAA--GAATTAGGTG--GTGTGTGTATAGCACTGTCTGGGTT--CC-TGACCA-GAGGAGCA--GTGTGCAGCGTTCCCTCCACAAAGCCATCTTCACTAACGCACAGATGGGCGTGTCCCTGTTGTTGCCTCTGGCTGCAAGGGTCTCTCCCTT--GCTTAGCGTCT---GTTCTCCCAGTACCATCTGAGTAGAAGATAGCTGCACGTGGAGATTT-TTGGTAAGGAGAGAATGTGagtggttgagagctctgcatctaagct----gcttggatcagatcctggtcttgggatgctggc-taatctttcagttttctgatttgtagaatggggataatagtagcacctttctcttagtgttgcagtgaggGCTCTGAGTGTGCTACCCGGCACC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30251358 582 + 53671032 AGATATTTTGTAAATGTAGTTTGAAGAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTATAACCCC-AGGAAGGCATGCTTGGAATGCGTTTGTAGCCAGAAAGCTTAAACTTAATTTTGTATCCTCAGAAGAAATACTTGTGCTTCT---GGGAGAGGATTGGGACAGTGTC--TGGAAATTGGGGTGGCGGGTCCAAGAGAG--GAATTAAGTG--GTGTGTGTGTAGCACTGTCTGGGGC--CC-TGACCA-GAGGAGCA--GTGTGCAGTGTTCCCTCCACAAAGCCATCTGCACTAATGCACAGATGGGCGTGTCCCTGTTGTTGCCTCTGGCTTCGAGGGTCTCTCCTTT--GCTTAGCGTCT---GTCCTCTCAGTACCATCTGAGTAGAAGATAGCTGCATGTGGAGATTTCTTGGTAAGGAGAAAATGTGagtggttgagagctctgcatctaagct----gcttggatccgatcctggtcttgggatgctggc-taatctttcagttttctgatttgtagaatggggataatagtagcacctttctcttagtgttgcagtgagggctctgagcacactccctggcacc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34705267 582 + 59248254 AGATATTTTGTAAATGTAGTTTGAAGAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTATAACCCC-AGGAAGGCATGCTTGGAATGCGTTTGTAGCCAGAAAGCTTAAACTTAATTTTGTATCCTCAGAAGAAATACTTGTGCTTCT---GGGAGAGGATTGGGACAGTGTC--TGGAAATTGGGGTGGCGGGTCCAAGAGAG--GAATTAAGTG--GTGTGTGTGTAGCACTGTCTGGGGC--CC-TGACCA-GAGGAGCA--GTGTGCAGTGTTCCCTCCACAAAGCCATCTGCACTAATGCACAGATGGGCGTGTCCCTGTTGTTGCCTCTGGCTTCGAGGGTCTCTCCTTT--GCTTAGCGTCT---GTCCTCTCAGTACCATCTGAGTAGAAGATAGCTGCATGTGGAGATTTCTTGGTAAGGAGAAAATGTGAGTGGTTGAGAGCTCTGCATCTAAGCT----GCTTGGATCAGATCCTGGTCTTGGGATGCTGGC-TAATCTTtcagttttctgatttgtagaatggggataatagtagcacctttctcttagtgttgcagtgaggGCTCTGAGCACACTCCCTGGCACC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4577378 584 - 13342542 AGATATTTTGTAAATGTAGTTTGAAGAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTATAACCCC-AGGAAGGCATGCTTGGAATGCGTTTGTAGCCAGAAAGCTTAAACTTAATTTTGTATCCTCAGAAGAAATACTTGTGCTTCT---GGGAGAGGATTGGGACAGTGTC--TGGAAATTGGGGTGGCGGGTCCAAGAGAG--GAATTAAGTGGTGTGTGTGTGTAGCACTGTCTGGGGC--CC-TGACCA-GAGGAGCA--GTGTGCAGTGTTCCCTCCACAAAGCCATCTGCACTAATGCACAGATGGGCGTGTCCCTGTTGTTGCCTCTGGCTTCGAGGGTCTCTCCTTT--GCTTAGCGTCT---GTCCTCCCAGTACCATCTGAGTAGAAGATAGCTGCATGTGGAGATTTCTTGGTAAGGAGAAAATGTGAGTGGTTGAGAGCTCTGCATCTAAGCT----GCTTGGATCAGATCCTGGTCTTGGGATGCTGGC-TAATCTTtcagttttctgatttgtagaatggggataatagtagcacctttctcttagtgttgcagtgagggctctgagcacactccctggcacc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5501832 582 + 7714307 AGATATTTTGTAAATGTAGTTTGAAGAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTATAACCCC-AGGAAGGCATGCTTGGAATGCGTTTGTAGCCAGAAAGCTTAAACTTAATTTTGTATCCTCAGAAGAAATACTTGTGCTTCT---GGGAGAGGATTGGGACAGTGTC--TGGAAATTGGGGTGGCGGGTCCAAGAGAG--GAATTAAGTG--GTGTGTGTGTAGCACTGTCTGGGGC--CC-TGACCA-GAGGAGCA--GTGTGCAGTGTTCCCTCCACAAAGCCATCTGCACTAACGCACAGATGGGCGTGTCCCTGTTGTTGCCTCTGGCTTCGAGGGTCTCTCCCTT--GCTTAGCGTCT---GTCCTCCCAGTACCATCTGAGTAGAAGATAGCTGCATGTGGAGATTTCTTGGTAAGGAGAGAATGTGAGTGGTTGAGAGCTCTGCATCTAAGCT----GCTTGGATCAGATCCTGGTCTTGGGATGCTGGC-TAATCTTtcagttttctgatttgtagaatggggataatagtagcacctttctcttagtgttgcagtgaggGCTCTGAGCACGCTCCCTGGCACC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29305827 582 + 50890351 AGATATTTTGTAAATGTAGTTTGAAGAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTATAACCCC-AGGAAGGCATGCTTGGAATGCGTTTGTAGCCAGAAAGCTTAAACTTAATTTTGTATCCTCAGAAGAAATACTTGTGCTTCT---GGGAGAGGATTGGGACAGTGTC--TGGAAATTGGGGTGGCGGGTCCAAGAGAG--GAATTAGGTG--GTGTGTGTGTAGCACTGTCTGGGGC--CC-TGACCA-GAGGAGCA--GTGTGCAGTGTTCCCTCCACAAAGCCATCTGCACTAACGCACAGATGGGCGTGTCCCTGTTGTTGCCTCTGGCTTCGAGGGTCTCTCCCTT--GCTTAGCGTCT---GTCCTCCCAGTACCATCTGAGTAGAAGATAGCTGCATGTGGAGATTTCTTGGTAAGGAGAGAATGTGAGTGGTTGAGAGCTCTGCATCTAAGCT----GCTTGGATCAGATCCTGGTCTTGGGATGCTGGC-TAATCTTtcagttttctgatttgtagaatggggataatagtagcacctttctcttagtgttgcagtgaggGCTCTGAGCACGCTCCCTGGCACC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 938081 582 - 2385121 AGATATTTTGTAAATGTAGTTTGAAGAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTATAACCCC-AGGAAGGCATGCTTGGAATGCATTTGTAGCCAGAAAGCTTAAACTTAATTTTGTATCCTCAGAAGAAATACTTGTGCTTCT---GGGAGAGGATTGGGACAGTGTC--TGGAAATTGGGGTGGCGGGTCCAAGAGAG--GAATTAAGTG--GTGTGTGTGTAGCACTGTCTGGGGC--CC-TGACCA-GAGGAGCA--GTGTGCAGTGTTCCCTCCACAAAGCCATCTGCACTAACGCACAGATGGGCGTGTCCCTGTTGTTGCCTCTGGCTTCGAGGGTCTCTCCCTT--GCTTAGCGTCT---GTCCTCCCAGTACCATCTGAGTAGAAGATAGCTGCATGTGGAGATTTCTTGGTAAGGAGAGAATGTGagtggttgagagctctgcatctaagct----gcttggatcagatcctggtcttgggatactggc-taatctttcagttttctgatttgtagaatggggataatagtagcacctttctcttagtgttgcagtgagggctctgagcacgctccctggcacc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2380246 582 + 4274983 AGATATTTTGTAAATGTAGTTTGAAGAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTATAACCCC-AGGAAGGCATGCTTGGAATGTGTTTGTAGCCAGAAAGCTTAAACTTAATTTTGTATCCTCAGAAGAAATACTTGTGCTTCT---GGGAGAGGATTGGGACAGTGTC--TGGAAATTGGGGTGGCGGGTCCAAGAGAG--GAATTAGGTG--GTGTGTGTGTAGCACTGTCTGGGGC--CC-TGACCA-GAGGAGCA--GTGTGCAGCGTTCCCTCTACAAAGCCATCTGCACTAACGCACAGATGGGCGTGTCCCTGTTGTTGCCTGTGGCTACGAGGGTCTCTCCCTT--GCTTAGCGTCT---GTCCTCCCAGTACCATCTGAGTAGAAGATAGCTGCATGTGGAGATTTCTTGGTAAGGAGAGAATGTGagtggttgagagctctgcatctaagct----gcttggatcagatcctggtcttgggatgctggc-taatctttcagttttctgatttgtagaatggggataatagtagcacctttctcttagtgttgcagtgagggctctgagcatgctccctggcacc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28592703 573 + 49145316 AGACATTTTGTAAATGTACTTTGAAGAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTATAACCCC-AAGAAGGCATGCTTGGAATG----TGTAGCCAGAAAGCTTAAACTTAATTTTGTATCCTCAGAAGAAATACTTGTGTTTTT---GGGAGAGGACTGGGATGATGTC--TGGAAACTGGGGTGGCAGGTCCAAGAGAG--GAATTAGGTG--GTGTGTCTTTAGCACTGTCTGGGGG--CC-TGACCA-AAGTAGCT--GTATGCAGCGTTCCTTCCACAAGGCC-TTTGCACTCCCGAACAGATGGGCATATCCCTGTTGATGCCTCTGGCTGTGAGGG--TCTCCCTT--GTTTAGCATCT---GTTCTTCCAGTATCCTCTGAGTAGAAGATAGCTTCATGTGGAGATTTCTTGGTAA-GAGAGAATGTGAGTAGTTGAGAGCTCTGCCTCTAAGTT----GCTTGGATCAGATCCTGGTCTTGGGATGCTGGC-TAATCTTtcaattttctgatttgtagaatggggataatagtagca-cttccccttagtgttgcagtgaggGCTCTGAGCATGCTACCCGGCACC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5439027 573 + 8899380 AGACATTTTGTGAATGTAGTTTGAAGAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTACAACCCC-AAGAAGGCATGCTTGGAATG----TGTAGCCAGAAAGCTTAAACTTAATTTTGTATCCTCAGAAGAAATACTTGTGTTTCT---GGGAGAGGACTGGGATGATGTC--TGGAAACTGGGGTGGCAGGTCCAAGAGAG--GAATTAGGTG--GTGTGTCTTTAGCACTGTCTGGGGG--CC-TGACCA-GAGTAGCC--ATATGCAGTGTTCCTTCCACAAGGCC-TTTGCATTACCACACAGATGGGCATGTCCCTATTGATGCCTTTGGCTGTGAGGG--TCTCCCTT--GCTTAGCATCT---GTTCTTCCATTATCCTCTGAGTAGAAGATAGCTTCATGTGGAGATTTCTTGGTAA-GAGAAAATGTGAGTGGTTGAGAGCTCTGCATCTAAGCT----GCTTGGATCAGATCCTGGTCTTGGGATGCTGGC-TAATCTTtcaattttctgatttgtagaatggggataatagtagca-cttccccttagtgttgcagtgaggGCTCTGAGCATGCTATCCAGCACC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1648169 573 - 2680843 AGACATTTTGTAAATGTAGTTTGAAGAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTATAACCCC-AAGAAGGCATGCTTGGAATG----TGTAGCCAGAAAGCTTAAACTTAATTTTGTATCCTCAGAAGAAATACTTGTGTTTCT---GGGAGAGGACTGGGATGATGTC--TGGAAACTGGGGTGGCAGGTCCAAGAGAG--GAATTAGGTG--GTGTGTCTTTAGCACTGTCTGTGGG--CC-TGACCA-GAGTAGCT--GTATGCAGCGTTCCTTCCACAAGGCC-TTTGCACTACCACACAGATGGGCATGTCCCTGTTGATGCCTCTGGCTGTGAGGG--TCTCCCTT--GCTTAGCATCT---GTTCTTCCAATATCCTCTGAGTAGAAGATAGCTTCATGTGAAGATTTCTTGGTAA-GAGAGAATGTGagtggttgagagctctgcatctaagct----gcttggatcagatcttggtcttgggatgttggc-taatctttcaattttctgatttgtagaatggggataatagtagca-cttccccttagtgttgcagtgaggGCTCTGAGCATGCTATCCAGCACC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 395012 573 - 4471408 AGACATTTTGTAAATGTAGTTTGAAAAATCTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTATAACCCT-AAGAAGGCATGCTTGGAATG----TGTAGCCAGAAAGCTTAAACTTAATTTTGTATGCTCAGAAGAAATACTTGTGTTTCT---GGGAGAGGCCTGGGATGATGTC--TGGAAACTGGGGTGGCAGGTCCAAGAGAG--GAATTAGTTG--GTGTGTCTTTAGCACTGTCTGGGGG--CC-TGACCA-GAGCAGCT--GTATACAGCGTTCCTTCCACAAGGCC-TTTGCACTACCGCACAGATGGACGTGTCCCTGTTGATGCCTCTGGCTGTGAGGG--TCTCCCTT--GCTTAGCATCT---GTTCTTCCAGTATCCTCTGAGTAGAAGATAGCTTCATGTGGAGATTTCTTGGTAA-GAGAGAATGTGAGTAGTTGAGAGTGCTGCATCTAAGGT----GCTTGGATCAGATCCTGGTCTTGGGATGCTGGC-TAATCTTtcaattttctgatttgtagaatggggataatagtggca-cttccccttagtgttgcagtgaggGCTCTGAGCATGCTACCCAGCACC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3989269 567 - 30143674 AGATGTTTTGTAAATGTAATATGAAGAATTTTAGGGAAAACTTTAAATTCAA-CCAAATTGACCCAGCTGTAACCCC-AGGAAGGCATGATTGGAATGTGTTTGTAGCCAGAAAACTGGAATTTAAGTTTGTATCCTCAGAGCAAAGACTAGTATTTCT---AGGAGAGGATCAGGCTGGTGTCTGTGGAAA-TGGGGTGGTAGGTCCAAGAGAG--GAAT-------------TTGGTGGCACCGTCTGGGGG--CCGTGACCA-GGGGAGCT--GTGTGCAGT----CCTCCACAAGGCT-CATGTACCACCAAGCCGATGGGTATGTCCCTATTGACACCTCTCGCTGTGAGGGTCTTtccctt--tctcagctttc---ctcatcctactacgctctgattagaacatggctttccatggagattttttgccaaggagagaatgtgAGTGGTTGAGAGCTC-ACATCTAGACT----GCTTGGATGAGATCCTGGTCTTGGGATGCTGGC-TAAtatttcggtttttccatacgtagaatggggataagagtagcacgtttctcttagtgttgcagtgaggGCTCTGAGCACGCCACCTGGGACC i micMur3.chr22 C 0 I 9 s proCoq1.NW_012149263v1 603737 580 + 2501019 AGATGTTTTGTAAATGTAATTTGAAGAATTTCAGGGAAAACTTTAAATTCAA-CCAAACTGACCCAGCTGTAACCCC-AGGAAGGCATGATTGGAATGTGTTTGTAGCCAGAAAACTTGAATTTAATTTTGTATCCTCAGAGGAAAGACTAGTGTTTCT---AGGAGAGGATCAGGATGATGTCCATGGAAATTGGGGTGGCAGGTCCAAGAGAG--GAATTGGGTG--GTGTGTTGGTAGTGCCGTCTGGGGG--CCCTGACCA-GAGGAGCT--GTGTGCAGT----TCTCCACAAGGCT-TATGTACCACCAAATGGATGGGTATGTCCCTACTGTCACCTCTAGCTGTGAGGGTCTTtcccct--tttcagcttcc---ctcctcctaataccctccgattagaacatggctttacatggagattttttgccaaggagagaatgtgAATGGTTGAGAGCTCTGCACCTAGACT----GCTTGGATCAGATCCTGGTCTTGGGATGCTGGC-TAAtatttccgtttttccatatgtagaatgggaataacagtagcatctttctcttagtgttgcagtgaggGCTCTGCGCACACCACCTGGGACC i proCoq1.NW_012149263v1 C 0 I 16 s otoGar3.GL873654 5517281 563 + 5549422 AAATG-TTTGTAAATGTAGTTTGATGGATTTCAGGGAAAACTTTAAATTCAA-CCAAATTGACCCAGCTGTAACCCC-AAAAAGGCATGATTGGAATGTGTTTATAGCCAGAAAACTCGAACTTAATTTTGTATCCCCAGAGGAAAGACTAGTGCTTCT---AGGAGAGGATCAGGATGATGTCTGTGGAAATTGGGGT-GCAGGTCCATGGGAG--GAATTAGGTG--GCATGTCTATAGCACTGTCCAAGGG--CCCTGACCA-AAGGAGCA--ATGTGCAGA----TCTCCATAAGGCT-TCTGTTCTACCAAATGAATGGGTGT--------TGATACCTCTGGTT-TAAGGGTCTTTCCTTT--TCTCAGCTTCC---CTCCTTCACAGCCCCTGTCATTAGAGCATGGCTTCACATGGAGATTTCTTGCCAAGGAGAGATTGTGAGTGGTTGAGAGCTCTGTATCTAGATT----GCTTGGATCAGATCCTGGTCTT-GGATtctggc------tttcagtttttccatatgtagaatggggataatagtagcacctttctcttggtgttgtggtaaggGCTTTGAGCACACCACTTGGCCCC i otoGar3.GL873654 I 869 I 1 s mm10.chr7 111131994 474 - 145441459 AGACGTTTTGTAAATAGAGTTTGACAAATTTCAGGGAAAACTTTAAATTCAAGCCAAACTGACCCAGCTATAACCCCAAGGAAGGCATGTTTGGAATGTGTTTGTGGTCAGAAAGCTTAAACCTAATTTTGTATACTCC-AAGAAAGACTTGTGTTTCC---GGGAGAGGTTTGGGATGATATCTGTAGAAGTTGGAGTGGCTGGTGCAAGAGAGCTAACTTAGGCG--GTGTGAGGGTTTCTCTGTATGAG-T--CC-AGACCAGGAGTGGTG--GTGCACAGT----------------C-CTTGCAGGATCAAAGGGAGGGG-----------------------------------CCACCTT--CCTTA-----T---ACCCTTC--------------------ATAGTTTCATCTGGAAGTTTC-TGCCAAAGAG---------GTGGTCCA-AGCTCT--ATTCAAAGT----GC-TGTAGTAGATTCTGGTCTTAGGATGTTGTC-TAATCT------------AACTGTAGCATGGGCACAGCATT-GTACTTTTCTTTTAGTGTTGCCATGAGAACTTTAAGCTTGGTA--------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4648157 544 - 122678785 AGACATCTTGTGAG-ACAGTTTGGTGAATTTCAGGGAAAACTTTAAGTTCAA-CTAAAATGACCCGGCTATAACCCC-AGGAAGGTATGAGTGGAATGTGTTTGTAGCCAGAATGCTTAAACTTAATTTTGTATCGTCAGAAGAAAGACT-ACATTTCT---AGGAGAGGATTAGGATGGTGTCTGTGGAAATCGGGGTGGCAGGTCCAAGAGAA--GAATTGGGTG--CTGTGTCTGTAGCACTGCCTGGAGG--CCCTGGCCA-GAGGAGCT--GTGTGCAGT----CCTCCAGTGAGCT-TCTGCACCCCCAGACAGATGGGTGCATCTCTGTTGATGCCTCAAGCCAGGAGAATCTttccctt--gctttacttcc---acactcctaataccttctgattagaacatggc-------------ttcctgccaaggagagaatgtgAATGGTTGAGAGCTCCTTATCCAGACTGACCGCTTGGATCAGATCCtgatcttggggtgctggc-taatctctttgtttccctctctgtagaatggggagaatggtagacccttcctcTT-------------------------CGCTGCCCAGCACC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 384352 564 + 643850 AGACATTTTATAAATATGTTTTGAAGGATTTCAGGGAAAACTTTATATTCAA-CCAAATTGACCCAGCTTTAACCCC-AGGAAGGCATGATTGGAATGTGTTTGTAGTCAGAAAGCTTAACCTAAATTTTATAACCTAAGAAGAAAGAACTGACTTTCTAAAAGGAAAGGAGTAGAATAGTTGGGGTGGATATTGTGGTAGGGAGTCCAAGAGAA--GAATTGGTTG--ATATGTCTGTAGGACTGCTTGGGAGCTCC-TGACTA-GAGGAGCTGTGTGTGCAG-------------------CATGCTCTACCAAACAACTGGGTGTGTTTTTGTTGGTCCCTTTGA-TGTGAGGATCTTTCCCTTACACTTTGCTTCCCTGGTACACCTGATACTCTCTGTTGGGAATACGGATTCACATGCAGATTTCTTGTTAAGGAGAGAATGTGAGTGATTGAGG------------ATCT----ACCTAGGTCAGATCCTGGTTTTGAGATGCTGGTTTAACCTctcactttttccgtctgtagaatggggataataatagcaccttcctcctggtgttcctgggagCGCATTTAGCAC-CTGCTTGCCATC i dasNov3.JH563638 C 0 C 0 a score=18117.000000 s hg38.chr19_GL383574v1_alt 116241 2 + 155864 TG s panTro5.chr19 36183873 2 + 61309027 TG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928120 2 + 64411610 TG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6339809 2 - 8369475 TG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937103 2 - 106955855 TG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30251940 2 + 53671032 tg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34705849 2 + 59248254 TG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4577962 2 - 13342542 tg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5502414 2 + 7714307 TG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29306409 2 + 50890351 TG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 938663 2 - 2385121 tg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2380828 2 + 4274983 tg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28593276 2 + 49145316 TG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5439600 2 + 8899380 TG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1648742 2 - 2680843 TG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 395585 2 - 4471408 TG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4648701 2 - 122678785 TA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 384916 1 + 643850 T- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 604317 16 + 2501019 I e micMur3.chr22 3989836 9 - 30143674 I e otoGar3.GL873654 5517844 1 + 5549422 I e mm10.chr7 111132468 0 - 145441459 C a score=164713.000000 s hg38.chr19_GL383574v1_alt 116243 18 + 155864 TGATAAGTATTCAATGAC s panTro5.chr19 36183875 18 + 61309027 TGATAAGTATTCAAtgac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928122 18 + 64411610 TGATAAGTATTCAAtgac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6339811 18 - 8369475 TGATAAGTATTCAAtgac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937105 18 - 106955855 TGCTAAGTATTCAATGAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30251942 18 + 53671032 tgataaatattcaatgag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34705851 18 + 59248254 TGATAAATATTCAATGAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4577964 18 - 13342542 tgataagtattcaatgag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5502416 18 + 7714307 TGATAAGTATTCAATGAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29306411 18 + 50890351 TGATAAGTATTCAATGAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 938665 18 - 2385121 tgataagtattcaatgag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2380830 18 + 4274983 tggtaagtattcaatgag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28593278 18 + 49145316 TGATAAGTATTCAATGAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5439602 18 + 8899380 TGATAAGTATGCAATGAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1648744 18 - 2680843 TGATAAGTATTCAGTGAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 395587 18 - 4471408 TGATAAGTATTCAATGAG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5517845 13 + 5549422 --ATACGTATCCCAC--- i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111132468 11 - 145441459 ----AAGT-TACAGCT-- i mm10.chr7 C 0 C 0 s canFam3.chr1 4648703 16 - 122678785 GTATAAGTGCTCAGTA-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 384917 14 + 643850 --AGTAGTACTCAGCG-- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 604317 16 + 2501019 I e micMur3.chr22 3989836 9 - 30143674 I a score=6821.000000 s hg38.chr19_GL383574v1_alt 116261 1 + 155864 -A s panTro5.chr19 36183893 1 + 61309027 -a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928140 1 + 64411610 -a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6339829 1 - 8369475 -a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937123 1 - 106955855 -A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30251960 1 + 53671032 -a i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34705869 1 + 59248254 -A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4577982 1 - 13342542 -a i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5502434 1 + 7714307 -A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29306429 1 + 50890351 -A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 938683 1 - 2385121 -a i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2380848 1 + 4274983 -a i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28593296 1 + 49145316 -A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5439620 1 + 8899380 -A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1648762 1 - 2680843 -A i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 395605 1 - 4471408 -A i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 604333 1 + 2501019 -A i proCoq1.NW_012149263v1 I 16 C 0 s mm10.chr7 111132479 1 - 145441459 -A i mm10.chr7 C 0 C 0 s canFam3.chr1 4648719 1 - 122678785 -A i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 384931 1 + 643850 T- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3989836 9 - 30143674 I e otoGar3.GL873654 5517858 0 + 5549422 C a score=2975023.000000 s hg38.chr19_GL383574v1_alt 116262 221 + 155864 GTATTAGCTCTCGTTGGTATTCATAAAG-TAG-TAACTGGCC-TCTGGTTCATACATCAGTTTTCTTTGAGCTTAGATAGCCTAAATAATTAATCCCCATGGAACTGCTTGCTTCTGGGTGCATTG--AATAAGCTGATAAACAGACACTGGGAAGTAATGACAGATAAGCTCTTCCTACACTGCTCATCCAGGGAatccagcctgcagttctcaggggagactt-c s panTro5.chr19 36183894 221 + 61309027 gtattagctctcgttggtattcataaag-tag-taactggcc-tctggttcatacatcagttttctttgagcttagatagcctaaataatcaacccccatggaactgcttgcttctgggtgcattg--aATAAGCTGATAAACAGACACTGGGAAGTAATGACAGATAAGCTCTTCCTAAATTGCTCATCCAGGGAatccagcctgcagttctcaggggagactt-c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928141 221 + 64411610 gtattagctctcgttggtattcataaag-tag-taactggcc-tctggttcatacatcagttttctttgagcttagatagcctaaataatcaacccccatggaactgcttgcttctgggtgcattg--aATAAGCTGATAAACAGACACTGGGAAGTAATGACAGATAAGCTCTTCCTAAATTACTCATCCAGGGAatccagcctgcagttctcaggggagactt-c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6339830 221 - 8369475 gtattagctcttgttggtattcataaaa-tag-taactggcc-tctggttcatacatcagttttctttgagcttagatagcctaaatactcaatccccatggaactgcttgcttctgggtgcattg--aATAAGCTGATAAACAGACACTGGGAAGTAATGACAGATAAGCTCTTCCTAAACTGCTCATCCAGGGAatccagcctgcagttctcaggggagactt-c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937124 222 - 106955855 GTATTAGCTCTCGTTGGTATTCATAAAG-TAGTTAACTGGCC-TCTGGTTCATACATCAGTTTTCTTTGAACTTAGATAGCCTAAATAATCAGTCCCCATGGAACTGCCTGTTTCTGGGTGCATTG--AATAAGCTGATAAACAGATATTGGGAAGTAATGACAGATAAGCTCTTCCTAAACTGCTCATCCAGGGAatccagcctgcagttctcaggggagactt-c i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30251961 216 + 53671032 gtattagctctCGTTGGTGTttataaac-tag-taactggcc-tctggttcatatatcagtcttctttgagcttagatagcctaaataatcagtccccatgaaactgcttgcttctggttgcattg--aATAAGCTG----ATAGACATTGGGAAGTAATGACAGATAAGCTGCTCCTAAACTGTTCATCCAGGAAatccagcctgcagttctc--gggagacttcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34705870 216 + 59248254 GTATTAGCTCTCGTTGGTGTTTATAAAC-TAG-TAACTGGCC-TCTGGTTCATATATCAGTCTTCTTTGAGCTTAGATAGCCTAAATAATCAGTCCCCATGAAACTGCTTGCTTCTGGTTGCATTG--AATAAGCTG----ATAGACATTGGGAAGTAATGACAGATAAGCTGCTCCTAAACTGTTCATCCAGGAAatccagcctgcagttctc--gggagacttcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4577983 216 - 13342542 gtattagctctCGTTGGTGTttataaac-tag-taactggcc-tctggttcatacatcagtcttctttgagcttagatagcctaaataatcagtccccatgaaactgcttgcttctggttgcattg--aATAAGCTG----ATAGACATTGGGAAGTAATGACAGATAAGCTGCTCCTAAACTGTTCATCCAGGAAatccagcctgcagttctc--gggagacttcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5502435 216 + 7714307 GTATTAGCTCTCGTTGGTGTttataaac-tag-taactggcc-tctggttcatacatcagtcttctttgagcttagatagcctaaataatcagtccccatgaaactgcttgcttctggTTCCATTG--AATAAGCTG----ATAGACATTGGGAAGTAATGACAGATAAGCTGCTCCTAAACTGTTCATCCAGGGAatccagcctgcagttctc--gggagacttcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29306430 216 + 50890351 GTATTAGCTCTCGTTGGTGTTTATAAAC-TAG-TAACTGGCC-TCTGGTTCATACATCAGTCTTCTTTGAGCTTAGATAGCCTAAATAATCAGTCCCCATGAAACTGCTTGCTTCTGGTTGCATTG--AATAAGCTG----ATAGACATTGGGAAGTAATGACAGATAAGCTGTTCCTAAACTGCTCATCCAGGGAatccagcctgcggttctc--gggagacttcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 938684 216 - 2385121 gtattagctctCGTTGGTGTttataaac-tag-taactggcc-tctggttcatacatcagtcttctttgagcttagatagcctaaataatcagtccccatgaaactgcttgcttctggttgcattg--aATAAGCTG----ATAGACATTGGGAAGTAATGACAGATAAGCTGCTCCTAAACTGTTCATCCAGGGAatccagcctgcagttctc--gggagacttcc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2380849 220 + 4274983 gtattagctctCGTTGGTGTttataaac-taa-taactggcc-tctggttcatacatcagtcttctttgagcttagatagcctaaataatgagtccccatgaaaccgcttgcttctggttgcattg--aATAAGCTGATAAATAGACATTGGGAAGTAATGACAGATAAGCTGTTCCTAAACTGCTCATCCAGGGAatccagcctgcagttctt--gggagacttcc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28593297 221 + 49145316 GTATTAGCTCTTTTTGGTATTCAtaaac-tac-taactggccttctggttcatacatcagtcatctttgagcttagataggctaaataatcagtccctatgaaactgcttgcttctgggtacactgacacaaAGCTG----ATGAACAGTGGGAAGTGATGACAGATAAGCTCTTCCTAAACTGCTCATCCAGGGAATTTAGCCTGCAGTTCTCAGGGAAGACTTTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5439621 219 + 8899380 GTATTAGCTCTTGTTGGTATTCATAAAC-TAC-TAACTGGCCTTCTGGTTCATATATCGGTCGTCTTTGAACTTAGATGGCCTAAATAATCAGTCCCTATGAAACTGCTTGCTTCTGTGTACATTG--ACAAAGCTG----ATAAACAGTGGGAAGTAATGACAGATAAGCTCTTCCTAAACTGCTCATCCAGGGAATTTAGCCTGCAGTTCtcagggaagactttc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1648763 219 - 2680843 GTATTAGCTCTTGCTGGTATTCAtaaac-tac-taactggtcttctggttcatacatcagtcatctttgagcttagatagcctaaataatcagtccctatgaaactgcttgcttctgggtacattg--acaaaGCTG----ATAAACAGTGGGAAGTAATGACAGATAAGCTCTTCCTAAACTGCTCATCCAGGGaatttagcctgcagttctcagggaagactttc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 395606 216 - 4471408 GTATTAGCTCTTGTTGGTATTCAtaaac-tac-taactggccttctggttcatacatcagtcatctttgagcttagatagccta---aatcagtccctatgaaactgcttgtttctgggtacattg--ccaaaGCTG----ATAAACAGTGGGAAGTAATGACAGATAAGCTCTTCCTAAACTGCTCATTCAGGGAATTTAGCCTGCAGTTCtcagggaagactttc i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3989845 219 - 30143674 GTGTTAGCTCTCCTTGGTATttataaac-tag-taactggccttctggttaatacatcggtcatctttgagcttggatagcctg---gatcattccccttgaacctgcctgctcttgagtgaactg--acaaaGCTGATAACCGGAGGGTGGGAAATTATGACAGATAAGCTTTTCCCAAACTGCTCATCCAGGGAATCGACTGTGTAGTTCTCAGGGAAGACTTC- i micMur3.chr22 I 9 I 225 s proCoq1.NW_012149263v1 604334 217 + 2501019 GTGTTAGCtctcattggtatttataaac---g-taattggccttctggttaatacatcggtcatctttgagcttagatagccag---aatcattcccattgaacctgcctgctcctgagtgaactg--acaaaGCTGATAACCAGACGGCGGGAAATTCTGACAGATAAGCTCTTCCCAAACTGCTCATCCAGGGACTCGAGTGTGCACTTCTCAGCGAAGACTTC- i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5517858 178 + 5549422 ----------------------------------AAGT---------GTTAATAGATCAGTCATCTTTGAGCTTAGATAGCTTG---AGTCATTCTCATGGAACCTTCCTGCTTCTGAGTGAACTG--ACAAAGCTGATAACCAGACTGTGGGAAGTGATGACAGATAAGTTCTTCCCAAACTGCTCATCCAGGGAATCCTGAGTACAGTTCtcagggaagacttc- i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111132480 202 - 145441459 GGGCTAGCCCTT-TTGGTATAGATG----TAG-TTATTGGCCTTCTGGTTAATACATCAGTCGTCTTTGAGCCT-------------AACTTGTCCCCCTGAAAC----TGCTCCTGGGCTCAGTG--ACAAAGCTGCTAACCAGACTGTGGGAAGTGATGACAGACAGGCTCTTCCCAAACTGCTCAGGCAGGAAAGCCAACCTGAATGTGTCAAGAGAAACTTTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4648720 216 - 122678785 ATATTAGACCTCATCAGTATTTATAAACTTAG-TAACTGGCCTTCTGGCTAGTACA-CAGTCATCTTTGAGTTTGGGTGGCCTG---AGTCAGTTGCCCTGGACCTGCTTACTCCTGGGGGCACTG--ACAATACTGAGAAACAGAG---GGGAAGTCGTGGCAGATACACTCTTCCCAAAGCGCTCATCCAGAGAACCC-GACTGCTGTTgtcagggaagatttcc i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 384932 180 + 643850 GTGTTAGCTC---------------ATC-TTG-TAATTTGTC----AGTCCA-----------TCTTTGAGTTTAGATAGCCCA---AATTAATCCCCCTGAACCTTCTTGCTCCCGGGTGCACTG--CCAAAGCTGAGAACCAGATAGTGAGAAG---TGATAGACAGGCTCTTCCCATACTGCTTCTTTAAGGA-------CTACAGTTGGCAGGAAAGACTTCC i dasNov3.JH563638 C 0 C 0 a score=19110.000000 s hg38.chr19_GL383574v1_alt 116483 1 + 155864 t s panTro5.chr19 36184115 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928362 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340051 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937346 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252177 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34706086 1 + 59248254 t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4578199 1 - 13342542 t i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5502651 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29306646 1 + 50890351 t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 938900 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381069 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28593518 1 + 49145316 T i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5439840 1 + 8899380 t i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1648982 1 - 2680843 t i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 395822 1 - 4471408 t i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 604551 1 + 2501019 T i proCoq1.NW_012149263v1 C 0 I 550 s otoGar3.GL873654 5518037 1 + 5549422 t i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111132682 1 - 145441459 T i mm10.chr7 C 0 C 0 s canFam3.chr1 4648936 1 - 122678785 t i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 385112 1 + 643850 T i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3990064 225 - 30143674 I a score=769948.000000 s hg38.chr19_GL383574v1_alt 116484 66 + 155864 ggagaaggctg--ttcttgagctgagtactgtgggaaaa---ag----taagtccagtgccacagcaagagggga s panTro5.chr19 36184116 66 + 61309027 ggagaaggctg--ttcttgagctgagtactgtgggaaaa---ag----taagtccagtgccacagcaagagggga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928363 66 + 64411610 ggagaaggctg--ttcttgagctgagtactgtgggaaaa---ag----taagtccagtgccacagcaagagggga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340052 65 - 8369475 gg-gaaggctg--ttcttgagctgagtactgtgggaaaa---ag----taagtccagtgccacagcaagagggga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937347 66 - 106955855 ggagaaggctg--ttcttgagctgagtactgtgggaaaa---ag----taagtccagtgccacagcaagagggga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252178 66 + 53671032 ggagaaggctg--ttcttgagctgagtaccgtgggaaaa---ag----taagtccagtgccacagcaagagggga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34706087 66 + 59248254 ggagaaggctg--ttcttgagctgagtaccgtgggaaaa---ag----taagtccagtgccacagcaagagggga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4578200 66 - 13342542 ggagaaggctg--ttcttgagctgagtaccgtgggaaaa---ag----taagtccagtgccacagcaagagggga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5502652 66 + 7714307 ggagaaggctg--ttcttgagctgagtaccgtgggaaaa---ag----taagtccagtgccacagcaagagggga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29306647 66 + 50890351 ggagaaggctg--ttcttgagctgagtacggtgggaaaa---ag----taagtccagtgccacagcaagagggga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 938901 66 - 2385121 ggagaaggccg--ttcttgagctgagtaccgtgggaaaa---ag----taagtccagtgccacagcaagagggga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381070 62 + 4274983 ggagaaggctg--ttcttgagctgagtaccgtgggaaa-----------aagtccagtgccacagcaagagggga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28593519 66 + 49145316 GGAGAAAGCTG--TTCTTGAGCTGAGTACTGTGGGAAAA---GG----TAAGTCCAGCTCTATAGCAAGAAGGGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5439841 66 + 8899380 ggagaaggctg--gtcttgagctgagtactgtgggaaaa---gg----taagtccagcactttagcaagaagggt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1648983 66 - 2680843 ggagaaggctg--ttcttgagctgagtactgtggtaaaa---gg----taagtccagcactatagcaagaagggt i cebCap1.NW_016107633v1 C 0 I 303 s aotNan1.NW_018505377v1 395823 66 - 4471408 ggagaaggctg--ttcttgagctgagtactgtgggaaaa---gg----taagtccagcactatagcaagaagggt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5518038 58 + 5549422 ----ggagctgaattcttgagctgaatactatgggaaaa---gg----ttgg------aacccagcaagggggag i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111132683 66 - 145441459 GAAGAACGTTG--AGCTT-AGCTGA-TAGCGTGGGGAGAGTCAG----TGACTCCAGC-TCATTGTAAGAACAGA i mm10.chr7 C 0 C 0 s canFam3.chr1 4648937 66 - 122678785 ggagaaggatg--ggcttcagctgagtacgctgggaaag---ca----ttagtacagcaccacagtaaggggaaa i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 385113 53 + 643850 -------------------GGAGAAGTACTGTGAGAAAA---AGTGAATGAGTCCAGCACCACAGTAAAGGGAGA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 604552 550 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I a score=520927.000000 s hg38.chr19_GL383574v1_alt 116550 43 + 155864 ggactctt-gggcaggggcatgacacgtccaaaggtgtggaggt s panTro5.chr19 36184182 43 + 61309027 ggactctt-gggcaggggcatgacacgtccaaaggtgtggaggt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928429 43 + 64411610 ggactctt-gggcaggggcatgacacgtccaaaggtgtggaggt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340117 43 - 8369475 ggactctt-gggcaggggcatgacacgtccaaaggtggggaggt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937413 43 - 106955855 ggactctt-gggcaggggcatgacatgtccaaaggtgtggaggt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252244 43 + 53671032 ggactctt-gggcaggggcatgacacgtccaaaggtgtgaaggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34706153 43 + 59248254 ggactctt-gggcaggggcatgacacgtccaaaggtgtgaaggt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4578266 43 - 13342542 ggactctt-gggcaggggcatgacacgtccaaaggtgtgaaggt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5502718 43 + 7714307 ggactctt-gggcaggggcatgacacgtccaaaggtgtgaaggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29306713 43 + 50890351 ggactctt-gggcaggggcatgacacgtccaaaggtgtgaaggt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 938967 43 - 2385121 ggactctt-gggcaggggcatgacacgtctaaaggtgtgaaggt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381132 43 + 4274983 ggactctt-gggcaggggcatgacacgtccaaaggtgtgaaggt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28593585 42 + 49145316 GGACTCTT-GGGCATGGGCAGGACA-GTCCAAAGGTATGGAGAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5439907 43 + 8899380 ggactctt-gggcatgggcaggacatgtccaaaggtgtggagat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1649352 43 - 2680843 ggactctt-gggcatgggcaggacatgtccaaaggtgtggagat i cebCap1.NW_016107633v1 I 303 C 0 s aotNan1.NW_018505377v1 395889 43 - 4471408 ggactctt-gggcatgggcaggacatgtccaacggtgtggagat i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5518097 21 + 5549422 ggactctt-aggctagg------catgt---------------- i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111132749 43 - 145441459 GGATACTT-AGACAGGATGGTGACATGAGTAAAGCTGTAGAGAT i mm10.chr7 C 0 C 0 s canFam3.chr1 4649003 43 - 122678785 ggactttt-aaggagggccatgacaagtacaaaggcatagaggt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 385166 44 + 643850 GGACTTTTCAGGTATGGGTGTCACATGTACCAAGGTATACATGT i dasNov3.JH563638 C 0 I 7 e proCoq1.NW_012149263v1 604552 550 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I a score=300208.000000 s hg38.chr19_GL383574v1_alt 116593 23 + 155864 gagagcaagcatgaggtatttga s panTro5.chr19 36184225 23 + 61309027 gagagcaagcatgaggtatttga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928472 23 + 64411610 gagagcaagcatgaggtatttga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340160 23 - 8369475 gagagcaagcatgaggtatttga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937456 23 - 106955855 gagagcaagcatgaggtatttga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252287 23 + 53671032 gagagcaagcatgaggtgtttga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34706196 23 + 59248254 gagagcaagcatgaggtgtttga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4578309 23 - 13342542 gagagcaagcatgaggtgtttga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5502761 23 + 7714307 gagagcaagcatgaggtatttga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29306756 23 + 50890351 gagagcaagcatgaggtatttga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939010 23 - 2385121 gagagcgagcatgaggtatttga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381175 23 + 4274983 gagagcaagcatgaggtatttga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28593627 23 + 49145316 GAGAGCAAGCATGAGGTATTTGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5439950 23 + 8899380 gagagcaagcatgaggtatttga i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1649395 23 - 2680843 gagagcaagcatgaggtatttga i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 395932 23 - 4471408 gagagcaagcatgaggtatttga i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5518118 19 + 5549422 ----acaagcttcagatatttga i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111132792 21 - 145441459 GA--GCAAGCCTGGGGAATATAA i mm10.chr7 C 0 I 2347 s canFam3.chr1 4649046 21 - 122678785 ga--gcaagcatgaggtttgtga i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 604552 550 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I a score=241683.000000 s hg38.chr19_GL383574v1_alt 116616 20 + 155864 gctgcaggagattgagggta s panTro5.chr19 36184248 20 + 61309027 gctgcaggagattgagggta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928495 20 + 64411610 gctgcaggagattgagggta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340183 20 - 8369475 gctgcaggagattgagggta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937479 20 - 106955855 actgctggagattgagggta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252310 20 + 53671032 gctgcaggagattgagggta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34706219 20 + 59248254 gctgcaggagattgagggta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4578332 20 - 13342542 gctgcaggagattgagggta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5502784 20 + 7714307 gctgcaggagattgagggta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29306779 20 + 50890351 gctgcaggagattgagggta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939033 20 - 2385121 gctgcaggagattgagggta i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381198 20 + 4274983 gctgcagaagattgagggta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28593650 20 + 49145316 GCGGTAGGAGATTTAGGGTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5439973 20 + 8899380 gCTGTAGGAGATTTAGGGTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1649418 20 - 2680843 gctgtaggagatttagggta i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 395955 20 - 4471408 gCTGTGGGAGATTTAGGGTA i aotNan1.NW_018505377v1 C 0 I 303 s otoGar3.GL873654 5518137 20 + 5549422 gttacaggaaatttagggta i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4649067 20 - 122678785 accgtaggagttttagggta i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 604552 550 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I a score=26159.000000 s hg38.chr19_GL383574v1_alt 116636 7 + 155864 gagtctg s panTro5.chr19 36184268 7 + 61309027 gagtctg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928515 7 + 64411610 gagtctg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340203 7 - 8369475 gagtctg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937499 7 - 106955855 gagtctg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252330 7 + 53671032 gagtctg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34706239 7 + 59248254 gagtctg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4578352 7 - 13342542 gagtctg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5502804 7 + 7714307 gagtctg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29306799 7 + 50890351 gagtctg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939053 7 - 2385121 gagtctg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381218 7 + 4274983 gagtctg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28593670 2 + 49145316 -AA---- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5439993 2 + 8899380 -AA---- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1649438 2 - 2680843 -aa---- i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5518157 7 + 5549422 aagggcg i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4649087 7 - 122678785 aagggtg i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 604552 550 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e aotNan1.NW_018505377v1 395975 303 - 4471408 I a score=908147.000000 s hg38.chr19_GL383574v1_alt 116643 79 + 155864 gacaggtatgaata-aggagtagagggaaatgacatt-----ggaaagTGGGAGCAGTCCTT---GAAATAACTAATAACAATGTCTA s panTro5.chr19 36184275 79 + 61309027 gacaggtatgaata-aggagtagagggaaacgacatt-----ggaaagTGGGAGCAGTCCTT---GAAATAACTAATAACAATGTCTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928522 79 + 64411610 gacaggtatgaata-aggagtagagggaaacgacatt-----ggaaagTGGGAGCAGTCCTT---GAAATAACTAATAACAATGTCTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340210 79 - 8369475 gacaggtatgaata-aggagtagagggaaatgacatt-----ggaaagTGGGAGCAGTCCTT---GAAATAACTAATAACAATGTCTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937506 79 - 106955855 gacagatatgaata-aggagtagagggaaatgacatt-----ggaaagTGGGAGCAGTCCTT---GGAATAACTAATAACAATATCTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252337 79 + 53671032 gacaggtgtgaata-agcagtagagggaaatgacatt-----ggaaagtgggaccagTCCTT---GAAATAACTGATAACAATGTCTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34706246 79 + 59248254 gacaggtgtgaata-agcagtagagggaaatgacatt-----ggaaagtgggaccagTCCTT---GAAATAACTGATAACAATGTCTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4578359 79 - 13342542 gacaggtgtgaata-agcagtagagggaaatgacatt-----ggaaagtgggaccagTCCTT---GAAATAACTGATAACAATGTCTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5502811 79 + 7714307 gacaggtgtgaata-aggagtagagggaaatgacatt-----ggaaagtgggaccagTCCTT---GAAATAACTGATAACAATGTCTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29306806 79 + 50890351 gacaggtaggaata-aggagtagagggaaatgacatt-----ggaaagtgggaccagTCCTT---GAAATAACTGATAACAATATCTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939060 79 - 2385121 gacaggtgtgaata-aggagtagagggaaatgacatt-----ggaaagtgggaccagTCCTT---GAAATAACTGATAACAATGTCTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381225 79 + 4274983 gacaggtatgaata-aggagtagagggaaatgacatt-----ggaaagtgagaccagTCCTT---GAAATAACTAATAACAATGTCTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28593672 79 + 49145316 GACAGGAATGAATA-AGGAATAGAGAGAAATGACATT-----GGAAAGTGGGACCAATCCTT---GAAATAACTAATAACAGTGTCTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5439995 79 + 8899380 AACAGGTATGAATA-AGGAATAGAGAGAAATTACATT-----GGAAAGTGGGACCAATCCTT---GAAATAACTAATAACAGTGTCTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1649440 79 - 2680843 gacaggtataaata-aggagtagagagaaatgacatt-----ggaaagtgggaccaatcctt---gaAATAACTAATAACAATGTCTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 396278 76 - 4471408 GACAGATATGAATA-AGGAATAGAGAGAAATGACATT-----GGAAAGTGGGACCAATCCTT---GAAATAAC---TAACAGTGTCTA i aotNan1.NW_018505377v1 I 303 C 0 s otoGar3.GL873654 5518164 85 + 5549422 gacaggtatgacta---gagtagagggaaatgagattggaaaggaaagtgggaccagctcttgaagAAATAATCGATATAAAAATGTA i otoGar3.GL873654 C 0 I 4 s canFam3.chr1 4649094 88 - 122678785 gacaattatgaatatggaagtggaaggaaatgggattggggaggaaagtggggccagctcttaaagAAATAATTAATGATGATATGTA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 604552 550 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I a score=1318573.000000 s hg38.chr19_GL383574v1_alt 116722 105 + 155864 ----ACTGGGCACTAACAGCACTTCAGGT----CCTGTGCTGAGTCCTTCGActcactgcgctaaccaggtttgatgctgagagctttgtc----------------------------------tacattgcattgtttaatcctc s panTro5.chr19 36184354 105 + 61309027 ----ACTGGGCACTAACAGCACTTCAGGT----CCTGTGCTGAGTCCTTCGActcactgcgctaaccaggtttgatgctgagagctttgtc----------------------------------tacattgcattgtttaatcctc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928601 105 + 64411610 ----ACTGGGCACTAACAGCACTTCAGGT----CCTGTGCTGAGTCCTTCGActcactgcgctaaccaggtttgatgctgagagctttgtc----------------------------------tacattgcattgtttaatcctc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340289 105 - 8369475 ----ACTGGGCACTAACAGCACTTCAGGT----CCTGTGCTGAGTCCTTCGActcactgcgctaaccaggtttgatgctgagagctttgtc----------------------------------tacattgcattgtttaatcctc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937585 105 - 106955855 ----ACCGGGCACTAACAGCACTTCAGGT----CCTGTGCTGAGTCCTTCGActcactgcgctaaccaggtttgatgctgagagctttgtc----------------------------------tatattgcattgtttaatcctc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252416 105 + 53671032 ----ACGGGGCACTAACAGCACTTCAGGT----CCTGTGCTGAGTCCTTCGActcactgtgctaacgaggtttgatgctgagggctttgtc----------------------------------tatattgccttgttcaatcctc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34706325 105 + 59248254 ----ACGGGGCACTAACAGCACTTCAGGT----CCTGTGCTGAGTCCTTCGActcactgtgctaacgaggtttgatgctgagggctttgtc----------------------------------tatattgccttgttcaatcctc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4578438 105 - 13342542 ----ACTGGGCACTAACAGCACTTCAGGT----CCTGTGCTGAGTCCTTCGActcactgtgctaacgaggtttgatgctgagggctttgtc----------------------------------tatattgccttgttcaatcctc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5502890 105 + 7714307 ----ACTAGGCACTAACAGCACTTCAGGT----CCTGTGCTGAGTCCTTCGACTCACTGTGCTAATGAGGTTTGATGctgagggctttgtc----------------------------------tatattgccttgttcaatcctc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29306885 105 + 50890351 ----ACTGGGCACTAACAGCACTTCAGGT----CCTGTGCTGAGTCCTTCGACTCACTGCGCTAATGAGGTTTGATGctgagggctttgtc----------------------------------tatattgccttgtttaatcctc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939139 105 - 2385121 ----ACTAGGCACTAACAGCACTTCAAGT----CCTGTGCTGAGTCCTTCGActcactgtgctaatgaggtttgatgctgagggctttgtc----------------------------------tatattgccttgttcaatcctc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381304 105 + 4274983 ----ACTGGGCACTAACAGCACTTTAGGT----CCTGTGCTGAGTCCTTCGACTCACTGCGCTAACGAGGTTTGATGctgagggctttgtc----------------------------------tatattgccttgtttaatcctc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28593751 105 + 49145316 ----ACTGGGCTCTAACAGCACTTCAGGT----CCTCTGCTGAGTCCTTTGACTCAGTGCTCTAACCAGGTTTGATGCTGAGGACATTGTC----------------------------------TACATTGCCTTGTTTAATTGTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5440074 105 + 8899380 ----ATAGGGCACTAACAGCACCTCAGGT----CCTGTGCTGAGTCCTTTGACTCAGTGCGCTAACCAGGTTTGATGCTGAGGACATTGTC----------------------------------TACATTGCCTTGTTTAATCCTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1649519 105 - 2680843 ----ACTGGGCACTAACAGCACTTCAGGT----CCTGTGCTGAGTCCTTTGACTCAGTGTACTAACCAGGTTTGATGCTGAGGACATTGTC----------------------------------TACATTGCCTTGTTTAATCCTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 396354 105 - 4471408 ----ACTGGGCACTAACAGCACTTCAGGT----CCTGTGCTGAGTCCTTTGACTCAGTACACTAACCAGGTTTGATGCTGAGGACATTGTC----------------------------------TACATTGCTTTGTTTAGTCCTC i aotNan1.NW_018505377v1 C 0 I 872 s proCoq1.NW_012149263v1 605102 105 + 2501019 ----ACTGGGCACTAACAACACTTCAGGT----ACTGTGCTAACCCCTTAGgctcagtgtgctgaccaagtttggcgctaagtgctttgtg----------------------------------tatattgcttcctttaatcctc i proCoq1.NW_012149263v1 I 550 C 0 s otoGar3.GL873654 5518253 143 + 5549422 ----ACTGGGCACTAACAACATTTCAGGTACTAACTATGCTAACCCCTTGGACTCACCATGCTAACCAAGTTTGGTGCTAAGTGCTTTCTGTATATTGTGTCATTTGTTTCTCTCTCTctttttttatattgcttcatttaatcctc i otoGar3.GL873654 I 4 C 0 s canFam3.chr1 4649182 106 - 122678785 ACTTATTGGGCAGTAACAATGTGTCAGTT----ATGATGTCAGTCCCTT---ctcactgtgccagccaggtttggtgccaagtgctttgta----------------------------------tacattactttgtttcatcttc i canFam3.chr1 C 0 C 0 e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I a score=98141.000000 s hg38.chr19_GL383574v1_alt 116827 11 + 155864 acaacaaccct-- s panTro5.chr19 36184459 11 + 61309027 acaacaaccct-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928706 11 + 64411610 acaacaaccct-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340394 11 - 8369475 acaataaccct-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937690 11 - 106955855 acaacaaccct-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252521 11 + 53671032 acaacaaccct-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34706430 11 + 59248254 acaacaaccct-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4578543 11 - 13342542 acaacaaccct-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5502995 11 + 7714307 acaacaaccct-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29306990 11 + 50890351 acaacaaccct-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939244 11 - 2385121 acaacaaccct-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381409 11 + 4274983 acaacaatcct-- i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 605207 11 + 2501019 acaacaaccct-- i proCoq1.NW_012149263v1 C 0 I 60 s otoGar3.GL873654 5518396 11 + 5549422 acaacaatcct-- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4649288 13 - 122678785 acaacaaccctgt i canFam3.chr1 C 0 C 0 e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e aotNan1.NW_018505377v1 396459 872 - 4471408 I e cebCap1.NW_016107633v1 1649624 0 - 2680843 C e saiBol1.JH378197 5440179 0 + 8899380 C e calJac3.chr22 28593856 0 + 49145316 C a score=34292.000000 s hg38.chr19_GL383574v1_alt 116838 5 + 155864 ttgat s panTro5.chr19 36184470 5 + 61309027 ttgat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928717 5 + 64411610 ttgat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340405 5 - 8369475 ttgat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937701 5 - 106955855 ttgaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252532 5 + 53671032 ttgat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34706441 5 + 59248254 ttgat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4578554 5 - 13342542 ttgat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503006 5 + 7714307 ttgat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307001 5 + 50890351 ttgat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939255 5 - 2385121 ttgat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381420 5 + 4274983 ttgat i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5518407 5 + 5549422 atgaT i otoGar3.GL873654 C 0 I 285 s canFam3.chr1 4649301 5 - 122678785 gtgat i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e aotNan1.NW_018505377v1 396459 872 - 4471408 I e cebCap1.NW_016107633v1 1649624 0 - 2680843 C e saiBol1.JH378197 5440179 0 + 8899380 C e calJac3.chr22 28593856 0 + 49145316 C a score=468597.000000 s hg38.chr19_GL383574v1_alt 116843 60 + 155864 gtaggtactTACCTCTGGTATGTGTGGCATCATGTCACATGTCA----CCTGGTAGGTCTCCCT s panTro5.chr19 36184475 60 + 61309027 gtaggtactTACCTCTGGTACGTGTGGCATCATGTCACATGTCA----CCGGGTAGGTCTCCCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928722 60 + 64411610 gtaggtactTACCTCTGGTACGTGTGGCATCATGTCACATGTCA----CCGGGTAGGTCTCCCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340410 60 - 8369475 gtaggtactTACCTCTGGTACGTGTGGCATCATGTCACATGTCA----CCTGGTAGGTCTCCCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937706 58 - 106955855 ataggtactTACCGGTGGTACGTGTGGTAT--TGTCACATGTCA----CCTGGTAGGTCTCCCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252537 60 + 53671032 gtaggtactTACCTCTGGTATGTGTGGCATCATGTCACATGTCA----CCTGGCAGGTCTCTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34706446 60 + 59248254 gtaggtactTACCTCTGGTATGTGTGGCATCATGTCACATGTCA----CCTGGCAGGtttctct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4578559 60 - 13342542 gtaggtactTACCTCTGGTATGTGTGGCATCATGTCACATGTCA----CCTGGTAGGTCTCTGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503011 60 + 7714307 gtaggtactTACCTCTGGTATGTGTGGCATCATGTCACATGTCA----CCTGGCAGGTCTCTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307006 60 + 50890351 gtaggtactTACCTCTGGTATGTGTGGCATCATGTCACATGTCA----CCTGGCAGGTCTCTCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939260 60 - 2385121 gtaggtactTACCTCTGGTATGTGTGGCATCATGTCACATGTCA----CCTGGCAGGTCTCTCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381425 60 + 4274983 gtaggtactTACCTCTGGTATGTGTGGCATCATGTCACATGTCA----CCTGGCAGGTCTCTCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28593856 49 + 49145316 -----CA-----CTTAGGTACATGTGGCAGCATGTCACATGTC-----CCTGGCAGGTCTCTCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5440179 54 + 8899380 -----CACTTACCTTAGGTACATGTGGCAGCATGTCACATGTC-----CCTGGTAGGTCTCTCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1649624 54 - 2680843 -----CACGTACCTTAGGTACATGTGGTAGCATGTCACATGTC-----CCTGGTAGGTCTCTCT i cebCap1.NW_016107633v1 C 0 C 0 s canFam3.chr1 4649306 62 - 122678785 gtaggtGCTTACATT--ACAGGAGAAGTGATACATCCAATGTCAGCTGCCTGGTGATTCAGCCT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e aotNan1.NW_018505377v1 396459 872 - 4471408 I a score=40468.000000 s hg38.chr19_GL383574v1_alt 116903 12 + 155864 G----------------------------------------CCtt---------ttttttt s panTro5.chr19 36184535 12 + 61309027 G----------------------------------------CCtt---------ttttttt i panTro5.chr19 C 0 I 1 s panPan2.chr19 39928782 12 + 64411610 G----------------------------------------CCtt---------ttttttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340470 12 - 8369475 G----------------------------------------CCtt---------ttttttt i gorGor5.CYUI01015150v1 C 0 I 1 s nomLeu3.chr10 63937764 12 - 106955855 G----------------------------------------CCtt---------ttttttt i nomLeu3.chr10 C 0 I 7 s rheMac8.chr19 30252597 12 + 53671032 G----------------------------------------tttt---------ttttttt i rheMac8.chr19 C 0 I 4 s macFas5.chr19 34706506 12 + 59248254 g----------------------------------------tttt---------ttttttt i macFas5.chr19 C 0 I 4 s macNem1.NW_012011689v1 4578619 11 - 13342542 G-----------------------------------------ttt---------ttttttt i macNem1.NW_012011689v1 C 0 I 4 s cerAty1.NW_012005268v1 5503071 21 + 7714307 G----------------------------------------ttttttttttttgttttttt i cerAty1.NW_012005268v1 C 0 I 4 s chlSab2.chr6 29307066 52 + 50890351 Gttttttttttttttttttttttttttgagatttttttttttttt---------ttttttt i chlSab2.chr6 C 0 I 4 s manLeu1.NW_012102454v1 939320 12 - 2385121 G----------------------------------------tttt---------ttttttt i manLeu1.NW_012102454v1 C 0 I 4 s colAng1.NW_012111697v1 2381485 14 + 4274983 G----------------------------------------ttttgt-------ttttttt i colAng1.NW_012111697v1 C 0 I 4 s calJac3.chr22 28593905 12 + 49145316 G----------------------------------------CTTC---------TCTCTCt i calJac3.chr22 C 0 I 21 s saiBol1.JH378197 5440233 12 + 8899380 G----------------------------------------CTTC---------TCTCTCT i saiBol1.JH378197 C 0 M 1683 s cebCap1.NW_016107633v1 1649678 12 - 2680843 G----------------------------------------CTTC---------TGTCTCT i cebCap1.NW_016107633v1 C 0 I 13 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649368 0 - 122678785 C e aotNan1.NW_018505377v1 396459 872 - 4471408 I a score=878705.000000 s hg38.chr19_GL383574v1_alt 116915 127 + 155864 gaaatggaatcttgctctgtcaccctggctgg-aaggcagtggcaggatctcgacttactgcaacctctgcctccctgggttcaagcgattcttctgcctcagcctcccgagtagctaggactacagg s panTro5.chr19 36184548 127 + 61309027 gaaatggaatcttgctctgtcaccctggctgg-aatgcagtggcaggatctcggcttactgcaacctctgcctccctgggttcaagcgattcttctgcctcagcctcccgagtagctaggactacagg i panTro5.chr19 I 1 C 0 s panPan2.chr19 39928794 127 + 64411610 gaaatggaatcttgctctgtcaccctggctgg-aatgcagtggcaggatctcggcttactgcagcctctgcctccctgggttcaagcgattcttctgcctcagcctcccgagtagctaggactacagg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340483 127 - 8369475 gaaatggaatcttgctctgtcaccctggctgg-aatgcagtggcaggatctcggcttactgcaacctctgcctccctgggttcaagcgattcttttgcctcagccccccgagtagctaggactacagg i gorGor5.CYUI01015150v1 I 1 C 0 s nomLeu3.chr10 63937783 127 - 106955855 gagatggaatcttgctctgtcaccctggctgg-aatgcagtggcaggatctcggctcactgcaacctctgcctccccgggttcaagcgattcttctgcctcagcctcccgagtagctaggattacagg i nomLeu3.chr10 I 7 C 0 s rheMac8.chr19 30252613 126 + 53671032 gagatggaatcttgctctgtcaccctggctgg-agtgtagtggcaggctctccgctcactgcaacatccacctccc-gggttcaagtgattcttctgccacagcttcctgagtaactgggactacagg i rheMac8.chr19 I 4 C 0 s macFas5.chr19 34706522 126 + 59248254 gagatggaatcttgctctgtcaccctggctgg-agtgtagtggcaggctctccgctcactgcaacatccacctccc-gggttcaagtgattcttctgccacagcttcctgagtaactgggactacagg i macFas5.chr19 I 4 C 0 s macNem1.NW_012011689v1 4578634 126 - 13342542 gagatggaatcttgctctgtcaccctggctgg-agtgtagtggcaggctctccgctcactgcaacatccacctccc-gggttcaagtgattcttctgccacagcttcctgagtaactgggactacagg i macNem1.NW_012011689v1 I 4 C 0 s cerAty1.NW_012005268v1 5503096 126 + 7714307 gagatggaatcttgctctgtaaccctggctgg-agtgtagtggcaggctctccgctcactgcaacatccacctccc-gggttcaagtgattcttctgccacagcttcctgagtagctgggactacagg i cerAty1.NW_012005268v1 I 4 C 0 s chlSab2.chr6 29307122 126 + 50890351 gagatggaatcttactctgtcgccctggccgg-agtgtagtggcaggctctccgctcactgcaacatccacctccc-gggttcaagtgattcttctgctacagcttcctgagtagctgggactacagg i chlSab2.chr6 I 4 C 0 s manLeu1.NW_012102454v1 939336 126 - 2385121 gagatggaatcttgctctgtcaccctggctgg-agtgtagtggcaggctctccgctcactgcaacatccacctccc-gggttccagtgattcttctgccacagcttcctgagtagctgggactacagg i manLeu1.NW_012102454v1 I 4 C 0 s colAng1.NW_012111697v1 2381503 126 + 4274983 gaggtggaatcttgctctgtcatcctggttgg-agtatagtggcaggctctctgctcactgcaacatccacctccc-gggttcaagtgattcttctgccacagcctcccaagtagctgggactacagg i colAng1.NW_012111697v1 I 4 I 41 s calJac3.chr22 28593938 126 + 49145316 gaggtggagtctctctctgtcacccaggctgc-agtgcaatggtacaatctccgctcactgcaacctctgcctcct-gggtttaagcaattctcctgcctcagcctcccaagtagctgggattacagg i calJac3.chr22 I 21 C 0 s cebCap1.NW_016107633v1 1649703 127 - 2680843 gaggtggagtctctctctgtcacccaggctgcaagtgcaatggtgcaatcgcagctcactgcaacctccgcctcct-gggttcaagcaattctcctgcctcagcctcccatgtagctgggattacagg i cebCap1.NW_016107633v1 I 13 C 0 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649368 0 - 122678785 C e aotNan1.NW_018505377v1 396459 872 - 4471408 I e saiBol1.JH378197 5440245 1683 + 8899380 M a score=433053.000000 s hg38.chr19_GL383574v1_alt 117042 72 + 155864 tgagtgccaccatgcctggctaatttttgtatttgtaatagaggcggggtttcaccatattg------gccaggctgg s panTro5.chr19 36184675 72 + 61309027 tgagtgccaccatgcctggctaatttttgtatttttaatagagacggggtttcaccatattg------gccaggctgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928921 72 + 64411610 tgagtgccaccatgcctggctaatttttgtatttttaatagagacggggtttcaccatattg------gccaggctgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340610 72 - 8369475 tgagtgccaccatgcctggctaatttttgtatttttaatagagacggggtttcaccatattg------gccaggctgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937910 72 - 106955855 tgagtgccaccatgcctggctaatttttgtatttttaatagagacggggtttcaccatattg------gccaggctgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252739 72 + 53671032 cgagtgccaccatgcccggcttatttttgtattttcagtagagacagggtttcaccatattg------gccaggctga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34706648 72 + 59248254 cgagtgccaccatgcccggcttatttttgtattttcagtagagacagggtttcaccatattg------gccaggctga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4578760 72 - 13342542 cgagtgccaccatgcccggcttatttttgtattttcagtagagacagggtttcaccatattg------gccaggctga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503222 72 + 7714307 cgagtgccaccatgcccggtttatttttgtattttcagtagagacagggtttcaccatattg------gccaggctga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307248 72 + 50890351 cgagtgccaccatgcccggcttatttttgtattttcagtagagatagggtttcaccatattg------gccaggctgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939462 72 - 2385121 cgagtgccaccatgcctggtttatttttgtattttcagtagagactgggtttcaccatattg------gccaggctga i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28594064 77 + 49145316 catgcacaaccacgcctggctaatttttgt-tttttttttgagacagagtctcgttctgttgccaggtggcaggctgg i calJac3.chr22 C 0 I 51 s cebCap1.NW_016107633v1 1649830 72 - 2680843 catgcgccaccatgcctggctaatttttgtatttttaatagagatggggtttcaccatattg------gccaggctgg i cebCap1.NW_016107633v1 C 0 C 0 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649368 0 - 122678785 C e aotNan1.NW_018505377v1 396459 872 - 4471408 I e saiBol1.JH378197 5440245 1683 + 8899380 M e colAng1.NW_012111697v1 2381629 41 + 4274983 I a score=93125.000000 s hg38.chr19_GL383574v1_alt 117114 18 + 155864 tcttgaactccttacctt s panTro5.chr19 36184747 18 + 61309027 tcttgaactccttacctt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39928993 18 + 64411610 tcttgaactccttacctt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340682 18 - 8369475 tcttgaactccttacctt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63937982 18 - 106955855 tcttgaactccttacctt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252811 18 + 53671032 tctcgaactcctgacctc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34706720 18 + 59248254 tctcgaactcctgacctc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4578832 18 - 13342542 tctcgaactcctgacctc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503294 18 + 7714307 tctcgaactcctgacctc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307320 18 + 50890351 tctcgaacccgtgacctc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939534 18 - 2385121 tctcgaactcctgacctc i manLeu1.NW_012102454v1 C 0 C 0 s cebCap1.NW_016107633v1 1649902 18 - 2680843 tcttgaactcctgacctc i cebCap1.NW_016107633v1 C 0 I 2 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649368 0 - 122678785 C e aotNan1.NW_018505377v1 396459 872 - 4471408 I e saiBol1.JH378197 5440245 1683 + 8899380 M e calJac3.chr22 28594141 51 + 49145316 I e colAng1.NW_012111697v1 2381629 41 + 4274983 I a score=331694.000000 s hg38.chr19_GL383574v1_alt 117132 54 + 155864 gtgatccgcccaccttggtctcccaaagtgctgggattacaggagtgagccacc s panTro5.chr19 36184765 54 + 61309027 gtgatctgcccaccttggtctcccaaagtgctgggattacaggagtgagccacc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929011 54 + 64411610 gtgatctgcccaccttggtctcccaaagtgctgggattacaggagtgagccacc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340700 54 - 8369475 gtgatccgcccaccttggtctcccaaagtgctgggattacaggagtgaaccacc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938000 54 - 106955855 gtgatccgcccaccttggcctcccagagtgctgggattacaggtgtgagccacc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252829 54 + 53671032 gtgatccacccacctcggcctctcaaagtgctggaattacaggcgtgagccacc i rheMac8.chr19 C 0 I 15 s macFas5.chr19 34706738 54 + 59248254 gtgatccgcccacctcggcctctcaaagtgctggaattacaggcgtgagccacc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4578850 54 - 13342542 gtgatccgcccacctcggcctctcaaagtgctggaattacaggcgtgagccacc i macNem1.NW_012011689v1 C 0 I 15 s cerAty1.NW_012005268v1 5503312 54 + 7714307 gtgatccgcccacctcagcctctcaaagtgctggaattacaggcgtgaaccacc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307338 54 + 50890351 gtgatccgcccacctcggcctctcaaagtgctggaattacaggtgtgagccacc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939552 54 - 2385121 gtgatccgcccacctcggcctctcaaagtgctggaattacaggcgtgaaccacc i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28594192 54 + 49145316 gcaattctcctgccttagcctcccaagtagctgggactacagacgcgcgccacc i calJac3.chr22 I 51 C 0 s cebCap1.NW_016107633v1 1649922 54 - 2680843 gtgatccacttgccctggcctcccaaagtgctgggattacaggcatgagccacc i cebCap1.NW_016107633v1 I 2 C 0 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649368 0 - 122678785 C e aotNan1.NW_018505377v1 396459 872 - 4471408 I e saiBol1.JH378197 5440245 1683 + 8899380 M e colAng1.NW_012111697v1 2381629 41 + 4274983 I a score=-323.000000 s hg38.chr19_GL383574v1_alt 117186 3 + 155864 atg s panTro5.chr19 36184819 3 + 61309027 atg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929065 2 + 64411610 AT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340754 3 - 8369475 atg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938054 3 - 106955855 acg i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29307392 3 + 50890351 gtg i chlSab2.chr6 C 0 I 48 s manLeu1.NW_012102454v1 939606 3 - 2385121 gcg i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28594246 3 + 49145316 aca i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1649976 3 - 2680843 ttg i cebCap1.NW_016107633v1 C 0 C 0 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649368 0 - 122678785 C e aotNan1.NW_018505377v1 396459 872 - 4471408 I e saiBol1.JH378197 5440245 1683 + 8899380 M e colAng1.NW_012111697v1 2381629 41 + 4274983 I e cerAty1.NW_012005268v1 5503366 0 + 7714307 C e macNem1.NW_012011689v1 4578904 15 - 13342542 I e macFas5.chr19 34706792 0 + 59248254 C e rheMac8.chr19 30252883 15 + 53671032 I a score=1500.000000 s hg38.chr19_GL383574v1_alt 117189 1 + 155864 c s panTro5.chr19 36184822 1 + 61309027 c i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340757 1 - 8369475 c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938057 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28594249 1 + 49145316 c i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1649979 1 - 2680843 c i cebCap1.NW_016107633v1 C 0 C 0 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e chlSab2.chr6 29307395 48 + 50890351 I e canFam3.chr1 4649368 0 - 122678785 C e aotNan1.NW_018505377v1 396459 872 - 4471408 I e saiBol1.JH378197 5440245 1683 + 8899380 M e colAng1.NW_012111697v1 2381629 41 + 4274983 I e manLeu1.NW_012102454v1 939609 0 - 2385121 C e cerAty1.NW_012005268v1 5503366 0 + 7714307 C e macNem1.NW_012011689v1 4578904 15 - 13342542 I e macFas5.chr19 34706792 0 + 59248254 C e rheMac8.chr19 30252883 15 + 53671032 I e panPan2.chr19 39929067 0 + 64411610 C a score=-7674.000000 s hg38.chr19_GL383574v1_alt 117190 13 + 155864 ccagcTGCTGC--------------------tt s panTro5.chr19 36184823 13 + 61309027 ccagcTGCTGC--------------------tt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929067 22 + 64411610 -----------NNNNNNNNNNNNNNNNNNNNtt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340758 13 - 8369475 ccagcTGCTGC--------------------tt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938058 13 - 106955855 ccagcTGCTGC--------------------tt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34706792 10 + 59248254 ---gcgcTGGC--------------------CT i macFas5.chr19 C 0 I 5 s cerAty1.NW_012005268v1 5503366 10 + 7714307 ---gcgctggc--------------------cT i cerAty1.NW_012005268v1 C 0 I 6 s manLeu1.NW_012102454v1 939609 7 - 2385121 ------cTGGC--------------------CT i manLeu1.NW_012102454v1 C 0 I 7 s calJac3.chr22 28594250 7 + 49145316 ccagcta-------------------------- i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e chlSab2.chr6 29307395 48 + 50890351 I e canFam3.chr1 4649368 0 - 122678785 C e aotNan1.NW_018505377v1 396459 872 - 4471408 I e cebCap1.NW_016107633v1 1649980 0 - 2680843 C e saiBol1.JH378197 5440245 1683 + 8899380 M e colAng1.NW_012111697v1 2381629 41 + 4274983 I e macNem1.NW_012011689v1 4578904 15 - 13342542 I e rheMac8.chr19 30252883 15 + 53671032 I a score=-1331.000000 s hg38.chr19_GL383574v1_alt 117203 9 + 155864 ttttttttt s panTro5.chr19 36184836 9 + 61309027 ttttttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929089 9 + 64411610 ttttttttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340771 9 - 8369475 ttttttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938071 9 - 106955855 ttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252898 8 + 53671032 -TATGAATT i rheMac8.chr19 I 15 I 5 s macFas5.chr19 34706807 8 + 59248254 -TATGAATT i macFas5.chr19 I 5 I 5 s macNem1.NW_012011689v1 4578919 8 - 13342542 -TATGAATT i macNem1.NW_012011689v1 I 15 I 5 s cerAty1.NW_012005268v1 5503382 7 + 7714307 --ATGAATT i cerAty1.NW_012005268v1 I 6 I 6 s manLeu1.NW_012102454v1 939623 6 - 2385121 ---TGAATT i manLeu1.NW_012102454v1 I 7 I 7 s calJac3.chr22 28594257 1 + 49145316 ------a-- i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e chlSab2.chr6 29307395 48 + 50890351 I e canFam3.chr1 4649368 0 - 122678785 C e aotNan1.NW_018505377v1 396459 872 - 4471408 I e cebCap1.NW_016107633v1 1649980 0 - 2680843 C e saiBol1.JH378197 5440245 1683 + 8899380 M e colAng1.NW_012111697v1 2381629 41 + 4274983 I a score=85294.000000 s hg38.chr19_GL383574v1_alt 117212 30 + 155864 ttttttttttttttttt----gaggcggagtctc s panTro5.chr19 36184845 22 + 61309027 ttttttttt------------gaggcggagtctc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929098 25 + 64411610 ttttttttt-----tag----taggcggagtctc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340780 26 - 8369475 ttttttttt----tttt----gaggcggagtctc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938080 24 - 106955855 ttttttttt------tt----gagtcggagtctc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252911 26 + 53671032 ttttttttt----tttg----gaggcagagtgtc i rheMac8.chr19 I 5 C 0 s macFas5.chr19 34706820 26 + 59248254 ttttttttt----tttg----gaggcagagtgtc i macFas5.chr19 I 5 C 0 s macNem1.NW_012011689v1 4578932 26 - 13342542 ttttttttt----tttg----gaggcagagtctc i macNem1.NW_012011689v1 I 5 C 0 s cerAty1.NW_012005268v1 5503395 26 + 7714307 ttttttttt----tttt----gaggcagagtctc i cerAty1.NW_012005268v1 I 6 C 0 s manLeu1.NW_012102454v1 939636 26 - 2385121 ttttttttt----tttt----gaggccgagtctc i manLeu1.NW_012102454v1 I 7 C 0 s colAng1.NW_012111697v1 2381670 26 + 4274983 ttttttttt----tttt----gaggccaaatctc i colAng1.NW_012111697v1 I 41 C 0 s calJac3.chr22 28594258 24 + 49145316 ttttttata----ttttagtagagacgg------ i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e chlSab2.chr6 29307395 48 + 50890351 I e canFam3.chr1 4649368 0 - 122678785 C e aotNan1.NW_018505377v1 396459 872 - 4471408 I e cebCap1.NW_016107633v1 1649980 0 - 2680843 C e saiBol1.JH378197 5440245 1683 + 8899380 M a score=766618.000000 s hg38.chr19_GL383574v1_alt 117242 133 + 155864 tctctcacccaggctggaatgcagtagtgcgatctcagctcattgcaacctccacctcctgggtcgaagcaattctcctgccttggcctcccaagtagctgggattacaggcatgcgtcaccacgcccagcta- s panTro5.chr19 36184867 133 + 61309027 tctctcacccaggctggaatgcagtggtgcgatctcagctcattgcaaccttcacctcctgggtcgaagcaattctcctgcctcggcctcccaagtagctgggattacaggcatgcgtcaccacgcccagcta- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929123 133 + 64411610 tctctcacccaggctggaatgcagtggtgcgatctcagctcattgcaacctccacctcctgggtcgaagcaattctcctgcctcggcctcccaagtagctgggattacaggcatgcgtcaccacgcccagcta- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340806 132 - 8369475 tctctcacccaggctggaatgcagtggtgcgatctcagctcattgcaa-ctccacctcctgggtcgaagcaattctcctgcctcagcctcccaagtagctgggattacaggcatgtgtcaccacgcccagcta- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938104 133 - 106955855 cctctcacccaggctggagtgcagtggtgcgatctcagctcattgcaacctccacctcctgggttgaagcaattctcctgcctcggactcccaagtagctgggattacaggcatgcgtcaccacgcccagcta- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30252937 133 + 53671032 tctctcacccaggctggagtacagtggcacgatctcagctcattgcaacctccacctcctgggttgaagtgattctcctgccttggcctcccaagtagctgcaattacacgtatgcaccaccatgtccagcta- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34706846 133 + 59248254 tctctcacccaggctggagtacagtggcacgatctcagctcattgcaacctccacctcctgggttgaagtgattctcctgccttggcctcccaagtagctgcgattacacgtatgcaccaccatgcccagcta- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4578958 133 - 13342542 tctctcacccaggctggagtacagtggcacgatctcagcttattgcaacctccacctcctgggttgaagtgattctcctgccttggcctcccaagtagctgcgattacacgtatgcaccaccatgcccagcta- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503421 133 + 7714307 tctctcacccaggctggagtacagtggcgtgatctcagctcattgcaacctccacctcctgggttgaagtgattctcctgccttggcctcccaagtagctgggattacaggtatgcaccaccatgcccggcta- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307443 133 + 50890351 tctctcacccaggctggagtacagtggcgcaatctcagctcattgcaacctccacctcctgggttgaagtgattctcctgccttggcctcccaagtagctgcgattacaggtatgcatcaccatgcccggcta- i chlSab2.chr6 I 48 C 0 s manLeu1.NW_012102454v1 939662 133 - 2385121 tctctcacccaggctggggtacagtggcgtgatctcagctcattgcaacctccacctgctgggttgaagtgattctcctgccttggcctcccaagtagctgggattacaggtatgcaccaccatgcccggcta- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381696 133 + 4274983 tctctcacccaggctggagtacagtggcgcaatctcagctcattgcaacctccacctcctgggttgaagtgattctcctgcctcggccttccaagtagttgggattacaggtatgcgccaccatgcccggcta- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594282 93 + 49145316 --------ccaggatggtct---------tgatct--------------cttgacctc----------gttatctgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccta i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649368 0 - 122678785 C e aotNan1.NW_018505377v1 396459 872 - 4471408 I e cebCap1.NW_016107633v1 1649980 0 - 2680843 C e saiBol1.JH378197 5440245 1683 + 8899380 M a score=938638.000000 s hg38.chr19_GL383574v1_alt 117375 127 + 155864 atttttgtattt------------------------ttagtagagat-ggggtttcaccatattggctaggctggtctggaactcctgacctcaggtgatccgcctgccttggcctcccaaggtgctgggattgtaggcgtgagtcacctcg s panTro5.chr19 36185000 127 + 61309027 atttttgtattt------------------------ttagtagagat-ggggtttcaccatattggctaggctggtctcgaactcctgacctcaggtgatccgcctgccttggcctcccaaggtgctgggattgtaggcgtgagtcacctcg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929256 127 + 64411610 atttttgtattt------------------------ttagtagagat-ggggtttcaccatattggctaggctggtctcgaactcctgacctcaggtgatccgcctgccttggcctcccaaggtgctgggattgtaggcgtgagtcacctca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6340938 127 - 8369475 atttttgtattt------------------------ttagtagagat-ggagtttcaccatattggctaggctggtctcgaactcctaacctcaggtgatccgcttgccttggcctcccaaggtgctgggattgtaggcgtgagtcacctcg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938237 127 - 106955855 atttttgtatgt------------------------ttagtagagat-ggggtttcaccatattggctaggctggtcttgaactcctgacctcaggtgatccgcctgccttggcctcccaaggtgctgggattataggcatgagccacctct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253070 128 + 53671032 atttttatattt------------------------ttagtagagatgggggtttcactgtattggctaggctggtttcgaactcctgacctcaggcgatccgtccgccttggcctcccaaagtgctgggattataggcgagagccacctca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34706979 128 + 59248254 atttttatattt------------------------ttagtagagatgggggtttcactgtattggctaggctggtttcgaactcctgacctcaggcgatccgcccgccttggcctcccaaagtgctgggattataggcgagagccacctca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579091 128 - 13342542 atttttatattt------------------------ttagtagagatgggggtttcactgtattggctaggctggtttcgaactcctgacctcaggcgatccgcccgccttggcctcccaaagtgctgggattataggcgagagccacctca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503554 128 + 7714307 atttttatattt------------------------ttagtagagacgggggtttcactgtattggctaggctggtttcgaactcctgacctcaggtgatccgcccgccttggcctcccaaagtgctgggattataggcgagagccacctca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307576 128 + 50890351 atttttatattt------------------------ttagtagagacgggggtttcactgtattggctaggctggtttcgaactcctgacctcaggtgatccgcctgccttggcctcccaaagtgctgggattataggcgagagccgcctca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939795 128 - 2385121 atttttatattt------------------------ttagtagagacgggggtttcactgtattggctaggctggtttcgaactcctgacctcaggtgatccgcccgccttggcctcccaaagtgctgggattacaggcttgagccactgcg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381829 152 + 4274983 atttttatatttttagtaaagatgggggtttcactgttagtagagacgggggtttcactgtattggctaggctgattttgaactcctgacctcaggtgatccgcccgccttggcctcccaaagtgctgggattataggcatgagccacctca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594375 127 + 49145316 acttttgtattt------------------------ttaatagaaat-ggggtttcaccatattggccaggctggttttgaactcctgacctcaggtgatccacttgccttggactcccaaagtgctgggattacaggtgtgagccaccttg i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 397331 127 - 4471408 atttttgtattt------------------------ttaatagagat-ggggtttcaccatattggccaggctggtcttgaactcctgacctcaggtgatccacttgccttggcctcccaaagtgctaggattacaggcgtgagccaccttg i aotNan1.NW_018505377v1 I 872 C 0 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385210 7 + 643850 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649368 0 - 122678785 C e cebCap1.NW_016107633v1 1649980 0 - 2680843 C e saiBol1.JH378197 5440245 1683 + 8899380 M a score=10500.000000 s hg38.chr19_GL383574v1_alt 117502 1 + 155864 c s panTro5.chr19 36185127 1 + 61309027 c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929383 1 + 64411610 c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341065 1 - 8369475 c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938364 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253198 1 + 53671032 c i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707107 1 + 59248254 c i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579219 1 - 13342542 c i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503682 1 + 7714307 c i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307704 1 + 50890351 c i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939923 1 - 2385121 c i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381981 1 + 4274983 c i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594502 1 + 49145316 c i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 397458 1 - 4471408 c i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 385217 1 + 643850 C i dasNov3.JH563638 I 7 C 0 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649368 0 - 122678785 C e cebCap1.NW_016107633v1 1649980 0 - 2680843 C e saiBol1.JH378197 5440245 1683 + 8899380 M a score=62535.000000 s hg38.chr19_GL383574v1_alt 117503 6 + 155864 ctggcc s panTro5.chr19 36185128 6 + 61309027 ctggcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929384 6 + 64411610 ctggcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341066 6 - 8369475 ctggcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938365 6 - 106955855 ctggcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253199 6 + 53671032 ctggcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707108 6 + 59248254 ctggcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579220 6 - 13342542 ctggcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503683 6 + 7714307 ctggcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307705 6 + 50890351 ctggcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939924 6 - 2385121 ctggcc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381982 6 + 4274983 ctggcc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594503 6 + 49145316 ctggcc i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1649980 6 - 2680843 ctggcc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 397459 6 - 4471408 ctggcc i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 385218 6 + 643850 CAGTTC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 605218 60 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649368 0 - 122678785 C e saiBol1.JH378197 5440245 1683 + 8899380 M a score=25976.000000 s hg38.chr19_GL383574v1_alt 117509 2 + 155864 TC s panTro5.chr19 36185134 2 + 61309027 TC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929390 2 + 64411610 TC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341072 2 - 8369475 TC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938371 2 - 106955855 TC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253205 2 + 53671032 TC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707114 2 + 59248254 TC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579226 2 - 13342542 TC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503689 2 + 7714307 TC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307711 2 + 50890351 TC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939930 2 - 2385121 TC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2381988 2 + 4274983 TC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594509 2 + 49145316 TC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1649986 2 - 2680843 TC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 397465 2 - 4471408 TC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 605278 2 + 2501019 TC i proCoq1.NW_012149263v1 I 60 C 0 s dasNov3.JH563638 385224 2 + 643850 TC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3990064 225 - 30143674 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649368 0 - 122678785 C e saiBol1.JH378197 5440245 1683 + 8899380 M a score=194377.000000 s hg38.chr19_GL383574v1_alt 117511 18 + 155864 TGCTTCTTGATTCAGCCT s panTro5.chr19 36185136 18 + 61309027 TGCTTCTTGATTCAGCCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929392 18 + 64411610 TGCTTCTTGATTCAGCCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341074 18 - 8369475 TGCTTCTTGATTCAGCCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938373 18 - 106955855 TGCTTCTTGATTCAGCCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253207 18 + 53671032 TGCTTCTTGATTCAGCCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707116 18 + 59248254 TGCTTCTTGATTCAGCCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579228 18 - 13342542 TGCTTCTTGATTCAGCCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503691 18 + 7714307 TGCTTCTTGATTCAGCCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307713 18 + 50890351 TGCTTCTTGATTCAGCCT i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2381990 18 + 4274983 TGCTTCTTGATTCAGCCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594511 18 + 49145316 TGCTTCTTGATTCAGCCT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1649988 18 - 2680843 TGCTTCTTGATTCAGCCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 397467 18 - 4471408 TGCTTCTTGATTCAGCCT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 605280 18 + 2501019 TGCTTCTTAATTCAGCCT i proCoq1.NW_012149263v1 C 0 C 0 s dasNov3.JH563638 385226 18 + 643850 TGCCTCTTCATTTAGCCT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3990064 225 - 30143674 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649368 0 - 122678785 C e saiBol1.JH378197 5440245 1683 + 8899380 M e manLeu1.NW_012102454v1 939932 0 - 2385121 C a score=200372.000000 s hg38.chr19_GL383574v1_alt 117529 21 + 155864 GCACATGGCTGCCAAGATAAC s panTro5.chr19 36185154 21 + 61309027 GCACATGGCTGCCAAGATAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929410 21 + 64411610 GCACATGGCTGCCAAGATAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341092 21 - 8369475 GCACATGGCTGCCAAGATAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938391 21 - 106955855 GCACACGGCTGACAAGATAAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253225 21 + 53671032 GCACATGGCTGCCAAGGTAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707134 21 + 59248254 GCACATGGCTGCCAAGGTAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579246 21 - 13342542 GCACATGGCTGCCAAGGTAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503709 21 + 7714307 GCACATGGCTGCCAAGGTAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307731 21 + 50890351 GCACATGGCTGCCAAGGTAAC i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2382008 21 + 4274983 GCACATGGCTGCCAAGGTAAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594529 21 + 49145316 ACACATGGCTGCCAAGATAAT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1650006 21 - 2680843 AGACGTGGCTGCCAAAATAAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 397485 21 - 4471408 GCACATGGCTGCCAAGATAAT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 605298 21 + 2501019 GCACACTGCTGCAGAGATAAC i proCoq1.NW_012149263v1 C 0 I 334 s canFam3.chr1 4649368 21 - 122678785 GTGCACTGTTGCAGGGTTAGC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 385244 21 + 643850 GCACACTGCTGCAAGGCTAAC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3990064 225 - 30143674 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e saiBol1.JH378197 5440245 1683 + 8899380 M e manLeu1.NW_012102454v1 939932 0 - 2385121 C a score=41640.000000 s hg38.chr19_GL383574v1_alt 117550 7 + 155864 TCCCAGT--- s panTro5.chr19 36185175 7 + 61309027 TCCCAGT--- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929431 7 + 64411610 TCCCAGT--- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341113 7 - 8369475 TCCCAGT--- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938412 7 - 106955855 TCCCAGT--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253246 7 + 53671032 TCCCACT--- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707155 7 + 59248254 TCCCACT--- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579267 7 - 13342542 TCCCACT--- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503730 7 + 7714307 TCCCGCT--- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307752 7 + 50890351 TCCCGCT--- i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2382029 7 + 4274983 TCCCACT--- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594550 7 + 49145316 TCCCAGT--- i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1650027 7 - 2680843 TCCCAGT--- i cebCap1.NW_016107633v1 C 0 I 338 s aotNan1.NW_018505377v1 397506 7 - 4471408 TCCCAGT--- i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4649389 7 - 122678785 ACTTAAT--- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 385265 7 + 643850 ---CATTGAT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 605319 334 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e saiBol1.JH378197 5440245 1683 + 8899380 M e manLeu1.NW_012102454v1 939932 0 - 2385121 C a score=21417.000000 s hg38.chr19_GL383574v1_alt 117557 4 + 155864 GTCT s panTro5.chr19 36185182 4 + 61309027 GTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929438 4 + 64411610 GTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341120 4 - 8369475 GTCT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30253253 4 + 53671032 GTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707162 4 + 59248254 GTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579274 4 - 13342542 GTCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503737 4 + 7714307 GTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307759 4 + 50890351 GTCT i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2382036 4 + 4274983 GTCT i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4649396 4 - 122678785 ATCA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 385272 4 + 643850 GTCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 605319 334 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e aotNan1.NW_018505377v1 397513 0 - 4471408 C e cebCap1.NW_016107633v1 1650034 338 - 2680843 I e saiBol1.JH378197 5440245 1683 + 8899380 M e calJac3.chr22 28594557 0 + 49145316 C e manLeu1.NW_012102454v1 939932 0 - 2385121 C e nomLeu3.chr10 63938419 0 - 106955855 C a score=49919.000000 s hg38.chr19_GL383574v1_alt 117561 8 + 155864 TATATATG s panTro5.chr19 36185186 8 + 61309027 TATATATG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929442 8 + 64411610 TATATATG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341124 8 - 8369475 TATATATG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938419 4 - 106955855 ----TATG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253257 8 + 53671032 TATATAGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707166 8 + 59248254 TATATAGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579278 8 - 13342542 TATATAGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503741 8 + 7714307 TATATAGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307763 8 + 50890351 TATATAGG i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2382040 8 + 4274983 TATATAGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594557 7 + 49145316 -ATATGTG i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1650372 8 - 2680843 TATATATG i cebCap1.NW_016107633v1 I 338 C 0 s aotNan1.NW_018505377v1 397513 7 - 4471408 -ATATATG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4649400 6 - 122678785 --TTTGTG i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 385276 8 + 643850 TTCATATG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 605319 334 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e saiBol1.JH378197 5440245 1683 + 8899380 M e manLeu1.NW_012102454v1 939932 0 - 2385121 C a score=59928.000000 s hg38.chr19_GL383574v1_alt 117569 5 + 155864 TTTAA s panTro5.chr19 36185194 5 + 61309027 TTTAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929450 5 + 64411610 TTTAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341132 5 - 8369475 TTTAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938423 5 - 106955855 TTTAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253265 5 + 53671032 TTTAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707174 5 + 59248254 TTTAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579286 5 - 13342542 TTTAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503749 5 + 7714307 TTTAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307771 5 + 50890351 TTTAA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2382048 5 + 4274983 TTTAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594564 5 + 49145316 TTTAA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1650380 5 - 2680843 TTTAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 397520 5 - 4471408 TTTAA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 605653 5 + 2501019 TTTAA i proCoq1.NW_012149263v1 I 334 C 0 s canFam3.chr1 4649408 5 - 122678785 TTTAA i canFam3.chr1 I 2 C 0 s dasNov3.JH563638 385284 5 + 643850 TTCAA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3990064 225 - 30143674 I e otoGar3.GL873654 5518412 285 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e saiBol1.JH378197 5440245 1683 + 8899380 M e manLeu1.NW_012102454v1 939932 0 - 2385121 C a score=732207.000000 s hg38.chr19_GL383574v1_alt 117574 65 + 155864 AAGCTTTTTGTGATCCTGTTTCCTGATGAAGTCCAAGCACACTAAGATCCTCTGACTTCATGAAA s panTro5.chr19 36185199 65 + 61309027 AAGCTTTTTGTGATCCTGTTTCCTGATGAAGTCCAAGCACTCTAAGATCCTCTGACTTCATGAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929455 65 + 64411610 AAGCTTTTTGTGATCCTGTTTCCTGATGAAGTCCAAGCACTCTAAGATCCTCTGACTTCATGAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341137 65 - 8369475 AAGCTTTTTGTGATCCTGTTTCCTGATGAAGTCCAAGCACACTAAGATCCTCTGACTTCATGAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938428 65 - 106955855 AAGCTTTTTGTGATCCTGTTTCCTGATGAATTCCAAGCACACTAAGATCCTCTGACTTCATGAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253270 65 + 53671032 AAGCTTTTCGTGATCCTGTTTCCTGATGAAGTCCAAGCACACTAAGATTCTCTGACTTCAAGAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707179 65 + 59248254 AAGCTTTTCGTGATCCTGTTTCCTGATGAAGTCCAAGCACACTAAGATTCTCTGACTTCAAGAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579291 65 - 13342542 AAGCTTTTCGTGATCCTGTTTCCTGATGAAGTCCAAGCACGCTAAGATTCTCTGACTTCAAGAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503754 65 + 7714307 AAGCTTTTTGTGATCCTGTTTCCTAATGAAGTCCAAGCACACTAAGATTCTCTGACTTTAAGAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307776 65 + 50890351 AAGCTTTTCGTGATCCTGTTTCCTGATGAAGTCCAAGCACACTAAGATTCTCTGACTTCAAGAAA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2382053 65 + 4274983 AAGCTTTTCGTGATCCTGTTTCCTGATGAAGTCCAGGCACACTAAGATTCTCTGACTTCAAGAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594569 65 + 49145316 AAGCTGTTTGTGATCCTGTTTCCTGATGAAGTCCAAGCACACTAAGATCCTCTGACTTCATGAAA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1650385 65 - 2680843 AAGCTTTTTGTGATCCTGTTTCCTGATGAAGTCCAAGCACACTAAGATCCTCTGACTTCATGAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 397525 65 - 4471408 AAGCTTTTTGTGATCCTGTTTCCTGATGAAGTCCGAGCACACTAAGATCCTCTGACTTAATGAAA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 605658 65 + 2501019 AAGGTTTTTGTCATTCTGGTTCCTGATGAAGTCCAAGCCCACCAAAATCCTCTGACTTCGTGAAA i proCoq1.NW_012149263v1 C 0 I 8 s otoGar3.GL873654 5518697 65 + 5549422 AAGCTTTTTATGATTCTATTTCCTGATGAAGTGCAAGCCCACCAAGATCCTTTGACTTTGTGAAA i otoGar3.GL873654 I 285 I 1 s canFam3.chr1 4649413 62 - 122678785 AAGCCTCTGTGACTCCTGTTTCCTGGC-AAGTCCAAGCCCGACAAGATCC--TGACTTTATGGAA i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 385289 63 + 643850 AGGCCTTTTATGA--CTGTTGTGTCCTGAAGTCCAAACTCTCTAAGATCCTTTGATTCCATGAAA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3990064 225 - 30143674 I e mm10.chr7 111132813 2347 - 145441459 I e saiBol1.JH378197 5440245 1683 + 8899380 M e manLeu1.NW_012102454v1 939932 0 - 2385121 C a score=46760.000000 s hg38.chr19_GL383574v1_alt 117639 8 + 155864 -AACCACGA s panTro5.chr19 36185264 8 + 61309027 -AACCACGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929520 8 + 64411610 -AACCACGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341202 8 - 8369475 -AACCACGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938493 8 - 106955855 -AACCACGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253335 8 + 53671032 -AACCACGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707244 8 + 59248254 -AACCACGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579356 8 - 13342542 -AACCACGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503819 8 + 7714307 -AACCATGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307841 8 + 50890351 -AACCATGA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2382118 8 + 4274983 -AACCACGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594634 8 + 49145316 -AATCATGA i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1650450 8 - 2680843 -AACCATGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 397590 8 - 4471408 -AACCATGA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5518763 7 + 5549422 -CATCTTG- i otoGar3.GL873654 I 1 C 0 s canFam3.chr1 4649476 7 - 122678785 -CATCTTG- i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 385352 8 + 643850 CTATCTTG- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 605723 8 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e mm10.chr7 111132813 2347 - 145441459 I e saiBol1.JH378197 5440245 1683 + 8899380 M e manLeu1.NW_012102454v1 939932 0 - 2385121 C a score=643009.000000 s hg38.chr19_GL383574v1_alt 117647 62 + 155864 AGTTAAAATGT-----AAAAATATTTATATCTTAGAATTT-AATAAAAACAGGACAGgtgcagatgtg s panTro5.chr19 36185272 58 + 61309027 AGTTAAAATGT-----AAAAATAT----ATCTTAGAATTT-AATAAAAACAGGACAGgtgcagatgtg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929528 58 + 64411610 AGTTAAAATGT-----AAAAATAT----GTCTTAGAATTT-AATAAAAACAGGACAGgtgcagatgtg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341210 62 - 8369475 AGTTAAAATGT-----AAAAATATTTATATCTTAGAATTT-TATAAAAACAGGACAGGTGCAGTTGTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938501 62 - 106955855 AGTTAAAATGT-----AAAAGTATTTATATCTTAGAATTT-AATAAAAACAGGACAGgtgcagatgtg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253343 62 + 53671032 AGTTAAAATGT-----AAAAATATGTACATCTTAGAATTT-AATAAAAACAGCACAGGTGCAGATGTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707252 62 + 59248254 AGTTAAAATGT-----AAAAATATGTACATCTTAGAATTT-AATAAAAACAGCACAGGTGCAGATGTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579364 62 - 13342542 AGTTAAAATGT-----AAAAATATGTACATCTTAGAATTT-AATAAAAACAGCACAGgtgcagatgta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503827 62 + 7714307 AGTTAAAATGT-----AAAAATATGTACATCTTAGAATTT-AATCAAAACAGCACAGgtgcagatgta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307849 62 + 50890351 AGTTAAAATGT-----AAAAATATGTACGTCTTAGGATTT-AATCAAAACAGCACAGgtgcagatgta i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2382126 62 + 4274983 AGTTAAAATGT-----AAAAATATGTACATCTTAGAATTT-AATAAAAACAGCACAGGTGCAGATGTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594642 62 + 49145316 AGTTAAAATGT-----AAAAATATTTACATCTAAGAATTT-AAAGAAAAGAGCACAGGTATAGATGTG i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1650458 62 - 2680843 AGTTAAAATGT-----AAAAATGTTTACATCTTAGAATTT-TAAAAAAAGAGCACAGgtacagatgtg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 397598 63 - 4471408 AGTTAAAATGT-----AAAAATATTCACATCTTTGAATTTAAAAAAAAAGAGCACAGgtacagatgtg i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 605731 62 + 2501019 GGTTAAAATGT-----AAAAATGTGTACATCTTAGAATTT-AATAAAAACACCATAGATGCAGATGTG i proCoq1.NW_012149263v1 I 8 I 1015 s otoGar3.GL873654 5518770 62 + 5549422 GTTTAAAATGC-----AAACATTTATATATCTTAGAATTT-AATAAAAACAGCATAGATGCAAATGTA i otoGar3.GL873654 C 0 I 2 s canFam3.chr1 4649483 61 - 122678785 GGTTAAAAAGT-----GAAACTGTGTGTGTCTTAGAATTG-AATAAAAACAGTATAGGTGCAGATAT- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 385360 67 + 643850 GGTTAAAATGTTTAAAAAAAAAAAGTGCATCTTAGAATTG-AATAAAAACAATATAGGTGCAGATATG i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3990064 225 - 30143674 I e mm10.chr7 111132813 2347 - 145441459 I e saiBol1.JH378197 5440245 1683 + 8899380 M e manLeu1.NW_012102454v1 939932 0 - 2385121 C a score=148589.000000 s hg38.chr19_GL383574v1_alt 117709 18 + 155864 gatcaagctcagaga------aat s panTro5.chr19 36185330 18 + 61309027 gatcaagctcagaga------aat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929586 18 + 64411610 gatcaagctcagaga------aat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341272 18 - 8369475 GATCAAGCTCAGAGA------AAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938563 18 - 106955855 gatcaagctcagaga------aat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253405 21 + 53671032 GATCAAGATCAGAGAAAT---AAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707314 21 + 59248254 GATCAAGATCAGAGAAAT---AAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579426 21 - 13342542 gatcaagctcagagaaat---aat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503889 21 + 7714307 gatcaagctcagagaaat---aat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307911 21 + 50890351 gatcaagctcagagaaat---aat i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2382188 21 + 4274983 GTTCAAGCTCAGAGAAAT---AAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594704 21 + 49145316 GATCAAGCTCAGAGAAAT---AAT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1650520 21 - 2680843 gatcaagctcagagagat---aat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 397661 21 - 4471408 gatcaagctcagagaaat---aat i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5518834 24 + 5549422 TTTCAAACCCAGAGAAATATCATT i otoGar3.GL873654 I 2 C 0 s canFam3.chr1 4649544 19 - 122678785 -----ACGTCAGAGAAATGTCAGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 385427 18 + 643850 GATCAAACTCCAAGAAAT------ i dasNov3.JH563638 C 0 I 760 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e mm10.chr7 111132813 2347 - 145441459 I e saiBol1.JH378197 5440245 1683 + 8899380 M e manLeu1.NW_012102454v1 939932 0 - 2385121 C a score=55875.000000 s hg38.chr19_GL383574v1_alt 117727 5 + 155864 cagtg s panTro5.chr19 36185348 5 + 61309027 cagtg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929604 5 + 64411610 cagtg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341290 5 - 8369475 Cagtg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938581 5 - 106955855 cagtg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253426 5 + 53671032 Cagtg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707335 5 + 59248254 Cagtg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579447 5 - 13342542 cagtg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503910 5 + 7714307 cagtg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29307932 5 + 50890351 cagtg i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2382209 5 + 4274983 Cagta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594725 5 + 49145316 Cagtg i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1650541 5 - 2680843 cagtg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 397682 5 - 4471408 cagtg i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5518858 5 + 5549422 CAGTG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4649563 5 - 122678785 Cagtg i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385445 760 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e saiBol1.JH378197 5440245 1683 + 8899380 M e manLeu1.NW_012102454v1 939932 0 - 2385121 C a score=397151.000000 s hg38.chr19_GL383574v1_alt 117732 43 + 155864 aaagaagcaaggtacagaacaatg--tatgttt--gcccatttgtgt s panTro5.chr19 36185353 43 + 61309027 gaagaagcaaggtacagaacaatg--tatgttt--gcccatttgtgt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929609 43 + 64411610 gaagaagcaaggtacagaacaatg--tatgttt--gcccatttgtgt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341295 43 - 8369475 gaagaagcaaggtacagaacaatg--tatgttt--gcccatttgtgt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938586 43 - 106955855 gaaaaagcaaggtgcagaacagtg--tatattt--gcccatttgtgt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253431 43 + 53671032 aaaaaagcaaggtgcagaacaatg--tatattt--gcccatttgtgC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707340 43 + 59248254 aaaaaagcaaggtgcagaacaatg--tatattt--gcccatttgtgC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579452 43 - 13342542 aaaaaagcaaggtgcagaacaatg--tatattt--gcccatttgtgC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5503915 43 + 7714307 aaaaaagcaaggtgcagaacaatg--tatattt--gcccatttgtgC i cerAty1.NW_012005268v1 C 0 I 333 s chlSab2.chr6 29307937 43 + 50890351 aaaaaagcaaggtgcagaacaatg--tatattt--gcccatttgtgC i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2382214 43 + 4274983 aaaaaagcaaggtgcagaacaatg--tatattt--gcccatttgtgC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28594730 45 + 49145316 aaaaaagcaaggtgcaaaacagtgtatatattt--gcccatttgtgt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5441962 43 + 8899380 aaaaaaGCAAGATGTAAAGCAGTG--TATTTTT--GCCCATTTGTGT i saiBol1.JH378197 M 1683 C 0 s cebCap1.NW_016107633v1 1650546 42 - 2680843 aaaaaagcaaggtgcaaaacagtg--tatattt--gcccatttgtg- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 397687 43 - 4471408 aaaaaagcaacgtgccaaacagta--tatattt--gcccatttgtgt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5518863 34 + 5549422 -AAAAAGTAAGGTGTTGGACAGTG--TGTAT--------ATGTGT-- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4649568 45 - 122678785 aaacaggcaagatgcagaagagtg--tgtatatgggcccatttgtgt i canFam3.chr1 C 0 I 11 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385445 760 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e manLeu1.NW_012102454v1 939932 0 - 2385121 C a score=516117.000000 s hg38.chr19_GL383574v1_alt 117775 55 + 155864 TTTTCTAATTTTAAA-AAATTTCTCCACTTTTGAAGTAATATGAGCTCATTTGTTT s panTro5.chr19 36185396 55 + 61309027 TTTTCTAATTTTAAA-AAATTTCTCCACTTTTGAAGTAATATGAGCTCATTTGTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929652 55 + 64411610 TTTTCTAATTTTAAA-AAATTTCTCCACTTTTGAAGTAATATGAGCTCATTTGTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341338 55 - 8369475 TTTTCTAATTTAAAA-AAGTTTCTCCACTTTTGAAGTAATATGAGCTCATTTGTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938629 55 - 106955855 TTTTCTAATTTTAAA-AAATTTATCCACTTTTGAAGTAATATGAGCTCGTTTGTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253474 56 + 53671032 TTTTCTAATTTTAAACAAATTTCTCCACTTTTGAAGTAATATGTGCTTATTTGTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707383 56 + 59248254 TTTTCTAATTTTAAACAAATTTCTCCACTTTTGAAGTAATATGTGCTTATTTGTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579495 56 - 13342542 TTTTCTAATTTTAAACAAATTTCTCCACTTTTGAAGTAATATGTGCTTATTTGTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5504291 56 + 7714307 TTTTCTAATTTTAAACAAATTTCTCCACTTTTGAAGTAATATGTGCTTATTTGTTT i cerAty1.NW_012005268v1 I 333 C 0 s chlSab2.chr6 29307980 56 + 50890351 TTTTCTAATTTTAAACAAATTTCTCCACTTTTGAAGTAATATGTGCTTATTTGTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939932 56 - 2385121 TTTTCTAATTTTAAACAAATTTCTCCACTTTTGAAGTAATATGTGCTTATTTGTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2382257 56 + 4274983 TTTTCTAATTTTAAACAAATTTCTCCACTTTTGAAGTAATATGTGCTTAtttgttt i colAng1.NW_012111697v1 C 0 M 969 s calJac3.chr22 28594775 55 + 49145316 TTTTCTAATTTTAAA-AAGTTTCTCCATTTTTGAAGTAATATGTGCTCATTTGTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442005 55 + 8899380 TTTTCTAATTTTAAA-AAATTTCTCAATTTTTGAAGTAATATGTGCTCATTTGTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1650588 54 - 2680843 -tTTCTAATTTTAAA-AAATTTCTCCATTTTTGAAGTAATATGTGCTCATTGGTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 397730 55 - 4471408 TTTTCTAATTTTAAA-AAATTTCTCCATTTTTGAAGTAACATGTGCTCATTTGTTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5518897 8 + 5549422 ----------TTAAA-AAT------------------------------------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385445 760 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649613 11 - 122678785 I a score=945986.000000 s hg38.chr19_GL383574v1_alt 117830 109 + 155864 AAAAAAATATATATAggccaggcatggtg-----------------------------------gctc-acgcctgtaatcccagcactttgagaggctgaggcgggcggatcacctgaggtc-cagagtttgagaccag-cctgac s panTro5.chr19 36185451 109 + 61309027 AAAAAAATATATATAggccaggcatggtg-----------------------------------gctc-acgcctgtaatcccagcactttgagaggctgaggcgggcggatcacctgaggtc-cagagtttgagaccag-cctgcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929707 109 + 64411610 AAAAAAATATATATAggccaggcatggtg-----------------------------------gctc-acgcctgtaatcccagcactttgagaggctgaggcgggcggatcacctgaggtc-cagagtttgagaccag-cctgcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341393 109 - 8369475 AAAAAAATATATATAggccaggcatggtg-----------------------------------gctc-acgcctgtaatcccagcactttgagaggctgaggcgggcggatcacctgaggtc-cagagtttgagaccag-cctgac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938684 109 - 106955855 AAAAATACATATATAggccaggcatggcg-----------------------------------gctc-atgcccgtaatcccagcactttgagaggctgaggcgggcggatcaccggaggtc-gagatgttgatagcag-cctgac i nomLeu3.chr10 C 0 M 100 s rheMac8.chr19 30253530 109 + 53671032 AAAAATATATATATAggccaggcatggtg-----------------------------------gctc-acgcctgtaatcccagcactttgggaggctgaggtgggcagatcacctgaggtc-cggagttcaagaccag-gctgac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707439 109 + 59248254 AAAAATATATATATAggccaggcatggtg-----------------------------------gctc-acgcctgtaatcccagcactttgggaggctgaggtgggcagatcacctgaggtc-cggagttcaagaccag-gctgac i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579551 109 - 13342542 TAAAATATATATATAggccaggcgtggtg-----------------------------------gctc-acgcctgtaatcccagcactttgggaggctgaggtgggcagatcacttgaggtc-cggagttcaagaccag-gctgac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5504347 109 + 7714307 TAAAATATATATATAggccaggcatggtg-----------------------------------gctc-acgcctgtaatcccagcactttgggaggctgaggtgggcagatcacctgaggtc-tggagttcgagaccag-cctgat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29308036 109 + 50890351 TAAAATACATATGTAggccaggcatggtg-----------------------------------gctt-acgcctgtaatcccagcactttgggaggctgaggtgggcagatcacctgaggtc-cggagttcaagacgag-cctgac i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 939988 109 - 2385121 TAAAATATATATATAggccaggcatggtg-----------------------------------gctc-acgcctgtaatcccagcactttgggaggctgaggtgggcagatcacctgaggtc-cggagttcgagaccag-cctgac i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28594830 144 + 49145316 AGAAAAATATATATAGGCCAGGTATGATGgcctcagcctcccaagtagctgggattacaggcATgctc-atgcctgtaatcgcagcactttgggaggccaaggtgggcagatcatctgagttt-gggagttcaagaccag-cctgat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442060 109 + 8899380 AGAAAAATATATATAggccaggtatgatg-----------------------------------gctc-atgcctataatcccagaactttgggaggctaaggtgggcagatcacctgagttc-gggagtttaagaccag-cctgat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1650642 109 - 2680843 AGaaaaaaatatataggccaggtatgatg-----------------------------------gctc-atgcctataatcccagcactttgggaggccaaggtgggcagatcatctgagttc-gggagttcaagaccag-cctgat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 397785 109 - 4471408 AGAAaaatatatataggccaggtatgatg-----------------------------------gctc-atgcctgtaatcccagcaatttgggaggccaaggtgggcagatcacctgagttc-gggagttcaagaccag-cctgat i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5518905 107 + 5549422 -GAAATATTTA---Aggctgggtacggta-----------------------------------gcttaatgcctgtaatcctagcactctgagaggccaagaagggtggattgcctgagctcacaggttttgagaccagccctga- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385445 760 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649613 11 - 122678785 I e colAng1.NW_012111697v1 2382313 969 + 4274983 M a score=1186731.000000 s hg38.chr19_GL383574v1_alt 117939 156 + 155864 aacatggtgaaaccccacctctactaaaaatacaaaaattaactgggcatggtggcgggtgcc--tgtaatcccagctgtccaggaggctgcagcaggagaattgcttgaacctggga----ggtggaggttgcagtgagccaagatcgtgccactgcactc s panTro5.chr19 36185560 156 + 61309027 aacatggtgaaaccccacctctactaaaaatacaaaaattaactgggcatggtggcgggtgcc--tgtaatcccagctgtccaggaggctgcagcaggagaattgcttgaacctggga----ggtggaggttgcagtgagccaagattgtgccactgcactc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929816 156 + 64411610 aacatggtgaaaccccacctctactaaaaatacaaaaattaactgggcatggtggcgggtgcc--tgtaatcccagctgtccaggaggctgcagcaggagaattgcttgaacctggga----ggtggaggttgcagtgagccaagattgtgccactgcactc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341502 156 - 8369475 aacatggtgaaaccccacctctactaaaaatacaaaaattaactgggcatggtggcgggtgcc--tgtaatcccagctgtccaggaggctgcggcaggagaattgcttgaacttggga----ggtggaggttgcagtgagccaagatcgtgccactgcactc i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30253639 156 + 53671032 gacgtggtgaaaccccatctctactagaaatacaaaaattaaccaggcatggtggtgggtgcc--tgtaatcccagctgcccgggaggctgcggcaggagaattgcttgaacctggga----ggcggaggttgcaatgagtggagatcgtgccactgcattc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707548 156 + 59248254 gacatggtgaaaccccatctctactagaaatacaaaaattaaccaggcatggtggtgggtgcc--tgtaatcccagctgcccgggaggctgcggcaggagaattgcttgaacctggga----ggcggaggttgcaatgagtggagatcgtgccactgcattc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579660 156 - 13342542 gacatggtgaaaccccatctctactagaaatacaaaaattaaccaggcatggtggtgggtgcc--tgtaatcccagctgcccgggaggctgcggcaggagaattgcttgaacctggga----ggcggaggttgcaatgagtggagatcgtgccactgcactc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5504456 155 + 7714307 gacatggtgaaaccccatctctactaaaaatacaaaaattaaccgggcatggtggtgggtgcc--tgtaatcccagctgcccgggaggctgcggcagga-aattgcttgaacctggga----ggcggaagttgcagtgagcagagatcgtgccactgcactc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29308145 156 + 50890351 gacatggtgaaaccccatctctactaaaaatacaaaaattaaccgggcatggtggtgggtgcc--tgtaatcccagctgtccgggaggctgcggcaggagaattgcttgaacctggga----ggcggaggttgcaatgcgccgagatcgtgtcactgcactc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 940097 156 - 2385121 gacatggtgaaaccccatctctactaaaaatacaaaaattaaacgggcatggtggtgggtgcc--tgtaatcccagctgcccgggaggctgcgacaggagaattacttgaacctggga----ggcggaagttgcagtgagcagagatcgtgccactgcactc i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28594974 159 + 49145316 gacatggtaaaacaacatctctactaaaaatacaaaaattaactgggcgtggtgatgtgtgcc--agtagttccagctacttgggaggctgcaacaggagaattgctcgaacctgggg-tggggcagaggttgcagtgagctgagatcccgttactgcactc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442169 158 + 8899380 gacatggtgaaacctcatctctactaaaaatacaaaaattaactgggcgtggtgatgtgtgcc--agtagttccagctacttgggaggctgtgacaggagaattgcttgaacttggcg--ggggcagaggttgcagtgagctgagatcgcattactgcacgc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1650751 159 - 2680843 gacatggtgaaatcccatctctactaaaaatacaaaaattaactgggcgtggtgatgtgtgcc--agtagttccagctacttggggggctgcgacaggagaattgcttgaacctggcg-ggaggcggaggttgcagtgagctgagattgcgttactgcactc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 397894 160 - 4471408 gatatggtgaaaccccatctctactaaaaatacaaaaattaactgggtgtggtgatgtgtgcc--agtagttccagctacttgggaggctgcgacaggagaattgcttgaacctggtaggggggtggaggttgcagtgagctgagatcgcgttactgcactc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5519012 144 + 5549422 gcaagagtgagacccagtctctg--aaaaatac---------ccggacattgtggtgggtgcctatatagtcccagctacctggaaagctgaggcaagagaatcacttgagcccaaga----gtttgaggttgctgtgagctatga---caccagggcactc i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385445 760 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649613 11 - 122678785 I e colAng1.NW_012111697v1 2382313 969 + 4274983 M e nomLeu3.chr10 63938793 100 - 106955855 M a score=417189.000000 s hg38.chr19_GL383574v1_alt 118095 105 + 155864 cagcctgggtgac-agagcaagatt-ccatctcaaaaaataaataaataa--aaataaaataaaTAATGTCTCCCTCTCTCgatagagagatagatagatagatagata s panTro5.chr19 36185716 101 + 61309027 cagcctgggtgac-agagcaagatt-ccatctcaaaaaatacataaataa--aaataaaataaaTAATGTCTCCCTCTCTCgataga----tagatagatagatagata i panTro5.chr19 C 0 C 0 s panPan2.chr19 39929972 85 + 64411610 cagcctgggtgac-agagcaagatt-ccatctcaaaaaatacataaataa--aaataaaataaaTAATGTCTCCCTCTCTCgataga--------------------ta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341658 89 - 8369475 cagcctgggtgac-agagcaagatt-ccatctcaaaaaataaataaataa--aaataaaataaaTAATGTCTCCCTCTCTTgataga----------------gagata i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938894 66 - 106955855 cagcctgggtgac-agagcaagatt-ccatctcaaaaaat------------------aata---aaTGTCTCCCTCTCTCgatagg--------------------ta i nomLeu3.chr10 M 100 C 0 s rheMac8.chr19 30253795 73 + 53671032 cagcctgggtgac-aaagcgagact-ccatctcaaaaa---------taa-taaataaaataaataaTGTCTCCCTGTCTC----GA--------------------TA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707704 73 + 59248254 cagcctgggtgac-aaagcgagact-ccatctcaaaaa---------taa-taaataaaataaataaTGTCTCCCTGTCTC----GA--------------------TA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579816 73 - 13342542 cagcctgggtgac-aaagcgagact-ccatctcaaaaa---------taa-taaataaaataaaTAATGTCTCCCTGTCTC----GA--------------------TA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5504611 77 + 7714307 cagcctgggtgac-agagcgagact-ccatctcaaaaa---------taa-taaataaaataaaTAATGTCTCCCTCTCTCAataga--------------------ta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29308301 73 + 50890351 cagcctgcgtgac-agagcgagact-ccatctcaaaaa---------taa-taaatgaaataaataaTGTCTCCCTCTCTC----GA--------------------TA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 940253 73 - 2385121 tagcctgggtgac-agagcgagact-ccatctcaaaaa---------taa-taaata----aaaTAATGTCTCCCTCTCTCAataga--------------------ta i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28595133 67 + 49145316 cagcctgagtgacaagagtgagact-ccatct--aaaaataaat-------------aaataaaTAATGTCTCCTTCTCT------A--------------------TA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442327 76 + 8899380 cagcctgagtgac-agagtgagact-ccatct--aaaaataaataaataagtaaatgaaataaataaTGTCTCCTTCTCT----------------------------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1650910 80 - 2680843 cagcctgagtgac-aaggtgagactcccatct--aaaaataaataaataagtaaatgaaataaataaTGTCTCCTTCTCT------A--------------------TA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 398054 75 - 4471408 cagcctgagtgac-agagtgagact-ccatct--aaaaataaat----aagtaaatgaaataaataaTGTCTCCTTTTCT------a--------------------ta i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5519156 56 + 5549422 taccaaaggcaac-aaagtgagact-ccgtctcaaaaa----------aa--aaaaaaaagaaaTA-------------------TA--------------------TA i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385445 760 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649613 11 - 122678785 I e colAng1.NW_012111697v1 2382313 969 + 4274983 M a score=93368.000000 s hg38.chr19_GL383574v1_alt 118200 14 + 155864 gatagataga----taga s panTro5.chr19 36185817 14 + 61309027 gatagataga----taga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39930057 14 + 64411610 gatagataga----taga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341747 14 - 8369475 gatagataga----taga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938960 14 - 106955855 gatagataga----taga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253868 14 + 53671032 GATAGAGAGA----GAGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707777 14 + 59248254 GATAGAGAGA----GAGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579889 14 - 13342542 GATAGAGAGA----GAGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5504688 14 + 7714307 gatagataga----gagc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29308374 14 + 50890351 GATAGATAGA----GAGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 940326 14 - 2385121 gatagataga----gagc i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28595200 14 + 49145316 GATAGATAGG----TAGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442403 13 + 8899380 -ATAGATAGG----TAGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1650990 14 - 2680843 GATAGATAGG----TAGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 398129 18 - 4471408 gatagataggtagataga i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5519212 2 + 5549422 GA---------------- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4649624 14 - 122678785 gagagagaga----gagg i canFam3.chr1 I 11 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990064 225 - 30143674 I e dasNov3.JH563638 385445 760 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e colAng1.NW_012111697v1 2382313 969 + 4274983 M a score=93778.000000 s hg38.chr19_GL383574v1_alt 118214 8 + 155864 taTACATG s panTro5.chr19 36185831 8 + 61309027 taTACATG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39930071 8 + 64411610 taTACATG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341761 8 - 8369475 taTACATG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938974 8 - 106955855 tagaCATG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253882 8 + 53671032 TACACATG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707791 8 + 59248254 TACACATG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579903 8 - 13342542 TACACATG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5504702 8 + 7714307 taCACATG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29308388 8 + 50890351 TACACATG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 940340 8 - 2385121 taCACATG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28595214 8 + 49145316 TACACATG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442416 8 + 8899380 TACACATG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1651004 8 - 2680843 TACACATG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 398147 8 - 4471408 taCACATG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3990289 8 - 30143674 TATAAATG i micMur3.chr22 I 225 C 0 s otoGar3.GL873654 5519214 8 + 5549422 TATGCATG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4649638 8 - 122678785 tccacatg i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e dasNov3.JH563638 385445 760 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e colAng1.NW_012111697v1 2382313 969 + 4274983 M a score=1769557.000000 s hg38.chr19_GL383574v1_alt 118222 157 + 155864 AAATAGGTTTATAAGTGCAGAAATA-ATTTATGGAATGATA--GAAAAGA------------AACAGTGGTTGTTTTTGGGATGAGACCCCAGAAAACCAGGCTGTTAGGCTGAGTTAGCTTTTTCTT-TGCATAC-CATTTTGTATGGTGTGAA--TTTTTTTCCCTGTGTATAT s panTro5.chr19 36185839 157 + 61309027 AAATAGGTTTATAAGTGCAGAAATA-ATTTCTGGAATGATA--GAAAAGA------------AACAGTGGTTGTTTTTGGGATGAGACCCCAGAAAACCAGGCTGTTAGGCTGAGTTAGCTTTTTCTT-TGCATAC-CATTTTGTATGGTGTGAA--TTTTTTTCCCTGTGTATAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39930079 156 + 64411610 AAATAGGTTTATAAGTGCAGAAATA-ATTTCTGGAATGATA--GAAAAGA------------AACAGTGGTTGTTTTTGGGATGAGACCCCAGAAAACCAGGCTGTTAGGCTGAGTTAGCTTTTTCTT-TGCATAC-CATTTGGTATGGTGTGAA---TTTTTTCCCTGTGTATAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341769 158 - 8369475 AAATAGGTTTATAAGTGCAGAAATA-ATTTCTGGAATGATA--GAAAAGA------------AACAGTGGTTGTTTTTGGGATGAGACCCCAGAAAACCAGGCTGTTAGGCTGAGTTAGCTTTTTCTT-TGCATAC-CATTTTGTATGGTGTGAA-TTTTTTTTCCCTGTGTATAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63938982 157 - 106955855 AAATAGGTTTATAAGTACAGAAATA-ATTTCTGGAATGATA--GAAAAGA------------AACAGTGGTTGTTTTTGGGATGAGACCCCAGGAAACCAGGCTGTTAGGCTGAGTTAGCTTTTTCTT-TGCATAC-CATTTTGTATGGTGTGAT--TTTTTTCCCCTGTGTATAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30253890 157 + 53671032 AAATAGGTTTATAAGTGCAGAAATA-ATTTCTGGAATGACA--GAAAAGA------------AACAGTGGTGGTTTTTGGGATGAGACCCCAGAAAACTAGGCTGTTAGGCTGAGTTAGCTTTTTCTT-TGCATAC-CATTTTGTATGGTGTGAA--TTTTTTTCCCTGTGTATAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707799 157 + 59248254 AAATAGGTTTATAAGTGCAGAAATA-ATTTCTGGAATGACA--GAAAAGA------------AACAGTGGTGGTTTTTGGGATGAGACCCCAGAAAACCAGGCTGTTAGGCTGAGTTAGCTTTTTCTT-TGCATAC-CATTTTGTATGGTGTGAA--TTTTTTTCCCTGTGTATAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4579911 157 - 13342542 AAATAGGTTTATAAGTGCAGAAATA-ATTTCTGGAATGACA--GAAAAGA------------AACAGTGGTGGTTTTTGGGATGAGACCCCAGAAAACCAGGCTGTTAGGCTGAGTTAGCTTTTTCTT-TGCATAC-CATTTTGTATGGTGTGAA--TTTTTTTCCCTGTGTATAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5504710 157 + 7714307 AAATAGGTTTATAAGTGCAGAAATA-ATTTCTGGAATGACA--GAAAAGA------------AACAGTGGTTGTTTTTGGGATGAGACCCCAGAAAACCAGGCTGTTAGGCTGAGTTAGCTTTTTCTT-TGCATAC-CATTTTGTATGGTGTGAA--TTTTTTTCCCTGTGTATAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29308396 157 + 50890351 AAATAGGTTTATAAGTGCAGAAATA-ACTTCTGGAATGACA--GAAAAGA------------AACAGTGGTTGTTTTTGGGATGAGACCCCAGAAAACCAGGCTGTTAGGCTGAGTTAGCTTTTTCTT-TGCATAC-CATTTTGTATGGTGTGAA--TTTTTTTCCCTGTGTATAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 940348 157 - 2385121 AAATAGGTTTATAAGTGCAGAAATA-ATTTCTGGAATGACA--GAAAAGA------------AACAGTGGTTGTTTTTGGCATGAGACCCCAGAAAACCAGGCTGTTAGGCTGAGTTAGCTTTTTCTT-TGCATAC-CATTTTGTATGGTGTGAA--TTTTTTTCCCTGTGTATAT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28595222 145 + 49145316 AAATA-ATTTGTAAGTGTAGAAATA-ATTGCTGGAATGATA--GAAAAGA------------AACAGTGGTTGTTTTGGGGATAGGACCCCAGAAAACCAGGCTGCTAGGCTGATTTAGCTTTTTC-T-CGCATAT-CATTTTGTATAGTGTGAAttttttttt------------ i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442424 143 + 8899380 AAATA-ATTTGTAAGTGCAGAAATA-ATTTCTGGACTAATA--GAAAAGA------------AACAGTGGTGGTTTTGGGGATGAGACCCCAGAAAACCAGGCTGCTAGGCTGATTTAGCTTTTTC-T-CTAATAT-CATTTTGTATGGTGTGAA--ttttttt------------ i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1651012 143 - 2680843 AAATA-ATTTGTAAGTGCAGAAATA-ATTTCTGGAATGATA--GAAAAGA------------AACAGTGGTGGTTTTGGGGATGGGACCCCAGAAAACCAGGCTGCTAGGCTGACTTAGCTTTTTC-T-CACATAT-CATTTTGTATGGTGTGAA--ttttttt------------ i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 398155 143 - 4471408 AAATA-ATTTGTAAGTGCAGAAATA-ATTTCTGGAATGATA--GAAAAGA------------AACAGTGGTTGATTTGGGGATGGGACCCCAGAAAACCAGGCTGCTAGGCTGATTTAGCTTTTTC-T-TATATAT-CATTTTGTATGATGTGAA--ttttttt------------ i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3990297 156 - 30143674 AAATAGGTTTATAAGTGCAGAAGAA-ATTTCTGGAAGGATA--GAAAAGG------------AACAATGGTTGCCTTTGGAATGAGGCTGCAGAAAACCAGGCTGTTAGACTGACTTAGCTTTTTC-T-TGCATAC-CATTTTGTATGGTGTGAA--TTTTCTTCACTGTGTATAT i micMur3.chr22 C 0 I 558 s otoGar3.GL873654 5519222 154 + 5549422 AAATAGGTTTATAAGTGTAGAAGTA-ATTTTTGGAGGGATATTGAAAAGG------------AGTGATGCTTGCCTTTGGGTTAAGGCTGCAGAAAGCCAGGCTGTTTGACTGACTTAGCTTTTTC-T-TGTGTAT-CATTTTTTATGGTTTGAA--T----TTCACTGAGTTTAT i otoGar3.GL873654 C 0 I 3 s canFam3.chr1 4649646 155 - 122678785 aaataggtttctaagtgtagaaaaacatttctggaatgata--gaaaaga------------aagagtgtttgccttcaggatgaggCCCCAGAAATCAAGGCTTTTAGACTGACCTAGCTTTTTCTTGCACATAC-TCTTTTGTACAGTATGAT--TTTTCTTGTCACTGT---- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 386205 162 + 643850 AAGTAAGTTTaaaaaaaaaaaaaaa-aggcaaagaacaaaa--caaaaaaaTGCCCATGTTTAGCAGTGGTTGCTTTTGGAATGAAGCCCCAGAAATCCAGGCTGCTAGTCT----TAGTTTTCTC-T-TGCATACTCTTTTTGTATGGTGTGAT--TATTTTTACC---GTATAT i dasNov3.JH563638 I 760 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e mm10.chr7 111132813 2347 - 145441459 I e colAng1.NW_012111697v1 2382313 969 + 4274983 M a score=68638.000000 s hg38.chr19_GL383574v1_alt 118379 13 + 155864 --GTAttttcttttt s panTro5.chr19 36185996 13 + 61309027 --GTATTTTCttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39930235 13 + 64411610 --GTAttttcttttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341927 13 - 8369475 --GTATTTTCTtttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63939139 13 - 106955855 --GTAttttcttttc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30254047 13 + 53671032 --GTATTTTCTTTCt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707956 13 + 59248254 --GTATTTTCTTTCt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4580068 13 - 13342542 --GTATTTTCTTTCt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5504867 13 + 7714307 --GTAttttctttct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29308553 13 + 50890351 --GTAttttctttct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 940505 12 - 2385121 --GTAttttctttc- i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5519379 13 + 5549422 --ttattttttttat i otoGar3.GL873654 I 3 C 0 s canFam3.chr1 4649801 13 - 122678785 --GTATTATATTTTC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 386367 13 + 643850 Gaatattatattt-- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e mm10.chr7 111132813 2347 - 145441459 I e aotNan1.NW_018505377v1 398298 0 - 4471408 C e cebCap1.NW_016107633v1 1651155 0 - 2680843 C e saiBol1.JH378197 5442567 0 + 8899380 C e calJac3.chr22 28595367 0 + 49145316 C e colAng1.NW_012111697v1 2382313 969 + 4274983 M a score=6006.000000 s hg38.chr19_GL383574v1_alt 118392 1 + 155864 t s panTro5.chr19 36186009 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39930248 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341940 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63939152 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30254060 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707969 1 + 59248254 t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4580081 1 - 13342542 t i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5504880 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29308566 1 + 50890351 t i chlSab2.chr6 C 0 C 0 s otoGar3.GL873654 5519392 1 + 5549422 t i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 386380 1 + 643850 t i dasNov3.JH563638 C 0 I 548 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649814 0 - 122678785 C e aotNan1.NW_018505377v1 398298 0 - 4471408 C e cebCap1.NW_016107633v1 1651155 0 - 2680843 C e saiBol1.JH378197 5442567 0 + 8899380 C e calJac3.chr22 28595367 0 + 49145316 C e colAng1.NW_012111697v1 2382313 969 + 4274983 M e manLeu1.NW_012102454v1 940517 0 - 2385121 C a score=490598.000000 s hg38.chr19_GL383574v1_alt 118393 68 + 155864 ttct-----------------ttttttttttttgagacagagtcttgctctgttgcctaggctggagtgaagtggtgcaatcttg s panTro5.chr19 36186010 74 + 61309027 ttttct-----------tttcttttttttttttgagacagagtcttgctctgttgcctaggctggagtgaagtggtgcaatcttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39930249 68 + 64411610 tctt-----------------ttttttttttttgagacagagtcttgctctgttgcctaggctggagtgaagtggtgcaatcttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6341941 77 - 8369475 tttcgtttc--------ttttttttttttttttgagacagagtcttgctctgttgcctaggctggagtgaagtggtgcaatcttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63939153 64 - 106955855 ---------------------tttcttttttttgagacagagtcttgctctgttgcctaggctggagtgcagtggtgcaatcttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30254061 79 + 53671032 tctttctttttc------ttttttttttttcttgagacagagtcttgttctgttgtctaggctggagtgcagtggtacaatcttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34707970 79 + 59248254 tctttctttttc------ttttttttttttcttgagacagagtcttgttctgttgtctaggctggagtgcagtggtacaatcttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4580082 80 - 13342542 tctttctttttc-----ttttttttttttttttgagacagagtcttgttctgttgtctaggctggagtgcagtggtacaatcttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5504881 71 + 7714307 tctttctttttt--------------tttttttgagacagagtcttgttttgttgtctaggctggagtgcagtggtacaatcttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29308567 85 + 50890351 tctttcttttcttttcttttcttttttttttttgagacagagtcttgttctgttgtctaggctggagtgcagtggtacaatcttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 940517 68 - 2385121 -----------------tttcttttttttttttgagacagagtcttgttttgttgtctaggctggagtgcagtggtacaatcttg i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28595367 68 + 49145316 -----------------ttttttttttttttttgagacagagtcttgctctgttgcccagggcagagtgcagtgacacaatcttg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442567 68 + 8899380 -----------------gtttgtttgtttgtttgagacagagtcttgctctgttgcccaggccggagtgcagtgacacaatcttg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1651155 63 - 2680843 -----------------tttttttttttttt-----atagagtcttgctctgttgcccaggccagagtgcagtgacataatcttg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 398298 59 - 4471408 -----------------ttttttt---------gagacagagtcttgcactgttgcccaggctggagtgcagcgacacaatcttg i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5519393 68 + 5549422 ttt--------------ttattttttattttttgagacggagcttcaagctatccccctgggtagagtgccatggcctcaca--- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e dasNov3.JH563638 386381 548 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649814 0 - 122678785 C e colAng1.NW_012111697v1 2382313 969 + 4274983 M a score=729040.000000 s hg38.chr19_GL383574v1_alt 118461 65 + 155864 gctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctcctgagtagctgg s panTro5.chr19 36186084 65 + 61309027 gctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctcctgagtagctgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39930317 65 + 64411610 gctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctcctgagtagctgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6342018 65 - 8369475 gctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctcctgagtagctgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63939217 65 - 106955855 gctcactgcaacctctgcctcctgagttcaagcgattctcctgcctcagcctcctgagtagctgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30254140 65 + 53671032 gctcactgcaacctccgcctcctgggttgaagcgattgtcctgtctcagcctcctgagtagctgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34708049 65 + 59248254 gctcactgcaacctccgcctcctgggttgaagcgattgtcctgtctcagcctcctgagtagctgg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4580162 65 - 13342542 gctcactgcaacctccgcctcctgggttgaagcgattgtcctgtctcagcctcctgagtagctgg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5504952 65 + 7714307 gctcactgcaacctccgcctcccaggttgaagcgattgtcctgtctcagcctcctgagtagctgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29308652 65 + 50890351 gctcactgcaacctccgcctcccgggttaaagcgattctcctgcctcagcctcctgagtagctgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 940585 65 - 2385121 gctcactgcaacctccgcctcccgggttgaagcgattgtcctgtctcagcctcctgagtagctgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2383317 65 + 4274983 gctcactgcaagctccgcctcccgggttcaagcgattctcccgtctcagcctcctgagtagctgg i colAng1.NW_012111697v1 M 969 C 0 s calJac3.chr22 28595435 65 + 49145316 gctcactgcaaccttagcctcctgagttcaagtgattctcctgcctcagccacttgagtagctag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442635 65 + 8899380 gctcactgcaaccttcgcctcctgagttcaagtgattctcctgcctcagccacttgagtagctag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1651218 65 - 2680843 gctcactgcaaccttcgcctcctgagttcaagtaattctcctgcctcagccacctgagtagctag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 398357 65 - 4471408 gctcactgcaaccttcgcctcctgagttcaagtgattctcctgcctcagccacctgagtagctag i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5519461 65 + 5549422 gctcacagcaacctccaactcctgggctcaagcgagtctcctgcctcagcctcccaagtagcagg i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e dasNov3.JH563638 386381 548 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649814 0 - 122678785 C a score=596101.000000 s hg38.chr19_GL383574v1_alt 118526 61 + 155864 gattacaggtgcccgccactacgtctggctaatttttgtatttttaatagagacagggttt s panTro5.chr19 36186149 61 + 61309027 gattacaggtgcccgccactacgtctggctaatttttgtatttttaatagagacagggttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39930382 61 + 64411610 gattacaggtgcccgccactacgtctggctaatttttgtatttttaatagagacagggttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6342083 61 - 8369475 gattacaggcgcccgccactacgtctggctaatttttgtatttttaatagagacagggttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63939282 59 - 106955855 gattacaggcgcccaccactacgcctggctaatttttatatttttagtagagaca--gttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30254205 61 + 53671032 gattacaggcgcccgccaccatgcctggctaatttttgtatttttagtagagacggggttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34708114 61 + 59248254 gattacaggcgcccgccaccatgcctggctaatttttgtatttttagtagagacggggttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4580227 61 - 13342542 ggttacaggcgcccgccaccatgcctggctaatttttgtatttttagtagagacggggttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5505017 61 + 7714307 gattacaggcgcccgccaccatgcctggctaatttttgtatttttagtagagacggggttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29308717 61 + 50890351 gattacaggcgcccgccaccatgcctggctaatttttgtatttttagtagagacggggttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 940650 61 - 2385121 gattacaggtgcccgccaccatgcctggctaatttttgtattttcagtagagacggggttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2383382 61 + 4274983 gattataggcgcccgccacaatgcctggctaatttttgtatttttagtagagacggggttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28595500 61 + 49145316 gattacaggcacctgccaccatgcctggctaatttttgcatttttcacagaggcagggttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442700 61 + 8899380 gattacaggcacctgccaccatgcctggctaatttttgcatttttcacagaggcagggttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1651283 61 - 2680843 gattacaggcacctgccaccacgcctggctaatttttgtgtttttcacagaggcagggttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 398422 61 - 4471408 gattacaggcacctgccaccatgcctggctaatttttgtgtttttcacagaggcagggttt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5519526 45 + 5549422 gactacaggcgcccgccacagcgcc-ggccattttttg-----gttgcag----------c i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4649814 27 - 122678785 AACTAAAAG----------------------------------TTAATAAAAACAAAATTT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e dasNov3.JH563638 386381 548 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I a score=395508.000000 s hg38.chr19_GL383574v1_alt 118587 52 + 155864 caccatgttggccatgttggccaggtt---ggtctcgaactcctgacctcaagtg s panTro5.chr19 36186210 52 + 61309027 caccatgttggccatgttggccaggtt---ggtctcgaaatcctgacctcaagtg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39930443 52 + 64411610 caccatgttggccaggttggccaggtt---ggtctcgaaatcctgacctcaagtg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6342144 52 - 8369475 caccatgttggccatgttggccaggtt---ggtctcgaactcctgacctcaagtg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63939341 43 - 106955855 caccat---------gttggccaggtt---ggtctcgaactcctgacctcaagtg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30254266 43 + 53671032 caccat---------gttggccaggct---ggtctcgacctcctgagctcaagtg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34708175 43 + 59248254 caccat---------gttggccaggct---ggtctcgacctcctgagctcaagtg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4580288 43 - 13342542 caccat---------gttggccaggct---ggtctcgacctcctgagctcaagtg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5505078 43 + 7714307 caccat---------gttagccaggct---ggtctcgacctcctgagctcaagtg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29308778 43 + 50890351 caccat---------gttggccaggct---ggtctccacctcctgagctcaagtg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 940711 43 - 2385121 caccat---------gttggccaggct---ggtctcgacctcctgagctcaagtg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2383443 43 + 4274983 caccat---------gttggccaggct---gctctcaaactcctgagctcaagtg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28595561 43 + 49145316 caccat---------gttggtcaggtt---ggtctctaactcctaacctcaagtg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442761 43 + 8899380 caccat---------gttggtcaggtt---ggtttctaactcctgacctcaagtg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1651344 43 - 2680843 caccat---------gttcgtcaggtt---ggtttctaactcctgacctcaagtt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 398483 43 - 4471408 caccat---------gttggtcaggtt---ggtctctaactcctgacctcaaggg i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5519571 55 + 5549422 catcattgttgtttggtgggcctgggctggggattcgaacccgccaccttaggtg i otoGar3.GL873654 C 0 I 189 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e dasNov3.JH563638 386381 548 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649841 0 - 122678785 C a score=578602.000000 s hg38.chr19_GL383574v1_alt 118639 59 + 155864 atccatccacctcggcctcccaaagtgctgggattacaggcgcgagtcaccgcacccgg s panTro5.chr19 36186262 59 + 61309027 atccatccacctcagcctcccaaagtgctgggattacaggcgcaagtcaccgcacccgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39930495 59 + 64411610 atccatccacctcggcctcccaaaatgctgggattacaggcgcaagtcaccgcacccgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6342196 59 - 8369475 atccatccacctcggcctcccaaagtgctgggattacaggcgcgagtcaccgcacccgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63939384 59 - 106955855 atccctccaccttggcctcccaaagtgctgggattacaggcgcaagtcaccgcacccgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30254309 59 + 53671032 atccacccgccttagcctcccaaagtgctgggattacaggcgtgagtcactgcacccgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34708218 59 + 59248254 atccacccgccttagcctcccaaagtgctgggattacaggcgtgagtcactgcacccgg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4580331 59 - 13342542 atccacccgccttagcctcccaaagtgctgggattacaggcgtgagtcactgcacccgg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5505121 59 + 7714307 atccacccgccttagcctcccaaagtgctgggattacaagcgtgagtcaccgcacccgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29308821 59 + 50890351 atccacccgccttagcctcccaaagtgctgggattacaggcgtgagtcaccacacgcgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 940754 59 - 2385121 atccacccgccttagcctcccaaagtgctgggattacaagcgtgagtcaccgcaccagg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2383486 59 + 4274983 atccacccgccttagcctcccaaagtggtggaattacaggcgtgagtcactgcacccgg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28595604 59 + 49145316 atccacccaccttggcctcccaaagtgctgggattataggcgtgagtcactgtgcccag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442804 59 + 8899380 atccacccacctaggcctcccaaagtgctgggattataggcatgagtcactgtgcccag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1651387 59 - 2680843 atccacccaccttggcctcccaaagtgctgggattataggcgtgagtcactgtgcccag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 398526 59 - 4471408 atccacccaccttggcctcccaaagtgctgggattatagacgtgagtcactgtgtccag i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e dasNov3.JH563638 386381 548 + 643850 I e otoGar3.GL873654 5519626 189 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649841 0 - 122678785 C a score=253708.000000 s hg38.chr19_GL383574v1_alt 118698 33 + 155864 tcTATGTTTTCATTTTAAC----AATAACTTTTAAAA s panTro5.chr19 36186321 33 + 61309027 tcTGTGTTTTCATTTTAAC----GATAACTTTTAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39930554 33 + 64411610 tcTGTGTTTTCATTTTAAC----AATAACTTTTAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6342255 33 - 8369475 tcTATGTTTTCATTTTAAC----AATAACTTTTAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63939443 33 - 106955855 ccTATGTTTTCATTGTAAC----AATAACTTTTAAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30254368 33 + 53671032 ccTATGTTTTCATTTTAAC----AATAACTTTTATAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34708277 33 + 59248254 ccTATGTTTTCATTTTAAC----AATAACTTTTATAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4580390 33 - 13342542 ccTATGTTTTCATTTTAAC----AATAACTTTTATAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5505180 33 + 7714307 ccTATGTTTTCATTTTAAC----AATAACTTTTATAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29308880 33 + 50890351 ccTATGTTTTCATTTTAAC----AATAACTTTTATAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 940813 33 - 2385121 ccTATGTTTTCATTTTAAC----AATAACTTTTATAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2383545 33 + 4274983 ccTATGTTTTCATTTTAAC----AATAACTTTTAAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28595663 21 + 49145316 ccTATGTTTTCATTTTAAT----GA------------ i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442863 21 + 8899380 ccTATGTTTTCATTTTAAC----AG------------ i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1651446 21 - 2680843 ccTATCTTTTCATTTTAAC----AA------------ i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 398585 21 - 4471408 ccTATGTTTTCATTTTAAC----AA------------ i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5519815 37 + 5549422 TTTATATTTTCAATTTAACAGttaattaattttaaaa i otoGar3.GL873654 I 189 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e dasNov3.JH563638 386381 548 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4649841 0 - 122678785 C a score=570951.000000 s hg38.chr19_GL383574v1_alt 118731 54 + 155864 TAAATGTCTATG--ATGGACA-TGGCTGTTGTGTAGAG--TGa--atgtagcatggaggtt s panTro5.chr19 36186354 54 + 61309027 TAAATGTCTATG--ATGGACA-TGGCTGTTGTGTAGAG--TGa--atgtagcatggaggtt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39930587 54 + 64411610 TAAATGTCTATG--ATGGACA-TGGCTGTTGTGTAGAG--TGa--atgtagcatggaggtt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6342288 54 - 8369475 TAAATGTCTATG--ATGGACA-TGGCTGTTGTGTAGAG--TGa--atgtagcatggaggtt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63939476 54 - 106955855 TAAATGTCTATG--ATGTACA-TGGCTGTTGTGTAGAG--TGa--atgtagcatagaggtt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30254401 54 + 53671032 TAAATGTCTATG--ATGTACA-TGGCTGTTGTGTAGAG--TGA--ACGCTgcatagaggtt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34708310 54 + 59248254 TAAATGTCTATG--ATGTACA-TGGCTGTTGTGTAGAG--TGA--ACGCTgcatagaggtt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4580423 54 - 13342542 TAAATGTCTATG--ATGTACA-TGGCTGTTGTGTAGAG--TGA--ACGCTGCATAGAGGTT i macNem1.NW_012011689v1 C 0 I 303 s cerAty1.NW_012005268v1 5505213 56 + 7714307 TAAATGTCTATGATATGTACA-TGGCTGTTGTGTAGAG--TGA--ACGCagcatagaggtt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29308913 54 + 50890351 TAAATTTCTATG--ATGTACA-TGGCTGTTGTGTAGAG--TGA--ACGCAGCATAGAGGTT i chlSab2.chr6 C 0 I 1435 s manLeu1.NW_012102454v1 940846 56 - 2385121 TAAATGTCTATGATATGTACA-TGGCTGTTGTGTAGAG--TGA--ACGCagcatagaggtt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2383578 54 + 4274983 TAAATGTCTATG--ATGTACA-TGGCTGTTGTGTAGAG--TGA--ACGCagcatagaggtt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28595684 54 + 49145316 TAAATGTCTATG--ATGTACA-TGACAGTTATGTAGAG--TGa--atgtagcatagaggtt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442884 56 + 8899380 TAAATGTCTATG--ATGTACA-TGGCAGTTATGTAGAG--TGAACAtgtagcatagaggtt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1651467 54 - 2680843 TAAATGTCTATG--ATGTACA-TGGCAGTTATGTAGAG--TGA--ACGtagcatagaggtt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 398606 54 - 4471408 TAAATGTCTATG--ATGTACG-TGGCAGTTATGTAGAG--TGA--ACGtagcatagaggtt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5519852 48 + 5549422 taaatGTCT-----CTGCACATTAACAGTCATGTGGAGAACGA--ACGT------GAGGTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4649841 54 - 122678785 TAAATGTTTGCC--ATGTACG-TAGCAGTCATTTAGAGAGGGA--ATGCGG--TAGATgtt i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e dasNov3.JH563638 386381 548 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I a score=182367.000000 s hg38.chr19_GL383574v1_alt 118785 16 + 155864 aagagtgaggactgtg- s panTro5.chr19 36186408 16 + 61309027 aagagtgaggactgtg- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39930641 16 + 64411610 aagagtgaggactgtg- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6342342 16 - 8369475 aagagtgaggactgtg- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63939530 16 - 106955855 aagagtgaggactgtg- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30254455 16 + 53671032 aagagtgaggactgtg- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34708364 16 + 59248254 aagagtgaggactgtg- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4580780 16 - 13342542 aaGAGTGAGGACTGTG- i macNem1.NW_012011689v1 I 303 C 0 s cerAty1.NW_012005268v1 5505269 16 + 7714307 aagagtgaggactgtg- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29310402 16 + 50890351 AAGAGTGAGGActgtg- i chlSab2.chr6 I 1435 C 0 s manLeu1.NW_012102454v1 940902 16 - 2385121 aagagtgaggactgtg- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2383632 16 + 4274983 aagagtgaggactgtg- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28595738 16 + 49145316 aagagtgaggactgtg- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442940 16 + 8899380 aagagtgaggactgtg- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1651521 16 - 2680843 aagagtgaggactgtg- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 398660 16 - 4471408 aagagtgaggactgtg- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5519900 15 + 5549422 AAGAGCAATAGCTAT-- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4649895 14 - 122678785 aaga---aggattctat i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e dasNov3.JH563638 386381 548 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I a score=5440331.000000 s hg38.chr19_GL383574v1_alt 118801 486 + 155864 caaggcggcttgggttcaaggcctgcccctgc------------------------------------------cttgacctcagtttacctcctctgaaaat-ggggagg----tagtaatacctgcctcctggggttgtag--------------tgaggcattactgagttaatatttgtaaagtccttggaacagttcccagGAGGTATGTGT--TTGTCG----TCGTCTCTGTTGCTCTGTCCCTGTGCTATGCATGACCGTAAGTGTAAAGATGTGTCCAGCCTCTGTCTCTG-ATGCTCCCAGTTCATTTGGAAAGGGAGAGCATGC--AGCTAATGA----CAGAGACAGCAGAGGCTGCAGGAG-TCAG-AAAGGCTCCTTGGGAACTGAGGTGGCCCAAGATGGTTTCATCAAAATGATGGTTGTTAAATATGGGTAATTTCTA-----------GAGGGAA---------------AATAACACAAAGGGACTTTTTCC-ATG---TTG-TGTGTCCCAGCCAGCCTGAGGCAGGCAGAGGAGTCAGAAACAGGACAAGAGCTTTGAGGAGGCCTGAAATT s panTro5.chr19 36186424 486 + 61309027 caagacggcttgggttcaaggcctgcccctgc------------------------------------------cttgacctcagtttacctcctctgaaaat-ggggagg----tagtaatacctgcctcctggggttgtag--------------tgaggcattactgagttaatatttgtaaagtccttggaacagttcccagGAGGTATGTGT--TTGTCG----TCGTCTCTGTTGCTCTGTCCGTGTGCTATGCATGACCGTAAGTGTAAAGATGTGTCCAGCCTCTGTCTCTG-ATGCTCCCAGTTCATTTGGAAAGGGAGAGCATGC--AGCTAATGA----CAGAGACAGCAGAGGCTGCAGGAG-TCAG-AAAGGCTCCTTGGGAACTGAGGTGGCCCAAGATGGTTTCATCAAAATGATGGATGTTAAATATGGGTAATTTCTA-----------GAGGGAA---------------AATAACACAAAGGGACTTTTTCC-ATG---TTG-TGTGTCCCAGCCAGCCTGAGGCAGGCAGAGGAGTCAGAAACAGGACAAGAGCTTTGAGGAGGCCTGAAATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39930657 486 + 64411610 caagacggcttgggttcaaggcctgcccctgc------------------------------------------cttgacctcagtttacctcctctgaaaat-ggggagg----tagtaatacctgcctcctggggttgtag--------------tgaggcattactgagttaatatttgtaaagtccttggaacagttcccagGAGGTATGTGT--TTGTCG----TCGTCTCTGTTGCTCTGTCCGTGTGCTATGCATGACCGTAAGTGTAAAGATGTGTCCAGCCTCTGTCTCTG-ATGCTCCCAGTTCATTTGGAAAGGGAGAGCATGC--AGCTAATGA----CAGAGACAGCAGAGGCTGCAGGAG-TCAG-AAAGGCTCCTTGGGAACTGAGGTGGCCCAAGATGGTTTCATCAAAATGATGGATGTTAAATATGGGTAATTTCTA-----------GAGGGAA---------------AATAACACAAAGGGACTTTTTCC-ATG---TTG-TGTGTCCCAGCCAGCCTGAGGCAGGCAGAGGAGTCAGAAACAGGACAAGAGCTTTGAGGAGGCCTGAAATT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6342358 485 - 8369475 caagacggcttgggttcaaggcctgcccctgc------------------------------------------cttgacctcagtttacctcctctgaaaat-ggggagg----tagtaatacctgcctcctggggttgtag--------------tgaggcattactgagttaatatttgtaaagt-tttggaacagttcccagGAGGTATGTGT--TTGTTG----TCGTCTCTGTTGCTCTGTCCCTGTGCTATGCATGACCGTAAGTGTAAAGATGTGTCCAGCCTCTGTCTCTG-ATGCTCCCAGTTCATTTGGAAAGGGAGAGCATGC--AGCTAATGA----CAGAGACAGCAGAGGCTGCAGGAG-TCAG-AAAGGCTCCTTGGGAACTGAGGTGGCCCAAGATGGTTTCATCAAAATGATGGATGTTAAATATGGGTAATTTCTA-----------GAGGGAA---------------AATAACACAAAGGGACTTTTTCC-ATG---TTG-TGTGTCCCAGCCAGCCTGAGGCAGGCAGAGGAGTCAGAAACAGGACAAGAGCTTTGAGGAGGCCTGAAATT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63939546 487 - 106955855 caagacggcttgggttcaaggcctgcccctgc------------------------------------------cttgacctcagtttacctcctctgaaaat-gaggagg----tagtaatacctgcctcctggggttgtag--------------tgaggcattactgagttaatatttgtaaagtccttggaacagttcccagGAGGTATGTGT--TTGTCA----TTGTCTCTGTTGCTCTGTCCCTGTGCTGTGCATGACCGTAAGTGTAAAGATGTGTTCAGCCTCTGTCTCTG-ATGCTCCCAGTTCATTTGGAAAGGGAGAGCATGC--AGCGAATGA----CAGAGACAGCAGAGGCTGCAGGAG-TCAG-AATGGCTCCTTGGGAACTGAGGTGGCCCAAGATGGTTTCATCAAAATGGTGGATGTTAAATATGTGTAATTTCTA-----------GAGGGAA---------------AATAACACAAAGGGACTTTTTCCAAGG---TTG-TGTGTCCCAGCCAGCCTGAGGCAGGCAGAGGAGTCAGAAACAGGACAAGAGCTTTGAGGAGGCctgaaatt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30254471 485 + 53671032 taagacggcttgggttcgaggcctgcccctgc------------------------------------------cttgacctcagtttacctcctctgaaaat-ggagagg----tagtaatacctgcctcctggagttgtag--------------cgaggcattactgagttaatatttgtaaagtccttggaacagttcccaggaggtatgtgt--atgtcg----ttgtctgtgttGCTCTGTCCCTGTGCTGTACATGACAGTAAGTGTAAAGATGTGTCCAGCCTCTGTCTCTG-ATGCTCCCAGTTCATTTGGAAAGGGAGAG--C-C--AGCTAATGA----CAGAGACGGCAGAGGTTGCAGGAG-TCAGAAAAGGCTCCTTGGGAGCTAAGGTGGCCGAAGATGGTTTCATCAAAACGGCGGATGTTAAATATGGGTAATTTCTA-----------GAGGGAA---------------AATAACACAAAGGGACTTTTTCCAAGG---TTG-TGTGTCCCAGCCAGCCTGAGGCAGGCAGAGGAGTCAGAAACAGGACAAGAGCTTTGAGGAGGCctgaaatt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34708380 487 + 59248254 taagacggcttgggttcgaggcctgcccctgc------------------------------------------cttgacctcagtttacctcctctgaaaat-ggagagg----tagtaatacctgcctcctggagttgtag--------------cgaggcattactgagttaatatttgtaaagtccttggaacagttcccaggaggtatgtgt--atgtcg----ttgtctgtgttGCTCTGTCCCTGTGCTGTGCATGACAGTAAGTGTAAAGATGTGTCCAGCCTCTGTCTCTG-ATGCTCCCAGTTCATTTGGAAAGGGAGAGCAC-C--AGCTAATGA----CAGAGACGGCAGAGGTTGCAGGAG-TCAGAAAAGGCTCCTTGGGAGCTAAGGTGGCCGAAGATGGTTTCATCAAAACGGCGGATGTTAAATATGGGTAATTTCTA-----------GAGGGAA---------------AATAACACAAAGGGACTTTTTCCAAGG---TTG-TGTGTCCCAGCCAGCCTGAGGCAGGCAGAGGAGTCAGAAACAGGACAAGAGCTTTGAGGAGGCctgaaatt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4580796 487 - 13342542 TAAGACGGCTTGGGTTCGAGGCCTGCCCCTGC------------------------------------------CTTGAcctcagtttacctcctctgaaaat-ggagagg----tagtaatacctgcctcctggagttgtag--------------cgaggcattactgagttaatatttgtaaagtccttggaacagttcccagGAGgtatgtgt--ttgtcg----ttgtctgtgttgctctgtccctgtgctgtgCATGACAGTAAGTGTAAAGATGTGTCCAGCCTCTGTCTCTG-ATGCTCCCAGTTCATTTGGAAAGGGAGAGCAC-C--AGCTAATGA----CAGAGACAGCAGAGGTTGCAGGAG-TCAGAAAAGGCTCCTTGGGAGCTAAGGTGGCCGAAGATGGTTTCATCAAAACGGCGGATGTTAAATATGGGTAATTTCTA-----------GAGGGAA---------------AATAACACAAAGGGAGTTTTTCCAAGG---TTG-TGTGTCCCAGCCAGCCTGAGGCAGGCAGAGGAGTCAGAAACAGGACAAGAGCTTTGAGGAGGCctgaaatt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5505285 487 + 7714307 taagacggcttgggttcgaggcctgcccctgc------------------------------------------cttgacctcagtttacctcctctgaaaac-ggagagg----tagtaatacctgcctcctggagttgtag--------------cgaggcattgctgagttaatatttgtaaagtccttggaacagttcccagGAGGTATGTGT--TTGTCG----TTGTCTATGTTGCTCTGTCCCTGTGCTGTGCGTGACAGTAAGTGTAAAGATGTGTCCAGCCTCTGTCTCTG-ATGCTCCCTGTTCATTTGGAAAGGGAGAGCAC-C--AGCTAATGA----CAGAGACAGCAGAGGTTGCAGGAG-TCAGAAAAGGCTCCTTGGGAGCTGAGGTGGCCGAAGATGGTTTCATCAAAACGGCAGATGTTAAATATGGGTCTTTTCTA-----------GAGGGAA---------------ATTAACACAAAGGGACTTTTTCCAAGG---TTG-TGTGTCCCAGCCAGCCTGAGGCAGGCAGAGGAGTCAGAAACAGGACAAGAGCTTTGAGGAGGCctgaaatt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29310418 486 + 50890351 taagacgttttgggttcgaggcatgcccctgc------------------------------------------cttgacctcagtttacctcctctgaaaat-ggagagg----tagtaatacctgcctgctggagttgtag--------------cgaggcattactgagttaatatttgtaaagtccttggaacagttcccagGAGgtatgtgt--ttgtca----ttgtctgtgttgctctgtccctgtgctgtgCATGACAGTAAGTGTAAAGATGTGTCCAGCCTCTGTCTCTG-ATGCTCCCAGTTCATTTGGAAAGGGAGAGCAC-C--AGCTAATGA----CAGAGACAGCAGAGGTTGCAGGAG-TCAGAAAAGGCTCCTTGGGAGCTGAGGTGGCCGAAGATGGTTTCATCAAAACGGCGGATGTTAAATATGGGTAATTTCTA-----------GAGGGAA---------------AATAACACAAAGGGACTTTTTCCAAGG---TTG-TGTGTCCCAGCCAGCCTCAGGCAGGCAGAGGAGTCAGAAACAGGACAAGAG-TTTGAGGAGGCctgaaatt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 940918 487 - 2385121 taagacggcttgggttcaaggcctgcccctgc------------------------------------------cttgacctcagtttacctcctctgaaaat-ggagagg----tagtaatacctgcctcctggagttgtag--------------cgaggcattactgagttaatatttgtaaagtccttggaacagttcccagGAGgtatgtgt--ttgtcg----ttgtctgtgttgctctgtccctgtgctgtgCGTGACAGTAAGTGTAAAGATGTGTCCAGCCTCTGTCTCTG-ATGCTCCCTGTTCATTTGGAAAGGGAGAGCAC-C--AGCTAATGA----CAGAGACAGCAGAGGTTGCAGGAG-TCAGAAAAGGCTCCTTGGGAGCTGAGGTGGCCGAAGATGGTTTCATCAAAACGGCAGATGTTAAATATGGGTAATTTCTA-----------GAGGGAA---------------AATAACACAAAGGGACTTTTTCCAAGG---TTG-TGTGTCCCAGCCAGCCTGAGGCAGGCAGAGGAGTCAGAAACAGGACAAGAGCTTTGAGGAGGCctgaaatt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2383648 484 + 4274983 taagacggcttgggttcaaggcctgcccctgc------------------------------------------cttgacctcagtttacctcctctgaaaat-ggagagg----tagtaatacctgcctcctggggttgtag--------------cgaggcattactgagtgaatatttgtaaagtccttggaacagttcccagGAGGTATGTGT--TTGTC-------GTCTGTGCTGCTCTGTCCCTGTGCTGTGCATGACAGTAAGTGTAAAGATGTGTCCAGCTTCTGTCTCTG-ATGCTCCCAGTTCATTTGGAAAGGGAGAGCAC-C--AGCTAATGA----CAGAGACAGCAGAGGTTGCAGGAG-TCAGAAAAGCCTCCTTGGGAGCAGAGGTGGCCAAAGATGGTTTCATCAAAACGGCGGATGTTAAATATGGGTAATTTCTA-----------GAGGGAA---------------AATAACACAAAGGGACTTTTTCCAAGG---TTG-TGTGTCCCAGCCAGCCTGAGGCAGGCAGAGGAGTCAGAAACAGGACAAGAGCTTTGAGGAGGCctgaaatt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28595754 476 + 49145316 caagatggcttgggttcaaggcctgcctctgc------------------------------------------cttgacctcagtttaccgcctctgaaaat-ggggcgg----tagtgttacctgcctcctggggctgt-----------------gaggcattactgaataaatatttgtaaagtcctttgaacagtTCTCAGAAGGTATGTGT--TTGTCGTC-GTCGTCTCTGTTGCTCTGTCCCTGTGCTGTGCATGACAGTAAGTATGAAGATATGTCCAGCCTTTTTCTCTG-ATGCTCCCAGTTCATTTGGAAAGGGAGAGCACAC--AGCTAATGA----CAGAGACGGCAGAGGCTGCAGGAG-TCAGAAAAGGCTCCTTGGGAACTGAGGTAGCCCAAGATGGTTTCATCAAAAGGGTGGATATTAAATATG-GTAATTTCTA-----------GACAG---------------------ACACAAAGGAACTTTTTCCAAGG---GTG-TGTGTCCCAGCCAGCATGAGGCAGGCGGAGGAAACAGAA-----ACAAGAGCTTTGAGGAGGCctgaaatt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5442956 480 + 8899380 caagatggcttgggttcaaggcctgcctctgc------------------------------------------cttgatctcagtttacctcctctgaaaat-ggggagg----tagttatacctgcctcctggggttgt-----------------gaggcattactgaattaatatttgtaaagtcctttgaacagttcttagGAGGTATGTGT--TTGTTGTC-ATCGTCTCTGTTGCTCTGTCCCTGTGCTGTGCATGACAGTAAGTATGAAGATACGTCCATCCTTTGTCTCTG-ATGCTCCCAGTTCATTTGGAAAGGGAGAGCACAC--AGCTGATGA----CAGAGACAGCAGAGGCTGCAGGAG-TCAGAAAAGGCTCCTTGGGAACTGAGGTAGCCCAAGATGGTTTCATCAAAAGGGTGGATATTAAATATG-GTAATTTCTA-----------GACGG---------------------ACACAAAGGAACTTTTTCCAA-G---GTG-TGTGTCCCAGCCAGCATGAAGTAGGCGGAAGAAGCAGAAACAAGACAAGAGCTTTGAGGAGGCctgaaatt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1651537 481 - 2680843 caagatggcttgggttcaaggcctgcctctgc------------------------------------------cttgatctcagtttacctcctctgaaaat-gaggagg----tagtgatacctgcctcctggggttgt-----------------gaggcattactgaattaatatttgtaaagtcctttgaacagtTCTCAGGAGGTATGTGT--TTGTCGTC-ATCGTCTCTGTTGCTCTGTCCCTGTGCTGTGCATGACAGTAAGTATGACAATATGTCCAGCCTTTGTCTCTG-ATGCTCCCAGTTCATTTGGAAAGGGAGAGCGCAT--AGCTAATGA----CAGAGACAGCAGAGGCTGCAGGAG-TCAGAACAGGCTCCTTGGGAACTGAGGTAGCCCAAGATGGTTTCATCAAAAGTGTGGATATTAAATATG-GTAATTTCTA-----------GACGG---------------------ACACAAAGGAACTTTTTCGAAGG---GTG-TGTGTCCCAGCCAGCATGAAGCAGGCGGAGGAAACAGAAACAAGACAAGAGCTTTGAGGAGGCCTGAAATT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 398676 481 - 4471408 caagatggcttgggttcaaggcctgcctctgc------------------------------------------cttgacctcagtttacctcctctgaaaat-ggggagg----tagtgatacctgcctcctggggttgt-----------------gaggcattactgaattgatatttgtaaagtcctttgaacagtTCTCAGGAGGTATGTGT--TTGTCGTC-GTCGTCTCTGTTGCTCTGTCCCAGTGCTGTGCATGACAGTAAGTATGAAGATATGTCCAGCCTTTGTCTCTG-ATGCTCCCAGTTCATTTGGAAAGGGAGAGCACAC--AGCTAATGA----CAGAGACAGCAGAGCCTGCAGGAG-TAAGAAAAGGCTCCTCGAGAACTGAGGTAGCCCGAGATGGTTTCATCAAAAGGGTGGATATTAAATATG-GTAATTTCTA-----------GACAG---------------------ACACAAAGGAACTTTTTCCAAGG---GTG-TGTGTACCAGCCAGCATGAAGCAGGCGGAAGAAACAGAAACAAGACAAGAGCTTTGAGGAGGCctgaaatt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5519915 436 + 5549422 CTGGATTGCTTGAGTTAAagtt---------------------------------------------------------------tatacctcatctgaaaat-ggaggag------ataatacctatct-ctggggttatag--------------tagggctctaatgagttaatatttgtaaagtccttagaacgattcc---------tgTGT--TTTTTG----TTGTCCGTGTTGCTATGGCCCTGTGCTGTGCACCACAGAAAATGTGAAGATGTGCCCAGCCT-GGTTTCTG-GTGCTTAC-------------AGGGAAGGCACACAAAGCTGACAA----TAG-----GCAGAGGCCGCAGCCGCTCAGGAAGGGTGCCATGGGAACTGAAGTGGCTCAAGATGGTTTCATCAAAACAGTGGGTATTAAATATGGATAATTTCTA-----------GGAAAAATT-----------GGATGAGCATGAAAGGACTTGTTCAAAGG---GGG-TGTGTCCTAGACAACCTGAGATAG------GAATCAGAGATAGAA-AAGTGCTTTCAGAGGGCctgaaact i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4649909 556 - 122678785 ccagacttcttgtgttcggtttctgtctctgccatgtactaattgt-taatctc--ttaagtcacac--cctctctttacctcattttaccccatctgaaaat-gggggggggggtaacactagctacctcttggagttacagagttacagttaagttacagtgtaaattagttaatatttgtgacgtctttggaacgcttcttggcCGGTATGTTTTCTTGTTG----GTGGTGATGTTGTTGTGGCTTTGTACTGTGTACCGCCGTGCATCTGAAGAGGGGTCCA--CCCTGTCTCTGTGCATTTACAGTTCTTGTTGAACGGGCCGGCAAACAAAGCTAGCAACAAGCAGTGGCAGTGGAGGCTGCAGGAGCTCAGGACAGCCTCCAAGAGGACCGAAGGGGCCCAAGATGGTTTCATCCAAACAGTGAAGCTTAAATATGGCTAACATCTA-----------GAAAAAGTGAAGGGGAAGAAAAAAGGGCACACAGGGACTTGTTTTGGGG---GTGATGTGT--------GCCCCAGACAGACAGAAAAATAAGA--CAGGA-AAGAGCCTGAAGGGAGCccgaaatt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 386929 526 + 643850 CAagtctgcttggattcaaatcctgcctctaccgcttattagctctgtgatcttgggtaagtcatataacctctctttatctcagctaaccctatctgaatatagggaagg----tcatagtttctacctcatggggtcatag--------------tgaggtttaaatgagttaatatttgtaaagtgcatagaacagttcctggcaAGTATGGTT--TTTTTTTTAATTGTCAGTGTTATAA----CCTGTACTGTACACTTCAATAAG---------------------TGTCTGTC-ATGCTTCCAATTTACCTGGTAATGGAAGGTATACAAAGCTAGTGGCCAGCAGAGGCAGCCAAGGCTGCAGGAGCTCAGGAAAGGCTCCATGGGAACTAAAGAAGTCCCAGATGGTTTCATCAGAACAGTGGATCTTATATATGAGGAACTGAGAAAAAGTGAAAGGGGAGAA---------------AAGAGCATAAAGGGACTTGTTCCAAGGACAGTG-TTTGTTCCAGACAG----ATGAATGCAGAAGAATTAGAGACAGGA-AAGAACCTTGAGGGGACctgaaatt i dasNov3.JH563638 I 548 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e mm10.chr7 111132813 2347 - 145441459 I a score=171280.000000 s hg38.chr19_GL383574v1_alt 119287 16 + 155864 TGGACGtgtcatgtga s panTro5.chr19 36186910 16 + 61309027 TGGAcatgtcatgtga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931143 16 + 64411610 TGGACATGTCATGTGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6342843 16 - 8369475 TGGAcatgtcacgtga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940033 16 - 106955855 gggacatgtcatcaca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30254956 16 + 53671032 gggacatgtcatgtga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34708867 16 + 59248254 gggacatgtcatgtga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581283 16 - 13342542 gggacatgtcatgtga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5505772 16 + 7714307 gggaaatgtcatgtga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29310904 16 + 50890351 gggacatgtcatgtga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941405 16 - 2385121 gggacatgtcatgtga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384132 16 + 4274983 gggacatgtcatgtga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596230 16 + 49145316 gggatatgtcatgtga i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5443436 16 + 8899380 cggatatgtcgtgtga i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1652018 16 - 2680843 GGGATATGTTGTGTGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 399157 16 - 4471408 gggatatgtcgtgtga i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5520351 16 + 5549422 gggctatgtcatgtga i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 387455 16 + 643850 gggatatgttatgtta i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e mm10.chr7 111132813 2347 - 145441459 I e canFam3.chr1 4650465 0 - 122678785 C a score=12013.000000 s hg38.chr19_GL383574v1_alt 119303 3 + 155864 tga s panTro5.chr19 36186926 3 + 61309027 tga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931159 3 + 64411610 TGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6342859 3 - 8369475 tga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940049 3 - 106955855 tga i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28596246 3 + 49145316 taa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5443452 3 + 8899380 tga i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1652034 3 - 2680843 TGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 399173 3 - 4471408 tga i aotNan1.NW_018505377v1 C 0 I 2 s otoGar3.GL873654 5520367 3 + 5549422 tgg i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 387471 3 + 643850 tgg i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e mm10.chr7 111132813 2347 - 145441459 I e chlSab2.chr6 29310920 0 + 50890351 C e canFam3.chr1 4650465 0 - 122678785 C e colAng1.NW_012111697v1 2384148 0 + 4274983 C e manLeu1.NW_012102454v1 941421 0 - 2385121 C e cerAty1.NW_012005268v1 5505788 0 + 7714307 C e macNem1.NW_012011689v1 4581299 0 - 13342542 C e macFas5.chr19 34708883 0 + 59248254 C e rheMac8.chr19 30254972 0 + 53671032 C a score=11247.000000 s hg38.chr19_GL383574v1_alt 119306 6 + 155864 catgtc s panTro5.chr19 36186929 6 + 61309027 catgtc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931162 6 + 64411610 CATGTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6342862 6 - 8369475 catgtc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940052 6 - 106955855 catgtc i nomLeu3.chr10 C 0 C 0 s otoGar3.GL873654 5520370 6 + 5549422 catgtc i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 387474 6 + 643850 catgtt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e mm10.chr7 111132813 2347 - 145441459 I e chlSab2.chr6 29310920 0 + 50890351 C e canFam3.chr1 4650465 0 - 122678785 C e aotNan1.NW_018505377v1 399176 2 - 4471408 I e cebCap1.NW_016107633v1 1652037 0 - 2680843 C e saiBol1.JH378197 5443455 0 + 8899380 C e calJac3.chr22 28596249 0 + 49145316 C e colAng1.NW_012111697v1 2384148 0 + 4274983 C e manLeu1.NW_012102454v1 941421 0 - 2385121 C e cerAty1.NW_012005268v1 5505788 0 + 7714307 C e macNem1.NW_012011689v1 4581299 0 - 13342542 C e macFas5.chr19 34708883 0 + 59248254 C e rheMac8.chr19 30254972 0 + 53671032 C a score=4036.000000 s hg38.chr19_GL383574v1_alt 119312 14 + 155864 ttttttttttt-----------gga s panTro5.chr19 36186935 23 + 61309027 ttttttttttt--tttttttttaga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931168 19 + 64411610 ttttttttttt------tttttata i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6342868 24 - 8369475 ttttttttttt-ttttttttttgga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940058 25 - 106955855 tttttttttttttttttttttttcc i nomLeu3.chr10 C 0 C 0 s dasNov3.JH563638 387480 14 + 643850 -----------atcatttacttggc i dasNov3.JH563638 C 0 I 184 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e otoGar3.GL873654 5520376 0 + 5549422 C e mm10.chr7 111132813 2347 - 145441459 I e chlSab2.chr6 29310920 0 + 50890351 C e canFam3.chr1 4650465 0 - 122678785 C e aotNan1.NW_018505377v1 399176 2 - 4471408 I e cebCap1.NW_016107633v1 1652037 0 - 2680843 C e saiBol1.JH378197 5443455 0 + 8899380 C e calJac3.chr22 28596249 0 + 49145316 C e colAng1.NW_012111697v1 2384148 0 + 4274983 C e manLeu1.NW_012102454v1 941421 0 - 2385121 C e cerAty1.NW_012005268v1 5505788 0 + 7714307 C e macNem1.NW_012011689v1 4581299 0 - 13342542 C e macFas5.chr19 34708883 0 + 59248254 C e rheMac8.chr19 30254972 0 + 53671032 C a score=220310.000000 s hg38.chr19_GL383574v1_alt 119326 253 + 155864 gggggggacggagtcttgctctgttgcccaggctagaatgcagtggcatgatctcagctcactgcaagctctgcctccccggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggtgcccgccaccatgcctggctaattttttgtatttttagtagagacggggtttcactgtgttagccaggatggtcttgatctcctgaccttgtgatccgcccacctcggcctcccaaagtgct s panTro5.chr19 36186958 252 + 61309027 gggggt-atggagtcttgctctgttgcccaggctgaaatgcagtggcacgatctcagctcactgcaagctctgcctccccggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccaccatgcccggctaattttttgtatttttagtagagacggggtttcactgtgttagccaggatggtcttgatctcctgaccttgtgatccgcccgcctcggcctcccgaagtgct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931187 252 + 64411610 gggggg-atggagtcttgctctgttgcccaggctgaaatgcagtggcacgatctcagctcactgcaagctctgcctccccggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccaccatgcccggctaattttttgtgtttttagtagagacggggtttcactgtgttagccagaatggtcttgatctcctgaccttgtgatccgcccgcctcggcctcccgaagtgct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6342892 253 - 8369475 gggggggacggagtcttgctctgttgcccaggctggagtgcagtggcatgatctcagctcactgcaagctctgcctccccggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccaccatgcccggctaattttttgtatttttagtagagatggggtttcactgtgttagccaggatggtcttgatctcctgaccttgtgatccgcccgcctcggcctcccaaagtgct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940083 246 - 106955855 tggggg-acggagtctcactctgttgcccaggctggagtgcagtggcacaatctcagctcactgcaagctctgcctcctgggttcacgccgttctcctgcctcagcctcccgagtagctgggactacaggtgctcgccacc------ggctaattttttgtatttttagtagagacggggtttcactgtgttaaccaggatggtcttgatctcctgaccttgtgatccacctgccttggcctcccaaagtgct i nomLeu3.chr10 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e dasNov3.JH563638 387494 184 + 643850 I e otoGar3.GL873654 5520376 0 + 5549422 C e mm10.chr7 111132813 2347 - 145441459 I e chlSab2.chr6 29310920 0 + 50890351 C e canFam3.chr1 4650465 0 - 122678785 C e aotNan1.NW_018505377v1 399176 2 - 4471408 I e cebCap1.NW_016107633v1 1652037 0 - 2680843 C e saiBol1.JH378197 5443455 0 + 8899380 C e calJac3.chr22 28596249 0 + 49145316 C e colAng1.NW_012111697v1 2384148 0 + 4274983 C e manLeu1.NW_012102454v1 941421 0 - 2385121 C e cerAty1.NW_012005268v1 5505788 0 + 7714307 C e macNem1.NW_012011689v1 4581299 0 - 13342542 C e macFas5.chr19 34708883 0 + 59248254 C e rheMac8.chr19 30254972 0 + 53671032 C a score=845.000000 s hg38.chr19_GL383574v1_alt 119579 1 + 155864 g s panTro5.chr19 36187210 1 + 61309027 g i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931439 1 + 64411610 g i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343145 1 - 8369475 g i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940329 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s otoGar3.GL873654 5520376 1 + 5549422 a i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e dasNov3.JH563638 387494 184 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e chlSab2.chr6 29310920 0 + 50890351 C e canFam3.chr1 4650465 0 - 122678785 C e aotNan1.NW_018505377v1 399176 2 - 4471408 I e cebCap1.NW_016107633v1 1652037 0 - 2680843 C e saiBol1.JH378197 5443455 0 + 8899380 C e calJac3.chr22 28596249 0 + 49145316 C e colAng1.NW_012111697v1 2384148 0 + 4274983 C e manLeu1.NW_012102454v1 941421 0 - 2385121 C e cerAty1.NW_012005268v1 5505788 0 + 7714307 C e macNem1.NW_012011689v1 4581299 0 - 13342542 C e macFas5.chr19 34708883 0 + 59248254 C e rheMac8.chr19 30254972 0 + 53671032 C a score=21966.000000 s hg38.chr19_GL383574v1_alt 119580 30 + 155864 ggattatag-gtgtgagccaccacgcccggc s panTro5.chr19 36187211 30 + 61309027 ggattatag-gtgtgagccaccacgcccggc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931440 30 + 64411610 ggattatag-gtgtgagccaccacgcccggc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343146 30 - 8369475 ggattatag-gtgtgagccaccacgcccggc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940330 30 - 106955855 ggattacag-gtgtgagccaccacgcccagt i nomLeu3.chr10 C 0 C 0 s otoGar3.GL873654 5520377 8 + 5549422 gggttata----------------------- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4650465 16 - 122678785 gggatatagcgtgtga--------------- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3990453 558 - 30143674 I e dasNov3.JH563638 387494 184 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I e chlSab2.chr6 29310920 0 + 50890351 C e aotNan1.NW_018505377v1 399176 2 - 4471408 I e cebCap1.NW_016107633v1 1652037 0 - 2680843 C e saiBol1.JH378197 5443455 0 + 8899380 C e calJac3.chr22 28596249 0 + 49145316 C e colAng1.NW_012111697v1 2384148 0 + 4274983 C e manLeu1.NW_012102454v1 941421 0 - 2385121 C e cerAty1.NW_012005268v1 5505788 0 + 7714307 C e macNem1.NW_012011689v1 4581299 0 - 13342542 C e macFas5.chr19 34708883 0 + 59248254 C e rheMac8.chr19 30254972 0 + 53671032 C a score=23192.000000 s hg38.chr19_GL383574v1_alt 119610 3 + 155864 tgg s panTro5.chr19 36187241 3 + 61309027 tgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931470 3 + 64411610 TGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343176 3 - 8369475 tgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940360 3 - 106955855 cgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30254972 3 + 53671032 tgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34708883 3 + 59248254 tgg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581299 3 - 13342542 tgg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5505788 3 + 7714307 tgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29310920 3 + 50890351 tgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941421 3 - 2385121 tgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384148 3 + 4274983 tgg i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3991011 3 - 30143674 tgg i micMur3.chr22 I 558 C 0 s canFam3.chr1 4650481 3 - 122678785 tga i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e dasNov3.JH563638 387494 184 + 643850 I e otoGar3.GL873654 5520385 0 + 5549422 C e mm10.chr7 111132813 2347 - 145441459 I e aotNan1.NW_018505377v1 399176 2 - 4471408 I e cebCap1.NW_016107633v1 1652037 0 - 2680843 C e saiBol1.JH378197 5443455 0 + 8899380 C e calJac3.chr22 28596249 0 + 49145316 C a score=25976.000000 s hg38.chr19_GL383574v1_alt 119613 2 + 155864 ca s panTro5.chr19 36187244 2 + 61309027 ca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931473 2 + 64411610 CA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343179 2 - 8369475 ca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940363 2 - 106955855 ca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30254975 2 + 53671032 ca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34708886 2 + 59248254 ca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581302 2 - 13342542 ca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5505791 2 + 7714307 ca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29310923 2 + 50890351 ca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941424 2 - 2385121 ca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384151 2 + 4274983 ca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596249 2 + 49145316 ca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5443455 2 + 8899380 ca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1652037 2 - 2680843 CA i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3991014 2 - 30143674 ca i micMur3.chr22 C 0 C 0 s canFam3.chr1 4650484 2 - 122678785 ca i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e dasNov3.JH563638 387494 184 + 643850 I e otoGar3.GL873654 5520385 0 + 5549422 C e mm10.chr7 111132813 2347 - 145441459 I e aotNan1.NW_018505377v1 399176 2 - 4471408 I a score=383294.000000 s hg38.chr19_GL383574v1_alt 119615 32 + 155864 tgtcatTGTTATATGGCAGAGTTTTTCTTGGC-- s panTro5.chr19 36187246 32 + 61309027 tgtcatTGTTACATGGCAGAGTTTTTCTTGGC-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931475 32 + 64411610 TGTCATTGTTACATGGCAGAGTTTTTCTTGGC-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343181 32 - 8369475 tgtcatTGTTATATGGCAGAGTTTTTCTTGGC-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940365 32 - 106955855 tgtcattgttatatggcagagtttttcttggc-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30254977 34 + 53671032 tgtcattgttatatggcagagtttttcttggcat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34708888 34 + 59248254 tgtcattgttatatggcagagtttttcttggcat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581304 34 - 13342542 tgtcattgttatatggcagagtttttcttggcat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5505793 34 + 7714307 tgtcattgttatatggcagagtttttcttggcat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29310925 34 + 50890351 cgtcattgttatatggcagagtttttcttggcat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941426 34 - 2385121 tgtcattgttatatggcagagtttttcttggcat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384153 34 + 4274983 tgtcattgttatatggcagagtttttcttggcat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596251 32 + 49145316 tgtcactgttatatggcagagtttttcttggc-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5443457 32 + 8899380 tgtcattgttataaggcagagtttttattgac-- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1652039 32 - 2680843 TGTCATTGTTATATGGCACAGTTTTTCTTGGC-- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 399178 32 - 4471408 tgtcgttgttatatggcagagtttttcttggt-- i aotNan1.NW_018505377v1 I 2 C 0 s micMur3.chr22 3991016 29 - 30143674 tgtcattgt---atggcagagttttccttagc-- i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5520385 19 + 5549422 -------------tggcagagtttttcttagc-- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4650486 30 - 122678785 ggtcatcgttatgtggc--aatttttcttagc-- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e dasNov3.JH563638 387494 184 + 643850 I e mm10.chr7 111132813 2347 - 145441459 I a score=1319976.000000 s hg38.chr19_GL383574v1_alt 119647 98 + 155864 ATATATGAGACAATGATATGATTTGTAAATGGTGACATCTTTGACTCAGTGAAGTGTGGTTG---CTCTGCCTTGATGTTTGGAATGGCTATGAGGTGTT-C s panTro5.chr19 36187278 97 + 61309027 GTATATGAGGCAATGATATGATTTGTAAATGGTGACATCTTTGACTCAGTGAAGTGTGGT-G---CTCTGCCTTGATGTTTGGAATGGCTGTGAGGTGTT-C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931507 97 + 64411610 GTATATGAGGCAATGATATGATTTGTAAATGGTGACATCTTTGACTCAGTGAAGTGTGGT-G---CTCTGCCTTGATGTTTGGAATGGCTGTGAGGTGTT-C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343213 98 - 8369475 GTATATGAGACAATGATATGATTTGTAAATGGTGACATCTTTGACTCAGTGAAGTGTGGTTG---CTCTGCCTTGATGTTTGGAATGGCTGTGAGGTGTT-C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940397 99 - 106955855 gtatatgagacaatgatatgatttgtaaatgatgtcatctttgactcagtgaagtgtggTTG---CTCTGCCTTGATGTTTGGAATGGCTGTGAGGTGTTCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255011 99 + 53671032 atatatgagacaatgatatgatttgtagatgacggcatctttgactcaatgaagtgtggTGG---CTCTGCCTTGATGTTTGGAATGGCTGTGAGGTGTTCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34708922 99 + 59248254 atatatgagacaatgatatgatttgtagatgacggcatctttgactcaatgaagtgtggTGG---CTCTGCCTTGATGTTTGGAATGGCTGTGAGGTGTTCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581338 99 - 13342542 atatatgagacaatgatatgatttgtagatgacggcatctttgactcaatgaagtgtggTGG---CTCTGCCTTGATGTTTGGAATGGCTGTGAGGTGTTCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5505827 99 + 7714307 atatatgagacaatgatatgatttgtaaatgacggcatctttgactcaatgaagtgtggTGG---CTCTGCCTTGATGTTTGGAATGGCTGTGAGGTGTTCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29310959 99 + 50890351 atatatgagacaatgatatgatttgtaaatgacggcatctttgactcaatgaagtgtggTGG---CTCTGCCTTGATGTTTGGAATGGCAGTGAGGTGTTCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941460 99 - 2385121 atatatgagacaatgatatgatttgtaaatgacagcatctttgactcaatgaagtgtggTGG---CTCTGCCTTGATGTTTGGAATGGCTGTGAGGTGTTCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384187 99 + 4274983 atatatgagacaatgatatgatttgtaaatgacggcatctttgactcaatgaagtgtggTGG---CTCTGCCTTGATGTTTGGAATGGCTGTGAGGTGTTCC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596283 99 + 49145316 gtatatgagacagtgatacaatttctaaacgatggcatctttgactcagtgaagtgtggTGG---CTCTGCTTTGATATTTGGAATGGCTGTGGGGTGCTCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5443489 99 + 8899380 gtatatgagacagtgatacgatttctaaatgatgacatctttgactcagtgaagtgtggTGG---CTCTGCTTTGATGTTTGGAATGGCTGTGAGGTGCTCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1652071 99 - 2680843 GTGTATGAGACAGTGGTACGATTTCTAAATGATGGCCTCTTTGACTCAGTGAAGTGTGGTGG---CTCTGCTTTGAAGTTTGGAATGGCTGTGAGGTGCCCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 399210 99 - 4471408 gtatatgagacagtgatatgatttctaaatgatggcatctttgattcagtgaagtgtggTGG---CTCTGCTTTGATGTTTGGAATGGCTGTGAGGTGCTCC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3991045 98 - 30143674 atatataagataataatatgatttataaatgatgacatcttagactcattgaaatgtggTGG---CTTTACCTTGATCTTTGAAATGACTGTGAGGTGTTC- i micMur3.chr22 C 0 I 64 s otoGar3.GL873654 5520404 97 + 5549422 atatataagataatgatatgatttacaaatgatggcatcttagacttaataaaatgtggTGG---CTTTACCTTGATCTTTGAAA-GGCTGTGAGGTGTTC- i otoGar3.GL873654 C 0 I 1 s canFam3.chr1 4650516 95 - 122678785 atatataaaataatgatatgatttataaatga---catcttaggcttgatgaaatgtggTAG---CTGTACCTTGATCTTTGAAATGGCCATGAGGTGTTC- i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 387678 94 + 643850 aaaaatgaaaaaATAAAA-------TAAATCACGGCATCTTAGACTCAACAAAATGCGCTAGCAACTCTACCTAGATCTTTGAAATGTCTGTAAGGTGCTC- i dasNov3.JH563638 I 184 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e mm10.chr7 111132813 2347 - 145441459 I a score=457718.000000 s hg38.chr19_GL383574v1_alt 119745 38 + 155864 -TGTG---TGACGTATTTAACAATCCTCGTAATGCAGGGCAC s panTro5.chr19 36187375 38 + 61309027 -TGTG---TGATGTATTTAACAATCCTCGTAATGCAGGGCAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931604 38 + 64411610 -TGTG---TGATGTATTTAACAATCCTCGTAATGCAGGGCAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343311 38 - 8369475 -TGTG---TGATGTATTTAACAATCCTCGTAATGCAGGGCAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940496 38 - 106955855 -TGTG---TGATGTATTTAACAATCCTCGTAATGCAGGGCAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255110 38 + 53671032 -TGTG---TGATGTATTTAACAATCCTCGTAATGCAGGGCAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709021 38 + 59248254 -TGTG---TGATGTATTTAACAATCCTCGTAATGCAGGGCAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581437 38 - 13342542 -TGTG---TGATGTATTTAACAATCCTCGTAATGCAGGGCAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5505926 38 + 7714307 -TGTG---TGATGTATTTAACAATCCTCGTAATGCAGGGCAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311058 38 + 50890351 -TGTG---TGATGTATTTAACAATCCTCGTAATGCAGGGCAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941559 38 - 2385121 -TGTG---TGATGTATTTAACAATCCTCGTAATGCAGGGCAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384286 38 + 4274983 -TGTG---TGATGTATTTAACAATCCTCGTCATGCAGGGCAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596382 41 + 49145316 -TATGTGATGATGTATTTAACAATCCTCGTAATGCAGGGCAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5443588 41 + 8899380 -TATGTGATGATGTATTTAACAATCCTTGTAATGCAGGGCAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1652170 41 - 2680843 -TATGTGATGATGTATTTAACAATCCTCGTAATGCAGGGCAC i cebCap1.NW_016107633v1 C 0 I 30 s aotNan1.NW_018505377v1 399309 41 - 4471408 -TATGTGATGATGTATTTAGCAATCCTCGTAATGCAGGGTAC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5520502 38 + 5549422 -TATG---TAATTTATTTAATAAACCCCTTACAGCAGGACAT i otoGar3.GL873654 I 1 C 0 s canFam3.chr1 4650612 38 - 122678785 -TGTG---taaattctttaatgaatcccttaatgcggaacat i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 387772 39 + 643850 CAGGG---TAATTTATTTAATGAACCCCTTTTTGTAGGACAT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3991143 64 - 30143674 I e mm10.chr7 111132813 2347 - 145441459 I a score=33742.000000 s hg38.chr19_GL383574v1_alt 119783 6 + 155864 GTGGG--------A s panTro5.chr19 36187413 6 + 61309027 GTGGG--------A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931642 6 + 64411610 GTGGG--------A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343349 6 - 8369475 GTGGG--------A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940534 14 - 106955855 GTGGGTTATTGCTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255148 14 + 53671032 GTGGGTTATTGCTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709059 14 + 59248254 GTGGGTTATTGCTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581475 14 - 13342542 GTGGGTTATTGCTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5505964 14 + 7714307 GTGGGTTATTGCTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311096 14 + 50890351 GTGGGTTATTGCTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941597 14 - 2385121 GTGGGTTATTGCTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384324 14 + 4274983 GTGGGTTATTGCTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596423 9 + 49145316 GTGAGTTAT----- i calJac3.chr22 C 0 I 21 s saiBol1.JH378197 5443629 9 + 8899380 GTGAGTTAT----- i saiBol1.JH378197 C 0 I 21 s aotNan1.NW_018505377v1 399350 9 - 4471408 GTGAGTTAT----- i aotNan1.NW_018505377v1 C 0 I 21 s otoGar3.GL873654 5520540 14 + 5549422 GTGGGTTACTTCCA i otoGar3.GL873654 C 0 I 11 s canFam3.chr1 4650650 6 - 122678785 gtgggt-------- i canFam3.chr1 C 0 I 19 s dasNov3.JH563638 387811 6 + 643850 GTGGGT-------- i dasNov3.JH563638 C 0 I 19 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e micMur3.chr22 3991143 64 - 30143674 I e mm10.chr7 111132813 2347 - 145441459 I e cebCap1.NW_016107633v1 1652211 30 - 2680843 I a score=29340.000000 s hg38.chr19_GL383574v1_alt 119789 5 + 155864 ATAAC s panTro5.chr19 36187419 5 + 61309027 ATAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931648 5 + 64411610 ATAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343355 5 - 8369475 ATAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940548 5 - 106955855 ATAGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255162 5 + 53671032 ATAGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709073 5 + 59248254 ATAGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581489 5 - 13342542 ATAGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5505978 5 + 7714307 ATAGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311110 5 + 50890351 ATAGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941611 5 - 2385121 ATAGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384338 5 + 4274983 ATAGC i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 3991207 2 - 30143674 ---GT i micMur3.chr22 I 64 I 3 s otoGar3.GL873654 5520565 2 + 5549422 ---GC i otoGar3.GL873654 I 11 I 3 s canFam3.chr1 4650675 5 - 122678785 gtaga i canFam3.chr1 I 19 C 0 s dasNov3.JH563638 387836 5 + 643850 GTAGA i dasNov3.JH563638 I 19 C 0 e proCoq1.NW_012149263v1 605793 1015 + 2501019 I e mm10.chr7 111132813 2347 - 145441459 I e aotNan1.NW_018505377v1 399359 21 - 4471408 I e cebCap1.NW_016107633v1 1652211 30 - 2680843 I e saiBol1.JH378197 5443638 21 + 8899380 I e calJac3.chr22 28596432 21 + 49145316 I a score=1245113.000000 s hg38.chr19_GL383574v1_alt 119794 99 + 155864 CAGTGTTGCCAGTGAGTGTTCTTGACGCAGGCCTCTACATTAACCGTGAGTCTG-TTCTAGGATTCGTGCCTAGATAGAATATTGCTTTTCTT--TC-TTTT--T s panTro5.chr19 36187424 99 + 61309027 CAGTGTTGCCAGTGAGTGTTCTTGACGCAGGCCTCTACATTAACTGTGAGTCTG-TTCTAGGATTCGTGCCTAGATAGAATATTGCTTTTCTT--TC-TTTT--T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931653 100 + 64411610 CAGTGTTGCCAGTGAGTGTTCTTGACGCAGGCCTCTACATTAACTGTGAGTCTG-TTCTAGGATTCGTGCCTAGATAGAATATTGCTTTTCTT--TCTTTTT--T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343360 99 - 8369475 CAGTGTTGCCAGTGAGTGTTCTTGACGCAGGCCTCTACATTAACTGTGAGTCTG-TTCTAGGATTCGTGCCTAGATAGAATATTGATTTTCTT--TC-TTTT--T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940553 99 - 106955855 CAGTGTTGCCAGTGAGTGTTCTTGTCGCAGGCCTCTACATTAACCGTGAGTCTG-TTCTAGGATTCGTGCCTAGATAGAGTGTGGCTTTTCTT--TC-TTTT--T i nomLeu3.chr10 C 0 I 3 s rheMac8.chr19 30255167 96 + 53671032 CAGTGTTGCTAGTGAGTGTTCTTGACGCAGGCTTCTACATTAACTGTGAGTCTG-TTTTAGGATTCATGCCTAGATAGAGTATTGCTTTC-----TT-TTTT--T i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709078 96 + 59248254 CAGTGTTGCTAGTGAGTGTTCTTGACGCAGGCTTCTACATTAACTGTGAGTCTG-TTTTAGGATTCATGCCTAGATAGAGTATTGCTTTC-----TT-TTTT--T i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581494 96 - 13342542 CAGTGTTGCTAGTGAGTGTTCTTGACGCAGGCTTCTACATTAACTGTGAGTCTG-TTTTAGGATTCATGCCTAGATAGAGTATTGCTTTC-----TT-TTTT--T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5505983 98 + 7714307 CAGTGTTGCTAGTGAGTGTTCTTGACGCAGGCTTCTACATTAACCGTGAGTCTG-TTTTAGGATTCATGCCTAGATAGAGTATTGCTTTCCT---TT-TTTT--T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311115 98 + 50890351 TAGTGTTGCTAGTGAGTGTTCTTGACGCAGGCTTCTACATTAACCGTGAGTCTG-TTCTAGGATTCATGCCTAGATAGAGTATTGCTTTCCT---TT-TTTT--T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941616 98 - 2385121 CAGTGTTGCTAGTGAGTGTTCTTGACGCAGGCTTCTACATTAACCGTGAGTCTG-TTTTAGGATTCATGCCTAGATAGAGTATTGCTTTCCT---TT-TTTT--T i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384343 101 + 4274983 CAGTGTTGCTAGTGAGTGTTCTTGACGCAGGCTTCTACATTAACTGTGAGTGTG-TTCTAGGATTCATGCCTAGATAGAGTATTGCTTTCCTTTCTT-TTTT--T i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596453 100 + 49145316 CAGTGCTACCAGTGAGTGTATGTGACACAGGCCTCTATGTTAACCATTAGTCTGTTTCTAGGATTCATACCTATATATGGTATTGCTTTTCTT--TT-CTCT--T i calJac3.chr22 I 21 C 0 s saiBol1.JH378197 5443659 100 + 8899380 CAGTGCTGCCAGTGAGCGTACTTGACATAGGCTTCTGCATTAACCATGAGTCTGTTTCTAGGATTCATGCCTAGATATGGTATCGCTtttctt--tc-tttc--t i saiBol1.JH378197 I 21 I 495 s cebCap1.NW_016107633v1 1652241 100 - 2680843 CAGTGCTGCCAGTGAGTGTACTTCACATAGGCCTCTACGTTAACCATGAGTCTGTTTCTAGGATTCATGCCTAGATATGGCAttgcttttctt--tc-tttt--c i cebCap1.NW_016107633v1 I 30 C 0 s aotNan1.NW_018505377v1 399380 100 - 4471408 CAGTGCTGCCAGTGAGTGTACTTGACACAGACCTCTACGTTAACCATGAGTCTGTTTCTAGGATTCATGCCTAGATATGGTATTGCttttctt--tc-tttc--t i aotNan1.NW_018505377v1 I 21 I 13 s micMur3.chr22 3991212 100 - 30143674 CAGTGCTGCCTGTGAGTGTTCTTGATGTAGGCCTCTACGTTTACTGTGAGTCTATTTCTAGGATTCATTTCTACATACAATATTACTTTTTTT--TT-TTTT--T i micMur3.chr22 I 3 C 0 s proCoq1.NW_012149263v1 606808 102 + 2501019 cagtgctgccagtgagtgttcttgacgtaggcctctacgtttactgtgagtctatttctaggattcatttctagatgtagtattactTTTTTT--TT-TTTTTCT i proCoq1.NW_012149263v1 I 1015 C 0 s otoGar3.GL873654 5520570 90 + 5549422 CACTGCTACCAGGAAGTGTTCTTGATATAGGCCTCTACATTTACTGTGAATCTACTTCTAGGATTCATTTCTAGAT----------TTTTTAT--TT-TTTT--T i otoGar3.GL873654 I 3 C 0 s canFam3.chr1 4650680 86 - 122678785 cagagctcccagtgagtgtctttgatataggtctctacatttac--tgagtctatttctaggattcatttctagaTGGTCTGTTTTTT----------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 387841 89 + 643850 CAGTGCTGTCAGTGAGTGTCTTTGATACAGACC-CTACATTTACTGTGCGA----TTCTAGGATTCTTTTCT-GATGTAGTATCTCTTTC-----TC-TCT---- i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111132813 2347 - 145441459 I a score=30930.000000 s hg38.chr19_GL383574v1_alt 119893 3 + 155864 TTT s panTro5.chr19 36187523 3 + 61309027 TTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931753 3 + 64411610 TTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343459 3 - 8369475 TTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940655 3 - 106955855 TTT i nomLeu3.chr10 I 3 C 0 s rheMac8.chr19 30255263 3 + 53671032 TTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709174 3 + 59248254 TTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581590 3 - 13342542 TTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506081 3 + 7714307 TTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311213 3 + 50890351 TTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941714 3 - 2385121 TTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384444 3 + 4274983 TTT i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5444254 3 + 8899380 TTT i saiBol1.JH378197 I 495 C 0 s cebCap1.NW_016107633v1 1652341 3 - 2680843 ttt i cebCap1.NW_016107633v1 C 0 I 89 s aotNan1.NW_018505377v1 399493 3 - 4471408 ttt i aotNan1.NW_018505377v1 I 13 C 0 s canFam3.chr1 4650766 3 - 122678785 TTT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 606910 0 + 2501019 C e micMur3.chr22 3991312 0 - 30143674 C e dasNov3.JH563638 387930 0 + 643850 C e otoGar3.GL873654 5520660 0 + 5549422 C e mm10.chr7 111132813 2347 - 145441459 I e calJac3.chr22 28596553 0 + 49145316 C a score=35762.000000 s hg38.chr19_GL383574v1_alt 119896 6 + 155864 AAGTCA s panTro5.chr19 36187526 6 + 61309027 AAGTCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931756 6 + 64411610 AAGTCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343462 6 - 8369475 AAGTCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940658 6 - 106955855 AAGTCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255266 6 + 53671032 CAGTCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709177 6 + 59248254 CAGTCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581593 6 - 13342542 CAGTCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506084 6 + 7714307 CAGTCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311216 6 + 50890351 CAGTCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941717 6 - 2385121 CAGTCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384447 6 + 4274983 TAGTTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596553 2 + 49145316 ----CT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5444257 6 + 8899380 TTGTCT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 399496 6 - 4471408 tagtct i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3991312 5 - 30143674 -AACCA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 606910 5 + 2501019 -AGCCG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5520660 5 + 5549422 -AACCA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4650769 6 - 122678785 AAACTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 387930 5 + 643850 -AACCA i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111132813 2347 - 145441459 I e cebCap1.NW_016107633v1 1652344 89 - 2680843 I a score=966438.000000 s hg38.chr19_GL383574v1_alt 119902 60 + 155864 TTTTGATTATGTTCCTTGTGTCTGGGCCACTGTC-AGTTAAGTGTGTTTTCAAATTGGCAG s panTro5.chr19 36187532 60 + 61309027 TTTTGATTATGTTCCTTGTGTCTGGGCCACTGTC-AGTTAAGTGTGTTTTCAAATTGACAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931762 60 + 64411610 TTTTGATTATGTTCCTTGTGTCTGGGCCACTGTC-AGTTAAGTGTGTTTTCAAATTGACAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343468 60 - 8369475 TTTTGATTATGTTCCTTGTGTCTGGGCCACTGTC-AGTTAAGTGTGTTTTCAAATTGACAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940664 60 - 106955855 GTTTAATTATGTTCCTGGTGTCTGCGCCACTGTC-AGTTAAGTGTGTTTTCAAATTGACAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255272 60 + 53671032 TTTTGATTATGTTCCTTGTGTCTGGGCCACTGTC-AGGTAAGTGTTTTTTCAAACTGACAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709183 60 + 59248254 TTTTGATTATGTTCCTTGTGTCTGGGCCACTGTC-AGGTAAGTGTTTTTTCAAACTGACAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581599 60 - 13342542 TTTTGATTATGTTCCTTGTGTCTGGGCCACTGTC-AGGTAAGTGTTTTTTCAAACTGACAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506090 60 + 7714307 TTTTGATTATGTTCCTTGTGTCTGGGCCACTGTC-AGGTAAGTGTTTTTTCAAATTGACAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311222 60 + 50890351 TTTTGATTATGTTCCTTGTGTCTGGGCCACTGTC-AGGTAAGTGTTTTTTCAAATTGACAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941723 60 - 2385121 TTTTGATTATGTTCCTTGTGTCTGGGCCACTGTC-AGGTAAGTGTTTTTTCAAATTGACAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384453 60 + 4274983 TTTTGATTATGTTCCTTATGTCTGGGCCACTGTC-AGGTAAGTGTTTTTTCAAATTGACAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596555 59 + 49145316 TTTCGACTGTGTTCCTTGTGTCTGGGCCACTGTC-AGGTAAGTG-TTTTTCAAATTGACCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5444263 60 + 8899380 TTTTGACTGTATTCCTTATGTCTGGGCCACTGTC-AGGTAAGTGTTTTTTCAAATTGGCTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1652433 60 - 2680843 tttTGACTGTGTTCCTTGTGTCTGGGCCACTGTC-AGGTAAGTGTTTTTTCAAATTGGCCT i cebCap1.NW_016107633v1 I 89 C 0 s aotNan1.NW_018505377v1 399502 60 - 4471408 ttttGACTGTGTTCCTTGTGTCTGGGCCACTGTC-AGGTAAGTGTTTTTTCAAATTGGCCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3991317 60 - 30143674 TTTTGACTATGTTCCTTGTGTTTGGGTCACTGTC-AGATAAGTGCTTTTTCAAATTGGCAG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 606915 60 + 2501019 TTTTGACTATGTTCCTTGTGTTTGGGTCACTGTC-AGGTAAGTGCTTTTTCAAATTGGCAG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5520665 60 + 5549422 TTTTGACTATGTTCCTACTGTTTGGGTCATGATC-AGGTAAGTGCTTTTTCAAATTGGCAG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4650775 60 - 122678785 TTTTGACTATGTTCCTTGTGTCTGGGTCACTGTC-TGATATGTGCTTTTTCAAATTGGTAG i canFam3.chr1 C 0 I 190 s dasNov3.JH563638 387935 60 + 643850 -TTTGACTATGGTCTTTGTGTCTGGGCCACTGTCAAGATATGTGCTTTTTAAAATTGGCAG i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111132813 2347 - 145441459 I a score=59394.000000 s hg38.chr19_GL383574v1_alt 119962 4 + 155864 TGGC s panTro5.chr19 36187592 4 + 61309027 TGGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931822 4 + 64411610 TGGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343528 4 - 8369475 TGGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940724 4 - 106955855 TTGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255332 4 + 53671032 TTGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709243 4 + 59248254 TTGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581659 4 - 13342542 TTGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506150 4 + 7714307 TTGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311282 4 + 50890351 TTGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941783 4 - 2385121 TTGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384513 4 + 4274983 TTGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596614 4 + 49145316 TTGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5444323 4 + 8899380 TTGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1652493 4 - 2680843 TTGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 399562 4 - 4471408 TTGC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3991377 4 - 30143674 TTGC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 606975 4 + 2501019 TTGC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5520725 4 + 5549422 CTGC i otoGar3.GL873654 C 0 I 717 s canFam3.chr1 4651025 4 - 122678785 TTGC i canFam3.chr1 I 190 C 0 s dasNov3.JH563638 387995 4 + 643850 TTGG i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111132813 2347 - 145441459 I a score=157630.000000 s hg38.chr19_GL383574v1_alt 119966 10 + 155864 AAAGAATCAT s panTro5.chr19 36187596 10 + 61309027 AAAGAATCAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931826 10 + 64411610 AAAGAATCAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343532 10 - 8369475 AAAGAATCAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940728 10 - 106955855 AAAGAATCAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255336 10 + 53671032 AAAGAATCAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709247 10 + 59248254 AAAGAATCAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581663 10 - 13342542 AAAGAATCAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506154 10 + 7714307 AAAGAATCAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311286 10 + 50890351 AAAGAATCAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941787 10 - 2385121 AAAGAATCAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384517 10 + 4274983 AAAGAATCAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596618 10 + 49145316 AAAGAATCAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5444327 10 + 8899380 AAAGAATCAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1652497 10 - 2680843 AAAGAATCAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 399566 10 - 4471408 AAAGAATCAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3991381 10 - 30143674 AAAGAATTAT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 606979 10 + 2501019 AAAGAATTAT i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4651029 10 - 122678785 AAAGAATCTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 387999 9 + 643850 AAAGAATCA- i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5520729 717 + 5549422 I e mm10.chr7 111132813 2347 - 145441459 I a score=17290.000000 s hg38.chr19_GL383574v1_alt 119976 1 + 155864 A s panTro5.chr19 36187606 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931836 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343542 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940738 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255346 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709257 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581673 1 - 13342542 A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506164 1 + 7714307 A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311296 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941797 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384527 1 + 4274983 A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596628 1 + 49145316 A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5444337 1 + 8899380 A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1652507 1 - 2680843 A i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 399576 1 - 4471408 A i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3991391 1 - 30143674 A i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 606989 1 + 2501019 A i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111135160 1 - 145441459 A i mm10.chr7 I 2347 C 0 s canFam3.chr1 4651039 1 - 122678785 A i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 388008 0 + 643850 C e otoGar3.GL873654 5520729 717 + 5549422 I a score=138649.000000 s hg38.chr19_GL383574v1_alt 119977 8 + 155864 ATGGGAAG s panTro5.chr19 36187607 8 + 61309027 ATGGGAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931837 8 + 64411610 ATGGGAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343543 8 - 8369475 ATGGGAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940739 8 - 106955855 ATGGGAAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255347 8 + 53671032 ATGGGAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709258 8 + 59248254 ATGGGAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581674 8 - 13342542 ATGGGAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506165 8 + 7714307 ATGGGAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311297 8 + 50890351 ATGGGAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941798 8 - 2385121 ATGGGAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384528 8 + 4274983 ATGGGAAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596629 8 + 49145316 ATGGAAAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5444338 8 + 8899380 ATGGAAAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1652508 8 - 2680843 ATGGAAAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 399577 8 - 4471408 ATGGGAAG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3991392 8 - 30143674 ATGGAAAG i micMur3.chr22 C 0 I 182 s proCoq1.NW_012149263v1 606990 8 + 2501019 TTGGGAAG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5521446 8 + 5549422 atAAGGAG i otoGar3.GL873654 I 717 C 0 s mm10.chr7 111135161 8 - 145441459 ATGGGAAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4651040 8 - 122678785 ATGGGATG i canFam3.chr1 C 0 I 35 s dasNov3.JH563638 388008 8 + 643850 ATGTGAAT i dasNov3.JH563638 C 0 C 0 a score=80481.000000 s hg38.chr19_GL383574v1_alt 119985 6 + 155864 -ATTTTT s panTro5.chr19 36187615 6 + 61309027 -ATTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931845 6 + 64411610 -ATTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343551 6 - 8369475 -ATTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940747 6 - 106955855 -ATTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255355 6 + 53671032 -ATTTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709266 6 + 59248254 -ATTTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581682 6 - 13342542 -ATTTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506173 6 + 7714307 -ATTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311305 6 + 50890351 -ATTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941806 6 - 2385121 -ATTTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384536 6 + 4274983 -ATTTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596637 6 + 49145316 -ATTTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5444346 6 + 8899380 -ATTTTT i saiBol1.JH378197 C 0 I 326 s cebCap1.NW_016107633v1 1652516 6 - 2680843 -ATTTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 399585 6 - 4471408 -ACTTTT i aotNan1.NW_018505377v1 C 0 I 326 s proCoq1.NW_012149263v1 606998 6 + 2501019 -Gttttt i proCoq1.NW_012149263v1 C 0 I 357 s otoGar3.GL873654 5521454 6 + 5549422 -GTTTTT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111135169 4 - 145441459 -ATTT-- i mm10.chr7 C 0 C 0 s canFam3.chr1 4651083 6 - 122678785 -GTTTTT i canFam3.chr1 I 35 C 0 s dasNov3.JH563638 388016 5 + 643850 TATTT-- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3991400 182 - 30143674 I a score=16511.000000 s hg38.chr19_GL383574v1_alt 119991 1 + 155864 G s panTro5.chr19 36187621 1 + 61309027 G i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931851 1 + 64411610 G i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343557 1 - 8369475 G i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940753 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255361 1 + 53671032 G i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709272 1 + 59248254 G i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581688 1 - 13342542 G i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506179 1 + 7714307 G i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311311 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941812 1 - 2385121 G i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384542 1 + 4274983 G i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596643 1 + 49145316 G i calJac3.chr22 C 0 I 305 s saiBol1.JH378197 5444678 1 + 8899380 g i saiBol1.JH378197 I 326 C 0 s cebCap1.NW_016107633v1 1652522 1 - 2680843 G i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 399917 1 - 4471408 g i aotNan1.NW_018505377v1 I 326 C 0 s otoGar3.GL873654 5521460 1 + 5549422 G i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111135173 1 - 145441459 G i mm10.chr7 C 0 C 0 s canFam3.chr1 4651089 1 - 122678785 A i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 388021 1 + 643850 G i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 607004 357 + 2501019 I e micMur3.chr22 3991400 182 - 30143674 I a score=52310.000000 s hg38.chr19_GL383574v1_alt 119992 5 + 155864 AAAGT-- s panTro5.chr19 36187622 5 + 61309027 AAAGT-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931852 5 + 64411610 AAAGT-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343558 5 - 8369475 AAAGT-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940754 5 - 106955855 AAAGT-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255362 5 + 53671032 AAAGT-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709273 5 + 59248254 AAAGT-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581689 5 - 13342542 AAAGT-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506180 5 + 7714307 AAAGT-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311312 5 + 50890351 AAAGT-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941813 5 - 2385121 AAAGT-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384543 5 + 4274983 AAAGT-- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596949 5 + 49145316 aaaaT-- i calJac3.chr22 I 305 C 0 s saiBol1.JH378197 5444679 5 + 8899380 aaaaT-- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1652523 5 - 2680843 AAAAT-- i cebCap1.NW_016107633v1 C 0 I 321 s aotNan1.NW_018505377v1 399918 5 - 4471408 aaaAT-- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5521461 5 + 5549422 GATGT-- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111135174 5 - 145441459 AATGT-- i mm10.chr7 C 0 C 0 s canFam3.chr1 4651090 3 - 122678785 --AGT-- i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 388022 5 + 643850 --AGTGT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 607004 357 + 2501019 I e micMur3.chr22 3991400 182 - 30143674 I a score=304234.000000 s hg38.chr19_GL383574v1_alt 119997 24 + 155864 GGAATTAGAGCAAGATATTACCTG s panTro5.chr19 36187627 24 + 61309027 GGAATTAGAGCAAGATATTACCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931857 24 + 64411610 GGAATTAGAGCAAGATATTACCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343563 24 - 8369475 GGAATTAGAGCAAGATATTACCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940759 24 - 106955855 AGAATTAGAGCAAGGTATTACCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255367 24 + 53671032 GGAATTAGAGCGAGATACTACCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709278 24 + 59248254 GGAATTAGAGCGAGATACTACCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581694 24 - 13342542 GGAATTAGAGCGAGATACTACCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506185 24 + 7714307 GGAATTAGAGCGAGATACTACCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311317 24 + 50890351 GGAATTAGAGCGCGATACTACCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941818 24 - 2385121 GGAATTAGAGCGAGATACTACCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384548 24 + 4274983 GAAATTAGAGCGAGATACTACCTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596954 24 + 49145316 GGAATTAGAGCAAGATATTACATG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5444684 24 + 8899380 GGAATTAAAGCAAGATATTACATG i saiBol1.JH378197 C 0 I 1 s cebCap1.NW_016107633v1 1652849 24 - 2680843 GGAATTAGAGCAAGATATTACATG i cebCap1.NW_016107633v1 I 321 C 0 s aotNan1.NW_018505377v1 399923 24 - 4471408 GGAATTAGAGCAAGATATTACATG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5521466 24 + 5549422 GGAATTAGAGCTATATATTACTTG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111135179 24 - 145441459 AGACTTAGAGCTAGATACTAGCAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4651095 24 - 122678785 AGAATTAGAGCTAGATATTACCTG i canFam3.chr1 I 2 C 0 s dasNov3.JH563638 388027 7 + 643850 GGAATTG----------------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 607004 357 + 2501019 I e micMur3.chr22 3991400 182 - 30143674 I a score=26302.000000 s hg38.chr19_GL383574v1_alt 120021 2 + 155864 AA s panTro5.chr19 36187651 2 + 61309027 AA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931881 2 + 64411610 AA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343587 2 - 8369475 AA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940783 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255391 2 + 53671032 AA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709302 2 + 59248254 AA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581718 2 - 13342542 AA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506209 2 + 7714307 AA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311341 2 + 50890351 AA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941842 2 - 2385121 AA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384572 2 + 4274983 AA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596978 2 + 49145316 AA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5444709 2 + 8899380 AA i saiBol1.JH378197 I 1 C 0 s cebCap1.NW_016107633v1 1652873 2 - 2680843 AA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 399947 2 - 4471408 AC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 607361 2 + 2501019 AA i proCoq1.NW_012149263v1 I 357 C 0 s otoGar3.GL873654 5521490 2 + 5549422 AA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111135203 2 - 145441459 GA i mm10.chr7 C 0 C 0 s canFam3.chr1 4651119 2 - 122678785 GA i canFam3.chr1 C 0 C 0 e micMur3.chr22 3991400 182 - 30143674 I e dasNov3.JH563638 388034 0 + 643850 C a score=490043.000000 s hg38.chr19_GL383574v1_alt 120023 35 + 155864 AAAAA-ATCTGATTTTCTTACTAAAAATGA-TTTTGG s panTro5.chr19 36187653 34 + 61309027 AAAAA--TCTGATTTTCTTACTAAAAATGA-TTTTGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931883 34 + 64411610 AAAAA--TCTGATTTTCTTACTAAAAATGA-TTTTGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343589 34 - 8369475 AAAAA--TCTGATTTTCTTACTAAAAATGA-TTTTGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940785 36 - 106955855 AAAAAAATATGATTTTCTTACTAAAAATGA-TTTTGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255393 35 + 53671032 AGAAA-ATATAATTTTCTTACTAAAAATGA-TTTTGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709304 35 + 59248254 AGAAA-ATATAATTTTCTTACTAAAAATGA-TTTTGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581720 35 - 13342542 AGAAA-ATATAATTTTCTTACTAAAAATGA-TTTTGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506211 35 + 7714307 AGAAA-ATAGAATTTTCTTACTAAAAATGA-TTTTGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311343 35 + 50890351 AGAAA-ATATAATTTTCTTACTAAAAATGA-TTTTGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941844 35 - 2385121 AGAAA-ATAGAATTTTCTTACTAAAAATGA-TTTTGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384574 35 + 4274983 AGAAA-ATATAATTTTCTTACTAAAAATGA-TTTTGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28596980 34 + 49145316 AAAAA--TCTAATTTTCTTACTAAAAATTA-TTTTGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5444711 34 + 8899380 AAAAA--TCTAATTTTCTTACTAAAAATTA-TTTTGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1652875 34 - 2680843 AAAAA--TCTAATTTTCTTACTAAAAATTC-GTTTGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 399949 34 - 4471408 AAAAA--TCTAATTTTCTTACTAAAAATTA-TTTTGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3991582 35 - 30143674 AAAAA-GTCTAATATTCTTATTAACAATGA-TTTAGG i micMur3.chr22 I 182 C 0 s proCoq1.NW_012149263v1 607363 35 + 2501019 AAAAA-ATCTCATTTTCTTATTAAAAATGA-TTTGGG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5521492 34 + 5549422 --AAA-ATCTAATTTTCTTAATAAAAATGATTTTGAA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111135205 35 - 145441459 AAACA-GTCACATTTTCATACTCAGAATGA-CTTGGG i mm10.chr7 C 0 C 0 s canFam3.chr1 4651121 35 - 122678785 AAAAA-ATCTAATTTTCATTTTAGAAATAA-TTTTGG i canFam3.chr1 C 0 I 207 s dasNov3.JH563638 388034 35 + 643850 AAAAA-ACCCAATTTTCTTATTGAAAATGA-TGCTGG i dasNov3.JH563638 C 0 C 0 a score=650205.000000 s hg38.chr19_GL383574v1_alt 120058 42 + 155864 GATTAAGTACTAGTGAGATGCTAATTATGGCCAGGAAACCTG s panTro5.chr19 36187687 42 + 61309027 GATTAAGTACTAGTGAGATGCTAATTATGGCCAGGAAACCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931917 42 + 64411610 GATTAAGTACTAGTGAGATGCTAATTATGGCCAGGAAACCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343623 42 - 8369475 GATTAAGTACTAGTGAGATGCTAATTATGGCCAGGAAACCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940821 42 - 106955855 GATTAAGTACTAGTGAGATGCTAATTATGGCTAGAAAACCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255428 42 + 53671032 GATTAAGTACTAGCTAGATGCTAATTATGGCCAGGAAACCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709339 42 + 59248254 GATTAAGTACTAGCTAGATGCTAATTATGGCCAGGAAACCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581755 42 - 13342542 GATTAAGTACTAGCTAGATGCTAATTATGGCCAGGAAACCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506246 42 + 7714307 GATTAAGTACTAGCTAGATGCTAATTATGGCCAGGAAACCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311378 42 + 50890351 GATTAAGTACTAGCTAGATGCTAATTATGGCCAGGAAACCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941879 42 - 2385121 GATTAAGTACTAGCTAGATGCTAATTATGGCCAGGAAACCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384609 42 + 4274983 AATTAAGTACTAGCTAGATGCTAATTATGGCCAGGAAACCTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28597014 40 + 49145316 GATTAAGTACTAGTGACATGCTAATTATGGTCAGGAAACC-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5444745 42 + 8899380 GATTAAGTACTAGTGATATGCTAATTATGGTCAGTAAACCTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1652909 42 - 2680843 GATTAAGTACTAGTGACATGCTAATTATGGTCAGGAAACCTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 399983 42 - 4471408 GATTAAGTACTAGTGACATGCTAATTATGGTCAGGAAACCTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3991617 42 - 30143674 CATTAGGTACTAGTGAGATGGTAATTATGGCCTGGGAACCTG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 607398 42 + 2501019 CATTAGGTATTAGTGAGATGGTAATTATGGCCTGGGAACCTG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5521526 42 + 5549422 GATTAGGTACTAATTAGATGGTAATTATGGCCTAGGAACCTT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111135240 37 - 145441459 GGTTAGATACTAATGAGATTC-AGTTATGGTTAAAGAA---- i mm10.chr7 C 0 C 0 s canFam3.chr1 4651363 41 - 122678785 GATTAGTTTCTAGTGAGATGTTATTTATGAT-GGGGAACCTG i canFam3.chr1 I 207 C 0 s dasNov3.JH563638 388069 42 + 643850 GATTAGGTGCTATTAATATGGTAATTATGACCAGGGAACCCC i dasNov3.JH563638 C 0 C 0 a score=2493092.000000 s hg38.chr19_GL383574v1_alt 120100 193 + 155864 GAAATAACTCGCATCTTCCCTCACCCCACCCCC-GGTCCCCGAGGTGGATATATGTTCATGGGAACAGAGTT--TGGGGAAAGCTGGCTTGGCTCCCAGACTTGGGTGCCG-CAGGCTCTGGTGACCTAGGCAGGAAGAGGCGGAAGTGGTTCCTCTCACCAGC-CACAAGGACCTGTGC------TGCTCCTGGGTGTCAAGG s panTro5.chr19 36187729 193 + 61309027 GAAATAACTTGCGTCTTCCCTCACCCCACCCCC-GGTCCCCGAGGTGGATATATGTGCATGGGAACAGAGGT--TGGGGAAAGCTGGCTTGGCTCCCAGACTTGGGTGCCG-CAGGCTCTGGTGACCTAGGCAGGAAGAGGCGGAAGTGGTTCCTCTCACCAGC-CACAAGGACCTGTGC------GGCTCCTGGGTGTCAAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39931959 193 + 64411610 GAAATAACTTGCGTCTTCCCTCACCCCACCCCC-GGTCCCCGAGGTGGATATATGTGCATGGGAACAGAGGT--TGGGGAAAGCTGGCTTGGCTCCCAGACTTGGGTGCCG-CAGGCTCTGGTGACCTAGGCAGGAAGAGGCGGAAGTGGTTCCTCTCACCAGC-CACAAGGACCTGTGC------TGCTCCTGGGTGTCAAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343665 193 - 8369475 GAAATAACTTGCGTCTTCCCTCACCCTACCCCC-GGTCCCCGAGGTGGATGTATGTGCATGGGAACAGAGGT--TGGGGAAAGCTGGCTTGGCTCCCAGACTTGGGTGCCG-CAGGCTCTGGTGACCTAGGCAGGAAGAAGCGGAAGTGGTTCCTCTCACCAGC-CACAAGGACCTGTGC------TGCTCCTGGGTGTCAAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63940863 193 - 106955855 GAAAT-ACTTGCGTCTTCCCTCACCCCACCCCCAGGTCCCCGAGGTGGATGTATGTGCATGGGAACAGAGGC--TGGGGAAAGCTGGCTTGGCTCCCAGACTTGGGTGCCG-CAGGCTCTGGTGACCTAGGCAAGAAGAGGCGGAAGTGGTTCCTTTCACCAGC-CACAAGGACCTGTGC------TGCTCCTGGGTGTCAAGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255470 195 + 53671032 GAAAT-ACTTGCGTCTTCCCTCACCCCACCCCCAGGTCCCAGAGGTGGATGTGTGTGCATGGGAACAGAGGCGGGGGGGAAAGCTGGCTTGGTTCCCAGATTTGGGTGCCG-CAGGTTCTGGTGACCTAGGCAGGAAGAGGCGGAAGTGGTTCCTCTCACTAGC-CACAAGGACATGTGC------TGCTTCTGGGTGTCAAGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709381 193 + 59248254 GAAAT-ACTTGCGTCTTCCCTCACCCCACCCCCAGGTCCCAGAGGTGGATGTATGTGCATGGGAACAGAGGC--GGGGGAAAGCTGGCTTGGTTCCCAGATTTGGGTGCCG-CAGGTTCTGGTGACCTAGGCAGGAAGAGGCGGAAGTGGTTCCTCTCACTAGC-CACAAGGACATGTGC------TGCTTCTGGGTGTCAAGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581797 143 - 13342542 GAAAT-ACTTGCGTCTTCCCTCACCCCACCCCCAGGTCCCAGAGGTGGATGTATGTGCATGGGAACAGAGGC--GGGGGAAAGCTGGCTTGGTTCCCAGATTTGGG---------------------------------------------------AACTAGC-CACAAGGACATGTGC------TGCTTCTGGGTGTCAAGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506288 193 + 7714307 GAAAT-ACTTGCGTCTTCCCTCACCCCACCCCCAGGTCCCAGAGGTGGATGTATGTGCATGGGAACAGAGGC--TGGGGAAAGCTGGCTTGGTTCCCAGATTTGGGTGCCT-CAGGCTCTGGTGACCTAGGCAGGAAGAGGCGGAAGTGGTTCCTCTCACTAGC-CACAAGGACCTGTGC------TGCTTTTGGGTGTCAAGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311420 193 + 50890351 GAAAT-ACTTGCATCTTCCCTCACCCCACCCCCAGGTCCCAGAGGTGGATGTATGTGCATGGGAACAGAGGC--TGGGGAAAGCTGGCTTGGTTCCCAGATTTGGGTGCCG-CAGGCTCTGGTGACCTAGGCAGGAAGAGGCGGAAGTGGTTCCTCTCACTAGC-CACAAGGACCTGTGC------TGCTTCTGGGTGTCAAGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 941921 193 - 2385121 GAAAT-ACTTGCATCTTCCCTCACCCCACCCCCAGGTCCCAGAGGTGGATGTATGTGCATGGGAACAGAGGC--TGGGGAAAGCTGGCTTGGTTCCCAGATTTGGGTGCCT-CAGGCTCTGGTGACCTAGGCAGGAAGAGGCGGAAGTGGTTCCTCTCACTAGC-CACAAGGACCTGTGC------TGCTTTTGGGTGTCAAGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384651 193 + 4274983 GAAAT-ACTTGCGTCTTCCCTCACCCCACCGCCAGGTCCCAGAGGTGGATGTATGTGCATGGGAACAGAGGC--TGGGGAAAGCTGGCTTGGTTCCCAGATTTGGGTGCCA-CAGGCTCTGGTGACCTAGGCAGGAAGAGGCGAAAGTGGTTCCTCTCACTAGC-CACAAGGACCTGTGC------TGCTTCTGGGTGTCAAAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28597054 189 + 49145316 ---AT-AACTGCATCTTCCCTCATTCC-CCCCCAGGTCCCAGAGGTGGATGTATGTGCATGGGAACAGAGGC--TGGGGAAAGCTGGCTTGGCTCCCAGACTTGGGTGTCA-CAGGCTTTGGTGACCTAGGCTGGAAGAGGTGGAAGTGGTTCCTCTCATTAGC-CATAAGGACCTGCCC------TGCTCCTGGGTGTCAAGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5444787 192 + 8899380 GAAAT-ACTCGCGTCTTCTCTCACCCCACCCCCAGGTCCCAGAGGTGGATGTATGTGCATGGGAACAGGGAC--TGGGGAAAGCTGGCTTGGCTCCCAGACTTGGGTGCCC-CAGGCTTTCGTGACCTAGGCTGGAAGAGGCGGAAGTGGTTCCTCTCATTAG--TGTAAGGACCTGCAC------TGCTCCTGGGTGTCAAGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1652951 194 - 2680843 GAAAT-ACTTGCGTCTTCCCTCACCCCACCCCCAGGTCCCAGAGGTGGATGTATGTGCATGGGAACAGAGGC--TGGGGAAAGCTGGCTTGGCTCCCAGACTTGAGTGCCCGCAGGCTTTGGTGACCTAGGCTGGAAGAGGCAGAAGTGGTTCCTCTCATTAGC-CATAAGGACCTGCAC------TGCTCCTGGGTGTCAAGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 400025 193 - 4471408 GAAAT-ACTTGTGTCTTCCCTCACCCCACCCCCAGGTCCCAGATTTGGATGTATGTGCATGGGAACAGAGGC--TGGGGAAAGCTGGCTTGGCTCCCAGACTTGAATGCTG-CAGGCTTTGGTGACCTAGGCTGGAAGAGGCGGAAGTGGTTCCTCTCATTAGC-CATAAGGACCTGCGC------TGCTCCTGGGTGTCAAGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3991659 177 - 30143674 GGAAC-ACCTGAGTCTTCCCAGA-CCCACACCCAGGTCCCAGAAGTGGATGTATGCACATGGGAACAGAAGC--AGAGGAAAGCTGGCTTGGTTCCCAGACTTGGGTGCC-----------------TAAGCAGGGAGAGGCAAAAGTGGATCCTCTCACCCGCTTACAAGGGCCTATGC------AGCCCCTGGGTCTCAAAG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 607440 169 + 2501019 GGAAT-ACATGAGCCTTCCCAGA-CCCACCCCCAGGTCCCAGAAGTGGATGTATGCACACGGGAACAGAAGC--AGAGGCAAGTTGGCTTGGCTCCCAGACTTGGGTGCC-----------------TAGGGAGGGAGAGGCAAAAGTGGATCCTCTCACCAGCTCACAAGGG--------------GGCCCTGGGTCTCAAGG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5521568 178 + 5549422 GGAAT-ACCTGAGTCTTCCTGGACCCCATGCCCAGGTCCCAGAAGTGGATGTATGCCCATGAGAACAGAAGC--AAAGGAAAGCTGGTTTGTGCCATGGGCTTTGGTGACG----------------TAGGCTGAGAGAGGTGGAAGTGGTTCCTCTCACCAGCTCACAAGGACCTGTGC-------TGTCCTGGGTCTCAAGG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111135277 167 - 145441459 ------------GTCTTCCCTACCCCATCACCCTGCTCCCAGAGG--------------CAGGAAAAAAACC--T------AGCT--CCTGGCTCCCAGCCTTGGGAGCCC-TAGGCTTCGGTGATCTAGGAAAGGAGAGGTGAAGTTGGGCCCTCTCAGCAGCTTCCAAGGACTTGTGCTGCCCCTGCCCCTGAGTCTTCAGG i mm10.chr7 C 0 C 0 s canFam3.chr1 4651404 179 - 122678785 GGAAT-ACCTGACTTTTCTCCCACCCCACCCCCAGGTCCCAGAGGTGGAGGTGCATGCCTGAGAGCAGAGGC--AGAGGAAAGCTGGCCTGGCTCCCAGACTCCAGTGCTG-CAGGCTGTGGTAACCTAGGCAAG----------AGCTGTCCCTCTCCCCGGCTCCCAAAGACTTAGCC------TACCCCTGGGTCT----- i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 388111 0 + 643850 C a score=2437806.000000 s hg38.chr19_GL383574v1_alt 120293 158 + 155864 TGGGAGAGAATGC-GCTACATCCTTGTGCTTGAGTCACTTTGTAATGTACTTTGTAATTCCAGGTGATG----CC--CCTCCTCAACTGTGTCC-CTTCTGTTCCTGCCTTTGGCTTGGGGTTGAAAGAGGAGGG-AGTGGTGGGCACGGAAATGG-----G-AGGAGCCATG s panTro5.chr19 36187922 158 + 61309027 TGGGAGAGAATGC-GCTACATCCTTGTGCTTGAGTCACTTTGTAATGTAATTTGTAATTCGAGGTGATG----CC--CCTCCTCAACTGTGTTC-CTTCTGTTCTTGCCTCTGGCTTGGGGTTGAAAGAGGAGGG-AGTGGTGGGCACGGAAATGG-----G-AGGAGCCATG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39932152 158 + 64411610 TGGGAGAGAATGC-GCTACATCCTTGTGCTTGAGTCACTTTGTAATGTACTTTGTAATTCGAGGTGATG----CC--CCTCCTCAACTGTGTTC-CTTCTGTTCTTGCCTCTGGCTTGGGGTTGAAAGAGGAGGG-AGTGGTGGGCACGGAAATGG-----G-AGGAGCCATG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6343858 158 - 8369475 TGGGAGAGAATGC-GCTACATCCTTGTGCTTGAGTCACTTTGTAATGTACTTTGTAATTCGAGGTGATG----CC--CCTCCTCAACTGTGTCC-CTTCTGTTCTTGCCGCTGGCTTGGGGTTGAAAGAGGAGGG-AGTGGTGGGCACGGAAATGG-----G-AGGAGCCATG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63941056 158 - 106955855 AGGGAGAAAATGC-GCTATATCCTTGTGCTTGAGTCACTTTGTAATGTACTTTGTAATTCGAGGTGATG----CC--CCTGCTCAACTGTGTCC-CTTCTGTTCTTGCCTCTGGCTTGGGGTTGAAAGAGGAGGG-AGTGGTGGGCAGGGAAATGG-----G-AGGAGCCATG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255665 158 + 53671032 TGGGAGAGAATGC-ACTGCAACCTTGTGCTTGAGTCACTTTGTAATGTACTTTGTAATTCGAGGTGATG----CC--ACTCCTCAACTGTGTCC-CTTCTGTTCTTTCCTCTGGCTTGGGGTTGAAAGAGGAGGG-AGTGGTGGGCAGGGAAATGG-----G-AGGAGCCATG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709574 158 + 59248254 TGGGAGAGAATGC-ACTGCAACCTTGTGCTTGAGTCACTTTGTAATGTACTTTGTAATTCGAGGTGATG----CC--ACTCCTCAACTGTGTCC-CTTCTGTTCTTTCCTCTGGCTTGGGGTTGAAAGAGGAGGG-AGTGGTGGGCAGGGAAATGG-----G-AGGAGCCATG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4581940 158 - 13342542 TGGGAGAGAATGC-ACTGCAACCTTGTGCTTGAGTCACTTTGTAATGTACTTTGTAATTCGAGGTGATG----CC--ACTCCTCAACTGTGTCC-CTTCTGTTCTTTCCTCTGGCTTGGGGTTGAAAGAGGAGGG-AGTGGTGGGCAGGGAAATGG-----G-AGGAGCCATG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506481 158 + 7714307 TGGGAGAGAATGC-GCTGCAACCTTGTGCTTGAGTCACTTTGTAATGTACTTTGTAATTCGAGGTGATG----CC--CCTCCTCAACTGTGTCC-CTTCTGTTCTTTCCTCTGGCTTGGGGTTGAAAGAGGAGGG-AGTGGTGGGCAGGGAAATGG-----G-AGGAGCCATG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311613 158 + 50890351 TGGGAGAGAATGC-GCTGCAACCTTGTGCTTGAGTCACTTTGTAATGTACTTTGTAATTCGAGGTGATG----CC--CCTCCTCAACTGTGTCC-CTTCTGTTCTTTCCTCTGGCTTGGGGTTGAAAGAGGAGGG-AGTGGTGGGCAGGGAAATGG-----G-AGGAGCCATG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 942114 158 - 2385121 TGGGAGAGAATGC-GCTGCAACCTTGTGCTTGAGTCACTTTGTAATGTACTTTGTAATTCGAGGTGATG----CC--CCTCCTCAACTGTGTCC-CTTCTGTTCTTTCCTCTGGCTTGGGGCTGAAAGAGGAGGG-AGTGGTGGGCAGGGAAATGG-----G-AGGAGCCATG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2384844 158 + 4274983 TGGGAGAGAATGC-GCTGCAACCTTGTGCTTGAGTCACTTTGTAATGTACTTTGTAATTTGAGGTGATG----CC--CCTCCTCAGCTGTGTCC-CTTCTGTTCTTGCCTCTGGCTTGGGGTTGAAAGAGGAGGG-AGTGGTGGGCAGGGAAATGG-----G-AGGAGCCATG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28597243 158 + 49145316 TGGGAGAAAATGC-GCTACATCCTTGTGCTTGAGTCGCTGTGTTATGTACTTTGTAATTTGAGGTGATG----CC--TCTTCTCAGCTGTGTCC-CTTCTGTTTTTGCCTCTGGCTTGGGGCTGAAAGAGGAAGG-AGTGATGGGCAGGGAAATAG-----G-AGGAGCCATG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5444979 158 + 8899380 TGGGAGAAAATGC-GCTACATCCTTGTGCTTGAGTCACTGTGTCATGTACTTTATAATTCGAGGTGATG----CC--TATCCTCAGCTGTGTCC-CTTCTGTTTTTGCCTCTGGCTTGGGGCTGAAAGAGGAGGG-AGTGATGGGCAGGGAAGTGG-----G-AGGAGCCATG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1653145 158 - 2680843 TGGGAGAAAATGC-GCTACATCCTTGTGCTTGAGTCACTGTGTCATGTACTTTGTAATTTGAGGTGATG----CC--TATTCTCAGCTGTGTCC-CTTCTGTTTTTGCCTCTGGCTTGGGGCTGAAAGAGGAGGG-AGTGATGGGCAGGGAAATGG-----G-AGGAGCCATG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 400218 158 - 4471408 TGGGAGAAAATGC-GCTGCATCCTTGTGCTTGAGTCACAGTGTCATGTACTTTGTAATTTGAGGTGATG----CC--TCTCCTCAGCTGTGTCC-CTTCTGTTTTTGCCTCTGTCTTGGGGCAGAAAGAGGAGGG-AGTGATGGGCAGGGAAATGG-----G-AGGAGCCATG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3991836 156 - 30143674 GGGGAAAGAATGT-ACTACATCC-TGTGCTTAGATCACTCTGCCATGTACTTTGTAATTTGAGGTGAT-----CA--CTTCCTCAGCTATGTCC-ATTCTGTTCTTCCCTCTGGCTTGGGGCTAAAAGGGAAGGG-AATGGTGGGCAGGGAAATGG-----G-AGCAGCCATG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 607609 157 + 2501019 GGGGAAAGAATGT-ACTACATCCTTGTGCTTAAGTAACTTTGTCATGTACTTGGTGATTCGACGTGAT-----CC--CCTCCTCAGCTGCGTCC-ATTCTGTTCTTCCCTCTGGCTCGGGGCTAgaagggaaggg-aaaggtgggcagggaaATGG-----G-AGCAGCCATG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5521746 149 + 5549422 TGGAGGAGAGTGT-ACTGCATTCTTGTGCTTAAATAATTTTGTTACATACTTTGTAATTCAGGGTGAT-----TCTTCCTCCTTAGTTGTGTCC-ATTCTG---------------AGGGGCTGAAAGGAGAGGG-AATGGTGGGTGGGGAAATGGGAGGAG-AGGAGCCATG i otoGar3.GL873654 C 0 I 292 s mm10.chr7 111135444 147 - 145441459 GAGGGGAGGATGC-----------TGTGCTTAAGTAACTTTGTTCTGTGCTTTGTGA---AAGGTAATAGGGCCC--CTTCCTCAGCTGTGTCC-ACTA----CTTCCTTTTAGCTTGAGGCTGAAGTAGGAGGGCAGTGATGGACTGAGAAAAGG-----GAAAGAGCCATG i mm10.chr7 C 0 C 0 s canFam3.chr1 4651583 148 - 122678785 AGGTAGAGAATGCAGCCACATACCTGTGCTTCAGGAGCTTTG-----TACTTGACAACGCCAGGTGAT-----CC--CTTCCTGAGCCTAGTCC-TTGCCAGTCTT-----CAGTGTGGGGCTGAAAGAGGAGGG-AGTGGTGCGCAGGGAAATGG-----G-AGGAGCCCTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 388111 151 + 643850 TGGGAGAGAGACC---------CCTGTGGGTAAGTAATCTTGTAATGCACTTTGAAATGTGTAGTG-TG----CC--CTTCCTCAGCAGTGCCCATTTCTATTCTTTCTTCCAACTTGGGGCTGAGAGAAGAGGG-GGTGGTGGGCAGGGAAATGG-----GTAGGAGGCCTG i dasNov3.JH563638 C 0 C 0 a score=19110.000000 s hg38.chr19_GL383574v1_alt 120451 1 + 155864 A s panTro5.chr19 36188080 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39932310 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6344016 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63941214 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255823 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709732 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4582098 1 - 13342542 A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506639 1 + 7714307 A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311771 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 942272 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2385002 1 + 4274983 A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28597401 1 + 49145316 A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5445137 1 + 8899380 A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1653303 1 - 2680843 A i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 400376 1 - 4471408 A i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3991992 1 - 30143674 A i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 607766 1 + 2501019 A i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111135591 1 - 145441459 A i mm10.chr7 C 0 C 0 s canFam3.chr1 4651731 1 - 122678785 A i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 388262 1 + 643850 A i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5521895 292 + 5549422 I a score=1726045.000000 s hg38.chr19_GL383574v1_alt 120452 111 + 155864 CCTCTTTCCCCTCC--AG-CGCATAGGGCATTACTTCTTTTAGTTTGTTGCCTGGA--CTTGGGAGTTGGGCCCAGAGCTGCAGGAAGGTAAGTTTTATTTC-TGAAAGTTGTTTTA s panTro5.chr19 36188081 111 + 61309027 CCTCTTTCCCCTCC--AG-CGCATAGGGCATTACTTCTTTTAGTTTGTTGCCTGGA--CTTGGGAGTTGGGCCCAGAGCTGCAGGAAGGTAAGTTTTATTTC-TGAAAGTTGTTTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39932311 111 + 64411610 CCTCTTTCCCCTCC--AG-CGCATAGGGCATTACTTCTTTTAGTTTGTTGCCTGGA--CTTGGGAGTTGGGCCCAGAGCTGCAGGAAGGTAAGTTTTATTTC-TGAAAGTTGTTTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6344017 111 - 8369475 CCTCTTTCCCCTCC--AG-CGCATAGGGCATTACTTCTTTTAGTTTGTTGCCTGGA--CTTGGGAGTTGGGCCCAGAGCTGCAGGAAGGTAAGTTTTATTTC-TGAAAGTTGTTTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63941215 111 - 106955855 CCTCTTTCCCCTCC--AG-CGCATAGGGCATTACTTCTTTTAGTTTGTTGCCTGGA--CTTGGGAGTTGGGCCCAGAGCTGCAGGAAGGTAAGTTTTATTTC-TGAAAGTTGTTTTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255824 111 + 53671032 CCTCTTTCCCCTCC--AG-CGCACAGGGCACTACTTCTTTTAGTTTGTTGCCTGGA--CTTAGGAGTTGGGCCCGGAGCTGCAGGAAAGTAAGTTTTATTTC-TGAAAGTTGTTTTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709733 111 + 59248254 CCTCTTTCCCCTCC--AG-CGCACAGGGCACTACTTCTTTTAGTTTGTTGCCTGGA--CTTAGGAGTTGGGCCCGGAGCTGCAGGAAAGTAAGTTTTATTTC-TGAAAGTTGTTTTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4582099 111 - 13342542 CCTCTTTCCCCTCC--AG-CGCACAGGGCACTACTTCTTTTAGTTTGTTGCCTGGA--CTTAGGAGTTGGGCCCGGAGCTGCAGGAAAGTAAGTTTTATTTC-TGAAAGTTGTTTTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506640 111 + 7714307 CCTCTTTCCCCTCC--AG-CGCACAGGGCACTACTTCTTTTAGTTTGTTGCCTGGA--CTTAGGAGTTGGGCCCGGAGCTGCAGGAAAGTAAGTTTTATTTC-TGAAAGTTGTTTTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311772 111 + 50890351 CCTCTTTCCCCTCC--AG-CGCACAGGGCACTACTTCTTTTAGTTTGTTGCCTGGA--CTTAGGAGTTGGGCCCAGAGCTGCAAGAAAGTAAGTTTTATTTC-TGAAAGTTGTTTTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 942273 111 - 2385121 CCTCTTTCCCCTCC--AG-CGCACAGGGCACTACTTCTTTTAGTTTGTTGCCTGGA--CTTAGGAGTTGGGCCCGGAGCTGCAGGAAAGTAAGTTTTATTTC-TGAAAGTTGTTTTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2385003 111 + 4274983 CCTCTTTCCCCTCC--AG-CGCACAGGGCACTACTTCTTTTAGTTTGTTGCTTGGA--CTTAGGAGTTGGGCCCGGAGCTGCAGGAAGGTAAGTTTTATTTC-TGAAAGTTGTTTTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28597402 111 + 49145316 CTTCTTTTCCCTCC--AG-CACACAGGGCTTTACTTCTTTTAGCTTGTTGGTTGGA--CTTGGGAATTGGGGCCAGAGCTGCAGGAAGGTAAGTTTTATTTC-TGAAAGTTGTTTTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5445138 111 + 8899380 CTTCTTTCCCCTCC--AG-CACACAGGGCTTTACTTCTTTTAGTTTGTTGGTTGGA--CTTGGGAATTGGGGCCAGAGCTGCAGGAAGGTAAGTTTTATTTC-TGAAAGTTGTTTTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1653304 111 - 2680843 CTTCTTTCCCCTCC--AG-CACACAGGGCTTTACTTCTTTTAGTTTGTTGGTTGGA--CTTGGGAATTGGGGCCAGAGCTGCAGGAAGGTAAGTTTTATTTC-TGAAAGTTGTTTTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 400377 111 - 4471408 CTTCTTTCCCCTTC--CG-CACACAGGGCTTTACTTCTTTTAGTTTGTTGGTTGGA--CTTGGGAATTGGGGCCAGAGCTGCAGGAAGGTAAGTTTTATTTC-TGAAAGTTGTTTTA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3991993 111 - 30143674 CCTCCTTCCCCTTG--AG-TACACGGGACATCACTTCTTTTAG-TTGTTGCTTGGA-CTTTGGGAGTTGGGGCCAGAGCTACAGACAGGTCAGTGATATTTC-TGAAAGTTGTTAAA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 607767 112 + 2501019 CCTCCTTCCCCTCG--AG-TACACAGAGCGTCACTTCTTTTAGTTTGTTGCTTGGA-CTTTGGGAGTTGGGGCCAGAGCTGCAGACAGGTCAGTGATACTTC-TGAAAGTTTTTAAA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5522187 96 + 5549422 CCTACTTCCTCTTG--AG-CACACAAAATATCACTTCTTTTAG---------------TTTGGGAGTTGGGGCCAGAGCTACAGAAAGGTAAGTTATATTTCTTGAAAGTTGT---A i otoGar3.GL873654 I 292 C 0 s mm10.chr7 111135592 106 - 145441459 CCTCCTTTTCTTCT--GGACACACCAGGTGGCA---CATTTAGTTCGTTGACTGGATTTTTGGGAATTGGAGCCACAACTGCAGGAAGGTAGGTTCTATTTC-TA-----TGACTTA i mm10.chr7 C 0 C 0 s canFam3.chr1 4651732 114 - 122678785 CCTCCTTCCCCTCTGGAG-GATACCCGGCAGCCCTCCTTTTAGTTTGTTGCCAGGA-CCTTGAGAGTCAGGGCCAGAGCAGCAGGAAGGTAAGTAATAATTT-TGAAAAATTTTGTA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 388263 111 + 643850 ---CCTTCCCTTCTGGAA-GATGCAGAATAGCACTCCTTTTAGTTTGTTACCTGGA-CTTTGGAAGTCGGGGCCAGAGCTGCAGGAAGGTAAGTTATGTTTT-TGAAAGTTGGTGTA i dasNov3.JH563638 C 0 I 29 a score=155563.000000 s hg38.chr19_GL383574v1_alt 120563 19 + 155864 ACTT-ACAG-ATTTTGGGGGT s panTro5.chr19 36188192 19 + 61309027 ACTT-ACAG-ATTTTGGGGGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39932422 19 + 64411610 ACTT-ACAG-ATTTTGGGGGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6344128 19 - 8369475 ACTT-ACAG-ATTTTGGGGGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63941326 19 - 106955855 ACTT-ACAG-ATTTTGGGGGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255935 20 + 53671032 ACTTAATAG-ATTTTGGGGGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709844 20 + 59248254 ACTTAATAG-ATTTTGGGGGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4582210 20 - 13342542 ACTTAATAG-ATTTTGGGGGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506751 20 + 7714307 ACTTAATAG-ATTTTGGGGGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311883 20 + 50890351 ACTTAACAG-ATTTTGGGGGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 942384 20 - 2385121 ACTTAATAG-ATTTTGGGGGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2385114 19 + 4274983 ACTT-ACAG-ATTTTGGGGGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28597513 19 + 49145316 ACTC-TACG-ATTTTGGGGGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5445249 19 + 8899380 ACTC-TCTG-ATTTTGGGGGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1653415 19 - 2680843 ACTC-TATG-ATTTTGGGGGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 400488 19 - 4471408 ACTC-TACG-ATTTTGGGGGT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3992104 21 - 30143674 ACTATGCAGTATTTTGAGGGC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 607879 21 + 2501019 ACTGTGCAATATTTTGAGGGC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5522283 21 + 5549422 ACTATGCAGTATTTTGAAGGT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111135698 14 - 145441459 ACT-------GTAATGTGGGA i mm10.chr7 C 0 C 0 s canFam3.chr1 4651846 20 - 122678785 ACTATGTGGCATTTTGAGAG- i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 388374 29 + 643850 I a score=490937.000000 s hg38.chr19_GL383574v1_alt 120582 39 + 155864 TCGA---GGGAGTTTGTTTTC------------GACTAGTAGAAGACAAGAATT s panTro5.chr19 36188211 39 + 61309027 TCGA---GGGAGTTTGTTTTT------------GACTAGTAGAAGACAAGAATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39932441 39 + 64411610 TCGA---GGGAGTTTGTTTTC------------GACTAGTAGAAGACAAGAATT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6344147 39 - 8369475 TCGA---GGGAGTTTGTTTTC------------GACTAGTAGAAGACAAGAATT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63941345 39 - 106955855 TCGA---GGGAGTTTGTTTTT------------GACTAGTAGAAGACCAGAATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255955 39 + 53671032 TCGA---GGAAGTTTGTTTTC------------AACTAGTAGAAGACCAGAATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709864 39 + 59248254 TCGA---GGAAGTTTGTTTTC------------AACTAGTAGAAGACCAGAATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4582230 39 - 13342542 TCGA---GGAAGTTTGTTTTC------------AACTAGTAGAAGACCAGAATT i macNem1.NW_012011689v1 C 0 I 327 s cerAty1.NW_012005268v1 5506771 39 + 7714307 TCGA---GGAAGTTTGTTTTC------------AACTAGTAGAAGACCAGAATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311903 39 + 50890351 TCGA---GGAAGTTTGTTTTC------------AACTAGTAGAAGACCAGAATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 942404 39 - 2385121 TCGA---GGAAGTTTGTTTTC------------AACTAGTAGAAGACCAGAATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2385133 39 + 4274983 TCGA---GGAAGTTTGTTTTC------------AACTAGTAGAAGACCAGAATT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28597532 39 + 49145316 TCGA---GGGGGTTTGTTTTT------------GACTAGTAGAAGACCAGAATG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5445268 36 + 8899380 TCGA---GGGGGTTTGTTTTC------------GACTAGTAGACG---AGAATG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1653434 39 - 2680843 TTGA---GGGGGTTTGTTTTC------------GACTAGTAGAAGACCAGAATG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 400507 39 - 4471408 TCGA---GGGGGTTTGTTTTC------------GACTAGTAGAAGACCAAAATG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3992125 42 - 30143674 TGGAGGGGGGAGTTTGTTTCT------------GGCCAGTAGTAGACCAGAATG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 607900 41 + 2501019 TGGA-GGGGGAGTTTGTTTTT------------GACCAGTAGTAGACCAGAATG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5522304 41 + 5549422 TGGA-GGGGGGTTTTGAGTTT------------GACTAATAGCAGGCCAGAATG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111135712 31 - 145441459 TTGG---AGTGGATTGATC--------------------TAGTGGACCAGAATG i mm10.chr7 C 0 C 0 s canFam3.chr1 4651866 49 - 122678785 --GA---AAAGTTTGGGTTTCCCCCCACACACACACTAATAGGAGGCTAGTGTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 388403 38 + 643850 CCAA---ACACATTTGTTTT-------------GACTAGTAATAGGCGACAATG i dasNov3.JH563638 I 29 C 0 a score=165970.000000 s hg38.chr19_GL383574v1_alt 120621 9 + 155864 AAGAATTGC s panTro5.chr19 36188250 9 + 61309027 AAGAATTGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39932480 9 + 64411610 AAGAATTGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6344186 8 - 8369475 -AGAATTGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63941384 9 - 106955855 AAGAATTGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30255994 9 + 53671032 AAGAATTGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709903 9 + 59248254 AAGAATTGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4582596 9 - 13342542 aaGAATTGC i macNem1.NW_012011689v1 I 327 C 0 s cerAty1.NW_012005268v1 5506810 9 + 7714307 AAGAATTGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311942 9 + 50890351 AAGAATTGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 942443 9 - 2385121 AAGAATTGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2385172 9 + 4274983 AAGAATTGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28597571 9 + 49145316 AAGATTTGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5445304 9 + 8899380 AAGAATTGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1653473 9 - 2680843 AAGAATTGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 400546 9 - 4471408 AAGAATTGC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3992167 9 - 30143674 AGGAATTGC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 607941 9 + 2501019 AGGAATTGC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5522345 9 + 5549422 AAGAATTGC i otoGar3.GL873654 C 0 I 597 s mm10.chr7 111135743 9 - 145441459 AGGAGTTGC i mm10.chr7 C 0 C 0 s canFam3.chr1 4651915 9 - 122678785 AAGTATTTC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 388441 9 + 643850 AAGAATTTC i dasNov3.JH563638 C 0 C 0 a score=4001032.000000 s hg38.chr19_GL383574v1_alt 120630 296 + 155864 AGTG-GAAGATGAAATGCTATCTTCTTACTAATCCACGCCCTCTTTCAGAGCAGTAGCTTTCA----TTTACGGAGACTGAGGGTATGGCAGAGGCTGTGCTTTATGGATTTAATCCTCAGCA--GT-----------actg---------aggcacaagagtt-----------aggcgacttgct--------caaagttagtaagtgccatttatt--cagctgatatttactaagagcaggaattcacatctagatcagtctgattcccatacccgtac-cagtaactactGCATTTTGGAAGTGCGTCGTTTCCATGAA-GTTTCTTTGTAT--TGGAGCATC s panTro5.chr19 36188259 285 + 61309027 AGTG-GAAGATGAAATGCTATCTTCTTACTAATCCACGCCCTCTTTCAGAGCAGTAGCTTTCA----TTTACGGAGACTGAGGGTATGGCAGAGGCTGTGCTTTATGGATTTAATCCTCAgca---------------------------------caagagtt-----------aggcgacttgct--------caaagttagtaagtgccatttatt--cagctgatatttactaagagcaggaattcacatctagatcagtctgattcccatacccatac-cagtaactactGCATTTTGGAAGTGCGTGGTTTCCATGAA-GTTTCTTTGTAT--TGGAGCATC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39932489 285 + 64411610 AGTG-GAAGATGAAATGCTATCTTCTTACTAATCCACGCCCTCTTTCAGAGCAGTAGCTTTCA----TTTACGGAGACTGAGGGTATGGCAGAGGCTGTGCTTTATGGATTTAATCCTCAgca---------------------------------caagagtt-----------aggcgacttgct--------caaagttagtaagtgccatttatt--cagctgatatttactaagagcaggaattcacatctagatcagtctgattcccatacccatac-cagtaactactGCATTTTGGAAGTGCGTGGTTTCCATGAA-GTTTCTTTGTAT--TGGAGCATC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6344194 296 - 8369475 AGTG-GAAGATGAAATGCTATCTTCTTACTAATCCACACCCTCTTTCAGAGCAGTAGCTTTCA----TTTACGGAGACTGAGGGTATGGCAGAGGCTGTGCTTTATGGATTTAATCCTCAGCA--GT-----------actg---------aggcacaagagtt-----------aggcgacttgct--------caaagttagtaagtgccatttatt--cagctgatatttactaagagcaggaattcacatctagatcagtctgattcccatacccatac-cagtaactactGCATTTTGGAAGTGCGTGGTTTCCATGAA-GTTTCTTTGTAT--TGGAGCATC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63941393 296 - 106955855 AGTG-GAAGATGAAATGCTACCCTCTTACTAATCCACGGCCTCTTTCAGAGCAGTAGCTTTCA----TTTACAGAGACTGAGGGTATGGCAGAGGCTGTGCTTTATGGATTTAATCCTCAGCA--GT-----------actg---------aggcacaagagtt-----------aggtgacttgct--------caaagttagtaagtgccatttatt--cagctgatgtttactaagagcaggaattcacatctagatctgtctgattcccatacccatac-CAGTAACTACTGCATTTTGGAAGTGCGTGGTTTCCATGAA-GTTTCTTTGTAC--TGGAGCATC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30256003 296 + 53671032 AGTG-GAAGATGAAATGCTACCCTCTTACTAGTCCAGGGCCTCTTTCAGAGCAGTAGCTTTCA----TTTATGTAGACTGAGGGTATGGCGGAGGCTGTGCTTTATGGATGTAATCTTCAGCA--GT-----------actg---------aggcacaagagtt-----------aggcgacttgct--------caaagttagtaagtgccatttatt--cagctgatatttactaagagcaggaattcacatctagatcagtctgattcccatacccatac-ccgtaactactGCATTTTGGAAGTGTGGGGTTTCTATGAA-GTTTCTTTGTAT--TGGAGCATC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34709912 296 + 59248254 AGTG-GAAGATGAAATGCTACCCTCTTACTAGTCCAGGGCCTCTTTCAGAGCAGTAGCTTTCA----TTTATGTAGACTGAGGGTATGGCGGAGGCTGTGCTTTATGGATGTAATCTTCAGCA--GT-----------actg---------aggcacaagagtt-----------aggcgacttgct--------caaagttagtaagtgccatttatt--cagctgatatttactaagagcaggaattcacatctagatcagtctgattcccatacccatac-ccgtaactactGCATTTTGGAAGTGTGGGGTTTCTATGAA-GTTTCTTTGTAT--TGGAGCATC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4582605 296 - 13342542 AGTG-GAAGATGAAATGCTACCCTCTTACTAGTCCAGGGCCTCTTTCAGAGCAGTAGCTTTCA----TTTATGTAGACTGAGGGTATGGCGGAGGCTGTGCTTTATGGATGTAATCTTCAGCA--GT-----------actg---------aggcacaagagtt-----------aggcgacttgct--------caaagttagtaagtgccatttatt--cagccgatatttactaagagcaggaattcacatctagatcagtctgattcccatacccatac-tcgtaactactGCATTTTGGAAGTGTGGGGTTTCTATGAA-GTTTCTTTGTAT--TGGAGCATC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5506819 296 + 7714307 AGTG-GAAGATGAAATGCTACCCTCTTACTAGTCCAGGACCTCTTTCAGAGCAGTAGCTTTCA----TTTATGTAGACTGAGGGTATGGCGGAGGCTGTGCTTTATGGATGTAATCTTCAGCA--GT-----------actg---------aggcacaagagtt-----------aggcgacttgct--------caaagttagtaagtgccatttatt--cagctgatatttactaagagcaggaattcacatctagatcagtctgattcccatacccatac-ccgtaactactGCATTTTGGAAGTGTGGGGTTTCCATGAA-GTTTCTTTGTAT--TGGAGCATC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29311951 296 + 50890351 AGTG-GAAGATGAAATGCTACCCTCTTACTAGTCCAGGGCCTCTTTCAGAGCAGTAGCTTTCA----TTTATGTAGACTGAGGGTATGGCAGAGGCTGTGCTTTTTGGATGTAATATTCAGCA--GT-----------actg---------aggcacaagagtt-----------aggcgacttgct--------caaagttagtaagtgccatttatt--cagctgatatttactaagagcaggaattcacatctagatcagtctgattcccatacccatac-ccgtaactactGCATTTTGGAAGTGTGGGGTTTCCATGAA-GTTTCTTTGTAT--TGGAGCATC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 942452 296 - 2385121 AGTG-GAAGATGAAATGCTACCCTCTTACTAGTCCAGGGCCTCTTTCAGAGCAGTAGCTTTCA----TTTATGTAGACTGAGGGTATGGCGGAGGCTGTGCTTTATGGATGTAATCTTCAGCA--GT-----------actg---------aggcacaagagtt-----------aggcgacttgct--------caaagttagtaagtgccatttatt--cagctgatatttactaagagcaggaattcacatctagatcagtctgattcccatacccatac-ccgtaactactGCATTTTGAAAGTGTGGGGTTTCCATGAA-GTTTCTTTGTAT--TGGAGCATC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2385181 296 + 4274983 AGTG-GAAGATGAAATGCTACCTTCTTACTAGTCCAGGGCCTCTTTCAGAACAGTAGCTTTCA----TTTATGTAGACTGAGGGTATGGCGGAGGCTGTGCTTTATGGATTTAATCTTCAGCA--GT-----------actg---------aggcacaagagtt-----------aggcgacttgct--------caaagttagtaagtgctatttatt--cagctgatatttactaagagcaggaattcacatctagatcagtctgattcccatacccatac-ccgtaactactGCATTGTGGAAGTGTGTGGTTTCCATGAA-GTTTCTTTGTAT--TGGAGCATC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28597580 294 + 49145316 AATG-GAA-ATGAAATGCTACCTTCTTACCAGTCCATGGACTCTTTCAGAGCTGTAGCTTTTA-----TTACGGAGACTGAGGGTATGGCAGTGGCTGTGCTTTATGGATTTAATCGTCAGCA--GT-----------ACTG---------AGGCAGAAGAGTT-----------GGGCCACTTGCT--------TAAAGTTAGTAAGTGCCATCTATT--CAGCTGATATTTACTAAGAGCAGGAATTGACATGTAGATCAGTCTGATTCCCATACCGATAC-CAATAACTACTGCATTTTGGAAATGCATGGTTTCTGTGAA-GTTTCTTTGTGT--TGAAGCATC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5445313 294 + 8899380 AATG-GAA-ATGAAATGCTACCTTATTACCAGTCCACGGACTCTTTCAGAGCAGTAGCTTTTA-----TTATGGAGACTGAGGGTATGGCAGAGGCTGTGCTTTATGGATTTAATCGTCAGCA--GT-----------ACTG---------ATGCAGAAGAGTT-----------GGGCCACTTGCT--------TAAAGTTAGTAAGTGCTGTCTATT--CAGCTGATACTTACTAAGAGCAGGAATTCACATGTAGATTAGTCTGATTCCCATACCCATAC-CAATAACGACTGCATTTTGGAAGTGCATGGTTTCCATGAA-GTTTCTTTGTAT--TGAAGCATC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1653482 293 - 2680843 AATG-GAA-ATGAAATGCTACCTTCTTACCAGTCCACAGACTCTTTCAGAGCAGTAGCTTTTA-----TTATGGAGACTGAGGGTATGGCAGAGGCTGTGCTTTATGGATTT-ATCGTCAGCA--GT-----------actg---------aggcagaagagtt-----------gggccacttgct--------taaagttagtaagtgccatctatt--cagctgatatttactaagagcaggaattcacatgtagatcagtctgattcccatacccatac-CAATAACTACTGCATTTTGGAAGTGCATGGTTTCCATGAA-GTTTCTTTGTAT--TGAAGCACC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 400555 294 - 4471408 AATG-GAA-ATGAAATGCTACCTTCTTACCAGTCCACGGACTCTTTCAGAGCAGTAGCTTTTA-----TTACGGAGACTGAGGGTATGGCAGAGGCTGTGCTTTATGGATTTAATCGTCAGCA--GT-----------ACTG---------AGGCAGAAAAGTT-----------GGGCCACTTGCT--------TAAAGTTAGTAAGTGCCATCTATT--TAGCTGATACTTACTAAGAGCAGGAATTCACATGTAGATCAGTCTGATTCCCATACCTATAA-CAATAACTACTGCATTTTGGAAGTGCCTGGTTTCCATGAA-GTTTCTTTGTAT--TGAAGCATC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3992176 300 - 30143674 ATTCTTAAGATAAAATGCTACCCTCTGACTAGTCCGTGGCCTCTTTTAGAGCAGTGGCTTCCA----TTTATTGAGGCTCA------------AGCTGTGCTTTATGGATTTAATCTTCACCATAGT-----------ACtgaagaaactgacgcgcaagagttc----------aggtgccttgcttaaggtcatagagtcagtaagtgccaTTCATT--CAGCTGATATTTACTAAGAGCAGGCATTCACCTCTAGGTCGGTCTGATTTCCTTACCCTTAC-CAATGACT-----ATTTTGGCAGTGCCTGGTTTCCATGAT-GTTTCTTTGTAT--TGGAGCATC i micMur3.chr22 C 0 I 437 s proCoq1.NW_012149263v1 607950 279 + 2501019 AGTCTTAAGATAAAATGCTACCCTCTGACTAGTCCATGGCCTCTTTTAGAGCAGTGGCTTCCA----TTTATTGAGGCTCA------------AGCTGTGC-TCATTGATTTAATCCTCACCATAGT-----------ACTGAAGAAACTGAGGCACAAGAGTTC----------AGAT----------------CATAGTCAGTAAGTGCCATTCATT--CAGCTGA----TACTAAGAGCAGACATTCACCTCTAGGTCAGTCTGATTTCCTTACCCTTAC-CAGCGTCT-----ACTTTGGCAGTGCCTGCTTTCCATGAT-GTTTCTTTGTAT--TGGAGCATC i proCoq1.NW_012149263v1 C 0 I 1 s otoGar3.GL873654 5522951 288 + 5549422 AGTC-TAAGGTAAAATGCTACCGTCTGACTAGTACACGGTCTCTTTTAGAGCAGTAGCTCACA------TATTAAGACTTA------------AGCTGTGCTTTATGAATTT----CTTGCCACGGT-----------ACtgaagaaacccaggcat-agagttc----------aggtgtcttgcttaaggtc-cagagttagtaagtgCTATTCATT--CCGCTGA--CTTACTAAGAGCAGGAATTTACATCTAGGTCATTTGGATTCCCAGATTTATGT-CAGTAAGT-----ATTTTGACAATGCCGGGTTT-CATAAT-ATTTATTTGTAT--TGGAGCACA i otoGar3.GL873654 I 597 I 1 s mm10.chr7 111135752 304 - 145441459 ------------CAAAGATACCTAA--GCTAGTCCAAGGCTTCTTGAAGAGTGGCTGTTTCCA----TTTCCTGAGTCTGGAGATGTGCCAAGTCCCATGCTCTGTAGagtttagccactcca--ttctactaaggaaactg---------acgcacaagttttc----------agctgacttgtttaaggtcacagagtcactaagtgCCTTTCACT--TTGCTGATAATTACCGAGAGCAGAAATTCACGTCTAGATGAATAGGACTGCCCAAGCAAAATGCAATAGCCACTGCATT-TGGCAGGACCTGCCTTCCATGAAGGTTTTTTTGTAT--TGGAACATC i mm10.chr7 C 0 C 0 s canFam3.chr1 4651924 308 - 122678785 GTTA-GAAGATGAAATGCTTCTCTCTGACTAGTGTCCAGCCTCTTTCAGAGCAGATAACTCCAGTTTCTTAGTGAGACTCAAAGTGTGCCAAGGGCTGTGGTTTATGGATTTAAGCCTCACCACTGT-----------ACTGAAGAAACCGAGGCAC-AGAGTTCAaagaaacagaggcg---------------tagagttagtaagtgccattaatt--taactggtaattactgagaactggaattcctatccaggtcaatctgattccca-------ag-ccgtacctactgcacTTTGTCAGTGCCTG-TTCCCAGGAA-ATCTCTGTGGACTGTGGAGCATC i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 388450 266 + 643850 AGTA-GAAGA--------TATTCTCTT-----------GCCTCTTTCAGAGCAGCAGCTTCCA----TTCACTGAGATTCAGTGTTTGTCAAGCGCTGCATTTTATGGATTTAATCCTTACCACGGT-----------ATtgaataaac--aggcacaagagatg----------cagtaacttgcctgacgtcctagactgtgtaagtgccaTTTTTTTCCTGCTAACATTTACTGagagtaggaattcaaatctaggttagtccaactcccaaacccatgT-CAGCTCCT-------------------------------G-CTCTCTTTATAT--TGAAGGATC i dasNov3.JH563638 C 0 I 1 a score=3572236.000000 s hg38.chr19_GL383574v1_alt 120926 290 + 155864 TACCTGAAAGGCAAGGGCCTGAGCattttc-tcctttt-----------cccttattaac-ggt-aagctccttgagagcaagcattatgtctgtctc-ttcaccactgcatcctgggttcctggagcagtgctatgcacttaggagaaccttagtgaatgtttgAGTATGTGAAGGCTCATGGCGCAGATAAGTGGCAGAG-CC-AGAAGCCAGCCTGGAGGTGAACCACT--GCG----GGCCTGCTCTCTGGGGCTGTCTTCCCTGCCTAGCGA--------GTGGATGGTGAGGAATCACCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TTT s panTro5.chr19 36188544 290 + 61309027 TACCTGAAAGGCAAGGGCCTGAGCattttc-tcctttt-----------cccttattaac-ggt-aagctccttgagagcaagcattatgtctatctc-ttcaccactgcatcctgggttcttggagcagtgctatgctcttaggagaaccttagtgaatgtttgAGTATGTGAAGGCTCATGGCGCAGATAAGTGGCAGAG-CC-AGAAGCCAGCCTGGAGGTGAACCACT--GCG----GGCCTGCTCTCTGGGGCTGTCTTCCCTGCCTAGCGA--------GTGGATGGTGAGGAATCACCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39932774 290 + 64411610 TACCTGAAAGGCAAGGGCCTGAGCattttc-tcctttt-----------cccttattaac-ggt-aagctccttgagagcaagcattatgtctatctc-ttcaccactgcatcctgggttcttggagcagtgctatgcacttaggagaaccttagtgaatgtttgAGTATGTGAAGGCTCATGGCGCAGATAAGTGGCAGAG-CC-AGAAGCCAGCCTGGAGGTGAACCACT--GCG----GGCCTGCTCTCTGGGGCTGTCTTCCCTGCCTAGCGA--------GTGGCTGGTGAGGAATCACCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6344490 290 - 8369475 TACCTGAAAGGCAAGGGCCTGAGCattttc-tcctttt-----------cccttattaac-ggt-aagctccttgagagcaagcattatgtctgtctc-ttcaccactgcatcctgggttcctggagcagtgctatgcacttaggagaaccttagtgaatgtttgAGTATGTGAAGGCTCATGGCGCAGATAAGTGGCAGAG-CC-AGAAGCCAGCCTGGAGGTGAACCACT--GCG----GGCCTGCTCTCTGGGGCTGTCTTCCCTGCCTAGCGA--------GTGGATGGTGAGGAATCACCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63941689 272 - 106955855 TACCTGAAAGGCAAGGACCTGAGCattttc-tcctttt-----------cccttattaac-ggt-aagctccttgagagcaagcattatgtctgtctc-ttcaccact------------------gcagtgctatgcacttaggagaaccttggtgaacgtttgAGTATGTGAAGGCTCATGGCGCAGATAAGTGGCAGAG-CC-AGAAGCCAGCCTGGAGGTGAACCACT--GCG----GGCCTGCTCTCTGGGGCTGTCTTCCCTGCCTAGCGA--------GTGGATGGTGAGGAATCACCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30256299 285 + 53671032 TACCTGAAAGGCGAG-----GAGCattttc-tcctttt-----------cccttattaac-agt-aagctccttgagagcaagcattatgtctgtctc-ttcactactgcatcctggatgctgggagcagtgctatgcacttagtagaaccttggtgaacatttgAGTATGTGAAGGCTTATGGCGCAGATAAGTGGCAGAG-TT-GGAAGCCAGCCAGGAGGTGAACCATT--GCG----GGCCTGCTCCCTGGGGCTGTCTTCCCTGCCTAGCGA--------GTGGATGGTGAGGAATCACCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34710208 285 + 59248254 TACCTGAAAGGCGAG-----GAGCattttc-tcctttt-----------cccttattaac-agt-aagctccttgagagcaagcattatgtctgtctc-ttcactactgcatcctggatgctgggagcagtgctatgcacttagtagaaccttggtgaacgtttgAGTATGTGAAGGCTTATGGCGCAGATAAGTGGCAGAG-TT-GGAAGCCAGCCAGGAGGTGAACCATT--GCG----GGCCTGCTCTCTGGGGCTGTCTTCCCTGCCTAGCGA--------GTGGATGGTGAGGAATCACCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4582901 285 - 13342542 TACCTGAAAGGCGAG-----GAGCATTTTC-TCCtttt-----------cccttattaac-agt-aagctccttgagagcaagcattatgtctgtctc-ttcactactgcatcctggatgctgggagcagtgctatgcacttagtagaaccttggtgaacgtttgAGTATGTGAAGGCTTATGGCGCAGATAAGTGGCAGAG-TT-GGAAGCCAGCCAGGAGGTGAACCATT--GCG----GGCCTGCTCTCTGGGGCTGTCTTCCCTGCCTAGCGA--------GTGGATGGTGAGGAATCATCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5507115 284 + 7714307 TACCTGAAAGGCGAG-----GAGCattttc-tcctttt------------ccttattaac-ggt-aagctccttgagagcaagcattatgtctgtctc-ttcactactgcatcctggatgctgggagcagtgctatgcacttagtagaaccttggtgaacgtttgAGTATGTGAAGGCTTATGGCGCAGATAAGTGGCAGAG-TT-GGAAGCCAGCCAGGAGGTGAACCATT--GCG----GGCCTGCTCTCTGGGGCTGTCTTCCCTGCCTAGCGA--------GTGGATGGTGAGGAATCACCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29312247 285 + 50890351 TACCTGAAAGGCGAG-----GAGCattttc-tcctttt-----------cccttattaac-agt-aagctccttgagagcaagcattatgtctgtctc-ttcactactgcatcctggatgctgggagcagtactatgcacttggtagaaccttggtgaacgtttgAGTATGTGAAGGCTTATGGCGCAGATAAGTGGCAGAG-TT-GGAAGCCAGCCAGGAGGTGAACCATT--GTG----GGCCTGCTCTCTGGGGCTGTCTTCCCTGCCCGGCGA--------GTGGATGGTGAGGAATCACCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 942748 285 - 2385121 TACCTGAAAGGCGAG-----GAGCATTTTC-TCCtttt-----------cccttattaac-ggt-aagctccttgagagcaagcattatgtctgtctc-ttcactactgcatcctggatgctgggagcagtgctatgcacttagtagaaccttggtgaacgtttgAGTATGTGAAGGCTTATGGCGCAGATAAGTGGCAGAG-TT-GGAAGCCAGCCAGGAGGTGAACCATT--GCG----GGCCTGCTCTCTGGGGCTGTCTTCCCTGCCTAGCGA--------GTGGATGGTGAGGAATCACCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2385477 285 + 4274983 TACCTGAAAGGCGAG-----GAGCattttc-tcctttt-----------cccttattaat-ggt-aagctccttgagagcaagcattatgtctgtctc-ttcactactgcatcctggatgctgggagcagtgctatgcacttagtagaaccttggtgaacgtttgAGTATGTGAAGGCTTATGGCGCAGATAAGTGGCAGAG-CT-GGAAGCCAGCCAGGAGGTGAACCATT--GCG----GGCCTGCTCTCTGGGGCTGTCTTCCCTGCCTAGCGA--------GTGGATGGTGAGGAATCACCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28597874 285 + 49145316 TACGTGAAAGGTGAGGG-CTGAgctttttc-tcttttt-----------tcccccattac--gt-aagcgccttgagagcaggtatt--gtctgtcct-ttcaccgctgcatcctggatgcctggagcagtgctatgctcttagtagaaccttggtgaacgtttgAA-TTGTGAAGGCTCATGGCACAAATAAGTGGCAAAG-CT-GGAAGCCAGCTTGGAGGTGAACCACT--GTG----GGCCTGCTCTCTGGGGCTGTTTTTCCTGCTTAGGGA--------GTGGATGGTTAGGAATCACCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5445607 291 + 8899380 TACCTGAAAGGTGAGAGCCTGAGCTTTTTCTtcttttt-----------acccctattac-agt-aagctccttgagagcaggtattaagtctgtctt-ttcacggctgcatcctgaatgcctggagcagtgctgtgcacttagtagaaccttggtgaacatttgAGTTTGTGAAGGCTCATGGCACAAATAAACGGCAGAG-CT-GGAAGCCAGCTTGGAGGTGAACTGCT--GTG----GGCCTGCTCTCTGGGGCTGTCTTTCCTGCTTAGGGA--------GTGGATGGTTAGGAATCACCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1653775 289 - 2680843 TACCTGAAAGGTGAGAGCCTGAgctttttc-tcctttt-----------ccccctattac-gtt-aagctccttgagagcaggtattaagtctgtctt-ttcactgctgcatcctgaattcctggagcagtgctatgcacttagtagaaccttggtgaaagtttgAGTATGTGAAAGCTCATGGCACAAATAAGTGGCAGAG-CC--GAAGCCAGCTTGGAGGTGAACTGTT--GTG----GGCCTGCTCTCTGGGGCTGTCTTTCCTGCTTAGGGA--------GTGGATGGTTAGGAATCACCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 400849 291 - 4471408 TACCTGAAAGGTGAGGGCCTGAGCTTTTTCTCcttttt-----------ccccctattac-ggt-aagctccttaagagcaggtattaagtctgtctt-ttcaccgttgcatcctggatgcctggagcagtgctatgcacttactagaaccttggtgaatgtttAAGTATGTGAAGGCTTATGGCACAAATAAGTGGCAGAG-CT-GGAAGCCAGCTTGGAGGTGAACCACT--GTG----GGCCTGCTCTCTGGGGCTGTCTTTCCTGCTTAGGGA--------GTGGATGGTTAGGAATCACCTAGAATTTTCTCA---------------------------------------------------------------------------------------------TTT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 608230 275 + 2501019 TACATAAAAAGTAAGGGC----------tt-ttttttt-----------ccctattagac-cat-aagctccttgagagcagttattgtgtctgtctc-t---tcactgcatccttagtgcttggaggagtgcagtgcgcatagtaggacctcggtgaatgtctgGGTACGTGAAGGCTCGTGGCATAGATAAGTGGCCGAG-CT-AGAAGCCAACATGGAGGTGAATTGCT--GCA----GGCCTGCTCTCT-GGGCTGCCTTCCCTGCC-AAGGG--------GTGGGTGGTGGGAAGGCACCTAGAATTTCCTCA---------------------------------------------------------------------------------------------TTT i proCoq1.NW_012149263v1 I 1 C 0 s otoGar3.GL873654 5523240 364 + 5549422 AATGTGAAAGGTAAGGGA----------TT-T------------------cctattagac-tat-aagctccttgagaacaggtattgtgtctgtctc-ttcatcactgcattccctatggttggagcagtgcagtgtacatagtaggacctccatgaatgtttgAGTATGTCAAGGCTCATGGTCTAGATAAGTGGCAGAG-GG-GGAAGCCAACCTGGAAGTGAACTACTCCGAA----AGCCTCCCCTCTGGGGCTGCCTTCCCT----CGGGA--------GTGGGTGGTGAGGAAGCACCTGGAATTTCCTCATTTCTCAGTGTTGAACCTGCTGAGGCATTTGTGGGGAAGAATGGGCTCCCTAGCGGTGACTCTGACTTGCTGGAAGCACCTGGAATTTCCTCATTT i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111136056 216 - 145441459 -----------------------------------TTT-----------CACCTAGCAGCAGGT-AAGGGCCTTTCTAGCC--CATTAAACTAGGCAG-T--ACTTCTGTATCCCTGATGTCTGGAGAAGGGCTGTACATACATTTGGACTTCAGTAA----TTGAGTATGTGAAGGCTCATGGTTTGGGAGAGTAGCAGAG-TA-GGAAGCTAGC------------------ATA----AGCC-----------------TTTCCTGCCTAGGGA--------GCCCATGTGAGGAGATGTCATAGAATTTCTACA---------------------------------------------------------------------------------------------TTT i mm10.chr7 C 0 I 162 s canFam3.chr1 4652233 297 - 122678785 TACTGACAAGGTCAAGGCATGAGTTttttc-tcacatt------------------gggt-tat-aagctcctggagagcaggaattgtgtctgtttcactcacccctgtacccccagtgcctggagcagtgtcgtgcacatagtaggacctcagtaaatGCCTGAGTATGTGAAGGCTCATGGCGTGAGGAAGTGGGAGAGCCT-GGAAGTCAGGATGGTAGTAAGCTCTG--ATGGTAAGGCCTGCTCTGTAGGGCCGTCTTCCCTGCCTGGGGAACAAGGGTGGGAATGGGGAGGAGGCTGCTTCAATATTCTCA---------------------------------------------------------------------------------------------CTT i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 388717 297 + 643850 TACCTGAAAGGTAAAGACATGAGCGTTTTC-TCCTATTTCTCCCATATctcccattagac-tgtaaagctccttgagagcaggtgctatgtctgtctcattcacttttgtatcctcagctcttatagcaatgcttggcacatagtaggtactcaataaatgtttgAATATGTGGTGGC--GTGGCTTAGGTAAGTAGCAGAA-CTCAGAAGCCAGCCTGGTGGTGAACCCCT--GCA----GGCCTGCTCTTAGGGGCCACC-TCCCTGCCTACAGT--------GCAGAC----AGGAGACTCCTGTAATTTCCTCC---------------------------------------------------------------------------------------------TTT i dasNov3.JH563638 I 1 C 0 e micMur3.chr22 3992476 437 - 30143674 I a score=813051.000000 s hg38.chr19_GL383574v1_alt 121216 57 + 155864 CTTAATGTTTGACCTGATGAAATATT----GGGA-AGAATGAGCTTCCTGGCTGTGACTCTG s panTro5.chr19 36188834 57 + 61309027 CTTAATGTTTGACCTGCTGAAATATC----GGGA-AGAATGAGCTTCCTGGCTGTGACTCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933064 57 + 64411610 CTTAATGTTTGACCTGCTGAAATATT----GGGA-AGAATGAGCTTCCTGGCTGTGACTCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6344780 57 - 8369475 CTTAATGTTTGACCTGCTGAAATATT----GGGA-AGAATGAGCTTCCTGGCTGTGACTCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63941961 61 - 106955855 CTTAATGTTTGACCTGCTGAAATATTTCTAGGGA-AGAATGGGCTTCCTGGCTGTGACTCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30256584 61 + 53671032 TTTAATGTTTGACCTGCTGAAATATTTCTAGGGA-AGAATGGGCTCCCTGGCTGTGACTCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34710493 61 + 59248254 TTTAATGTTTGACCTGCTGAAATATTTCTAGGGA-AGAATGGGCTCCCTGGCTGTGACTCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583186 61 - 13342542 TTTAATGTTTGACCTGCTGAAATATTTCTAGGGA-AGAATGGGCTCCCTGGCTGTGACTCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5507399 61 + 7714307 TTTAATGTTTGACCTGCTGAAATATTTCTAGGGA-AGAATGGGCTCCCTGGCTGTGACTCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29312532 61 + 50890351 TTTCATGTTTGACCTGCTGAAATATTTCTAGGGA-AGAATGGACTCACTGGCTGTGACTCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943033 61 - 2385121 TTTAATGTTTGACCTGCTGAAATATTTCTAGGGA-AGAATGGGCTCCCTGGCTGTGACTCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2385762 61 + 4274983 TTTAATGTTTGACCTGCTGAAATATTTCTAGGGA-AGAATGGGCTCCCTGGCTGTGACTCTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598159 61 + 49145316 CTTAACGTTTGACCTGCTGAAATGTTTGTAGGGA-AGAATGAGCTTCCTGACTGTGACTCTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5445898 61 + 8899380 CTTAACGTTTGACCTGCTGAAATGTTTGTAGGGA-AGAATGGACTTCCTCGCTGTGACTCTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654064 61 - 2680843 CTTAACGTTTGACCTGATGAAATGTTTGTAGGGA-AGAATGGGCTTCCTGGCTGTGACTCTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401140 61 - 4471408 CTTAACGTTTGATCTGCTGAAATGTTTGTAGGGA-AGAATGAGCTTCCTGGCTGTGACTCTG i aotNan1.NW_018505377v1 C 0 I 1 s proCoq1.NW_012149263v1 608505 61 + 2501019 CTCAGTGTTGAACCTGCTGAAACATTTATGGGGA-AGAATGCGTTCCCTAGCTGTGACTCTG i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5523604 61 + 5549422 CTCAGTGTTGAACCTGCTGAGGCATTTGTGGGGA-AGAATGGGCTCCCTAGCGGTGACTCTG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4652530 59 - 122678785 --AAATATTCGACCTGCTGGGGTGTTTGTGGGGA-AAAATGGGCAACCTCACCTTGACTCTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389014 62 + 643850 CTAAATGTCTGACATGCTGTAATGTTTCTGGGGAGAGAGTGGTTGCTCTGGCTGTGACTTTG i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3992476 437 - 30143674 I e mm10.chr7 111136272 162 - 145441459 I a score=10920.000000 s hg38.chr19_GL383574v1_alt 121273 1 + 155864 A s panTro5.chr19 36188891 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933121 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6344837 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942022 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30256645 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34710554 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583247 1 - 13342542 A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5507460 1 + 7714307 A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29312593 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943094 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2385823 1 + 4274983 A i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 608566 1 + 2501019 A i proCoq1.NW_012149263v1 C 0 I 439 s otoGar3.GL873654 5523665 1 + 5549422 A i otoGar3.GL873654 C 0 I 65 s canFam3.chr1 4652589 1 - 122678785 A i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389076 1 + 643850 A i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3992476 437 - 30143674 I e mm10.chr7 111136272 162 - 145441459 I e aotNan1.NW_018505377v1 401201 1 - 4471408 I e cebCap1.NW_016107633v1 1654125 0 - 2680843 C e saiBol1.JH378197 5445959 0 + 8899380 C e calJac3.chr22 28598220 0 + 49145316 C a score=23794.000000 s hg38.chr19_GL383574v1_alt 121274 3 + 155864 ttt s panTro5.chr19 36188892 3 + 61309027 ttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933122 3 + 64411610 ttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6344838 3 - 8369475 ttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942023 3 - 106955855 ttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30256646 3 + 53671032 TTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34710555 3 + 59248254 TTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583248 3 - 13342542 TTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5507461 3 + 7714307 TTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29312594 3 + 50890351 TTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943095 3 - 2385121 TTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2385824 3 + 4274983 ttt i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5523731 3 + 5549422 TCT i otoGar3.GL873654 I 65 C 0 s canFam3.chr1 4652590 3 - 122678785 CTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389077 3 + 643850 CTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 608567 439 + 2501019 I e micMur3.chr22 3992476 437 - 30143674 I e mm10.chr7 111136272 162 - 145441459 I e aotNan1.NW_018505377v1 401201 1 - 4471408 I e cebCap1.NW_016107633v1 1654125 0 - 2680843 C e saiBol1.JH378197 5445959 0 + 8899380 C e calJac3.chr22 28598220 0 + 49145316 C a score=26383.000000 s hg38.chr19_GL383574v1_alt 121277 5 + 155864 t-----------ctgt s panTro5.chr19 36188895 5 + 61309027 t-----------ctgt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933125 5 + 64411610 t-----------ctgt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6344841 5 - 8369475 t-----------ctgt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942026 5 - 106955855 t-----------ctgt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30256649 5 + 53671032 T-----------CCGt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34710558 5 + 59248254 T-----------CTGt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583251 5 - 13342542 T-----------CTGt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5507464 5 + 7714307 T-----------CCGt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29312597 5 + 50890351 T-----------CTGt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943098 5 - 2385121 T-----------CTGt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2385827 5 + 4274983 t-----------ctgt i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5523734 16 + 5549422 TAGAGGATAGAGCTGC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4652593 5 - 122678785 G-----------CTGT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 608567 439 + 2501019 I e micMur3.chr22 3992476 437 - 30143674 I e dasNov3.JH563638 389080 0 + 643850 C e mm10.chr7 111136272 162 - 145441459 I e aotNan1.NW_018505377v1 401201 1 - 4471408 I e cebCap1.NW_016107633v1 1654125 0 - 2680843 C e saiBol1.JH378197 5445959 0 + 8899380 C e calJac3.chr22 28598220 0 + 49145316 C a score=565097.000000 s hg38.chr19_GL383574v1_alt 121282 98 + 155864 tgtttttttt---------------------gagac--aggagtctcgctttgtcacccaggctgaagtgcagtggcgcaatctcggctcactgcaacctctatctccggggttcaagcga s panTro5.chr19 36188900 102 + 61309027 tgtttttttt-------------------ttgagactaaggagtctcgctttgtcacccaggctgaagtgcagtggcgcgatcttggctcactgcaacctctgcctccggggttcaagcga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933130 101 + 64411610 tgtttttttt--------------------tgagactaaggagtctcgctttgtcacccaggctgaagtgcagtggcgcgatcttggctcactgcaacctctgcctccggggttcaagcga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6344846 100 - 8369475 tgtttttttt---------------------gagactgaggagtctcgctttgtcacccaggctgaagtgcagcggcgcgatctcggctcactgcaacctctgcctccgaggttcaagcga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942031 109 - 106955855 tgtgtttttttt------------tttttttgaggctgaggagtctcgctctgtcacccaggctggagtgcagtggcgcgatctcgactcactgcaacctctgcctccggggttcaagcga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30256654 116 + 53671032 ttttatttttta-----atttttatttttttgagacagaggagtctcgctctgtcgcccaggctggagtgcagtggcatgatctcggctcactgcaacctctgcctcctgggttcaagcga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34710563 116 + 59248254 ttttatttttta-----atttttatttttttgagacagaggagtctcgctctgttgcccaggctggagtgcagtggcatgatctcggctcactgcaacctctgcctcctgggttcaagcga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583256 116 - 13342542 ttttatttttta-----atttttatttttttgagacagaggagtctcgctctgtcgcccaggctggagtgcagtggcatgatctcggctcactgcaacctctgcctcctgggttcaagcga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5507469 116 + 7714307 ttttatttttta-----atttttatttttttgagacagaggagtctcgctctgtcgcccaggctggagtgcagtggcatgatctcggctcactgcaacctctgcctcctgggttcaagtga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29312602 116 + 50890351 ttttatttttta-----atttttatttttttgagacagaggagtctcgctctgtcacccaggctggagtgcagtggcatgatctcggctcactgcaacctctgcctcctgggttcaagcga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943103 116 - 2385121 ttttatttttta-----atttttatttttttgagacagaggagtctcgctctgtcgcccaggctggagtgcagtggcatgatctcggctcactgcaacctctgcctcctgggttcaagtga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2385832 109 + 4274983 ttttat------------ttttaatttttttgagacaggggagtctcgctctgtcgcccaggctggagtgcagtggcataatcttggctcactgcaacctctgcctcctgggttcaagcga i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5523750 115 + 5549422 TATAATTATTGATAATTAtttttttttggtagagaca---gagtctcactttatcaccctcggtcgagtgccatggc---atcatagctcacagcaacctccaacttctgggcctaggcaa i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 608567 439 + 2501019 I e micMur3.chr22 3992476 437 - 30143674 I e dasNov3.JH563638 389080 0 + 643850 C e mm10.chr7 111136272 162 - 145441459 I e canFam3.chr1 4652598 0 - 122678785 C e aotNan1.NW_018505377v1 401201 1 - 4471408 I e cebCap1.NW_016107633v1 1654125 0 - 2680843 C e saiBol1.JH378197 5445959 0 + 8899380 C e calJac3.chr22 28598220 0 + 49145316 C a score=579103.000000 s hg38.chr19_GL383574v1_alt 121380 96 + 155864 ttcccctgcctcagcctcctgagtagctgggactgtaggcgcatgccaccatgcccagctaatgtttgtatttttagtagagatggggtttcacca s panTro5.chr19 36189002 96 + 61309027 ttctcctgcctcagcctcctgagtagctgggactgtaggcgcgtgccaccacgcccagctaatgtttgtatttttagtagagatggggtttcacca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933231 96 + 64411610 ttctcctgcctcagcctcctgagtagctgggactgtaggcgcgtgccaccacgcccagctaatgtttgtatttttagtagagatggggtttcacca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6344946 96 - 8369475 ttctcctgcctcagcctcctgagtagctgggactgtaggcgcgtgccaccatgcccagctaatgtttgtatttttagtagagatggggtttcacca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942140 96 - 106955855 ttctcctggctcagcctcctgagtagctgggactgtaggcgtgcgccaccacgcccagctaatgtttgcatttttagtagagatggggtttcaccg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30256770 96 + 53671032 ttctcctgcctcaggctcctgagtagctgggactacaggcgcccgccaccacacccagctaatttttgtatttttagtagagatggggtttcgcca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34710679 96 + 59248254 ttctcctgcctcaggctcctgagtagctgggactacaggcgcccgccaccacacccagctaatttttgtatttttagtagagatggggtttcgcca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583372 96 - 13342542 ttctcctgcctcaggctcctgagtagctgggactacaggcgcccgccaccacacccagctaatttttgtatttttagtagagatggggtttcgcca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5507585 96 + 7714307 ttcttctgcctcagcctcctgagtagctgggactacaggcacccgccaccacacccagctaatttttgtatttttagtagagatggggtttcacca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29312718 96 + 50890351 ttctcctgcctcagcctcctgagtacctgggactacaggcgcctgccaccacacccagctaatttttatatttttagtagagatggggtttcacca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943219 96 - 2385121 ttctcctgcctcagcctcctgagtagctgggactacaggcgcccgccaccacacccagctaatttttgtatttttagtagagatggggtttcatca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2385941 96 + 4274983 ttctcctgcctcagcctcctgagtagctgggactacaggcgcacgccaccacacccagctaatttttgtatttttagtagaggtggggtttcacca i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5523865 86 + 5549422 ttctcctgcctcagccttccaagtagctgggactacaggtgcctgccacaatacccagctatt-------tttttgttgcagattgg---ccacca i otoGar3.GL873654 C 0 T 286 s mm10.chr7 111136434 34 - 145441459 tccctctccctc--tctcctgagtttCTG-------------------------------ATTGTTT----------------------------- i mm10.chr7 I 162 C 0 e proCoq1.NW_012149263v1 608567 439 + 2501019 I e micMur3.chr22 3992476 437 - 30143674 I e dasNov3.JH563638 389080 0 + 643850 C e canFam3.chr1 4652598 0 - 122678785 C e aotNan1.NW_018505377v1 401201 1 - 4471408 I e cebCap1.NW_016107633v1 1654125 0 - 2680843 C e saiBol1.JH378197 5445959 0 + 8899380 C e calJac3.chr22 28598220 0 + 49145316 C a score=62183.000000 s hg38.chr19_GL383574v1_alt 121476 10 + 155864 tgttggccag s panTro5.chr19 36189098 10 + 61309027 tgttggccag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933327 10 + 64411610 tgttggccag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345042 10 - 8369475 tgttggccag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942236 10 - 106955855 tattggccag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30256866 10 + 53671032 tgttggccag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34710775 10 + 59248254 tgttggccag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583468 10 - 13342542 tgttggccag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5507681 10 + 7714307 tgttggccag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29312814 10 + 50890351 tgttggccag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943315 10 - 2385121 tgttggccag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386037 10 + 4274983 tgttggccag i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 608567 439 + 2501019 I e micMur3.chr22 3992476 437 - 30143674 I e dasNov3.JH563638 389080 0 + 643850 C e otoGar3.GL873654 5523951 286 + 5549422 T e mm10.chr7 111136468 0 - 145441459 C e canFam3.chr1 4652598 0 - 122678785 C e aotNan1.NW_018505377v1 401201 1 - 4471408 I e cebCap1.NW_016107633v1 1654125 0 - 2680843 C e saiBol1.JH378197 5445959 0 + 8899380 C e calJac3.chr22 28598220 0 + 49145316 C a score=380350.000000 s hg38.chr19_GL383574v1_alt 121486 71 + 155864 gatggtcttgatctcttcacctcggcctcccaaagtgct-----ggaattacaggtgtgagccattgcatcaggcA s panTro5.chr19 36189108 71 + 61309027 gatggtctcgatctcttcacctcggcctcccaaagtgct-----ggaattacaggtgtgagccattgcaccaggcA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933337 71 + 64411610 gatggtctcgatctcttcacctcggcctcccaaagtgct-----ggaattacaggtgtgagccattacaccaggcA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345052 71 - 8369475 gatggtctcgatctcttcacctcggcctcccaaagtgct-----ggaattacaggtgtgagccattgcaccaggcA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942246 71 - 106955855 gatggtctcgatctcttcacctcagccttccaaagtgct-----ggaattacaggtgtgagccattgcaccaggTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30256876 71 + 53671032 gatggtctcgatctcttgacctcggcctcccaaagtgct-----ggaattacaggtgtgagccattgcgccaggcG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34710785 71 + 59248254 gatggtctcgatctcttgacctcggcctcccaaagtgct-----ggaattacaggtgtgagccattgtgccaggcG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583478 71 - 13342542 gatggtctcgatctcttgacctcggcctcccaaagtgct-----ggaattacaggtgtgagccattgcgccaggcG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5507691 71 + 7714307 gatggtcttgatctcttgacctcggcctcccaaagtgct-----ggaattacaggtgtgagccattgcgccaggcG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29312824 71 + 50890351 gatggtcttgatctcttgacctcggcctcccaaagtgct-----ggaattacaagtgtgagccattgcgccaggcG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943325 71 - 2385121 gatggtcttgatctcttgacctcggcctcccaaagtgct-----ggaattacaggtgtgagccattgcgccaggcG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386047 71 + 4274983 gatggtctcgatctcttgacctcggcatcccaaagtgct-----ggaattacaggtgtgagccattgcgccaggTG i colAng1.NW_012111697v1 C 0 C 0 s mm10.chr7 111136468 50 - 145441459 -----------------------GACCTGCTGAAATGTTTATGGGGAAAAACAGGTTCCTAACTTTGTTTCTG--- i mm10.chr7 C 0 C 0 s dasNov3.JH563638 389080 7 + 643850 GATGGTC--------------------------------------------------------------------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 608567 439 + 2501019 I e micMur3.chr22 3992476 437 - 30143674 I e otoGar3.GL873654 5523951 286 + 5549422 T e canFam3.chr1 4652598 0 - 122678785 C e aotNan1.NW_018505377v1 401201 1 - 4471408 I e cebCap1.NW_016107633v1 1654125 0 - 2680843 C e saiBol1.JH378197 5445959 0 + 8899380 C e calJac3.chr22 28598220 0 + 49145316 C a score=12376.000000 s hg38.chr19_GL383574v1_alt 121557 1 + 155864 A s panTro5.chr19 36189179 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933408 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345123 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942317 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30256947 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34710856 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583549 1 - 13342542 A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5507762 1 + 7714307 A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29312895 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943396 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386118 1 + 4274983 A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598220 1 + 49145316 A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5445959 1 + 8899380 A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654125 1 - 2680843 A i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5523665 1 + 5549422 A i otoGar3.GL873654 T 286 C 0 s mm10.chr7 111136518 1 - 145441459 A i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 608567 439 + 2501019 I e micMur3.chr22 3992476 437 - 30143674 I e dasNov3.JH563638 389087 0 + 643850 C e canFam3.chr1 4652598 0 - 122678785 C e aotNan1.NW_018505377v1 401201 1 - 4471408 I a score=100065.000000 s hg38.chr19_GL383574v1_alt 121558 8 + 155864 CTTTCTGG s panTro5.chr19 36189180 8 + 61309027 CTTTCTGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933409 8 + 64411610 CTTTCTGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345124 8 - 8369475 CTTTCTGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942318 8 - 106955855 CTTTCTGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30256948 8 + 53671032 CTTTCTAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34710857 8 + 59248254 CTTTCTAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583550 8 - 13342542 CTTTCTAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5507763 8 + 7714307 CTTTCTAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29312896 8 + 50890351 CTTTCTAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943397 8 - 2385121 CTTTCTAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386119 8 + 4274983 CTTTCTAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598221 8 + 49145316 CTTTCTGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5445960 8 + 8899380 CTTTCTGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654126 8 - 2680843 CTTTCTGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401202 8 - 4471408 CTTTCTGG i aotNan1.NW_018505377v1 I 1 C 0 s otoGar3.GL873654 5523666 8 + 5549422 CTTGCTGG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111136519 8 - 145441459 CTTGCTGG i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 608567 439 + 2501019 I e micMur3.chr22 3992476 437 - 30143674 I e dasNov3.JH563638 389087 0 + 643850 C e canFam3.chr1 4652598 0 - 122678785 C a score=1062876.000000 s hg38.chr19_GL383574v1_alt 121566 83 + 155864 TCTTTTTGAGGGATGGGAAGGTTTGCTGGGTATGCAAAAT-TGGAGTCAGTGTTCT----CAGCTTGGA-----AGAGATGTTATA---ATT---TATT s panTro5.chr19 36189188 83 + 61309027 TCTTTTTGAGGGATGGGAAGGTTTGCTGGGTATGCAAAAT-TGGAGTCAGTGTTCT----CAGCTTGGA-----AGAGATGTTACA---ATT---TATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933417 83 + 64411610 TCTTTTTGAGGGATGGGAAGGTTTGCTGGGTATGCAAAAT-TGGAGTCAGTGTTCT----CAGCTTGGA-----AGAGATGTTACA---ATT---TATT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345132 83 - 8369475 TCTTTTTGAGGGATGGGAAGGTTTGCTGGGTATGCAAAAT-TGGAGTCAGTGTTCT----CAGCTTGGA-----AGAGATGTTATA---ATT---TATT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942326 83 - 106955855 TCTTTTTGAGGGATGGGAAGGTTTGCTGGGTTTGCAAAAT-TGGAGTCAGTGTTCT----CAGCTTGGA-----AGAGATGTTATA---ATT---TATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30256956 83 + 53671032 TCTTTTTGAGGGATGGGAAGGTTTGCTGGGTATGCAGAAT-TGGAGTCAGTGTTCT----CAGCTTGGA-----AGAGATGTTACA---ATT---TAGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34710865 83 + 59248254 TCTTTTTGAGGGATGGGAAGGTTTGCTGGGTATGCAGAAT-TGGAGTCAGTGTTCT----CAGCTTGGA-----AGAGATGTTACA---ATT---TAGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583558 83 - 13342542 TCTTTTTGAGGGATGGGAAGTTTTGCTGGGTATGCAGAAT-TGGAGTCAGTGTTCT----CAGCTTGGA-----AGAGATGTTACA---ATT---TAGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5507771 83 + 7714307 TCTTTTTGAGGGATGGGAAGGTTTGCTGGGTATGCAGAAT-TGGAGTCAGTGTTCT----CAGCTTGGA-----AGAGATGTTACA---ATT---TAGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29312904 83 + 50890351 TCTTTTTGAGGGATGGGAAGGTTTGCTGGGTATGCAGAAT-TGGAGTCAGTGTTCT----CAGCTTGGA-----AGAGTTGTTACA---ATT---TAGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943405 83 - 2385121 TCTTTTTGAGGGATGGGAAGGTTTGCTGGGTATGCAGAAT-TGGAGTCAGTGTTCT----CAGCTTGGA-----AGAGATGTTACA---ATT---TAGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386127 83 + 4274983 TCTTTTAGAGGGATGGGAAGGTTTGCTGGGTATGCAAAAT-TGGAGTCAGTGTTCT----CAGCTTGGA-----AGAGATGTTACA---ATT---TATT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598229 82 + 49145316 TCTTTTTGAGGGTTGGGAAAGTTTGCTGGATATGCAAAAT-TGGAGTCAGTGTTCT----CAGCTTGGA-----AGAGATATTAT----ATG---TATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5445968 82 + 8899380 TCTTTTTGAGGGATGGGAAAGTTTGCCGGATATGCGAAAT-TGGAGTCAATGTTCT----CAGCTTGGA-----AGAGATGTTAT----ATT---TATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654134 82 - 2680843 TCTTTTTGAGGGATGGGAAAGTTTGCCGGATATGCAAAAT-TGGAGTCAGTGTTCT----CAGCTTGGA-----AGAGATGTTAT----ATT---TATT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401210 80 - 4471408 TCTTTTTGAGGGATGGGAAA--CTGCCGGATATGCAAAAT-TGGGGTCAGTGTTCT----CAGCTTGGA-----AGAGATGTTAT----ATT---TATT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5523674 86 + 5549422 CCTGTTTGAGGGTTGAGAAGGCTTGCTGGGTACACGAGAT-TGAAGTCAGTGTACC----CATCTTAGA-GGATAGAGCTGCTAT----AAT---TATT i otoGar3.GL873654 C 0 I 250 s mm10.chr7 111136527 90 - 145441459 TCTTCTTAACAGATGATAGGGCTTGCAGGGGATATAAACT-TAGAGTTAGTGTGCC----CAACTAGGA-GAAGAGAGATACCATAATTATC---CATT i mm10.chr7 C 0 I 3 s canFam3.chr1 4652598 90 - 122678785 TCTTTCTGAGAGATGGGAAGGCTTGCTGGCTGTGCAGAAT-TGAAGTGTGTGTTCC----CAGCCTGGA-GGCAGGGGCTGCTGTA---ATTATACATT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389087 91 + 643850 -----TTAAGGGATGGGAAGGCTTGCTGGATGTGCAAAATCCAGTGTCACTGTTCTTTCCCAGCTTGGAAAGGGAGAGCTGCTAAAATTATC---CACT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 608567 439 + 2501019 I e micMur3.chr22 3992476 437 - 30143674 I a score=61523.000000 s hg38.chr19_GL383574v1_alt 121649 5 + 155864 GATAG s panTro5.chr19 36189271 5 + 61309027 GATAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933500 5 + 64411610 GATAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345215 5 - 8369475 GATAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942409 5 - 106955855 GATAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257039 5 + 53671032 GATAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34710948 5 + 59248254 GATAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583641 5 - 13342542 GATAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5507854 5 + 7714307 GATAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29312987 5 + 50890351 GATAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943488 5 - 2385121 GATAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386210 5 + 4274983 GATAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598311 5 + 49145316 GATAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5446050 5 + 8899380 GATAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654216 5 - 2680843 GATAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401290 5 - 4471408 GATAA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5524010 5 + 5549422 GATAA i otoGar3.GL873654 I 250 C 0 s mm10.chr7 111136620 2 - 145441459 GA--- i mm10.chr7 I 3 C 0 s canFam3.chr1 4652688 5 - 122678785 GATCA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389178 5 + 643850 GATAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 608567 439 + 2501019 I e micMur3.chr22 3992476 437 - 30143674 I a score=415330.000000 s hg38.chr19_GL383574v1_alt 121654 27 + 155864 AATTTTTTATGGATGCCTTAAATTCTC s panTro5.chr19 36189276 27 + 61309027 AATTTTTTATGGATGCCTTAAATTCTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933505 27 + 64411610 AATTTTTTATGGATGCCTTAAATTCTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345220 27 - 8369475 AATTTTTTATGGATGCCTTAAATTCTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942414 27 - 106955855 AATTTTTTATGGATGCCTTAAATTCTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257044 27 + 53671032 CATTTTTTATGGATGCCTTAAATTCTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34710953 27 + 59248254 CATTTTTTATGGATGCCTTAAATTCTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583646 27 - 13342542 CATTTTTTATGGATGCCTTAAATTCTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5507859 27 + 7714307 AATTTTTTATGGATGCCTTAAATTCTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29312992 27 + 50890351 AATTTTTTATGGATGCCTTAAATTCTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943493 27 - 2385121 AATTTTTTATGGATGCCTTAAATTCTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386215 27 + 4274983 AATTTTTAATGGATGCCTTAAATTCTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598316 27 + 49145316 AATTTTTTACAGATTCCTTAAATTCGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5446055 27 + 8899380 AATTTTTTACAGATGCCTTAAATTCGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654221 27 - 2680843 AATTTTTTACAGATGCCTTAAATTCGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401295 27 - 4471408 AATTTTTTACAGATGCCTTAAATTCAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3992913 27 - 30143674 AATTTATTATGGGTACCTTACATTTCC i micMur3.chr22 I 437 C 0 s proCoq1.NW_012149263v1 609006 27 + 2501019 AATTTTTTATGAGTACCTTACATTTTC i proCoq1.NW_012149263v1 I 439 C 0 s otoGar3.GL873654 5524015 27 + 5549422 AAATTATTATGGATTCTTTACATTTTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111136622 27 - 145441459 AATTGTTCCTGGGTGCCTTAAATGTTC i mm10.chr7 C 0 I 347 s canFam3.chr1 4652693 27 - 122678785 GATTTTTCAAGGGTGCCTTAAATTTTC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389183 27 + 643850 AAATTTTCATGGATGATTTAAATGTTC i dasNov3.JH563638 C 0 C 0 a score=1892376.000000 s hg38.chr19_GL383574v1_alt 121681 140 + 155864 AGAAATGATTTTGAATCTTAAG----TTTATCTAAAATT----TATATAATCCTTCTCCATAGTGAG-AAAAAAATTTCTAAATTATAGTTCGATTTACCTATT----TA-----TATATAAGCTTCTGGATAAATACTTG-TTTTTTTTTCCTCCATT s panTro5.chr19 36189303 139 + 61309027 AGAAATGATTTTGAATCTTAAG----TTTATCTAAAATT----TATATAATCCTTCTCCATAGTGAG-AAAAAAATTTCTAAATTATAGTTAGATTTACCTATT----TA-----TATATAAGCTTCTGGATAAATACTTG-TTTTTTTC-CCTCCATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933532 139 + 64411610 AGAAATGATTTTGAATCTTAAG----TTTATCTAAAATT----TATATAATCCTTCTCCATAGTGAG-AAAAAAATTTCTAAATTATAGTTAGATTTACCTATT----TA-----TATATAAGCTTCTGGATAAATACTTG-TTTTTTTC-CCTCCATT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345247 139 - 8369475 AGAAATGATTTTGAATCTTAAG----TTTATCTAAAATT----TATATAATCCTTCTCCATAGTGAG-AAAAAAATTTCTAAATTATAGTTCGATTTACCTATT----TA-----TATATAAGCTTCTGGATAAATACTTG-TTTTTTTT-CCTCCATT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942441 136 - 106955855 AGAAATGATCTTGAATCTTAAA----TTTATCTAAAATT----TATATAATCCCTCTCCATAGTGAGAAAAAAAATTTCTAAATTATAGTTTGATTTACCTATT----TA-----TATATAAGCTTCTGG----ATACTTG-TTTTATTT-TCCCCATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257071 145 + 53671032 AGAAACGGTCTTGAATCTTAAG----TTTATCTAAAATTTATATATATAATCCCTCTCCATAGTAAGAAAAAAAATTTCTAAATTATAGTTTGATTTATCTGTT----AA-----TATATAAGCTTCTGGATAAATACTTGTTTTTTTTT-TACCCATG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34710980 145 + 59248254 AGAAACGGTCTTGAATCTTAAG----TTTATCTAAAATTTATATATATAATCCCTCTCCATAGTAAGAAAAAAAATTTCTAAATTATAGTTTGATTTATCTGTT----AA-----TATATAAGCTTCTGGATAAATACTTGTTTTTTTTT-TACCCATG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583673 144 - 13342542 AGAAATGGTCTTGAATCTTAAG----TTTATCTAAAATTTATATATATAATCCCTCTCCATAGTAAGAAAAAAAATTTCTAAATTATAGTTTGATTTATCTGTT----AA-----TATATAAGCTTCTGGATAAATACTTG-TTTTTTTT-TACCCATG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5507886 141 + 7714307 AGAAATGGTCTTGAATCTTAAG----TTTATCTAAAATT----TATATAATCCCTCTCCATAGTGAGAAAAAAAATTTCTAAATTATAGTTTGATTTTTCTGTT----AA-----TATATAAGCTTCTGGATAAATACTTGTTTTTTTTT-TACCCATG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29313019 139 + 50890351 AGAAATGGTCTTGAAT-TTAAG----TTTATCTAAAATT----TATATAATCCCTCTCCATAGTGAGAAAAAAAAATTCTAAATTATAGTTTGATTTATCTGTT----AA-----TATATAAGCTTCTGGATAAATACTTG-TTTTTTTT-TACCCATG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943520 140 - 2385121 AGAAATGGTCTTGAATCTTAAG----TTTATCTAAAATT----TATATAATCCCTCTCCATAGTGAGAAAAAAAATTTCTAAATTATAGTTTGATTTATCTGTT----AA-----TATATAAGCTTCTGGATAAATACTTG-TTTTTTTT-TACCCATG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386242 140 + 4274983 AGAAATGGTCTTGAATCTTAAG----TTTATCTAAAATT----TATATAATCCCTCTCCATAGTGAGAAAAAAAATTTCTAAATTATAGTTTGATTTATCTGTT----TA-----TATATAAGCTTCTGGATAAATACTTG-GTTTTTTT-TACCCGTT i colAng1.NW_012111697v1 C 0 I 313 s calJac3.chr22 28598343 138 + 49145316 A-AGATGGTCTCGAATCTTAAG----TTTATCTAAAATT----TATATAATTCCTCTCCATAGTGAGAAAAATAATTTCTAAATTATAGTTTGATTTACCTG-T----TA-----TGTATAAGCTTCTGGATAAATACTTG-CTTTTTTC-CCCCCATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5446082 138 + 8899380 A-AGATGGTCTTGAATCTTAAG----TTTATCTAAAATT----TATATAATTCCTCTCCATAGTGAGAAAAATAATTTCTAAATTATAGCTTGATTTACGTGTT----TA-----TATATAAGCTTCTGGATAAATACTTG--TTTTTTT-CCCCCATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654248 138 - 2680843 A-AGATGGTCTTGAATCTTAAG----TTTATCTAAAATT----TATATAATTCCTCTCCATAGTGAGAAAAATAATTTCTAAATTATAGTTTGATTTAACTGTT----TA-----TATATAAGCTTCTGGATAAATACTTT--TTTTTTC-CCCCCATT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401322 139 - 4471408 A-AGATGGTCTCGAATCTTAAG----TTTATCTAAAATT----TATATAATTCCTCTCCATAGTGAGAAAAATAATTTCTAAATTATAGCTTGATTTACCTGTT----TA-----TATATAAGCTTCTGGATAAATACTTG-TTTTTTTC-CCCCCATT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3992940 134 - 30143674 AGAAATGGTACTGAATCTGAAG----TTTATCTAAAATT----TATATCATCCCTCTCCACAGT--GAAAAATAATTTTTTAATTATAGCTTAATTTACCTATT----TG-----TATAGAAGCTTCCGGACAAATACTTG-----TTTT-TCACCATT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 609033 136 + 2501019 AGAAATGGTATTGAATCTGAAG----TTTATCTAAAATT----TATATCATCCCTCTCCATAGTAAGAAAAATAATTTCTAAATTATAGTTTGATATACCTATT----TG-----TATAGAAGCTTCTGGACAAATACTTG-----CTTT-TCGCCATT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5524042 141 + 5549422 AGAAACAGTCTTGAATCTGGAG----TTTATCTATAATT----TATATCATTCCTTTCCATAATAAGAAAAATAATTTCTAAATTATAGTTTGATTTACCTATT----TGTATACTATAGAAGCTTCTGGACAAAGGCTTG-----TTGT-TCACCATT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4652720 135 - 122678785 AGAAATGGTCCCGAATCTGAAGTGCATTTATCTAAAATT------TATGATTCCTCTCCATAGTAAG--AAATAATTTCTAGATTATAGTTTGATGTACCCATT----TG-----TATATAAACTTATTGATAAATATTTG------TTT-TCCCTAGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389210 134 + 643850 AGAAATGGTCCTGAATCTGAAATATATTTATCTAATATT----TGTATAATTCTTCTC--TAGCAAA-AGAATAATTTCCCAATTATAGTTTGATTAACCCATTTGTATA-----TATATAAGCTT---GATAAATGCTTT-TCCCCTTT--------- i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111136649 347 - 145441459 I a score=602551.000000 s hg38.chr19_GL383574v1_alt 121821 37 + 155864 TGAGGTTAATTTTGGATAGGTTC-CATAGTGCAAAGTT s panTro5.chr19 36189442 37 + 61309027 TGAGGGTAATTTTGGATAGGTTC-CATAGTGCAAAGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933671 37 + 64411610 TGAGGTTAATTTTGGATAGGTTC-CATAGTGCAAAGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345386 37 - 8369475 TGAGGTTAATTTTGGATAGGTTC-CATAGTGCAAAGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942577 37 - 106955855 TGAAGTTAATTTTGGATAGGTTC-CATAGTGCAAAGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257216 37 + 53671032 TGAGGTTAATTTTGGATAGGTTC-CATAGTGCAAAGTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711125 37 + 59248254 TGAGGTTAATTTTGGATAGGTTC-CATAGTGCAAAGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583817 37 - 13342542 TGAGGTTAATTTTGGATAGGTTC-CATAGTGCAAAGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508027 37 + 7714307 TGAGGTTAATTTTGGATAGATTC-CATAGTGCAAAGTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29313158 37 + 50890351 TGAGGTTAATTTTGGATAGGTTC-CATAGTGCAAAGTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943660 37 - 2385121 TGAGGTTAATTTTGGATAGATTC-CATAGTGCAAAGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386695 37 + 4274983 TGAGGTTAATTTTGGATAGGTTC-CATAGTGCAAAGTT i colAng1.NW_012111697v1 I 313 C 0 s calJac3.chr22 28598481 37 + 49145316 TGAGGTTAATTTTGGATAGGTTC-CACAGTGCAAAGTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5446220 37 + 8899380 TGAGGTTAATTTTGTATAGGTTC-CACAGTGCAAAGTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654386 37 - 2680843 TGAGGTTAATTTTGAATAGGTTC-CACAGTGCAAAGTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401461 37 - 4471408 TGTGGTTAATTTTGGATAGGTTC-CACAGTGCAAAGTA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3993074 37 - 30143674 CAAGGTTAAATTTGGATAGGTTT-CATACTGTAAAGTT i micMur3.chr22 C 0 I 19 s proCoq1.NW_012149263v1 609169 37 + 2501019 CAAGGTTAATTTTGGATAGGTTC-CATAGTGCAAAGTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5524183 37 + 5549422 TGAGGTTAATTTTGGATAGGTTC-CATGGTGCAAAGTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4652855 35 - 122678785 CGAGGTTAATTTTGGACAGGTT--CACAGTGCAAATG- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389344 38 + 643850 TGAGGTTAATTTTAGATAGGTTCACCAAGTGTAAAGCT i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111136649 347 - 145441459 I a score=74485.000000 s hg38.chr19_GL383574v1_alt 121858 6 + 155864 GTTAAG---- s panTro5.chr19 36189479 6 + 61309027 GTTAAG---- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933708 6 + 64411610 GTTAAG---- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345423 6 - 8369475 GTTAAG---- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942614 6 - 106955855 GTTAAG---- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257253 6 + 53671032 GTTAAG---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711162 6 + 59248254 GTTAAG---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583854 6 - 13342542 GTTAAG---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508064 6 + 7714307 GTTAAG---- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29313195 6 + 50890351 GTTAAG---- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943697 6 - 2385121 GTTAAG---- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386732 6 + 4274983 GTTAAG---- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598518 6 + 49145316 GTTAAG---- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5446257 6 + 8899380 GTTAGG---- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654423 6 - 2680843 GTTAGG---- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401498 6 - 4471408 GTTAAG---- i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 609206 6 + 2501019 ATTAAG---- i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5524220 5 + 5549422 GTTGA----- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4652890 6 - 122678785 GTTAAG---- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389382 10 + 643850 GTTTAGAATG i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3993111 19 - 30143674 I e mm10.chr7 111136649 347 - 145441459 I a score=17290.000000 s hg38.chr19_GL383574v1_alt 121864 1 + 155864 A s panTro5.chr19 36189485 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933714 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345429 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942620 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257259 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711168 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583860 1 - 13342542 A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508070 1 + 7714307 A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29313201 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943703 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386738 1 + 4274983 A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598524 1 + 49145316 A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5446263 1 + 8899380 A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654429 1 - 2680843 A i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401504 1 - 4471408 A i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 609212 1 + 2501019 A i proCoq1.NW_012149263v1 C 0 I 459 s mm10.chr7 111136996 1 - 145441459 A i mm10.chr7 I 347 C 0 s canFam3.chr1 4652896 1 - 122678785 A i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389392 1 + 643850 A i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3993111 19 - 30143674 I e otoGar3.GL873654 5524225 0 + 5549422 C a score=100057.000000 s hg38.chr19_GL383574v1_alt 121865 8 + 155864 GTGGCAGT s panTro5.chr19 36189486 8 + 61309027 GTGGCACT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933715 8 + 64411610 GTGGCACT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345430 8 - 8369475 GTGGCAGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942621 8 - 106955855 GTGGCAGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257260 8 + 53671032 ATGGCAGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711169 8 + 59248254 ATGGCAGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583861 8 - 13342542 ATGGCAGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508071 8 + 7714307 GTGGCAGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29313202 8 + 50890351 GTGGCAGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943704 8 - 2385121 GTGGCAGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386739 8 + 4274983 GTGGCAGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598525 8 + 49145316 ATGGCAGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5446264 8 + 8899380 ATGGCAGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654430 8 - 2680843 ATGGCAGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401505 8 - 4471408 ATGGCAGT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5524225 8 + 5549422 GTAGCAGT i otoGar3.GL873654 C 0 I 10 s mm10.chr7 111136997 8 - 145441459 GTAGCAGT i mm10.chr7 C 0 C 0 s canFam3.chr1 4652897 4 - 122678785 ATGA---- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389393 8 + 643850 GTAGCAGT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I a score=59644.000000 s hg38.chr19_GL383574v1_alt 121873 4 + 155864 ATAG s panTro5.chr19 36189494 4 + 61309027 ATAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933723 4 + 64411610 ATAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345438 4 - 8369475 ATAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942629 4 - 106955855 ATAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257268 4 + 53671032 ATAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711177 4 + 59248254 ATAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583869 4 - 13342542 ATAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508079 4 + 7714307 ATAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29313210 4 + 50890351 ATAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943712 4 - 2385121 ATAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386747 4 + 4274983 ATAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598533 4 + 49145316 ATAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5446272 4 + 8899380 ATAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654438 4 - 2680843 ATAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401513 4 - 4471408 ATAG i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111137005 4 - 145441459 GTAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4652901 4 - 122678785 GTAG i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 389401 4 + 643850 ATAG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I e otoGar3.GL873654 5524233 10 + 5549422 I a score=16915.000000 s hg38.chr19_GL383574v1_alt 121877 2 + 155864 AA s panTro5.chr19 36189498 2 + 61309027 AA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933727 2 + 64411610 AA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345442 2 - 8369475 AA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942633 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257272 2 + 53671032 AA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711181 2 + 59248254 AA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583873 2 - 13342542 AA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508083 2 + 7714307 AA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29313214 2 + 50890351 AA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943716 2 - 2385121 AA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386751 2 + 4274983 AA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598537 2 + 49145316 AA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5446276 2 + 8899380 AA i saiBol1.JH378197 C 0 I 941 s cebCap1.NW_016107633v1 1654442 2 - 2680843 AA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401517 2 - 4471408 AA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4652906 1 - 122678785 G- i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 389405 2 + 643850 AA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I e otoGar3.GL873654 5524233 10 + 5549422 I e mm10.chr7 111137009 0 - 145441459 C a score=6695.000000 s hg38.chr19_GL383574v1_alt 121879 1 + 155864 T s panTro5.chr19 36189500 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933729 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345444 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942635 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257274 1 + 53671032 T i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711183 1 + 59248254 T i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583875 1 - 13342542 T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508085 1 + 7714307 T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29313216 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943718 1 - 2385121 T i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386753 1 + 4274983 T i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4652907 1 - 122678785 C i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389407 1 + 643850 T i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I e otoGar3.GL873654 5524233 10 + 5549422 I e mm10.chr7 111137009 0 - 145441459 C e aotNan1.NW_018505377v1 401519 0 - 4471408 C e cebCap1.NW_016107633v1 1654444 0 - 2680843 C e saiBol1.JH378197 5446278 941 + 8899380 I e calJac3.chr22 28598539 0 + 49145316 C a score=24208.000000 s hg38.chr19_GL383574v1_alt 121880 2 + 155864 TT s panTro5.chr19 36189501 2 + 61309027 TT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933730 2 + 64411610 TT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345445 2 - 8369475 TT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942636 2 - 106955855 TT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257275 2 + 53671032 TT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711184 2 + 59248254 TT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583876 2 - 13342542 TT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508086 2 + 7714307 TT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29313217 2 + 50890351 TT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943719 2 - 2385121 TT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386754 2 + 4274983 TT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598539 2 + 49145316 TT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447219 2 + 8899380 TT i saiBol1.JH378197 I 941 C 0 s cebCap1.NW_016107633v1 1654444 2 - 2680843 TT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401519 2 - 4471408 TT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4652908 2 - 122678785 TA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389408 2 + 643850 TT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I e otoGar3.GL873654 5524233 10 + 5549422 I e mm10.chr7 111137009 0 - 145441459 C a score=22800.000000 s hg38.chr19_GL383574v1_alt 121882 2 + 155864 TT s panTro5.chr19 36189503 2 + 61309027 TT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933732 2 + 64411610 TT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345447 2 - 8369475 TT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942638 2 - 106955855 TT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257277 2 + 53671032 TT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711186 2 + 59248254 TT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583878 2 - 13342542 TT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508088 2 + 7714307 TT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29313219 2 + 50890351 TT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943721 2 - 2385121 TT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386756 2 + 4274983 TT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598541 2 + 49145316 TT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447221 2 + 8899380 TT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654446 2 - 2680843 TT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401521 2 - 4471408 TT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4652910 2 - 122678785 CT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I e dasNov3.JH563638 389410 0 + 643850 C e otoGar3.GL873654 5524233 10 + 5549422 I e mm10.chr7 111137009 0 - 145441459 C a score=129543.000000 s hg38.chr19_GL383574v1_alt 121884 10 + 155864 AAGTTTTCTT s panTro5.chr19 36189505 10 + 61309027 AAGTTTTCTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933734 10 + 64411610 AAGTTTTCTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345449 10 - 8369475 AAGTTTTCTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942640 8 - 106955855 --GTTTTCTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257279 10 + 53671032 AAGTTTTCTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711188 10 + 59248254 AAGTTTTCTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583880 10 - 13342542 AAGTTTTCTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508090 10 + 7714307 AAGTTTTCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29313221 10 + 50890351 AAGTTTTCTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943723 10 - 2385121 AAGTTTTCTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386758 10 + 4274983 AGGTTTTCTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598543 10 + 49145316 AAGTTTTCTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447223 10 + 8899380 AAGTTTTCTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654448 10 - 2680843 AAGTTTTCCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401523 10 - 4471408 AAGTTTTCTC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5524243 10 + 5549422 AAGTTTTCTT i otoGar3.GL873654 I 10 C 0 s canFam3.chr1 4652912 10 - 122678785 AAGTTTTTTT i canFam3.chr1 C 0 I 244 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I e dasNov3.JH563638 389410 0 + 643850 C e mm10.chr7 111137009 0 - 145441459 C a score=59062.000000 s hg38.chr19_GL383574v1_alt 121894 6 + 155864 Gggcca s panTro5.chr19 36189515 6 + 61309027 Gggcca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933744 6 + 64411610 Gggcca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345459 6 - 8369475 Gggcca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942648 6 - 106955855 Gggcca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257289 6 + 53671032 Gggcca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711198 6 + 59248254 Gggcca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583890 6 - 13342542 Gggcca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508100 6 + 7714307 Gggcca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29313231 6 + 50890351 Gggcca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943733 6 - 2385121 Gggcca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386768 6 + 4274983 Gggcca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598553 6 + 49145316 GGGCAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447233 6 + 8899380 GGGCAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654458 6 - 2680843 GGGCAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401533 6 - 4471408 GGGCAA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5524253 6 + 5549422 AAATAA i otoGar3.GL873654 C 0 I 173 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I e dasNov3.JH563638 389410 0 + 643850 C e mm10.chr7 111137009 0 - 145441459 C e canFam3.chr1 4652922 244 - 122678785 I a score=2734137.000000 s hg38.chr19_GL383574v1_alt 121900 289 + 155864 gacatggtagtttatgcttgtaatcccagcactttgaagggccgaggcgggaggatcgcttgaggccaggagttcgagaccaacctgaacatcacagcgaaaccccatcttctgc--aga-aaaatttaaaaattacccaggcatg---------gtggtgtgtgcctgtagttccagctacttgggaggctgaggtgggaag-ttgcctg-agcccgggagatcaaggctgcagtgagccgcgatcacacaactgcagtactctagccttggcaacagagcaagagactgtAAGGTctcact s panTro5.chr19 36189521 288 + 61309027 gacatggtagtttatgcttgtagtcccagcactttgaagggccgaggcgggaggatcgcttgaggccaggagtttgagaccaacctgaacatcacagcgaaaccccgtct-ctgc--aga-aaaattaaaaaattacctgggcatg---------gtggtgtgtgcctgtagttccagctacttgggaggctgaggtgggaag-ttgcctg-agcccgggagatcgaggctgcagtgagccgcgatcacacaactgcagtactctagccttggcaacagagcaagagactgtAAGGTctcact i panTro5.chr19 C 0 C 0 s panPan2.chr19 39933750 288 + 64411610 gacatggtagtttatgcttgtaatcccagcactttgaagggccgaggcgggaggatcgcttgaggccaggagtttgagaccaacctgaacatcacagcgaaaccccgtct-ctgc--aga-aaaattaaaaaattacccgggcatg---------gtggtgtgtgcctgtagttccagctacttgggaggctgaggtgggaag-ttgcctg-agcccgggagatcgaggctgcagtgagccgcgatcacacaactgcagtactctagccttggcaacagagcaagagactgtAAGGTctcact i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345465 288 - 8369475 gacatggtagtttatgcttgtaatcccagcactttgaagggccgaggcaggaggatcgcttgaggccaggagttcgagaccaacctgaacatcacagcgaaaccccgtct-ctgc--aga-aaaattaaaaaattacctgggcatg---------gtggtgtgtgcctgtagttccagctacttgggaggctgaggtgggaag-ttgcctg-agcccgggagatcaaggctgcagtgagccgcgatcacacaactgcagtactctagccttggcaacagagcaagagactgtAAGGTctcact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942654 288 - 106955855 gacgtggtagtttaaggttgtaatcccagcactttgaagggccgaggtgggaggatcgcttgaggccaggagtgcgagaccaacctgaacatcacagcgaaaccccgtct-ctgc--aaa-aaaattaaaaaattacccgggcatg---------gtggtgtgtgcctatagttccagctacttgggaggctgaggtgggaag-ttgcctg-agcccgggagatcaaggctgcagtgagccgcgatcacacaactgcagtactctagccttggcaacagagcaagagactgtAGGGTctcacg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257295 289 + 53671032 aacatggtagtttatgcctata-tcccagcactttgaagggcttaggtgggaggatcgcttgaggccaggagttcaagaccaacctgaacaacacagcaagaccccgtct-ctgc-aaaa-aaaaataaaaaattacccaggcatg---------atggtgtgtgcctatagttccagctacttgggaggctgaggtaggaag-ttgcctgaagcccgggagatcgaggctacagtgagccgtgatcacacagctgcggtactttagccttggctacagagcaagagactgtAGGGTctcact i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711204 290 + 59248254 aacatggtagtttatgcctata-tcccagcactttgaagggcttaggtgggaggatcgcttgaggccaggagttcaagaccaacctgaacaacacagcaagaccccgtct-ctgcaaaaa-aaaaataaaaaattacccaggcatg---------atggtgtgtgcctatagttccagctacttgggaggctgaggtaggaag-ttgcctgaagcccgggagatcgaggctacagtgagccgtgatcacacagctgcggtactttagccttggctacagagcaagagactgtAGGGTctcact i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4583896 297 - 13342542 aacatggtagtttatgcctata-tcccagcactttgaagggcttaggtgggaggatcgcttgaggccaggagttcaagaccaacctgaacaacacagcaagaccccgtct-ctgc-aaaa-aaaaataaaaaattacccaggtgggtaattacccatggtgtgtgcctatagttccagctacttgggaggctgaggtaggaag-ttgcctg-agcccgggagatcgaggctacagtgagccgtgatcacacagctgcagtactttagccttggcaacagagcaagagactgtAGGGTctcact i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508106 288 + 7714307 aacatggtagtttatgcctata-tcccagcactttgaagggcttaagtgggaggatcgcttgaggccaggagttcaagaccaacctgaacaacacagcaagaccccgtct-ctgc-aaaa-aaaaataaaaaattacccaggcatg---------atggtgtgtgtctatagttccagctacttgggaggctgaggtaggaag-ttgcctg-agcccgggagatcgaggctacagtgagccgtgatcacacagctgcagtactctagcctcggcaacagagcaagagactgtAGGGTctcact i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29313237 289 + 50890351 aacatggtagtttatgcctata-tcccagcactttgaagggctcaggtgggaggatcgcttgaggccaggagttcaagaccaacctgaacaacacagcaagaccccgtct-ctgc-aaaagaaaaaaaaaaaattacccaggcatg---------atggtgtgtgcctatagttccagctacttgggaggctgaggtaggaag-ttgcctg-atcccgggagatcgaggctacagtgagccgtgatcacacagctgcaggactctagcctcggcaacagagcaagagactgtAGGGTctcact i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 943739 288 - 2385121 aacatggtagtttatgcctata-tcccagcactttgaagggcttaagtgggaggatcgcttgaggccaggagttcaagaccaacctgaacaacacagcaagaccccgtct-ctgc-aaaa-aaaaataaaaaattacccaggcatg---------atggtgtgtgtctatagttccagctacttgggaggctgaggtaggaag-ttgcctg-agcccgggagatcgaggctacagtgagccgtgatcacacagctgcagtactctagcctcggcaacagagcaagagactgtAGGGTctcact i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2386774 288 + 4274983 aacatggtagtttatgcctata-tcccagcactttgaagggctcaggtgggaggatcgcttgaggccaggagttcaagaccaacctgaacaacacagcaagaccctgtct-ctgc-aaaa-aaaaataaaaaattacccaggcatg---------atggtgtgtgcctatagttccagctacttgggaggctgaggtaggaag-ttgcctg-agcccgggagatggagtctacagtgagccgtgatcacacagctgcagtactctagcctcggcaacagagcaagaggctgtAGGGTctcact i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598559 289 + 49145316 GATATggtagtttatgcctgtaatcccagcactttgaaggggctaggcaggaggattgcttgagactaggagttcaggaccagcctgaacaacacagcaagaccctgtct-ctgc-aaaa-aaaatttaaaaattagccaggtatg---------gtggtgtgtacttatagtttcagctactt-ggaggctgaggtgggaagattgcctg-agcccgggagattgaggctgtggtgagcggtgatcacacaattgcagtactctagcctcagcaactgagcgagaccatgtAGGGTctcacg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447239 289 + 8899380 GATATGTtagtttatgcctctaatcccagcactttgaaggacctaggcaggaggattgcttgaggccaggagtttaagaccagcctgaacaacacagcaagaccctgtct-ctgc-aaaa-aaaaattaaaaattagccaggcatg---------gtggtgtgtgcttatagtttcagctactt-ggaggctgaggtgggaagattgcctg-agcccgggagattgaggctgtggtgagtggtgatcacacaacagcagtaccctagcctcagccactgagcaagaccctatAGGGTctcagt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654464 289 - 2680843 GATATggtagtttgtgcctgtaatcccagcactttgaagggcctaggcaggaggattgcttgaggccaggagttcaagaccagcctgaacaacacagcaagaccctttct-ctgc-aaaa-aaaattaaaaaattagccaggcatg---------gtggtgtgtgcttatagtttcagctactt-ggaggctgaggtgggaagattgcctg-agcccgggagattgaggctgtggtgagtggtgatcacacaactgcagtaccctagcctcggcaactgagcaagaccctgtAGGGTctcact i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401539 289 - 4471408 GATATggtagtttatgcctgtagtcccagcactttgaagggcctaggcaggaggattacttgaggccaggagttcaagaccagcctgaacaacacagcaagaccctgtct-ctgc-aaaa-aaaattaaaaaattagccaggcatg---------gtggtgtgtgcttatagtttcagctactt-ggaggctgaggtgggaagattgcctg-agcccgggagattgaggctgtggtgagcggtgatcacacaactgtagtactctagcctcggcaactgagcaagaccctgtAGGGTctcact i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I e dasNov3.JH563638 389410 0 + 643850 C e otoGar3.GL873654 5524259 173 + 5549422 I e mm10.chr7 111137009 0 - 145441459 C e canFam3.chr1 4652922 244 - 122678785 I a score=2151614.000000 s hg38.chr19_GL383574v1_alt 122189 210 + 155864 gcagcctcaatctccctggctgaaaccatcctcctacctcagcctcccaagtagctgggactacagatatatgccagcacactgggctaattttttt----ttgtttactttttagtagagtcgaagtcttgctatgttgcccaggctggtcttga-gctcctgagctcaagcagtcctcctaccttggcctcccaaagtgctgggattacaggt s panTro5.chr19 36189809 210 + 61309027 gcagcctcaatctccctggctgaaaccatcctcctacctcagcctcccaagtaggtgggactacagatatatgccagcacactgggctaattttttt----ttgtttactttttagtagagtcgaagtcttgctgtgttgcccaggctggtcttga-gctcctgagctcaagcagtcctcctaccttggcctcccaaagtgccgggattacaggt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934038 208 + 64411610 gcagcctcaatctccctggctgaaaccatcctcctacctcagcctcccaagtaggtgggactacagatatatgccagcacactgggctaattttttt----t--gttactttttagtagagtcgaagtcttgctgtgttgcccaggctggtcttga-gctcctgagctcaagcagtcctcctaccttggccacccaaagtgccgggattacaggt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345753 210 - 8369475 gcagcctcaatctccctggctgaaaccatcctcctacctcagcttcccaagtagctgggacgacagatatatgccagcacactgggctaattttttt----ttatttactttttagtagagtcgaagtcttgctatgttgcccaggctggtcttga-gctcctgagctcaagcagtcctcctaccttggcctcccaaagtgccgggattacaggt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63942942 210 - 106955855 gcagcctcagtctccctggctgaaaccatcctcctacctcagcctccaaagtagctgggactacagatctatgccagcacactgggctgattttttt----tggtttactttttagtagagtcgaagtcttgctgtgttgcccaggctggtcttga-gctcctgagctcaatcagtcctcctaccttggcctcccaaagtgccaggattacaggt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257584 208 + 53671032 gcagcctcaatctccctggctcaaaccatcctcctacctcagcctcccaagtaactgggactacagatatatgccagcacactgggctaattttttt----t-gtttac-ttttagtagagtcaaagtcttgctatgttgcccaggctgttcttga-gctcctgagctcaagcggtcttcctaccttggcctcccaaagtgctgagattacaggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711494 208 + 59248254 gcagcctcaatctccctggctcaaaccatcctcctacctcagcctcccaagtaactgggactacagatatatgccagcacactgggctaattttttt----t-gtttac-ttttagtagagtcaaagtcttgctatgttgcccaggctgttcttga-gctcctgagctcaagcagtcttcctaccttggcctcccaaagtgctgagattacaggt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584193 206 - 13342542 gcagcctcaatctccctggctcaaaccatcctcctacctcagcctcccaagtaactgggactacagatatatgccagcacactgggctaattttttt----t-gtttac-ttttagtagagtcaaagtcttgctatgttgcccaggctgttcttgaggctcctgag--caagcagtcttcctaccttggcctccc-aagtgctgagattacaggt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508394 208 + 7714307 gcagcctcaatctccctggctcaaaccatcctcctacctcagcctcccaagtaactgggactacagatatatgccagcacactgggctaattttttt----t-gtttac-ttttagtagagtcgaagtcttgctgtgttgcccaggctgttcttga-gctcctgagctcaagcagtcttcctaccttggcctcccaaagtgctgggattacaggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29313526 208 + 50890351 gcagcctcaatctccctggttcaaaccatcctcctacctcagcctcccaagtaactgggactacagatatatgccagcacactgtgctaattttttt----t-gtttac-ttttagtagagtcaaagtcttgctatgttgcccaggctgttcttga-gctcctgagctcaagcagtcttcctaccttggcctcccaaagtgctgggattacaggt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 944027 208 - 2385121 gcagcctcaatctccctggctcaaaccatcctcctacctcagcctcccaagtaactgggactacagatatgtgccagcacactgggctaattttttt----t-gtttac-ttttagtagagtcgaagtcttgctatgttgcccaggctgttcttga-gctcctgagctcaagcagtcttcctaccttggcctcccaaagtgctgggattacaggT i manLeu1.NW_012102454v1 C 0 M 720 s colAng1.NW_012111697v1 2387062 208 + 4274983 gcagcctcaatctccctggctcaaaccatcctcctacctcagcctcccaagtaactgggactacagatatatgccagcacactgggctaattttttt----t-gtttac-ttttagtagagtcgaagtcttgctatgttgcccaggttgttcttga-gctcttgagctcaagcagtcttcctaccttggcctcccaaagtgccgggattacaggt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28598848 211 + 49145316 gcaacctcaatctccctggctcaagccatcctgctacctcagcctcccaagtatctgggactatagatatatgccagcacactgggctaattttttttg--ttgtttat-ttttagtagagactaagtctcactatgttgctcaggctgatcttga-gctcctgaactgaagcagtcctcctactttggtctcccaaagtgctgggattacaggt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447528 209 + 8899380 gcagcctcaatgtccctggctcaagcccatctgctaccttagcctctcaagtatctgggactacagatatatgccagcacactgggctaattttttt----ttgtttat-ttttagtagagacgaagtctcactatgttgcttaggctgatcttga-gctcctgagctgaagcagtcctcctaccttggtcttccaaagtgctgggattacaggt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654753 213 - 2680843 gcagcctcaatctccctggctcaagccattctgctacctcagcctcccaagtatctggaactacagatatatgccagcacactgggctaattttttttgttttgtttat-tgttagtagagacgaagtctcactatgttgctcaggctgatcttgg-gctcctgagctgaagcagtcctcctaccttgctctcccaaagtgctgggattacaggt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 401828 210 - 4471408 gcagcctcaatctccctggctcaggctatcctgctacctcagcctcccaagtatctgggactacagatatatgccagcacactgggctaatttttttt---ttgtttat-ttttagtagagatgaagtcacactatgtcgctcaggctgatcttga-gctcctgagctgaagcaatcctcctaccttggtctcccaaagtgctgggattacatgt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5524432 189 + 5549422 gcaacctcaaattcttgggctaacatgatccacttgcctcagcctcccaagtgtctgggactacaggtgcctaccacaatgcctggcta----tttt----t--------------cagagacagagtcttgctc--ttgctcaggttggtcttgt-attcctgagcttaggtagtccacctgcctcaccctcccaga-tgctagcattacagac i otoGar3.GL873654 I 173 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I e dasNov3.JH563638 389410 0 + 643850 C e mm10.chr7 111137009 0 - 145441459 C e canFam3.chr1 4652922 244 - 122678785 I a score=146571.000000 s hg38.chr19_GL383574v1_alt 122399 17 + 155864 atgagccaccgtgccca s panTro5.chr19 36190019 17 + 61309027 atgagccaccgtgccca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934246 17 + 64411610 atgagccaccgtgccca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345963 17 - 8369475 atgagccaccgtgccca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943152 17 - 106955855 atgagccgccgcgccca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257792 17 + 53671032 atgagccacagcgtcca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711702 17 + 59248254 atgagccacagcgtcca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584399 15 - 13342542 atgagccacA--GTCCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508602 17 + 7714307 gtgagccaccgtgtccA i cerAty1.NW_012005268v1 C 0 I 94 s chlSab2.chr6 29313734 17 + 50890351 atgagccaccgtgtcca i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2387270 17 + 4274983 atgagccaccgtgtcca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599059 17 + 49145316 atgagcctctgtgccca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447737 17 + 8899380 atgagcctccgtgccca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654966 17 - 2680843 atgagcctccgcgccca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 402038 17 - 4471408 atgagcctccgtgccca i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5524621 17 + 5549422 atgagccaccacacccA i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I e dasNov3.JH563638 389410 0 + 643850 C e mm10.chr7 111137009 0 - 145441459 C e canFam3.chr1 4652922 244 - 122678785 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M a score=157406.000000 s hg38.chr19_GL383574v1_alt 122416 23 + 155864 gccAAGACCCTGTCTTTaaaaa-a- s panTro5.chr19 36190036 23 + 61309027 gccAAGACCCTGTCTTTaaaaa-a- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934263 23 + 64411610 gccAAGACCCTGTCTTTaaaaa-a- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6345980 23 - 8369475 gccAAGACCCTGTCTTTaaaaa-a- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943169 23 - 106955855 gccAAGACCCTGTCTTTaaaaa-a- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257809 23 + 53671032 gccAAGACCCTGTCTTtaaaaa-a- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711719 23 + 59248254 gccAAGACCCTGTCTTtaaaaa-a- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584414 22 - 13342542 GCCAAGACCCTGTCTTT-AAAA-A- i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29313751 23 + 50890351 gccAAGACCCTGTCTTTaaaaa-a- i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2387287 23 + 4274983 gccAAGACCCTGTCTTTAAAAA-A- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599076 22 + 49145316 gccAAGACCCTGTCTTTAAAAA--- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447754 22 + 8899380 gccAAGACCCTGTCtttaaaaa--- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1654983 22 - 2680843 gccAAGACCCTGTCTTTAAAAA--- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 402055 23 - 4471408 gccAAGACCCTGTCTTTAAAAAA-- i aotNan1.NW_018505377v1 C 0 I 334 s otoGar3.GL873654 5524638 11 + 5549422 -------------CTCTTAAAA-TT i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I e dasNov3.JH563638 389410 0 + 643850 C e mm10.chr7 111137009 0 - 145441459 C e canFam3.chr1 4652922 244 - 122678785 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=45747.000000 s hg38.chr19_GL383574v1_alt 122439 6 + 155864 ataagt s panTro5.chr19 36190059 6 + 61309027 ataagt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934286 6 + 64411610 ataagt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346003 6 - 8369475 ataagt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943192 6 - 106955855 ataagt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257832 6 + 53671032 ataagt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711742 6 + 59248254 ataagt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584436 6 - 13342542 ATAAGT i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29313774 6 + 50890351 ataagt i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2387310 6 + 4274983 ATAAGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599098 6 + 49145316 ATAAGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447776 6 + 8899380 ataagt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1655005 6 - 2680843 ATAAGT i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5524649 6 + 5549422 GCAGGT i otoGar3.GL873654 C 0 T 422 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I e dasNov3.JH563638 389410 0 + 643850 C e mm10.chr7 111137009 0 - 145441459 C e canFam3.chr1 4652922 244 - 122678785 I e aotNan1.NW_018505377v1 402078 334 - 4471408 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=6006.000000 s hg38.chr19_GL383574v1_alt 122445 1 + 155864 a s panTro5.chr19 36190065 1 + 61309027 a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934292 1 + 64411610 a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346009 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943198 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257838 1 + 53671032 a i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711748 1 + 59248254 a i macFas5.chr19 C 0 C 0 s chlSab2.chr6 29313780 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2387316 1 + 4274983 A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599104 1 + 49145316 A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447782 1 + 8899380 a i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1655011 1 - 2680843 A i cebCap1.NW_016107633v1 C 0 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I e dasNov3.JH563638 389410 0 + 643850 C e otoGar3.GL873654 5524655 422 + 5549422 T e mm10.chr7 111137009 0 - 145441459 C e canFam3.chr1 4652922 244 - 122678785 I e aotNan1.NW_018505377v1 402078 334 - 4471408 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I e macNem1.NW_012011689v1 4584442 0 - 13342542 C a score=58786.000000 s hg38.chr19_GL383574v1_alt 122446 7 + 155864 aaaacaa s panTro5.chr19 36190066 7 + 61309027 aaaacaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934293 7 + 64411610 aaaacaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346010 7 - 8369475 aaaacaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943199 7 - 106955855 aaaacaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257839 7 + 53671032 aaaacaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711749 7 + 59248254 aaaacaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584442 7 - 13342542 AAAACAA i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29313781 7 + 50890351 aaaacaa i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2387317 7 + 4274983 AAAACAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599105 7 + 49145316 AAAACAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447783 7 + 8899380 aaaacaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1655012 7 - 2680843 AAAACAA i cebCap1.NW_016107633v1 C 0 I 1816 s aotNan1.NW_018505377v1 402412 7 - 4471408 AAAACAA i aotNan1.NW_018505377v1 I 334 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I e dasNov3.JH563638 389410 0 + 643850 C e otoGar3.GL873654 5524655 422 + 5549422 T e mm10.chr7 111137009 0 - 145441459 C e canFam3.chr1 4652922 244 - 122678785 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=44644.000000 s hg38.chr19_GL383574v1_alt 122453 9 + 155864 aaacaaaaa- s panTro5.chr19 36190073 9 + 61309027 aaacaaaaa- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934300 9 + 64411610 aaacaaaaa- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346017 9 - 8369475 aaacaaaaa- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943206 9 - 106955855 aaacaaaaa- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257846 10 + 53671032 aaacaaaaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711756 10 + 59248254 aaacaaaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584449 10 - 13342542 AAACAAAAAT i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29313788 9 + 50890351 aaacaaaaa- i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2387324 9 + 4274983 AAACAAAAG- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599112 9 + 49145316 AAGTAAAAA- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447790 9 + 8899380 aaataaaaa- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402419 9 - 4471408 AAATAAAAA- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993111 19 - 30143674 I e dasNov3.JH563638 389410 0 + 643850 C e otoGar3.GL873654 5524655 422 + 5549422 T e mm10.chr7 111137009 0 - 145441459 C e canFam3.chr1 4652922 244 - 122678785 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=21371.000000 s hg38.chr19_GL383574v1_alt 122462 3 + 155864 aTA s panTro5.chr19 36190082 3 + 61309027 aTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934309 3 + 64411610 aTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346026 3 - 8369475 aTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943215 3 - 106955855 aTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257856 3 + 53671032 ata i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711766 3 + 59248254 ata i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584459 2 - 13342542 AT- i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29313797 3 + 50890351 aTA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2387333 3 + 4274983 ATA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599121 3 + 49145316 ATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447799 3 + 8899380 ata i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402428 3 - 4471408 ATA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3993130 3 - 30143674 ATA i micMur3.chr22 I 19 C 0 s otoGar3.GL873654 5524233 3 + 5549422 ATA i otoGar3.GL873654 T 422 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e dasNov3.JH563638 389410 0 + 643850 C e mm10.chr7 111137009 0 - 145441459 C e canFam3.chr1 4652922 244 - 122678785 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=45507.000000 s hg38.chr19_GL383574v1_alt 122465 6 + 155864 GAATTT s panTro5.chr19 36190085 6 + 61309027 GAATTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934312 6 + 64411610 GAATTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346029 6 - 8369475 GAATTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943218 6 - 106955855 GAATTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257859 6 + 53671032 taatTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711769 6 + 59248254 taatTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584461 4 - 13342542 --ATTT i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29313800 6 + 50890351 TAATTT i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2387336 6 + 4274983 TAATTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599124 6 + 49145316 GAATTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447802 6 + 8899380 gaattt i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402431 6 - 4471408 GAATTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3993133 6 - 30143674 GAAGTT i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5524236 6 + 5549422 GAATTT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111137009 6 - 145441459 GGATTT i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e dasNov3.JH563638 389410 0 + 643850 C e canFam3.chr1 4652922 244 - 122678785 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=247208.000000 s hg38.chr19_GL383574v1_alt 122471 23 + 155864 TAAGTCTTCTTAAATAACTTTCT s panTro5.chr19 36190091 23 + 61309027 TAAGTCTTCTTAAATAACTTTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934318 23 + 64411610 TAAGTCTTCTTAAATAACTTTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346035 23 - 8369475 TAAGTCTTCTTAAATAACTTTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943224 23 - 106955855 TAAGTCTTCTTGAATAACTTTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257865 23 + 53671032 TAAGTCTTCTTAAATAACTTTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711775 23 + 59248254 TAAGTCTTCTTAAATAACTTTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584465 22 - 13342542 TAAGTCTTCTTAAATAAC-TTCT i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29313806 23 + 50890351 TAAGTCTTCTTAAATAACTTTCT i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2387342 23 + 4274983 TAAGTCTTCTTAAATAACTTTCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599130 23 + 49145316 TAAGTCTTCGTAAATAACTTTCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447808 23 + 8899380 taaGTCTTCTTAAGTAACTTTCT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402437 23 - 4471408 TAAGTCTTGTTAAATAACTTTCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3993139 23 - 30143674 TAAGTTTTCTTAAATAACTTTCT i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5524242 23 + 5549422 TAAGTTTTCTTAAATAATTTTCT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111137015 23 - 145441459 TAAGTTTTCTTGAATAATTTTCT i mm10.chr7 C 0 I 1247 s dasNov3.JH563638 389410 23 + 643850 TACGTTCACTTACATAACTTTCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e canFam3.chr1 4652922 244 - 122678785 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=162968.000000 s hg38.chr19_GL383574v1_alt 122494 21 + 155864 AATGGACACAATT-AGTTTTCA s panTro5.chr19 36190114 21 + 61309027 AATGGACACAATT-AGTTTTCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934341 21 + 64411610 AATGGACACAATT-AGTTTTCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346058 21 - 8369475 AATGGACACAATT-AGTTTTCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943247 17 - 106955855 AATGGACACAA-----TTTTCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257888 21 + 53671032 AATGGACATAATT-AGTTTTCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711798 21 + 59248254 AATGGACATAATT-AGTTTTCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584487 21 - 13342542 ATATGACATAATT-AGTTTTCA i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29313829 21 + 50890351 AATGGACATAATT-AGTTTTCA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2387365 21 + 4274983 AATGGACATAATT-AGTTTTCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599153 21 + 49145316 AATGGACACAGTA-AGTTTTCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447831 21 + 8899380 AATGGACACAATA-AGTTTTCA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402460 21 - 4471408 AATGGACACAATA-AGTTTTCA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3993162 21 - 30143674 AATAGATACAATT-AGTTTTCA i micMur3.chr22 C 0 I 114 s otoGar3.GL873654 5524265 22 + 5549422 AATGGACACAATTAAGTCTTCA i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 389433 20 + 643850 AATGGATTCC-TT-AGTTTTCA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e mm10.chr7 111137038 1247 - 145441459 I e canFam3.chr1 4652922 244 - 122678785 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=285106.000000 s hg38.chr19_GL383574v1_alt 122515 66 + 155864 GTAATCCAAC-------C-------------TTTTTTTTAGAAGTTTTGAAAACTTTTTTTTGGATACCTGGGCT---------TTTGCACATTG----------------- s panTro5.chr19 36190135 66 + 61309027 GTAATCCAAC-------C-------------TTTTTTTTAGAAGTTTTGAAAACTTTTTTTTGGATACCTGGGCT---------TTTGCACATTG----------------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934362 67 + 64411610 GTAATCCAAC-------C------------TTTTTTTTTAGAAGTTTTGAAAACTTTTTTTTGGATACCTGGGCT---------TTTGCACATTG----------------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346079 66 - 8369475 GTAATCCAAC-------C-------------TTTTTTTTAGAAGTTTTGAAAACTTTTTTTTGGATACCTGGGCT---------TTTGCACATTG----------------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943264 78 - 106955855 GTAATCCAAC-------CtttttttttttttttttttttACAAGTTTTGAAAAC-TTTTTTTGGATACCTGGGCT---------TTTGCACATTG----------------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257909 61 + 53671032 GTAGTCCAAC-------C-------------A-TTTTTTAC--GTTTTGAAAAC--TTTTTGGGATACCTGGGCT---------TTTTCACATTG----------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711819 61 + 59248254 GTAGTCCAAC-------C-------------A-TTTTTTAC--GTTTTGAAAAC--TTTTTGGGATACCTGGGCT---------TTTTCACATTG----------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584508 63 - 13342542 GTAGTCCAAC-------C-------------ATTTTTTTAC-AAGTTTGAAAAC--TTTTTGGGATACCTGGGCT---------TTTTCACATTG----------------- i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29313850 64 + 50890351 GTAGTCCAAC-------C-------------G-TTTTTTACAAGTTTTGAAAAC-TTTTTTGGGCTACCTGGGCT---------TTTTCACATTG----------------- i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2387386 64 + 4274983 GTAGTCCAAC-------C-------------G-TTTTTTACAAGTTTTGAAAAC-TTTTTTGGGATACCTGGGCT---------TTTTCACATTG----------------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599174 65 + 49145316 G---TTCAAC-----TTT-------------TTTTTTTAACAAGTTTTGAAAACTTTTGTTTGGATAAGTGGGCT---------TTTTCACATCA----------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447852 67 + 8899380 G---TTCAAC---TTTTT-------------TTTTTTTTACAAGTTTTGAAAACTTTTGTTTGGATAAGTGGGCT---------TTTTTACATCG----------------- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402481 70 - 4471408 A---TTCAACTTTTTTTT-------------TTTTTTTTACAAGTTTTGAAAACTTTTGTTTGGATAAGTGGGCT---------TTTTCACATCT----------------- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5524287 63 + 5549422 CTAGTCCAAC-------T-------------T-TCTTATACAAGTTTGAAAAAC--TTTTTAGGATAGCTTTTTT---------TCCCCACATGA----------------- i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 389453 89 + 643850 CTAGTCTGAC-------T-------------T-GGTTTTACAAACCTCGAAACT--TATTTTGGATAACTGAACTCAAGCTAGACTTCAACAGAGATGAATGGATCAGGCCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 609213 459 + 2501019 I e micMur3.chr22 3993183 114 - 30143674 I e mm10.chr7 111137038 1247 - 145441459 I e canFam3.chr1 4652922 244 - 122678785 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=186824.000000 s hg38.chr19_GL383574v1_alt 122581 23 + 155864 TA-CCACACTGTAACAAAAATAAA s panTro5.chr19 36190201 23 + 61309027 TA-CCACACTGTAACAAAAATAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934429 23 + 64411610 TA-CCACACTGTAACAAAAATAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346145 23 - 8369475 TA-CCACACTGTAACAAAAATAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943342 23 - 106955855 TA-CCACACTGTAACAAAAATAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257970 23 + 53671032 TA-CCACACTGTAACAAAAATAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711880 23 + 59248254 TA-CCACACTGTAACAAAAATAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584571 21 - 13342542 TA--CACACTGTAA-AAAAATAAA i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29313914 23 + 50890351 TA-CCACACTGTAACAAAAATAAA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2387450 23 + 4274983 TA-CCACACTGTAACAAAAATAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599239 22 + 49145316 TACCCACAC--TAACAAAAATAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447919 21 + 8899380 TA-CCACAC--TAACAAAAATAAA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402551 21 - 4471408 TA-CCACAC--TAACAAAAATAAA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 609672 23 + 2501019 TA-CCACACTGTAACAAAAATAAA i proCoq1.NW_012149263v1 I 459 I 109 s otoGar3.GL873654 5524350 22 + 5549422 TA-CCACACTGTAATAAAACTAA- i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 389542 23 + 643850 TT-TCACACATTAACAAAAATAAA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3993183 114 - 30143674 I e mm10.chr7 111137038 1247 - 145441459 I e canFam3.chr1 4652922 244 - 122678785 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=173569.000000 s hg38.chr19_GL383574v1_alt 122604 34 + 155864 CCGCAGGTTTCTAACTGGTGTAGA---------CTGTT--GA-----TTT s panTro5.chr19 36190224 34 + 61309027 CCGCAGGTTTCTAACTGGTGTAGA---------CTGTT--GA-----TTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934452 34 + 64411610 CCGCAGGTTTCTAACTGGTGTAGA---------CTGTT--GA-----TTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346168 34 - 8369475 CCGCAGGTTTCTAACTGGTGTAGA---------CTGTT--GA-----TTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943365 34 - 106955855 CCGCAAGTTTCTAACTGGTGTAGA---------TTATT--GA-----TTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30257993 43 + 53671032 CTGCAGGTTTCTAACTGGTGTAGAtttttttttttttt--tt-----ttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711903 43 + 59248254 CTGCAGGTTTCTAACTGGTGTAGAtttttttttttttt--tt-----ttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584592 33 - 13342542 CTGCAGGTTTCTAACTGGTGTAGA----------tttt--tt-----ttt i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29313937 34 + 50890351 CCACAGGTTTCTAACTGGTGTAGA---------TTGTT--GA-----ttt i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2387473 36 + 4274983 CCGCAGGTTTCTAACTGATGTAGA---------TTGTTGAtt-----ttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599261 34 + 49145316 CTTCAGGTTTCTAACTGGTGTAGA---------TTGTT--GA-----ATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5447940 39 + 8899380 CCACAGGTTTCTAACTGGTGTAGA---------TTGTT--Gatttttttt i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402572 34 - 4471408 CCACAGGTTTCTAACTGGTGTAGA---------TTATT--AA-----ttt i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 389565 33 + 643850 ATGCAGGTTTTCAGTACGTGTAGA---------ATTTC--AG-----AA- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e micMur3.chr22 3993183 114 - 30143674 I e otoGar3.GL873654 5524372 0 + 5549422 C e mm10.chr7 111137038 1247 - 145441459 I e canFam3.chr1 4652922 244 - 122678785 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=65866.000000 s hg38.chr19_GL383574v1_alt 122638 8 + 155864 TTTTTTTT s panTro5.chr19 36190258 8 + 61309027 TTTTTTTT i panTro5.chr19 C 0 I 2 s panPan2.chr19 39934486 8 + 64411610 TTTTTTTT i panPan2.chr19 C 0 I 2 s gorGor5.CYUI01015150v1 6346202 8 - 8369475 TTTTTTTT i gorGor5.CYUI01015150v1 C 0 I 5 s nomLeu3.chr10 63943399 6 - 106955855 TTTTTT-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258036 8 + 53671032 tttttttt i rheMac8.chr19 C 0 I 5 s macFas5.chr19 34711946 8 + 59248254 tttttttt i macFas5.chr19 C 0 I 5 s macNem1.NW_012011689v1 4584625 8 - 13342542 tttttttt i macNem1.NW_012011689v1 C 0 I 5 s chlSab2.chr6 29313971 8 + 50890351 tttttttt i chlSab2.chr6 C 0 I 5 s colAng1.NW_012111697v1 2387509 8 + 4274983 tttttttt i colAng1.NW_012111697v1 C 0 I 5 s calJac3.chr22 28599295 8 + 49145316 TTTTTTTT i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5447979 8 + 8899380 tttttttt i saiBol1.JH378197 C 0 I 1 s aotNan1.NW_018505377v1 402606 8 - 4471408 tttttttt i aotNan1.NW_018505377v1 C 0 I 70 s micMur3.chr22 3993297 8 - 30143674 TTTTTTTC i micMur3.chr22 I 114 C 0 s dasNov3.JH563638 389598 8 + 643850 TTTTTTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e otoGar3.GL873654 5524372 0 + 5549422 C e mm10.chr7 111137038 1247 - 145441459 I e canFam3.chr1 4652922 244 - 122678785 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=138008.000000 s hg38.chr19_GL383574v1_alt 122646 23 + 155864 AACAAATTAGGTTTGAATAAATT s panTro5.chr19 36190268 23 + 61309027 AACAAATTAGGTTTGAATAAATT i panTro5.chr19 I 2 C 0 s panPan2.chr19 39934496 23 + 64411610 ACTAAATTAGGTTTGAATAAATT i panPan2.chr19 I 2 C 0 s gorGor5.CYUI01015150v1 6346215 23 - 8369475 AACAAATTAGGTTTGAATAAATT i gorGor5.CYUI01015150v1 I 5 C 0 s nomLeu3.chr10 63943405 23 - 106955855 AACAAATTAGGTTTGAATAAATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258049 23 + 53671032 tACAAATTAGGTTTGAATAAATT i rheMac8.chr19 I 5 C 0 s macFas5.chr19 34711959 23 + 59248254 tACAAATTAGGTTTGAATAAATT i macFas5.chr19 I 5 C 0 s macNem1.NW_012011689v1 4584638 22 - 13342542 tACAAATTA-GTTTGAATAAATT i macNem1.NW_012011689v1 I 5 C 0 s chlSab2.chr6 29313984 23 + 50890351 tACAAATTAGGTTTGAATAAATT i chlSab2.chr6 I 5 T 4904 s colAng1.NW_012111697v1 2387522 23 + 4274983 tACAAATTAGGTTTGAATAAATT i colAng1.NW_012111697v1 I 5 C 0 s calJac3.chr22 28599304 23 + 49145316 TACAAATTAGTTTTAAAGAAATG i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5447988 23 + 8899380 tacaaattagttttaaagaaatt i saiBol1.JH378197 I 1 C 0 s micMur3.chr22 3993305 23 - 30143674 AACAAATTGGGTTTGAAGAAATT i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5524372 4 + 5549422 -------------------AATT i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 389606 23 + 643850 AAGAAATTGGGTTTAGAAAAATG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e mm10.chr7 111137038 1247 - 145441459 I e canFam3.chr1 4652922 244 - 122678785 I e aotNan1.NW_018505377v1 402614 70 - 4471408 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=17020.000000 s hg38.chr19_GL383574v1_alt 122669 4 + 155864 ATAT s panTro5.chr19 36190291 4 + 61309027 ATAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934519 4 + 64411610 ATAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346238 4 - 8369475 ATAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943428 4 - 106955855 ATAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258072 4 + 53671032 ATGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711982 4 + 59248254 ATGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584660 4 - 13342542 ATGT i macNem1.NW_012011689v1 C 0 C 0 s colAng1.NW_012111697v1 2387545 4 + 4274983 ATGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599327 4 + 49145316 ATAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448011 4 + 8899380 atat i saiBol1.JH378197 C 0 C 0 s micMur3.chr22 3993328 4 - 30143674 ACAT i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5524376 3 + 5549422 GCA- i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 389629 4 + 643850 ATAT i dasNov3.JH563638 C 0 I 3 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e mm10.chr7 111137038 1247 - 145441459 I e chlSab2.chr6 29314007 4904 + 50890351 T e canFam3.chr1 4652922 244 - 122678785 I e aotNan1.NW_018505377v1 402614 70 - 4471408 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=64853.000000 s hg38.chr19_GL383574v1_alt 122673 13 + 155864 AATTGCTTTGTGG s panTro5.chr19 36190295 13 + 61309027 AATTGCTTTGTGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934523 13 + 64411610 AATTGCTTTGTGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346242 13 - 8369475 AATTGCTTTGTGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943432 13 - 106955855 AATTGGTTTGTGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258076 13 + 53671032 AATTGCTTTGTAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711986 13 + 59248254 AATTGCTTTGTGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584664 13 - 13342542 AATTGCTTTGTGA i macNem1.NW_012011689v1 C 0 C 0 s colAng1.NW_012111697v1 2387549 13 + 4274983 AATTGCTTTGTGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599331 13 + 49145316 CATTGCTTTGTGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448015 13 + 8899380 CATTGCTTTGTGA i saiBol1.JH378197 C 0 C 0 s micMur3.chr22 3993332 13 - 30143674 CAGTGCTTTGTGA i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5524379 4 + 5549422 ---------GGGG i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e dasNov3.JH563638 389633 3 + 643850 I e mm10.chr7 111137038 1247 - 145441459 I e chlSab2.chr6 29314007 4904 + 50890351 T e canFam3.chr1 4652922 244 - 122678785 I e aotNan1.NW_018505377v1 402614 70 - 4471408 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=18456.000000 s hg38.chr19_GL383574v1_alt 122686 5 + 155864 ttttt- s panTro5.chr19 36190308 5 + 61309027 ttttt- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934536 5 + 64411610 ttttt- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346255 5 - 8369475 ttttt- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943445 5 - 106955855 ttttt- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258089 5 + 53671032 ttttt- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34711999 5 + 59248254 ttttt- i macFas5.chr19 C 0 C 0 s colAng1.NW_012111697v1 2387562 5 + 4274983 ttttt- i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5448028 5 + 8899380 TTTTT- i saiBol1.JH378197 C 0 C 0 s micMur3.chr22 3993345 5 - 30143674 -TTTTT i micMur3.chr22 C 0 I 22 s otoGar3.GL873654 5524383 4 + 5549422 -TTTT- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e dasNov3.JH563638 389633 3 + 643850 I e mm10.chr7 111137038 1247 - 145441459 I e chlSab2.chr6 29314007 4904 + 50890351 T e canFam3.chr1 4652922 244 - 122678785 I e aotNan1.NW_018505377v1 402614 70 - 4471408 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e calJac3.chr22 28599344 0 + 49145316 C e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I e macNem1.NW_012011689v1 4584677 0 - 13342542 C a score=10010.000000 s hg38.chr19_GL383574v1_alt 122691 2 + 155864 tt s panTro5.chr19 36190313 2 + 61309027 tt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934541 2 + 64411610 tt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346260 2 - 8369475 tt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943450 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258094 2 + 53671032 tt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712004 2 + 59248254 tt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584677 2 - 13342542 tt i macNem1.NW_012011689v1 C 0 C 0 s colAng1.NW_012111697v1 2387567 2 + 4274983 tt i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5448033 2 + 8899380 TT i saiBol1.JH378197 C 0 I 13 s otoGar3.GL873654 5524387 2 + 5549422 TT i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e micMur3.chr22 3993350 22 - 30143674 I e dasNov3.JH563638 389633 3 + 643850 I e mm10.chr7 111137038 1247 - 145441459 I e chlSab2.chr6 29314007 4904 + 50890351 T e canFam3.chr1 4652922 244 - 122678785 I e aotNan1.NW_018505377v1 402614 70 - 4471408 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e calJac3.chr22 28599344 0 + 49145316 C e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=18088.000000 s hg38.chr19_GL383574v1_alt 122693 20 + 155864 gtttttttttttttg-atgga s panTro5.chr19 36190315 20 + 61309027 ttttttctttttttg-atgga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934543 21 + 64411610 tttttcttttttttgtatgga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346262 13 - 8369475 -------tttttttg-atgga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943452 17 - 106955855 tttt---tttttttg-acgga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258096 18 + 53671032 ttttt--tttttgag-acgga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712006 18 + 59248254 ttttt--tttttgag-acgga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584679 18 - 13342542 ttttt--tttttgag-acgga i macNem1.NW_012011689v1 C 0 C 0 s colAng1.NW_012111697v1 2387569 18 + 4274983 ttttt--tttttgag-acgga i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5524389 5 + 5549422 ------GTTGT---------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e micMur3.chr22 3993350 22 - 30143674 I e dasNov3.JH563638 389633 3 + 643850 I e mm10.chr7 111137038 1247 - 145441459 I e chlSab2.chr6 29314007 4904 + 50890351 T e canFam3.chr1 4652922 244 - 122678785 I e aotNan1.NW_018505377v1 402614 70 - 4471408 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e saiBol1.JH378197 5448035 13 + 8899380 I e calJac3.chr22 28599344 0 + 49145316 C e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=213456.000000 s hg38.chr19_GL383574v1_alt 122713 54 + 155864 gtctcgctctgttgcccaggctggagtgcagtggggtaatcttggctcactgca s panTro5.chr19 36190335 54 + 61309027 gtctcgctctgttgcccaggctggagtgcagtggggtaatcttggctcactgca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934564 54 + 64411610 gtctcgctctgttgcccaggctggagtgcagtggggtaatcttggctcactgca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346275 54 - 8369475 gtctcgctctgttgcccaggctggagtgcagtggggtaatcttggctcactgca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943469 54 - 106955855 gtcttgctctgtcgcccaggctggagtgcagtggggtgatcttggctcacggca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258114 54 + 53671032 gtcttgctctgttgcccaggctggagtgcagtggggtgatcttggctcactgca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712024 54 + 59248254 gtcttgctctgttgcccaggctggagtgcagtggggtgatcttggctcactgca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584697 53 - 13342542 gtc-tgctctgttgcccaggctggagtgcagtggggtgatcttggctcactgca i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29309103 54 + 50890351 gtcttgctctgtcgcccaggttggagtgcagtggcaccatcttggctcactgca i chlSab2.chr6 T 4904 C 0 s colAng1.NW_012111697v1 2387587 54 + 4274983 gtctcgctctgttgcccaggctggagtgcagtggtgcaatcttggctcactgca i colAng1.NW_012111697v1 C 0 I 678 s otoGar3.GL873654 5524394 41 + 5549422 ---------TGTTGCCCTCAGTATGgtgca-tggcg---tcatagctcttagca i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e micMur3.chr22 3993350 22 - 30143674 I e dasNov3.JH563638 389633 3 + 643850 I e mm10.chr7 111137038 1247 - 145441459 I e canFam3.chr1 4652922 244 - 122678785 I e aotNan1.NW_018505377v1 402614 70 - 4471408 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e saiBol1.JH378197 5448035 13 + 8899380 I e calJac3.chr22 28599344 0 + 49145316 C e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=284720.000000 s hg38.chr19_GL383574v1_alt 122767 87 + 155864 acccctgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcacctgccaccatacctggctaa s panTro5.chr19 36190389 87 + 61309027 acccctgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcacctgccaccatgcctggctaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934618 87 + 64411610 acccctgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcacctgccaccatgcctggctaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346329 87 - 8369475 acccctgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcacctgccaccatgcctggctaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943523 87 - 106955855 acccctgcctcccaggttcaagcagttcttctgcctcagcctcctgagtatctgggattacaggcgcctgccaccatgcctggctaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258168 87 + 53671032 acctccaccttccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattgcaggtgcctgccaccatgcctggctaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712078 87 + 59248254 acctccaccttccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattgcaggtgcctgccaccatgcctggctaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584750 84 - 13342542 acctccacctttcaggttcaagcgattctcctgcctcagcctcct-agtagct-ggattgcaggtgcctgccaccatgcc-ggctaa i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29309157 87 + 50890351 tgctccgcctcctgagttcatgccattctcctgcctcagcttcccgagtagctgggactacaggcgcctaccaccacagctggctaa i chlSab2.chr6 C 0 I 1 s otoGar3.GL873654 5524435 87 + 5549422 acctcaaattcttgggctaacatgatccacttgcctcagcctcccaagtgtctgggactacaggtgcctaccacaatgcctggctat i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e micMur3.chr22 3993350 22 - 30143674 I e dasNov3.JH563638 389633 3 + 643850 I e mm10.chr7 111137038 1247 - 145441459 I e canFam3.chr1 4652922 244 - 122678785 I e aotNan1.NW_018505377v1 402614 70 - 4471408 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e saiBol1.JH378197 5448035 13 + 8899380 I e calJac3.chr22 28599344 0 + 49145316 C e colAng1.NW_012111697v1 2387641 678 + 4274983 I e manLeu1.NW_012102454v1 944235 720 - 2385121 M e cerAty1.NW_012005268v1 5508619 94 + 7714307 I a score=690457.000000 s hg38.chr19_GL383574v1_alt 122854 130 + 155864 tttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcgaactcttgacct--cgtgatccacccgccttggcctcccaaagtgctgggattagaggcgtgaaccactgcacGTGGT-------------- s panTro5.chr19 36190476 130 + 61309027 tttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcttgacct--cgtgatccacccgccttggcctcccaaagtgctgggattagaggcgtgaaccactgcacgcggT-------------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934705 130 + 64411610 tttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcttgacct--cgtgatccacccgccttggcctcccaaagtgctgggattagaggcgtgaaccactgcacgcggT-------------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346416 130 - 8369475 tttttgtatttttagcagagacggggtttcaccatgttggccaggctggtctcgaactcttgacct--cgtgatccacccaccttggcctcccaaagtgctgggattagaggcgtgaaccactgcacgcggT-------------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943610 130 - 106955855 tttttgtatttttagtagagacggggtttcaccatgttggccaggatggtcttgaactcctgattt--cgtgatccacccgccttggcctctcaaagtgctgggattagaggcgtgagccactgcacccggT-------------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258255 132 + 53671032 tttttgtatttttagtagagatggggtttcatcatgttggccaggctggtctcgaattcctgacctcaagtgatccacctgcctcagcctcccaaagtgctgggattacaggcgtgagctaccgcacctggT-------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712165 132 + 59248254 tttttgtatttttagtagagatggggtttcatcatgttggccaggctggtctcgaattcctgacctcaagtgatccacctgcctcagcctcccaaagtgctgggattacaggcgtgagctaccgcacctggT-------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584834 127 - 13342542 tttttgta-ttttagtaagagcggg--tttatcatgttggccaggctggtcttgaattcctgacctcaagtgatccacctgcctcagcc-cccaaagtgctgggattacaggtgtgagctaccgcacc-GGT-------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508713 130 + 7714307 tttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatttccttacct--ggtgatccgcctgcctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcccagt-------------- i cerAty1.NW_012005268v1 I 94 I 24 s chlSab2.chr6 29309245 130 + 50890351 tttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatttccttacct--ggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtaagccactgcgcccagt-------------- i chlSab2.chr6 I 1 I 23 s manLeu1.NW_012102454v1 944973 130 - 2385121 tttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatttccttacct--ggtgatccgcccgcctcggcctcccaaagtgctgggattacaggtgtgaaccactgcgcccagt-------------- i manLeu1.NW_012102454v1 M 720 I 23 s colAng1.NW_012111697v1 2388319 130 + 4274983 ttttcgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatttccttacct--ggtgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccagt-------------- i colAng1.NW_012111697v1 I 678 I 23 s otoGar3.GL873654 5524522 132 + 5549422 ---------tttt--cagagacagagtcttgc--tcttgctcaggttggtcttgtattcctgagcttaggtagtccacctgcctcaccctcccaga-tgctagcattacagacatgagccaccacacccACTCTTAAAATTGCAGG i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e micMur3.chr22 3993350 22 - 30143674 I e dasNov3.JH563638 389633 3 + 643850 I e mm10.chr7 111137038 1247 - 145441459 I e canFam3.chr1 4652922 244 - 122678785 I e aotNan1.NW_018505377v1 402614 70 - 4471408 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e saiBol1.JH378197 5448035 13 + 8899380 I e calJac3.chr22 28599344 0 + 49145316 C a score=16836.000000 s hg38.chr19_GL383574v1_alt 122984 6 + 155864 GCTTTG s panTro5.chr19 36190606 6 + 61309027 GCTTTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934835 6 + 64411610 GCTTTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346546 6 - 8369475 GCTTTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943740 6 - 106955855 GCTTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258387 6 + 53671032 GCTTTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712297 6 + 59248254 GCTTTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584961 6 - 13342542 GCTTTG i macNem1.NW_012011689v1 C 0 C 0 s otoGar3.GL873654 5524654 4 + 5549422 --TTTT i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e micMur3.chr22 3993350 22 - 30143674 I e dasNov3.JH563638 389633 3 + 643850 I e mm10.chr7 111137038 1247 - 145441459 I e chlSab2.chr6 29309375 23 + 50890351 I e canFam3.chr1 4652922 244 - 122678785 I e aotNan1.NW_018505377v1 402614 70 - 4471408 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e saiBol1.JH378197 5448035 13 + 8899380 I e calJac3.chr22 28599344 0 + 49145316 C e colAng1.NW_012111697v1 2388449 23 + 4274983 I e manLeu1.NW_012102454v1 945103 23 - 2385121 I e cerAty1.NW_012005268v1 5508843 24 + 7714307 I a score=5591.000000 s hg38.chr19_GL383574v1_alt 122990 3 + 155864 TGT s panTro5.chr19 36190612 3 + 61309027 TGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934841 3 + 64411610 TGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346552 3 - 8369475 TGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943746 3 - 106955855 TGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258393 3 + 53671032 TGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712303 3 + 59248254 TGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584967 3 - 13342542 TGC i macNem1.NW_012011689v1 C 0 C 0 s otoGar3.GL873654 5524658 3 + 5549422 TAT i otoGar3.GL873654 C 0 I 2 s dasNov3.JH563638 389636 3 + 643850 TGA i dasNov3.JH563638 I 3 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e micMur3.chr22 3993350 22 - 30143674 I e mm10.chr7 111137038 1247 - 145441459 I e chlSab2.chr6 29309375 23 + 50890351 I e canFam3.chr1 4652922 244 - 122678785 I e aotNan1.NW_018505377v1 402614 70 - 4471408 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e saiBol1.JH378197 5448035 13 + 8899380 I e calJac3.chr22 28599344 0 + 49145316 C e colAng1.NW_012111697v1 2388449 23 + 4274983 I e manLeu1.NW_012102454v1 945103 23 - 2385121 I e cerAty1.NW_012005268v1 5508843 24 + 7714307 I a score=13935.000000 s hg38.chr19_GL383574v1_alt 122993 7 + 155864 TT-----TTTTT- s panTro5.chr19 36190615 7 + 61309027 TT-----TTTTT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934844 7 + 64411610 TT-----TTTTT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346555 7 - 8369475 TT-----TTTTT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943749 12 - 106955855 TTaaaaaaaaaa- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258396 7 + 53671032 tt-----ttttt- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712306 7 + 59248254 tt-----ttttt- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4584970 7 - 13342542 tt-----ttttt- i macNem1.NW_012011689v1 C 0 C 0 s calJac3.chr22 28599344 7 + 49145316 TT-----TTTTT- i calJac3.chr22 C 0 C 0 s otoGar3.GL873654 5524663 7 + 5549422 CT-----TTATT- i otoGar3.GL873654 I 2 I 293 s canFam3.chr1 4653166 7 - 122678785 TT-----TTCTT- i canFam3.chr1 I 244 I 3 s dasNov3.JH563638 389639 7 + 643850 -T-----TTTTTA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e micMur3.chr22 3993350 22 - 30143674 I e mm10.chr7 111137038 1247 - 145441459 I e chlSab2.chr6 29309375 23 + 50890351 I e aotNan1.NW_018505377v1 402614 70 - 4471408 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e saiBol1.JH378197 5448035 13 + 8899380 I e colAng1.NW_012111697v1 2388449 23 + 4274983 I e manLeu1.NW_012102454v1 945103 23 - 2385121 I e cerAty1.NW_012005268v1 5508843 24 + 7714307 I a score=-12089.000000 s hg38.chr19_GL383574v1_alt 123000 5 + 155864 -TTTTT s panTro5.chr19 36190622 5 + 61309027 -TAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934851 5 + 64411610 -TAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346562 5 - 8369475 -TAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943761 5 - 106955855 -aaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258403 5 + 53671032 -ttttt i rheMac8.chr19 C 0 I 304 s macFas5.chr19 34712313 5 + 59248254 -ttttt i macFas5.chr19 C 0 I 303 s macNem1.NW_012011689v1 4584977 5 - 13342542 -ttttt i macNem1.NW_012011689v1 C 0 I 307 s calJac3.chr22 28599351 5 + 49145316 -TTTGA i calJac3.chr22 C 0 C 0 s otoGar3.GL873654 5524963 5 + 5549422 -ttttt i otoGar3.GL873654 I 293 C 0 s canFam3.chr1 4653176 2 - 122678785 -TC--- i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 389646 5 + 643850 GTTTT- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e micMur3.chr22 3993350 22 - 30143674 I e mm10.chr7 111137038 1247 - 145441459 I e chlSab2.chr6 29309375 23 + 50890351 I e aotNan1.NW_018505377v1 402614 70 - 4471408 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e saiBol1.JH378197 5448035 13 + 8899380 I e colAng1.NW_012111697v1 2388449 23 + 4274983 I e manLeu1.NW_012102454v1 945103 23 - 2385121 I e cerAty1.NW_012005268v1 5508843 24 + 7714307 I a score=16687.000000 s hg38.chr19_GL383574v1_alt 123005 3 + 155864 AAA s panTro5.chr19 36190627 3 + 61309027 AAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934856 3 + 64411610 AAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346567 3 - 8369475 AAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943766 3 - 106955855 aaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258712 3 + 53671032 AAA i rheMac8.chr19 I 304 C 0 s macFas5.chr19 34712621 3 + 59248254 AAA i macFas5.chr19 I 303 C 0 s macNem1.NW_012011689v1 4585289 3 - 13342542 AAA i macNem1.NW_012011689v1 I 307 C 0 s calJac3.chr22 28599356 3 + 49145316 AAA i calJac3.chr22 C 0 I 6 s otoGar3.GL873654 5524968 3 + 5549422 aaa i otoGar3.GL873654 C 0 I 6 s canFam3.chr1 4653178 2 - 122678785 -AA i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 389651 3 + 643850 AAA i dasNov3.JH563638 C 0 I 6 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e micMur3.chr22 3993350 22 - 30143674 I e mm10.chr7 111137038 1247 - 145441459 I e chlSab2.chr6 29309375 23 + 50890351 I e aotNan1.NW_018505377v1 402614 70 - 4471408 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e saiBol1.JH378197 5448035 13 + 8899380 I e colAng1.NW_012111697v1 2388449 23 + 4274983 I e manLeu1.NW_012102454v1 945103 23 - 2385121 I e cerAty1.NW_012005268v1 5508843 24 + 7714307 I a score=13405.000000 s hg38.chr19_GL383574v1_alt 123008 2 + 155864 TC s panTro5.chr19 36190630 2 + 61309027 TC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934859 2 + 64411610 TC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346570 2 - 8369475 TC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943769 2 - 106955855 TC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258715 2 + 53671032 TT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712624 2 + 59248254 TT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585292 2 - 13342542 TT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508867 2 + 7714307 TT i cerAty1.NW_012005268v1 I 24 C 0 s chlSab2.chr6 29309398 2 + 50890351 TT i chlSab2.chr6 I 23 C 0 s manLeu1.NW_012102454v1 945126 2 - 2385121 TT i manLeu1.NW_012102454v1 I 23 C 0 s colAng1.NW_012111697v1 2388472 2 + 4274983 TT i colAng1.NW_012111697v1 I 23 C 0 s calJac3.chr22 28599365 2 + 49145316 TT i calJac3.chr22 I 6 C 0 s otoGar3.GL873654 5524977 2 + 5549422 tt i otoGar3.GL873654 I 6 C 0 s canFam3.chr1 4653181 1 - 122678785 -T i canFam3.chr1 I 1 I 1 s dasNov3.JH563638 389660 2 + 643850 TT i dasNov3.JH563638 I 6 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e micMur3.chr22 3993350 22 - 30143674 I e mm10.chr7 111137038 1247 - 145441459 I e aotNan1.NW_018505377v1 402614 70 - 4471408 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I e saiBol1.JH378197 5448035 13 + 8899380 I a score=106518.000000 s hg38.chr19_GL383574v1_alt 123010 10 + 155864 TACTTAGAAA s panTro5.chr19 36190632 10 + 61309027 TACTTAGAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934861 10 + 64411610 TACTTAGAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346572 6 - 8369475 TACTT----A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943771 10 - 106955855 TACTTAGAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258717 10 + 53671032 TACTTAGAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712626 10 + 59248254 TACTTAGAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585294 10 - 13342542 TACTTAGAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508869 10 + 7714307 TACTTAGAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309400 10 + 50890351 TACTTAGAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945128 10 - 2385121 TACTTAGAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2388474 10 + 4274983 TACTTAGAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599367 10 + 49145316 TACTTAGAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448048 10 + 8899380 TACTTAGAAA i saiBol1.JH378197 I 13 C 0 s aotNan1.NW_018505377v1 402684 10 - 4471408 TACTTAGAAA i aotNan1.NW_018505377v1 I 70 C 0 s otoGar3.GL873654 5524979 10 + 5549422 tacttaaaaa i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4653183 10 - 122678785 CAGTTAAAAA i canFam3.chr1 I 1 I 7 s dasNov3.JH563638 389662 9 + 643850 TACTTAAAA- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 609695 109 + 2501019 I e micMur3.chr22 3993350 22 - 30143674 I e mm10.chr7 111137038 1247 - 145441459 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I a score=905924.000000 s hg38.chr19_GL383574v1_alt 123020 69 + 155864 TAAATTATTTT------CACCCCCTGATTTACACTTGAATTTCCACTAGCAACACAATTTGTTGTCACAAATGTT s panTro5.chr19 36190642 69 + 61309027 TAAATTATTTT------CACTCCCTGATTTACACTTGAATTTCCACCAGCAACACAATTTGTTGTCACAAATGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934871 69 + 64411610 TAAATTATTTT------CACTCCCTGATTTACACTTGAATTTCCACCAGCAACACAATTTGTTGTCACAGATGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346578 69 - 8369475 TAAATTATTTT------CACTCCCTGATTTACACTTCAATTTCCACCAGCAACACAATTTGTTGTCACAAATGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943781 69 - 106955855 TAAATTGTTTG------CACTCCCTGATTTACACTTGAATTTCTACCAGCAACACAATTTGTTGTCACAAATGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258727 65 + 53671032 TAAATTATTTT------CATTCCCTGATTTACATTTGAATTTCCACCAACAACACAATTTGTTGTC----ATGTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712636 65 + 59248254 TAAATTATTTT------CATTCCCTGATTTACATTTGAATTTCCACCAGCAACACAATTTGTTGTC----ATGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585304 65 - 13342542 TAAATTATTTT------CATTCCCTGATTTACATTTGAATTTCCACCAGCAACACAATTTGTTGTC----ATGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508879 65 + 7714307 TAAATTATTTT------CACTCCCTGATTTACATTTGAATTTCCACCAGCAACACAATTTGTTGTC----ATGTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309410 65 + 50890351 TAAATTATTTT------CACTCCCTGATTTACATTTGAATTTCCACCAGCAACACAATTTGTTGTC----ATGTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945138 65 - 2385121 TAAATTATTTT------CACTCCCTGATTTACATTTGAATTTCCACCAGCAACACAGTTTGTTGTC----ATGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2388484 65 + 4274983 TAAATTATTTT------CACTCCCTGATTTACATTTGAATTTCCACCAGCAACACAATTTGTTGTC----ATGTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599377 69 + 49145316 TAAATTATTTT------CACTCTCTGATTTACACTTGAATTTCTACCACCAGCACAATTTGTTGTCCGAAATGTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448058 69 + 8899380 TAAATTATTTT------CACTCCCTGATTTACACTTGAATTTCTACCACCAGCACAGTTTGTTGTCGCAAGTCTT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402694 69 - 4471408 TAAATTATTTT------CACTCCCTGATTTACACTTGAATTTCTACCACCAGCACAATTTGTTGTCGCAAATGTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3993372 69 - 30143674 TAAGTTATTCT------CATTCCCTGATTTACACTTGAATTTCCATCAGCAGCACAATTTGTTTTCACAAATGTT i micMur3.chr22 I 22 C 0 s proCoq1.NW_012149263v1 609804 69 + 2501019 TAAGTTATTCT------CATTCCCTGATTTACACTTGAATTTCCATCAGCAGCACAATTTGTTGTCATGAATGTT i proCoq1.NW_012149263v1 I 109 I 281 s otoGar3.GL873654 5524989 69 + 5549422 tCAATGATTTT------CATTCCCTCATTTATACTTGAATTTCCATCAGTAGCACAATTTGTTGTTGAGAATATT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4653200 75 - 122678785 AGATTTACTTTAAGTCATACTCCTTGATTTATACCCAAATTTCCATCAGTGGCACAATTTGCAGTTGTGAATGTT i canFam3.chr1 I 7 C 0 s dasNov3.JH563638 389671 68 + 643850 GAAGTTATTCT------CATTCCCTGATTTACCCTTGAATTCGTATCAACAGCACATTTTGTTGTTGCA-ATATT i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111137038 1247 - 145441459 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I a score=558240.000000 s hg38.chr19_GL383574v1_alt 123089 47 + 155864 TTCATAGTACTTGGGCAC-----------------------------------ATTTGATG---CAGAAATTTTTAATGGTCCAA s panTro5.chr19 36190711 47 + 61309027 TTCATAGTACTTGGGCAC-----------------------------------ATTTGATG---CAGAAATTTTTAATGGTCCAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934940 47 + 64411610 TTCATAGTACTTGGGCAC-----------------------------------ATTTGATG---CAGAAATTTTTAATGGTCCAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346647 47 - 8369475 TTCATAGTACTTGGGCAC-----------------------------------ATTTGATG---CAGAAATTTTTAATGGTCCAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943850 47 - 106955855 TTCATAGTACTTGGGCAC-----------------------------------ATTTGATG---CAGAAATTTTTAATGGTCCAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258792 47 + 53671032 TTCATAGTACTTGGGAAC-----------------------------------ATTTGATG---CAGAAATTTTTAATGGTCCAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712701 47 + 59248254 TTCATAGTACTTGGGAAC-----------------------------------ATTTGATG---CAGAAATTTTTAATGGTCCAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585369 47 - 13342542 TTCATAGTACTTGGGAAC-----------------------------------ATTTGATG---CAGAAATTTTTAATGGTCCAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508944 47 + 7714307 TTCATAGTACTTGGGAAC-----------------------------------ATTTGATG---CAGAAATTTTTAATGGTCCAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309475 47 + 50890351 TTCATAGTACTTGGGAAC-----------------------------------ATTTGATG---CAGAAATTTTTAATGGTCCAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945203 47 - 2385121 TTCATAGTACTTGGGAAC-----------------------------------ATTTGATG---CAGAAATTTTTAATGGTCCAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2388549 47 + 4274983 TTCATAGTACTTGGGAAC-----------------------------------GTTTGATG---CAGAAATTTTTAATGGTCCAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599446 47 + 49145316 TTCTTAGTACTTGGGCAC-----------------------------------ATTTGATG---CAGAAATTTTTAATGGTCCAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448127 47 + 8899380 TTCATAGTACTTGGGCAC-----------------------------------ATTTGATG---CAGAAATTTTTAATGGTCCAA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402763 47 - 4471408 TTCATAGTACTTGGGCAC-----------------------------------ATTTGATG---CAGAAATTTTTAATGGTCCAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3993441 47 - 30143674 TTCCTAGTTCTTGAGTAC-----------------------------------ATTTGTTG---TGAAAATTTTTAATGGTCCAG i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5525058 85 + 5549422 TTTGTAGTACTTGCATACTTGTACAAGTACTACAGAAATATTCACAACAATAAATTTCATGACATTAAAATTATTAATGGTCCAG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4653275 36 - 122678785 TTCTTCGTGCTCTGTTGT-----------------------------------ATTGGATG---CAAAAATTTT----------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389739 47 + 643850 TTCATGGTGCTTGGGTGC-----------------------------------AACTGATG---TGAAAATTTTTAATGATACAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 609873 281 + 2501019 I e mm10.chr7 111137038 1247 - 145441459 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I a score=124470.000000 s hg38.chr19_GL383574v1_alt 123136 10 + 155864 GACTATTTTA s panTro5.chr19 36190758 10 + 61309027 GACTATTTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934987 10 + 64411610 GACTATTTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346694 10 - 8369475 GACTATTTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943897 10 - 106955855 TACTATTTTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258839 10 + 53671032 GAGTATTTTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712748 10 + 59248254 GAGTATTTTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585416 10 - 13342542 GAGTATTTTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5508991 10 + 7714307 GAGTATTTTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309522 10 + 50890351 GAGTATTTTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945250 10 - 2385121 GAGTATTTTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2388596 10 + 4274983 GAGTATTTTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599493 10 + 49145316 GACTATTTTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448174 10 + 8899380 GACTATTTTA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402810 10 - 4471408 GACTATTTTA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3993488 10 - 30143674 GACCATTTTA i micMur3.chr22 C 0 I 189 s proCoq1.NW_012149263v1 610154 10 + 2501019 GACCATTTTA i proCoq1.NW_012149263v1 I 281 C 0 s otoGar3.GL873654 5525143 10 + 5549422 AACTATTTTA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4653311 1 - 122678785 ---------A i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389786 10 + 643850 GACCATTTTA i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111137038 1247 - 145441459 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I a score=457004.000000 s hg38.chr19_GL383574v1_alt 123146 43 + 155864 GTTGATAGATGAAACCTTCC--TTTTACCTGAACAAACTTTTTCG s panTro5.chr19 36190768 43 + 61309027 GTTGATAGATGAAACCTTCA--TTTTACCTGAACAAACTTTTTCG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39934997 43 + 64411610 GTTGATAGACGAAACCTTCA--TTTTACCTGAACAAACTTTTTCG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346704 43 - 8369475 GTTGATAGATGAAACCTTCA--TTTTACCTGAACAAACTTTTTCG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943907 43 - 106955855 GTTGATAGATGAAACCTTCA--TTTTACCTGAGCAAACTTTTTGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258849 43 + 53671032 GTAAATAGATGAAACCTTCA--TTTTACCTGAAAAAACTTTTTCG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712758 43 + 59248254 GTAAATAGATGAAACCTTCA--TTTTACCTGAAAAAACTTTTTCG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585426 43 - 13342542 GTAAATAGATGAAACCTTCA--TTTTACCTGAAAAAACTTTTTCG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5509001 43 + 7714307 GTAAATAGATGAAACCTTCA--TTTTACCTGAAAAAACTTTTTCG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309532 43 + 50890351 GTAAGTAGATGAAACCTTCA--TTTTACCTGAAAAAACTTTTTCG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945260 43 - 2385121 GTAAATAGATGAAACCTTCA--TTTTACCTGAAAAAACTTTTTCG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2388606 42 + 4274983 GTTAATAGATGAAACCTTCA--TTTTACCTG-AAAAACTTTTTCG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599503 41 + 49145316 GTTCATAGATGAAACCTTCG--TTTTACGTGAACAAAC--TGTCG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448184 43 + 8899380 GTTAATAGACGAAACCTTCA--TTTTACCTCAACAAACTTTTTCG i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402820 43 - 4471408 GTTAATAGACGAAACCTTCA--TTTTACCTGAACAAACTTTTTCG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 610164 45 + 2501019 GTTTATACATAAAACCTTCGTTTTTTACTTGAACAAATTTGTTTT i proCoq1.NW_012149263v1 C 0 I 1 s otoGar3.GL873654 5525153 43 + 5549422 GGTTATAGATACAACCTTTG--TTTTACCCGAACAAGTTTCTTTA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4653312 43 - 122678785 GCTTATCAATAAAAACCTGG--TTTTAGCTGAGCAAACTTTTTCA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389796 41 + 643850 GTCTATCA--TAAAATTTTG--CTTTACTTGAGCAAACTTTTTCA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3993498 189 - 30143674 I e mm10.chr7 111137038 1247 - 145441459 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I a score=111145.000000 s hg38.chr19_GL383574v1_alt 123189 7 + 155864 GAAGTTT s panTro5.chr19 36190811 7 + 61309027 GAAGTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935040 7 + 64411610 GAAGTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346747 7 - 8369475 GAAGTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943950 7 - 106955855 GAAGTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258892 7 + 53671032 GAAGTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712801 7 + 59248254 GAAGTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585469 7 - 13342542 GAAGTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5509044 7 + 7714307 GAAGTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309575 7 + 50890351 GAAGTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945303 7 - 2385121 GAAGTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2388648 7 + 4274983 GAAGTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599544 7 + 49145316 GAAGTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448227 7 + 8899380 GAAGTTT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402863 7 - 4471408 GAAGTTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3993687 7 - 30143674 GAAGTTT i micMur3.chr22 I 189 C 0 s proCoq1.NW_012149263v1 610210 7 + 2501019 GAAGTTT i proCoq1.NW_012149263v1 I 1 C 0 s otoGar3.GL873654 5525196 7 + 5549422 TAAGTCt i otoGar3.GL873654 C 0 I 283 s canFam3.chr1 4653355 7 - 122678785 GAAATTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389837 7 + 643850 AAAGTCT i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111137038 1247 - 145441459 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I a score=1142422.000000 s hg38.chr19_GL383574v1_alt 123196 83 + 155864 AGGAGCCAGCTTTGTTCATCCTTTGGTGATAGGTGGTGGTTTGTATGTGTTTGTAGACAAAACTTTCCTTGGCGGGGATT---------------------------------TGC-------- s panTro5.chr19 36190818 83 + 61309027 AGGAGCCAGCTTTGTTCATCCTTTGGTGATAGGTGGTGGTTTGTATGTGTTTGTAGACAAAACTTTCCTTGGCGGGGATT---------------------------------TGC-------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935047 83 + 64411610 AGGAGCCAGCTTTGTTCATCCTTTGGTGATAGGTGGTGGTTTGTATGTGTTTGTAGACAAAACTTTCCTTGGCGGGGATT---------------------------------TGC-------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346754 83 - 8369475 AGGAGCCAGCTTTGTTCATCCTTTGGTGATAGGTGGTGGTTTGTATGTGTTTGTAGACAAAAGTTTCCTTGGCGGGGATT---------------------------------TGC-------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63943957 83 - 106955855 AGGAGCCAGCTTTGTTCATCCTTTGGTGATAGGTGGTGGTTTGTATGTGTTTGTAGACAAAACTTTTCTTGGCAGGGATT---------------------------------TGC-------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258899 83 + 53671032 AGGAGCCAGCTTTGTTCATCCTTTGGTGATGGGTGGTGATTTGTATGTGTTTGTAGACAAAACTTTCCTTGGCGGGGATT---------------------------------TGC-------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712808 83 + 59248254 AGGAGCCAGCTTTGTTCATCCTTTGGTGATGGGTGGTGGTTTGTATGTGTTTGTAGACAAAACTTTCCTTGGCGGGGATT---------------------------------TGC-------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585476 83 - 13342542 AGGAGCCAGCTTTATTCATCCTTTGGTGATGGGTGGTAGTTTGTATGTGTTTGTAGACAAAACTTTCCTTGGCGGGGATT---------------------------------TGC-------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5509051 83 + 7714307 AGGAGCCAGCTTTGTTCATCCTTTGGTGATGGGTGGTGGTTCGTATGTGTTTGTAGACAAAACTTTCTTTGGCGGGGATT---------------------------------TGC-------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309582 83 + 50890351 AGGAGCCAGCTTTGTTCATCCTTTGGTGATGGGTGGTGGTTTGTATGTGTTTGTAGACAAAACTTTCCTTGGCGGGGATT---------------------------------TGC-------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945310 83 - 2385121 AGGAGCCAGCTTTGTTCATCCTTTGGTGATGGGTGGTGGTTTGTATGTGTTTGTAGACAAAACTTTCCTTGGCGGGGATT---------------------------------TGC-------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2388655 83 + 4274983 AGGAGCCAGCTTTGTTCATCCTTTGGTGATGGGTGGTGGTTTGTATGTGTTTGTAGACAAAACTTTCCTTGGCGGGGATT---------------------------------TGC-------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599551 116 + 49145316 AGGAGCCAGCTTTGTACATCCTTTGGTGATGGGTGGTGGTTTGTATGTGTTTGTAGACAAAACTTTCCTTGGCAGGGATTTGCTCCTTTTTTTTTTTTTTTTCCCCCCTGCCCTGC-------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448234 83 + 8899380 AGGAGCCAGCTTTGTTCATCCTTTGGTGTTGGGTGGTGGTTTGTATGTGTTTGCAGACAAAACTTTCCTTGGCAGGGATT---------------------------------TGC-------- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402870 83 - 4471408 AGGAGCCAGCTTTGTTCATCCTTTGGTGATGGGTGGTGGTTTGTATGTGTTTGTAGATAAAACTTTCCTTGGCGGGGATT---------------------------------TGT-------- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3993694 83 - 30143674 AAGAGCCAACTTTGTTCATCTTTTGGTGATGTGTGATAGTTTGTGTGTGATTGTAGACAAAACTTTTCTTGGCAAGGATT---------------------------------TGC-------- i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 610217 83 + 2501019 AGGAGCCAACTTTGTTCATCTTTTGGTGATGTGTGGTAGTTTGTGTGTGATTATAGACAAAACTTTTCTTGGCAAGGATT---------------------------------TGC-------- i proCoq1.NW_012149263v1 C 0 I 22 s otoGar3.GL873654 5525486 83 + 5549422 AAGAGCCAACTTTGTTCATTTTCTGGTGATGTGTTGTGGTTTCTGTGTGCTTGTGGACAAAACTTTTCTTGGCAAAGATT---------------------------------TGC-------- i otoGar3.GL873654 I 283 C 0 s canFam3.chr1 4653362 69 - 122678785 CAGAGCCAACTTT----ATCCTTTGGAGATTTGTGGT----------TATTTGTACATAAACCTTTTCTTGGCGAAGCTT---------------------------------TGA-------- i canFam3.chr1 C 0 I 6 s dasNov3.JH563638 389844 76 + 643850 GAGAGC---------TCACCCTTTGGTGATATGTAGTTA-----GGGTGTTTGTTGACAAAACCTTTCTTGGCAGGG-CT---------------------------------TGCTTTTTTCC i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111137038 1247 - 145441459 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I a score=-8476.000000 s hg38.chr19_GL383574v1_alt 123279 9 + 155864 CC---CTT---TTTT s panTro5.chr19 36190901 9 + 61309027 CC---CTT---TTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935130 9 + 64411610 CC---CTT---TTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346837 9 - 8369475 CC---CTT---TTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944040 8 - 106955855 CC---CCT---TTT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258982 10 + 53671032 CC---CTTT--TTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712891 10 + 59248254 CC---CTTT--TTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585559 10 - 13342542 CC---CTTT--TTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5509134 11 + 7714307 CCT--TTTT--TTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309665 9 + 50890351 CC---TTT---TTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945393 12 - 2385121 CC---TTTTTGTTGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2388738 10 + 4274983 CC---CTTT--TTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599667 8 + 49145316 TC---CTT---TTT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448317 8 + 8899380 TC---CTT---TTT- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402953 8 - 4471408 TC---CTT---TTT- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3993777 9 - 30143674 --tttttt---ttt- i micMur3.chr22 C 0 I 22 s otoGar3.GL873654 5525569 6 + 5549422 -----TTA---TTT- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4653437 3 - 122678785 CC---C--------- i canFam3.chr1 I 6 C 0 s dasNov3.JH563638 389920 9 + 643850 CC---CTTC--TTT- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 610300 22 + 2501019 I e mm10.chr7 111137038 1247 - 145441459 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I a score=159682.000000 s hg38.chr19_GL383574v1_alt 123288 26 + 155864 --------------------------------------------------------------------------CGTTGTTTCTTCTTCCTTT-----------------------------GAAGATC------------------------------- s panTro5.chr19 36190910 26 + 61309027 --------------------------------------------------------------------------TGTTGTTTCTTCTTCCTTT-----------------------------GAAGATC------------------------------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935139 26 + 64411610 --------------------------------------------------------------------------TGTTGTTTCTTCTTCCTTT-----------------------------GAAGATC------------------------------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346846 26 - 8369475 --------------------------------------------------------------------------TGTTGTTTCTTCTTCCTTT-----------------------------GAAGATC------------------------------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944048 24 - 106955855 ----------------------------------------------------------------------------TTGTTTCTTCTTCCTTT-----------------------------GAAGATC------------------------------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30258992 26 + 53671032 --------------------------------------------------------------------------TGTTGTTTCTTCTTTCTTT-----------------------------GAAGGTC------------------------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712901 26 + 59248254 --------------------------------------------------------------------------TGTTGTTTCTTCTTTCTTT-----------------------------GAAGGTC------------------------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585569 26 - 13342542 --------------------------------------------------------------------------TGTTGTTTCTTCTTTCTTT-----------------------------GAAGGTC------------------------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5509145 26 + 7714307 --------------------------------------------------------------------------TGTTGTTTCTTCTTTCTTT-----------------------------GAAGGTC------------------------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309674 26 + 50890351 --------------------------------------------------------------------------TGTTGTTTCTTTTTTCTTT-----------------------------GAAGGTC------------------------------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945405 26 - 2385121 --------------------------------------------------------------------------TGTTGTTTCTTCTTTCTTT-----------------------------GAAGGTC------------------------------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2388748 26 + 4274983 --------------------------------------------------------------------------TGTTGTTTCTTCTTTCTTT-----------------------------GAAGGTC------------------------------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599675 24 + 49145316 ----------------------------------------------------------------------------TTGTTTCTTCTTCCTTT-----------------------------GAAGATT------------------------------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448325 24 + 8899380 ----------------------------------------------------------------------------TTGTTTCTTCTTCCTTT-----------------------------GAAGATC------------------------------- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402961 24 - 4471408 ----------------------------------------------------------------------------TTGTTTCTTCTTTCTTT-----------------------------GAAGATC------------------------------- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5525575 17 + 5549422 -----------------------------------------------------------------------------------TTCTTTCCTT-----------------------------GAAAATC------------------------------- i otoGar3.GL873654 C 0 I 1 s canFam3.chr1 4653440 22 - 122678785 ------------------------------------------------------------------------------CCTGCTTTTCCTTTT-----------------------------GAAGATT------------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 389929 160 + 643850 TCAAAGTCTATTTAACAAGGAATTTTTTTGGAGGGGGCAAGGATGGGGGATGCTCTTTCAAAAGTTCTAACACAAGTTTTTTTTTCTCacttttttttattggagcaattgtaggtttacagaaaaatcatgcatgaagtagagttcacatataaagttt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 610300 22 + 2501019 I e micMur3.chr22 3993786 22 - 30143674 I e mm10.chr7 111137038 1247 - 145441459 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I a score=97468.000000 s hg38.chr19_GL383574v1_alt 123314 7 + 155864 TCTGTTT s panTro5.chr19 36190936 7 + 61309027 TCTGTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935165 7 + 64411610 TCTGTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346872 7 - 8369475 TCTGTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944072 7 - 106955855 TCTGTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259018 7 + 53671032 TCTGTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712927 7 + 59248254 TCTGTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585595 7 - 13342542 TCTGTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5509171 7 + 7714307 TCTGTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309700 7 + 50890351 TCTGTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945431 7 - 2385121 TCTGTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2388774 7 + 4274983 TCTGTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599699 7 + 49145316 TCTGTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448349 7 + 8899380 TCTTTTT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402985 7 - 4471408 TCTGTTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3993808 7 - 30143674 TCTGTTT i micMur3.chr22 I 22 C 0 s proCoq1.NW_012149263v1 610322 7 + 2501019 TCTGTTT i proCoq1.NW_012149263v1 I 22 C 0 s otoGar3.GL873654 5525593 6 + 5549422 Tttttt- i otoGar3.GL873654 I 1 I 2749 s canFam3.chr1 4653462 7 - 122678785 TCTGTTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 390089 7 + 643850 tccatct i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111137038 1247 - 145441459 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I a score=648030.000000 s hg38.chr19_GL383574v1_alt 123321 79 + 155864 AACAAAGA--TTTTTTTTTTG---GCTC------------------------ACAGTGTTCCTGTA--------ATAGAATT------------------------------------------------------------------------------------------CCTTCAAGAGT--------TCTAATACTA----------GTTTTG-------TTTTGTT s panTro5.chr19 36190943 79 + 61309027 AACAAAGA--TTTTTTTTTTG---GCTC------------------------ACAGTGTTCCTGTA--------ATAGAATT------------------------------------------------------------------------------------------CCTTCAAGAGT--------TCTAATACTA----------GTTTTG-------TTTTGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935172 78 + 64411610 AACAAAGA---TTTTTTTTTG---GCTC------------------------ACAGTGTTCCTGTA--------ATAGAATT------------------------------------------------------------------------------------------CCTTCAAGAGT--------TCTAATACTA----------GTTTTG-------TTTTGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346879 80 - 8369475 AACAAAGA-TTTTTTTTTTTG---GCTC------------------------ACAGTGTTCCTGTA--------ATAGAATT------------------------------------------------------------------------------------------CTTTCAAGAGT--------TCTAATACTA----------GTTTTG-------TTTTGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944079 88 - 106955855 AACAAAGA---TTTTTTTTTG---GCTC------------------------ACAGTGTTCCTCTA--------ATAGAATT------------------------------------------------------------------------------------------CCTTCAAGAAT--------TCTAATACTAgttttgttttgttttg-------ttttgtt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259025 82 + 53671032 AACAAAGA----TTTTTTTTG---GCTC------------------------ACAGTGTTCCTCTA--------ATAGAATT------------------------------------------------------------------------------------------CCTTCAAGAGT--------TCTAATACTAGTTTT-----GTTTTG-------CTTTGTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34712934 82 + 59248254 AACAAAGA----TTTTTTTTG---GCTC------------------------ACAGTGTTCCTCTA--------ATAGAATT------------------------------------------------------------------------------------------CCTTCAAGAGT--------TCTAATACTAGTTTT-----GTTTTG-------CTTTGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585602 82 - 13342542 AACAAAGA----TTTTTTTTG---GCTC------------------------ACAGTGTTCCTCTA--------ATAGAATT------------------------------------------------------------------------------------------CCTTCAAGAGT--------TCTAATACTAGTTTT-----GTTTTG-------CTTTGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5509178 81 + 7714307 AACAAAG-----TTTTTTTTG---GCTC------------------------ACAGTGTTCCTCTA--------ATAGAATT------------------------------------------------------------------------------------------CCTTCAAGAGT--------TCTAATACTAGTTTT-----GTTTTG-------TTTTGTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309707 81 + 50890351 AACAAAGA-----TTTTTTTG---GCTC------------------------ACAGTGTTCCTCTA--------ATAGAATT------------------------------------------------------------------------------------------CCTTGAAGAGT--------TCTAATACTAGTTTT-----GTTTTG-------TTTTGTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945438 82 - 2385121 AACAAAGA----TTTTTTTTG---GCTC------------------------ACAGTGTTCCTCTA--------ATAGAATT------------------------------------------------------------------------------------------CCTTCAAGAGT--------TCTAATACTAGTTTT-----GTTTTG-------TTTTGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2388781 73 + 4274983 AACAAAGA---TTTTTTTTTG---GCTC------------------------ACAGTGTTCCTCTA--------ATAGAATT------------------------------------------------------------------------------------------CCTTCAAGAGT--------TCTAATACTAGT----------------------TTTGTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599706 91 + 49145316 AACAAAGTTTTTTTTTTTTTTTTGGCTC------------------------ACAGTGTTCCTCTA--------ATAGAATT------------------------------------------------------------------------------------------CCTTCAAGAGT--------TCTAATACTAGTTTT-----GTTTTGT----TTTTTTG-T i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448356 80 + 8899380 AACAAAGTTTTTTTTTTCTTT---GCTT------------------------ATAGTGTTCCTCTA--------ATAGAATT------------------------------------------------------------------------------------------CTTTCAAGAGT--------TCTAATACTAGTTTT-----G------------TTTTG-T i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 402992 83 - 4471408 AACAAA--TTTTTTTTTTTTT---CCTC------------------------ACAGTGTTCCTCTA--------ATAGAATT------------------------------------------------------------------------------------------CCTTCAAGAGT--------TCTAATACTAGTTTT-----GTTTTG-------TTTTG-T i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3993815 74 - 30143674 AACAAAGA-----TTTTTTTG---GCT--------------------------CAGTGTTCCTCCA--------GTAAAATT------------------------------------------------------------------------------------------CTTTCAGAAGT--------TCTAATACTA----------GTTTTG-------TTTTGTT i micMur3.chr22 C 0 I 82 s proCoq1.NW_012149263v1 610329 69 + 2501019 AACAAAGA-----TTTTTTTG---GCT--------------------------CAGTGTTCCTCCG--------GTAAAATT------------------------------------------------------------------------------------------CTTTCAAAAAT--------TCTAATCCTA----------GTTTTG-------TT----- i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4653469 69 - 122678785 --TAATAG-----TTTTTTTG---GCTC------------------------AGAGTGTTCCTCTA--------ATAAAATT------------------------------------------------------------------------------------------ATTTCAGAAGT--------TCTAATACTT----------ATTTTG-------TT----- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 390096 220 + 643850 taccaaca---ttttgcttta---gtgtggtacgtttgttagaattgatgaaacattacttttgtaagtacattattgaatttagtccattgtttaccttagggttaactcttgtgttgtatagttctattatggtagcatatatatagcctaaaaataatcattttttccactttcaggtgtacagctcagctaacattaaTTTT-----TATTTGTGGTGGGTTTTTTT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I a score=584623.000000 s hg38.chr19_GL383574v1_alt 123400 52 + 155864 TTGATGGCAGCAGGTTTTGAGAGTGAG-CTTTTGACTTCATAAGAAGACTAAA s panTro5.chr19 36191022 52 + 61309027 TTGATGGCAGCAGGTTTTGAGAGTGAG-CTTTTGACTTCATAAGAAGACTAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935250 52 + 64411610 TTGATGGCAGCAGGTTTTGAGAGTGAG-CTTTTGACTTCATAAGAAGACTAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6346959 52 - 8369475 TTGATGGCAGCAGGTTTTGAGAGTGAG-CTTTTGACTTCATAAGAAGACTAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944167 49 - 106955855 ttgATGGCAGCAGGTTTTGAGAGTGAG-CTTTTGACTTCAT---AAGACTAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259107 52 + 53671032 TTGATGGCAGCAGGTTCTGAGAATGAG-CTTTTGACTTCATAAGAAGACTAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713016 52 + 59248254 TTGATGGCAGCAGGTTCTGAGAATGAG-CTTTTGACTTCATAAGAAGACTAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585684 52 - 13342542 TTGATGGCAGCAGGTTCTGAGAATGAG-CTTTTGACTTCATAAGAAGACTAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5509259 52 + 7714307 TTGATGGCAGCAGGTTCTGAGAATGAG-TTTTTGACTTCGTAAGAAGACTAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309788 52 + 50890351 TTGATGGCAGCAGGTTCTGAGAATGAG-CTTTTGACTTCATAAGAAGACTAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945520 52 - 2385121 TTGATGGCAGCAGGTTCTGAGAATGAG-CTTTTGACTTCGTAAGAAGACTAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2388854 52 + 4274983 TTGATGGCAGCAGGTTCTGAGAATGAG-CTTTTGACTTCATAAGAAGACTAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599797 52 + 49145316 TTGATGTCAGCAGGTTTTGAGAGAGAG-CTTTTGACTTCATAAGAAGACTAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448436 52 + 8899380 TCGATGGCAGCAGGTTTTGAGAGAGAG-CTTTTGACTTCATAAGAAGACTAAA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 403075 52 - 4471408 TTGATGGCAGCAGGTTTTGAGAGAGAG-CTCTTGACTTCATAAGAAGACTAAA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 610398 53 + 2501019 TCAGCAGCAGCAGGTTTTGAGAGTTAGCCTTTTGACTTCATAAGAGGACTAAA i proCoq1.NW_012149263v1 C 0 I 52 s canFam3.chr1 4653538 47 - 122678785 TTAAAGGCAACAGGTTTTGAG-TTACT-CTTTTGGTTTGAT---AAGATTAA- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 390316 53 + 643850 TTAACGTCAGTATGTTTTGAGAGTTAGTCTTTTGGCTTCATGAGAAGACTAAG i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3993889 82 - 30143674 I e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I a score=404098.000000 s hg38.chr19_GL383574v1_alt 123452 43 + 155864 ACAACAGTCTTAGAGTACAGTTAAGTCCATTTGTTACCAGAAA s panTro5.chr19 36191074 43 + 61309027 ACAACAGTCTTAGAGTACAGTTAAGTCCATTTGTTACCAGAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935302 43 + 64411610 ACAACAGTCTTAGAGTACAGTTAAGTCCATTTGTTACCAGAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347011 43 - 8369475 ACAACAGTCTTAGAGTACAGTTAAGTCCATTTGTTACCAGAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944216 43 - 106955855 ACAACAGTCTTAGAGTACAGTTAAGTCCATTTGTTACCAGAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259159 43 + 53671032 ACAATAGTCTTAGAGTACAGTTAAGTCAATTTATTACCAGAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713068 43 + 59248254 ACAATAGTCTTAGATTACAGTTAAGTCAATTTATTACCAGAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585736 43 - 13342542 ACAATAGTCTTAGAGTACAGTTAAGTCAATTTATTACCAGAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5509311 43 + 7714307 ACAATAGTCTTAGAGTACAGTTAAGTCAATTTATTACCAGAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309840 43 + 50890351 ACAATAGTCTTAGAGTACAGTTAAGTCAATTTATTACCAGAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945572 43 - 2385121 ACAATAGTCTTAGAGTACAGTTAAGTCAATTTATTACCAGAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2388906 43 + 4274983 ACAACAGTCTTAGAGTACAGTTAAGTCAATTTATTACCAGAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599849 43 + 49145316 ACACCAGTTTCAGAGTACACTTCAGTCGATTTATTACCAGAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448488 43 + 8899380 ACAACAGTCTTAGAGTACACTTGAGTCGATTTATTACCAGAAA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 403127 43 - 4471408 ACAACAGTCTTAGAGTACACTTCAGTCGATTTATTACCAGAAA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4653585 30 - 122678785 ACACAAGTCTTAGAACACCATGGG------TTATTA------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 390369 41 + 643850 -TACCAGTCTTACAATAC-GTTAAATTAATTTATTATCAGAAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 610451 52 + 2501019 I e micMur3.chr22 3993889 82 - 30143674 I e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I a score=145760.000000 s hg38.chr19_GL383574v1_alt 123495 16 + 155864 ATCAGACAGACAGCTA s panTro5.chr19 36191117 16 + 61309027 ATCAGACAGACAGCTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935345 16 + 64411610 ATCAGACAGACAGCTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347054 16 - 8369475 ATCAGACAGACAGCTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944259 16 - 106955855 ATCAGACAGACAGCTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259202 16 + 53671032 ATCAGACAGACAGCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713111 16 + 59248254 ATCAGACAGACAGCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585779 16 - 13342542 ATCAGACAGACAGCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5509354 16 + 7714307 ATCAGACAGACAGCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309883 16 + 50890351 ATCAGACAGACAGCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945615 16 - 2385121 ATCAGACAGACAGCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2388949 16 + 4274983 ATCAGACAGACAGCTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599892 12 + 49145316 AT----CAGACATCTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448531 12 + 8899380 AT----CAGACAGCTA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 403170 12 - 4471408 AT----GAGACAGCTA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3993971 16 - 30143674 ATCAGGCAGATAGTGA i micMur3.chr22 I 82 C 0 s canFam3.chr1 4653615 11 - 122678785 -----ACAGATAGCTA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 390410 16 + 643850 ATCAGATAGTTAGCTA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 610451 52 + 2501019 I e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I a score=893059.000000 s hg38.chr19_GL383574v1_alt 123511 73 + 155864 GGTCTGTCCTCATCAGGACCAAGTAATACTGGA------TTTTTTTTTT-TCATTAAATGTTCACTATTTTTCTTTGTAT s panTro5.chr19 36191133 72 + 61309027 GGTCTGTCCTTATCACGACCAAGTAATACTGGA------TTTTTTTTTT--CATTAAATGTTCACTATTTTTCTTTGTAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935361 72 + 64411610 GGTCTGTCCTCATCACGACCAAGTAATACTGGA------TTTTTTTTTT--CATTAAATGTTCACTATTTTTCTTTGTAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347070 74 - 8369475 GGTCTGTCCTCATCAGGACCAAGTAATACTGGA------TTTTTTTTTTTTCATTAAATGTTCACTATTTTTCTTTGTAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944275 72 - 106955855 GGTCTATCCTCATCAGGACCAAGTAATACTGGA------TTTTTTTTTT--CATTAAATGTTCACTATTTTTCTTTGTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259218 72 + 53671032 GGTCTGTCCTCATCAGGACCAAGTAATACTGGA------TTTTTTTTTT--CATTAAATGTTCACTATTTTTCTTTGTAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713127 73 + 59248254 GGTCTGTCCTCATCAGGACCAAGTAATACTGGA-----TTTTTTTTTTT--CATTAAATGTTCACTATTTTTCTTTGTAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585795 74 - 13342542 GGTCTGTCCTCATCAGGACCAAGTAATACTGGA----TTTTTTTTTTTT--CATTAAATGTTCACTATTTTTCTTTGTAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5509370 75 + 7714307 GGTCTGTCCTCATCAGGACCAAGTAATACTGGA---TTTTTTTTTTTTT--CATTAAATGTTCACTATTTTTCTTTGTAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309899 78 + 50890351 GGTCTGTCCTCATCAGGACCAAGTAATACTGGATTTTTTTTTTTTTTTT--CATTAAATGTTCACTATTTTTATTTGTAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945631 75 - 2385121 GGTCTGTCCTCATCAGGACCAAGTAATACTGGA---TTTTTTTTTTTTT--CATTAAATGTTCACTATTTTTCTTTGTAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2388965 76 + 4274983 GGTCTGTCCTCATCAGGACCAAGTAATACTGGA--TTTTTTTTTTTTTT--CATTAAATGTTCACTATTTTTCTTTGTAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28599904 75 + 49145316 GGTCCGTCCTCAACAGGACCAAGTACTACTAGA---TTTTTTTTTTTTT--CATTAAATGTTCACTATTTTACTTTGTAT i calJac3.chr22 C 0 I 332 s saiBol1.JH378197 5448543 78 + 8899380 CTTCTGTCCTCAACAGGACCAAGTACTACTAGATTTTTTTTTTTTTTTT--CATTAAATGTTCACTATTTTACTTTGTAT i saiBol1.JH378197 C 0 I 327 s aotNan1.NW_018505377v1 403182 71 - 4471408 GGTCTGTCCTCAACAGGACCAAGTACTACTAGA-------TTTTTTTTT--CATTAAATGTTCACTATTTTACTTTGTAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3993987 71 - 30143674 GGTCTGTGCTCAACAGGACCAAGTGATACGGGA-------TTTTTTTTT--CATTAAATGTTTACTAATTTTCTTTGTAT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 610503 71 + 2501019 GGTCTGTCCTCAACAGGACCAAGTAATACGGGA-------TTTTTTTTT--CATTAAATGTTTACTAATTTTCTTTGTAT i proCoq1.NW_012149263v1 I 52 C 0 s canFam3.chr1 4653626 73 - 122678785 GATCTGCCCTCAGCAGGACC-AGTAATA---GA-TTCCCCCCCTCTCCC--CACTAAATGTTCACCATTTTTCTTGGTAT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 390426 70 + 643850 GATCTGTCCTCAGCAGGACCAAGTAATAGTGGA--------TTTTTTTT--CATAAACTATTCACTATATTCCTTTGTAT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e cebCap1.NW_016107633v1 1655019 1816 - 2680843 I a score=106605.000000 s hg38.chr19_GL383574v1_alt 123584 8 + 155864 GAAATTGA s panTro5.chr19 36191205 8 + 61309027 GAAATTGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935433 8 + 64411610 GAAATTGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347144 8 - 8369475 GAAATTGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944347 8 - 106955855 GAAATTGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259290 8 + 53671032 GAAATTGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713200 8 + 59248254 GAAATTGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585869 8 - 13342542 GAAATTGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5509445 8 + 7714307 GAAATTGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309977 8 + 50890351 GAAATTGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945706 8 - 2385121 GAAATTGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389041 8 + 4274983 GAAATTGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600311 8 + 49145316 GAAATTGA i calJac3.chr22 I 332 C 0 s saiBol1.JH378197 5448948 8 + 8899380 gaaaTTGA i saiBol1.JH378197 I 327 C 0 s cebCap1.NW_016107633v1 1656835 8 - 2680843 gaaATTGA i cebCap1.NW_016107633v1 I 1816 C 0 s aotNan1.NW_018505377v1 403253 8 - 4471408 TAAATTGA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4653699 8 - 122678785 GAAACTGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 390496 8 + 643850 GAAACTGA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 610574 0 + 2501019 C e micMur3.chr22 3994058 0 - 30143674 C e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I a score=13600.000000 s hg38.chr19_GL383574v1_alt 123592 1 + 155864 g s panTro5.chr19 36191213 1 + 61309027 g i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935441 1 + 64411610 g i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347152 1 - 8369475 g i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944355 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259298 1 + 53671032 g i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713208 1 + 59248254 g i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585877 1 - 13342542 g i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5509453 1 + 7714307 g i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309985 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945714 1 - 2385121 g i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389049 1 + 4274983 g i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600319 1 + 49145316 g i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448956 1 + 8899380 g i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1656843 1 - 2680843 g i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 403261 1 - 4471408 G i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 390504 1 + 643850 G i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 610574 0 + 2501019 C e micMur3.chr22 3994058 0 - 30143674 C e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e canFam3.chr1 4653707 0 - 122678785 C a score=149022.000000 s hg38.chr19_GL383574v1_alt 123593 17 + 155864 gc------caggtatagtgactc s panTro5.chr19 36191214 17 + 61309027 gc------caggtatagtgactc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935442 17 + 64411610 gc------caggtatagtgactc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347153 17 - 8369475 gc------caggtatagtgactc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944356 17 - 106955855 gc------caggcatagtgactc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259299 17 + 53671032 gc------caggcatagtgactc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713209 17 + 59248254 gc------caggcatagtgactc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4585878 17 - 13342542 gc------caggcatagtgactc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5509454 17 + 7714307 gc------caggcatagtgactc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29309986 17 + 50890351 gc------caggcatagtgactc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 945715 17 - 2385121 gc------caggcatagtgactc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389050 17 + 4274983 gc------caggcatagtgactc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600320 17 + 49145316 ga------caggcatggtggctg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448957 17 + 8899380 ga------caggcatcgtggctg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1656844 17 - 2680843 ga------caggcatggtggctg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 403262 23 - 4471408 GACACggccaggcatggtggctc i aotNan1.NW_018505377v1 C 0 I 325 e proCoq1.NW_012149263v1 610574 0 + 2501019 C e micMur3.chr22 3994058 0 - 30143674 C e dasNov3.JH563638 390505 0 + 643850 C e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e canFam3.chr1 4653707 0 - 122678785 C a score=1020394.000000 s hg38.chr19_GL383574v1_alt 123610 104 + 155864 acacctgtaatcccagcactttgggaggtcgaggtgggagggttgcttgagtccaggagtttgagactggcctgggcaacacagtgagactccgtctcttaaaa s panTro5.chr19 36191231 104 + 61309027 acacctgtaatcccagcagtttgggaggtcgaggtgggagggttgcttgagtccaggagtttgagactggcctgggcaacacagtgagactccgtctcttaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935459 104 + 64411610 acacctgtaatcccagcagtttgggaggtcgaggtgggagggttgcttgagtccaggagtttgagactggcctgggcaacacagtgagactccgtctcttaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347170 104 - 8369475 acacctgtaatcccagcactttgggaggtcgaggtgggagggttgcttgagtccaggagtttgagactggcctgggcaacacagtgagactccgtctcttaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944373 104 - 106955855 acacttgtaatcccagcactttgggaggtcgaggtggaaggattgcatgagtccaggagtttgagactgacctgggcaacacagtgagactccgtctcttaaaa i nomLeu3.chr10 C 0 I 11 s rheMac8.chr19 30259316 104 + 53671032 acacttgtaatcccagcactttgggagggtgaggtgggaggattggttgagtccaggagtttgagactggcctgggcaacactgtgagaccccatctcttaaaa i rheMac8.chr19 C 0 I 312 s macFas5.chr19 34713226 104 + 59248254 acacttgtaatcccagcactttgggagggtgaggtgggaggattggttgagtccaggagtttgagactggcctgggcaacactgtgagaccccatctcttaaaa i macFas5.chr19 C 0 I 309 s macNem1.NW_012011689v1 4585895 104 - 13342542 acacttgtaatcccagcactttgggagggtgaggtgggaggattggttgagtccaggagtttgagactggcctgggcaacactgtgagaccccatctcttaaaa i macNem1.NW_012011689v1 C 0 I 312 s cerAty1.NW_012005268v1 5509471 104 + 7714307 acacttgtaatcctagcactttgggagggtgaggtggaaggaatggttgagtccaggagtttgagactggcctgggcaacactgtgagaccccatctcttaaaa i cerAty1.NW_012005268v1 C 0 I 705 s chlSab2.chr6 29310003 104 + 50890351 acacttgtaatcccagcactttgggagggtgaggtgggaggattggttgagtccaggagtttgagactggcctgggcaacagtgtgagaccccatctcttaaaa i chlSab2.chr6 C 0 I 4097 s manLeu1.NW_012102454v1 945732 104 - 2385121 acacttgtaatcctagcactttgggagggtgaggtggaaggattggttgagtccaggagtttgagactggcctgggcaacgctgtgagaccccatctcttaaaa i manLeu1.NW_012102454v1 C 0 I 311 s colAng1.NW_012111697v1 2389067 104 + 4274983 acacttgtaatcccagcactttgggaggttgaggtgggaggattgcttgagtccaggagtttgagactggcccaggcaacacagtgagaccccgtctcttaaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600337 104 + 49145316 acacctgtaatcccagcactttgggaggtcagagtgggatgattgcttgaatccaggagtttgaaactgacctgggcaacacagtgagatcctgtctctttaaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5448974 104 + 8899380 acacctgtaatcccagcactttgggaggtcagagtgggatgattgcttgattccaggagtttgaaactggcctatgcaacacagtgagaccccgtctctttaaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1656861 104 - 2680843 acacctgtaatcccagcactttgggaggtcagagtgggatgattgcttgagtccaggagtttgaaactggcctgtgcaacacagtgagaccccgtctctttaaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 403610 104 - 4471408 acacctgtaatcccagcactttgggaggtcagagtgggatgattgcttgagtccaggagtttgaaactggcctgcgcaacacagtgagaccccgtctctttaaa i aotNan1.NW_018505377v1 I 325 C 0 e proCoq1.NW_012149263v1 610574 0 + 2501019 C e micMur3.chr22 3994058 0 - 30143674 C e dasNov3.JH563638 390505 0 + 643850 C e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e canFam3.chr1 4653707 0 - 122678785 C a score=2997.000000 s hg38.chr19_GL383574v1_alt 123714 1 + 155864 g s panPan2.chr19 39935563 1 + 64411610 a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347274 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944488 1 - 106955855 A i nomLeu3.chr10 I 11 C 0 s macFas5.chr19 34713639 1 + 59248254 a i macFas5.chr19 I 309 C 0 s colAng1.NW_012111697v1 2389171 1 + 4274983 a i colAng1.NW_012111697v1 C 0 I 5 s calJac3.chr22 28600441 1 + 49145316 a i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5449078 1 + 8899380 a i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1656965 1 - 2680843 a i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 403714 1 - 4471408 a i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 610574 0 + 2501019 C e micMur3.chr22 3994058 0 - 30143674 C e dasNov3.JH563638 390505 0 + 643850 C e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e chlSab2.chr6 29310107 4097 + 50890351 I e canFam3.chr1 4653707 0 - 122678785 C e manLeu1.NW_012102454v1 945836 311 - 2385121 I e cerAty1.NW_012005268v1 5509575 705 + 7714307 I e macNem1.NW_012011689v1 4585999 312 - 13342542 I e rheMac8.chr19 30259420 312 + 53671032 I e panTro5.chr19 36191335 0 + 61309027 C a score=88550.000000 s hg38.chr19_GL383574v1_alt 123715 13 + 155864 -----aag----aaagaaaAAA s panTro5.chr19 36191335 13 + 61309027 -----aag----aaagaaaaAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935564 13 + 64411610 -----aag----aaagaaaAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347275 12 - 8369475 -----aag----aaag-aaaAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944489 13 - 106955855 -----AAG----AAAGGAAAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259732 13 + 53671032 -----aaG----AAAGAAAAAA i rheMac8.chr19 I 312 C 0 s macFas5.chr19 34713640 13 + 59248254 -----aaG----AAAGAAAAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586311 13 - 13342542 -----aaG----AAAGAAAAAA i macNem1.NW_012011689v1 I 312 C 0 s chlSab2.chr6 29314204 13 + 50890351 -----aag----aaagaaAAAA i chlSab2.chr6 I 4097 C 0 s manLeu1.NW_012102454v1 946147 13 - 2385121 -----aag----aaAGAAAAAA i manLeu1.NW_012102454v1 I 311 C 0 s colAng1.NW_012111697v1 2389177 13 + 4274983 -----aag----aaAGAAAAAA i colAng1.NW_012111697v1 I 5 C 0 s calJac3.chr22 28600442 18 + 49145316 aaatgaaa----aaaGAAAGAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5449079 22 + 8899380 aaatgaaaaaaTAAAGAAAGAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1656966 18 - 2680843 aaatgaaa----aaaGAAAGAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 403715 22 - 4471408 aaacgaaaaaaGAAAGAAAGAA i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 610574 0 + 2501019 C e micMur3.chr22 3994058 0 - 30143674 C e dasNov3.JH563638 390505 0 + 643850 C e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e canFam3.chr1 4653707 0 - 122678785 C e cerAty1.NW_012005268v1 5509575 705 + 7714307 I a score=84654.000000 s hg38.chr19_GL383574v1_alt 123728 8 + 155864 GAAATTGA s panTro5.chr19 36191348 8 + 61309027 GAAATTGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935577 8 + 64411610 GAAATTGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347287 8 - 8369475 GAAATTGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944502 8 - 106955855 GAAATCGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259745 8 + 53671032 GAAATTCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713653 8 + 59248254 GAAATTCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586324 8 - 13342542 GAAATTCA i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29314217 8 + 50890351 GAAATTCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946160 8 - 2385121 GAAATTCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389190 8 + 4274983 GAAATTCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600460 8 + 49145316 GAAATTGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5449101 8 + 8899380 GAAATTGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1656984 8 - 2680843 GAAATTGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 403737 8 - 4471408 GAAATTGA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3994058 8 - 30143674 GAAATTGA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 610574 8 + 2501019 GAAATTGA i proCoq1.NW_012149263v1 C 0 C 0 e dasNov3.JH563638 390505 0 + 643850 C e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e canFam3.chr1 4653707 0 - 122678785 C e cerAty1.NW_012005268v1 5509575 705 + 7714307 I a score=13923.000000 s hg38.chr19_GL383574v1_alt 123736 1 + 155864 A s panTro5.chr19 36191356 1 + 61309027 A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935585 1 + 64411610 A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347295 1 - 8369475 A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944510 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259753 1 + 53671032 A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713661 1 + 59248254 A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586332 1 - 13342542 A i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29314225 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946168 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389198 1 + 4274983 A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600468 1 + 49145316 A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5449109 1 + 8899380 A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1656992 1 - 2680843 A i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 403745 1 - 4471408 A i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3994066 1 - 30143674 A i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 610582 1 + 2501019 A i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4653707 1 - 122678785 A i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 390505 0 + 643850 C e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e cerAty1.NW_012005268v1 5509575 705 + 7714307 I a score=189567.000000 s hg38.chr19_GL383574v1_alt 123737 13 + 155864 TATGTGGTGATTA s panTro5.chr19 36191357 13 + 61309027 TATGTGGTGATTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935586 13 + 64411610 TATGTGGTGATTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347296 13 - 8369475 TATGTGGTGATTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944511 13 - 106955855 TGTGTGGTGATTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259754 13 + 53671032 TATGTGGTGATTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713662 13 + 59248254 TATGTGGTGATTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586333 13 - 13342542 TATGTGGTGATTA i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29314226 13 + 50890351 TATGTGGTGATTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946169 13 - 2385121 TATGTGGTGATTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389199 13 + 4274983 TATGTGGTGATTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600469 13 + 49145316 TATGTGGTGAGTA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5449110 13 + 8899380 TATGTGGTGATTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1656993 13 - 2680843 TATGTGGTCATTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 403746 13 - 4471408 TATGTGGCGATTA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3994067 13 - 30143674 TATGTGGTGATTA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 610583 13 + 2501019 TATGTGGTGATTA i proCoq1.NW_012149263v1 C 0 I 123 s canFam3.chr1 4653708 13 - 122678785 TATATGGTGGTTA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 390505 13 + 643850 TATGTGGTGATTA i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e cerAty1.NW_012005268v1 5509575 705 + 7714307 I a score=541147.000000 s hg38.chr19_GL383574v1_alt 123750 52 + 155864 CTACCCGTTTCATTTACTTTTT-TACTTATTAACGTAGTGACTGTTTAAAAA-A s panTro5.chr19 36191370 52 + 61309027 CTACCCGTTTCATTTACTTTTT-TACTTATTAACGTAGTGACTGTTTAAAAA-A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935599 52 + 64411610 CTACCCGTTTCATTTACTTTTT-TACTTATTAACGTAGTGACTGTTTAAAAA-A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347309 52 - 8369475 CTACCCGTTTCATTTACTTTTT-TACTTATTAACGTAGTGACTGTTTAAAAA-A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944524 52 - 106955855 CTACCCGTTTCATTTACTTTTT-TACTTATTAACGTAGTGACCGTTTAAAAA-A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259767 52 + 53671032 CTACCCGTTTCATTTACTTTTT-TCCTTATTAATGTAGTGACTGCTTAAAAA-A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713675 52 + 59248254 CTACCCGTTTCATTTACTTTTT-TCCTTATTAATGTAGTGACTGCTTAAAAA-A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586346 52 - 13342542 CTACCCGTTTCATTTACTTTTT-TCCTTATTAATGTAGTGACTGCTTAAAAA-A i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29314239 52 + 50890351 CTACCCGTTTCATTTACTTTTT-TACTTATTAATATAGTGACTGCTTAAAAA-A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946182 52 - 2385121 CTACCCGTTTCATTTACTTTTT-TACTTATTAATGTAGTGACTGCTTAAAAA-A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389212 52 + 4274983 CTACCCGTTTCATTTACTTTTT-TACTTACTAATGTAGTGACTGCTTAAAAA-A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600482 53 + 49145316 CCACCTGCTTCATTTACTTTTT-TACTTATAAATGTAGTAAGTGTTTAAAAATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5449123 53 + 8899380 CCACCTGTTTCATTTACTTTTT-TACTTATAAATGTAGTGCCTATTTAAAAATA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657006 53 - 2680843 CCACCCCTTTCATTTACTTTTT-TACTTATAAATGTAGTGACTGTTTAAAAATA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 403759 53 - 4471408 CCACCCGTTTCATTTACTTTTT-TACTTATAAATGTAGTGACCGTTTAAAAATA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3994080 51 - 30143674 -GATTTATTTCATTTACTTTTC-TACTGATTAATGTGGTGACTATTTTAAAA-A i micMur3.chr22 C 0 I 70 s canFam3.chr1 4653721 48 - 122678785 CCATCCATTTCATTTACTTTTC-TACTTATTTATGTG----CTGTTTAGAAA-A i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 390518 46 + 643850 -----CCATCCATTTATTTTTTCTACTTATTTATATACTGACT--TTAAAAA-A i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 610596 123 + 2501019 I e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e cerAty1.NW_012005268v1 5509575 705 + 7714307 I a score=24876.000000 s hg38.chr19_GL383574v1_alt 123802 8 + 155864 -A-GTTACGC s panTro5.chr19 36191422 8 + 61309027 -A-GTTACGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935651 8 + 64411610 -A-GTTACGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347361 8 - 8369475 -A-GTTACGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944576 8 - 106955855 -A-GTTACAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259819 9 + 53671032 -ATGTTATGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713727 9 + 59248254 -ATGTTATGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586398 9 - 13342542 -ATGTTATGC i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29314291 9 + 50890351 -ATGTTATGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946234 9 - 2385121 -ATGTTATGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389264 9 + 4274983 -GTGTTATGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600535 9 + 49145316 -ATGTTACAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5449176 9 + 8899380 -ATGTTACAC i saiBol1.JH378197 C 0 I 1379 s cebCap1.NW_016107633v1 1657059 9 - 2680843 -ATATTACAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 403812 9 - 4471408 -ATGTTACAC i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4653771 8 - 122678785 --AACTACCC i canFam3.chr1 I 2 C 0 s dasNov3.JH563638 390564 2 + 643850 AA-------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 610596 123 + 2501019 I e micMur3.chr22 3994131 70 - 30143674 I e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e cerAty1.NW_012005268v1 5509575 705 + 7714307 I a score=421483.000000 s hg38.chr19_GL383574v1_alt 123810 54 + 155864 ATTGATCTTCCTGTTCCTTCCCCACCAAAAATAAAAGCAAAAACAACAAGCCAC s panTro5.chr19 36191430 54 + 61309027 ATTGATCTTCCTGTTCCTTCCCCACCAAAAATAAAAGCAAAAACAGCAAACCAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935659 54 + 64411610 ATTGATCTTCCTGTTCCTTCCCCACCAAAAATAAAAGCAAAAACAGCAAACCAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347369 54 - 8369475 GTTGATCTTCCTGTTCCTTCCCCACCAAAAATAAAAGCAAAAACAACAAACCAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944584 54 - 106955855 GTTGATCTTCCTGTTCCTCCCCCACCAAAAATAAAAGCAAAAACAACAAACCAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259828 54 + 53671032 ATTGATCTTCCTGTTCCTCCCCCACCAAAAATAAAAGCAAAAACAACAAACCAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713736 54 + 59248254 ATTGATCTTCCTGTTCCTCCCCCACCAAAAATAAAAGCAAAAACAACAAACCAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586407 54 - 13342542 ATTGATCTTCCTGTTTCTCCCCCACCAAAAATAAAAGCAAAAACAACAAACCAC i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29314300 54 + 50890351 ATTGATCTTCCTGTTCCTCCCCCACCAAAAATAAAAGCAAAAACAACAAACCAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946243 54 - 2385121 ATTGATCTTCCTGTTCCTCCCCCACCAAAAATAAAAGCAAAAACAACAAACCAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389273 54 + 4274983 GTTGATCTTCCTGTTCCTCCCCCACCAATAATAAAAGCAAAAACAACAAACCAC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600544 54 + 49145316 GTTGATCTTCCTGTTCCTCTCCCACCAAAAATAAAAACAAAAACAACAAACCAC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1657068 54 - 2680843 GTTGATCTTCCTGTTCCTCTCCCACCAAAAATAAAAACAAAAACAACAAACCAC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 403821 48 - 4471408 GTTGATCTTCCTGTTCCTCTCCCACCAAAAAT------AAAAACAACAAACCAC i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4653779 32 - 122678785 TTTGATCTTCCTCTTTCTCCACCCCCAA-AATA--------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 390566 18 + 643850 --------------------------AAACAAAAAAACAAAAAC---------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 610596 123 + 2501019 I e micMur3.chr22 3994131 70 - 30143674 I e otoGar3.GL873654 5525599 2749 + 5549422 I e mm10.chr7 111137038 1247 - 145441459 I e saiBol1.JH378197 5449185 1379 + 8899380 I e cerAty1.NW_012005268v1 5509575 705 + 7714307 I a score=100853.000000 s hg38.chr19_GL383574v1_alt 123864 10 + 155864 CCCTCAAATG s panTro5.chr19 36191484 10 + 61309027 CCCTCAAATG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935713 10 + 64411610 CCCTCAAATG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347423 10 - 8369475 CCCTCAAATG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944638 10 - 106955855 CCCTCAATTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259882 10 + 53671032 CCCTCAATTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713790 10 + 59248254 CCCTCAATTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586461 10 - 13342542 CCCTCAATTG i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29314354 10 + 50890351 CCCTCAATTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946297 10 - 2385121 CCCTCAATTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389327 10 + 4274983 CCCTCCATTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600598 10 + 49145316 CCCTCAATTG i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1657122 10 - 2680843 CCCTCAACTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 403869 10 - 4471408 CCCTCAATTG i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111138285 10 - 145441459 CCCTCAATTT i mm10.chr7 I 1247 C 0 s canFam3.chr1 4653811 10 - 122678785 CCCTCAATTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 390584 9 + 643850 -CTTCAATTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 610596 123 + 2501019 I e micMur3.chr22 3994131 70 - 30143674 I e otoGar3.GL873654 5525599 2749 + 5549422 I e saiBol1.JH378197 5449185 1379 + 8899380 I e cerAty1.NW_012005268v1 5509575 705 + 7714307 I a score=599341.000000 s hg38.chr19_GL383574v1_alt 123874 54 + 155864 AAACAAAATTAAGCCTGTTCTTTATCTATATTACTACTTAGCACA-----------TTTGACCTA s panTro5.chr19 36191494 54 + 61309027 AAACAAAATTAAGCCTGTTCTTTATCTATATTACTACTTAGCACA-----------TTTGACCTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935723 54 + 64411610 AAACAAAATTAAGCCTGTTCTTTATCTATATTACTACTTAGCACA-----------TTTGACCTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347433 54 - 8369475 AAACAAAATTAAGCCTGTTCTTTATCTATATTACTACTTAGCACA-----------TTTGACCTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944648 54 - 106955855 AAACAAAATTAAGCCTGTTCTTTACCTATATGACTACTTAGCACA-----------TTTGACCAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259892 54 + 53671032 AAACAAAATTAAGCCTGTTCTTTATCTATATGACTACTTAGCACA-----------TTTGACCTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713800 54 + 59248254 AAACAAAATTAAGCCTGTTCTTTATCTATATGACTACTTAGCACA-----------TTTGACCTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586471 54 - 13342542 AAACAAAATTAAGCCTGTTCTTTATCTATATGACTACTTAGCACA-----------TTTGACCTA i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29314364 54 + 50890351 AAACAAAATTAAGCCTGTTCTTTATCTATATGACTACTTAGCACA-----------TTTGACCTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946307 54 - 2385121 AAACAAAATTAAGCCTGTTCTTTATCTATATGACTGCTTAGCACA-----------TTTGACCTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389337 54 + 4274983 AAACAAAATTAAGCCTGTTCTTTATCTATATGACTACTTAGCACA-----------TTTGACCTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600608 54 + 49145316 AAACAAAATTAAGCCTGTTCTTTATCTGTATGACTGTGTAGCACA-----------TTTAACCTA i calJac3.chr22 C 0 I 1 s cebCap1.NW_016107633v1 1657132 54 - 2680843 AAACAAAATTAAGCCTGTTCTTTATCTGTATGACTATGTAGCACA-----------TTTGACCTA i cebCap1.NW_016107633v1 C 0 I 5 s aotNan1.NW_018505377v1 403879 54 - 4471408 AAACAAAATTAAGCCTGTTCTTTATCTGTATGACTATGTAGCACA-----------TTTGACCTA i aotNan1.NW_018505377v1 C 0 I 1 s micMur3.chr22 3994201 54 - 30143674 AAACAAAATTAAGCCTGTCCTTCGTCTATATGACTATTTAACATG-----------TTTGGCCTA i micMur3.chr22 I 70 I 4 s proCoq1.NW_012149263v1 610719 54 + 2501019 AAACAAAATTAAGCCTGTCTTTCATCTATATGACTATTTAACACA-----------TTTGGCCTG i proCoq1.NW_012149263v1 I 123 I 1 s mm10.chr7 111138295 51 - 145441459 AAACAGAATTAAGCCTGTCCCTAA---AAATGACCGTTTAACACA-----------TTTGACATA i mm10.chr7 C 0 I 7 s canFam3.chr1 4653821 40 - 122678785 AAACAAAAT------TGCCCATCATCTGTACGACTGTTTA------------------TGCCTT- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 390593 60 + 643850 AAGTAAATGTAAATCTGTGCTTC-----CAAGATTATTTGACATATTTATAAATTGTTTGATCTG i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5525599 2749 + 5549422 I e saiBol1.JH378197 5449185 1379 + 8899380 I e cerAty1.NW_012005268v1 5509575 705 + 7714307 I a score=109181.000000 s hg38.chr19_GL383574v1_alt 123928 14 + 155864 TTTTTTT-AAAACCT s panTro5.chr19 36191548 15 + 61309027 TTTTTTTTAAAACCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935777 14 + 64411610 TTTTTTT-AAAACCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347487 14 - 8369475 TTTTTTT-AAAAGCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944702 12 - 106955855 TTTTTTT-AAAAC-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259946 14 + 53671032 TTTTTTT-AAGACCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713854 14 + 59248254 TTTTTTT-AAGACCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586525 14 - 13342542 TTTTTTT-AAGACCT i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29314418 14 + 50890351 TTTTTTT-AAGACCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946361 14 - 2385121 TTTTTTT-AAGACCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389391 14 + 4274983 TTTTTTC-AAGACCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600663 13 + 49145316 TTTTTTT-AAAACA- i calJac3.chr22 I 1 C 0 s cebCap1.NW_016107633v1 1657191 13 - 2680843 TTTTTTT-TAAACA- i cebCap1.NW_016107633v1 I 5 I 1 s aotNan1.NW_018505377v1 403934 12 - 4471408 TTTTTTT-AAAAC-- i aotNan1.NW_018505377v1 I 1 C 0 s micMur3.chr22 3994259 14 - 30143674 TTTTTTT-TAAACCT i micMur3.chr22 I 4 C 0 s proCoq1.NW_012149263v1 610774 14 + 2501019 TTTTTAA-AAAACCT i proCoq1.NW_012149263v1 I 1 C 0 s otoGar3.GL873654 5528348 14 + 5549422 TTTTTTT-TTAACCT i otoGar3.GL873654 I 2749 C 0 s mm10.chr7 111138353 13 - 145441459 TCCCTCT-AAAGCC- i mm10.chr7 I 7 C 0 s canFam3.chr1 4653861 12 - 122678785 TTTTTTT-AACCT-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 390653 14 + 643850 TTTTTTT-AAAAGTT i dasNov3.JH563638 C 0 C 0 e saiBol1.JH378197 5449185 1379 + 8899380 I e cerAty1.NW_012005268v1 5509575 705 + 7714307 I a score=2178815.000000 s hg38.chr19_GL383574v1_alt 123942 140 + 155864 CTGTTATTTTGAAAGTAAATTTTGGCTCTGTTGACCTTGCGGTTAGAAAAGTTG-TTCTTCTGCTTAAATGAAATGATCAGTTGTTTGTAGATTACCAAATATAAAAGCTCTTCAGAACCGCTAATGATAAGTTGCTTTGG s panTro5.chr19 36191563 140 + 61309027 CTGTTATTTTGAAAGTAAATTTTGGCTCTGTTGACCTTGCGGTTAGAAAAGTTG-TTCTTCTGCTTAAATGAAATGATCAGTTGTTTGTAGATTACCAAATATAAAAGCTCTTCAGAACCGCTAATGATAAGTTGCTTTGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935791 140 + 64411610 CTGTTATTTTGAAAGTAAATTTTGGCTCTGTTGACCTTGCGGTTAGAAAAGTTG-TTCTTCTGCTTAAATGAAATGATCAGTTGTTTGTAGATTACCAAATATAAAAGCTCTTCAGAACCGCTAATGATAAGTTGCTTTGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347501 140 - 8369475 CTGTTATTTTGAAAGTAAATTTTGGCTCTGTTGACCTTGCGGTTAGAAAAGTTG-TTCTTCTGCTGAAATGAAATGATCAGTTGTTTGTACATTACCAAATATAAAAGCTCTTCAGAACCGCTAATGATAAGTTGCTTTGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944714 140 - 106955855 CTGTTATTTTGAGAGTAAATTTTGGCTCTGTTGACCTTGCGGTTAGAAAAGTTG-TTCTTCTGCTTAAATGAAATGATCAGTTGTTTGTAGATTACCAAATATAAAAGCTCTTCAGAACCGCTAATGATAAGTTGCTTTGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30259960 140 + 53671032 CTGTTATTTTGAAAGTAAATTTTGGCTCCGTTGACCTTGTGGTTAGAAAAGTTG-TTCTTCTGCTTAAATGAAATGATCAGTTGTTTGTAGATTACCAAATATAAAAGCTCTTCAGAACCGCTAATGATAAGTTGCTTTGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34713868 140 + 59248254 CTGTTATTTTGAAAGTAAATTTTGGCTCCGTTGACCTTGTGGTTAGAAAAGTTG-TTCTTCTGCTTAAATGAAATGATCAGTTGTTTGTAGATTACCAAATATAAAAGCTCTTCAGAACCGCTAATGATAAGTTGCTTTGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586539 140 - 13342542 CTGTTATTTTGAAAGTAAATTTTGGCTCCGTTGACCTTGTGGTTAGAAAAGTTG-TTCTTCTGCTTAAATGAAATGATCAGTTGTTTGTAGATTACCAAATATAAAAGCTCTTCAGAACCGCTAATGATAAGTTGCTTTGG i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29314432 140 + 50890351 CTGTTATTTTGAAAGTAAATTTTGGCTCCGTTGACCTTGTGGTTAGAAAAGTTG-TTCTTCTGCTTAAATGAAATGATCAGTTGTTTGTAGATTACCAAATATAAAAGCTCTTCAGAACCACTAATGATAAGTTGCTTTGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946375 139 - 2385121 CTGTTATTTTGAAAGTAAATTTTGGCTCCGTTGACCTTGTGGTTAGAAAAGTTG-TTCTTCTGCTTAAATGAAATGATCAGTTGTTTGTAGATTACCAAATATAAAA-CTCTTCAGAACCGCTAATGATAAGTTGCTTTGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389405 140 + 4274983 GTGTTATTTTGAAAGTAAATTTTGGCTCCGTTGACCTTATGGTTAGAAAAGTTG-TTCTTCTGCTTAAATGAAATGATCGGTTGTTTGTAGATTACCAAATATAAAAGCTCTTCAGAACCGCTAATGATAAGTTGCTTTGG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600676 136 + 49145316 -TGTTATTTTCAAAGTAAATTTTGGCTCTGTTCACCCTATGATTAGAAAAGTTG----TTCTGCTTAAATGAAATGATCAGTTGTTTGTAGATTACCAAATATAAAAGCTCTTCAGAACCGCTAATGATAACTTGCTTTGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5450564 140 + 8899380 CTGTTATTTTGAAAGTAAATTTTGGCTCTGTTCATCCTGTGGTTAGAAAAGTTG-TTCTTCTGCTTAAATGAAATGATCAGTTGTTTGTAGATTACCAAATATAAAAGCTCTTCAGAACCGCTAATGATAACTTGCTTTGG i saiBol1.JH378197 I 1379 C 0 s cebCap1.NW_016107633v1 1657205 140 - 2680843 GTGTTATTTTGAAAGTAAATTTTGGCTCTATTCACCCTGTGGTTAGAAAAGTTG-TTGTTCTGCTTAAATGAAATGATCAGTTGTTTGTAGATTACCAAATATAAAAGCTCTTCAGAACCGCTAATGATAACTTGCTTTGG i cebCap1.NW_016107633v1 I 1 C 0 s aotNan1.NW_018505377v1 403946 140 - 4471408 GTGTTATTTTGAAAGTAAATTTTGGCTCTGTTCACCCTGTGGTTAGAAAAGTTG-TTCCTCTGCTTAAATGAAATGATCAGTTGTTTGTAGATTACCAAATATAAAAGCTCTTCAGAACCGCTAATGATAACTTGCTTTGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3994273 140 - 30143674 GTGTTATTTTGAAAGTGAATTTCAGCTCTGTTGACCTTGTGGTTAGAAAAGTTT-TTCTTCTGCTTAAATGAAATTATCAGTTGTTTGTAGATTACCAAATATAAAAGCTGTTCAGAACCACAAATGATAACTTGCTCTGG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 610788 140 + 2501019 GTGTTATTTTGAAAGTGAATTTCAGCTCTGTTGACCTTGTGGTTAGAAAAGTTT-TTCTTCTGCTTAAATGAAATTATCAGTTGTTTGTAGATTTCCAAATATAAAAGCTGTTGAGAACCGCAAATGATAACTTGCTCTGG i proCoq1.NW_012149263v1 C 0 I 280 s otoGar3.GL873654 5528362 138 + 5549422 GTATTATTCTGAAAGTATATTTCAGCTCTGTTGACCTTGTGGTTAG--AAGTTT-TCCTTCTGCTTAAATGAAATTATCAGTTGTTTGTAGATTACTAACTACAAAAGCTATTCAGAACCTCAGATGATAACTTGCTCTGG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111138366 138 - 145441459 CTGTTATTTT-AGAGTAAATCTCAACTGTGTTGACTTTGTGGTTAGAACAGTTT-TTCTTCTTCTTAAATAAAATGATTAGTTGTTTGTAGATCACTAGATATAAAA-TGCCTTAGGACCACTAATGATAACTTGCTTTGG i mm10.chr7 C 0 C 0 s canFam3.chr1 4653873 136 - 122678785 GTGTTACTTTGAAATTAAATTTCAACTCTGTTGACCTCATGGTTAGAAAATTTTTTTCTTCTGCCT-----AAATTATCACTTGTTTGTAGATTACTAAATAAAAAAGCTTTTTAGATCTATTAATGATATCTTGCTTTGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 390667 115 + 643850 GTGTTGTTTTGAAAGTAAATTTCAGCTCTTTTGACTTCCTGATTAGAAAA-TTT-TTCATTAGCTTAAACAAAATTATCAGTTGTTT------------------------TCTAGATCCACTGATGATAACTTGCTTTGT i dasNov3.JH563638 C 0 C 0 e cerAty1.NW_012005268v1 5509575 705 + 7714307 I a score=257121.000000 s hg38.chr19_GL383574v1_alt 124082 21 + 155864 CTTCATAGAGGAACGCCATGG s panTro5.chr19 36191703 21 + 61309027 CTTCATAGAGGAACGCCATGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935931 21 + 64411610 CTTCATAGAGGAACGCCATGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347641 21 - 8369475 CTTCATAGAGGAACGCCATGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944854 21 - 106955855 CTTCATAGAGGAACGCCATGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30260100 21 + 53671032 CTTCATAGAGGAACACCATGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714008 21 + 59248254 CTTCATAGAGGAACACCATGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586679 21 - 13342542 CTTCATAGAGGAACACCATGG i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29314572 21 + 50890351 CTTCATAGAGGAACACCATGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946514 21 - 2385121 CTTCATAGAGGAACACCATGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389545 21 + 4274983 CTTCATAGAGGAACACCATGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600812 21 + 49145316 CTTCGTAGTGGAACGCCATGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5450704 21 + 8899380 CTTGGTAGAGGAACGCCATGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657345 21 - 2680843 CTTCATAGAGGAACGCCATGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404086 21 - 4471408 CTTTGTAGAGGAACGCCATGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3994413 21 - 30143674 TTGTGTAGAGGAATGCTGTAG i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5528500 20 + 5549422 -TTTGTTGTGGAATGCTGTAG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111138504 21 - 145441459 TTTTGTGGAGGAATGCCATAT i mm10.chr7 C 0 C 0 s canFam3.chr1 4654009 21 - 122678785 TATTATAGAGGGATGTCCTGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 390782 21 + 643850 TTGTATAGAGGAACCTCATAT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 610928 280 + 2501019 I e cerAty1.NW_012005268v1 5509575 705 + 7714307 I a score=1031996.000000 s hg38.chr19_GL383574v1_alt 124103 78 + 155864 TTTGTGGTGGTAAATTGTTACAGAGCAAA-TGTCAGTACCA-GAGGCGG--TCATGGATCACCACGTGGAAGCAGGTTGTTC s panTro5.chr19 36191724 78 + 61309027 TTTGTGGTGGTAAATTGTTACAGAGCAAA-TGTCAGTACCA-GAGGCGG--TCGTGGATCACCACGTGGAAGCAGGTTGTTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39935952 78 + 64411610 TTTGTGGTGGTAAATTGTTACAGAGCAAA-TGTCAGTACCA-GAGGCGG--TCGTGGATCACCACGTGGAAGCAGGTTGTTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347662 78 - 8369475 TTTGTGGTGGTAAATTGTTACAGAGCAAA-TGTCAGTACCA-GAGGCGG--TCATGGATCACCACGGGGAAGCAGGTTGTTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944875 78 - 106955855 TTTGTGGTGGTAAATTGTTACAGAGCAAA-TGTCAGTACCA-GAGGCGG--TCATGGATCACCACGTGGAAGCAGGTTGTTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30260121 78 + 53671032 TTTGTGGTGGTAGATTGTTACAGAGTGAA-TGTCAGTACCA-GAGGCGG--TCATGGATCACCACGTGGAAGCAGGTTGTTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714029 78 + 59248254 TTTGTGGTGGTAGATTGTTACAGAGTGAA-TGTCAGTACCA-GAGGCGG--TCATGGATCACCACGTGGAAGCAGGTTGTTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586700 78 - 13342542 TTTGTGGTGGTAGATTGTTACAGAGTGAA-TGTCAGTACCA-GAGGCGG--TCATGGATCACCACGTGGAAGCAGGTTGTTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510280 82 + 7714307 TTTGTGGTGGTAGATTGTTACAGAGCGAAGTGTCAGTACCAGGAGGCGGTCTCATGGATCACCACGTGGAAGCAGGTTGTTC i cerAty1.NW_012005268v1 I 705 C 0 s chlSab2.chr6 29314593 78 + 50890351 TTTGTGGTGGTAGATTGTTACAGAGCGAA-TGTCAGTACCA-GAGGCGG--TCATGGATCACCACGTGGAAGCAGGTTGTTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946535 78 - 2385121 TTTGTGGTGGTAGATTGTTACAGAGCGAA-TGTCAGTACCA-GAGGCGG--TCATGGATCACCATGTGGAAGCAGGTTGTTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389566 78 + 4274983 TTTGTGGTGGTAGATTGTTACAGAGCGAA-TGTCAGTACCA-GAGGCAG--TCATGGATCACCACGTGGAAGCAGGTTGTTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600833 78 + 49145316 TTTGTGGTAGTAGATTGTTACAGAGCAAA-TGTCAGCACCA-GAGGCGG--TCATGGATCACCATGTGGAAGCAGGTTGTTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5450725 78 + 8899380 TTTGTGGTGGTAGATTGTTACAGAGCAAA-TGTCAGCACCA-GAGGCGG--TCATGGATCACCATGTGGAAGCAGGTTGTTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657366 78 - 2680843 TTTGTGGTGGTAGATTGTTACAGAGCAAA-TGTCAGCACCA-GAGGCGG--TCATGGATCACCATGTGGAAGCAGGTTGTTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404107 78 - 4471408 TTTGTGGTGGTAGATTGTTACAGAGCAAA-TGTCAGCACCA-GAGGCGG--TCATGGATCACCATGTGAAAGCAGGTTGTTC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3994434 78 - 30143674 TTTGCGGTGATAAGTTGTTATGGGACAAA-TGTCAGCACCA-GAGGCAG--TTCAGGATCACCGCATGGAGGCAGGtggttc i micMur3.chr22 C 0 I 216 s otoGar3.GL873654 5528520 73 + 5549422 TTTGTGGTGATAAGTGGCTACAGTGCAGA-TGTCAGCACCA-GAGGCAG--CCCAGAAACAC----TGGAGGCGCCTGGTT- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111138525 59 - 145441459 TTTGTGG---TAAAGTCTTATAGGGTAAA-TGCCAGC-TCA-GAGGCAG--TC------CACACCCTG---------TGTCC i mm10.chr7 C 0 I 4 s canFam3.chr1 4654030 74 - 122678785 TTTGTGGTGATGAA-TGTTACCGACCAAG-TGTCAAGACAA-GAGG-----TCAGATGTCATCATGTGGGGGCAgtttgttc i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 390803 50 + 643850 TTTGTGGTGATAAATTGTTA-------AA-----AGtatca----------ttgtgg----------gatggcaatttcttc i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 610928 280 + 2501019 I a score=1626662.000000 s hg38.chr19_GL383574v1_alt 124181 169 + 155864 CCA--CATGAGATTGGTA-------GCG-------AGCCGGTGCTGCATCTGTCTCCTTTCCCACTG----------CATCCTGGGTGCCT---------GGAG------------CCTCACA---------GGGTTGACCCGTGTT--------------GGG------GGTGGG------GATGGTTGTAGAAGCC-TC-TTTATTTTTACTTGTGATAGATTCTGGCACTGATTAGAATGTTTATTCAGT s panTro5.chr19 36191802 168 + 61309027 CCA--CGTGAGATTGGTA-------GCG-------AGCCGGTGCTGCATCTGTCTCCTTTCCCACTG----------CATCCTGGGTGCCT---------GGAG------------CCTCACA---------GGGTTGACCCGTGTT--------------GGG------GGTGGG------GATGGTTGTAGAAGCC-TC-TTTATTTT-ACTTGTGATAGATTCTGGCACTGATTAGAATGTTTATTCAGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936030 168 + 64411610 CCA--CGTGAGATTGGTA-------GCG-------AGCCGGTGCTGCATCTGTCTCCTTTCCCACTG----------CATCCTGGGTGCCT---------GGAG------------CCTCACA---------GGGTTGACCCGTGTT--------------GGG------GGTGGG------GATGGTTGTAGAAGCC-TC-TTTATTTT-ACTTGTGATAGATTCTGGCACTGATTAGAATGTTTATTCAGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347740 168 - 8369475 CCA--CGTGAGATTGGTA-------GCG-------AGCAGGTGCTGCATCTGTCTCCTTTCCCACTG----------CATCCTGGGTGCCT---------GGAG------------CCTCACA---------GGGTTGACCCGTGTT--------------GGG------GGTGGG------GATGGTTGTAGAAGCC-TC-TTTATTTT-ACTTGTGATAGATTCTGGCACTGATTAGAATGTTTATTCAGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63944953 168 - 106955855 CCA--CGTGAGACTGGTA-------GCG-------AGCAGGTGCTGCATCTGTCTCCTTTCCCACTG----------CATCCTGGGTGCCT---------GGAG------------CCTCCCA---------GGGTTGTCCTGTGTT--------------GGG------GGTGGG------GATGGTTGTAGAAGCC-TC-TTTATTTT-ACTTGTGATAGATTCTGGCACTGATTAGAATGTTTATTCAGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30260199 179 + 53671032 CCA--CGTGAGACTGGTA-------GCA-------AGCAGGTGGTGCATCTGTCTCCTTTCCCACTG----------CATCCTGGGTGTCT---------GGAG------------CCTCACA---------GGGTTGACCTGTGTCACTGGC--------GGG-GGGGGGGTGGG------GATGGTTGTAGAAGCC-TC-CTTATTTT-ACTTATGATAGATTCTGACACTGATTAGAAGGTTTATTCAGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714107 179 + 59248254 CCA--CGTGAGACTGGTA-------GCA-------AGCAGGTGGTGCATCTGTCTCCTTTCCCACTG----------CATCCTGGGTGTCT---------GGAG------------CCTCACA---------GGGTTGACCTGTGTCACTGGC--------GGG-GGGGGGGTGGG------GATGGTTGTAGAAGCC-TC-CTTATTTT-ACTTATGATAGATTCTGACACTGATTAGAAGGTTTATTCAGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586778 180 - 13342542 CCA--CGTGAGACTGGTA-------GCA-------AGCAGGTGGTGCATCTGTCTCCTTTCCCACTG----------CATCCTGGGTGTCT---------GGAG------------CCTCACA---------GGGTTGACCTGTGTCACTGGC--------GGGAGGAGGGGTGGG------GATGGTTGTAGAAGCC-TC-CTTATTTT-ACTTATGATAGATTCTGACACTGATTAGAAGGTTTATTCAGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510362 186 + 7714307 CCAGGCGTGAGACTGGTA-------GCA-------AGCAGGTGGTGCATCTGTCTCCTTTCCCACTG----------CTCCTGGGGTGTCT---------GGAG------------CCTCACA---------GGGTTGACCTGTGTCACTGG---------GGG-GGGGGGGTGGGTGGGGAGATGGTTGTAGAAGCC-TC-TTTATTTT-ACTTATGATAAATTCTGACACTGATTAGAAGGTTTATTCAGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29314671 173 + 50890351 CCA--TGTGAGACTGGTA-------GCA-------AGCAGGTGGTGCATCTGTCTCCTTTCCCACTG----------CGTCCTGGGTGTCT---------GGAG------------CCTCACA---------GGGTTGACCTGTGTCACT-----------GGG-TGGGGGGTGGG------GATGGTTGTAGAAGCC-TC-TTTATTTT-ACTTATGATAGATTCCGACACTGATT---AGGTTTATTCAGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946613 187 - 2385121 CCA--CGTGAGACTGGTA-------GCA-------AGCAGGTGGTGCATCTGTCTCCTTTCCCACTG----------CATCCTGGGTGTCT---------GGAG------------CCTCACA---------GGGTTGACCTGTGTCACTGGCGGGGGGAGGGG-GTGGGGGTGGA------GATGGTTGTAGAAGCC-TC-TTTATTTT-ACTTATGATAAATTCTGACACTGATTAGAAGGTTTATTCAGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389644 178 + 4274983 CCA--CGTGAGACTGGTA-------GCA-------AGGAGCTGGTGCATCTGTCTCCTTTCCCACTG----------CATCCTGGGTGTCT---------GGAG------------CCGCACA---------GGGTTGACCTGTGTCACTGA---------GTG-GGGCGGTGGGG------GATGGTTGTAGAAGCC-TC-TTTATTTT-ACTTTTGATAGATTCTGGCACTGATTAGAAGGTTTATTCAGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28600911 165 + 49145316 CCA--CGTGAGACTGGTA-------GCA-------AGCAC-TGCTGCATCTGGCTCCTTTCCCACTG----------CATCCCGGGTGCCT---------GGAG------------CCTCAAA---------GGGCTGACCTGTGTT--------------GGC--------AGGG------GATGGGTGTAGAAGGC-TC-TTTATTTT-ACTTATGATAGATTCTGGTACTGATTAGAATGTTCATTCAAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5450803 166 + 8899380 CCA--CGTGAGCCTGGTA-------GCG-------AGCATGTGCTGCATCTGGCTCCTTTCCCACTG----------CATCCCGGGTGCCT---------GGAG------------CCTCACA---------GGGCTGACCTGTGTC--------------GGC--------AGGG------GATGGGTGTAGAAAGC-TC-TTTATTTT-ACTTATGATAGATTCTGGCACTTTTTAGAATGTTTATTCAGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657444 166 - 2680843 CCA--CGTGAGACTGGTA-------GGG-------AGCATGTGCTGCATCTGGCTCCTTTCCCACTG----------CATCCCTGGTGCCT---------GGAG------------CCTCACA---------GGGCTGACCTGTGTC--------------GGC--------AGGG------GATGGATGTAGAAGGC-TC-TTTATTTT-ACTTATGATAGATTCTGGCACTGATTAGAAtgtttattcagt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404185 166 - 4471408 CCA--CGTGAGACTGGTA-------GCA-------GGCACGTGCTGCATCTGGCTCCTTTCCCACTG----------CATCCCGGGTGCCT---------GGAG------------CCTCACA---------GGGCTGACCTGTGTC--------------GGC--------AGGG------GATGGGTGTAGAAGGC-TC-TTTATTTT-GCTTATGATAGATTCTGGCACTGATTAGAATGTTTATTCAGT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5528593 163 + 5549422 ---------AGACTGGT--------GAG-------AGCAGGTGCTGTGTCTGCCTCACTTCCCACTG----------CATCCCAGTTGCCC---------TGAG------------GTCAACACGTTTTGCTGGGTTGACCTGTGTA--------------GGT--------GGGG------AGTGG--ATAGAAGCG-TCTTTTATTTC-AACTGAGACAGAGTCTAGCGCTAATTGGAATTTTTATTT--- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111138588 129 - 145441459 CTA--CTATAGGCTGATA-------GC-----------------TGCTTTTGT-TCATGTCTGGGTGACTATGCTGATTTTCTAGGCGGGT---------GAAG------------CTTTATC-----------ATCTACCTACTTGATggt---------ggt----------gg------gatggaacctgagacc-tc----------acatgtgctgggc----------------------------- i mm10.chr7 I 4 C 0 s canFam3.chr1 4654104 187 - 122678785 ccc--cattagaccagaa-------gctccttgacagcaggT------CCTGATTCCCCTTCT-CTG----------CATCCTGTGTGCCTCTAACATTCAGAGCATTCAGGACCACTTGGCG---------GGGTTGACC-ATGTT--------------GCT--------GGAG------GATGGGTATAAAAAATATC-TTCATTTT-AATTTTGGTAGATTCAAATGTTGATCAGAGTTCTTATTTGGT i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 390853 166 + 643850 -cc--cattagactgaaaactccttgtg-------agcaga---tgtagctgccttgttcactgctg----------tatctcttgagcat---------gcgg-------gcatagctcaca---------gGGTTCACCTGTGTC--------------AGT------GAGGGA------GATG----------CA-TC-TTTATTTT-AACTGTGAAAGAGTCTAGCATTGAGAAGaatttttaaatctt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 610928 280 + 2501019 I e micMur3.chr22 3994512 216 - 30143674 I a score=2158.000000 s hg38.chr19_GL383574v1_alt 124350 3 + 155864 AG-T- s panTro5.chr19 36191970 3 + 61309027 AG-T- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936198 3 + 64411610 AG-T- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347908 3 - 8369475 AG-T- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945121 2 - 106955855 AG--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30260378 3 + 53671032 AG-T- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714286 3 + 59248254 AG-T- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586958 3 - 13342542 AG-T- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510548 4 + 7714307 AGTT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29314844 3 + 50890351 AG-T- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946800 3 - 2385121 AG-T- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389822 3 + 4274983 AG-T- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601076 3 + 49145316 TT-T- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5450969 3 + 8899380 AG-T- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657610 3 - 2680843 ag-t- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404351 3 - 4471408 AG-T- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3994728 3 - 30143674 AG-T- i micMur3.chr22 I 216 C 0 s otoGar3.GL873654 5528756 1 + 5549422 ---T- i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111138717 3 - 145441459 ag-g- i mm10.chr7 C 0 C 0 s canFam3.chr1 4654293 3 - 122678785 GG-T- i canFam3.chr1 I 2 I 5 s dasNov3.JH563638 391019 3 + 643850 --ttt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 610928 280 + 2501019 I a score=1071821.000000 s hg38.chr19_GL383574v1_alt 124353 87 + 155864 TT--------------------TTTT----CCT-----------------ATCCGCCTGAGTTTTCATAGCTCAGTATAGGATAACATGGGCTTCGGATTTTGTCAACCAATCAAT-TATA-TAGTAGCT s panTro5.chr19 36191973 87 + 61309027 TT--------------------TTTT----CCT-----------------ATCCGCCTGAGTTTTCATAGCTCAATATAGGCTAACATGGGCTTCGGATTTTGTCAACCAATCAAT-TATA-TAGTAGCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936201 87 + 64411610 TT--------------------TTTT----CCT-----------------ATCCGCCTGAGTTTTCATAGCTCAATATAGGCTAACATGGGCTTCGGATTTTGTCAACCAATCAAT-TATA-TAGTAGCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347911 87 - 8369475 TT--------------------TTTT----CCT-----------------ATCCGCCTGAGTTTTCATAGCTCAATATAGGATAACATGGGCTTCGGATTTTGTCAACCAGTCAAT-TATA-TAGTAGCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945123 87 - 106955855 TT--------------------TTTT----CCT-----------------ATCTGCCTGAGTTTTCATAGCTCAATATAGGATAACATGGTCTTCGGATTTTGTCAACCCATCAAT-TATA-TAGTCGCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30260381 87 + 53671032 TT--------------------TTTT----CCT-----------------ATCCGCCTGAGTTTTCATAGCTCAATATAGGATAACCTGGGCTTCGGACTTTGTCAACCAATCAGT-TATA-TAGTAGCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714289 87 + 59248254 TT--------------------TTTT----CCT-----------------ATCCGCCTGAGTTTTCATAGCTCAATATAGGATAACCTGGGCTTCGGACTTTGTCAACCAATCAGT-TATA-TAGTAGCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4586961 87 - 13342542 TT--------------------TTTT----CCT-----------------ATCCGCCTGAGTTTTCATAGCTCAATATAGGATAACCTGGGCTTCGGACTTTGTCAACCAATCAGT-TATA-TAGTAGCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510552 87 + 7714307 TT--------------------TTTT----CCT-----------------ATCTGCCTGAGTTTTCATAGCTCAATATAGGATAACCT-GGCTTCGGACTTTGTCAACCAATCAGT-TATAGTAGTAGCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29314847 87 + 50890351 TT--------------------TTTT----CCT-----------------ATCCGCCTGAGTTTTCATAGCTCAATATAGGATAACCTGGGCTTCGGACTTTGTCAACCAATCAGT-TATA-TAGTAGCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946803 87 - 2385121 TT--------------------TTTT----CCT-----------------ATCTGCCTGAGTTTTCATAGCTCAATATAGGATAACCTGGGCTTCGAACTTTGTCAACCAATCAGT-TATA-TAGTAGCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389825 78 + 4274983 TT--------------------TTTT----CCT-----------------ATCCGCCTGAGT---------TCAATATAGGATAACCTGGACTTCGGACTTTGTCAACCAATCAAT-TATA-TAGTAGCT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601079 91 + 49145316 TT--------------------TTTTTTCCCCT-----------------ATTGGCTTGAGTTTTCATAGCTCAATATAGGATAACATGGGCTTTGGATTTTGTCAACTGATCAAT-TATG-TAGTAGCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5450972 108 + 8899380 TT--------------------CTgcccccccccccgcccccgccACCCAATTGGCTTAAGTTTTCATAGCTCAATATAGGATAACATGGGCTTTGGATTTTGTCAACTGATCAGT-TATA-TAGTAGCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657613 111 - 2680843 tttttgtttgtttgtttgtttgtttTTCTCCCT-----------------ATTGGCTTGAGTTTTCATAGCTCAATATAGGATAACATGGGCTTTGGATTTTGTCAACTGATCAAT-TATA-TAGTAGCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404354 96 - 4471408 TTTTTTT---------------TTTTTTCCCCT-----------------ATTTACTTGAGTTTTCATAGCTCAATATAGGATAACATGGGCTTCAGATTTTGTCAACTGATCAAT-TTTA-TAGTAGCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3994731 88 - 30143674 TT--------------------TTTT----CTT-----------------ACCTACCTGAGTTTTCATAGCTCAATGTAGGAAAACCTGCACTTTGGGTTTTGTCAACCAATCAATATATA-TAGTAGCT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 611208 87 + 2501019 TT--------------------TTTT----CCT-----------------GTCTACCTGAGTTTTCATAGCTCAGTGTAGGATAACTTGCACTTTGGACTTTGTCAACCAATCAAT-TATG-TAGTAACT i proCoq1.NW_012149263v1 I 280 C 0 s otoGar3.GL873654 5528758 70 + 5549422 AT--------------------TTTT----CCC-----------------ATCTACCTGAGTTTTCGTAGCTCAGTGTAGG-------GTATCTAGGATCTCAT----------AT-TATG-TTCTAGCT i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111138720 56 - 145441459 tg--------------------ctct----acc-----------------atcaagctatg-----------------------------gcctcagcTTCTGCCA--CTGTTAAT-AATG-CTGCTGCT i mm10.chr7 C 0 C 0 s canFam3.chr1 4654301 87 - 122678785 TT--------------------TTTT----CCT-----------------ATGTACTTGAATTTTCAGGGCTCAATTTAGGATAA-ATGGGTTTCAGATTTCATCAGCTGATCAGTTTACT-TGGTAAGT i canFam3.chr1 I 5 C 0 s dasNov3.JH563638 391022 70 + 643850 tt--------------------tttt----ttt-----------------ttttGTCTAG-----------TCAGTGTTGGATAACACAGGCTTCAGATTTTGTCA----ATCAGT-TATT-TAGTGA-- i dasNov3.JH563638 C 0 C 0 a score=-17215.000000 s hg38.chr19_GL383574v1_alt 124440 4 + 155864 CTTT s panTro5.chr19 36192060 4 + 61309027 CTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936288 4 + 64411610 CTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6347998 4 - 8369475 CTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945210 4 - 106955855 Cttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30260468 1 + 53671032 C--- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714376 1 + 59248254 C--- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587048 1 - 13342542 C--- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510639 3 + 7714307 C-TT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29314934 3 + 50890351 C-TT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946890 3 - 2385121 C-TT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389903 3 + 4274983 C-TT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601170 3 + 49145316 C-TT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451080 3 + 8899380 C-TT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657724 3 - 2680843 C-TT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404450 3 - 4471408 C-TT i aotNan1.NW_018505377v1 C 0 I 55 s micMur3.chr22 3994819 3 - 30143674 -CTT i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5528828 3 + 5549422 -CTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4654388 3 - 122678785 -TTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 391092 2 + 643850 --tt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 611295 0 + 2501019 C e mm10.chr7 111138776 0 - 145441459 C a score=137655.000000 s hg38.chr19_GL383574v1_alt 124444 10 + 155864 TGTTTTGTTT s panTro5.chr19 36192064 10 + 61309027 TGTTTTGTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936292 10 + 64411610 TGTTTTGTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348002 10 - 8369475 TGTTTTGTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945214 10 - 106955855 tgttttgttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30260469 10 + 53671032 TGTTTTGTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714377 10 + 59248254 TGTTTTGTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587049 10 - 13342542 TGTTTTGTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510642 10 + 7714307 TGTTTTGTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29314937 10 + 50890351 TGTTTTGTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946893 10 - 2385121 TGTTTTGTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389906 10 + 4274983 TGTTTTGTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601173 10 + 49145316 TGTTTTGTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451083 10 + 8899380 AGTTTTGTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657727 10 - 2680843 CGTTTTGTTT i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3994822 10 - 30143674 TGTTTTGTTT i micMur3.chr22 C 0 I 21 s otoGar3.GL873654 5528831 10 + 5549422 TGTTTTGTTT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111138776 4 - 145441459 ------ACTT i mm10.chr7 C 0 C 0 s canFam3.chr1 4654391 10 - 122678785 TGTTTTATAT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 391094 10 + 643850 tttttttttt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 611295 0 + 2501019 C e aotNan1.NW_018505377v1 404453 55 - 4471408 I a score=19656.000000 s hg38.chr19_GL383574v1_alt 124454 4 + 155864 TTAA s panTro5.chr19 36192074 4 + 61309027 TTAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936302 4 + 64411610 TTAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348012 4 - 8369475 TTAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945224 4 - 106955855 ttaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30260479 4 + 53671032 TTAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714387 4 + 59248254 TTAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587059 4 - 13342542 TTAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510652 4 + 7714307 TTAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29314947 4 + 50890351 TTAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 946903 4 - 2385121 TTAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2389916 4 + 4274983 TTAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601183 4 + 49145316 AAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451093 4 + 8899380 AAAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657737 4 - 2680843 AAAA i cebCap1.NW_016107633v1 C 0 C 0 s otoGar3.GL873654 5528841 4 + 5549422 CTAG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111138780 4 - 145441459 TTAA i mm10.chr7 C 0 I 2 s canFam3.chr1 4654401 1 - 122678785 -T-- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 391104 4 + 643850 ttag i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 611295 0 + 2501019 C e micMur3.chr22 3994832 21 - 30143674 I e aotNan1.NW_018505377v1 404453 55 - 4471408 I a score=42132.000000 s hg38.chr19_GL383574v1_alt 124458 11 + 155864 AATTTATTT---CT------ s panTro5.chr19 36192078 11 + 61309027 AATTTATTT---CT------ i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936306 11 + 64411610 AATTTATTT---CT------ i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348016 11 - 8369475 AATTTAttt---ct------ i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945228 11 - 106955855 aatttattt---tt------ i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30260483 11 + 53671032 AAtttattt---ct------ i rheMac8.chr19 C 0 I 445 s macFas5.chr19 34714391 11 + 59248254 AAtttattt---ct------ i macFas5.chr19 C 0 I 443 s macNem1.NW_012011689v1 4587063 11 - 13342542 AAtttattt---ct------ i macNem1.NW_012011689v1 C 0 I 132 s cerAty1.NW_012005268v1 5510656 11 + 7714307 AAtttattt---ct------ i cerAty1.NW_012005268v1 C 0 I 131 s chlSab2.chr6 29314951 11 + 50890351 AATTTAttt---ct------ i chlSab2.chr6 C 0 I 127 s manLeu1.NW_012102454v1 946907 11 - 2385121 AATTTAttt---ct------ i manLeu1.NW_012102454v1 C 0 I 149 s colAng1.NW_012111697v1 2389920 11 + 4274983 AAtttattt---ct------ i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601187 9 + 49145316 AAATTATTT----------- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451097 10 + 8899380 TTTTTTTTTC---------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657741 9 - 2680843 AAATTTttt----------- i cebCap1.NW_016107633v1 C 0 C 0 s mm10.chr7 111138786 11 - 145441459 TAtttagtt---at------ i mm10.chr7 I 2 C 0 s dasNov3.JH563638 391108 11 + 643850 ---------gtactggggcc i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 611295 0 + 2501019 C e micMur3.chr22 3994832 21 - 30143674 I e otoGar3.GL873654 5528845 0 + 5549422 C e canFam3.chr1 4654402 0 - 122678785 C e aotNan1.NW_018505377v1 404453 55 - 4471408 I a score=-19711.000000 s hg38.chr19_GL383574v1_alt 124469 12 + 155864 ----ATTTAT----GTAttt s panTro5.chr19 36192089 12 + 61309027 ----ATTTAT----GTAttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936317 12 + 64411610 ----ATTTAT----GTAttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348027 12 - 8369475 ----atttat----gtattt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945239 16 - 106955855 ----ctttcttttcttttct i nomLeu3.chr10 C 0 C 0 s colAng1.NW_012111697v1 2389931 12 + 4274983 ----ctttct----ttcttt i colAng1.NW_012111697v1 C 0 I 90 s calJac3.chr22 28601196 8 + 49145316 ------TTCT----CTCT-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451107 8 + 8899380 ------Ctct----ctct-- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657750 4 - 2680843 --------------ttct-- i cebCap1.NW_016107633v1 C 0 C 0 s mm10.chr7 111138797 12 - 145441459 ----atttat----gagtgt i mm10.chr7 C 0 C 0 s dasNov3.JH563638 391119 12 + 643850 aaggattgaa----cc---- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 611295 0 + 2501019 C e micMur3.chr22 3994832 21 - 30143674 I e otoGar3.GL873654 5528845 0 + 5549422 C e chlSab2.chr6 29314962 127 + 50890351 I e canFam3.chr1 4654402 0 - 122678785 C e aotNan1.NW_018505377v1 404453 55 - 4471408 I e manLeu1.NW_012102454v1 946918 149 - 2385121 I e cerAty1.NW_012005268v1 5510667 131 + 7714307 I e macNem1.NW_012011689v1 4587074 132 - 13342542 I e macFas5.chr19 34714402 443 + 59248254 I e rheMac8.chr19 30260494 445 + 53671032 I a score=33018.000000 s hg38.chr19_GL383574v1_alt 124481 21 + 155864 atttatttatttt--gagagagg s panTro5.chr19 36192101 21 + 61309027 atttatttatttt--gagagagg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936329 21 + 64411610 atttatttatttt--gagagagg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348039 21 - 8369475 atttatttatttt--gagagagg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945255 21 - 106955855 tttcttttctttc--gagagagg i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28601204 23 + 49145316 CTCTCTGTAttttgagagagaga i calJac3.chr22 C 0 I 4 s saiBol1.JH378197 5451115 21 + 8899380 ctttctttatttt--gagagaga i saiBol1.JH378197 C 0 I 4 s cebCap1.NW_016107633v1 1657754 21 - 2680843 ctctctttatttt--gagagaga i cebCap1.NW_016107633v1 C 0 I 4 s mm10.chr7 111138809 21 - 145441459 atgtgtgccacct--gtgtgtgg i mm10.chr7 C 0 I 113 s dasNov3.JH563638 391131 21 + 643850 ctggaccttgtat--gtgggaag i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 611295 0 + 2501019 C e micMur3.chr22 3994832 21 - 30143674 I e otoGar3.GL873654 5528845 0 + 5549422 C e chlSab2.chr6 29314962 127 + 50890351 I e canFam3.chr1 4654402 0 - 122678785 C e aotNan1.NW_018505377v1 404453 55 - 4471408 I e colAng1.NW_012111697v1 2389943 90 + 4274983 I e manLeu1.NW_012102454v1 946918 149 - 2385121 I e cerAty1.NW_012005268v1 5510667 131 + 7714307 I e macNem1.NW_012011689v1 4587074 132 - 13342542 I e macFas5.chr19 34714402 443 + 59248254 I e rheMac8.chr19 30260494 445 + 53671032 I a score=6980.000000 s hg38.chr19_GL383574v1_alt 124502 2 + 155864 cc s panTro5.chr19 36192122 2 + 61309027 cc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936350 2 + 64411610 cc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348060 2 - 8369475 cc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945276 2 - 106955855 cc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34714845 2 + 59248254 Ct i macFas5.chr19 I 443 C 0 s calJac3.chr22 28601231 2 + 49145316 ct i calJac3.chr22 I 4 C 0 s saiBol1.JH378197 5451140 2 + 8899380 ct i saiBol1.JH378197 I 4 C 0 s cebCap1.NW_016107633v1 1657779 2 - 2680843 ct i cebCap1.NW_016107633v1 I 4 C 0 s aotNan1.NW_018505377v1 404508 2 - 4471408 ct i aotNan1.NW_018505377v1 I 55 C 0 s dasNov3.JH563638 391152 2 + 643850 cc i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 611295 0 + 2501019 C e micMur3.chr22 3994832 21 - 30143674 I e otoGar3.GL873654 5528845 0 + 5549422 C e mm10.chr7 111138830 113 - 145441459 I e chlSab2.chr6 29314962 127 + 50890351 I e canFam3.chr1 4654402 0 - 122678785 C e colAng1.NW_012111697v1 2389943 90 + 4274983 I e manLeu1.NW_012102454v1 946918 149 - 2385121 I e cerAty1.NW_012005268v1 5510667 131 + 7714307 I e macNem1.NW_012011689v1 4587074 132 - 13342542 I e rheMac8.chr19 30260494 445 + 53671032 I a score=3600.000000 s hg38.chr19_GL383574v1_alt 124504 1 + 155864 -c s panTro5.chr19 36192124 1 + 61309027 -c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936352 1 + 64411610 -c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348062 1 - 8369475 -c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945278 1 - 106955855 -c i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30260939 1 + 53671032 -c i rheMac8.chr19 I 445 C 0 s macFas5.chr19 34714847 1 + 59248254 -c i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587206 1 - 13342542 -c i macNem1.NW_012011689v1 I 132 C 0 s chlSab2.chr6 29315089 1 + 50890351 -c i chlSab2.chr6 I 127 C 0 s manLeu1.NW_012102454v1 947067 1 - 2385121 -c i manLeu1.NW_012102454v1 I 149 C 0 s colAng1.NW_012111697v1 2390033 1 + 4274983 -c i colAng1.NW_012111697v1 I 90 C 0 s calJac3.chr22 28601233 1 + 49145316 -c i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451142 1 + 8899380 -c i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657781 1 - 2680843 -c i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404510 1 - 4471408 -c i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 391154 1 + 643850 a- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 611295 0 + 2501019 C e micMur3.chr22 3994832 21 - 30143674 I e otoGar3.GL873654 5528845 0 + 5549422 C e mm10.chr7 111138830 113 - 145441459 I e canFam3.chr1 4654402 0 - 122678785 C e cerAty1.NW_012005268v1 5510667 131 + 7714307 I a score=58952.000000 s hg38.chr19_GL383574v1_alt 124505 5 + 155864 ttgct s panTro5.chr19 36192125 5 + 61309027 ttgct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936353 5 + 64411610 ttgct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348063 5 - 8369475 ttgct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945279 5 - 106955855 tcgct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30260940 5 + 53671032 ttgct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714848 5 + 59248254 ttgct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587207 5 - 13342542 ttgct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510798 5 + 7714307 ttgct i cerAty1.NW_012005268v1 I 131 C 0 s chlSab2.chr6 29315090 5 + 50890351 ttgct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947068 5 - 2385121 ttgct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390034 5 + 4274983 ttgct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601234 5 + 49145316 ttgct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451143 5 + 8899380 ttgct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657782 5 - 2680843 ttgct i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404511 5 - 4471408 ttgct i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 391155 5 + 643850 atgct i dasNov3.JH563638 C 0 I 136 e proCoq1.NW_012149263v1 611295 0 + 2501019 C e micMur3.chr22 3994832 21 - 30143674 I e otoGar3.GL873654 5528845 0 + 5549422 C e mm10.chr7 111138830 113 - 145441459 I e canFam3.chr1 4654402 0 - 122678785 C a score=265377.000000 s hg38.chr19_GL383574v1_alt 124510 28 + 155864 gtgttaccc--aggctggagtgcagtggca s panTro5.chr19 36192130 28 + 61309027 gtgttaccc--aggctggagtgcagtggca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936358 28 + 64411610 gtgttaccc--aggctggagtgcagtggca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348068 28 - 8369475 gtgttaccc--aggctggagtgcagtggca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945284 28 - 106955855 gtgttatgc--aggctggagtgcagtggca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30260945 28 + 53671032 gtgttaccc--aggctgtagtgcagtggca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714853 28 + 59248254 gtgttaccc--aggctgtagtgcagtggca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587212 28 - 13342542 gtgttaccc--aggctgtagtgcagtggca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510803 30 + 7714307 gtgttacccagaggctgtagtgcagtggca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315095 28 + 50890351 gtgttaccc--aggctgtagtgcagtggca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947073 28 - 2385121 gtgttaccc--aggctgtagtgcagtggca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390039 27 + 4274983 gtgtt-ccc--aggctggagtgcagtggca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601239 28 + 49145316 gtgtaaccc--aggctggagtgcagtggca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451148 28 + 8899380 gtgtaaccc--aggctggagtgcagtggca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657787 28 - 2680843 gtgtaatcc--aggctggagtacagtggca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404516 28 - 4471408 gtgtaaccc--aggctggggtgcagtggca i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4654402 7 - 122678785 -----------------------AATAGCA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 611295 0 + 2501019 C e micMur3.chr22 3994832 21 - 30143674 I e dasNov3.JH563638 391160 136 + 643850 I e otoGar3.GL873654 5528845 0 + 5549422 C e mm10.chr7 111138830 113 - 145441459 I a score=839230.000000 s hg38.chr19_GL383574v1_alt 124538 83 + 155864 tgatcatagctcactgcaaccatgaacacctgggcccaagtgatcctcctgcctt-ggccgtctgaagtgttaggattaca-gtg s panTro5.chr19 36192158 83 + 61309027 tgatcatagctcactgcaaccttgaacacctgggcccaagtgatcctcctgcctc-ggccgtctgaagtgttaggattaca-atg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936386 83 + 64411610 tgatcatagctcactgcaaccttgaacacctggacccaagtgatcctcctgcctc-ggccgtctgaagtgttaggattaca-atg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348096 83 - 8369475 tgatcatagctcactgcaaccttgaacacctgggcccaagtgatcctcctgcctc-ggccgtctgaagtgttaggattaca-gtg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945312 83 - 106955855 tgatcatagctcactgcaaccttgaacacctgggcccaaatgatcctcctgcctc-ggccctctgaagtgttaggattaca-gtg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30260973 83 + 53671032 tgatcatagctcactgcaaccttgaactcctgggcccaagtgatcctcctgcctt-ggccctctgaagtgttaggattaca-gcg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714881 83 + 59248254 tgatcatagctcactgcaaccttgaactcctgggcccaagtgatcctcctgcctt-ggccctctgaagtgttaggattaca-gcg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587240 83 - 13342542 tgatcatagctcactgcaaccttgaactcctgggcccaagtgatcctcctgcctt-ggccctctgaagtgttaggattaca-gcg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510833 84 + 7714307 tgatcatagctcactgcaaccttgaactcctgggcccaagtgatcctcctgccttgggccctctgaagtgttaggattaca-gcg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315123 83 + 50890351 tgatcatagctcactgcaaccttgaactcctgggcccaagtgatcctcctgcctt-ggccctctgaagtgttaggattaca-gcg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947101 83 - 2385121 tgatcatagctcactgcaaccttgaactcctgggcccaagtgatcctcctgcctt-ggccctctgaagtgttaggattaca-gcg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390066 83 + 4274983 tgatcatagctcactgcaaccttgaactcctgggcccaagtaatcctcctgcctt-ggccctctgaagtgttaggattaca-gtg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601267 84 + 49145316 tgatcatagctcattgcaaccttgaactcctgggcccaagctatcctcctgcctt-ggccttatgaagtgttaggattacaggta i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451176 84 + 8899380 tgatcatagctcactgcaaccttgaactcctggacccaagctatcctcctgcctt-ggccttctgaggtgttaggattacaggca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657815 84 - 2680843 tgatcgtagcttactgcaaccttgaactcctgggcccaagctatcctcctgcctt-ggccttctgaagtgttaggattacaggca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404544 84 - 4471408 tgatcatagctcactgcaaccttgaactcctgggcccaagctatcctcctgcctt-ggccttctgaagtgttaggattacaggca i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 611295 0 + 2501019 C e micMur3.chr22 3994832 21 - 30143674 I e dasNov3.JH563638 391160 136 + 643850 I e otoGar3.GL873654 5528845 0 + 5549422 C e mm10.chr7 111138830 113 - 145441459 I e canFam3.chr1 4654409 0 - 122678785 C a score=12376.000000 s hg38.chr19_GL383574v1_alt 124621 1 + 155864 t s panTro5.chr19 36192241 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936469 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348179 1 - 8369475 t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945395 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261056 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714964 1 + 59248254 t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587323 1 - 13342542 t i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510917 1 + 7714307 t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315206 1 + 50890351 t i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947184 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390149 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601351 1 + 49145316 t i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451260 1 + 8899380 t i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657899 1 - 2680843 t i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404628 1 - 4471408 t i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111138943 1 - 145441459 t i mm10.chr7 I 113 C 0 e proCoq1.NW_012149263v1 611295 0 + 2501019 C e micMur3.chr22 3994832 21 - 30143674 I e dasNov3.JH563638 391160 136 + 643850 I e otoGar3.GL873654 5528845 0 + 5549422 C e canFam3.chr1 4654409 0 - 122678785 C a score=165726.000000 s hg38.chr19_GL383574v1_alt 124622 17 + 155864 gagccaccagacctgac s panTro5.chr19 36192242 17 + 61309027 gagccaccagacctgac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936470 17 + 64411610 gagccaccagacctgac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348180 17 - 8369475 gagccaccaGACGTGAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945396 17 - 106955855 gagccaccacacctgac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261057 17 + 53671032 gagccaccacacctggc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714965 17 + 59248254 gagccaccacacctggc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587324 17 - 13342542 gagccaccacacctggc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510918 16 + 7714307 gagccaccacacct-gC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315207 17 + 50890351 gagccaccacacctggc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947185 17 - 2385121 gagccaccacacctggc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390150 17 + 4274983 gagccaccacacctgac i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601352 17 + 49145316 gagtcaccacacctggc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451261 17 + 8899380 gagtcaccacacctggc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657900 17 - 2680843 gagtcaccacacctggc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404629 17 - 4471408 gagtcaccacacctggc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5528845 7 + 5549422 GAGCCAC---------- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111138944 17 - 145441459 gagccatttttccggcc i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 611295 0 + 2501019 C e micMur3.chr22 3994832 21 - 30143674 I e dasNov3.JH563638 391160 136 + 643850 I e canFam3.chr1 4654409 0 - 122678785 C a score=71746.000000 s hg38.chr19_GL383574v1_alt 124639 7 + 155864 CTTTGTT s panTro5.chr19 36192259 7 + 61309027 CTTTGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936487 7 + 64411610 CTTTGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348197 7 - 8369475 CTTTGTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945413 7 - 106955855 CTTTGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261074 7 + 53671032 ccttgtt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714982 7 + 59248254 CCTTGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587341 7 - 13342542 CCTTGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510934 7 + 7714307 CCTTGTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315224 7 + 50890351 CCTTGTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947202 7 - 2385121 CCTTGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390167 7 + 4274983 CCTTGTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601369 6 + 49145316 CC-TGTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451278 7 + 8899380 CCTTGTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657917 7 - 2680843 CCTTGTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404646 7 - 4471408 CCTTGTT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 611295 7 + 2501019 CTTTGTT i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111138961 3 - 145441459 ----cTT i mm10.chr7 C 0 C 0 e micMur3.chr22 3994832 21 - 30143674 I e dasNov3.JH563638 391160 136 + 643850 I e otoGar3.GL873654 5528852 0 + 5549422 C e canFam3.chr1 4654409 0 - 122678785 C a score=19130.000000 s hg38.chr19_GL383574v1_alt 124646 2 + 155864 TT- s panTro5.chr19 36192266 2 + 61309027 TT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936494 2 + 64411610 TT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348204 2 - 8369475 TT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945420 2 - 106955855 TT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261081 2 + 53671032 tt- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714989 2 + 59248254 TT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587348 2 - 13342542 TT- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510941 2 + 7714307 TT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315231 2 + 50890351 TT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947209 2 - 2385121 TT- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390174 2 + 4274983 TT- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601375 2 + 49145316 TT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451285 2 + 8899380 TT- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657924 2 - 2680843 TT- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404653 2 - 4471408 TT- i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 611302 2 + 2501019 TT- i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111138964 2 - 145441459 CT- i mm10.chr7 C 0 C 0 s dasNov3.JH563638 391296 2 + 643850 -TA i dasNov3.JH563638 I 136 C 0 e micMur3.chr22 3994832 21 - 30143674 I e otoGar3.GL873654 5528852 0 + 5549422 C e canFam3.chr1 4654409 0 - 122678785 C a score=355678.000000 s hg38.chr19_GL383574v1_alt 124648 29 + 155864 GTTT-TAGTAGCTACCTCTT-GACTAGAAAA s panTro5.chr19 36192268 29 + 61309027 GTTT-TAGTAGCTACCTCTT-GACTAGAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936496 29 + 64411610 GTTT-TAGTAGCTACCTCTT-GACTAGAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348206 29 - 8369475 GTTT-TAGTAGCTACCTCTT-GACTAGAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945422 29 - 106955855 GTTT-TGGTAGCTACCTCTT-GACTAGAAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261083 29 + 53671032 gttt-tagtagCTACCTGTT-GACTAGAAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34714991 29 + 59248254 GTTT-TAGTAGCTACCTGTT-GACTAGAAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587350 29 - 13342542 GTTT-TAGTAGCTACCTGTT-GACTAGAAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510943 30 + 7714307 GTTT-TAGTAGCTACCTGTTGGACTAGAAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315233 29 + 50890351 GTTT-TAGTAGCTACCTGTT-GACTAGAAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947211 29 - 2385121 GTTT-TAGTAGCTACCTGTT-GACTAGAAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390176 29 + 4274983 GTTT-TAGTAGCTACCTGTT-GACTAGAAAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601377 29 + 49145316 GTTT-TAGTAACTACCTCTT-GACTAGAAAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451287 29 + 8899380 GTTT-TAGTAGCTACCTCTT-GACTAGAAAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657926 29 - 2680843 GTTT-TAGTAACTACCTCTT-GACTAGAAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404655 29 - 4471408 GTTT-TAGTAGCTACCTCTT-GACTAGAAAA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 611304 30 + 2501019 GTTTCTAGTAGCCACTTCCT-ACCTAGACAG i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111138966 20 - 145441459 GTCA-TG---------TCTT-GGCTAGAAAA i mm10.chr7 C 0 I 3 s canFam3.chr1 4654409 28 - 122678785 GTTT-TAGTAATCATTTCTT-GAACTAATA- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 391298 29 + 643850 GTTT-TCATTGCCACTTCGT-GACTAGAGAA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3994832 21 - 30143674 I e otoGar3.GL873654 5528852 0 + 5549422 C a score=279255.000000 s hg38.chr19_GL383574v1_alt 124677 16 + 155864 --ATAGTTTAATCTTGGC s panTro5.chr19 36192297 16 + 61309027 --ATAGTTTAATCTTGGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936525 16 + 64411610 --ATAGTTTAATCTTGGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348235 16 - 8369475 --ATAGTTTAATCTTGGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945451 16 - 106955855 --GTAGTTTAATCTTGGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261112 16 + 53671032 --ATAGTTTAATCTTGGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715020 16 + 59248254 --ATAGTTTAATCTTGGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587379 16 - 13342542 --ATAGTTTAATCTTGGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5510973 16 + 7714307 --ATAGTTTAATCTTGGC i cerAty1.NW_012005268v1 C 0 I 324 s chlSab2.chr6 29315262 16 + 50890351 --ATAGTTTAATCTTGGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947240 16 - 2385121 --ATAGTTTAATCTTGGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390205 16 + 4274983 --GTAGTTTAATCTTGGC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601406 16 + 49145316 --ATAGTTTAATCTTGGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451316 16 + 8899380 --ATAGTTTAATCTTGGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657955 16 - 2680843 --ATAGTTTAATTTTGGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404684 16 - 4471408 --ATAGTTTAATCTTGGC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3994853 16 - 30143674 --ATAGTTTAATCTTGGC i micMur3.chr22 I 21 C 0 s proCoq1.NW_012149263v1 611334 16 + 2501019 --ATAGTTTAATCTTGGC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5528852 11 + 5549422 -------TTAATCTTGGC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111138989 16 - 145441459 --GTAAGTTAGTCGTGAC i mm10.chr7 I 3 C 0 s canFam3.chr1 4654437 14 - 122678785 --ATAA--TAATCTTGGC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 391327 18 + 643850 AAGTAGTTTAATCTTGAC i dasNov3.JH563638 C 0 C 0 a score=110463.000000 s hg38.chr19_GL383574v1_alt 124693 6 + 155864 CTCCTT s panTro5.chr19 36192313 6 + 61309027 CTCCTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936541 6 + 64411610 CTCCTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348251 6 - 8369475 CTCCTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945467 6 - 106955855 CTCCTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261128 6 + 53671032 CTCCTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715036 6 + 59248254 CTCCTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587395 6 - 13342542 CTCCTT i macNem1.NW_012011689v1 C 0 C 0 s chlSab2.chr6 29315278 6 + 50890351 CTCCTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947256 6 - 2385121 CTCCTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390221 6 + 4274983 CTCCTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601422 6 + 49145316 CTCCTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451332 6 + 8899380 CTCCTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657971 6 - 2680843 CTCCTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404700 6 - 4471408 CTCCTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3994869 6 - 30143674 CTCCTT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 611350 6 + 2501019 CTCCTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5528863 6 + 5549422 CTCCCT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111139005 6 - 145441459 CTCCCT i mm10.chr7 C 0 C 0 s canFam3.chr1 4654451 6 - 122678785 CTTCTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 391345 6 + 643850 TTCCTT i dasNov3.JH563638 C 0 C 0 e cerAty1.NW_012005268v1 5510989 324 + 7714307 I a score=271655.000000 s hg38.chr19_GL383574v1_alt 124699 17 + 155864 AAAACCTTTTCATTGAT s panTro5.chr19 36192319 17 + 61309027 AAAACTTTTTCATTGAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936547 17 + 64411610 AAAACTTTTTCATTGAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348257 17 - 8369475 AAAACTTTTTCATTGAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945473 17 - 106955855 AAAACTTTTTCATTGGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261134 17 + 53671032 AAAACTTTTTCATTGAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715042 17 + 59248254 AAAACTTTTTCATTGAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587401 17 - 13342542 AAAACTTTTTCATTGAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5511313 17 + 7714307 AAAACTTTTTCATTGAT i cerAty1.NW_012005268v1 I 324 C 0 s chlSab2.chr6 29315284 17 + 50890351 AAAACTTTTTCATTGAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947262 17 - 2385121 AAAACTTTTTCATTGAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390227 17 + 4274983 AAAACTTTTTCATTGAt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28601428 17 + 49145316 AAAACTTTTTCATTGAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451338 17 + 8899380 AAAGCTTTTTCATTCAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657977 17 - 2680843 AAAACTTTTTCATTGAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404706 17 - 4471408 AAAACTTTTTCATTGAT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3994875 17 - 30143674 AAAACTTTTTAATTGAT i micMur3.chr22 C 0 I 226 s proCoq1.NW_012149263v1 611356 17 + 2501019 AGAACTTTTTCATTGAt i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5528869 17 + 5549422 AAAACTTTCTCATTGAG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111139011 15 - 145441459 --AGACTTTCCATGGAC i mm10.chr7 C 0 C 0 s canFam3.chr1 4654457 16 - 122678785 -AAAACTTTTCACTGAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 391351 13 + 643850 AAAACTCTTTGAC---- i dasNov3.JH563638 C 0 C 0 a score=22688.000000 s hg38.chr19_GL383574v1_alt 124716 4 + 155864 -ATTT s panTro5.chr19 36192336 4 + 61309027 -ATTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936564 4 + 64411610 -ATTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348274 3 - 8369475 --TTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945490 4 - 106955855 -ATTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261151 4 + 53671032 -ATTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715059 4 + 59248254 -ATTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587418 4 - 13342542 -ATTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5511330 4 + 7714307 -ATTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315301 4 + 50890351 -ATTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947279 4 - 2385121 -ATTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390244 4 + 4274983 -attt i colAng1.NW_012111697v1 C 0 I 314 s calJac3.chr22 28601445 4 + 49145316 -ATTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451355 4 + 8899380 -ATTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657994 4 - 2680843 -ATTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404723 4 - 4471408 -ATTT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 611373 3 + 2501019 --ttt i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5528886 3 + 5549422 --TCT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111139026 1 - 145441459 ----T i mm10.chr7 C 0 I 3 s canFam3.chr1 4654473 4 - 122678785 -ATTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 391364 4 + 643850 CATT- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3994892 226 - 30143674 I a score=28125.000000 s hg38.chr19_GL383574v1_alt 124720 3 + 155864 TTT- s panTro5.chr19 36192340 3 + 61309027 TTT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936568 3 + 64411610 TTT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348277 3 - 8369475 TTT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945494 3 - 106955855 TTT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261155 3 + 53671032 CTT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715063 3 + 59248254 CTT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587422 3 - 13342542 CTT- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5511334 3 + 7714307 CTT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315305 3 + 50890351 CTT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947283 3 - 2385121 CTT- i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28601449 3 + 49145316 TTT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451359 3 + 8899380 TTT- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1657998 3 - 2680843 TTT- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404727 3 - 4471408 TTT- i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 611376 3 + 2501019 ttt- i proCoq1.NW_012149263v1 C 0 I 349 s otoGar3.GL873654 5528889 3 + 5549422 TTT- i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111139030 3 - 145441459 TGT- i mm10.chr7 I 3 C 0 s canFam3.chr1 4654477 3 - 122678785 TTT- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 391368 3 + 643850 -TTA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3994892 226 - 30143674 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=234116.000000 s hg38.chr19_GL383574v1_alt 124723 30 + 155864 ACTCTG--CTAGAA----C------AGTT---C----------AGTTTTTGCATG s panTro5.chr19 36192343 30 + 61309027 ACTCTG--CTAGAA----C------AGTT---C----------AGTTTTTGCATG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936571 30 + 64411610 ACTCTG--CTAGAA----C------AGTT---C----------AGTTTTTGCATG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348280 30 - 8369475 ACTCTG--CTAGAA----C------AGTT---C----------AGTTTTTGCATG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945497 30 - 106955855 ATTCTG--CTAGAA----C------AGTT---C----------AGTTTTTGCATG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261158 30 + 53671032 ACTCTG--CTAGAA----C------AGTT---C----------AGTTTTTGCATG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715066 30 + 59248254 ACTCTG--CTAGAA----C------AGTT---C----------AGTTTTTGCATG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587425 30 - 13342542 ACTCTG--CTAGAA----C------AGTT---C----------AGTTTTTGCATG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5511337 30 + 7714307 ACCCTG--CTAGAA----C------AGTT---C----------AGTTTTTGCATG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315308 30 + 50890351 ACTCTG--CTAGAA----C------AGTT---C----------AGTTTTTGCATG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947286 30 - 2385121 ACCCTG--CTAGAA----C------AGTT---C----------AGTTTTTGCATG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28601452 29 + 49145316 ACTCTG--CTAGAA-----------AGAT---C----------AGTTTTTGTATG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451362 28 + 8899380 ATTCTG--CTAGAA-----------AGAG--------------AGTTTTTGCATG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1658001 24 - 2680843 ATTCTG--CTAGAC-----------------------------AGTTTTTGCATG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404730 29 - 4471408 ACTCTG--CTAGAA-----------AGTT---C----------AGTTTTTGCATG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5528893 40 + 5549422 TCTCTA--ATGAAA----A------TGTT---AACATGACAGGAGTTATAGCATG i otoGar3.GL873654 I 1 I 2 s mm10.chr7 111139033 37 - 145441459 GTGCTG--ATAAGATTCAC------ATTTTAGC----------AGTCTGTGTGTT i mm10.chr7 C 0 I 2 s canFam3.chr1 4654480 35 - 122678785 ACTCAGCACTTTAA----T------GTTT---CTGG-------AGTTTTTGCGTG i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 391371 39 + 643850 ATTCTG--ATAGGA----CTTTAATATTT---TAGG-------AGTTTTTGCAGG i dasNov3.JH563638 C 0 I 2 e proCoq1.NW_012149263v1 611379 349 + 2501019 I e micMur3.chr22 3994892 226 - 30143674 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=505912.000000 s hg38.chr19_GL383574v1_alt 124753 49 + 155864 TCTTCAAGTGAACATGCTTTAGTATTAATTCCATGGAAGCCATTTCTGT s panTro5.chr19 36192373 49 + 61309027 TCTTCAAGTGAACATGCTTTAGTATTAATTCCATGGAAGCCATTTCTGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936601 49 + 64411610 TCTTCAAGTGAACATGCTTTAGTATTAATTCCATGGAAGCCATTTCTGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348310 49 - 8369475 TCTTCAAGCGAACATGCTTTAGTATTAATTCCATGGAAGCCATTTCTGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945527 49 - 106955855 TGTTCAAGTGAACATGCTTTAGTATTAATTCCATGGAAGCCATTTCTGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261188 43 + 53671032 TCTTCAAGTGAACATGCTTTAGTATTAATTCCTTGGAATTAAT------ i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715096 43 + 59248254 TCTTCAAGTGAACATGCTTTAGTATTAATTCCTTGGAATTAAT------ i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587455 43 - 13342542 TCTTCAAGTGAACATGCTTTAGTATTAATTCCTTGGAATTAAT------ i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5511367 43 + 7714307 TCTTCAAGTGAACATGCTTTAGTATTAATTCCTTGGAATTAAT------ i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315338 43 + 50890351 TCTTCAAGTGAACATGCTTTAGTATTAATTCCTTGGAATTAAT------ i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947316 43 - 2385121 TCTTCAAGTGAACATGCTTTAGTATTAATTCCTTGGAATTAAT------ i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28601481 49 + 49145316 TCTTCAAGTGAACGTGCTTTAATATTAATACCTTGGAAGCCATTTCTGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451390 49 + 8899380 TCTTCAAGTGAACATGCTTCAGTATTAATACCTTGGAAGCCATTTCTGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1658025 49 - 2680843 TCTTCAAGTGAACATGGTTTAGTATTAATACCTTGGAAGCCATTTCTGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404759 49 - 4471408 TCTTCAAGTGAACATGCTTTAGTATTAATACCTTGGAAGCCATTTCTGT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3995118 49 - 30143674 TCTTCAAATGAAGATACTTTTGTATGAATTCCTTGGAAGCCATTTCTGT i micMur3.chr22 I 226 I 11 s otoGar3.GL873654 5528935 49 + 5549422 TCTTCAAATTAAGGTACTTTTCTATTAATTCCTTGGAAGCCATTTCTGT i otoGar3.GL873654 I 2 C 0 s mm10.chr7 111139072 35 - 145441459 TTTTTGAATTAACATGCTTTAGCATTCATTTC--------CAT------ i mm10.chr7 I 2 C 0 s canFam3.chr1 4654517 39 - 122678785 TCTTTAAATTAACGTGCTT-AGTATTAATTCCTTGGCTGT--------- i canFam3.chr1 I 2 C 0 s dasNov3.JH563638 391412 48 + 643850 TCTTCAAATTAACATTTGTTAGTGTTAATTCTTTGGGAGC-ATTTCTGT i dasNov3.JH563638 I 2 C 0 e proCoq1.NW_012149263v1 611379 349 + 2501019 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=161305.000000 s hg38.chr19_GL383574v1_alt 124802 22 + 155864 AGAATAGGCTAGTGTCCAGTTT s panTro5.chr19 36192422 22 + 61309027 AGAATAGGCTAGTGTCCAGTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936650 22 + 64411610 AGAATAGGCTAGTGTCCAGTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348359 22 - 8369475 AGAGTAGGCTAGTGTCCAGTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945576 22 - 106955855 AGAATAGGCTAGTGTCCAGTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261231 15 + 53671032 -------ACTTGGGTCCAGTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715139 15 + 59248254 -------ACTTGGGTCCAGTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587498 15 - 13342542 -------ACTTGGGTCCAGTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5511410 15 + 7714307 -------ACTTGAGTCCAGTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315381 15 + 50890351 -------ACTTGGGTCCAGTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947359 15 - 2385121 -------ACTTGAGTCCAGTTT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28601530 22 + 49145316 AGAATAGGCTAGTGTCCAATTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451439 22 + 8899380 AGAATAGGCTAGTGTCCAATTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1658074 22 - 2680843 AGAATAGGCTAGTGTCCAATTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404808 22 - 4471408 AGAATAGGCTAGTATCCAATTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5528984 21 + 5549422 AGAATAGGCTC-TGTCTAACTC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111139107 20 - 145441459 GTAATAG--TTGGGTCTGGCGT i mm10.chr7 C 0 C 0 s canFam3.chr1 4654556 22 - 122678785 ATAATAGGCTAGTGTTCAGTTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 391460 22 + 643850 GTAACAGGCTATTGTTCAGTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 611379 349 + 2501019 I e micMur3.chr22 3995167 11 - 30143674 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=991822.000000 s hg38.chr19_GL383574v1_alt 124824 77 + 155864 TGTCCA-GTTTTCCTTTTGGAGCAGTGTCTCAGGCACAG-AAATAGTCTGGGCTTGGTGGACCCCACCCCAAAGTGTCA s panTro5.chr19 36192444 77 + 61309027 TGCCCA-GTTTTCCTTTTGGAGCAGTGTCTCAGGCACAG-AAATAGTCTGGGCTTGGTGGACCCCACCCCAAAGTGTCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936672 77 + 64411610 TGCCCA-GTTTTCCTTTTGGAGCAGTGTCTCAGGCACAG-AAATAGTCTGGGCTTGGTGGACCCCACCCCAAAGTGTCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348381 77 - 8369475 TGTCCA-GTTTTCCTTTTGGAGCAGTGTCTCAGGCACAG-AAATAGTCTGGGCTTGGTGGACCCCACCCCAAAGTGTCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945598 77 - 106955855 TGTCCA-GTTTTCCTTTTGGAGCAGTGTCTCAGGCACAG-AAATAGTCTGGGCTTGGTGGACCCCACCCCAAAGTGTCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261246 77 + 53671032 TGTCCA-ATTTTCCTTTTGGAGCAGTGTTTCAGGCACAG-AAATAGTCTGGGCTTGGTGGACCCCACCCCAAAGTGTCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715154 77 + 59248254 TGTCCA-ATTTTCCTTTTGGAGCAGTGTTTCAGGCACAG-AAATAGTCTGGGCTTGGTGGACCCCACCCCAAAGTGTCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587513 77 - 13342542 TGTCCA-GTTTTCCTTTTGGAGCAGTGTTTCAGGCACAG-AAATAGTCTGGGCTTGGTGGACCCCACCCCAAAGTGTCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5511425 77 + 7714307 TGTCCA-GTTTTCCTTTTGGAGCAGTGTTTCAGGCACAG-AAATAGTCTGGGCTTGGTGGACCCCACCCCAAAGTGTCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315396 77 + 50890351 TGTCCA-ATTTTCCTTTTGGAGCAGTGTTTCAGGCACAG-AAATAGTCTGGGCTTGGTGGACCCCACCCCAAAGTGTCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947374 77 - 2385121 TGTCCA-GTTTTCCTTTTGGAGCAGTGTTTCAGGCACAG-AAATAGTCTGGGCTTGGTGGACCCCACCCCAAAGTGTCA i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28601552 77 + 49145316 TGTCCC-ATTTTCCTTTTGGTGCAGTGTCTCAGGCACAG-AAATAGTCTGGGCTTGGTGGACCCCACCCCAAAATGTCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451461 77 + 8899380 TGTCCC-ATTTTCCTTTTGAAGCAGTGTCTCAGGCTCAG-AAATAGTCTGGGCTTGGTGGACCCCACCCCAAAGTGTCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1658096 77 - 2680843 TGTCCC-ATTTTCCTTTTGGAGCAGTGTCTCAGGCACAG-AAATAGTCTGGGCTTGGTGGACCCCACCCCAAAGTGTCA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404830 77 - 4471408 TGTCCC-ATTTTCCTTTTGGAGCAGTGTCTCAGGCACAG-AAATAGTCTGGGCTTCGTGGACCCCACCCCAAAGTGTCA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3995178 72 - 30143674 TGTCCA-GTTTCTCTTTCAGAGCGGTCTCCCAGACACAG-AAACAGTCCGGGCTTGGTGG-----GCCCACAAGTGTTG i micMur3.chr22 I 11 C 0 s otoGar3.GL873654 5529005 69 + 5549422 TGTCCA-GTTTTTC-TTCTGGGTGG--TCCCAGGCACAG-AAATAGTCTGGACTTGGTGG-----GCCCAGAGGTGTTG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111139127 73 - 145441459 TGTTCA-GTTTTTCTGTTAAGACAGCTTCTTGTGAACAGAAAATGCTATGGGCTTGGTAG-----ACACAGAAGAGTCA i mm10.chr7 C 0 C 0 s canFam3.chr1 4654578 71 - 122678785 TGCACA-TATTTTTCTTTGGGACAGTCTCT-GGGCACAG-AAATAATCTGGGCTTGGTGG-----ACCCAGAACTGTCA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 391482 73 + 643850 TGCACACGTATTTCTTTTGGGGCATTCTCCCAGACACAG-AAATAATCTGGGTTTGCTGG-----ACTCAGAATTGTCA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 611379 349 + 2501019 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=5688097.000000 s hg38.chr19_GL383574v1_alt 124901 343 + 155864 CTTCTTTTCCTCTGGCCTT-GCTCTCCATGCCCGCCTTTCTCTTCTGATGTTTTAATGATAC-CCTCCCTGCTCGGTGATTTGTGTTCAGGAAGCTAGGCAGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACCGCAGTTGCACAGGAAATGAGGCGGCTCCTGGCTGGCTGCTGCTAAGCAGTGATTTTAGGTGGCAGAGGACAAGGCCTCAGGGCCTGAGCCATTTAAGGCATTTTCCACCTTAATCTTTTCACTACCTTCTTCCTCTAGGAGTCATAGGAACATGATTTTGTGATTGGGTTGAGGTGACATCATGTCCTC--- s panTro5.chr19 36192521 343 + 61309027 CTTCCTTTCCTCTGGCCTT-GCTCTCCATGCCCGCCTTTCTCTTGTGATGTTTTAATGATAC-CCTCCCTGCTCGGTGATTTGTGTTCAGGAAGCTAGGCAGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACCGCAGTTGCACAGGAAATGAGGCGGCTCCTGGCTGGCTGCTGCTAAGCAGTGATTTTAGGTGGCAGAGGACAAGGCCTCAGGGCTTGAGCCATTTAAGGCATTTTCCACCTTAATCTTTTCACTACCTTCTTCCTCTAGGAGTCATAGGAACATGATTTTGTGATTGGGTTGAGGTGACATCATGTCCTC--- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39936749 343 + 64411610 CTTCCTTTCCTCTGGCCTT-GCTCTCCATGCCCGCCTTTCTCTTGTGATGTTTTAATGATAC-CCTCCCTGCTCGGTGATTTGTGTTCAGGAAGCTAGGCAGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACTGCAGTTGCACAGGAAATGAGGCGGCTCCTGGCTGGCTGCTGCTAAGCAGTGATTTTAGGTGGCAGAGGACAAGGCCTCAGGGCCTGAGCCATTTAAGGCATTTTCCACCTTAATCTTTTCACTACCTTCTTCCTCTAGGAGTCATAGGAACATGATTTTGTGATTGGGTTGAGGTGACATCATGTCTTC--- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348458 343 - 8369475 CTTCCTTTCCTCTGGCCTT-GCTCTCCATGCCCGCCTTTCTCTTGTGATGTTTTAATGATAC-CCTCCCTGCTCGGTGATTTGTGTTCAGGAAGCTAGGCAGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACCGCAGTTGCACAGGAAATGAGGCGGCTCCTGGCCGGCTGCTGCTAAGCAGTGATTTTAGGTGGCAGAGGACAAGGCCTCAGGGCCTGAGCCATTTAAGGCATTTTCCACCTTAATCTTTTCACTACCTTCTTCCTCTAGGAGTCATAGGAGCATGATTTTGTGATTGGGTTGAGGTGACATCATGTCCTC--- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63945675 343 - 106955855 CTTCCTTTCCTCTGGCCTT-GCTCTCCGTGCCCGCCTTTCTCTTGTGATGTTTTAATGATAC-CCTCCCTGCTCAGTGATTTGTGTTCAGGAAGCTAGGCAGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACCGCAGTTGCACAGGAAATGAGGTGGCTCCTGGCTGGCTGCTGCTAAGCAGTGATTTTAGGTGGCAGAGGACAAGGCCTTAGGGCCTGAGCCATTTAAGGCATTTTCCACCTTAGTCTTTTCACTACCTTCTTCCTCTAGGAGTCATAGGAACATGATTTTGTGATTGGGTTGAGGTGACATCATGTCCTC--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261323 343 + 53671032 CTTCCTTTCCTCTGGCCTT-GCTCTCCATGCCCGCCTTTCTCTTGTGATGTTTTAATGATAC-CCTCCCTGCTCGGTGATTTGTGTTCAGGAAGCTAGGCAGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACCGCAGTTGCACAGGAAATGAGGCGGCTCCTGGCTGGCTGCTGCTAAGCAGTGATTTTAGGTGGCAGAGGACAAGGCCTTAGGGCCTGAGCCATTTAAGACATTTTCCACCTTAGTCTTTTCACTACCTTCTTCCTCTGGGAGTCATAGGAACATGATTTTATGATTGGGTTGAAGTGACATCATGTCCTC--- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715231 343 + 59248254 CTTCCTTTCCTCTGGCCTT-GCTCTCCATGCCCGCCTTTCTCTTGTGATGTTTTAATGATAC-CCTCCCTGCTCGGTGATTTGTGTTCAGGAAGCTAGGCAGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACCGCAGTTGCACAGGAAATGAGGCGGCTCCTGGCTGGCTGCTGCTAAGCAGTGATTTTAGGTGGCAGAGGACAAGGCCTTAGGGCCTGAGCCATTTAAGGCATTTTCCACCTTAGTCTTTTCACTACCTTCTTCCTCTGGGAGTCATAGGAACATGATTTTATGATTGGGTTGAAGTGACATCATGTCCTC--- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587590 343 - 13342542 CTTCCTTTCCTCTGGCCTT-GCTCTCCATGCCCGCCTTTCTCTTGTGATGTTTTAATGATAC-CCTCCCTGCTCGGTGATTTGTGTTCAGGAAGCTAGGCAGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACCGCAGTGGCACAGGAAATGAGGCGGCTCCTGCCTGGCTGCTGCTAAGCAGTGATTTTAGGTGGCAGAGGACAAGGCCTTAGGGCCTGAGCCATTTAAGGCATTTTCCACCTTAGTCTTTTCACTACCTTCTTCCTCTGGGAGTCATAGGAACATGATTTTATGATTGGGTTGAAGTGACATCATGTCCTC--- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5511502 343 + 7714307 CTTCCTTTCCTCTGGCCTT-GCTCTCCATGCCCTCCTTTCTCTTGTGATGTTTTAATGATAC-CCTCCCTGCTCGGTGATTTGTGTTCAGGAAGCTAGGCAGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACCGCAGTTGCACAGGAAATGAGGCGGCTCCTGGCTGGCTGCTGCTAAGCAGTGATTTTAGGTGGCAGAGGACAAGGCCTTAGGGCCTGAGCCATTTAAGGCATTTTCCACCTTAGTCTTTTCACTACCTTCTTCCTCTGGGAGTCATAGGAACATGATTTTGTGATTGGGTTGAAGTGACATCATGTCCTC--- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315473 343 + 50890351 CTTCCTTTCCTCTGGCCTT-GCTCTCCATGCCCGCCTTTCTCTTGTGATGTTTTAATGATAC-CCTCCCTGCTCGGTGATTTGTGTTCAGGAAGCTAGGCAGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACCGCAGTTGCACAGGAAATGAGGCGGCTCCTGGCTGGCTGCTGCTAAGCAGTGATTTTAGGTGGCAGAGGACAAGGCCTTAGGGCCTGAGCCATTTAAGGCATTTTCCACCTTAGTCTTTTCACTACCTTCTTCCTCTGGGAGTCATAGGAACATGATTTTGTGATTGGGTTGAAGTGACATCATGTCCTC--- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947451 343 - 2385121 CTTCCTTTCCTCTGGCCTT-GCTCTCCATGCCCTCCTTTCTCTTGTGATGTTTTAATGATAC-CCTCCCTGCTCGGTGATTTGTGTTCAGGAAGCTAGGCAGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACCGCAGTTGCACAGGAAATGAGGCGGCTCCTGGCTGGCTGCTGCTAAGCAGTGATTTTAGGTGGCAGAGGACAAGGCCTTAGGGCCTGAGCCATTTAAGGCATTTTCCACCTTAGTCTTTTCACTACCTTCTTCCTCTGGGAGTCATAGGAACATGATTTTGTGATTGGGTTGAAGTGACATCATGTCCTC--- i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28601629 342 + 49145316 CTTCCTTTCCTCTGGCCTT-GCTCTCCATGCCTGCCTTTCTGTCCTGATGTTTTAATGATAC-CCTCCCTGCTCAGTGATTTGTGTTCAGGAAGCTAGGCAGTGATTAC-TTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACTGCAGTTGCACAGGAAATGAGGCGGCTCCTGGCTGGCTGCTGCTAAGCACTGATTTTAGGTGGCAGAGGACAAGGCCTTAGGGCCTGAGCCATTTAAGGCACTTTCCACTTTAGTCTTTTCACTACCGTCTTCCTCTGGGAATCATAGGAACATGATTTTGTGATTGGGTTGAGGTGACATCATGTCCTC--- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451538 342 + 8899380 CTTCCTTTCCTCTGGCCTT-GCTCTCCATGCCCGCCTTTCTGTCGTGATGTTTTAATGATAC-CCTCCCTGCTTAGTGATTTGTATTCAGGAAGCTAGGCAGTGATTAC-TTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACTGCAGTTGCACAGGAAATGAGGCGACTGCTGGCTGGCTGCTGCTAAGCACTGATTTTAGGTGGCAGAGGACAAGGCCTTAGGGCCTGAGCCATTTAAGGCATTTTCCAGTTTAGTCTTTTCACTACCTTCTTCCTCTGGGAATCATAGGAACATGATTTTGTGATTGGATTGAGGTGACATCATGTCCTC--- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1658173 342 - 2680843 CTTCCTTTCCTCTGGCCTT-GCTCTCCATGCCCGCCTTTCTGTCATGATGTTTTAATGATAC-CCTCCCTGCTCAGTGATTTGTGTTCAGGAAGCTAGGCAGCGATTAC-TTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACTGCAGTTGCACAGGAAATGAGGCAGCTCCTGGCTGGCTGCTGCTAAGCACTGATTTTAGGTGGCAGAGGACAAGGCCTCAGGGCCTAAGCCATTTAAGGCATTTTCTAGTTTCGTCTTTTCACTACCTTCTTCCTCTGGGAATCATAGGAACATGATTTTGTGATTGAGTTGAGGTGACATCATGTCCTC--- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 404907 341 - 4471408 CTTCCTTTCCTCTGGCCTT-GTTCTCCATGCCTGCCTTTCTGTCGTGATGTTTTAATGATAC-CCTCCCTGCTCAGTGATTTGTGTTCAGGAAGCTAGGCAGTGATTAC-TTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACTGCAGTTGCACAGGAAATGAGGTGGCTCCTGGCTGGCTGCTGCTAAGCACTGATTTTAGGTGGCAGAGGACAAGGCCTTAGGGCCTGAGCCATTTAAGGCATTTTCCAGTTTAGTC-TTTCACTACCTTCTTCCTCTGGGAATCATAGGAACATGATTTCATGATTGGGTTGAGGTGACATCATGTCTTC--- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3995250 343 - 30143674 CTTCCTTTCCCCTGGCCTTGGCTCCCAGTGCCTGCCTTTCCGTTTTGATGTTTTAATGATAC-CCTCCCTACGCAGGGATTTGTGTAAAGGAAGCAAGGCAGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACCACAGTTGCACAGGAAATGAGGTGGTTCCTGGCTGGCTGCTGCTAAGCTATGATACTAGGTGGCAGAGGACAAGGCTTTAGGGTCTGAGCCACTTAAAACATTCTCCACCTTTGTCTTTTTACTACCTT-TTCCTCTAGGAGTCATAGGAAAACAATTTTGTGATTGGGTTGAGATGACGTCATATCCTC--- i micMur3.chr22 C 0 I 20 s proCoq1.NW_012149263v1 611728 342 + 2501019 CTTCCTTTCCTCTGGCCTTGGCTCCCAGTGTCTGCCTTTCCGTTTTGATGTTTTAATGATAC-CCTCCCTACGCAGGGATTTGTGTAAAGGAAGCAAGGCAGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACCACAGTTGCACAGGAAATGAGGCGGCTCCTGGCTGGCTGCTGCCAAGCACTGATTTTAGGTGG-AGAGGACAAGGCCTTAAGGTCTGAGCCATTTAAAACATTTTCCACCTTTGTCTTTTTACTACCTT-TTCCTCTAGGAGTCATAGGAAAACAATTTTGTGATTGGGTTGAGATGATGTCATATCCTC--- i proCoq1.NW_012149263v1 I 349 I 3 s otoGar3.GL873654 5529074 337 + 5549422 CTTCCTCTCCTCTGGCCTTGGCTCTCAATGCCTGCCTTTCCATTCTGATGTTTTAATGATAC-CCTCCCTGTTCTGGGATTTGTGTAAAGGAAGCAAGGCAGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACCGCAGTTGCACAGGAAATGAGGCGGCTCCTGGCTAGCTGCTGCCAAACACTGATTTTAGGTGGCAG------AGGCCTTAGGGTCTGAGCAATTTAAAGCATTTTCTACCTTTGTCTTTTTACTACCTT-TTCCTCCAAGAGTCTTAGGAAAACAATTTTGTGATTGGGTTGAAATGACATCATGTCCTC--- i otoGar3.GL873654 C 0 I 3 s mm10.chr7 111139200 319 - 145441459 TTTCCTTTCCTCTGGCCTTGGCTCTCCCTGCCTGCCTTTCCG---------TTTAATGATACTCCTCTTTGCTCAGTGATTTGTGTTCAGGAAGCTGGGCTGAGATTACTTTTGTTTCTGCTTTGTGAACTTCTTCCCCCACTTCCTATTTTTTACTGGCCTTGTGCAGGAAATGAG----CTCCTGACTGGCTCCTGTTGAGCACTGATTTGAGGTGGCAGATGATGAGGCCTTAGGTTCTGAGGCATGCC--GCACTTTCCACCTTTG---------TGCCTTCTTCCTCTGGGAGACACAGGAAC---ATTTTGTGATAGGGTTGAGATGATGTCATGACCTC--- i mm10.chr7 C 0 I 4 s canFam3.chr1 4654649 336 - 122678785 CTTCCTTTCCTCTGGCTTTGGCTTTCCATGTCTGCCTTTCCATTTTGATGTTTTAATGATAC-CCTCCCTGCTCAGTGATTTGTGTTCAGGAAGCTAGGCAGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTA-TTTTTACCGAGCAACTACAGGAAATGAGGCAGCTCCTGGCTGGCTGCTGCTAAGCACTGATTTTAGGTGGCAGAGAACAAGGC--------CTGAGCCATTTAAAACATTTTCCACCTTAGTCTTTTCACTATGTCCTTCCTGTAGGAATCATTGGAACATGATTTTGTGATTGGATTGAGATGATGACATGTCCTC--- i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 391555 343 + 643850 CTTCCTTTCCTCAGGCCTTGGCTCTACATGCGTGCCTTTCCATGTTGATGTTTTAAAGATAT-----CCTGCTCAGTGATTTGTGTTCAGGAAACTAGGCTGTGATTACTTTTGTTTCTGCTTTGTGAACTTCCTCCCCCACTTCCTT-TTTTTATGGAGCCACTACAGGAAATGAGGCGGTTCCTGGCTGGCTGCTGTTAGGCACTGATTTTGGGTGGCAGAGAGCAAGGTGTTAGGGCCTGAGCCATTTAAAGCATTTTCCCTTTTTGTCTTTTCACTACATTTTTCTTCTGTGAATCAGAGGAACATGATTTTCTGATTGGGTTGAGATGATGTCATACCTTTCTC i dasNov3.JH563638 C 0 C 0 e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=167758.000000 s hg38.chr19_GL383574v1_alt 125244 18 + 155864 AGCCTT-GTGGGTGGA-GAC s panTro5.chr19 36192864 18 + 61309027 AGCCTT-GTGGGTGGA-GAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937092 18 + 64411610 AGCCTT-GTGGGTGGA-GAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348801 18 - 8369475 AGCCTT-GTGGGTGGA-GAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946018 18 - 106955855 AGCCTT-GTGGGTGGA-GAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261666 18 + 53671032 AGCCTT-GTGGGTGGA-GAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715574 18 + 59248254 AGCCTT-GTGGGTGGA-GAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587933 18 - 13342542 AGCCTT-GTGGGTGGA-GAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5511845 18 + 7714307 AGCCTT-GTGGGTGGA-GAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315816 18 + 50890351 AGCCTT-GTGGGTGGA-GAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947794 18 - 2385121 AGCCTT-GTGGGTGGA-GAT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28601971 18 + 49145316 AGCCTT-GTGGGTAGA-GAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451880 18 + 8899380 AGCCTT-GTTGGTAGA-GAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1658515 18 - 2680843 AGCCTT-GTTGGTAGA-GAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405248 18 - 4471408 AGCCTT-GTGGGTAGA-GAT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 612073 17 + 2501019 AGCCTT-GGGGGTGG--GGT i proCoq1.NW_012149263v1 I 3 C 0 s otoGar3.GL873654 5529414 19 + 5549422 AGCCTT-GGTGGGGGATGGT i otoGar3.GL873654 I 3 C 0 s mm10.chr7 111139523 17 - 145441459 GACCTG-GGGGTTGGG-GA- i mm10.chr7 I 4 C 0 s canFam3.chr1 4654988 15 - 122678785 ACCCTTCATGGGGTG----- i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 391898 13 + 643850 AGCCTT-G-GGGTGG----- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3995593 20 - 30143674 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=616254.000000 s hg38.chr19_GL383574v1_alt 125262 51 + 155864 AGGGGTTGCTGTTTAGTTGGAGGACAGCACT-TTTGTGA--AGGAAGTGAGGGC s panTro5.chr19 36192882 51 + 61309027 AGGGGTTTCTGTTTAGTTGGAGGACAGCACT-TTTGTGA--AGGAAGTGAGGGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937110 51 + 64411610 AGGGGTTGCTGTTTAGTTGGAGGACAGCACT-TTTGTGA--AGGAAGTGAGGGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348819 51 - 8369475 AGGGGTTGCTGTTTAGTTGGAGGACAGCACT-TTTGTGA--AGGAAGTGTGGGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946036 51 - 106955855 AGGGGTTGCTGTTTAGTTGGAGGACAGCACT-TTTGTGA--AGGAGGTGGGGGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261684 53 + 53671032 AGGGGTTGCTGTTTAGTTTGAGGACAGCACT-TTTGTGAAGAGGAGGTAAGGGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715592 53 + 59248254 AGGGGTTGCTGTTTAGTTTGAGGACAGCACT-TTTGTGAAGAGGAGGTAAGGGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4587951 53 - 13342542 AGGGGTTGCTGTTTAGTTTGAGGACAGCACT-TTTGTGAAGAGGAGGTAAGGGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5511863 51 + 7714307 AGGGGTTGCTGTTTAGTTTGAGGACAGCACT-TTTGTGA--AGGAGGTAAGGGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315834 51 + 50890351 AGGGGTTGCTGTTTAGTTTGAGGACAGCACT-TTTGTGA--AGGAGGTAAGGGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947812 51 - 2385121 AGGGGTTGCTGTTTAGTTTGAGGACAGCACT-TTTGTGA--AGGAGGTAAGGGC i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28601989 48 + 49145316 AGGGGTTGCCGTTTAGTT---GGTCAGCACT-TCTGTGA--AAGAGGTGAGGGC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451898 51 + 8899380 AGGGGTTGCTGTTTGGTTGGAGGACAGCACT-TCTGTGA--AAGAGGTGAGGGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1658533 51 - 2680843 AGGGGTTGCTGTTTGGTTGGAGGACAGCACT-TCTGTGA--AAGAGGTGAGGGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405266 51 - 4471408 AGGGATTGCTGTTTGGTTGGAGGACAGCACT-TCTGTGA--AAGAGATGAGGGC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3995613 51 - 30143674 AGGGGTTGCAGCTCAGCTGGAGGGCAGCATT-TTTGTGA--AGTAGGTGAGGGC i micMur3.chr22 I 20 I 98 s proCoq1.NW_012149263v1 612090 51 + 2501019 GGGGGTTGCAGCTCAGCCAGAGGGCAGCATT-TTTATGA--AGTAGGTGAGGGC i proCoq1.NW_012149263v1 C 0 I 1 s otoGar3.GL873654 5529433 45 + 5549422 AGGGGCTGCAGCTCAGCCGAAGGGCAGCATT-TTTATGT--A------GAGGGC i otoGar3.GL873654 C 0 I 1 s mm10.chr7 111139540 30 - 145441459 --AGACTGCTACT-----------CAAAACT----------CTGAGGTGAGGC- i mm10.chr7 C 0 C 0 s canFam3.chr1 4655003 46 - 122678785 --GGGT----GCTCAGTTGGAGGGCAGCGTTTTTTGTGA--AGTAGGTGAGAAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 391911 51 + 643850 TGGGGTTGCTGCTCAACAAGATGGCTGCACT-TTTGTGA--AGGTGGTGAGGAG i dasNov3.JH563638 C 0 C 0 e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=536282.000000 s hg38.chr19_GL383574v1_alt 125313 47 + 155864 TTTTTTCAGCA-GTAACAATGTGGGTGGAATGTCGTGGCCCTGTGGCC s panTro5.chr19 36192933 47 + 61309027 TTTTTTCAGCA-GTAACAATGTGGGTGGAATGTCGTGGCCCTGTGGCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937161 47 + 64411610 TTTTTTCAGCA-GTAACAATGTGGGTGGAATGTCGTGGCCCTGTGGCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348870 47 - 8369475 TTTTTTCAGCA-GTAACAATGTGGGTGGAATGTTGTGGCCCTGTGGCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946087 47 - 106955855 TTTTTTCAGCA-GTAACAATGTGGGTGGGATGTCATGGCCCTGTGGCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261737 46 + 53671032 -TTTTTCAGCA-GTAACAGTGTGGGTGGGATGTTGTGGCCCTGTGGCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715645 46 + 59248254 -TTTTTCAGCA-GTAACAGTGTGGGTGGGATGTTGTGGCCCTGTGGCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588004 46 - 13342542 -TTTTTCAGCA-GTAACAGTGTGGGTGGGATGTTGTGGCCCTGTGGCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5511914 46 + 7714307 -TTTTTCAGCA-GTAACAGTGTGGGTGGGATGTTGTGGCCCTGTGGCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315885 46 + 50890351 -TTTTTCAGCA-GTAACAGTGTGGGTGGGATGTTGTGGCCCTGTGGCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947863 46 - 2385121 -TTTTTCAGCA-GTAACAGTGTGGGTGGGATGTTGTGGCCCTGTGGCC i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28602037 47 + 49145316 TTTTTTCAGCA-GTAAAAATGTGGGTGGGATGTCATGGCCCTGTGGCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451949 47 + 8899380 TTTTCTCAGCA-GTAACAATGTGGATGGGATGTCATGGCCCCGTGGCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1658584 47 - 2680843 TTTTTTCAGCA-GTAACAATGTGGGTGGGATGTCATGGCCCTGTGGCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405317 47 - 4471408 TTTTTTCAGCA-GTAACAGTGTGGGTGGGATGTCATGGCCCTGTGGCT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 612142 47 + 2501019 TTTTTTGAGCT-GTAACTGTAGGGGTGGCATGTCCTGGCCCTGTGGCC i proCoq1.NW_012149263v1 I 1 I 59 s otoGar3.GL873654 5529479 45 + 5549422 TTATTTGAGCTCTTAACAGTAGGGGTG--CTGTCATAGGAGAGTGGT- i otoGar3.GL873654 I 1 C 0 s mm10.chr7 111139570 36 - 145441459 TTTATTCAGCC-TGAACAGCATGGCTGGG-TATCCTGG---------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4655049 47 - 122678785 TTTTTTCCATT-GTAATAGTAGGAGTGGGACATTGTAGCCTGGAGGCC i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 391962 46 + 643850 -TTTTCTGGTG-ATAACAATAGAGGTGAAACATGGTGGCCCAGTGGCT i dasNov3.JH563638 C 0 I 16 e micMur3.chr22 3995664 98 - 30143674 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=360413.000000 s hg38.chr19_GL383574v1_alt 125360 37 + 155864 TCTGC--------------AGCTTG-----AGGGAAGGTTAAGTTGAAGGGACAGG s panTro5.chr19 36192980 37 + 61309027 TCTGC--------------AGCTTG-----AGGGAAGGTTAAGTTGAAGGGACAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937208 37 + 64411610 TCTGC--------------AGCTTG-----AGGGAAGGTTAAGTTGAAGGGACAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348917 37 - 8369475 TCTGC--------------AGCTTG-----AGGGAAGGTTAAGTTGAAGGGACAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946134 37 - 106955855 TCTGC--------------AGCTTG-----AGGGAAGGTTAAGTTGAAGGGACAGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261783 37 + 53671032 TCTGC--------------AGCTTG-----AGGGAAGGTTAAGTTGAAGGGAGAGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715691 37 + 59248254 TCTGC--------------AGCTTG-----AGGGAAGGTTAAGTTGAAGGGAGAGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588050 37 - 13342542 TCTGC--------------AGCTTG-----AGGGAAGGTTAAGTTGAAGGGAGAGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5511960 37 + 7714307 TCTGC--------------AGCTTG-----AGGGAAGGTTAAGTTGAAGGGAGAGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315931 37 + 50890351 TCTGC--------------AGCTTG-----AGGGAAGGTTAAGTTGAAGGGAGCGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947909 37 - 2385121 TCTGC--------------AGCTTG-----AGGGAAGGTTAAGTTGAAGGGAGAGG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28602084 37 + 49145316 TCTGC--------------TGCTTG-----AGGAAAGGTTAAGTAGAAGGGACAGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5451996 37 + 8899380 TCTGC--------------TGCTTG-----AGAAAAGGTTAAGTAGAAGGGACAGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1658631 37 - 2680843 TCTGC--------------TGCTTG-----AGGAAAGGTTAAGTAGGAGGGACAGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405364 37 - 4471408 TCTGC--------------TGCTTG-----AGGAAAGGTTAAGTAGAAGGGACAGG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5529524 33 + 5549422 ----C--------------AGCAGG-----AGCAAAGGTTAGGTTGAAGAGACAGG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111139606 31 - 145441459 TATGC-------------------------AAACAAGGGTCAGTTGAAGGGATGGG i mm10.chr7 C 0 I 957 s canFam3.chr1 4655098 52 - 122678785 GCTGCTGTCATGGGTGAATGGCTTGGTAGAAGCAAAGGGTGGTTTGAAGGGA---- i canFam3.chr1 I 2 C 0 s dasNov3.JH563638 392024 37 + 643850 TGAAC--------------AGCTTGGTATGAGCAAAGAGTGGAT-GAGGAGA---- i dasNov3.JH563638 I 16 C 0 e proCoq1.NW_012149263v1 612189 59 + 2501019 I e micMur3.chr22 3995664 98 - 30143674 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=8790.000000 s hg38.chr19_GL383574v1_alt 125397 1 + 155864 C s panTro5.chr19 36193017 1 + 61309027 C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937245 1 + 64411610 C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348954 1 - 8369475 C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946171 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261820 1 + 53671032 C i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715728 1 + 59248254 C i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588087 1 - 13342542 C i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5511997 1 + 7714307 C i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315968 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947946 1 - 2385121 C i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28602121 1 + 49145316 C i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5452033 1 + 8899380 C i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1658668 1 - 2680843 C i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405401 1 - 4471408 C i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5529557 1 + 5549422 A i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 612189 59 + 2501019 I e micMur3.chr22 3995664 98 - 30143674 I e dasNov3.JH563638 392061 0 + 643850 C e mm10.chr7 111139637 957 - 145441459 I e canFam3.chr1 4655150 0 - 122678785 C e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=701459.000000 s hg38.chr19_GL383574v1_alt 125398 49 + 155864 CCTGTTGCAGG-TAAGGATAGGGAGGTGGATTCTGGTTACTCTCTAGAGG s panTro5.chr19 36193018 49 + 61309027 CCTGTTGCAGG-TAAGGATAGGAAGGTGGATTCTGGTTACTCTCTAGAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937246 49 + 64411610 CCTGTTGCAGG-TAAGGATAGGAAGGTGGATTCTGGTTACTCTCTAGAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6348955 49 - 8369475 CCTGTTGCAGG-TAAGGATAGGAAGGTGGATTCTGGTTACTCTCTAGAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946172 49 - 106955855 CCTGTTGCAGG-TAAGGATAGGAAGGTGGATTGTGGTTACTCTCTAGAGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261821 49 + 53671032 CTTGTTGCAGG-TAAGGATGGGAAGGTGGATTCTGGTTACTCTCTAGGGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715729 49 + 59248254 CTTGTTGCAGG-TAAGGATGGGAAGGTGGATTCTGGTTACTCTCTAGGGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588088 49 - 13342542 CTTGTTGCAGG-TAAGGATGGGAAGGTGGATTCTGGTTACTCTCTAGGGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5511998 49 + 7714307 CTTGTTGCAGG-TAAGGATGGGAAGGTGGATTCTGGTTACTCTCTAGGGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29315969 49 + 50890351 CTTGTTGCAGG-TAAGGATGGGAAGGTGGATTCTGGTTACTCTCTAGGGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947947 49 - 2385121 CTTGTTGCAGG-TAAGGATGGGAAGGTGGATTCTGGTTACTCTCTAGGGG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28602122 50 + 49145316 TCTGTTGCAGGTTAAGAATGGGAAGGTGGATTCTGGATACTCTCTAGGGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5452034 49 + 8899380 CCTGTTGCAGG-TAAGAATGGAAAGGTGGATTCCGGATACTCTCTAGGGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1658669 49 - 2680843 CCTGTTGCAGG-TAAGAATGGGAAGGTGGATTCTGGATTCTCTCTAGGGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405402 49 - 4471408 CCTGTTGCAGG-TAAGAATGGGAAGGTGGATTCTGGATACTCTCTAGGGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3995762 49 - 30143674 CCTGTTGCAGG-TAAGGCTGGGGAGGTGGATTCTGGCTACTTTCTAGAGG i micMur3.chr22 I 98 C 0 s proCoq1.NW_012149263v1 612248 49 + 2501019 CCTGTTGCAGG-TAAGGCTGGGAAGGTGGATTCTGGCTGCTTTCTAGAGG i proCoq1.NW_012149263v1 I 59 I 6 s otoGar3.GL873654 5529558 47 + 5549422 CCTGTTGCGGG-TAAGGCTGAGAAGGTAAATTCTAGGTACTTTCTAGA-- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4655150 48 - 122678785 CCTGTTCTAAG-TAAGGCTGGAAAGGTGGACTCTGGTC-CTCCCTAGGTG i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 392061 49 + 643850 CCTGTCACAGG-TAAGTCTGGAAAGGTAGATTCTGGTTACCTTCTAGAGA i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111139637 957 - 145441459 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=227913.000000 s hg38.chr19_GL383574v1_alt 125447 25 + 155864 GCCTTGACTGGCAG-CTTGAAGTGAG s panTro5.chr19 36193067 25 + 61309027 GCCTTGACTGGCAG-CTTGAAGTGAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937295 25 + 64411610 GCCTTGACTGGCAG-CTTGAAGTGAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349004 25 - 8369475 GCCTTGACTGGCAG-CTTGAAGTGAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946221 25 - 106955855 GCCTTGACAGGCAG-CTTGAAGTGAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261870 25 + 53671032 GCCTTGACTGGCAG-CTTGAAGTGAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715778 25 + 59248254 GCCTTGACTGGCAG-CTTGAAGTGAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588137 25 - 13342542 GCCTTGACTGGCAG-CTTGAAGTGAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512047 25 + 7714307 GCCTTGACTGGCAG-CTTGAAGTGAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316018 24 + 50890351 GCCTTGACTGGCAG-CTTGAA-TGAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 947996 25 - 2385121 GCCTTGACTGGCAG-CTTGAAGTGAG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28602172 25 + 49145316 GCCTTGACTGACAG-CTTGAAGTAGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5452083 16 + 8899380 GCCTTGACTGACAA-CT--------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1658718 25 - 2680843 GCGTTGACTGACAA-CTTGAAGTGGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405451 25 - 4471408 GCCTTGACTGACAG-CTTGAAGTGGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3995811 24 - 30143674 GCCTTGAC-TGAAG-CTTGCAGTGGT i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5529605 24 + 5549422 GTCTTGCT-GACAG-CTTGGAGTGGT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4655201 26 - 122678785 GCCTTGGCTGGCAGTCTTGGAGTGGA i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 392110 8 + 643850 ACCTTAAT------------------ i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 612297 6 + 2501019 I e mm10.chr7 111139637 957 - 145441459 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=215963.000000 s hg38.chr19_GL383574v1_alt 125472 17 + 155864 CTGAGGAGCCTAGTCTG s panTro5.chr19 36193092 17 + 61309027 CTGAGGAGCCCAGTCTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937320 17 + 64411610 CTGAGGAGCCCAGTCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349029 17 - 8369475 CTGAGGAGCCCAGTCTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946246 17 - 106955855 CTGAGGAGCCCAGTCGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261895 17 + 53671032 CTGAGGAGcccagtctt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715803 17 + 59248254 CTGAGGAGCCCAGTCTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588162 17 - 13342542 CTGAGGAGCCCAGTCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512072 17 + 7714307 CTGAGGAGCCCAGTCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316042 17 + 50890351 CTGAGGAGCCCAGTCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948021 17 - 2385121 CTGAGGAGCCCAGTCTG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28602197 17 + 49145316 CTGGGGAGCCCAGTCTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5452099 13 + 8899380 ----GGAGTGTAGTCTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1658743 17 - 2680843 CTGAAGAGCCCAGTCTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405476 17 - 4471408 CTGGGGAGCCCAGTCTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3995835 17 - 30143674 CTCGGGAGCCCAGTCTG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 612303 17 + 2501019 CTGGGGAGCCCAGTCTG i proCoq1.NW_012149263v1 I 6 C 0 s otoGar3.GL873654 5529629 17 + 5549422 CTGGGGAGCCCAGTCGA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4655227 16 - 122678785 CTGAAG-GACCAGTCTG i canFam3.chr1 C 0 I 228 e dasNov3.JH563638 392118 0 + 643850 C e mm10.chr7 111139637 957 - 145441459 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=402516.000000 s hg38.chr19_GL383574v1_alt 125489 31 + 155864 CTCTCTCAGATCTTTGAGGGGGGCCTCAGCC s panTro5.chr19 36193109 31 + 61309027 CTCTCTCAGATCTTTGAGGGGGGCCTCAGCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937337 31 + 64411610 CTCTCTCAGATCTTTGAGGGGGGCCTCAGCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349046 31 - 8369475 CTCTCTCAGATCTTTGAGGGGGGCCTCAGCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946263 31 - 106955855 CTCTCTCAGATCTTTGAGGAGGGCCTCAGCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261912 31 + 53671032 ctctctgatatctttgaggagggcctcagcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715820 31 + 59248254 CTCTCTGATATCTTTGAGGAGGGCCTCAGCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588179 31 - 13342542 CTCTCTGATATCTTTGAGGAGGGCCTCAGCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512089 31 + 7714307 CTCTCTGTTATCTTTGAGGAGGGCCTCAGCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316059 31 + 50890351 CTCTCTGATATCTTTGAGGAGGGCCTCAGCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948038 31 - 2385121 CTCTCTGATATCTTTGAGGAGGGCCTCAGCC i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28602214 31 + 49145316 CTGTCCGAGATCTTTGAGGAGGGCCTCATCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5452112 31 + 8899380 CTGTCCGAGATCTTTGAGGAGGGCCTCAGCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1658760 31 - 2680843 CTGTCCGAGATCTTTGAGGAGGGCCTCAGCC i cebCap1.NW_016107633v1 C 0 I 366 s aotNan1.NW_018505377v1 405493 31 - 4471408 CTGTCCGAGATCTTTGAGGAGGGCCTCAGCC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3995852 31 - 30143674 CTCTCTCAAATCCTTAACCAGGGCCTCAGCC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 612320 30 + 2501019 CTCTCTCAGATCTTTAACCA-GGCCTCAGCC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5529646 29 + 5549422 --CTCTGAAATCTTTAACCAGGGCCTCAGCT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4655471 31 - 122678785 CTCTCTGAGATCTTTGAAGAGGGCATCAGCC i canFam3.chr1 I 228 C 0 s dasNov3.JH563638 392118 23 + 643850 --------GAGCTTTGATGTGGACCTCAGCC i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111139637 957 - 145441459 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=504084.000000 s hg38.chr19_GL383574v1_alt 125520 42 + 155864 TCTATGGCAC-CCTCCTTCCTCTGAACCCA----TGGCATTTGTTTT s panTro5.chr19 36193140 42 + 61309027 TCTATGGCAc-cctccttcctctgaaccca----tggcatttgtttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937368 42 + 64411610 TCTATGGCAc-cctccttcctctgaaccca----tggcatttgtttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349077 42 - 8369475 TCTATGGCAc-cctccttcctctgaacccc----tggcatttgtttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946294 42 - 106955855 TCTATGGCAC-CCTCCTTCCTCTGAACCCA----TGGCATTTGTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261943 42 + 53671032 tcaatggcac-tctccttcatctgaactca----tggcatttatttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715851 42 + 59248254 TCAATGGCAC-TCTCCTTCATCTGAACTCA----TGGCATTTATTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588210 42 - 13342542 TCTATGGCAc-tctccttcatctgaactca----tggcatttatttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512120 42 + 7714307 TCTATGGCAC-TCTCCTTCTTCTGAACTCA----TGGCATTTGTTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316090 42 + 50890351 TCTATGGCAC-TCTCCTTCTTCTGAACTCA----TGGCATTTGTTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948069 42 - 2385121 TCTATGGCAC-TCTCCTTCTTCTGAACTCA----TGGCATTTGTTTT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28602245 42 + 49145316 TCTGCGGCACTCTTCCTTTCCCTGAACTCG----T-GCATTTGTTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5452143 42 + 8899380 TCTGTGGCAC-CCTCCTTCCTCTGAACTCA----TGGCATTTGTTTT i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 405524 42 - 4471408 TCTGTGGCAC-CCTCCTTCCTCTGAACTCA----CGGCGTTTGTTTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3995883 42 - 30143674 TCTGTGGCAC-TCCCTCTCCTCTGAACTTA----TGGCATTTGCTTT i micMur3.chr22 C 0 I 429 s proCoq1.NW_012149263v1 612350 46 + 2501019 TCTATGGCAC-TCGCTTTCCTCTGAACTCATGCCTGGCATTTGTTGT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5529675 42 + 5549422 TCTGTGGCAC-TCACTTTCCTCTGAATGTG----TGGCATTTGTTTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4655502 42 - 122678785 TTTGTGGTGC-TCTCCTTCCTCTGAAGTCA----TGGCATTTGTCTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 392141 39 + 643850 --TCTGGCTC-TCTCCTTC-TCTGAACTCA----AGGCATTTGTTCT i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111139637 957 - 145441459 I e cebCap1.NW_016107633v1 1658791 366 - 2680843 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=86253.000000 s hg38.chr19_GL383574v1_alt 125562 13 + 155864 CTAAACGACTTAT s panTro5.chr19 36193182 13 + 61309027 ctaaatgacttat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937410 13 + 64411610 ctaaatgacttat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349119 13 - 8369475 ctaaacgacttat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946336 13 - 106955855 CTAAACGACTTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261985 13 + 53671032 ctaaacgacttat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715893 13 + 59248254 CTAAACGACTTAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588252 13 - 13342542 ctaaacgacttat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512162 13 + 7714307 CTAAACGACTTAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316132 13 + 50890351 CTAAACGCCTTAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948111 13 - 2385121 CTAAACGACTTAT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28602287 13 + 49145316 CGAAGCGACTTAT i calJac3.chr22 C 0 I 1679 s saiBol1.JH378197 5452185 9 + 8899380 CTAAACGAC---- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 405566 9 - 4471408 CTAAACGAC---- i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 612396 12 + 2501019 -TAGACATCTTAT i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4655544 12 - 122678785 CTAAATCAC-TAT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 392180 8 + 643850 CTAAACCA----- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3995925 429 - 30143674 I e otoGar3.GL873654 5529717 0 + 5549422 C e mm10.chr7 111139637 957 - 145441459 I e cebCap1.NW_016107633v1 1658791 366 - 2680843 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=81165.000000 s hg38.chr19_GL383574v1_alt 125575 10 + 155864 TTAGCATTTA s panTro5.chr19 36193195 10 + 61309027 ttagcattta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937423 10 + 64411610 ttagcattta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349132 10 - 8369475 ttagcattta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946349 10 - 106955855 TTAGCATTTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30261998 10 + 53671032 ttagcattta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715906 10 + 59248254 TTAGCATTTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588265 10 - 13342542 ttagcattta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512175 10 + 7714307 TTAGCATTTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316145 10 + 50890351 TTAGCATTTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948124 10 - 2385121 TTAGCATTTA i manLeu1.NW_012102454v1 C 0 C 0 s saiBol1.JH378197 5452194 3 + 8899380 -------TTA i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 405575 3 - 4471408 -------TTA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 612408 10 + 2501019 TTAGCATTTA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5529717 10 + 5549422 CTAAAGTTCA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4655556 10 - 122678785 TTAGCATTTA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 392188 10 + 643850 TTACCATCTC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3995925 429 - 30143674 I e mm10.chr7 111139637 957 - 145441459 I e cebCap1.NW_016107633v1 1658791 366 - 2680843 I e calJac3.chr22 28602300 1679 + 49145316 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=192768.000000 s hg38.chr19_GL383574v1_alt 125585 19 + 155864 --TCAGTCTCTTTTTTGATGA s panTro5.chr19 36193205 19 + 61309027 --tcagtctcttttttgatga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937433 19 + 64411610 --tcagtctcttttttgatga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349142 19 - 8369475 --tcagtctcttttttgatga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946359 19 - 106955855 --TCAGTCTCTTTTTTGATGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262008 19 + 53671032 --tcagtctcttttttgatga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715916 19 + 59248254 --TCAGTCTCTTTTTTGATGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588275 19 - 13342542 --tcagtctcttttttgatga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512185 19 + 7714307 --TCAGTCTCTTTTTTGATGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316155 19 + 50890351 --TCAGTCTCTTTTTTGATGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948134 19 - 2385121 --TCAGTCTCTTTTTTGATGA i manLeu1.NW_012102454v1 C 0 C 0 s saiBol1.JH378197 5452197 19 + 8899380 --TCAGTCTCTTTTTTGATGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1659157 19 - 2680843 --TCAGTCTCTTTTTTGATGA i cebCap1.NW_016107633v1 I 366 C 0 s aotNan1.NW_018505377v1 405578 19 - 4471408 --TCAGTCTCTTTTTTGATGA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 612418 19 + 2501019 --CCTGTCTCTTTTCCAGTGA i proCoq1.NW_012149263v1 C 0 I 14 s otoGar3.GL873654 5529727 18 + 5549422 --TCTATCTTTTTTACAGTG- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4655566 19 - 122678785 --CTCACTTCTTTTCCCATGG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 392198 21 + 643850 TTACCATCTCCTTTCCAGTGG i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3995925 429 - 30143674 I e mm10.chr7 111139637 957 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=119785.000000 s hg38.chr19_GL383574v1_alt 125604 17 + 155864 TGCCTCTTCTTAGCTTA s panTro5.chr19 36193224 17 + 61309027 tgcctcttctTAGCTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937452 17 + 64411610 tgcctcttctTAGCTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349161 17 - 8369475 tgcctcttctTAGCTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946378 17 - 106955855 TGGCTTTTCTTAGCTTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262027 17 + 53671032 tgcctctttttatctta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715935 17 + 59248254 TGCCTCTTTTTATCTTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588294 17 - 13342542 tgcctcttttTATCTTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512204 17 + 7714307 TGCCTCTTTTTATCTTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316174 17 + 50890351 TGCCTCTTTTTATCTTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948153 17 - 2385121 TGCCTCTTTTTATCTTA i manLeu1.NW_012102454v1 C 0 C 0 s saiBol1.JH378197 5452216 17 + 8899380 TGGCTCTTTATAGCTTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1659176 17 - 2680843 TGGCTCTTTCTAGCTTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405597 17 - 4471408 TGGCTCTTTCTAGCTTA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5529745 14 + 5549422 ---CCCTCTTAACTGTA i otoGar3.GL873654 C 0 I 2 s canFam3.chr1 4655585 17 - 122678785 TAACTCTTGTTGTGTTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 392219 16 + 643850 TATCTCTTAATGTCTG- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 612437 14 + 2501019 I e micMur3.chr22 3995925 429 - 30143674 I e mm10.chr7 111139637 957 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=457843.000000 s hg38.chr19_GL383574v1_alt 125621 40 + 155864 TGGACCCGTTATAGCTTAATTTATGGAGAAA-GTTTGTATC s panTro5.chr19 36193241 40 + 61309027 TGGACCAGTTATAGCTTAATTTATGGAGAAA-GTTTGTATC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937469 40 + 64411610 TGGACCAGTTGTAGCTTAATTTATGGAGAAA-GTTTGTATC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349178 40 - 8369475 TGGACCAGTTATAGCTTAATTTATGGAGAAA-GTTTGTATC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946395 40 - 106955855 TGGACCAGTTATAGCTTAATTTATGGAGAAA-GTTTGTGTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262044 40 + 53671032 tggaccggttatAGCTTAATTTATGGAGAAA-GTTTGTATC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715952 40 + 59248254 TGGACCGGTTATAGCTTAATTTATGGAGAAA-GTTTGTATC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588311 40 - 13342542 TGGACCGGTTATAGCTTAATTTATGGAGAAA-GTTTGTATC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512221 40 + 7714307 TGGACCGGTTATAGCTTAATTTATGGAGAAA-GTTTGTATC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316191 40 + 50890351 TGGACCGGTTATAGCTTAATTTATGGAGAAA-GTTTGTATC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948170 40 - 2385121 TGGACCGGTTATAGCTTAATTTATGGAGAAA-GTTTGTATC i manLeu1.NW_012102454v1 C 0 C 0 s saiBol1.JH378197 5452233 40 + 8899380 TGGACCTCTTATAGCTTAATTTATGGAGAAA-GTTTGTGTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1659193 40 - 2680843 TGGACCTCTTATAGCTTAATTTATGGAGAAA-GTTTGTATC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405614 40 - 4471408 TGGACCTCTTATAGCTTAATTAATGGAGAAA-GTTTGTATC i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 612451 40 + 2501019 TGGACCTGTTATAGCTTAATTTATAGGGGAA-GTTTGTATT i proCoq1.NW_012149263v1 I 14 C 0 s otoGar3.GL873654 5529761 40 + 5549422 TGGATTTCTTGTAGCTTAATGTATGGGGGAG-CTTTGTATT i otoGar3.GL873654 I 2 C 0 s canFam3.chr1 4655602 40 - 122678785 TGGACTTTTGGTAGCTTCGTTTATGGGAGAA-GTTTGTATT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 392235 41 + 643850 TGGACCTGTTATGACTTAATTTGTGGGGCAATGTCTATATC i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3995925 429 - 30143674 I e mm10.chr7 111139637 957 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=156429.000000 s hg38.chr19_GL383574v1_alt 125661 11 + 155864 ATCTCCCCAGA s panTro5.chr19 36193281 11 + 61309027 ATCTCCCCAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937509 11 + 64411610 ATCTCCCCAGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349218 11 - 8369475 ATCTCCCCAGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946435 11 - 106955855 ATCTCCCCAGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262084 11 + 53671032 ATCTCCCCAGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34715992 11 + 59248254 ATCTCCCCAGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588351 11 - 13342542 ATCTCCCCAGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512261 11 + 7714307 GTCTCCCCAGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316231 11 + 50890351 ATGTCCCCAGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948210 11 - 2385121 GTCTCCCCAGA i manLeu1.NW_012102454v1 C 0 C 0 s saiBol1.JH378197 5452273 11 + 8899380 ATCTCCCCAGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1659233 11 - 2680843 ATCTCCCTAGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405654 11 - 4471408 ATCTCCCCAGA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3996354 11 - 30143674 ATCTCCCCAGA i micMur3.chr22 I 429 C 0 s proCoq1.NW_012149263v1 612491 11 + 2501019 ACCTCCCCAGA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5529801 11 + 5549422 ATTTCCCCAGA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4655642 11 - 122678785 ATCTTCTCAGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 392276 11 + 643850 ATCTTCCCAGG i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111139637 957 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=529533.000000 s hg38.chr19_GL383574v1_alt 125672 39 + 155864 AAGAAGTAACTT-GTTATACATTAGTTAACTTGAATATGG s panTro5.chr19 36193292 39 + 61309027 AAGAAGTAACTT-GTTATACATTAGTTAACTTGAATATGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937520 39 + 64411610 AAGAAGTAACTT-GTTATACATTAGTTAACTTGAATATGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349229 39 - 8369475 AAGAAGTAACTT-GTTATACATTAGTTAACTTGAATATGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946446 39 - 106955855 AAGAAGTAACTT-GTTATACATTAGTTAACTTGAATATGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262095 39 + 53671032 AAGAAGTAACTT-GTTATACATTAGTTAACTTGAATATGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34716003 39 + 59248254 AAGAAGTAACTT-GTTATACATTAGTTAACTTGAATATGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588362 39 - 13342542 AAGAAGTAACTT-GTTATACATTAGTTAACTTGAATATGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512272 39 + 7714307 AAGAAGTAACTT-GTTATACATTAGTTAACTTGAATATGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316242 39 + 50890351 AAGAAGTAACTT-GTTATACATTAGTTAACTTGAATATGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948221 39 - 2385121 AAGAAGTAACTT-GTTATACATTAGTTAACGTGAATATGG i manLeu1.NW_012102454v1 C 0 C 0 s saiBol1.JH378197 5452284 39 + 8899380 AAGAAGTAACTT-GTCATATATTAGTTAACTTGAATATGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1659244 39 - 2680843 AAGAAGTAACTT-GTCATATATTAGTTAACTTGAATATGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405665 39 - 4471408 AAGAAATAACTT-GTCATGTATTAGTTAACTTGAATATGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3996365 39 - 30143674 GAGAGGTAGCTT-TTTATACACTAGATAACTTGAATGTgg i micMur3.chr22 C 0 I 190 s proCoq1.NW_012149263v1 612502 39 + 2501019 AAGAGGTAGCTT-TTTATGCATTAGGTAACTTGAATGTgg i proCoq1.NW_012149263v1 C 0 I 194 s otoGar3.GL873654 5529812 38 + 5549422 AAGA-ATAACTT-TTTACACATAAGGTAACTTGAATATGG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111140594 35 - 145441459 AAGAAATAATTTCATAATATATTAGGTAACTTGAA----- i mm10.chr7 I 957 C 0 s canFam3.chr1 4655653 39 - 122678785 AAGAAGTAACTC-TTTATACAGTAGGTTACTTGGATATGG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 392287 37 + 643850 AAGAAGTAACTT-TTTACACAT--AGTAACTTGAATATGG i dasNov3.JH563638 C 0 C 0 e calJac3.chr22 28602300 1679 + 49145316 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=196819.000000 s hg38.chr19_GL383574v1_alt 125711 22 + 155864 AAGGTGCTCAAAGCATTAGTTT s panTro5.chr19 36193331 22 + 61309027 AAGGTACTCAAAGCATTAGTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937559 22 + 64411610 AAGGTACTCAAAGCATTAGTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349268 22 - 8369475 AAGGTGCTCAAAGCATTAGTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946485 22 - 106955855 AAGGTGCTCAAAGCATTAGATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262134 22 + 53671032 AAGGTGCTCAAAGCATTAGTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34716042 22 + 59248254 AAGGTGCTCAAAGCATTAGTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588401 22 - 13342542 AAGGTGCTCAAAGCATTAGTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512311 22 + 7714307 AAGGTGCTCAAAGCATTAGTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316281 22 + 50890351 AAGGTGCTCAAAGCTTTAGTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948260 22 - 2385121 AAGGTACTCAAAGCATTAGTTT i manLeu1.NW_012102454v1 C 0 C 0 s saiBol1.JH378197 5452323 22 + 8899380 AAGGTGCTCAAAGCATTAGTtt i saiBol1.JH378197 C 0 I 1685 s cebCap1.NW_016107633v1 1659283 22 - 2680843 AAGGTGCTGAAGGCATTAGTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405704 22 - 4471408 AAGGTGCTCAAAGCATTAGTTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5529850 3 + 5549422 ----------------CAG--- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111140629 19 - 145441459 --AGTACTTAAAGCATTTGTG- i mm10.chr7 C 0 C 0 s canFam3.chr1 4655692 22 - 122678785 AGGACGGTCAAAGCATTTGTTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 392324 22 + 643850 AAAGTGCTTAAAGCTTTTTTTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 612541 194 + 2501019 I e micMur3.chr22 3996404 190 - 30143674 I e calJac3.chr22 28602300 1679 + 49145316 I e colAng1.NW_012111697v1 2390248 314 + 4274983 I a score=1172067.000000 s hg38.chr19_GL383574v1_alt 125733 125 + 155864 ATcggagattcttaagagctgcactgttgacattttggggtagataattctt--tg----t--------------aggggctgtcttgtgcattatgggatgttcagcagcactt--ctggcctctacccactggatgctacccact s panTro5.chr19 36193353 125 + 61309027 ATcggagattcttaagagctgcactgttgacattttggggtagataattctt--tg----t--------------aggggctgtcttgtgcattatgggatgttcagcagcactt--ctggcctctacccactggatgctgcccact i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937581 125 + 64411610 ATcggagattcttaagagctgcactgttgacattttggggtagataattctt--tg----t--------------aggggctgtcttgtgcattatgggatgttcagcaggactt--ctggcctctacccactggatgctgcccact i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349290 125 - 8369475 ATcggagattcttaagagctgcactgttgacattttggggtagataattctt--tg----t--------------aggggctgtcttgtgcattatgggatgttcagcagcactt--ctggcctctacccactggatgctacccact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946507 125 - 106955855 ATcggggattcttaagagctgcactgttgacattttggggtggataattctt--tg----t--------------aggggctgtcttgtgcattatgggatgttcagcagcactt--ctggcctctacccactggatgctacccact i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262156 125 + 53671032 ATcggggattcttaagagctgcactattaacattttggggtggataattctt--tg----t--------------aggggctgtcttgtgcattacaggatgttcagcagcactt--ctggcctctgcccactggatgctacccact i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34716064 125 + 59248254 ATcggggattcttaagagctgcactattaacattttggggtggataattctt--tg----t--------------aggggctgtcttgtgcattacaggatgttcagcagcactt--ctggcctctgcccactggatgctacccact i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588423 125 - 13342542 ATcggggattcttaagagctgcactattaacattttggggtggataattctt--tg----t--------------aggagctgtcttgtgcattacaggatgttcagcagcactt--ctggcctctgcccactggatgctacccact i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512333 125 + 7714307 ATcggggattcttaagagctgcactattaacattttggggtggataattctt--tg----t--------------aggggctgtcttgtgcattacaggatgttcggcagcactt--ctggcctctacccactggatactacccact i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316303 125 + 50890351 ATcggggattcttaagagctgcactattaacattttggggtggataattctt--tt----t--------------aggggctgtcttgtgcattacaggatgttcggcagcactt--ctggcctctacccactggatgctacccact i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948282 125 - 2385121 ATcggggattcttaagagctgcactattaacattttggggtggataattctt--tg----t--------------aggggctgtcttgtgcattacaggatgttcagcagcactt--ctggcctctacccactggatgctacccact i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390562 125 + 4274983 ATcggggattcttaagagctgcactattaacattttggggtgggtaattctt--tg----t--------------aggggctgtcttgtgcgttacaggatgtttagcagcactc--ctggcctctaccctctggatgctacccact i colAng1.NW_012111697v1 I 314 C 0 s cebCap1.NW_016107633v1 1659305 125 - 2680843 ATcggggattcttaagagctgcactattgacattttggggtggataattctt--tg----t--------------agggactgtcctgtgcattgtaggatgttcagcagcactt--ctggcctctgctcactggatgctacccact i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405726 110 - 4471408 ATTGgggattcttaagagctgcactattgacattttggggtggataattctt--tg----t--------------aggggctgtcctgtgcattgta-gatgttcagcagcactt----------------ctggatgctacccact i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5529853 91 + 5549422 ------------TAGgag-------------attttagggtgggtcattatt--tgtt-tt--------------aggtgctgtcctgtttgttgtaggatgtacagcagaattt----------tatctactagatg----ccatt i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111140648 125 - 145441459 ATcagggtttctcagtgctagcactgttggcatattggggtggaagatccctgctc----t--------------gagagttactgtgtattttagaggatatttagcagagtctctctggcttctatccgctatatgct----act i mm10.chr7 C 0 C 0 s canFam3.chr1 4655714 106 - 122678785 AGcagagtttctcaatagtggcactactgacatcttgggttggacaattctt--tg----cctttgtatgaacaaaggagctgtcctgtgcatcgtaggatagttagcag---tt-------------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 392346 129 + 643850 GTCTgggtttctcaacagcaaccctatttacaatttgtactaggtaattatt--tgttgtt--------------gggagctgtcctgtgcattgtaggatgtctagcagcatcc--ttggactctacctactagatataactagct i dasNov3.JH563638 C 0 I 426 e proCoq1.NW_012149263v1 612541 194 + 2501019 I e micMur3.chr22 3996404 190 - 30143674 I e saiBol1.JH378197 5452345 1685 + 8899380 I e calJac3.chr22 28602300 1679 + 49145316 I a score=27892.000000 s hg38.chr19_GL383574v1_alt 125858 3 + 155864 agc s panTro5.chr19 36193478 3 + 61309027 agc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937706 3 + 64411610 agc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349415 3 - 8369475 agc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946632 3 - 106955855 acc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262281 3 + 53671032 agc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34716189 3 + 59248254 agc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588548 3 - 13342542 agc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512458 3 + 7714307 agc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316428 3 + 50890351 agc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948407 3 - 2385121 agc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390687 3 + 4274983 aac i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1659430 3 - 2680843 agc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405836 3 - 4471408 agc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5529944 3 + 5549422 ggc i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111140773 3 - 145441459 agc i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 612541 194 + 2501019 I e micMur3.chr22 3996404 190 - 30143674 I e dasNov3.JH563638 392475 426 + 643850 I e canFam3.chr1 4655820 0 - 122678785 C e saiBol1.JH378197 5452345 1685 + 8899380 I e calJac3.chr22 28602300 1679 + 49145316 I a score=488911.000000 s hg38.chr19_GL383574v1_alt 125861 60 + 155864 acttgcccagg-gtgacaacc-aaaacatct--cta------gacattgccagatgtTGGTAGG----GCAGAG--- s panTro5.chr19 36193481 60 + 61309027 acttgcccagg-gtgacaacc-aaaacatct--cta------gacattgccagatgtTGGTAGG----GCAGAG--- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937709 60 + 64411610 acttgcccagg-gtgacaacc-aaaacatct--cta------gacattgccagatgtTGGTAGG----GCAGAG--- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349418 60 - 8369475 acttgcccagg-gtgacaacc-aaaacatct--cta------gacattgccagatgtTGGTAGG----GCAGAG--- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946635 60 - 106955855 acttgcccagt-atgacaacc-aaaacatct--cta------gacattgccagatgtTGGTAGG----GCAGAG--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262284 60 + 53671032 acttgcccagt-gtgacaacc-aaagcatct--cca------gacattgccaGGTATTGGTAGG----GCAGAG--- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34716192 60 + 59248254 acttgcccagt-gtgacaacc-aaagcatct--cca------gacattgccaGGTATTGGTAGG----GCAGAG--- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588551 60 - 13342542 acttgcccagt-gtgacagcc-aaagcatct--cca------gacattgccaGGTATTGGTAGG----GCAGAG--- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512461 60 + 7714307 acttgcccagt-gtgacaacc-aaagcatct--cca------gacattgccaGGTATTGGTAGG----GCAGAG--- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316431 60 + 50890351 acttgcccagt-gtgacaacc-aaatcatct--cca------gacattgccaGGTATTGGTAGG----GCAGAG--- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948410 60 - 2385121 acttgcccagt-gtgacaacc-aaagcatct--cca------gacattgccaGGTATTGGTAGG----GCAGAG--- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390690 60 + 4274983 acttgcccagt-gtgacaatc-aaagcatct--cca------gacattgccaGGTATTGGTAGG----GCAGAG--- i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1659433 60 - 2680843 acttgtccagt-gtgacaatc-aaaacatct--tca------gacattgccagatgttggtgag----gcaggg--- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405839 60 - 4471408 acttgtccagt-gtgacaatc-aaaacatct--cca------gacattgccagatgtTGGTGAG----GCAGGG--- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5529947 57 + 5549422 acttccctagtcctgacaact--gagtgtct--cta------gactttgccaa--attgg-gga----gtaGGG--- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111140776 39 - 145441459 atttcctcagttgtgacaacc-----------------------------CAGATG--AGTAAG----GGGGCC--- i mm10.chr7 C 0 C 0 s canFam3.chr1 4655820 51 - 122678785 ------------gtgacaacc-aaaatgtgttacca------gacattgtcatatgtcccctga----gTCGAA--- i canFam3.chr1 C 0 I 19 s dasNov3.JH563638 392901 75 + 643850 gcttccccagttttgacaaacaaaaatgtgt--ccagaccttgACCTTGCTGGATATCGGAGGGAGTAGTGGGGGAA i dasNov3.JH563638 I 426 C 0 e proCoq1.NW_012149263v1 612541 194 + 2501019 I e micMur3.chr22 3996404 190 - 30143674 I e saiBol1.JH378197 5452345 1685 + 8899380 I e calJac3.chr22 28602300 1679 + 49145316 I a score=67405.000000 s hg38.chr19_GL383574v1_alt 125921 9 + 155864 --AAGGACACA s panTro5.chr19 36193541 9 + 61309027 --AAGGACACA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937769 9 + 64411610 --AAGGACACA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349478 9 - 8369475 --AAGGACACA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946695 9 - 106955855 --AAGGACACA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262344 9 + 53671032 --AGGGACACA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34716252 9 + 59248254 --AGGGACACA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588611 9 - 13342542 --AGGGACACA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512521 9 + 7714307 --AGGGACACA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316491 9 + 50890351 --AGGGACACA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948470 9 - 2385121 --AGGGACACA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390750 9 + 4274983 --AGGGACACG i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1659493 9 - 2680843 --agggacaca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405899 9 - 4471408 --AGGGACACA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5530004 8 + 5549422 --TGGGA-ACA i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111140815 8 - 145441459 --AGGAA-AGA i mm10.chr7 C 0 C 0 s dasNov3.JH563638 392976 9 + 643850 GAAGAGGCA-- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 612541 194 + 2501019 I e micMur3.chr22 3996404 190 - 30143674 I e canFam3.chr1 4655871 19 - 122678785 I e saiBol1.JH378197 5452345 1685 + 8899380 I e calJac3.chr22 28602300 1679 + 49145316 I a score=74474.000000 s hg38.chr19_GL383574v1_alt 125930 11 + 155864 AAATTATACTT s panTro5.chr19 36193550 11 + 61309027 AAATTATACTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937778 11 + 64411610 AAATTATACTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349487 11 - 8369475 AAATTATACTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946704 11 - 106955855 AAATTATACTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262353 11 + 53671032 TAATTATACTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34716261 11 + 59248254 TAATTATACTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588620 11 - 13342542 TAATTATACTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512530 11 + 7714307 TAATTATACTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316500 11 + 50890351 TAATTATACTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948479 11 - 2385121 TAATTATACTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390759 11 + 4274983 TAATTATACTT i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1659502 11 - 2680843 aaattatactt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405908 11 - 4471408 AAATTATACTT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5530012 4 + 5549422 AAGT------- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111140823 8 - 145441459 AAATCACT--- i mm10.chr7 C 0 C 0 s canFam3.chr1 4655890 11 - 122678785 GAAACATCCTC i canFam3.chr1 I 19 C 0 s dasNov3.JH563638 392985 11 + 643850 AAATCCTTCCT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 612541 194 + 2501019 I e micMur3.chr22 3996404 190 - 30143674 I e saiBol1.JH378197 5452345 1685 + 8899380 I e calJac3.chr22 28602300 1679 + 49145316 I a score=1111582.000000 s hg38.chr19_GL383574v1_alt 125941 93 + 155864 TTCCCCACT--------------------TGTTGAGAACCACTGTGTT-AAAGAATTGAATTACTAATTA--CTAA-CTTATAAAATGGAATAAAGTAGAATGTTTGGTTCCCTGGG s panTro5.chr19 36193561 93 + 61309027 TTCCCCACT--------------------TGTTGAGAACCACTGTGTT-AAAGAATTGAATTACTAATTA--CTAA-CTTATAAAATGGAATAAAGTAGAATGTTTGGTTCCCTGGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937789 93 + 64411610 TTCCCCACT--------------------TGTTGAGAACCACTGTGTT-AAAGAATTGAATTACTAATTA--CTAA-CTTATAAAATGGAATAAAGTAGAATGTTTGGTTCCCTGGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349498 93 - 8369475 TTCCCCACT--------------------TGTTGAGAACCACTGTGTT-AAAGAATTGAATTACTAATTA--CTAA-CTTATAAAATGGAATAAAGTAGAATGTTTGGTTCCCTGGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946715 93 - 106955855 TTCCCCACT--------------------TGTTGAGAACCACTGTGTT-AAAGAATTGAATTACTAATTA--CTAA-TTTATAAAGTGGAATAAAATAGAATGTTTGGTTCCTTGGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262364 86 + 53671032 TTCCCCACT--------------------TGTTGAGAACCACTGTGTT-AAAGAATTG-------AATTA--CTAA-TTTATAAAATAGAATAAAGGAGAATGTTTGGTTCCCTGGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34716272 86 + 59248254 TTCCCCACT--------------------TGTTGAGAACCACTGTGTT-AAAGAATTG-------AATTA--CTAA-TTTATAAAATAGAATAAAGGAGAATGTTTGGTTCCCTGGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588631 86 - 13342542 TTCCCCACT--------------------TGTTGAGAACCACTGTGTT-AAAGAATTG-------AATTA--CTAA-TTTATAAAATAGAATAAAGGAGAATGTTTGGTTCCCTGGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512541 86 + 7714307 TTCCCCACT--------------------TGTTGAGAACTACTATGTT-AAAGAATTG-------AATTA--CTAA-TTTATAAAATAGAATAAAGTAGAATGTTTGGTTCCCTGGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316511 86 + 50890351 TTCCCCACT--------------------TGTTGAGAACCACTGTGTT-AAAGAATTG-------AATTA--CTAA-TTTATAAAATAGAATAAAGTAGAATGTTTGGTTCCCTGGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948490 86 - 2385121 TTCCCCACT--------------------TGTTGAGAACTACTATGTT-AAAGAATTG-------AATTA--CTAA-TTTATAAAATAGAATAAAGTAGAATGTTTGGTTCCCTGGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390770 93 + 4274983 TTCCCCATT--------------------TGTTGAGAACCACTATGTT-AAAGAATTGAATTACTAATTA--CTAA-TTTATAAAATGGAATAAAGTAGAATGTTTGGTTCCCTGGG i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1659513 93 - 2680843 tcccccact--------------------tgttgagaaccactgTGTT-AAAGAATTGAATGACTAATTA--CTAA-TTTATAAAATGGAATAAAGTAGAATGTTGGGTTCCCTGGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 405919 93 - 4471408 TTCCCCACT--------------------TGTTGAGAACCACCGTGTT-AAAGAATTGAATGACTAATTA--CTAA-TTTATAAAATGGAATGAAGTAGAATGTTTGGTTCCCTGGG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3996594 94 - 30143674 TTCCCCACT--------------------TATTGAAAACCACTGTGTT-AAAGGATTGACTGCTGAATTG--CTAATTTTGTAAAATGGAATAAAATAGAATGTTTGGTTCCCTGGG i micMur3.chr22 I 190 C 0 s proCoq1.NW_012149263v1 612735 94 + 2501019 TTCCCCACC--------------------TGTTGAAAACCACTGTGTT-AAAGGATTGACTGCTGAATTA--TTAATTTTGTAAAATGGAATAAAGTAGAATGTTTGGTTCCCCGGG i proCoq1.NW_012149263v1 I 194 I 118 s otoGar3.GL873654 5530016 90 + 5549422 ----CCTCT--------------------TGTT-AAAACCACTATGTTAAAAGGATTGACTGCTAAATTA--CTTCTTTTATAAAATGGAATAAAGTAGAATGTTTGGTTTTCTGGG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111140831 111 - 145441459 TTCCCTAATGCCTTAAGGTAGGTCAGCTATGGTGAGA---ACTATGTT-AAAGGATTGAATACTGAGTTA--CTAATCTTATAAGATGGAGTAAAGTACTATGCTTAGTTCTGTGGC i mm10.chr7 C 0 C 0 s canFam3.chr1 4655901 96 - 122678785 TTCTCCACC--------------------TGTTGAGAACCATTGTGTT-AAAGGATTGAAAGCTGACTTCTTCTAATTTTGTAAAATGGGATAAAAAAGAATGTCTGGGTCCTTGGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 392996 65 + 643850 GTCCCCACT--------------------TGTTGAAAACCATTGTGCT-AAAGGA-----------------TGAA--------------ATGAAGTGGATTGTTTAGTTCCTTGGG i dasNov3.JH563638 C 0 C 0 e saiBol1.JH378197 5452345 1685 + 8899380 I e calJac3.chr22 28602300 1679 + 49145316 I a score=213898.000000 s hg38.chr19_GL383574v1_alt 126034 23 + 155864 ATTAAAGCCATTTGTTAGTTTCT s panTro5.chr19 36193654 19 + 61309027 ATTAAAGCCATTT----GTTTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937882 19 + 64411610 ATTAAAGCCATTT----GTTTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349591 23 - 8369475 ATTAAAGCCATTTGTTAGTTTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946808 23 - 106955855 ATTGAAGCCATTTGTTAGTTTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262450 23 + 53671032 ACTGAAGCCATTTGTTAGTTTCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34716358 23 + 59248254 ACTGAAGCCATTTGTTAGTTTCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588717 23 - 13342542 ACTGAAGCCATTTGTTAGTTTCT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512627 23 + 7714307 ACTGAAGCCATTTGTTAGTTTCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316597 23 + 50890351 ACTGAAGCCATTTGTTAGTTTCT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948576 23 - 2385121 ACTGAAGCCATTTGTTAGTTTCT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390863 23 + 4274983 ACTGAAGCCATTTGTTAGTTTCT i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1659606 23 - 2680843 ATTAAAGCCGTTTGTTAGTTTCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 406012 23 - 4471408 ATTAAAGCCGTTTGTTAGTTTCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3996688 19 - 30143674 ATTGGAGACCTTTGTTA----CT i micMur3.chr22 C 0 C 0 s otoGar3.GL873654 5530106 13 + 5549422 ATCAGAGCCCTT----------T i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111140942 23 - 145441459 CTTATACTCttttgtttattttt i mm10.chr7 C 0 I 731 s canFam3.chr1 4655997 23 - 122678785 ATTGGAGCCATTTGTTAGTTTCT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 393061 23 + 643850 ATTGGAGCCATTATTTAGTTTCA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 612829 118 + 2501019 I e saiBol1.JH378197 5452345 1685 + 8899380 I e calJac3.chr22 28602300 1679 + 49145316 I a score=561324.000000 s hg38.chr19_GL383574v1_alt 126057 56 + 155864 ATTTTCATATCTGACATTCTCATA-ATTCTTAGTTTGCTAC-TT-AGAGTATGCTGTG--C s panTro5.chr19 36193673 56 + 61309027 ATTTTCATATCTGACATTCTCATA-ATTCTTAGTTTGCTAC-TT-AGAGTATGCTGTG--C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937901 56 + 64411610 ATTTTCATATCTGACATTCTCATA-ATTCTTAGTTTGCTAC-TT-AGAGTATGCTGTG--C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349614 56 - 8369475 ATTTTCATATCTGACATTCTCATA-ATTCTTAGTTTGCTAC-TT-AGAGTATGCTGTG--C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946831 53 - 106955855 ATTTTCATATCTGACATTCTCATA-A---TTAGTTTGCTAC-TT-AGAGTATGCTGTA--C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262473 56 + 53671032 ACTTCCATATCTGACATTCTCATA-ATTGTTAGTTTGCTAC-TT-AGAGCGTACTGTG--C i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34716381 56 + 59248254 ACTTCCATATCTGACATTCTCATA-ATTCTTAGTTTGCTAC-TT-AGAGTGTACTGTG--C i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588740 56 - 13342542 ACTTCCATATCTGACATTCTCATA-ATTCTTAGTTTACTAC-TT-AGAGTGTACTGTG--C i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512650 57 + 7714307 ACTTCCATATCTGACATTCTCATA-ATTCTTAGTTTGCTACTTT-AGAGTGTACTGTG--C i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316620 56 + 50890351 ACTTCCATATCTGACATTCTCATA-ATTCTTAGTTTGCTAC-TT-AGAGTGTACTGTG--C i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948599 56 - 2385121 ACTTCCATATCTGACATTCTCATA-ATTCTTAGTTTGCTAC-TT-AGAGTGTACTGTG--C i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390886 56 + 4274983 ACTTCCATATCTGACATTCTCATA-ATTCTTAGTTTGCTAC-TT-AGAGTGTGCTGTG--C i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1659629 54 - 2680843 TGTTCC--ATCTGATATTCTCATA-ATTCTTAGTTTGTTAC-TT-AGAGTATGCTGTG--C i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 406035 56 - 4471408 AGTTCC--ATCTGACATTATCGTA-ATTATTAGTTTGTTAC-TT-AGAGTATGCTGTGTAC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3996707 57 - 30143674 GTTTCAGTATCTGACATTCTCATATGTTCTTAGTTTGCTGC-TT-AGGTTATGCTGTG--C i micMur3.chr22 C 0 I 51 s otoGar3.GL873654 5530119 58 + 5549422 GTTTCTATATCTGACATTCTTATATGTTCTTGGTTTGCTGC-TTAAGATTATGCTGTG--C i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4656020 57 - 122678785 ATTCCAGTATTTGACAGTCTCATACATTTTTGGTTTGCCAC-TT-AGATTTTGCTATT--G i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 393084 57 + 643850 ATTCCATTGTCTGATATTCTCATACATTCTTAGTTTTCCAC-TT-AGATTTTGCTTTT--C i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 612829 118 + 2501019 I e mm10.chr7 111140965 731 - 145441459 I e saiBol1.JH378197 5452345 1685 + 8899380 I e calJac3.chr22 28602300 1679 + 49145316 I a score=384000.000000 s hg38.chr19_GL383574v1_alt 126113 46 + 155864 TCTATCAGCTTCAGCTAGTGTTCAGGTATA-----CCTTCTGTGCA--------Ctttc s panTro5.chr19 36193729 46 + 61309027 TCTATCAGCTTCAGCTAGTGTTCAGGTATA-----CCTTCTGTGCA--------Ctttc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39937957 46 + 64411610 TCTATCAGCTTCAGCTAGTGTTCAGGTATA-----CCTTCTGTGCA--------Ctttc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349670 46 - 8369475 TCTATCAGCTTCAGCTAGTGTTCAGGTATA-----CCTTCTGTGCA--------Ctttc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946884 46 - 106955855 TCTATCAGCTTCAGCTAGTGTTCAGGTATA-----CCTTCTGTGCA--------Ctttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262529 46 + 53671032 TCTATCAGCTTCAGCTAGCATTCAGGTATA-----CCTTCTGTGCA--------Ctttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34716437 46 + 59248254 TCTATCAGCTTCAGCTAGCGTTCAGGTATA-----CCTTCTGTGCA--------Ctttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588796 46 - 13342542 TCTATCAGCTTCAGCTAGCGTTCAGGTATA-----CCTTCTGTGCA--------Ctttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512707 46 + 7714307 TCTATCAGCTTCAGCTAGCGTTCAGGTATA-----CCTTCTGTGCA--------Ctttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316676 46 + 50890351 TCTATCAGCTTCAGCTAGTGTTCACGTATA-----CCTTCTGTGCA--------Ctttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948655 46 - 2385121 TCTATCAGCTTCAGCTAGCGTTCAGGTATA-----CCTTCTGTGCA--------Ctttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390942 54 + 4274983 TCTATCAGCTTCAGCTAGCGTTCAGGTATA-----CCTTCTGTGCACtttccttctttt i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1659683 40 - 2680843 TCTG------TCAGCTAGTGTTTAAGTATA-----CCTTCTGTGCA--------Cttct i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 406091 40 - 4471408 TCTA------TCAGCTAGTGTTTAAGTATA-----CCTTCTGTGCt--------ttttt i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5530177 37 + 5549422 ------CCTTTCAGCCAGTGTCCAGGTGTG-----TCTT---TGTG--------CTTTC i otoGar3.GL873654 C 0 I 4 s canFam3.chr1 4656077 45 - 122678785 TCTA------TCAGCCAGCTTTGAGGTGTATCTTCCCTTCTGTGTG--------CTTCC i canFam3.chr1 C 0 I 2 s dasNov3.JH563638 393141 40 + 643850 CCTA------TCAACCAGATTTGAGGTATA-----TGTTTTGTATG--------CTCTC i dasNov3.JH563638 C 0 I 4 e proCoq1.NW_012149263v1 612829 118 + 2501019 I e micMur3.chr22 3996764 51 - 30143674 I e mm10.chr7 111140965 731 - 145441459 I e saiBol1.JH378197 5452345 1685 + 8899380 I e calJac3.chr22 28602300 1679 + 49145316 I a score=20358.000000 s hg38.chr19_GL383574v1_alt 126159 12 + 155864 tttttttttttt-- s panTro5.chr19 36193775 11 + 61309027 -ttttttttttt-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938003 10 + 64411610 --tttctttctt-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349716 9 - 8369475 ---ttttttttt-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946930 5 - 106955855 -------ttttt-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262575 8 + 53671032 ----tttttttt-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34716483 8 + 59248254 ----tttttttt-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4588842 8 - 13342542 ----tttttttt-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512753 8 + 7714307 ----tttttttt-- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316722 8 + 50890351 ----tttttttt-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948701 8 - 2385121 ----tatttttt-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2390996 8 + 4274983 ----tttttttt-- i colAng1.NW_012111697v1 C 0 C 0 s cebCap1.NW_016107633v1 1659723 10 - 2680843 ----ttttttattt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 406131 6 - 4471408 ----tttttt---- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 612829 118 + 2501019 I e micMur3.chr22 3996764 51 - 30143674 I e dasNov3.JH563638 393181 4 + 643850 I e otoGar3.GL873654 5530214 4 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e canFam3.chr1 4656122 2 - 122678785 I e saiBol1.JH378197 5452345 1685 + 8899380 I e calJac3.chr22 28602300 1679 + 49145316 I a score=1166263.000000 s hg38.chr19_GL383574v1_alt 126171 145 + 155864 ttttttttttagatgaagtctcactctgttgcccaggctagagtgctgtggcgtgatcttggctcactgcaacctctgtctcccgggttcaagcgattctcctgtctcagcctccctagtagctgggactacaggtgtgtgccac s panTro5.chr19 36193786 145 + 61309027 ttttttttttagatgaagtctcactctgttgcccaggctagagtgctgtggcgtgatcttggctcactgcaacctctgtctcctgggttcaagcgattcacctgcctcagcctccctagtagctgggactacaggtgtgtgccac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938013 145 + 64411610 tttttttttagtatgaagtctcactctgttgcccaggctagactgctgtggcgtgatcttggctcactgcaacctctgtctcccgggttcaagcgattctcctgcctcagcctccctagtagctgggactacaggtgtgtgccac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349725 145 - 8369475 ttttttttttagatgaagtctcactctgttgcccaggctagagtgctgtggcgtgatcttggctcactgcaacctctgtctcccgggttcaagcgattctcctgcctcagcctccctagtagctgggactacaggtgtgtgccac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63946935 145 - 106955855 tttttttttgagatagagtctcactctgttacccaggctagagtgctgtggcgtgatcttggctcactgcaacctctgtctcccaggttcaggcgattctcctgcctcagcctccctagtagctgggactacaggtgtgtgccac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262583 144 + 53671032 t-cttttttgagatggggtctcactctgttgcccaggctagagtgctgtggcacagtcttggctgactgcaacctctatctcccaggttcaagtgattctcctgcctcaggctaactagtagctgggactacaggtgtgcgccat i rheMac8.chr19 C 0 I 32 s macFas5.chr19 34716491 144 + 59248254 t-cttttttgagatggggtctcactctgttgcccaggctagagtgctgtggcacagtcttggctgactgcaacctctatctcccaggttcaagtgattctcctgcctcaggctaactagtagctgggactacaggtgtgcgccat i macFas5.chr19 C 0 I 5 s macNem1.NW_012011689v1 4588850 145 - 13342542 tccttttttgagatggggtctcactctgttgcccaggctagagtgctgtggcacagtcttggctcactgcaacctctatctcccaggttcaagtgattctcctgcctcaggctaactagtagctgggactacaggtgtgcgtcat i macNem1.NW_012011689v1 C 0 I 32 s cerAty1.NW_012005268v1 5512761 145 + 7714307 ttcttttttgagatggggtctcactctgttgcctaggctagagtgctgtggcacagtcttggctcactgcaacctctatctcccaggttcgagtgattctcctgcctcaggctaactagtagctgggactacaggtgtgcgccat i cerAty1.NW_012005268v1 C 0 I 32 s chlSab2.chr6 29316730 145 + 50890351 ttctttttttagatggggtctcactctgttgcccaggctagagtgctgtggcacagtcttggctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcaggctaactagtagctgggactacaggtgtgcgccat i chlSab2.chr6 C 0 I 32 s manLeu1.NW_012102454v1 948709 145 - 2385121 ttcttttttgagatggggtcttactctgttgcctaggctagagtgctgtggcacagtcttggctcactgcaacctctatctcccaggttcgagtgattctcctgcctcaggctaactagtagctgggactacaggtgtgcgccat i manLeu1.NW_012102454v1 C 0 I 32 s colAng1.NW_012111697v1 2391004 145 + 4274983 ttcttttttgagatgggatctcactctgttgcccaggctagagtgctgtggcacagtcttggctcactgcaacctctatctcccaggttcaactgattctcctgcctcagcctaactagtagctgggactacaggtgtgcgctgt i colAng1.NW_012111697v1 C 0 I 10 s saiBol1.JH378197 5454030 144 + 8899380 TTAttttttgagatggagtcccactctgttgcccaggctggagtgtagtggggcgatctcagctcactgcaacttccacctcccaggttcaagcaattatcttgcctcagcctcttgaatag-cgggactacaggtttgtgccac i saiBol1.JH378197 I 1685 C 0 s cebCap1.NW_016107633v1 1659733 145 - 2680843 ttattttttgagatggaatctcactctgttgcccaggctggagtgtggtggtgtgatctcggctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcttgaatagccggaactacaggtttgtgccac i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 406137 145 - 4471408 tttttttttgatatggagtctcactctgttgcccaggctggagtgtagtggtgcgatctcggctcactgcaacctccaccttccaggttcaagcaattctcctgtctcagcctcttgaatagctgggactataggtttgtgccac i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 612829 118 + 2501019 I e micMur3.chr22 3996764 51 - 30143674 I e dasNov3.JH563638 393181 4 + 643850 I e otoGar3.GL873654 5530214 4 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e canFam3.chr1 4656122 2 - 122678785 I e calJac3.chr22 28602300 1679 + 49145316 I a score=18691.000000 s hg38.chr19_GL383574v1_alt 126316 6 + 155864 cacacc s panTro5.chr19 36193931 6 + 61309027 cacacc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938158 6 + 64411610 cacacc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349870 6 - 8369475 cacacc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63947080 6 - 106955855 cacacc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34716640 6 + 59248254 cacacc i macFas5.chr19 I 5 I 3 s colAng1.NW_012111697v1 2391159 6 + 4274983 cacacc i colAng1.NW_012111697v1 I 10 I 13 s saiBol1.JH378197 5454174 6 + 8899380 cacgtt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1659878 6 - 2680843 cacgtt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 406282 6 - 4471408 cacatt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 612829 118 + 2501019 I e micMur3.chr22 3996764 51 - 30143674 I e dasNov3.JH563638 393181 4 + 643850 I e otoGar3.GL873654 5530214 4 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e chlSab2.chr6 29316875 32 + 50890351 I e canFam3.chr1 4656122 2 - 122678785 I e calJac3.chr22 28602300 1679 + 49145316 I e manLeu1.NW_012102454v1 948854 32 - 2385121 I e cerAty1.NW_012005268v1 5512906 32 + 7714307 I e macNem1.NW_012011689v1 4588995 32 - 13342542 I e rheMac8.chr19 30262727 32 + 53671032 I a score=20336.000000 s hg38.chr19_GL383574v1_alt 126322 11 + 155864 caactaacttt s panTro5.chr19 36193937 11 + 61309027 caactaacttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938164 11 + 64411610 caactaacttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349876 11 - 8369475 caactaacttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63947086 11 - 106955855 cagctaacttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34716649 11 + 59248254 ccacacaccat i macFas5.chr19 I 3 I 7 s saiBol1.JH378197 5454180 11 + 8899380 tggctaatttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1659884 11 - 2680843 tggctaatttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 406288 11 - 4471408 tggctaatttt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 612829 118 + 2501019 I e micMur3.chr22 3996764 51 - 30143674 I e dasNov3.JH563638 393181 4 + 643850 I e otoGar3.GL873654 5530214 4 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e chlSab2.chr6 29316875 32 + 50890351 I e canFam3.chr1 4656122 2 - 122678785 I e calJac3.chr22 28602300 1679 + 49145316 I e colAng1.NW_012111697v1 2391165 13 + 4274983 I e manLeu1.NW_012102454v1 948854 32 - 2385121 I e cerAty1.NW_012005268v1 5512906 32 + 7714307 I e macNem1.NW_012011689v1 4588995 32 - 13342542 I e rheMac8.chr19 30262727 32 + 53671032 I a score=5052.000000 s hg38.chr19_GL383574v1_alt 126333 2 + 155864 tt s panTro5.chr19 36193948 2 + 61309027 tc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938175 2 + 64411610 tt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349887 2 - 8369475 tt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63947097 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262759 2 + 53671032 cc i rheMac8.chr19 I 32 C 0 s macFas5.chr19 34716667 2 + 59248254 cc i macFas5.chr19 I 7 C 0 s macNem1.NW_012011689v1 4589027 2 - 13342542 cc i macNem1.NW_012011689v1 I 32 C 0 s cerAty1.NW_012005268v1 5512938 2 + 7714307 cc i cerAty1.NW_012005268v1 I 32 C 0 s chlSab2.chr6 29316907 2 + 50890351 cc i chlSab2.chr6 I 32 C 0 s manLeu1.NW_012102454v1 948886 2 - 2385121 cc i manLeu1.NW_012102454v1 I 32 C 0 s saiBol1.JH378197 5454191 2 + 8899380 tt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1659895 2 - 2680843 tt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 406299 2 - 4471408 tt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 612829 118 + 2501019 I e micMur3.chr22 3996764 51 - 30143674 I e dasNov3.JH563638 393181 4 + 643850 I e otoGar3.GL873654 5530214 4 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e canFam3.chr1 4656122 2 - 122678785 I e calJac3.chr22 28602300 1679 + 49145316 I e colAng1.NW_012111697v1 2391165 13 + 4274983 I a score=739577.000000 s hg38.chr19_GL383574v1_alt 126335 87 + 155864 gtatttttagtagagacagggtttcaccatg-ttggccaggctggtctcgatctcctgacctcgtcatccacccgcctcggccttcca s panTro5.chr19 36193950 87 + 61309027 gtatttttagtagagacagggtttcaccatg-ttggccaggctggtctggatctcctgacctcgtcatccacccgcctcggccttcca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938177 87 + 64411610 gtatttttagtagagacagggtttcaccatg-ttggccaggctggtctggatctcctgacctcgtcatccacccgccttggccttcca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349889 87 - 8369475 atatttttagtagagacagcgtttcaccatg-ttggccaggctggtctcgatctcctgacctcgtcatccacccgcctcggccttcca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63947099 87 - 106955855 gtatttttagtagagacagggtttcaccatg-ttggccaggctggtctcgatctcctgacctcatcatccacccgcctcggccttcca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262761 87 + 53671032 gtctttttagtaaagacggggtttcaccatg-ttggccaggctgatctcgatctcctgacctcgtgatccacctgcctcagccttcca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34716669 87 + 59248254 gtctttttagtaaagacggggtttcaccatg-ttggccaggctgatctcgatctcctgacctcgtgatccacctgcctcagccttcca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4589029 87 - 13342542 gtctttttagtaaagacggggtttcaccatg-ttggccaggctgatctcgatctcctgacctcgtgatccacctgcctcagccttcca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5512940 87 + 7714307 gtctttttagtaaagacggggtttcaccatg-ttggccaggctgatctcgatctcctgacctcgtgatccacccgcctcagccttcca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316909 87 + 50890351 atctttttagtaaagacggggtttcaccatg-ttggccagactgatctcgatctcctgacctcgtgatccacccgcctcagccttcca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948888 87 - 2385121 gtctttttagtaaagacggggtttcaccatg-ttggccaggctgatctcgatctcctgacctcgtgatccacccgcctcagccttcca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2391178 87 + 4274983 gtctttttagtagagacggggtttcaccatg-ttggccaggctgatctcgatctcctgacctcgtgatccacccgccttagactttca i colAng1.NW_012111697v1 I 13 C 0 s saiBol1.JH378197 5454193 88 + 8899380 gtatttttggtagagatggggcttcacctggcttggcctggctgctcttgatctcctgacttcatgatccacctgccttggccttcca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1659897 87 - 2680843 gtatttttggtagagatggggcttcaccatg-ttggcctggctgctcttgatctcctgacttcatgatccacctgcctcggccttcca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 406301 87 - 4471408 gtatttttggtagagatggggcttcaccatg-ttagcctggctgctcttgatctcctgacttcatgatccacctgccttggccttcca i aotNan1.NW_018505377v1 C 0 I 11 e proCoq1.NW_012149263v1 612829 118 + 2501019 I e micMur3.chr22 3996764 51 - 30143674 I e dasNov3.JH563638 393181 4 + 643850 I e otoGar3.GL873654 5530214 4 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e canFam3.chr1 4656122 2 - 122678785 I e calJac3.chr22 28602300 1679 + 49145316 I a score=159111.000000 s hg38.chr19_GL383574v1_alt 126422 32 + 155864 gagtgctgggattacaggtgtgagccaccacg s panTro5.chr19 36194037 32 + 61309027 gagtgctgggattacaggtgtgagccaccacg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938264 32 + 64411610 gagtgctgggtttacaggtgtgagccaccacg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6349976 32 - 8369475 gagtgctggcattacaggtgtgagccaccacg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63947186 32 - 106955855 gagtgctgggattacaggtgtgagccaccgcg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262848 32 + 53671032 aagtgctgggattacaggcgtgagccaccgcg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34716756 32 + 59248254 aagtgctgggattacaggcgtgagccaccgcg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4589116 32 - 13342542 aagtgctgggattacaggcgtgagccaccgcg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5513027 32 + 7714307 aagtgctgggattacaggcgtgagccaccgct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29316996 32 + 50890351 aagtgctgggattacaggcgtgagccaccgtg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 948975 32 - 2385121 aagtgctgggattacaggcgtgagccaccgcg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2391265 32 + 4274983 aagtgcagggattacaggtgtgagccaccgcg i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5454281 11 + 8899380 ------------------CATGGTCCGTG--- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1659984 11 - 2680843 ------------------CGTGGTCCGTG--- i cebCap1.NW_016107633v1 C 0 C 0 e proCoq1.NW_012149263v1 612829 118 + 2501019 I e micMur3.chr22 3996764 51 - 30143674 I e dasNov3.JH563638 393181 4 + 643850 I e otoGar3.GL873654 5530214 4 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e canFam3.chr1 4656122 2 - 122678785 I e aotNan1.NW_018505377v1 406388 11 - 4471408 I e calJac3.chr22 28602300 1679 + 49145316 I a score=2522400.000000 s hg38.chr19_GL383574v1_alt 126454 311 + 155864 cccggccCCTTCTGTGCACTTTCATTGAAAGAACTAGGAgctgggcgcggtggctcatgtctgtagtaccagcattttgggagccgaggcagaaggattgcttgagcccaggagtttgagaccagcctgggcaatgtagagagaccccatctctacaaaaaatcaaaaaataaaaattagctgagctacttaggaggctgaggt-gggaggttcacttga----gggaggtcaaagctgcagtgagctatgatcgtgcc-actgtgctctagcctggggcatggagcaagtctc----------aa-aaacaaaaacaaaaacaaaaa s panTro5.chr19 36194069 307 + 61309027 cctggccCCTTCTGTGCACTTTCATTGAAAGAACTAGGAgctgggtgcggtggctcatgtctgtagtaccagcattttgggagccgaggcagaaggattgcttgagcccaggagtttgagaccagcctgggcaatgtagagagaccccatctctacaaaaaatcaaaaaataaaaattagctgagctacttaggaggctgaggt-gggaggttcacttga----gggaggtcaaagctgcagtgagctatgatcgtgcc-actgtgctctagcctggggcatggagcaagtctc----------aa-----aaaaacaaaaacaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938296 307 + 64411610 cctggccCCTTCTGTGCACTTTCATTGAAAGAACTAGGAgctgggtgcggtggctcatgtctgtagtaccagcattttgggagccgaggcagaaggattgcttgagcccaggagtttgagaccagcctggttaatgtagagagaccccatctctacaaaaaatcaaaaaataaaaattagctgggctacttaggaggctgaggt-gggaggttcacttga----gggaggtcaaagctgcagtgagctatgatcgtgcc-actgtgctctagcctggggcatggagcaagtctc----------aa-----aaaaacaaaaacaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6350008 312 - 8369475 cccggccCCTTCTGTGCACTTTCATTGAAAGAACTAGGAgctgggcgcggtagctcatgtctgtagtaccagcgttttgggagccgaagcagaaggattgcttgagcccaggagtttgagaccagcctgggcaatgtagagagaccccatctctataaaaaatcaaaaaataaaaattagctgagctacttaggaggctgaggt-gggaggttcacttga----gggaggtcaaagctgcagtgagctatgatcgtgcc-actgtgctctagcctggggcatggagcaagTCTC----------Aaaaaacaaaaacaaaaacaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63947218 305 - 106955855 cccagccCCTTCTGTGCACTTTCATTGAAAGATCTAGGAgctgggcacagtggcttgtgtctgtagtaccagcattttgggagccgaggcagaaggatcgcttgagtccaggagtttgagaccagcctgggcaatgtagggagaccccatctctacaaaaaatcaaaaaataaaaatcagctgagctacttaggaggctgaggt-gggaggttcacttga----gggaggtcaaggctgcagtgagctatgatcctgcc-actgtactctagcctggggcatggagcaagtctc----------aa-------aaacaaaaacaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30262880 303 + 53671032 ccgggcTTTTTCTGTGTACTTTCATTGAAAGAGCTAGGggctgggcacggtggctcatgtctgtagtaccagcactttgggagctgaggcagaaggatcgcttgagcccaggagtttgagaccagcctgggcaatgtaggaagaccccatctctacaaaaaatcaaaaaataaaaattagctaagctacttaggaggctgaggt-gggaggaacatttgagcctgggaggtcaaggctgcagtgagctatgatcatgcc-attgtactctagcctgggccacagagcaagtct-----------------------aaaaaaaaaaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34716788 308 + 59248254 ccgggcTTTTTCTGTGTACTTTCATTGAAAGAGCTAGGggctgggcacggtggctcatgtctgtagtaccagcactttgggagctgaggcagaaggatcgcttgagcccaggagtttgagaccagcctgggcaatgtaggaagaccccatctctacaaaaaatcaaaaaataaaaattagctaagctacttaggaggctgaggt-gggaggaacatttgagcctgggaggtcaaggctgcagtgagctatgatcatgcc-attgtactctagcctgggccacagagcaagtctc------------------aaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4589148 321 - 13342542 ccgggcTTTTTCTGTGTACTTTCATTGAAAGAGCTAGGggctgggcacggtggctcatgtctgtagtaccagcactttgggagctgaggcagaaggatcgcttgagcccaggagtttgagaccagcctgggcaatgtaggaagaccccatctctacaaaaaatcaaaaaataaaaattagctaagctacttaggaggctgaggt-gggagaaacatttgagcctgggaggtcaaggctgcagtgagctatgatcatgcc-attgtactctagcctgggccacagagcaagTCTCaaaaaaaaaaaa-----aaaaaaaaaaaaaaaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5513059 307 + 7714307 tcgggcTCTTTCTGTGTACTTTCATTGGAAGAGCTAGGggctgggcgcggtggctcatgtctgtagtaccagcactttgggagctgaggcagaaggatcgcttgagcccaggagtttgagaccagcctgggcaatgtaggaagaccccatctctacaaaaaatcaaaaaataaaaattagctaagctacttaggaggctgaggt-gggaggaacatttgagcctgggaggtcaaggctgcagtgagctatgatcatgcc-attgtactctagcctgggccacaaaaaaa--------------aaa-----aaaaaaaaaaaaaaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29317028 311 + 50890351 ccgggcTCTTTCTGTGTACTTTCATTGAAAGAGCTAGGggctgggcgcggtggctcatgtctgtagtaccagcactgtgggagctgaggcagaaggatcgcttgagcccaggagtttgagaccagcctgggcaatgtaagaagaccccatctctacaaaaaatcaaaaaataaaaattagctaagctacttaggaggctgaggtaaggaggaacatttgagcctgggaggtcaaggctgcagtgagctatgatcatgccaattgtactctagcctgggccacagagcaagtctc-----------------aaaaaaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 949007 311 - 2385121 ccaggcTCTTTCTGTGTACTTTCATTGGAAGAGCTAGGggctgggcgcggtggctcatgtctgtagtaccagcactttgggagctgaggcagaaggatcgcttgagcccaggagtttgagaccagcctgggcaatgtaggaagaccccatctctacaaaaaatcaaaaaataaaaattagctaagctacttaggaggctgaggt-gggaggaacatttgagcctgggaggtcaaggctgcagtgagctatgatcatgcc-attgtactctagcctgggccacagagcaagTCTC----------aa-----aaaaaaaaaaaaaaaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2391297 306 + 4274983 ctgggcTCTTTCTGTGCACTTTCATTGAAAGAGCTAGGggctgggcggggtggctcatgtctgtagtaccagcactttgggagccgaggcagaaggattgcttgagcccaggagtttgagaccagcctgggcaatgtaggaagaccccatctctacaaaaaatcaaaaaataaaaattagctaagctacttaggaggctgaggt-gggaggaacacttgagcctgggaggttaaggctgcagtgagcaatgatcatgcc-attgtactgtagcctgggccacagagcaagtctc--------------------aaaaaaaaaaaaaa i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5454292 306 + 8899380 CCCAGCCACTTCTGTGCACTTTCATTGAAATTGCTAGGGACGgggcatggtgtctcatgtctgcagtaccagcactttgggagccgagacaggaggatcacttgagcccagaagtttgagaccagcctgggcaatgtagggagatcccatctctacaaaaaatttaaaaataaaaattagccaagctacttaggaggctgagat-gggaggatcacttgagcctgggaggtgaaggccgcagtgagctatgatcgtgcc-actgtactctagcctgggccacagagcaagtctc--------------------aaaaaaaaaaaaaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1659995 299 - 2680843 CTCAGCCACTTCTGTGCACTTTCATTGAAATTGCTAGGGACAgggcatggtgtctcatgtctgtaataccagcactttgggaaccaagacaggaggatcacttgagcccaggagtttgagaccagcctgggcaatgtagggagatcccatctctacaaaaaatttaaaaataaaaattagccaagctacttaggaggctgaggt-gggaggatcacttgagcctgggaggtgaaggctgcagtgagctat-------ca-actatactctagcctgggccacagagcaagtcta--------------------aaaaaaaaaaaaaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 406399 306 - 4471408 CCCAGCCACTTCTGTGCACTTTCATTGAAATTGCTAGGGACGgggcatggtgtctcatgtctgtagtaccagcactttgggagccgagacaggaggatcacttgagcccaggagtttgagaccagcctgggcaatgtggggagatcccatctctacaaaaaatttaaaaataaaaattagccaagctacttaggaggctgaggt-gggaggatcacttgagcctgggaggtcaacgctgcagtgaactgtgatcgtgcc-actgtactctagcctgggccacagagcaagtctc--------------------aaaaaaaaaaaaaa i aotNan1.NW_018505377v1 I 11 C 0 e proCoq1.NW_012149263v1 612829 118 + 2501019 I e micMur3.chr22 3996764 51 - 30143674 I e dasNov3.JH563638 393181 4 + 643850 I e otoGar3.GL873654 5530214 4 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e canFam3.chr1 4656122 2 - 122678785 I e calJac3.chr22 28602300 1679 + 49145316 I a score=152.000000 s hg38.chr19_GL383574v1_alt 126765 2 + 155864 ca s panTro5.chr19 36194376 2 + 61309027 ca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938603 1 + 64411610 c- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6350320 2 - 8369475 ca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63947523 2 - 106955855 ca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30263183 2 + 53671032 aa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34717096 2 + 59248254 aa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4589469 2 - 13342542 aa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5513366 2 + 7714307 aa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29317339 2 + 50890351 aa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 949318 2 - 2385121 aa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2391603 2 + 4274983 aa i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5454598 2 + 8899380 aa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1660294 2 - 2680843 aa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 406705 2 - 4471408 aa i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4656124 2 - 122678785 CG i canFam3.chr1 I 2 C 0 e proCoq1.NW_012149263v1 612829 118 + 2501019 I e micMur3.chr22 3996764 51 - 30143674 I e dasNov3.JH563638 393181 4 + 643850 I e otoGar3.GL873654 5530214 4 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=57902.000000 s hg38.chr19_GL383574v1_alt 126767 7 + 155864 aaaaaAC s panTro5.chr19 36194378 7 + 61309027 aaaaaaC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938604 7 + 64411610 aaaaaaC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6350322 7 - 8369475 aaaaAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63947525 7 - 106955855 aaaaaaC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30263185 7 + 53671032 aaaaaGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34717098 7 + 59248254 aaaaaGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4589471 7 - 13342542 aaaaaGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5513368 7 + 7714307 aaaaaGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29317341 7 + 50890351 aaaaaGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 949320 7 - 2385121 aaaaaGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2391605 7 + 4274983 aaaaaGC i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5454600 6 + 8899380 a-GGAGC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1660296 7 - 2680843 aGGGAGC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 406707 7 - 4471408 aaGGAGC i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5530218 7 + 5549422 AAAGAGA i otoGar3.GL873654 I 4 C 0 s canFam3.chr1 4656126 7 - 122678785 AAACAGC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 393185 7 + 643850 AAAGATC i dasNov3.JH563638 I 4 C 0 e proCoq1.NW_012149263v1 612829 118 + 2501019 I e micMur3.chr22 3996764 51 - 30143674 I e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=1043964.000000 s hg38.chr19_GL383574v1_alt 126774 89 + 155864 TAGGGCCTGAGCCTTTGGCAGGCTGGCTTCTTGTCCTCAT----------AGAAGGCA-T--TCTGTCAGCTTCTGT------------------------GCC---TTGA------------------------------------------------------------TATTGCTTGCTCTGGAAG s panTro5.chr19 36194385 89 + 61309027 TAGGGCCTGAGCCTTTGGCAGGCTGGCTTCTTGTCCTCAT----------AGAAGGCA-T--TCTGTCAGCTTCTGT------------------------GCC---TTGA------------------------------------------------------------TATTGCTTGCTCTGGAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938611 89 + 64411610 TAGGGCCTGAGCCTTTGGCAGGCTGGCTTCTTGTCCTCAT----------AGAAGGCA-T--TCTGTCAGCTTCTGT------------------------GCC---TTGA------------------------------------------------------------TATTGCTTGCTCTGGAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6350329 89 - 8369475 TAGGGCCTGAGCCTTTGGCAGGCTGGCTTCTTGTCCTCAT----------AGAAGGCA-T--TCTGTCAGCTTCTGT------------------------TCC---TTGA------------------------------------------------------------TATTGCTTGCTCTGGAAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63947532 89 - 106955855 TAGGGCCTGAGCCTTTGGCAGGCTGGCTTTTTGTTCTCAT----------AGAAGGCA-T--TCTGTCAGCTTCTGT------------------------GCC---TTGA------------------------------------------------------------TATTGCTTGCTCTGGAAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30263192 89 + 53671032 TAGGGCCTGAGCCTTTGGCAGGCTAGCTTCTTGTCCTCAT----------AGAAGGCA-T--TCTGTCAGCTTCTAT------------------------GCC---TTGA------------------------------------------------------------TTTTGCTTGCTCTGGGAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34717105 89 + 59248254 TAGGGCCTGAGCCTTTGGCAGGCTAGCTTCTTGTCCTCAT----------AGAAGGCA-T--TCTGTCAGCTTCTAT------------------------GCC---TTGA------------------------------------------------------------TTTTGCTTGCTCTGGGAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4589478 89 - 13342542 TAGGGCCTGAGCCTTTGGCAGGCTAGCTTCTTGTCCTCAT----------AGAAGGCA-T--TCTGTCAGCTTCTAT------------------------GCC---TTGA------------------------------------------------------------TTTTGCTTGCTCTGGGAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5513375 89 + 7714307 TAGAGCCTGAGCCTTTGGCAGGCTAGCTTCTTGTCCTCAT----------AGAAGGCA-T--TCTGTCAGCTTCTGT------------------------GCC---TTGA------------------------------------------------------------TTTTGCTTGCTCTGGGAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29317348 89 + 50890351 TAGGGCCTGAGCCTTTGGCAGGCTAGCTTCTTGTCCTCAT----------AGAAGGCA-T--TCTGTCAGCTTCTGT------------------------GCC---TTGA------------------------------------------------------------TTTTGCTTGCTCTGGGAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 949327 89 - 2385121 TAGAGTCTGAGCCTTTGGCAGGCTAGCTTCTTGTCCTCAT----------AGAAGGCA-T--TCTGTCAGCTTCTGT------------------------GCC---TTGC------------------------------------------------------------TTTTGCTTGCTCTGGGAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2391612 89 + 4274983 TAGGGCCTGAGCCTTTGGCAGGCTAGCTTCTTGTCCTCAT----------AGAAGGCA-T--TCTGTCAGCTTCTGT------------------------GCC---TTGA------------------------------------------------------------TTTTGCTTGCTCTGGGAG i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5454606 149 + 8899380 TAGGGCTTGAGATGTTGGCAGGCTGGCTTCTTGTCCTCAT----------AGAAGGCA-T--TCTATCAGCTTCTGT------------------------GCC---TTGATCTTGCTTACTCTAGAAGTTAAGTTCCTTGGAAGGCATTCCGTCAGCTTCTGTGCCTTGATCTTGCTTTCTCTGGAAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1660303 89 - 2680843 TAGGGCTTGAGATGTTGGCAGGCTGGCTTCTTGTCCTCAC----------AGAAGGCA-T--TCCATCGGCTTCTGT------------------------GTC---TTGA------------------------------------------------------------TCTTGCTTTCTCTGGAAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 406714 89 - 4471408 TAGGGCTTGAGATGTTGGCAGACTGGCTTCTTGTCCTCAT----------AGAAGGCA-T--TCTATTAGCTTCTGT------------------------GCC---TTGA------------------------------------------------------------TCTTGCTTTCTCTGGAAG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3996815 87 - 30143674 TAGGGCCTGAGCACCTGGCAGGCTGGCTTCTAGTCCTC------------AGAAGGCCTT--TCTCTCAGC-TCTGT------------------------GCC---TTGA------------------------------------------------------------TCTTGCATGCTCTGGAAG i micMur3.chr22 I 51 I 162 s proCoq1.NW_012149263v1 612947 90 + 2501019 TAGGGCCTGAGCATCTGGCAGCCTGGCTTCTGGTCCTCAT----------AGAAGGCCTT--TCTCTCAGCTTCTAC------------------------GCC---TTGA------------------------------------------------------------TCTTGCATGCTCTGGAAG i proCoq1.NW_012149263v1 I 118 I 76 s otoGar3.GL873654 5530225 93 + 5549422 CAGAGCCTGAGCATCTGCCAGCCTGGCTTCTGGTCTTCAA----------ACAAGGCATT--TCTCTCAGCTTCTGT------------------------GCCTTGTTGA------------------------------------------------------------TCTTGCATACTCTGGAAG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4656133 115 - 122678785 TAGGGCCTGAGCATCTGACAGCCTGGCTTCTGGTCCTCAT----------AGAAACCA-TTCTCTCTCAGTCTTTTTTTTTTTTTTTTCCATTCTCTCTCAGTC---TTGA------------------------------------------------------------TCTTGCTTGCTCCGGAAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 393192 55 + 643850 TGGGACCCAAGTATCTGGCATTTGGGTTTCTGGTCCTCATGCTTGGTTTCAGAAG-------------------------------------------------------------------------------------------------------------------------------------- i dasNov3.JH563638 C 0 I 4 e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=621955.000000 s hg38.chr19_GL383574v1_alt 126863 74 + 155864 TCAATTTCCTTGGAAGCTGAGTAGTGCAAGGGT-AAGGAGGAAATGAGAAACATTTAGGATATaataat---aatagg s panTro5.chr19 36194474 74 + 61309027 ACAATTTCCTTGGAAGCTGAGTAGTGCAAGGGT-AAGGAGGAAATGAGAAACATTTAGGATATAATaat---aatagg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938700 74 + 64411610 TCAATTTCCTTGGAAGCTGAGTAGTGCAAGGGT-AAGGAGGAAATGAGAAACATTTAGGATATAATaat---aatagg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6350418 74 - 8369475 TCAATTTCCTTGGAAGCTGAGTAGTGCAAGGGT-AAGGAGGAAATGAGAAGCATTTAGGATATaataat---agtagg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63947621 75 - 106955855 TCAATTTCCTCGGAAGCTGAGTAGTGCAAGGGTAAAAGAGGGAATGAGAAACATTTAGGATGTAATaat---aatagg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30263281 78 + 53671032 TCAAGTTCCTTGAAAGCTGAGTAGTGCAAGGGTAAAGGAGGCGATGAGAAGCATTTAGGCTATAATAATAACAATAGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34717194 78 + 59248254 TCAAGTTCCTTGAAAGCTGAGTAGTGCAAGGGTAAAGGAGGCGATGAGAAGCATTTAGGCTATAATAATAACAATAGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4589567 78 - 13342542 TCAAGTTCCTTGAAAGCTGAGTAGTGCAAGGGTAAAGGAGGCGATGAGAAGCATTTAGGCTATAATAATAACAATAGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5513464 74 + 7714307 TCAAGTTCCTTGAAAGCTGAGTAGTGC-AGGGTAAAGGAGGCGATGAGAAGCATTTAGGCTATAATAAT---AATAGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29317437 78 + 50890351 TCAAGTTCCTTGAAAGCTGAGTAGTGCAAGGGTAAAGGAGGCGATGAGAAGCATTTAGGCTATAATAATAACAATAGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 949416 77 - 2385121 TCAAGTTCCTTGAAAGCTGAGTAGTGC-AGGGTAAAGGAGGCGATGAGAAGCATTTAGGCTATAATAATAACAATAGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2391701 78 + 4274983 TCAAGTTCCTTGAAAGCTGAGTAGTGCAAGCGTAAAGGAGGCGATGAGAAGCATTTAGGATGTAATAATaacaatagg i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5454755 70 + 8899380 TCAAGTTC--------TTGAGTAGTACAAGAGTAAAGGAGGGAATGAGAAGCATGTAGGATGTAGTAGTAACAAAAGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1660392 69 - 2680843 TCAAGTTC--------TTG-GTAGTACAAGAGTAAAGGAGGGAATGAGAAGCATGTAGGATGTAATAGTaacaacagg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 406803 70 - 4471408 TCAAGTTC--------TTGAGTAGTACAAGAGTAAAGGAGGGAATGAGAAGCATGTAGGATGTAATAGTAACAAAAGG i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5530318 71 + 5549422 GCCAGTAGCTTGGAAGCTGAACAGTGAAAGTATAAAGGAGGGAATGAGAGG--TTCAGGAGGTAACAGT---AATG-- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4656248 72 - 122678785 GCTAGTTCCTGGGAAGCTGAACACTGGGGGTATAAAGGAGAAAATGAGAGGCATCTAGAGTGTAACAGTAGC------ i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 393251 77 + 643850 TCTAGTTCCTCAGAGGCTGAATAGTGTTAGGATAGGGGTTGGAATGAAGAACATTTGGGATGTTACA-TAATGATAGC i dasNov3.JH563638 I 4 C 0 e proCoq1.NW_012149263v1 613037 76 + 2501019 I e micMur3.chr22 3996902 162 - 30143674 I e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=843623.000000 s hg38.chr19_GL383574v1_alt 126937 77 + 155864 taacatttatggagcagttgctgtagaagaggcactgtggtgaacAGGATTGACAGGATTGAAAGGAC-AGGCTAGAC--------- s panTro5.chr19 36194548 77 + 61309027 taacatttatggagccattgctatagaagaggcactgtGGTGAACAGGATTGACAGGATTGAAAGGAC-AGGCTAGAC--------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938774 77 + 64411610 taacatttatggagccgttgctatagaagaggcactgtGGTGAACAGGATTGACAGGATTGAAAGGAC-AGGCTAGAC--------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6350492 77 - 8369475 taacatttatggagcggttgctatagaagaggcactgtggtgaacAGGATTGACAGGATTGAAAGGAC-AGGCTAGAC--------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63947696 77 - 106955855 taacatttatggagcagttgctatagaagaggcactgtGGTGAATGGGATTGGCAGGATTGAAAGGAC-AGGCTAGAC--------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30263359 76 + 53671032 TAACATTTATGGAGCAGTTGCTATAGAACTGGCACTATGGTGAACAGGATT-GCAGGATTGAAAGGAC-AGGCTAGTC--------- i rheMac8.chr19 C 0 I 4 s macFas5.chr19 34717272 76 + 59248254 TAACATTTATGGAGCAGTTGCTATAGAACTGGCACTATGGTGAACAGGATT-GCAGGATTGAAAGGAC-AGGCTAGTC--------- i macFas5.chr19 C 0 I 4 s macNem1.NW_012011689v1 4589645 76 - 13342542 TAACATTTATGGAGCAGTTGCTATAGAACTGGCACTATGGTGAACAGGATT-GCAGGATTGAAAGGAC-AGGCTAGTC--------- i macNem1.NW_012011689v1 C 0 I 4 s cerAty1.NW_012005268v1 5513538 77 + 7714307 TAACATTTATGGAGCAGTTGCTGTAGAACTGGCACTGTGGTGAACAGGATTGGCAGGATTGAAAGGAC-AGGCTAGTC--------- i cerAty1.NW_012005268v1 C 0 I 4 s chlSab2.chr6 29317515 77 + 50890351 TAACATTTATGGAGCAGTTGCTATAGAACTGGCACTATGGTGAACAGGATTGGCAGGATTGAAAGGAC-AGGCTAGTC--------- i chlSab2.chr6 C 0 I 4 s manLeu1.NW_012102454v1 949493 77 - 2385121 TAACATTTATGGAGCAGTTGCTGTAGAACTGGCACTATAGTGAACAGGATTGGCAGGATTGAAAGGAC-AGGCTAGTC--------- i manLeu1.NW_012102454v1 C 0 I 4 s colAng1.NW_012111697v1 2391779 77 + 4274983 taacatttatggagcagttgctatagaactggcactatGGTGAACAGGATTGGCAGGATTGAAAGGAC-AGGCTAGTC--------- i colAng1.NW_012111697v1 C 0 I 4 s saiBol1.JH378197 5454825 77 + 8899380 TAATATTTATGGAGCAGTTGCTATAGAACAGGCACTGTGGGGAACAGGATTGACAGGATTGAAAGGAC-ACGCTAGAC--------- i saiBol1.JH378197 C 0 I 9 s cebCap1.NW_016107633v1 1660461 77 - 2680843 taatatttatggagcagttgctatagaacaggcactgtGGTGAACAGGATTGACAGGATTGAAAGGAC-AGGCTAGAC--------- i cebCap1.NW_016107633v1 C 0 I 9 s aotNan1.NW_018505377v1 406873 77 - 4471408 TAATATTTATGGAGCAGTTGCTACAGAACAGGCACTGTGGTGAACAGGATTGACAGGATTGAAAGGAC-AGGCTAGAC--------- i aotNan1.NW_018505377v1 C 0 I 9 s proCoq1.NW_012149263v1 613113 76 + 2501019 TAACACTTACGGAGCAGTTGCTGCAGAACAGACACTTTAGTAAACAAGATT-GCAGGATTGAAAGCAC-AGGGTGGAC--------- i proCoq1.NW_012149263v1 I 76 I 9 s otoGar3.GL873654 5530389 66 + 5549422 --------ATGGC----TGGCTGTAGAGCAGACACTGTGGTAAACAAGATTGGCAGGATTGAAAGTATAAGGGTGGAA--------- i otoGar3.GL873654 C 0 I 9 s canFam3.chr1 4656320 63 - 122678785 TCACATTCATGGAGCAGTTGCTGTAGACCAG--------GTGAGCAGAATT-AAAGGATAGAAAGCCA-AAGA-------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 393328 85 + 643850 AAACAATTCTGGAA-AGTTGCTTTAGTCCAGGCACTGTGGTAAACGAGATTGTTGGGATTGAATGTAT-AGGGTAAAAAGGTGAGGT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3996902 162 - 30143674 I e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=1325096.000000 s hg38.chr19_GL383574v1_alt 127014 113 + 155864 AACAGGAC----GGGGACCATCTGGAATAACACCTTAAGTTTGGGTTAAAAGTTGGTTGTGCCTTTGACCAAGCAAGGCAGTAAATATAGCAGGAGGAGTGGGAAATAGAAAGGTGA s panTro5.chr19 36194625 113 + 61309027 AACAGGAC----AGGGACCATCTGGAATAACACCTTAAGTTTAGGTTAAAAGTTGGTTGTGCCTTTGACCAAGCAAGGCAGTAAATATAGCAGGAGGAGTGGGAAATGGAAAGGTGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938851 113 + 64411610 AACAGGAC----AGGGACCATCTGGAATAACACCTTAAGTTTAGGTTAAAAGTTGGTTGTGCCTTTGACCAAGCAAGGCAGTAAATATAGCAGGAGGAGTGGGAAATGGAAAGGTGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6350569 113 - 8369475 AACGGGAC----AGGGACCATCTGGAATAACCCCTTAAGTTTAGGTTAAAAGTTGGTTGTGCCTTTGACCAAGCAAGGCAGTAAATATAGCAGGAGGAGTGGGAAATGGAAAGGTGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63947773 113 - 106955855 AACAGGAC----AGGGACCATCTGGAATAACACCTTAAGTTTAGGTTAAAAGTTGATTGTGCCTTTGACCAAGCAAGGCAGTAAATATAGCAGGAGGAGTGGGAAATGGAAAGGTGA i nomLeu3.chr10 C 0 I 316 s rheMac8.chr19 30263439 99 + 53671032 AACAGGAC----AGGGACCATCTG--------------GTTTAGGTTAAAAGTTGGTTGTGCCTTTGACCAAGCAAGGCAGTAAATGTAGCAGGAGGAGTGGGAAATGGAAAGGTGA i rheMac8.chr19 I 4 C 0 s macFas5.chr19 34717352 99 + 59248254 AACAGGAC----AGGGACCATCTG--------------GTTTAGGTTAAAAGTTGGTTGTGCCTTTGACCAAGCAAGGCAGTAAATGTAGCAGGAGGAGTGGGAAATGGAAAGGTGA i macFas5.chr19 I 4 C 0 s macNem1.NW_012011689v1 4589725 99 - 13342542 AACAGGAC----AGGGACCATCTG--------------GTTTAGGTTAAAAGTTGGTTGTGTATTTGACCAAGCAAGGCAGTAAATGTAGCAGGAGGAGTGGGAAATGGAAAGGTGA i macNem1.NW_012011689v1 I 4 C 0 s cerAty1.NW_012005268v1 5513619 99 + 7714307 AACAGGAC----AGGGACCATCTG--------------GTTTAGGTTAAAAGTTGGTTGTGCCTTTGACCAAGCAAGGCAGTAAATGTAGCAGGAGGAGTGGGAAATGGAAAGGTGA i cerAty1.NW_012005268v1 I 4 C 0 s chlSab2.chr6 29317596 99 + 50890351 AACAGGAC----AGGGACCATCTG--------------GTTTAGGTTAAAAGTTGGTTGTGCCTTTGACCAAGCAAGGCAGTAAATGTAGCAGGAGGAGTGGGAAATGGAAAGGTGA i chlSab2.chr6 I 4 C 0 s manLeu1.NW_012102454v1 949574 99 - 2385121 AACAGGAC----AGGGACCCTCTG--------------GTTTAGGTTAAAAGTTGGTTGTGCCTTTGACCAAGCAAGGCAGTAAATGTAGCAGGAGGAGTGGGAAATGGAAAGGTGA i manLeu1.NW_012102454v1 I 4 I 474 s colAng1.NW_012111697v1 2391860 99 + 4274983 AACAGGAC----AGGGACCATCTG--------------GTTTAGGTTAAAAGTTGGTTGTGCCTTTCACCAAGCAAGGCAGTAAATGTAGCAGGAGGAGTGGGAAATGGAAAGGTGA i colAng1.NW_012111697v1 I 4 C 0 s saiBol1.JH378197 5454911 112 + 8899380 AACAGGAC----AGGGACCATCTGGGA-AACACCCTAAGTTTAGGTTAAAAGTTAGTAGTACCTTTGACCAAGCAAGGCAGTAAATACAGCAGGAGAAGTGGGAAATGGAAAGATGA i saiBol1.JH378197 I 9 C 0 s cebCap1.NW_016107633v1 1660547 107 - 2680843 AACAGGACCCTAAGGGAT----------AACACCCTAAATTTAGGTTAAAAGTTGGTAGTACCTTTGACCAAGCAAGGCAGTAAATACAGCAGGAGAAGTGGGAAATGGAAAGGTGA i cebCap1.NW_016107633v1 I 9 C 0 s aotNan1.NW_018505377v1 406959 113 - 4471408 AACAGGAC----AGGGACCATCTGGGATAACACCCTAAGTTTAGGTTAAAAGTTGGTAGTGCCTTTGACCAAGCAAGGCAGTAAATACAGCAGGAGAAGTGGGAAATGGAAAGGTGA i aotNan1.NW_018505377v1 I 9 C 0 s micMur3.chr22 3997064 113 - 30143674 AACAGGAC----AGGGACCATCTAGGGTAACACCTTAGGTTTAGGCTAAAGGTCGGCAATGTCTTAAACCAAGCAAGGCAGTAAATACAGCAGGGGGAGCAGGGAATAGAAGGGTGA i micMur3.chr22 I 162 C 0 s proCoq1.NW_012149263v1 613198 113 + 2501019 AACAGGAC----AGGGACCATGTAGGATAACACCTGAGGCTTAGGCTAAGGGTTGGCAAGGCCTTAAACCCAGCAAGGCAGTAAATACAGCAGGGGGAGCAAGGAATAGAAGGGTGA i proCoq1.NW_012149263v1 I 9 C 0 s otoGar3.GL873654 5530464 110 + 5549422 AAGAGATT----AGGGACCATGTAGGATAACAACCTTTGTTTAGGCTAAGGAT-GGTAGTGCCTTTAGCCAAGCAAGGCAGT-AATAAAGCAGGAGGAGCAGGACATAGAA-GGTGA i otoGar3.GL873654 I 9 C 0 s canFam3.chr1 4656383 98 - 122678785 AACAAGAC----CAGGGCC-TCTGGGT---CATTTTAGGTTTAGGCT-----CTGG--GTGCCTTTAGCCA--CAA--CAGTAAGTACAGTAGAAGGAGCAGAAAATGGAAGGGTGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 393413 100 + 643850 AACAAGAC----AGGGACCATTTGGGATGCCACCTTAGGTTTAGGCTCA---------GTGCCTTTAAC----CAAGGCAGTAAATGCAGCAGGAGGAGCAGGGAATGGAAGGGTGA i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=4909.000000 s hg38.chr19_GL383574v1_alt 127127 1 + 155864 C s panTro5.chr19 36194738 1 + 61309027 C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938964 1 + 64411610 C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6350682 1 - 8369475 C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63948202 1 - 106955855 c i nomLeu3.chr10 I 316 C 0 s saiBol1.JH378197 5455023 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1660654 1 - 2680843 T i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 407072 1 - 4471408 C i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3997177 1 - 30143674 C i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 613311 1 + 2501019 C i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5530574 1 + 5549422 C i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4656481 1 - 122678785 C i canFam3.chr1 C 0 I 4 s dasNov3.JH563638 393513 1 + 643850 C i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111140965 731 - 145441459 I e chlSab2.chr6 29317695 0 + 50890351 C e calJac3.chr22 28602300 1679 + 49145316 I e colAng1.NW_012111697v1 2391959 0 + 4274983 C e manLeu1.NW_012102454v1 949673 474 - 2385121 I e cerAty1.NW_012005268v1 5513718 0 + 7714307 C e macNem1.NW_012011689v1 4589824 0 - 13342542 C e macFas5.chr19 34717451 0 + 59248254 C e rheMac8.chr19 30263538 0 + 53671032 C a score=73961.000000 s hg38.chr19_GL383574v1_alt 127128 9 + 155864 AGGGTAAAA s panTro5.chr19 36194739 9 + 61309027 AGGGTAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938965 9 + 64411610 AGGGTAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6350683 9 - 8369475 AGGGTAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63948203 9 - 106955855 AGGGTAAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30263538 8 + 53671032 -TGGTAAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34717451 8 + 59248254 -TGGTAAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4589824 8 - 13342542 -TGGTAAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5513718 8 + 7714307 -TGGTAAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29317695 8 + 50890351 -TGGTAAAA i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2391959 8 + 4274983 -CGGTAAAA i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5455024 9 + 8899380 AGAGTAAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1660655 9 - 2680843 AGAGTAAAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 407073 9 - 4471408 AGAATAAAA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3997178 9 - 30143674 AAGGTAAAA i micMur3.chr22 C 0 I 285 s proCoq1.NW_012149263v1 613312 9 + 2501019 AAGGTGAAA i proCoq1.NW_012149263v1 C 0 I 297 s otoGar3.GL873654 5530575 9 + 5549422 AAGGTAGAG i otoGar3.GL873654 C 0 I 5 e dasNov3.JH563638 393514 0 + 643850 C e mm10.chr7 111140965 731 - 145441459 I e canFam3.chr1 4656482 4 - 122678785 I e calJac3.chr22 28602300 1679 + 49145316 I e manLeu1.NW_012102454v1 949673 474 - 2385121 I a score=314032.000000 s hg38.chr19_GL383574v1_alt 127137 50 + 155864 C-ttttttt-----------gaaacatag-tcttgctctgttgcc-------caggctggagtgcagtga s panTro5.chr19 36194748 50 + 61309027 C-ttttttt-----------gaaacatag-tcttgctctgttgcc-------caggctggagtgcagtga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39938974 50 + 64411610 C-ttttttt-----------gaaacatag-tcttgctctgttgcc-------caggctggagtgcagtga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6350692 50 - 8369475 C-ttttttt-----------gaaacatag-tcttgctctgttgcc-------caggctggagtgcagtga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63948212 50 - 106955855 C-ttttttt-----------gaaacatag-tcttgctctgttccc-------caggctggagtgcagtga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30263546 57 + 53671032 C-tttttttttt----tttggaaacatag-tcttgctctgttgcc-------caggctggagtgcagtga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34717459 58 + 59248254 Cttttttttttt----tttggaaacatag-tcttgctctgttgcc-------caggctggagtgcagtga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4589832 58 - 13342542 Cttttttttttt----tttggaaacatag-tcttgctctgttgcc-------caggctggagtgcagtga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5513726 56 + 7714307 Cttttttttttt----tt--gaaacatag-tcttgctctgttgcc-------caggctggagtgcagtga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29317703 57 + 50890351 C-tttttttttt----tttggaaacatag-tcttgctctgttgcc-------caggctggagtgcagtga i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2391967 57 + 4274983 C-tttttttttt----ttttgaaacatag-tcttgctctgttgcc-------caggctggagtgcagtga i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5455033 56 + 8899380 C-tttttttttt----tcttgaaacatag-tcttgcactgttacc-------catgatgatgtgcagtg- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1660664 54 - 2680843 C-tttttttttt------ttgaaacatag-tcttgctctgttact-------catgatgatgtgcagtg- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 407082 57 - 4471408 C-ttttttttttt---ttttgaaacgtag-tcttgctctgttacc-------catgatgatgtgcagtg- i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5530589 58 + 5549422 ------------CAAGCTTGAGGACATGGCTCATGGTCTACTCCCTGGGTGACAAGGTAGAGTGTGATGA i otoGar3.GL873654 I 5 I 3037 e proCoq1.NW_012149263v1 613321 297 + 2501019 I e micMur3.chr22 3997187 285 - 30143674 I e dasNov3.JH563638 393514 0 + 643850 C e mm10.chr7 111140965 731 - 145441459 I e canFam3.chr1 4656482 4 - 122678785 I e calJac3.chr22 28602300 1679 + 49145316 I e manLeu1.NW_012102454v1 949673 474 - 2385121 I a score=371863.000000 s hg38.chr19_GL383574v1_alt 127187 46 + 155864 tgcaatcttggctcactgcaacatctgcctcctgggttcaagtgat s panTro5.chr19 36194798 46 + 61309027 tgcaatcttggctcactgcaacctctgcctcctgggttcaagtgat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39939024 46 + 64411610 tgcaatcttggctcactgcaacctctgcctcctgggttcaagtgat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6350742 46 - 8369475 tgcaatcttggctcactgcaacctctgcctcctgggttcaagtgat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63948262 46 - 106955855 tgcagtcttggctcactgcaacctctgcctcctgggttcaagtgat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30263603 46 + 53671032 tgcaatcttggctcactgcaacctctgcctcctgggttcaagtgat i rheMac8.chr19 C 0 I 13 s macFas5.chr19 34717517 46 + 59248254 tgcaatcttggctcactgcaacctctgcctcctgggttcaagtgat i macFas5.chr19 C 0 I 13 s macNem1.NW_012011689v1 4589890 46 - 13342542 tgcaatcttggctcactgcaacctctgcctcctgggttcaagtgat i macNem1.NW_012011689v1 C 0 I 13 s cerAty1.NW_012005268v1 5513782 46 + 7714307 tgcaatcttggctcactgcaacctctgcctcctgggttcaagtgat i cerAty1.NW_012005268v1 C 0 I 15 s chlSab2.chr6 29317760 46 + 50890351 tgcaatcttggctcactgcaacctctgcctcctgggttcaagtgat i chlSab2.chr6 C 0 I 15 s colAng1.NW_012111697v1 2392024 46 + 4274983 tgcaatcttggctcactgcaacctctgcctcctgggttcaagtgat i colAng1.NW_012111697v1 C 0 I 15 s saiBol1.JH378197 5455089 46 + 8899380 tgcattcttggctcactgcaacctttgcctcctgggttcaactgat i saiBol1.JH378197 C 0 I 15 s cebCap1.NW_016107633v1 1660718 46 - 2680843 tgcagtcttagctcactgcaacctttgcctcctgggttcaaccaat i cebCap1.NW_016107633v1 C 0 I 15 s aotNan1.NW_018505377v1 407139 46 - 4471408 tgcagtcttggctcactgcaacctttgcctcctggtttcaactgat i aotNan1.NW_018505377v1 C 0 I 15 e proCoq1.NW_012149263v1 613321 297 + 2501019 I e micMur3.chr22 3997187 285 - 30143674 I e dasNov3.JH563638 393514 0 + 643850 C e otoGar3.GL873654 5530647 3037 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e canFam3.chr1 4656482 4 - 122678785 I e calJac3.chr22 28602300 1679 + 49145316 I e manLeu1.NW_012102454v1 949673 474 - 2385121 I a score=1383109.000000 s hg38.chr19_GL383574v1_alt 127233 179 + 155864 tcccagatagctgggatcacaggcgcccaccacca------tgcccggctaatttttgtatttttagtagagacagggttttgccatgttggtcaggctggtctcaaactcctgacctcaggtaatccacccaccttggcctcccaaagtgctgggattacaggcgtgagctaccgtgccctggc s panTro5.chr19 36194844 179 + 61309027 tcccagatagctgggattacaggcgcccaccacca------tacccggctaatttttgtatttttagtagagacggggttttgccatgttggtcaggctggtctcaaactcctgacctcaggtaatccacccaccttggcctcccaaagtgctgggattacaggcgtgagctaccgtgccctggc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39939070 179 + 64411610 tcccagatagctgggattacaggcgcccaccacca------tacccggctaatttttgtatttttagtagagacagggttttgccatgttggtcaggctggtctcaaactcctgacctcaggtaatccacccaccttggcctcccaaagtgctgggattacaggcgtgagctaccgtgccctggc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6350788 179 - 8369475 tcccagatagctgggattacaggcgcccaccacca------tgcccggctaatttttgtatttttagtagagacagggttttgccatgttggtcaggctggtctcaaactcctgacctcaggtaatccacccaccttggcctcccaaagtgctgggattacaggcgtgagctaccgtgccctggc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63948308 178 - 106955855 tcccaagtagctgggattacaggcacccacgacca------tgcctggctaatttttgtatttttggtagagacagggttttgccatgttggtcaggctggtctgaaactcctgacctcaggtaatccacccacctcggcctcccaaagtgctgggattacaggcgtgagctgctgtg-cctggc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30263662 169 + 53671032 tcccaggtagctcggattataggcgcccgcaacca------tgcctgactaatttttgtatttttagtagagacagggtt--------ttggtcaggct-gtctcaaactcctgacctcaggtgatccacccacctcagctttccaaagtgctgggattacaggcgtgagcccccatg-cctggc i rheMac8.chr19 I 13 C 0 s macFas5.chr19 34717576 169 + 59248254 tcccaggtagctcggattacaggcgcccgcaacca------tgcctgactaatttttgtatttttagtagagacagggtt--------ttggtcaggct-gtctcaaactcctgacctcaggtgatccacccacctcagctttccaaagtgctgggattacaggcgtgagcccccatg-cctggc i macFas5.chr19 I 13 C 0 s macNem1.NW_012011689v1 4589949 169 - 13342542 tcccaggtagctcggattacaggcgcccgccacca------tgcctgactaatttttgtatttttagtagagacagggtt--------ttggtcaggct-gtctcaaactcctgacctcaggtgatccacccacctcagctttccaaagtgctgggattacaggcgtgagcccccatg-cctggc i macNem1.NW_012011689v1 I 13 C 0 s cerAty1.NW_012005268v1 5513843 169 + 7714307 tcccaggtagctcagattacaggcgcccgccacca------tgcctgactaatttttgtatttttagtagagacagggtt--------ttggtcaggct-gtctcaaactcctgacctcaggtgatccacccacctcggctttccaaagtgctgggattacaggcgtgagcccccacg-cctggc i cerAty1.NW_012005268v1 I 15 C 0 s chlSab2.chr6 29317821 169 + 50890351 tcccaggtagctcggattacaggcgcccgccacca------tgcctgactaatttttgtattttcagtagagatggggtt--------ttggtcaggct-gtctcaaactcctgacctcaggtgatccacccacctcggctttccaaagtgctgggattacaggcatgagcccccacg-cctggc i chlSab2.chr6 I 15 C 0 s manLeu1.NW_012102454v1 950147 169 - 2385121 tcccaggtagctcagattacaggcgcccgccacca------tgcctgactaatttttgtatttttagtagagacagggtt--------ttggtcaggct-gtctcaaactcctgacctcaggtgatccacccaccttggctttccaaagtgctgggattacaggcgtgagcccccacg-cctggc i manLeu1.NW_012102454v1 I 474 C 0 s colAng1.NW_012111697v1 2392085 165 + 4274983 tcccaggtagctcggattacaggcgcccgccacca------tgc----ctaatttttgtatttttagtagagacagggtt--------ttagtcaggct-gtctcaaactcctgacctcaggtgatccacccatcttggctttccaaagtgctgggattacaggcgtgagcccccatg-actggc i colAng1.NW_012111697v1 I 15 C 0 s saiBol1.JH378197 5455150 183 + 8899380 tcccaagtagctggaattacaggtgcctgccaccatgaccgtgtccagctaattcttgtatttttagtagagatgggttt-tgccatgttggcgaggctggtcttgaattcctgacctcaggtgatctacccaccttggcctcccaaactgctgggattccaagggtgagccaccatg-cctggc i saiBol1.JH378197 I 15 C 0 s cebCap1.NW_016107633v1 1660779 177 - 2680843 tcccaagtagctggaattacaggtgcctgccacca------tgtctggctaatttttgtatttttagtagagatgggttt-tgccatgttggccaggctggtcttgaactcctgaccttaggtgatctacccaccttggcctcccaaagtgccgggattacaaaggtgagccaccatg-cctggc i cebCap1.NW_016107633v1 I 15 C 0 s aotNan1.NW_018505377v1 407200 177 - 4471408 tcccaagtagctggaattacaggtgcctgccatca------tgcccggctaatttttgtatttttagtagagatgggttt-tgccatgttggccaggctggtcttgaactcctgacctcaggtgatctacccaccttggcctcctaaagtgctgggattatgagggtgagccaccatg-cctggc i aotNan1.NW_018505377v1 I 15 C 0 e proCoq1.NW_012149263v1 613321 297 + 2501019 I e micMur3.chr22 3997187 285 - 30143674 I e dasNov3.JH563638 393514 0 + 643850 C e otoGar3.GL873654 5530647 3037 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e canFam3.chr1 4656482 4 - 122678785 I e calJac3.chr22 28602300 1679 + 49145316 I a score=64740.000000 s hg38.chr19_GL383574v1_alt 127412 10 + 155864 cATGAAAGGG s panTro5.chr19 36195023 10 + 61309027 cGTGAAAGGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39939249 10 + 64411610 cGTGAAAGGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6350967 10 - 8369475 cGTGAAAGGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63948486 10 - 106955855 TGTGAAAGGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30263831 10 + 53671032 cGTGAAGAGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34717745 10 + 59248254 cGTGAAGAGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4590118 10 - 13342542 cGTGAAGAGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5514012 10 + 7714307 cGTGAAGAGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29317990 10 + 50890351 cGTGAAGAGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 950316 10 - 2385121 cGTGAAGAGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2392250 10 + 4274983 cGTGAAAACG i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5455333 10 + 8899380 TGTGATAGGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1660956 10 - 2680843 cGTGATAGGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 407377 10 - 4471408 TGTGATAGGG i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 393514 4 + 643850 CATG------ i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 613321 297 + 2501019 I e micMur3.chr22 3997187 285 - 30143674 I e otoGar3.GL873654 5530647 3037 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e canFam3.chr1 4656482 4 - 122678785 I e calJac3.chr22 28602300 1679 + 49145316 I a score=3072141.000000 s hg38.chr19_GL383574v1_alt 127422 302 + 155864 TAAAACTTGAAGACCCTGCAGAGATGTCTCCTgggtctggtccttggagagggaggtcttgactggagagttgaatttgggaatcatcagcaGT-GATACGGAGTATGATCTCCTAGAGAGAGGTC----------ACTTTTCATTGCTCCAGCTCAGCTTCTCATCAGTTCCAAGAAGCTGGAAGCCTT-AA-CCATCTT----CTAGGAGTGGTAAGCAGAGTGCCATGGTCTGGA--TATTTGACAGAGGTGGGATGGTGCAAGAATGGAGAGCTCAACCTGTGGCAGCAGATTGCCATGTCCCAGACCTAGCTGTGT s panTro5.chr19 36195033 302 + 61309027 TAAAACTTGAAGACCCTGCGGAGATGTCTCCTgggtctggtccttggagagggaggtcttgactggagagttgaatttgggaatcatcagcaGT-GATATGGAGTATGATCTCCTAGAGAGAGGTC----------ACTTTTCATTGCTCCAGCTCAGCTTCTCATCAGTTCCAAGAAGCTGGCAGCCTT-AA-CCATCTC----CTAGGAGTGGTAAGCAGAGTGCCATGGTCTGGA--TATTTGACagaggtgggatggtgcaagaatggagagctcagcctctggcagcagattgccatgtcccagacctagctgtgt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39939259 302 + 64411610 TAAAACTTGAAGACCCTGCGGAGATGTCTCCTgggtctggtccttggagagggaggtcttgactggagagttgaatttgggaatcatcagcaGT-GATATGGAGTATGATCTCCTAGAGAGAGGTC----------ACTTTTCATTGCTCCAGCTCAGCTTCTCATCAGTTCCAAGAAGCTGGCAGCCTT-AA-CCATCTC----CTAGGAGTGGTAAGCAGAGTGCCATGGTCTGGA--TATTTGACAGAGGTGGGATGGTGCAAGAATGGAGAGCTCAGCCTCTGGCAGCAGATTGCCATGTCCCAGACCTAGCTGTGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6350977 302 - 8369475 TAAAACTTGAAGACCCTGCGGAGATGTCTCCTgggtctggtccttggagagggagggcttgactggagagttgaatttgggaatcatcagAAGT-GATATGGAGTGTGATCTCCTAGAGAGAGGTC----------ACTTTTCATTGCTCCAGCTCAGCTTCTCATCAGTTCCAAGAAGCTAGCAGCCTT-AA-CCATCTC----CTAGGAGTGGTAAGCAGAGTGCCATGGTCTGGA--TATTTGACagaggtgggatggtgcaagaatggagagctcaacctctggcagcagattgccatgtcccagacctagctgtgc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63948496 301 - 106955855 TAAAACTTGAAGACCCTGCGGAGATGTCTCCTgggtctggtccttggagagggaggtcttgagtggagagttgaatttgggaatcatcagcaGT-GATATGGAGTGTGATCTCCTAGAGAGA-GTC----------ACTTTTCATGGCTCCAACTCAGCTTCTCGTCAGTTCCAAGAAGCTGACAGCCTT-AA-CCATCTC----CTAAGAGTGGTAAACAGAGTGCCATGGTCTGGA--TATTTGACagaggtgggatggtgcaagaatggagagctcaacctctggcagcagattgccacgtcccagacctagctgtgt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30263841 302 + 53671032 TAAAACTTGAAGACCCTGCGGAGATGCCTCatgggtctggtccttggagagggaggtcttgactggagagttgaatttgggaatcgtcagcaGT-GATATGGAGCATGATCTCCTTGAGAGAAGTC----------ACTTTTCATTGCTCCAGCTTAACTTCGCCTCAGTTCCAAGAAGCTGACAGCCTT-AA-CCATCTC----CTAAGAGTGGTAAACAGAGTGCCGTGGTCTGGA--TATTTGACAGAGGTGGGATGGTGCGAGGATGGAGAGCTCAATCTCTCGCAGCAGATTGCCATGTCCCAGACCTAGCTGTGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34717755 302 + 59248254 TAAAACCTGAAGACCCTGCGGAGATGCCTCatgggtctggtccttggagagggaggtcttgactggagagttgaatttgggaatcgtcagcaGT-GATATGGAGCATGATCTCCTTGAGAGAAGTC----------ACTTTTCATTGCTCCAGCTTAACTTCGCCTCAGTTCCAAGAAGCTGACAGCCTT-AA-CCATCTC----CTAAGAGTGGTAAACAGAGTGCCGTGGTCTGGA--TATTTGACagaggtgggatggtgcgaggatggagagctcaatctctcgcagcagattgccatgtcccagacctagctgtgt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4590128 302 - 13342542 TAAAACTTGAAGACCCTGCGGAGATGCCTCatgggtctggtccttggagagggaggtcttgactggagagttgaatttgggaatcgtcagcaGT-GATATGGAGCATGATCTCCTTGAGAGAAGTC----------ACTTTTCATTGCTCCAGCTTAACTTCGCCTCAGTTCCAAGAAGCTGACAGCCTT-AA-CCATCTC----CTAAGAGTGGTAAACAGAGTGCCGTGGTCTGGA--TATTTGACAGAGGTGGGATGGTGCGAGGATGGAGAGCTCAATCTCTCGCAGCAGATTGCCATGTCCCAGACCTAGCTGTGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5514022 302 + 7714307 TAAAACTTGAAGACCCTGTGGAGATGCCTCatgggtctggtccttggagagggaggtcttgactggagagttgaatttgggaatcgtcagcaGT-GATATGGAGCATGATCTCCTTGAGAGAAGTC----------ACTTTCCATTGCTCCAGCTTAACTTCGCCTCAGTTCCAAGAAGCTGACAGTCTT-AG-CCATCTC----CTAAGAGTGGTAAACAGAGTGCCGTGGTCTGGA--TATTTGACAGAGGTGGGATGGTGCGAGGATGGAGAGCTCAATCTCTGGCAGCAGATTGCCATGTCCCAGACCTAGCTGTGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29318000 302 + 50890351 TAAAACTTGAAGACCCTGCGGAGATGCCTCatgggtctggtccttggacagggaggtcttgactggagagttgaatttgggaatcgtcagcaGT-GATATGGAGCATGATCTCCTTGAGAGAAGTC----------ACTTTTCATTGCTCCAGCTTAACTTCGCCTCAGTTCCAAGAAGCTGACAGCCTT-AA-CCATCTC----CTAAGAGTGGTAAACAGAGTGCCGTGGTCTGGA--TATTTGACagaggtgggatggtgcaaggatgaagagctcaatctctggcagcagattgccatgtcccagacctagctgtgt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 950326 302 - 2385121 TAAAACTTGAAGACCCTGTGGAGATGCCTCatgggtctggtccttggagagggaggtcttgactggagagttgaatttgggaatcgtcagcaGT-GATATGGAGCATGATCTCCTTGAGAGAAGTC----------ACTTTCCATTGCTCCAGCTTAACTTCGCCTCAGTTCCAAGAAGCTGACAGTCTT-AA-CCATCTC----CTAAGAGTGGTAAACAGAGTGCCGTGGTCTGGA--TATTTGACAGAGGTGGGATGGTGCGAGGATGGAGAGCTCAATCTCTGGCAGCAGATTGCCATGTCCCAGACCTAGCTGTGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2392260 302 + 4274983 TAAAACTTGAAGACCCTGCAGAGATGCCTCCTgggtctggtccttggagagggaggtcttgactggagagttgaatttgggaatcatcagcaGT-GATATGGAGCATGATCTCCTTGAGAGAAGTC----------ACTTTTCATTGCTCCAGCTTAACTTCGCCTCAGTTCCGAGAAGCTGACAGCCTT-AA-CCATCTC----CTAAGAGTGGTAAACAGAGTGCCATGGTCTGGA--TATTTGACagaggtgggatggtgcaaggatggagagctcagcttctggcagcagattgccacgtcccagacctagctgtgt i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5455343 306 + 8899380 TAAAACTTGAAGAGCCTGCAGAGATGTCTCatggatctggtccttagaaaggaagatcttgactggagagttgaatttgggaatcatcagcaGT-GATATGGGGTATGATCTCTTAGAGAGAGGTC-----ACTTTACTTTTCATTGCTCTACCTCAACTTCCCATCAGTTCCAAGAAGCTGACAGCCTT-AA-CCATCTC----CTAAGAGTGGTAAATGGAATGCCATGGTCTGGA--TATTTGACAGAGGTGGGGTGGTGCAAGGATGGAGAGCTCGGCCTCTGG-AGGGGGTTGCCATGTCCCAGACCCTGCTGTGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1660966 303 - 2680843 TAAAACTTGAAGAGCCTGCAGAGATGTCTCatggatctggtcctt----aggaagatcttgactggagagttgaatttggaaatcatcagcaGT-GATGTGGGGTATGATCTCTTGGAGAGAGGTC-----ACTTTACTTTTCATTGCTCTACCTCAACTTCCCATCAGTTCCAAGAAGCTGACAGCCTT-AA-CCATCTC----CTAAGAGTGGTAAATGGAATGCCATGGTCTGGA--TATTTGACAGAGGTGGGATGGTGCAAGGTTGGAGAGCTCAGCCTCTGGCAGGAGGTTGCCATGTCCCAGACCCAGGTGTGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 407387 307 - 4471408 TAAAACTTAAAGAGCCTGCAGAGATGTCTCATAGGTCTGGTCCTTGGagaggaagatcttgactagagagttgaatttgggaatcatcagcaGT-GATATGGAGTATGATCTCTTAGAGAGAGGTC-----ACTTTACTTTTCATTGCTCCAACTCAACTTCCCATCAGTTCCAAGAAGCTGACAGCCTT-AA-CCATCTC----CTAAGAGTGGTAAATGGAATGCCATGGTCTGGA--TATTTGACAGAGGTGGGATGGTGCAAGGATGGagagctcagcctctggcagcaggttgccatatcccagacccagctgtgt i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4656486 309 - 122678785 TAAAGTTTGAAGGACCTGAGGAGATGTTTCatgagtctagtcctgggagggagaggtcttgaccaaagagttgaatttgggtgtcatcagtaatagatacag-gtatGATCTCCTAAAGAGAGATC-----ACTTTACTTTTCGTTACTTCAGCTTAACTTCCTGTCAGTTCCAAGAAGACTACAGCTTT-AAGCCATCTCCTCTCTAAGAGTGATAAGCAGAATGCCAAGGTCTAGA--TATTTGACAGAGGTGGATtagcacag---tggagagcccagcctctggcagcagattaccagggcccaaacccagttcatt i canFam3.chr1 I 4 I 1 s dasNov3.JH563638 393518 277 + 643850 TAAAATTTGAAGGGCCTGAGGAGAT------------------TTGCAG-----GGTCTGAACTGGAGAGTTAATCTTGGGGGTCATTACCAGTAAATATGG-GTATGATCTCCTAAAGAGAGGTCTGTTCACGTTTCTTTTCATTGCTCTAGCTTAATTTCCTGTCCATT----------GAAAGCCTTCAG-CTTTATC----TTAAGAATGATAAACAGAATGTCATGATCTAGAGGTATTTGACagaggttatatagtgcagtactggaaagct-agcctctgaaggcagactaccaaact----acttagctttgt i dasNov3.JH563638 C 0 I 1 e proCoq1.NW_012149263v1 613321 297 + 2501019 I e micMur3.chr22 3997187 285 - 30143674 I e otoGar3.GL873654 5530647 3037 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=30600.000000 s hg38.chr19_GL383574v1_alt 127724 2 + 155864 GG s panTro5.chr19 36195335 2 + 61309027 gg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39939561 2 + 64411610 GG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351279 2 - 8369475 gg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63948797 2 - 106955855 gg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264143 2 + 53671032 GG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718057 2 + 59248254 gg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4590430 2 - 13342542 GG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5514324 2 + 7714307 GG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29318302 2 + 50890351 gg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 950628 2 - 2385121 GG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2392562 2 + 4274983 gg i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5455649 2 + 8899380 GG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1661269 2 - 2680843 GG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 407694 2 - 4471408 gg i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 613618 2 + 2501019 GG i proCoq1.NW_012149263v1 I 297 C 0 s canFam3.chr1 4656796 2 - 122678785 gg i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 393796 2 + 643850 gg i dasNov3.JH563638 I 1 C 0 e micMur3.chr22 3997187 285 - 30143674 I e otoGar3.GL873654 5530647 3037 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=569105.000000 s hg38.chr19_GL383574v1_alt 127726 45 + 155864 TGACCACTACCTTAGCCATGTGGTGAGAACATGAAGAACTCACTT s panTro5.chr19 36195337 45 + 61309027 tgaccattaccttagccatgtggtgagaacatgaagaactcactt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39939563 45 + 64411610 TGACCATTACCTTAGCCATGTGGTGAGAACATGAAGAACTCACTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351281 45 - 8369475 tgaccattaccttagccatgtggtgagaacatgaagaactcactt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63948799 45 - 106955855 tgaccattaccttagccgtgtggtgagaacatgaagaactcactt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264145 45 + 53671032 TGACCATTCTCTTAGCCATGTGTTGAGAACGTGAAGAACTCACTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718059 45 + 59248254 tgaccattctcttagccatgtgttgagaacgtgaagaactcactt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4590432 45 - 13342542 TGACCATTCTCTTAGCCATGTATTGAGAACGTGAAGAACTCACTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5514326 45 + 7714307 TGACCATTATCTTAGCCATGTGGTGAGAACATGAAGAACTCACTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29318304 45 + 50890351 tgaccattatcttagccatgtggtgagaacatgaagaactcactt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 950630 45 - 2385121 TGACCATTATCTTAGCCATGTGGTGAGAACATGAAGAACTCACTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2392564 45 + 4274983 tgaccattatcttaaccatgtggtgagaacgtgaagaactcactt i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5455651 45 + 8899380 TGACCACTACCTTAGCCATGTGGTGAGAACATGAAGAACTCACTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1661271 44 - 2680843 TGACCACTA-CTTAGCCATGTGGTGAGAACATGAAGAACTCACTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 407696 45 - 4471408 tgaccactaccttagccatgtagtgagaacatgaagaactcactt i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3997472 45 - 30143674 TGACTACTGCCTTACCCACGTGGTAAGAACCTGAAGAACTCACTT i micMur3.chr22 I 285 C 0 s proCoq1.NW_012149263v1 613620 45 + 2501019 TGACTACTACCTTACCCACGTGGTAAGAACCTGAAGAACTCACTT i proCoq1.NW_012149263v1 C 0 I 156 s canFam3.chr1 4656798 45 - 122678785 tgactactaccttagccatgtggcaagaacttgaaaaactccctt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 393798 39 + 643850 tggctac-accttaagcacgt-----gacctcagagaactcactt i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5530647 3037 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=335974.000000 s hg38.chr19_GL383574v1_alt 127771 34 + 155864 CATCTTATTAGATGCCTCacctaccttatggggt s panTro5.chr19 36195382 34 + 61309027 catcttattagatgcctcacctaccttatggggt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39939608 34 + 64411610 CATCTTATTAGATGCCTCacctaccttatggggt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351326 34 - 8369475 catcttattagatgcctcacctaccttatggagt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63948844 34 - 106955855 catcttgtgagatgcctcacctaccttatggggt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264190 34 + 53671032 CATCTTGTTAGATGCCTCacctaccttacggggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718104 34 + 59248254 catcttgttagatgcctcacctaccttacggggt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4590477 34 - 13342542 CATCTTGTTAGATGCCTCacctaccttacggggt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5514371 34 + 7714307 CATCTTGTTAGATGCCTCacctaccttacggggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29318349 34 + 50890351 catcttgttagatgcctcacctaccttacggggt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 950675 34 - 2385121 CATCTTGTTAGATGCCTCacctaccttacggggt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2392609 34 + 4274983 catcttgttaggtgcctcacctaccttacagggt i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5455696 34 + 8899380 TACCTGGTTAGATGCCTCacctaccttatggggt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1661315 34 - 2680843 TACCTCCTTAGATGCCTCacctaccttatggggt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 407741 34 - 4471408 cacctcgttagatgcctcacctaccttatggggt i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3997517 34 - 30143674 AACCTCTTtatatgcctcacctacctcacagggt i micMur3.chr22 C 0 C 0 s canFam3.chr1 4656843 34 - 122678785 aactgctttagaagatttacctacctcacagggt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 393837 6 + 643850 ------------------aacttc---------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 613665 156 + 2501019 I e otoGar3.GL873654 5530647 3037 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=90600.000000 s hg38.chr19_GL383574v1_alt 127805 8 + 155864 cattgtga s panTro5.chr19 36195416 8 + 61309027 cattgtga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39939642 8 + 64411610 cattgtga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351360 8 - 8369475 cattgtga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63948878 8 - 106955855 cattgtga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264224 8 + 53671032 cattgtga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718138 8 + 59248254 cattgtga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4590511 8 - 13342542 cattgtga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5514405 8 + 7714307 cattgtga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29318383 8 + 50890351 cattgtga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 950709 8 - 2385121 cattgtga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2392643 8 + 4274983 cattgtga i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5455730 8 + 8899380 cattgtga i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1661349 8 - 2680843 cattgtga i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 407775 8 - 4471408 cattgtga i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3997551 8 - 30143674 cattgtga i micMur3.chr22 C 0 I 492 e proCoq1.NW_012149263v1 613665 156 + 2501019 I e dasNov3.JH563638 393843 0 + 643850 C e otoGar3.GL873654 5530647 3037 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e canFam3.chr1 4656877 0 - 122678785 C e calJac3.chr22 28602300 1679 + 49145316 I a score=591049.000000 s hg38.chr19_GL383574v1_alt 127813 69 + 155864 taaccttgtaatttgataacacggccaggtgtgatggcttacgcctgtaatcccagcactttgggaggc s panTro5.chr19 36195424 69 + 61309027 taaccttgtaatttgataacacggccaggtgtgatggcttacgcctgtaatcccagcactttgggaggc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39939650 69 + 64411610 taaccttgtaatttgataacacggccaggtgtgatggcttacgcctgtaatcccagcactttgggaggc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351368 69 - 8369475 taaccttgtaatttgataacacggccaggtgtgatggcttatgcctgtaatcccagcactttgggaggc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63948886 69 - 106955855 taaccttgtaatttgataatacagccaggtgtgatggcttacgcctggaatcccagcactttaggaggc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264232 69 + 53671032 taacctcgtaatttgataacatggccaggtatgatggcttatgcctgtaatcccggcactttgggaggc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718146 69 + 59248254 taacctcgtaatttgataacatggccaggtatgatggcttatgcctgtaatcccggcactttgggaggc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4590519 69 - 13342542 taacctcgtaatttgataacatggccaggtatgatggcttatgcctgtaatcccggcactttgggaggc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5514413 69 + 7714307 taacctcgtaatttgataacacggccaggtatgatggcttatgcctgtaatcccagcactttgggaggc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29318391 69 + 50890351 taaccttgtaatttgataacacggccaggtatgatggcttatgcctgtaatcccagcgctttgggaagc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 950717 69 - 2385121 taaccttgtaatttgataacacagccaggtatgatggcttatgcctgtaatcccagcactttgggaggc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2392651 69 + 4274983 taacctcgtaatttgataacatggccaggtatgatggcttatgcctgtaatcccagcactttgggaggc i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5455738 69 + 8899380 taacctcctaatttgataatacggccaagtacactgacttatacctgtaatcccagcactttggaaggc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1661357 69 - 2680843 taacctccgaatttgataacacggccaagtgcaatgacttacacctgtaatcccagcactttggaaggc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 407783 69 - 4471408 taacctcctaatttgataacatggccaagtgcgatgacttatacctgtaatcccagcactttgagaggc i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 393843 13 + 643850 --------------------------------------------------------cactttaggtggc i dasNov3.JH563638 C 0 I 35 e proCoq1.NW_012149263v1 613665 156 + 2501019 I e micMur3.chr22 3997559 492 - 30143674 I e otoGar3.GL873654 5530647 3037 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e canFam3.chr1 4656877 0 - 122678785 C e calJac3.chr22 28602300 1679 + 49145316 I a score=419234.000000 s hg38.chr19_GL383574v1_alt 127882 50 + 155864 caaggaggttggatcacttgaggtcaggagttcgagaccagtctggct--aa s panTro5.chr19 36195493 50 + 61309027 cgaggaggttggatcacttgaggtcaggagttcgagaccagtctggct--aa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39939719 50 + 64411610 cgaggaggttggatcacttgaggtcaggagttcgagaccagtctggct--aa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351437 50 - 8369475 cgaggaggttggatcacttgaggtcaggagttcgagaccagtctggct--aa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63948955 50 - 106955855 cgaggaggttggatcacttgaggtcaggagtttgagaccagtctggct--aa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264301 50 + 53671032 caaggaggttggatcacttgaggtcaggagttcaagaccagcctggtt--aa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718215 50 + 59248254 caaggaggttggatcacttgaggtcaggagttcaagaccagcctggtt--aa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4590588 50 - 13342542 caaggaggttggatcacttgaggtcaggagttcaagaccagcctggtt--aa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5514482 50 + 7714307 caaggaggttggatcacttgaggtcaggagttcaagaccagcctggtt--aa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29318460 50 + 50890351 caaggaggttggatcacttgaggtcaggagttcaagaccagcctggtt--aa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 950786 50 - 2385121 caaggaggttggatcacttgaggtcaggagttcaagaccagcctggtt--aa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2392720 50 + 4274983 cgaggaggttggatcacttgaggtcaggagttcaagactagcctggtt--aa i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5455807 52 + 8899380 tgagaaggtcgcatcacttgaggttaggagtttgagaacagcctgactaaaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1661426 50 - 2680843 tgagaaggtcagatcacttaaggttagaggtttgagaacagcctggct--aa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 407852 50 - 4471408 tgagaaggtcggatcacttgacgttaggagtttgagaacagcctggct--aa i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 613665 156 + 2501019 I e micMur3.chr22 3997559 492 - 30143674 I e dasNov3.JH563638 393856 35 + 643850 I e otoGar3.GL873654 5530647 3037 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e canFam3.chr1 4656877 0 - 122678785 C e calJac3.chr22 28602300 1679 + 49145316 I a score=347132.000000 s hg38.chr19_GL383574v1_alt 127932 39 + 155864 catggtgaaaactgtctcgactaaaaacacaaaaattag s panTro5.chr19 36195543 39 + 61309027 catggtgaaaactgtctcgactaaaaacacaaaaattag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39939769 39 + 64411610 catggtgaaaactgtctcgactaaaaacacaaaaattag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351487 39 - 8369475 catggtgaaaactgtctcgactaaaaacacaaaaattag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949005 39 - 106955855 catggtgaaaactgtctcgactaaaaatacaaaaattag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264351 39 + 53671032 catggtgaaaaccatctcgactaaaaacacaaaaattag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718265 39 + 59248254 catggtaaaaaccatctcgactaaaaacacaaaaattag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4590638 39 - 13342542 catggtgaaaaccatctcgactaaaaacacaaaaattag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5514532 39 + 7714307 catggtgaacaccatctcgactaaaaacacaaaaattag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29318510 39 + 50890351 catggtgaaaagcatctcgactaaaaacacaaaaattag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 950836 39 - 2385121 catggtgaacaccatctcgactaaaaacacaaaaattag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2392770 39 + 4274983 catggtgaaaaccatctcgactgaaaacacaaaaattag i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5455859 39 + 8899380 catggtgaaaaccatctcaactaaaatcgtaagaattag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1661476 39 - 2680843 catggtgaaaaccatctcgactaaaaacataagaattag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 407902 39 - 4471408 catggtgaaaaccatctcgactaaaaacataagaattag i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4656877 20 - 122678785 cattgtgagaatt-------------------aaattag i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 613665 156 + 2501019 I e micMur3.chr22 3997559 492 - 30143674 I e dasNov3.JH563638 393856 35 + 643850 I e otoGar3.GL873654 5530647 3037 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=1302331.000000 s hg38.chr19_GL383574v1_alt 127971 166 + 155864 ccaggtgt-gtgacgcacacctgtactcccagctacttgggaggctgaggctggtcaatcacttgaacccaggagatggagattgcagtgagccgagattgtgccactgtactccagcctgggcttaacagagcaagatcctgtcttga----------------------------aaataaataaataaatat s panTro5.chr19 36195582 176 + 61309027 ccaggtgt-gtgacgcacgcctgtactcccagctacttgggaggctgaggctggtcaatcacttgaacccaggagatggagattgcagtgagccgagattgtgccactgtgctccagcctgggc--aacagagcaagatcctgtctTGA--------aaataaa--------taaataaataaataaataaatat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39939808 168 + 64411610 ccaggtgt-gtgacgcacgcctgtactcccagctacttgggaggctgaggctggtcaatcacttgaacccaggagatggagattgcagtgagccgagattgtgccactgtgctccagcctgggc--aacagagcaagatcctgtcttga------------------------aaataaataaataaataaatat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351526 168 - 8369475 ccaggtgt-gtgacgcacgcctgtactcccagctacttgggaggctgaggctggtcaatcacttgaacccaggagatggagattgcagtgagccgagattgtgccactgtactccagcctgggc--agcagagcaagatcctgtcttga------------------------aaataaataaataaataagtat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949044 173 - 106955855 acaggtgtggtgacgcactcctgtactcccagctgcttgggagtctgaggctggtcaatcgcttgaacccaggaggtggagattgcagtgagccgagattgtgccactgtactccagcctgggc--aacagagcaagaccctgtctcga------------aaa--------aaaataaataaataaataaattt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264390 181 + 53671032 ccaggcgtggtggtgcatgcctgtactcccagttacttgggaggctgaggctggtcagtcgcttgaacccagaaggtggagattgcagtgagccgagattgtgccactgcactccagcctggcc--agcagaggaagaccctgtctcGA----aaataaataaa--------taaataaataaataaataaattt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718304 185 + 59248254 ccaggcgtggtggtgcatgcctgtactcccagttacttgggaggctgaggctggtcagtcgcttgaacccagaaggtggagattgcagtgagccgagattgtgccactgcactccagcctggcc--agcagaggaagaccctgtctcGAaaataaataaataaa--------taaataaataaataaataaattt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4590677 185 - 13342542 ccaggcgtggtggtgcatgcctgtactcccagttacttgggaggctgaggctggtctgtcgcttgaacccagaaggtggagattgcagtgagccgagattgtgccactgcactccagcctggcc--agcagaggaagaccctgtctcGAaaataaataaataaa--------taaataaataaataaataaattt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5514571 185 + 7714307 ccaggcgtggtggtgcatgcctgtactcccagttacttgggaggctgaggccggtcagtcgcttgaacccagaaggtggagattgcagtgagctgagattgtgccactgcactccagcctggcc--agcagaggaagaccctgtctcGAaaataaataaagaaa--------taaataagtaaataaataaattt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29318549 189 + 50890351 ccaggcgtggtggtgcatgcctgtactcccagttacttgggaggctgaggccgttcagtcgcttgaacccagaaggtggagattgcagtgagccgagattgtgccactgcactccagcctggcc--agcagaggaagaccctgtctcGAaaataaataaataaataaa----taaataaataaataaataaattt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 950875 193 - 2385121 ccaggcgtggtggtgcatgcctgtactcccagttacttgggaggctgaggccggtcagtcgcttgaacccagaaggtggagattgcagtgagctgagattgtgccactgcactccagcctggcc--agcagaggaagaccctgtctcGAaaataaataaataaataaataagtaaataagtaaataaataaattt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2392809 181 + 4274983 ccaggtgtggtggtgcatgcctgtactcccagttacttgggaggctgaggccggtcaattgcttgaacccaggaggtggagattgcagtgagccgagattgtgccactgcactccagcctggcc--agcagaggaagaccctgtctcga----aaatagataga--------taaataaataaataaataaattt i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5455898 161 + 8899380 ccggatgtggtggctcgtgcctatagtcccagctacttgggaagctgaagccagacaatcgcttgagcccaggaggtgatgattgcagtgaaccaagattgagccactgcactccagcctgagc--aacagaccaagaccctgtctcga--------------------------------aaataaataaattt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1661515 165 - 2680843 ccggacgtggtggcacgtgcctgtagtcccagctacttgggaggctgaagccagacaattgcatgagcccaggaggtggcgtttgcagtgaaccaagattgagccactgcactccagcctgagc--aacagaccaagaccctgtctcga----------------------------aaataaataaataaattt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 407941 165 - 4471408 ccagacgtggtagcacgggcctgtagtcccagctacgtgggtggctgaagccagacaatagcttgaacctaggaggtggtgattgcagtgaaccaagattgagccactgtactccagcctgagc--aacagaccaagaccctgtctcaa----------------------------aagtaaataaataaattt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 613665 156 + 2501019 I e micMur3.chr22 3997559 492 - 30143674 I e dasNov3.JH563638 393856 35 + 643850 I e otoGar3.GL873654 5530647 3037 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e canFam3.chr1 4656897 0 - 122678785 C e calJac3.chr22 28602300 1679 + 49145316 I a score=600673.000000 s hg38.chr19_GL383574v1_alt 128137 61 + 155864 gataa--catgtgaa--gtgcatagcacagtgcctggctct---taccca--cagttaatgtcagctgtt s panTro5.chr19 36195758 61 + 61309027 gataa--catgtaaa--gtgcatagcacagtgcctggctct---taccca--cagttaatgtcagctgtt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39939976 61 + 64411610 gataa--catgtaaa--gtgcatagcacagtgcctggctct---taccca--cagttaatgtcagctgtt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351694 61 - 8369475 gataa--catgtaaa--gtgcgtagcacagtgcctggctct---taccca--cagttaatgtcagctgtt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949217 61 - 106955855 gataa--catgtaaa--gtgcatagcacagtgcctggcTCT---TACCTA--CAGTTAATGTCAGCTGTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264571 61 + 53671032 gataa--catgtaaa--gtgcatagcacagtgcctggcTCT---TACCCA--CAGTTAATATCAGCTGTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718489 61 + 59248254 gataa--catgtaaa--gtgcatagcacagtgcctggcTCT---TACCCA--CAGTTAATATCAGCTGTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4590862 61 - 13342542 gataa--catgtaaa--gtgcatagcacagtgcctggcTCT---TACCCA--CAGTTAATATCAGCTGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5514756 61 + 7714307 gataa--catgtaaa--gtgcatagcacagtgcctggcTCT---TACCCA--TAGTTAATGTCAGCTGTT i cerAty1.NW_012005268v1 C 0 I 342 s chlSab2.chr6 29318738 61 + 50890351 gataa--catgtaaa--gtgcatagcacagcacctggctct---taccca--cggttaatgtcagctgtt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951068 61 - 2385121 gataa--catgtaaa--gtgcatagcacagtgcctggcTCT---TACCCA--CAGTTAGTGTCAGCTGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2392990 61 + 4274983 gataa--catgtaaa--ctgcatagcacagtgcctggcTGT---TACCCA--CAGTTAATGTCAGCTGTT i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5456059 63 + 8899380 gataacacgtgtaaa--gtacatagcacagtgcctggctct---tataca--cagtTAATGTCAGTGTTT i saiBol1.JH378197 C 0 I 24 s cebCap1.NW_016107633v1 1661680 63 - 2680843 gataacgcatgtgaa--gtacatagcacagtgcctggctct---tataca--cagttaatgtcagtGTTT i cebCap1.NW_016107633v1 C 0 I 24 s aotNan1.NW_018505377v1 408106 63 - 4471408 gataacacatgtaaa--gtacatagcagagtgcctggctct---tataca--cagttaatgtcagtgttt i aotNan1.NW_018505377v1 C 0 I 24 s canFam3.chr1 4656897 67 - 122678785 -ataatacacgtgaa--atgcatagcacagagcctggcaccaagtacccatttggttaatgtcagctatt i canFam3.chr1 C 0 I 4 s dasNov3.JH563638 393891 64 + 643850 gatga--cacatgaatcgagtgtagcacagtgtctgccact--ttgtgtt--cagttaatgtcagctgtt i dasNov3.JH563638 I 35 C 0 e proCoq1.NW_012149263v1 613665 156 + 2501019 I e micMur3.chr22 3997559 492 - 30143674 I e otoGar3.GL873654 5530647 3037 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=53152.000000 s hg38.chr19_GL383574v1_alt 128198 12 + 155864 ------------------------TCAagatatttg-- s panTro5.chr19 36195819 12 + 61309027 ------------------------TCAagatatttg-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940037 12 + 64411610 ------------------------TCAagatatttg-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351755 12 - 8369475 ------------------------tcaagatatttg-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949278 12 - 106955855 ------------------------TCAagatatttg-- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264632 12 + 53671032 ------------------------TCAAGTTATTTt-- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718550 12 + 59248254 ------------------------TCAAGTTATTTt-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4590923 12 - 13342542 ------------------------TCAAGTTATTTt-- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5515159 12 + 7714307 ------------------------TCAAGTTATTTt-- i cerAty1.NW_012005268v1 I 342 C 0 s chlSab2.chr6 29318799 12 + 50890351 ------------------------tcaagttatttt-- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951129 12 - 2385121 ------------------------TCAAGTTATTTT-- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393051 12 + 4274983 ------------------------TCAAGTTATTTt-- i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5456146 12 + 8899380 ------------------------tgaagagattgg-- i saiBol1.JH378197 I 24 C 0 s cebCap1.NW_016107633v1 1661767 12 - 2680843 ------------------------tgaagagattgg-- i cebCap1.NW_016107633v1 I 24 C 0 s aotNan1.NW_018505377v1 408193 12 - 4471408 ------------------------tgaagagattgg-- i aotNan1.NW_018505377v1 I 24 C 0 s canFam3.chr1 4656968 12 - 122678785 ------------------------TTagggttctag-- i canFam3.chr1 I 4 I 20 s dasNov3.JH563638 393955 38 + 643850 tttattTTaggactgtagtgaggattaagtgagattat i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 613665 156 + 2501019 I e micMur3.chr22 3997559 492 - 30143674 I e otoGar3.GL873654 5530647 3037 + 5549422 I e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=10028.000000 s hg38.chr19_GL383574v1_alt 128210 1 + 155864 a s panTro5.chr19 36195831 1 + 61309027 a i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940049 1 + 64411610 a i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351767 1 - 8369475 a i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949290 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264644 1 + 53671032 a i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718562 1 + 59248254 a i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4590935 1 - 13342542 a i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5515171 1 + 7714307 a i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29318811 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951141 1 - 2385121 A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393063 1 + 4274983 a i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5456158 1 + 8899380 a i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1661779 1 - 2680843 a i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 408205 1 - 4471408 a i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5533684 1 + 5549422 a i otoGar3.GL873654 I 3037 C 0 s canFam3.chr1 4657000 1 - 122678785 g i canFam3.chr1 I 20 C 0 s dasNov3.JH563638 393993 1 + 643850 g i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 613665 156 + 2501019 I e micMur3.chr22 3997559 492 - 30143674 I e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=871398.000000 s hg38.chr19_GL383574v1_alt 128211 67 + 155864 tatctaaagctccaagtataatgcttggcacgtcatagacacttagtgactggtCCATTTCTTTGGG s panTro5.chr19 36195832 67 + 61309027 tatctaaagctccaagtataatgcttggcacgtcatagacacttagtgactggtCCATTTCTTTGGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940050 67 + 64411610 tatctaaagctccaagtataatgcttggcacgtcatagacacttagtgactggtCCATTTCTTTGGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351768 67 - 8369475 tatctaaagctccaagtataatgcttggcacgtcatagacacttagtgactggtCCATTTCTTTGGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949291 67 - 106955855 tatctaaagctccaagtataatgcttggcacatcatagacacttagtgactggtGCATTTCTTTGGG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264645 67 + 53671032 tatctaaagctccaagtataatgcttggcacgtcgtagacacttagtgactggtCCATTTCTTTGGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718563 67 + 59248254 tatctaaagctccaagtataatgcttggcacgtcgtagacacttagtgactggtCCATTTCTTTGGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4590936 67 - 13342542 tatctaaagctccaagtataatgcttggcacgtcgtagacacttagtgactggtCCATTTCTTTGGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5515172 67 + 7714307 tatctaaagctccaagtataatgcttggcacgtcgtagacacttagtgactggtCCATTTCTTTGGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29318812 67 + 50890351 tacctaaagctccaagtataatgcttggcacgtcgtagacacttagtgactggtCCATTTCTTTGGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951142 67 - 2385121 TATCTAAAGCTCCAAGTGTAATGCTTGGCACGTCGTAGACACTTAGTGACTGGTCCATTTCTTTGGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393064 67 + 4274983 tatctaaagctccaagtataatgcttgacacgtcgtagacacttagtgactggtCCATTTCTTTGGG i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5456159 67 + 8899380 tacctaaagctctaagtataatgcttggcatgtcatggacacttagtgactggtCCATTTCTTTGGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1661780 67 - 2680843 tacctaaagctccaagtataatgcttggcatgtcatagacacttagtgactggtCCATTTCTTTGGG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 408206 67 - 4471408 tacctaaagctccaagtataatgcttggcatgtcatagacacttagtgactggtCCATTTCTTTGGG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 613821 67 + 2501019 tatctaaagctccaagtctaatgcttgacatgtcctaggcacttggtgagtggCCTGTTTTGTCGGG i proCoq1.NW_012149263v1 I 156 C 0 s otoGar3.GL873654 5533685 67 + 5549422 tatctcaagctctaagtataatgcttgacactttataggcacttagtgagtggtCCACTTTGTTGGG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4657001 65 - 122678785 tatctaaagttt--agtttaatgcttgacaggttgtcggcccttaatgaatagtctgttttattGAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 393994 64 + 643850 tacgtacagctccagggttaatgcttggcatgttgtatgcatttaatgaatggtCTTCTTTGTT--- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3997559 492 - 30143674 I e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=1370383.000000 s hg38.chr19_GL383574v1_alt 128278 107 + 155864 GAGTACTTATGTGGACGTGGCATGTCTTCACTAGC-----TTATTTAT---TTATTTTAAGCAGAACCTTATTTCT-AGCATCTAACTACTGCCTCCGTGGTTGGC-------AAGG-GTGACT s panTro5.chr19 36195899 103 + 61309027 GAGTACTTGTGTGGACGTGGCATGTCTTCACCAGC---------TTAT---TTATTTTAAGTAGAACCTTATTTCT-AGCATCTAACTACTGCCTCTGTGGTTGGC-------AAGG-GTGACT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940117 107 + 64411610 GAGTACTTGTGTGGACGTGGCATGTCTTCACCAGC-----TTATTTAT---TTATTTTAAGTAGAACCTTATTTCT-AGCATCTAACTACTGCCTCTGTGGTTGGC-------AAGG-GTGACT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351835 107 - 8369475 GAGTACTTGTGTGGACGTGGCATGTCTTCACCAGC-----TTGTTTAT---TTATTTTAAGCAGAACGTTATTTCT-AGCATCTAACTACTGCCTCCGTGGTTGGC-------AAGG-GTGACT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949358 107 - 106955855 GAATACTTGTGTGGACGTGGCATGTCTTCACCAGC-----TTATTTAT---TTATTTTAAGCAGAACCTTATTTCT-AGCATCTAACTACTGCCTCCGTGGTTGGC-------AAGG-GTGACT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264712 107 + 53671032 GAGTACTTGTGTGGATGTGGCATGTCTTCACTAGC-----TTATTTAT---TTATTTTAAACAGAACCTTATTTCT-AGCATCTAACTGCTGCCTCTGTGGTTGGC-------AAGC-GTGACT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718630 107 + 59248254 GAGTACTTGTGTGGATGTGGCATGTCTTCACTAGC-----TTATTTAT---TTATTTTAAACAGAACCTTATTTCT-AGCATCTAACTGCTGCCTCTGTGGTTGGC-------AAGC-GTGACT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4591003 107 - 13342542 GAGTACTTGTGTGGATGTGGCATGTCTTCACTAGC-----TTATTTAT---TTATTTTAAACAGAACCTTATTTCT-AGCATCTAACTGCTGCCTCTGTGGTTGGC-------AAGC-GTGACT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5515239 105 + 7714307 GAGTACTTGTGTGGATGTGGCATGTCTTCACCAGC-----TTATTTAT---TTATTTTAAACAGAACCTTATTTCT-AGCATCTAACTGCTGCCTC--TGGTTGGC-------AAGG-GTGACT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29318879 107 + 50890351 GAGTACTTGTGTGGATGTGGCATGTCTTCACCAGC-----TTATTTAT---TTATTTTAAACAGAACCTTATTTCT-AGCATCTAACTGCTGCCTCTGTGGTTGGC-------AAGG-GTGACT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951209 107 - 2385121 GAGTACTTGTGTGGATGTGGCATGTCTTCACCAGC-----TTATTTAT---TTATTTTAAACAGAACCTTATTTCT-AGCATCTAACTGCTGCCTCTGTGGTTGGC-------AAGG-GTGACT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393131 107 + 4274983 GAGTACTTGTGTGGACGTGGCATGTCTTCACCAGC-----TTATTTAT---TTATTTTAAACAGAGCCTTATTTCT-AGCATCTAACTGCTGCCTCTGTGGTTGGC-------AAGG-GTGACT i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5456226 104 + 8899380 GAGTACTTGTGTGGCTGTGGAATGTCTTCAGTAGC--------TTTAT---TTATTTTAAGCAGAACCTTATTTCT-AGCATCCAACTACTACCTCTGTGGTTGGC-------AAGG-GTGACT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1661847 104 - 2680843 GAGTACTTATGTGGCCATGGAATGTCTTCAGTAGC--------TTTAT---TTATTTTAAGCAGAACCTTATTTCT-AGCATCTAACTACTACCTCTGTGGTTGGC-------AAGG-ATGAAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 408273 104 - 4471408 GAGTACTTGTGTGGCCGTGGAATGTCTTCAGTAGC--------TTTAT---TTATTTTAAGCAGAACCTTATTTCT-AGCATCTAACTACTACCTCTGTAGTTGGC-------AAGG-GTGATT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3998051 110 - 30143674 GAGTACTTGTGTGAATGTGGCATATCTTCAGTAGC-----TTATTTATTTATTTTTTTAAGCAGAACCTTATTTCT-AACACTTAATTACTACCTCTGTGGATTGT-------AAGG-GTGACT i micMur3.chr22 I 492 I 103 s proCoq1.NW_012149263v1 613888 110 + 2501019 GAGTACTTGTGTGGATGTGGCATATCTTCCGTATC-----TCATTTATTTATTTTTTTAAGCAGAGCCTTATTTCT-AGCACTTAATTACTACCTTTGTGGATTGT-------AAGG-GTGACT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5533752 106 + 5549422 -AGTACTTGTGTGAACGTGATATATCTCTGGTAGC-----TTAGTTAT---TTTTTTAATGCAGAACCTTATTTCT-AGTGCTTAATTACTGCCTCCATGGATTAT-------AAGG-GTGACT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4657066 119 - 122678785 GAGTACTTGCATTAACATAGCATGTCATCTGTAGCttttttttttttt---tttttttAAATAGAGGCTTATTTCT-AACACTTAACTACTGCTTCTGTGGATGGCTTCTGTGGATG-GCAACC i canFam3.chr1 C 0 I 4 s dasNov3.JH563638 394058 98 + 643850 GAGTATTTGTGTGAACATGGCATCTCATAAGCAGT-----CT-----T---TTTTTTTAAACAGACCCTTGTTTTTAAGCACTT------TGTCTCTGTGGATGGT-------AGGATTTGACT i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=133491.000000 s hg38.chr19_GL383574v1_alt 128385 13 + 155864 TCATGAATGTTGT s panTro5.chr19 36196002 13 + 61309027 TCATGAATGTTGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940224 13 + 64411610 TCATGAATGTTGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351942 13 - 8369475 TCATGAATGTTGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949465 13 - 106955855 TCATGAATGTTGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264819 13 + 53671032 TCACGAACGTTGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718737 13 + 59248254 TCACGAACGTTGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4591110 13 - 13342542 TCACGAACGTTGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5515344 13 + 7714307 TCACGAATGTTGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29318986 13 + 50890351 TCACGAATGTTGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951316 13 - 2385121 TCACGAATGTTGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393238 13 + 4274983 TCACGAATGTTGT i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5456330 13 + 8899380 TCATGAATGTTGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1661951 13 - 2680843 TCATGAATGTTGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 408377 13 - 4471408 TCATGAATATTGT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 613998 11 + 2501019 --GCTTATGCCGT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5533858 10 + 5549422 ---GCTATGCTGT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4657189 13 - 122678785 GCCTGAATGCTGT i canFam3.chr1 I 4 I 1 s dasNov3.JH563638 394156 9 + 643850 ----GGATGCTGT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3998161 103 - 30143674 I e mm10.chr7 111140965 731 - 145441459 I e calJac3.chr22 28602300 1679 + 49145316 I a score=147267.000000 s hg38.chr19_GL383574v1_alt 128398 15 + 155864 ----AAAGGAATACCATTA s panTro5.chr19 36196015 15 + 61309027 ----AAAGAAATACCATTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940237 15 + 64411610 ----AAAGAAATACCATTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351955 15 - 8369475 ----AAAGAAATACCATTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949478 15 - 106955855 ----AAAGAAATACCATTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264832 15 + 53671032 ----AAAGAAATATCTTTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718750 15 + 59248254 ----AAAGAAATATCTTTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4591123 15 - 13342542 ----AAAGAAATATCTTTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5515357 15 + 7714307 ----AAAGAAATACCTTTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29318999 15 + 50890351 ----AAAGAAATACCTTTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951329 15 - 2385121 ----AAAGAAATACCTTTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393251 15 + 4274983 ----AAAGAAATATCTTTA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28603979 15 + 49145316 ----aaataaaTAACATTA i calJac3.chr22 I 1679 C 0 s saiBol1.JH378197 5456343 15 + 8899380 ----AAAGAAATAAAATTA i saiBol1.JH378197 C 0 I 829 s cebCap1.NW_016107633v1 1661964 15 - 2680843 ----AAAGAAATAAAATTT i cebCap1.NW_016107633v1 C 0 I 1 s aotNan1.NW_018505377v1 408390 15 - 4471408 ----AAAGAAATAAAATTA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 614009 15 + 2501019 ----GCAGAGATACCACTA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5533868 15 + 5549422 ----GCGGAGATACTACTA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4657203 15 - 122678785 ----AAAAAAACACCATTC i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 394165 16 + 643850 ACAGAAAGAACTATTA--- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3998161 103 - 30143674 I e mm10.chr7 111140965 731 - 145441459 I a score=821777.000000 s hg38.chr19_GL383574v1_alt 128413 65 + 155864 AATAAGTACTGAGGACAAACTAATAATTCAACAAATATTTGTTAAATGTTTACATCATGCTTAGC s panTro5.chr19 36196030 65 + 61309027 AATAAGTACTGAGGACAAACTAATAATTCAACAAATATTTGTTAAATGTTTACATCATGCTTAGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940252 65 + 64411610 AATAAGTACTGAGGACAAACTAATAATTCAACAAATATTTGTTAAATGTTTACATCATGCTTAGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6351970 65 - 8369475 AATAAGTACTGAGGACGAACTAATAattcaacaaatatttgttaaatgtttacatcatgcttagc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949493 65 - 106955855 AATAAATACTGAGGATGAACTAATAattcaacaaatatttgttaaatgtttacatcgtgcttagc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264847 65 + 53671032 AATAAATACTGAGGGTGaactaataattcaacaaatatctattaaatgtttacaacgtgcttagc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718765 65 + 59248254 AATAAATACTGAGGGTGAACTAATAattcaacaaatatctattaaatgtttacaacgtgcttagc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4591138 65 - 13342542 AATAAATACTGAGGGTGAACTAATAattcaacaaatatctattaaatgtttacaacgtgcttagc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5515372 65 + 7714307 AATAAATACTGAGGGTGAACTAATAattcaacaaatatctattaaatgtttacaatgtgcttagc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29319014 65 + 50890351 AATAAATACTGAGGGTGAACTAATAattcaacaaatatctattaaatgtttacaacgtgcttagc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951344 65 - 2385121 AATAAATACTGAGGGTGAACTAATAattcaacaaatatctattaaatgtttacaacgtgcttagc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393266 65 + 4274983 AATAAATACTGAGGATGaactaataattcaacaagtatctgttaaatgtttacaacgtgcttagc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28603994 65 + 49145316 AATAAATACTGAGGATGCAACAATAGTTTAACAAGTGTCTGTTAAATGTTTACAATGTGCTTAGC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1661980 65 - 2680843 AATAAATACTGAGGATGaaacaataattcaacaagtatctgttaaatgtttacaatgtgcttagc i cebCap1.NW_016107633v1 I 1 C 0 s aotNan1.NW_018505377v1 408405 65 - 4471408 AATAAATACTGAGGATGaaacaataattcaacaagtatctgttaaatgtttacaatgtgcttagc i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 614024 65 + 2501019 AATAAATACTGAGGATGAACTAGCCATTCAAGAAATATCTGTTGAATGTTTGCAGTGTGCTTAGC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5533883 65 + 5549422 AATAAATACTGAGGATGAACTAGtcattcagcaaatatctgttggatgtttacagtgtgcttagc i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4657218 62 - 122678785 AACAAATACTAAGGATGA---AGtcattcaacaaatacctgttgaatgtttacagtgtgcttagc i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 394181 65 + 643850 AATAAGTACCAAGCATGAGCTAAtcattcagcaaataattactgagtgaatacaatatgtttagt i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3998161 103 - 30143674 I e mm10.chr7 111140965 731 - 145441459 I e saiBol1.JH378197 5456358 829 + 8899380 I a score=104029.000000 s hg38.chr19_GL383574v1_alt 128478 7 + 155864 ACCCTTG s panTro5.chr19 36196095 7 + 61309027 ACCCTTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940317 7 + 64411610 ACCCTTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6352035 7 - 8369475 acccttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949558 7 - 106955855 acccttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264912 7 + 53671032 acccttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718830 7 + 59248254 acccttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4591203 7 - 13342542 acCCTTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5515437 7 + 7714307 acCCTTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29319079 7 + 50890351 acccttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951409 7 - 2385121 acCCTTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393331 7 + 4274983 acCCTTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28604059 7 + 49145316 ACCCATG i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1662045 7 - 2680843 acccttg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 408470 7 - 4471408 acccttg i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 614089 7 + 2501019 ACTCTTG i proCoq1.NW_012149263v1 C 0 I 628 s otoGar3.GL873654 5533948 7 + 5549422 actcttG i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111141696 7 - 145441459 ATTCTTG i mm10.chr7 I 731 C 0 s canFam3.chr1 4657280 7 - 122678785 actCTGG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 394246 7 + 643850 actctgg i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3998161 103 - 30143674 I e saiBol1.JH378197 5456358 829 + 8899380 I a score=58390.000000 s hg38.chr19_GL383574v1_alt 128485 6 + 155864 -GATGTT s panTro5.chr19 36196102 6 + 61309027 -GATGTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940324 6 + 64411610 -GATGTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6352042 6 - 8369475 -gatgtt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949565 6 - 106955855 -gttgtt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264919 6 + 53671032 -gatgtt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718837 6 + 59248254 -gatgtt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4591210 6 - 13342542 -GATGTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5515444 6 + 7714307 -AATGTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29319086 6 + 50890351 -gatgtt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951416 6 - 2385121 -AATGTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393338 6 + 4274983 -GATGTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28604066 6 + 49145316 -GATGTC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1662052 6 - 2680843 -gatgtc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 408477 6 - 4471408 -gatgtc i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5533955 6 + 5549422 -AGTATC i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111141703 6 - 145441459 -AATGTT i mm10.chr7 C 0 C 0 s canFam3.chr1 4657287 6 - 122678785 -ACTATC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 394253 7 + 643850 gaatata i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 614096 628 + 2501019 I e micMur3.chr22 3998161 103 - 30143674 I e saiBol1.JH378197 5456358 829 + 8899380 I a score=1217392.000000 s hg38.chr19_GL383574v1_alt 128491 108 + 155864 TTGAATGAG-CTCAGGGGTCCTGGGGGTTGGAGGTGACAGGGAAACACAGAGCAAACCGGCA----------GTTGTGATC---TAGCATGTTATGCTTCAGT-AGag------ttaatgttaaggtgg s panTro5.chr19 36196108 108 + 61309027 TTGAATGAG-CTCAGGGGTCCTGGGGGTTGGAGGTGGCAGGGAAACACAGAGCAAACTGGCA----------GTTGTGATC---TAGCATGTTACGGTTCAGT-AGag------ttaatgttaagatgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940330 108 + 64411610 TTGAATGAG-CTCAGGGGTCCTGGGGGTTGGAGGTGGCAGGGAAACACAGAGCAAACTGGCA----------GTTGTGATC---TAGCATGTTACGGTTCAGT-AGag------ttaatgttaagatgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6352048 108 - 8369475 ttgaatgag-ctcaggggtcctgggggttggaggtggcagggaaacacagagcaaaccggca----------gttgtgatc---tagcatgttacggttcagt-agag------ttaatgttaagatgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949571 108 - 106955855 ttgaatgag-ctcaggggtcctgggggttgaaggtcgcagggaaacacagaacaaaccggca----------gctgtgatc---tagcatgttacggtacagt-agag------ttaatgttaagatgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30264925 108 + 53671032 ttgaatgag-ctcaggggtcctgggggttggaggtggcagggaaacccggagcgaaccggca----------gttgtgatc---tagcatgttacagtacagc-agag------ttaatgttaagatgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718843 108 + 59248254 ttgaatgag-ctcaggggtcctgggggttggaggtggcagggaaacccggagcgaaccggca----------gttgtgatc---tagcatgttacagtacagc-agag------ttaatgttaagatgg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4591216 108 - 13342542 TTGAATGAG-CTCAGGGGTCCTGGGGGTTGGAGGTGGCAGGGAAACCCGGAGCGAACCGGCA----------GTTGTGATC---TAGCATGttacagtacagc-agag------ttaatgttaagatgg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5515450 108 + 7714307 TTGAATGAG-CTCAGGGGTCCTGGGGGTTGGAGGTGGCAGGGAAACCCGGAGCGAACCGGCA----------GTTGTGATC---TAGCATGttacagtacagc-agag------ttaatgttaagatgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29319092 108 + 50890351 ttgaatgag-ctcaggggtcctgggggctggaggtggcagggaaacccggagcgaaccggca----------gttgtgatc---tagcatgttacagtacagc-agag------ttaatgttaagatgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951422 108 - 2385121 TTGAATGAG-CTCAGGGGTCCTGGGGGTTGGAGGTGGCAGGGAAACCCGGAGCGAACCGGCA----------GTTGTGATC---TAGCATGttacagtacagc-agag------ttaatgttaagatgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393344 108 + 4274983 TTGAATGAA-CTCAGGGGTCCTGGGGGTTGGAGGTGGCAGGGAAACCCAGAGCAAACTGGCA----------GTTGTGATC---TAGCATGttacagtacagc-agaa------ttaatgttaagatgg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28604072 106 + 49145316 TTGAATGAG-CTCAGTGGTCCTGGGGATTGGAGGTGGCAGGGAAACAC--AGCAAACTGGCA----------ATTGTGATC---TAGTATGttacagtacagc-agag------tgattgttaaaatgg i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1662058 105 - 2680843 ttgaatgag-ctcagtggtcctgggg-ttggaggtggcagggaaacac--agcaaactggca----------gttgtgatc---tagtatgttatagtacagc-agag------ttattgttaaaatgg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 408483 106 - 4471408 ttgaatgag-ctcagtgatcctgggggttggaggtggcagggaaacac--agcaaactggca----------gttgtgatc---tagtatgttacagtacagc-agag------ttattgttaaaatgg i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3998264 108 - 30143674 TTGAATGAG-CTCAGTGACCCTGGGGCTTGGTGGTAGGAGGGAAATGCAGAGGAAACTGGCA----------GTTGTGATG---CAGTATGTTACAGTACAGC-GAAG------CTAATGTTAAGATGG i micMur3.chr22 I 103 C 0 s otoGar3.GL873654 5533961 123 + 5549422 CTGAGTGAG-CTCAGTGATCGTGGCG-TTGGTGGTAGAAGGAAAA--CAGAGGGAAGTACCACAAAGTTAATGTTATGATGGGACTGACAGTTGCAGTG-AGC-TATGATCTCTCCACCCTGACAGAGT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111141709 89 - 145441459 TTGAATGAA-GTCAGTGATCTTGTGCCTTGGAGATAGCAGGGACATACAGGGGAGATGGTAA----------ACTGTGTTT---TAGGA----------CAGT-AATG------CTAATG--------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4657293 105 - 122678785 TTGAATGGGCCTCAGTGATCCCGTGGGTTGGATGTGGCAGGAAAGCATGGA---AACTAGTG----------G-TGTGAT----TCGCTTGttacaatacagcaaaag------agaatgtgaagacgg i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 394260 106 + 643850 ttgaatgag-tttagtgatcttggggtttggaggtggcaaggaagagcagacaaaactggta----------ggcattata---tagtatgttacaatat--t-aagg------ttaatgctaagataa i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 614096 628 + 2501019 I e saiBol1.JH378197 5456358 829 + 8899380 I a score=109571.000000 s hg38.chr19_GL383574v1_alt 128599 7 + 155864 ggctaaa s panTro5.chr19 36196216 7 + 61309027 ggctaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940438 7 + 64411610 ggctaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6352156 7 - 8369475 ggctaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949679 7 - 106955855 ggctaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30265033 7 + 53671032 ggctaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718951 7 + 59248254 ggctaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4591324 7 - 13342542 ggctaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5515558 7 + 7714307 ggctaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29319200 7 + 50890351 ggctaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951530 7 - 2385121 ggctaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393452 7 + 4274983 ggctaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28604178 7 + 49145316 ggctaaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5457187 7 + 8899380 GGCTAAA i saiBol1.JH378197 I 829 C 0 s cebCap1.NW_016107633v1 1662163 7 - 2680843 ggcaaaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 408589 7 - 4471408 ggctaaa i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 3998372 7 - 30143674 GGCTAAA i micMur3.chr22 C 0 I 565 s otoGar3.GL873654 5534084 6 + 5549422 GACTGa- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111141798 4 - 145441459 ---TAGA i mm10.chr7 C 0 C 0 s canFam3.chr1 4657398 7 - 122678785 ggctaaa i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 394366 7 + 643850 ggctaaa i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 614096 628 + 2501019 I a score=2721590.000000 s hg38.chr19_GL383574v1_alt 128606 223 + 155864 aacagggtgtt-acggca----gcagaggaaccc--ctcgctcagtc--tgtcaaagtggtttctcagaagaagtgatg-cctaagttagacatccaagaggaatgagagtgagccaagagagctttccagacagtagaaatgaaatgtgtggccaggtggcgagaaggaagatggcacatgtaggaagtgggtggtgttg---------gggcggtgtaagaa--------aattggga-agggtaatgg s panTro5.chr19 36196223 223 + 61309027 aacagggtgtt-acggca----gcagaggaaccc--ctcgctcagtc--tgtcaaagtggtttctcagaagaagtgatg-cctaagttagacatccaagaggaatgagagtgagccaagagagctttccagacagtagaaatgaaatatgtggccaggtggcgagaaggaagatggcacatgtaggaagtgggtggtgttg---------gggcggtgtaagaa--------aattggga-agggtagtgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940445 223 + 64411610 aacagggtgtt-acggca----gcagaggaaccc--ctcgctcagtc--tgtcaaagtggtttctcagaagaagtgatg-cctaagttagacatccaagaggaatgagagtgagccaagagagctttccagacagtagaaatgaaatatgtggccaggtggcgagaaggaagatggcacatgtaggaagtgggtggtgttg---------gggcggtgtaagaa--------aattggga-agggtagtgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6352163 223 - 8369475 aacagggtgtt-acggca----gcagaggaaccc--ctcgctcagtc--tgtcaaagtggtttctcagaagaagtgatg-cctaagttagacatccaagaggaatgagagtgagccaagagagctttccagacagtagaaatgaaatgtgtggccaggtggcgagaaggaagatggcacatgtaggaagtgggtggtgttg---------gggcggtgtaagaa--------aattggga-agggtagtgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949686 223 - 106955855 aacagggtgtt-acggca----gcagaggaaccc--ctcgctcagtc--tgtcaaagtggtttctcagaagaagtgatg-cctaagttagacatccaagaggaatgagagtgagccaagagagctttctagacagtggaaatgaaatgtgtggccaggtggcgagagggaagatggcacatgtaggaagtgggtggtgttg---------gggcggtgtaagaa--------aattggga-agggtagtgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30265040 219 + 53671032 aacagggtgtt-acggca----gcagaggaaccc--ctcgctcagtc--tgtcaaagtggtttctcagaagaagtgatg-cctaagttagacatccaagaggaatgagagtgagccaagagagctttccagacagtggaaatgaaaagtttggccaggtggcgagagggaagatggcacatgtaggaagtgggtggtgttg-------------ggtgtaagaa--------aattggga-aggatagtgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34718958 219 + 59248254 aacagggtgtt-acggca----gcagaggaaccc--ctcgctcagtc--tgtcaaagtggtttctcagaagaagtgatg-cctaagttagacatccaagaggaatgagagtgagccaagagagctttccagacagtggaaatgaaacgtttggccaggtggcgagagggaagatggcacatgtaggaagtgggtggtgttg-------------ggtgtaagaa--------aattggga-aggatagtgg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4591331 219 - 13342542 aacagggtgtt-acggca----gcagaggaaccc--ctcgctcagtc--tgtcaaagtggtttctcagaagaagtgatg-cctaagttagacatccaagaggaatgagagtgagccaagagagctttccagacagtggaaatgaaacgtttggccaggtggcgagagggaagatggcacatgtaggaagtgggtggtgttg-------------ggtgtaagaa--------aattggga-aggatagtgg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5515565 219 + 7714307 aacagggtgtt-acggca----gcagaggaaccc--ctcgctcagtc--tgtcaaagtggtttctcagaagaagtgatg-cctaagttagacatccaagaggaatgagagtgagccaagagagctttccagacagtggaaatgaaacgtgtggccaggtggcgagagggaagatggcacatgtaggaagtgggtggtgttg-------------ggtgtaagaa--------aattggga-agggtagtgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29319207 220 + 50890351 aacagggtgttaacggca----gcagaggaaccc--ctcgctcagtc--tgtcaaagtggtttctcagaagaagtgatg-cctaagttagacatccaagaggagtgagagtgagccaagagagctttccagacagtggaaatgaaacgtgtggccaggtggcgagagggaagatggcacatgtaggaagtgggtggtgttg-------------ggtgtaagaa--------aattggga-agggtagtgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951537 219 - 2385121 aacagggtgtt-acggca----gcagaggaaccc--ctcgctcagtc--tgtcaaagtggtttctcagaagaagtgatg-cctaagttagacatccaagaggaatgagagtgagccaagagagctttccagacagtggaaatgaaacgtgtggccaggtggcaagagggaagatggcacatgtaggaagtgggtggtgttg-------------ggtgtaagaa--------aattggga-agggtagtgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393459 219 + 4274983 aacagggtgtt-acggca----gcagaggaaccc--ctcgctcagtc--tgtcaaagtggtttctcagaagaagtgatg-cctaagttagacatccaagaggaaagagagtgagccaagagagctttccagacagtggaaatgaaacgtgtggccaggtggcgagagggaagatggcacatgtaggaagtgggtggtgttg-------------gatgtaagaa--------aattggga-agggtagtgg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28604185 219 + 49145316 aacagggtgtt-acggca----gcagagggactc--ctcgctcagtc--tgtcaaagtggcttctcagaagaattgatg--ctaagttagacctccaagaggaatgagagtgagtcaagagagctttccagac---aggaatgaaatgtatggccaggtggcgagagggaaGATGGCACACATAGGAAGTGGGTGGTGTTG---------GGGCGATGTAGGAA--------AATTGGGA-AGGGTAGTGG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5457194 221 + 8899380 AACAGGTTGTT-ATGGCA----GCAGAGGGACCC--CTCGCTCAGTC--TGTCAAAGTGGCTTGTCAGAAGAATTGATG--CTAAGTTAGACCTCCAAGAGGAATGAGAGTGAGTCAAGAGAACTTTCCAGACAG-AGGAATGAAATGTGTGGCCAGGTGGCGGGAGGGAAGATGGCACATGTAGGAAGTTGGTGGTGTTG---------GGGCAATGTAGGAA--------AATTGGGA-AGGGTAGTGG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1662170 219 - 2680843 aac--ggtgtt-acggca----gcagagggaccc--gtcactcagtc--tgtcaaagtggcttctcagaagaattgatg--ctaagttagacctccaagaggaatgagagtgagtcaagagagctttccagacag-aggaatgaaatgtgtggccaggcggccagagggaagatggcacacgtaggaagtgggtggtgttg---------gggcgatgtaggaa--------aattggga-agggtagtgg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 408596 221 - 4471408 aacagggtgtt-acggca----gcagagggatcc--ctcgctcagtc--tgtcaaagtggcttctcagaagaattggtg--ctaagttagacctccaagaggaatgagagtgagtcaagagagctttccagacag-aggaatgaaacatgtggccaggtggtgagagggaagatggcacacgtaggaagtgggtggtatcg---------gggtgatgtaggaa--------aattggga-agggtagtgg i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5534090 206 + 5549422 aacaggaggtt-aaggtaacacacaggtggaccc--ttgggttaatctttgtcaaagaggcttctccgaagaagcaatgtcttaagttagacattcaagaagagtggaagttagccaagagaactttgcagactg----------------------gtggtaag--ggaagatggcacatgtaacaagtgggtggtgggt---------agggagtgtaagaa--------ggttggga-aggacagtgg i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111141802 198 - 145441459 AACAAAGTCTG-ACAGAA---CACAATGTGAACC--TTAACTCAGTC--T--------------TTATCAAAACTACTG---------AGACATCCCAAGG-----------AGCCCAAAGAGCCTTCCAGATGCTAGGAG-GGAACAAGTAGACTGTTTGTGACAGGGAAGATGGGTCGTAAGAGAAGTAGGTGGTATTA---------GGATGAGGAAGGAGGCATGGATGCCTGGGA-AGAGCAGTGG i mm10.chr7 C 0 I 5 s canFam3.chr1 4657405 229 - 122678785 aacagagtgtt-acagcagcacacagagggtctt--ctagctcactttttgccatggtggcttcccagaggaggtgatc---taggttagat-tccaggaggagtgagaataaaccaggagagctttccaggcagagggaactgagcatgtAGACA----ATGAGTGGGAAGATGGCCACAGCAAAAACTGGGCAGTGGTGGGCACAG--GGGTGGAGGAAGAC--------AGTTGGGA-AGGGTAGTGG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 394373 235 + 643850 accagtattttcatagca-----cacggaaacccgtctagctcactctttattgagatggcttcccagaggaggtgatg-tctgggttagacatccaggatgagtacaaggaagccaggagagctttccaggcagagggaaccaaatgtgta--ttggcattgagaaggaaaatggcacacccaggaattgggcagtgttgggcaaaggtggagggtggaagaa--------agttgggagagaatggtgg i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 614096 628 + 2501019 I e micMur3.chr22 3998379 565 - 30143674 I a score=2022176.000000 s hg38.chr19_GL383574v1_alt 128829 193 + 155864 agagcca-tagtggattttaagcgc-agagtggtgtgatcacattgattctagagtagtcacacagcatcca-gaggggagtagcccaggcatttggaagatcactcaggaggcgcctccataattcaggcaggaggtaaaaacagt---agctttggtacggcagtga----agatagaaggaaaaggacttgagagatact s panTro5.chr19 36196446 193 + 61309027 agagcca-tagtggattttaagcgc-agagtggtgtgatcacattgactctagagtagtcacacagcatcca-gaggggagtagcccaggcatttggaagatcactcaggaggcgcctccataattcaggcaggaggtaaaaacagt---agctttggtacggcagtga----agatagaaggaaaaggacttgagagatact i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940668 193 + 64411610 agagcca-tagtggattttaagcgc-agagtggtgtgatcacattgactctagagtagtcacacagcatcca-gaggggagtagcccaggcatttggaagatcactcaggaggcgcctccataattcaggcaggaggtaaaaacagt---agctttggtacggcagtga----agatagaaggaaaaggacttgagagatact i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6352386 193 - 8369475 agagcca-tagtggattttaagcgc-agagtggtgtgatcacattgactctagagtagtcacacagcatcca-gaggggagtagcccaggcatttggaagatcactcaggaggcgcctccataattcaggcaggaggtaaaaacagt---agctttggtacgacagtga----agatagaaggaaaaggacttaagagatact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63949909 193 - 106955855 aaagcca-tagtggattttaagcgc-agagtggtgtgatcacattgactctagagtagtcacacagcatcca-gaggggagtagcccaggcatttggaagatcactcaggaggcgcctccataattcaggcaggaggtaaaaacagt---agctttgctacggcagtga----agatagaaggaaaaggtcttgagagatact i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30265259 188 + 53671032 agagcca-tagtggattttaagcac-agagtggtgtgatcacattgactctggag-----acacagcatccg-gaggggagtagcccaggcatttggaagatcactcaggaggtgcctctgtaattcagccagtaggtaaaaacagt---agccttggtacggcagtga----agatagaagggaaaggacttgagagatact i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34719177 188 + 59248254 agAGCCA-TAGTGGATTTTAAGCAC-AGAGTGGTGTgatcacattgactctggag-----acacagcatccg-gaggggagtagcccaggcatttggaagatcactcaggaggtgcctctgtaattcagccagtaggtaaaaacagt---agccttggtacggcagtga----agatagaagggaaaggacttgagagatact i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4591550 188 - 13342542 agAGCCA-TAGTGGATTTTAAGCAC-AGAGTGGTGTGATCACATTGACTCTGGAG-----ACACAGCATCCA-GAGGGGAGTAGCCCAGGCATTTggaagatcactcaggaggtgcctctgtaattcagccagtaggtaaaaacagt---agccttggtacggcagtga----agattgaagggaaaggacttgagagatact i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5515784 187 + 7714307 agAGCCA-TAGTGGATTTTAAGCAC-AGAGTGGTGTGATCACATTGACTCTGGAG-----ACACAGCATCCA-GAGGGGAGTAGCCCAGGCATTTggaagatcactcaggaggtgcctctgtaattcagccagggggt-aaaatagt---agccttagtacggcagtga----agatagaagggaaaggacttgagagatcct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29319427 188 + 50890351 agAGCCA-TAGTGGATTTTAAGCAC-AGAGTGGTGTgatcacattgactctggag-----acacagcatcca-gaggggagtagcccaggcatttggaagatcactcaagaggtgcctctgtaattcagccaggaggtaaaaacagt---agccttggtacggcagtga----agatagaagggaaaggacttgagagatact i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951756 187 - 2385121 agAGCCA-TAGTGGATTTTAAGCAC-AGAGTGGTGTGATCACATTGACTCTGGAG-----ACACAGCATCCA-GAGGGGAGTAGCCCAGGCATTTggaagatcactcaggaggtgcctctgtaattcagccaggaggt-aaaacagt---agccttagtacggcagtga----agatagaagggaaaggacttgagagatcct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393678 188 + 4274983 agagcca-tagtggattttaagcac-agagtgatgtgatcacattgactctggag-----acacagcatcca-gaggggagtagcccaggcatttggaagaccactcaggaggtgcctctgtaattcagccaggaggtaaaaacagt---agccttggtacggcagtga----agataaaagggaaaggacttgagagatact i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28604404 173 + 49145316 AGAGCCA-TAGTGGATTTTAAGCGC-AGAGTGGCATAATCAaattgactctagag---------------------gggagtagcccaggcatttagaaagtcactcaggaggcacctctgtaatttaggcaggaggtaaaaacagt---agctttggtatggcagtga----agatagaagggaaaggacttgagagatact i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5457415 171 + 8899380 AGAGCCA-TAGTGGATTTTAAGCGC---AGtgtcttgatcaaattgactctagag---------------------gggagtagcccaggcatttagaaggtcactcaggaggcacctctgtaatttaggcaggaggtagaaacagt---agctttggtatggcagtga----agatagaagggaaaggacttgagagatact i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1662389 170 - 2680843 agagcca-tagtggattttaagtgc-agagtggcgtgatcaaattgactctagag---------------------gggagtagcccagacatttag---gtcacttaggaggtacctctgtaatttaggcaggaggtaaaaacagt---agctttggtatggcagtga----agatagaagggaaagaatttgagagatact i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 408817 172 - 4471408 agAGCCA-TAGTGGATTTTAAGCGC-AGAGTGGCATGATCAAATTGACTCTA-AG---------------------GGGAGTAGCCCAGGCATTTAGAAGGTCACTCAGGAGGCACCTCTGTAATTTAGGCAGGAGGTAAAAACAGT---AGCTTTGGTGTGGCAGTGA----AGATAGAAGGGAAAGGACTTGAGAGATACT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5534296 196 + 5549422 agcacca-tagtggattttaagcaggagagtgatatgatcaaactggctctagaacatttacacagcaagtg-gtggggagtagtcaaggcatttggaagctcactcaggaggtgcctgtgtaatttaggcaagaggtgaagactgtctgaggtttgttatggcag-ga----aggtcaaaggaaagggccttgagaaatatt i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4657634 194 - 122678785 AGAGCCA-CA-CAGATGTTAAACAGGAGAGTAG-ATGATTAGATTGGCTCTAGAACAATCACACAGCAACCA-GAAGGGAGCAGTCCAGGAGTTTGGGAGGTTACTCAGTAGGCTCCTCTGTAATTCAAGAGGAAAG--AAGGTCTG---AACTTTGGATTGGCAGTGAACATAGAGAGAAGGAAAAAGACTTGAGAGATATC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 394608 117 + 643850 caagtcattaacacattttaagcaaaagagtagcatgattactttgaccttaaaacaaacacacagcagccaggaggggagcagctctggtatctggaagat-----------cacttacg-----------------------------agctcct---------------------------------------------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 614096 628 + 2501019 I e micMur3.chr22 3998379 565 - 30143674 I e mm10.chr7 111142000 5 - 145441459 I a score=33120.000000 s hg38.chr19_GL383574v1_alt 129022 3 + 155864 aag s panTro5.chr19 36196639 3 + 61309027 aag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940861 3 + 64411610 aag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6352579 3 - 8369475 aag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63950102 3 - 106955855 gag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30265447 3 + 53671032 aag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34719365 3 + 59248254 aag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4591738 3 - 13342542 aag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5515971 3 + 7714307 aag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29319615 3 + 50890351 aag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951943 3 - 2385121 aag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393866 3 + 4274983 acg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28604577 3 + 49145316 aag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5457586 3 + 8899380 aag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1662559 3 - 2680843 aag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 408989 3 - 4471408 AAG i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4657828 3 - 122678785 AAG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 614096 628 + 2501019 I e micMur3.chr22 3998379 565 - 30143674 I e dasNov3.JH563638 394725 0 + 643850 C e otoGar3.GL873654 5534492 0 + 5549422 C e mm10.chr7 111142000 5 - 145441459 I a score=452842.000000 s hg38.chr19_GL383574v1_alt 129025 48 + 155864 aaggcaggaaggggccgggcatggtggctcatacctgtaatcccagca s panTro5.chr19 36196642 48 + 61309027 aaggcaggaaggggccgggcacggtggctcatacctgtaatcccagca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940864 48 + 64411610 aaggcaggaaggggccgggcacggtggctcatacctgtaatcccagca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6352582 48 - 8369475 aaggcaggaaggggccgggcacggtggctcatacctgtaatcccagca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63950105 48 - 106955855 aaggcaggaaggggctgggcatggtggctcacacctgtaatcccagca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30265450 48 + 53671032 aaggcaggaagggggcgggcactgtggctcacgcctgtaatccctgca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34719368 48 + 59248254 aaggcaggaagggggcgggcactgtggctcacgcctgtaatccctgca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4591741 48 - 13342542 aaggcaggaagggggcgggcactgtggctcacgcctgtaatcccagca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5515974 48 + 7714307 aaggcaggaagggggcgggcactgtggctcacgcctgtaatcccagca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29319618 48 + 50890351 aaggcaggaagggggcgggcactgtggctcacgcctgtaatcccagca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951946 48 - 2385121 aaggcaggaagggggcgggcactgtggctcacgcctgtaatcccagca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393869 48 + 4274983 aaggcaggaagaggccgggcactgtggctcacgcctgtaatcccagca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28604580 48 + 49145316 aaggcagaaaggggccagatgcagtggctcacgcctgtaatcccagca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5457589 48 + 8899380 aaggcagaaagggaccagatgcagtggctcatgcctggaatcccagca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1662562 48 - 2680843 aaagcagaaaggggccggatggagtggttcatgcctgtaatcccagca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 408992 48 - 4471408 AAGGCAGAAAGGggccagatgcagtggctcacgcctgtaatcccagca i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 394725 14 + 643850 ----------------------------------ctgtaattcagaca i dasNov3.JH563638 C 0 I 43 e proCoq1.NW_012149263v1 614096 628 + 2501019 I e micMur3.chr22 3998379 565 - 30143674 I e otoGar3.GL873654 5534492 0 + 5549422 C e mm10.chr7 111142000 5 - 145441459 I e canFam3.chr1 4657831 0 - 122678785 C a score=1328428.000000 s hg38.chr19_GL383574v1_alt 129073 146 + 155864 ttttgggaggccgcggc-gggtg-gatcacctgaggttgggagttcgagatcagcctgaccaatatggagaaa-ccccgtctgta--ctaaaaatacaaaattagccgggtgttgtggtgtatgcctgtaatcccagctactcaggaggct s panTro5.chr19 36196690 146 + 61309027 ttttgggaggccgcggt-gggtg-gatcacctgaggttgggagttcgagaccagcctgaccaatatggagaaa-ccctgtctcta--ctaaaaatacaaaattagccgggcgttgtggtgtatgcctgtaatcccagctactcaggaggct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39940912 146 + 64411610 ttttgggaggccgcggt-gggtg-gatcacctgaggttgggagttcgagaccagcctgaccaatatggagaaa-ccctgtctcta--ctaaaaatacaaaattagccgggcgttgtggtgtatgcctgtaatcccagctactcaggaggct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6352630 146 - 8369475 ttttgggaggctgcggc-gggtg-gatcacctgaggttgggagttcgagaccagcctgaccaatatggagaaa-ccccgtctcta--ctaaaaatacaaaattagccgggcgttgtggtgtatgcctgtaatcccagctactcaggaggct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63950153 146 - 106955855 ttttgggaggccgcggc-aggtg-gatcacctgagatcaggagttcaagaccagcctgaccaatatggagaaa-ccccgtctcta--ctaaaaatacaaaattagccgggcgtcgtggtgcatgcctgtaatcccagctactcaggaggct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30265498 146 + 53671032 ctttgggaggctgaggc-aggcg-gatcaccttgggtcgggagttcgagaccagcctgaccaatatggagaaa-ccctgtatcta--ctaaaagtacaaaattagccaggcgtggtggtgcatgcgtgtaatcccagctactcgggaggct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34719416 146 + 59248254 ctttgggaggctgaggc-aggcg-gatcaccttgggtcgggagttcgagaccagcctgaccaatatggagaaa-ccctgtatcta--ctaaaagtacaaaattagccaggcgtggtggtgcatgcgtgtaatcccagctactcgggaggct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4591789 146 - 13342542 ctttgggaggctgaggc-aggcg-gatcaccttgggtcgggagttcgagaccagcctgaccaatatggagaaa-ccctgtatcta--ctaaaagtacaaaattagccaggcgtggtggtgcatgcgtgtaatcccagctactcgggaggct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5516022 146 + 7714307 ctttgggaggccgaggc-aggtg-gatcaccttgggtcgggagttcgagaccagcctgaccaatatggagaaa-ccctgtatcta--ctaaaagtacaaaattagccgggcatggtggtgcatgcctgtaatcccagctactcgggaggct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29319666 146 + 50890351 ctttgggaggccgaggc-aggcg-gatcaccttgggtcgggagttcgagaccagcctgaccaatatggagaaa-ccctgtgtcta--ctgaaagtacaaaattagccgtgcgtggtggtgcgtgcctgtaatcccagctactcgggaggct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 951994 148 - 2385121 ctttgggaggccgaggc-aggcg-gatcaccttgggtcgggagttcgagaccagcctgaccaatatggagaaa-ccctgtgtctcttctaaatgtacaaaattagccgggcatggtggtgcatgcctgtaatcccagctactcgggaggct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2393917 146 + 4274983 ctttgggaggccgaggc-gggcg-gatcatcttgggtcgggagttcgagaccagcctgaccaatatggagaaa-ccccgtatcta--ctaaaaatataaaattagccgggcatggtggtgcatgcctgtaatcccagctactcgggaggct i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28604628 148 + 49145316 ttttgggaggccaaggc-gggggcgcatacctgaggttaggagttcgagaccagcttgaccaatgtggagaaacccccatctcta--ctaaaaatacaaaattagctgggcgtggtgacacatgcctgtaatctcagctacttgggagact i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5457637 148 + 8899380 ctttgggaggccaaggc-ggggacgaatacctgaggttgggagttcaagaccagcttgaccaacgtggagaaacccccagctcta--ctaaaaatacaaaattagcagggcgtggtggcacatgcctttaatcccagctactcaggagact i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1662610 149 - 2680843 ctttgggaggctaaggcagggggcgaatacctgaggttgggagttggagaccagcttgaccaacgtggacaaacccccagctctg--ctaaaaatacaaaattggctgggcgtggtggcacatgcctgtaatcccagctactcgggagact i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 409040 148 - 4471408 ctttgggaggccaaggc-gggggcgaatacctgaggttgggagatcgagaccagcttgaccaacgtggggaaacccccatctcta--ctaaaaatacaaaattagctgggcgtggtggcacatgcctgtaatcccagctactcgggagact i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 614096 628 + 2501019 I e micMur3.chr22 3998379 565 - 30143674 I e dasNov3.JH563638 394739 43 + 643850 I e otoGar3.GL873654 5534492 0 + 5549422 C e mm10.chr7 111142000 5 - 145441459 I e canFam3.chr1 4657831 0 - 122678785 C a score=216152.000000 s hg38.chr19_GL383574v1_alt 129219 21 + 155864 gaggcaggagaatcgcttgaa s panTro5.chr19 36196836 21 + 61309027 gaggcaggagaatcgcttgaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39941058 21 + 64411610 gaggcaggagaatcgcttgaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6352776 21 - 8369475 gaggcaggagaatcgcttgaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63950299 21 - 106955855 gaggcaggagaatcgctcgaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30265644 21 + 53671032 gaggcaggagaatcgcttgaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34719562 21 + 59248254 gaggcaggagaatcgcttgaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4591935 21 - 13342542 gaggcaggagaatcgcttgaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5516168 21 + 7714307 gaggcaggagaatcgcttgac i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29319812 21 + 50890351 gaggcaggagaatcgcttgaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 952142 21 - 2385121 gaggcaggagaatcgcttgaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2394063 21 + 4274983 gaggcaggagaatcgcttgaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28604776 21 + 49145316 gggatgagagaatcatttgaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5457785 21 + 8899380 ggggcaagagaatcatttgaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1662759 21 - 2680843 ggggcaagagaatcatttgaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 409188 21 - 4471408 ggggcaagagaatcatttgaa i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4657831 20 - 122678785 GGAGCAGGAGGGTT-CCTGAA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 614096 628 + 2501019 I e micMur3.chr22 3998379 565 - 30143674 I e dasNov3.JH563638 394739 43 + 643850 I e otoGar3.GL873654 5534492 0 + 5549422 C e mm10.chr7 111142000 5 - 145441459 I a score=650575.000000 s hg38.chr19_GL383574v1_alt 129240 72 + 155864 cccaggaggcggaggttgcagtgagcttagatcgcaccattgcactccagtctgggcaactagagcgaaact s panTro5.chr19 36196857 72 + 61309027 cccaggaggcagaggttgcagtgagcttagatcgcaccattgcactccagtgtgggcaactagagtgaaact i panTro5.chr19 C 0 C 0 s panPan2.chr19 39941079 72 + 64411610 cccaggaggcggaggttgcagtgagcttagatcgcaccattgcactccagtgtgggcaactagagtgaaact i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6352797 72 - 8369475 cccaggaggcggaggttgcagtgagcttagatcgcaccattgcactccagtctgggcaactagagcgaaact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63950320 72 - 106955855 cccaggaggcggaggttgcagtgagctgagatcgcaccattgcactccaggctgggcaacaagagcgaaact i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30265665 72 + 53671032 cctgggaggcggaggttgcagtgagccgagatctcgctattgcactccagtctgggaaacaagagtgaaact i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34719583 72 + 59248254 cctgggaggcggaggttgcagtgagccgagatctcgctattgcactccagtctgggaaacaagagtgaaact i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4591956 72 - 13342542 cctgggaggcggaggttgcagtgagccgagatctcgctattgcactccagtctgggaaacaagagtgaaact i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5516189 72 + 7714307 cctgggaggcggaggttgcagtgagccgagatctcgctattgcactccagtctgggaaacaagagtgaaact i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29319833 72 + 50890351 cctgggaggcggaggttgcagtgagccgagatctcgctattgcactccagtctgggaaacaagagtgaaact i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 952163 72 - 2385121 cctgggaggcggaggttgcagtgagccgagatctcgctattgcactccagtctgggaaacaagagtgaaact i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2394084 72 + 4274983 cctgggaggcggaggttgcagtgagccgagatctcgctattgtactccagtctgggaaacaagagcgaaatt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28604797 72 + 49145316 cctgggaggcggaggttgcactgagttgagatgagcccattgcactccagcctgggcaacaacagcaaaact i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5457806 72 + 8899380 cctgggaggcagaagttgcactgagttgagatgagcccattgcactccagcctgggcaacaagagcaaaact i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1662780 72 - 2680843 cctgggaggcggaggttgcactgagttgagatgagcccattgcattccagcctgggcaacgagagcaaaact i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 409209 72 - 4471408 cctgggaggcagaggttgcactgagttgagatgagcccattgcactccagcctgggcaacaagagcaaaact i aotNan1.NW_018505377v1 C 0 I 1455 e proCoq1.NW_012149263v1 614096 628 + 2501019 I e micMur3.chr22 3998379 565 - 30143674 I e dasNov3.JH563638 394739 43 + 643850 I e otoGar3.GL873654 5534492 0 + 5549422 C e mm10.chr7 111142000 5 - 145441459 I e canFam3.chr1 4657851 0 - 122678785 C a score=23662.000000 s hg38.chr19_GL383574v1_alt 129312 7 + 155864 c-cgtctc------------------- s panTro5.chr19 36196929 7 + 61309027 c-cgtctc------------------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39941151 7 + 64411610 c-cgtctc------------------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6352869 7 - 8369475 c-cgtctc------------------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63950392 7 - 106955855 c-cgtctc------------------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30265737 7 + 53671032 c-catctc------------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34719655 7 + 59248254 c-catctc------------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4592028 7 - 13342542 c-catctc------------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5516261 7 + 7714307 c-catctc------------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29319905 8 + 50890351 cgcatctc------------------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 952235 7 - 2385121 c-catctc------------------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2394156 7 + 4274983 c-cgtctc------------------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28604869 17 + 49145316 t-catctc---------aaaaaaaaag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5457878 23 + 8899380 t-catctc---aaaaaaaaaaaaaaaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1662852 26 - 2680843 t-catctcaaaaaaaaaaaagaaaagg i cebCap1.NW_016107633v1 C 0 C 0 e proCoq1.NW_012149263v1 614096 628 + 2501019 I e micMur3.chr22 3998379 565 - 30143674 I e dasNov3.JH563638 394739 43 + 643850 I e otoGar3.GL873654 5534492 0 + 5549422 C e mm10.chr7 111142000 5 - 145441459 I e canFam3.chr1 4657851 0 - 122678785 C e aotNan1.NW_018505377v1 409281 1455 - 4471408 I a score=270013.000000 s hg38.chr19_GL383574v1_alt 129319 24 + 155864 aagaaggcaggaaggataaga--ct--g s panTro5.chr19 36196936 24 + 61309027 aagaaggcaggaaggataaga--ct--g i panTro5.chr19 C 0 C 0 s panPan2.chr19 39941158 24 + 64411610 aagaaggcaggaaggataaga--ct--g i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6352876 24 - 8369475 aagaaggcaggaaggataaga--ct--g i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63950399 26 - 106955855 aagaaggcaggaaggataagattct--g i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30265744 24 + 53671032 aagaaggcaggaaggataaga--ct--g i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34719662 24 + 59248254 aagaaggcaggaaggataaga--ct--g i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4592035 24 - 13342542 aagaaggcaggaaggataaga--ct--g i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5516268 24 + 7714307 aagaagtcaggaaggataaga--ct--g i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29319913 24 + 50890351 aagaaggcaggaaggataaga--ct--g i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 952242 24 - 2385121 aagaagtcaggaaggataaga--ct--g i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2394163 24 + 4274983 aagaaggcaggaaggataaga--ct--g i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28604886 26 + 49145316 aagaaggcaggaaggataaga--ctcca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5457901 26 + 8899380 aaaaaggcaggaaggataagt--ctcca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1662878 26 - 2680843 aagaaggcaggaaggataaga--ctcca i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3998944 26 - 30143674 aagaaggcaggaaggataaga--cttaa i micMur3.chr22 I 565 C 0 s proCoq1.NW_012149263v1 614724 26 + 2501019 aagaaggcaggaaggacaaga--cttaa i proCoq1.NW_012149263v1 I 628 C 0 s otoGar3.GL873654 5534492 26 + 5549422 aagaaacctggaagtgtaaga--cttag i otoGar3.GL873654 C 0 C 0 e dasNov3.JH563638 394739 43 + 643850 I e mm10.chr7 111142000 5 - 145441459 I e canFam3.chr1 4657851 0 - 122678785 C e aotNan1.NW_018505377v1 409281 1455 - 4471408 I a score=2970071.000000 s hg38.chr19_GL383574v1_alt 129343 227 + 155864 tgattaattggatgtgaaggagagtgaagagtagaggataactcccaggtttctgccttgttcaagtag-----gcagatgg---------------tgatgtcatttgccaagactgggaaggcatattgaaagacttggaagatttggttttggacttttgattttgggacctgtccac-taggcagttgaatatttgggttctggagcacaggacaaagatctgg----gctagagggatggatttggg s panTro5.chr19 36196960 227 + 61309027 tgattaattggatgtgaaggagagtgaagagtagaggataactcccaggtttctgccttgttcaagtag-----gcagatgg---------------tgatgtcatttgccaagactgggaaggcatattgaaagacttggaagatttggttttggacttttgattttgggacctgtccac-taggcagttgaatatttgggttctggagcacaggacaaagatctgg----gctagagggatggatttggg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39941182 227 + 64411610 tgattaattggatgtgaaggagagtgaagagtagaggataactcccaggtttctgccttgttcaagtag-----gcagatgg---------------tgatgtcatttgccaagactgggaaggcatattgaaagacttggaagatttggttttggacttttgattttgggacctgtccac-taggcagttgaatatttgggttctggagcacaggacaaagatctgg----gctagagggatggatttggg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6352900 227 - 8369475 tgattaattggatgtgaaggagagtgaagagtagaggataactcccaggtttctgccttgttcaaggag-----gcagatgg---------------tgatgtcatttgccaagactgggaaggcatattgaaagacttggaagatttggttttggacttttgattttgggacctgtccac-taggcagttgaatatttgggttctggagcacaggacaaagatctgg----gctagagggatggatttggg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63950425 227 - 106955855 tgattaattggatgtgaagcagagtgaggactagaggataactcccaggtttctgccttgttcaagtag-----gcagatgg---------------tgatgtcatttgccaagactgggaaggcatattgaaagacttgggagatttggttttggacttttgattttgggacctgtccac-taggcagttgaatatttgggttctggagcacaggacaaagatctgg----gctagagagatggatttggg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30265768 226 + 53671032 tgattaattggatgtgaaggagagtgaggagtagagg-taactcccaggtttctgccttgttcaagtag-----gcagatgg---------------tgatgtcatttgccaagactgggaaggcatattgaaaaacttgggaaatttggttttggacttttgactttgggacctgtccac-taggcagttgaatatttgggttctggagcacaggacaaagatctgg----gctagagagatggatttggg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34719686 226 + 59248254 tgattaattggatgtgaaggagagtgaggagtagagg-taactcccaggtttctgccttgttcaagtag-----gcagatgg---------------tgatgtcatttgccaagactgggaaggcatattgaaaaacttgggaaatttggttttggacttttgactttgggacctgtccac-taggcagttgaatatttgggttctggagcacaggacaaagatctgg----gctagagagatgaatttggg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4592059 226 - 13342542 tgattaattggatgtgaaggagagtgaggagtagagg-taactcccaggtttctgccttgttcaagtag-----gcagatgg---------------tgatgtcatttgccaagactgggaaggcatattgaaaaacttgggaaatttggttttggacttttgactttgggacctgtccac-taggcagttgaatatttgggttctggagcacaggacaaagatctgg----gctagagagatggatttggg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5516292 226 + 7714307 tgattaattggatgtgaaggagagtgaggagtagagg-taactcccaggtttctgccttgttcaagtag-----gcagatgg---------------tgatgtcatttgccaagactgggaaggcatattgaaagacttgggaaatttggttttggacttttgactttgggacctgtccac-taggcagttgaatatttgggttctggagcataggacaaagatctgg----gctagagacatggatttggg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29319937 226 + 50890351 tgattaattggatgtgaaggagagtgaggagtagagg-taactcccaggtttctgccttgttcaagtag-----gcagatgg---------------tgatgtcattttccaagactgggaaggcatatttaaagacttgggaaatttggttttggacttttgactttgggacctgtccac-taggcagttgaatatttgggttctggagcacaggacaaagatctgg----gctagagagatggatttggg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 952266 226 - 2385121 tgattaattggatgtgaaggagagtgaggagtagagg-taactcccaggtttctgccttgttcaagtag-----gcagatgg---------------tgatgtcatttgccaagactgggaaggcatattgaaagacttgggaaatttggttttggacttttgactttgggacctgtccac-taggcagttgaatatttgggttctggagcataggacaaagatctgg----gctagagacatggatttggg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2394187 226 + 4274983 tgattaattggatgtgaaggagagtgaggagtagagg-taactcccaggtttctgccttgttcaagtag-----gcagatgg---------------tgatgtcatttgccaagactgggaaggcatattgaaagacttgggaaatttggttttggatttttgactttgggtcctgtccac-taggcagttgaatatttgggttctggagcacaggacaaagatctgg----gctagagagatggatttggg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28604912 226 + 49145316 tgattaattggatgtgaaagagagtgagcagtagaagataactcccaggtttctaccttgttcaagtag-----gcagatgg---------------taatgccatttaccaagactgaaagggcacattgaaagacttgggacatttggttttggac-tttgattttgggacctgtttac-taggcagttaggtatttgggttctggaacacaggagaaagatctgg----gctagagagatggatttggg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5457927 219 + 8899380 tgattaatcggatgtgaaagagactgaggagtagaagataactcccaggtttctaccttgttcaagtag-----gcagatga---------------taatgccattttccaagactgaaaaggcatattgaaagacttgggacatttggttttggac-tttgattctgggacctgtccac-taggcagttaggtatt-------tggagcacaggacaaagatctgg----gctagagagatggatttggg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1662904 226 - 2680843 tgattaattggatgtgaaggagagtgaggagtagaagataactcccagatttctaccttgttcaagtag-----gcagatgg---------------taatgccatttgctaagactgagaaggcatattgaaagacttgggacatttggttttggac-tttgattttgggacctgtccac-taggcagttaaatatttgggttctggagcataggacaaagatctgg----gctagagagatggatttggg i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3998970 221 - 30143674 tgatggattggatgtgaaggagagtgaggagtgaagggtagctcttaggttcctgcattgttcaagtag-----gcagatgg---------------tgatacttttctctt----agggaaggaacactgaaagacttga--gacttggctttggacacttgatttggggacctgtccaataaggcagttg-----ttgggttctggagcacaggagaaagatctggtctagctagaaagatgggtttggg i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 614750 224 + 2501019 tgattggttggatgtgaaggagagtgagcagtaaaggataactcttaggttcctgcattgttcccatag-----gcagatgg---------------tgacacttttcacctagacaggaaaggaacactgaaagacttga--gacttggctttggatgtttgatgt-gggccctgtccagtaaggcagttg-----ttgggttctggagcacaggacaaagatctggtctagctagagagatgggtttggg i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5534518 222 + 5549422 tggttaattagatgtgaggcagagcgagaagtaggggacaactcctaggtttctgcagtgtttaagtag-----gcggaggg---------------tgacgctttttaccaagacaaggaaggaacactgaaaggcttgggtgacttggctgtgaacatttgatttggggacctgttcaa-gaggcagttg-----ttgggttctggagcacaggaggaagacctgg----actacagagatagatttggg i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4657851 234 - 122678785 TGATTAAGTGGCTGTAAAGGAGGGTGAGGAGTAGAGGATAACTACCAGTCTTCTG--GTGTACAGGTGGATGGTACAGGTGGATCAAGGGTTGGTCATTCTCCCAGTCACCAACATGGGAAAGGAAC---------CTCGGGAAGGTTGGTGATGGACCCTTGACTCAGGGACCtgtccag-taggcagttgaatatttgggatgtgtagcacagaagaaagatctgg----gctagag--atggatttagg i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 394782 198 + 643850 TGACTTATTGAATGGGAAGGAGAGTGAGGGGTAGAGG-------------------ATTGTTCAAATAG-----G----TGG---------------------CATTCACTAGTTCTGGGAAGGAACACTGAGACAATTGGGAGAGCTGGTGTTGTACATTTGATTtggggacttgtccag-tggacagttggacattcggggtctggagcaaatgagaacgatctgg----gtgagagagatggatttgga i dasNov3.JH563638 I 43 C 0 e mm10.chr7 111142000 5 - 145441459 I e aotNan1.NW_018505377v1 409281 1455 - 4471408 I a score=420703.000000 s hg38.chr19_GL383574v1_alt 129570 29 + 155864 aatcttcCCAGAAGGAATAT-GTTGCTCTT---- s panTro5.chr19 36197187 29 + 61309027 aatcttcCCAGAAGGAATAT-GTTGCTCTT---- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39941409 29 + 64411610 aatcttcCCAGAAGGAATAT-GTTGCTCTT---- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6353127 29 - 8369475 aatcttcCCAGAAGGAATAT-GTTGCTCTT---- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63950652 29 - 106955855 aatcttcCCAGAAGGAATAT-GTTGCTCTT---- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30265994 29 + 53671032 aatcttcCCAGAAGGAATAT-GTTGCTCTT---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34719912 29 + 59248254 aatcttcCCAGAAGGAATAT-GTTGCTCTT---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4592285 29 - 13342542 aatcttcCCAGAAGGAATAT-GTTGCTCTT---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5516518 29 + 7714307 aatcttcCCGGAAGGAATAT-GTTGCTCTT---- i cerAty1.NW_012005268v1 C 0 I 321 s chlSab2.chr6 29320163 29 + 50890351 aatcttcCCAGAAGGAATAT-GTTGCTCTT---- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 952492 29 - 2385121 aatcttcCCGGAAGGAATAT-GTTGCTCTT---- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2394413 29 + 4274983 aatcttcCCAGAAGGAATAT-GTTGCTCTT---- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28605138 29 + 49145316 gatcctcCCAGAAGGAATAT-GTTGCTCTT---- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5458146 29 + 8899380 gatcctcCCAGAAGGAATAT-GTTGCTCTT---- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1663130 29 - 2680843 gatcctcCCAGAAGGAATAT-GTTGCTCTT---- i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3999191 29 - 30143674 aatcctcCCAGGGAAAATAT-GTTGCTCTT---- i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 614974 28 + 2501019 aatcctcCCAGCG-AAGTAT-GTTGCTCTT---- i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5534740 28 + 5549422 aatcCTTCCGGGG-GAATGT-GTTGCTCTT---- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111142005 30 - 145441459 AATCTTCCCAAGGAGGATATGGTTGGTGAT---- i mm10.chr7 I 5 I 3 s canFam3.chr1 4658085 29 - 122678785 gatcctcCTAGGGAGAACAT-GTTGATCAT---- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 394980 33 + 643850 aatcctcCCAGGGAGAATAT-GTAGATCTATCTT i dasNov3.JH563638 C 0 C 0 e aotNan1.NW_018505377v1 409281 1455 - 4471408 I a score=144333.000000 s hg38.chr19_GL383574v1_alt 129599 10 + 155864 AGAAACAGAG s panTro5.chr19 36197216 10 + 61309027 AGAAACAGAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39941438 10 + 64411610 AGAAACAGAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6353156 10 - 8369475 AGAAACAGAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63950681 10 - 106955855 AGAAACAGAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30266023 10 + 53671032 AGAAACAGAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34719941 10 + 59248254 AGAAACAGAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4592314 10 - 13342542 AGAAACAGAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5516868 10 + 7714307 aGAAACAGAG i cerAty1.NW_012005268v1 I 321 C 0 s chlSab2.chr6 29320192 10 + 50890351 AGAAACAGAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 952521 10 - 2385121 AGAAACAGAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2394442 10 + 4274983 AGAAACAGAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28605167 10 + 49145316 AGAAATAGAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5458175 10 + 8899380 AGAAACAGAG i saiBol1.JH378197 C 0 I 315 s cebCap1.NW_016107633v1 1663159 10 - 2680843 AGAAACAGAG i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3999220 8 - 30143674 GGAAAC--AG i micMur3.chr22 C 0 I 21 s proCoq1.NW_012149263v1 615002 10 + 2501019 GGAAACAGAG i proCoq1.NW_012149263v1 C 0 I 21 s otoGar3.GL873654 5534768 6 + 5549422 GGAAAC---- i otoGar3.GL873654 C 0 I 19 s mm10.chr7 111142038 10 - 145441459 AGAAACAGCA i mm10.chr7 I 3 C 0 s canFam3.chr1 4658114 10 - 122678785 AGAAACAGAC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 395013 10 + 643850 ATAAACAGAG i dasNov3.JH563638 C 0 C 0 e aotNan1.NW_018505377v1 409281 1455 - 4471408 I a score=842591.000000 s hg38.chr19_GL383574v1_alt 129609 65 + 155864 AGGG--CATAGCA-----------------------CTTAAGGTCTATCAGAGGAGGAGTAGCTCAAA-GGGGCAACTAAGAATGGCCAGA s panTro5.chr19 36197226 65 + 61309027 AAGG--CACAGCA-----------------------CTTAAGGTCTATCAGAGGAGGAGTAGCTCAAA-GGGGCAACTAAGAATGGCCAGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39941448 65 + 64411610 AGGG--CACAGCA-----------------------CTTAAGGTCTATCAGAGGAGGAGTAGCTCAAA-GGGGCAACTAAGAATGGCCAGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6353166 63 - 8369475 AAGG--CACAGCA-----------------------CTTAAGGTCTATCAGAGGAG--ATAGCTCAAA-GGGGCAACTAAGAATGGCCAGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63950691 65 - 106955855 Aggg--cacagca-----------------------cttaaggtctgtcagaggaggagtagctcaaa-ggggcaactaagaatggccaga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30266033 65 + 53671032 AGGG--CACAACA-----------------------CGTAAGGTCTGTTAGAGGAGGAGTAGCTCAAA-GGGGCAACTAAGAATGGCCAGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34719951 65 + 59248254 Aggg--cacaaca-----------------------cttaaggtctgttagaggaggagtagctcaaa-ggggcaactaagaatggccaga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4592324 65 - 13342542 AGGG--CACAACA-----------------------CTTAAGGTCTGTTAGAGGAGGAGTAGCTCAAA-GGGGCAACTAAGAATGGCCAGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5516878 65 + 7714307 AGGG--CACAACA-----------------------CTTAAGGTCTGTTAGAGGAGGAGTAGCTCAAA-GGGGCAACTAAGAATGGCCAGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29320202 65 + 50890351 Aggg--cacaaca-----------------------cttaaggtctgttagaggaggagtagctcaaa-ggggcaactaagaatggccaga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 952531 65 - 2385121 AGGG--CACAACA-----------------------CTTAAGGTCTGTTAGAGGAGGAGTAGCTCAAA-GGGGCAACTAAGAATGGCCAGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2394452 65 + 4274983 AGGG--CACAACA-----------------------CTTAAGGTCTGTCAGAGGAGGAGTAGCTCAAA-GGGGCAACTAAGAATGGCCAGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28605177 63 + 49145316 --GG--CACAGCC-----------------------CTTAAGGTCTGTCAGAGGAGGAGTGGCTCAAA-GGGGCAACTAAGAATGGCCAGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5458500 65 + 8899380 AGGG--CACAGCA-----------------------CTTAAGGTCTGTCAGAGGAGGAGTGGCTCAAA-GGGGCAACTAAGAATGGCCAGA i saiBol1.JH378197 I 315 C 0 s cebCap1.NW_016107633v1 1663169 63 - 2680843 AGGG--CACAGCA-----------------------CTTAAGGTC--TCAGAGGAGGAGTGGCTCAAA-GGGGCAACTAAGAATGGCCAGA i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3999249 67 - 30143674 AGGAACCACGGCA-----------------------CTTATGGTCTGTCAGAGGAGGAGTGGCTCAAA-GGAGCAACTAAGAATGGTCAGA i micMur3.chr22 I 21 I 21 s proCoq1.NW_012149263v1 615033 66 + 2501019 AGGAACCACAGCA-----------------------CTTAGGGTCTATCAGAGGAGGAGTGGCTCAAA-GGGGCAAGTAAGAATGGTCAG- i proCoq1.NW_012149263v1 I 21 C 0 s otoGar3.GL873654 5534793 66 + 5549422 AGGAACCACAGCG-----------------------CTTCAGGTGTGTCAGAGGAGG-GTGCCTCACA-GCGGCAACTAAGAATGGTCAGA i otoGar3.GL873654 I 19 C 0 s mm10.chr7 111142048 37 - 145441459 ---------------------------------------AGGGTGCCCCACAGG--------CTCTGA-GGTGCA------GATGGCTGGA i mm10.chr7 C 0 C 0 s canFam3.chr1 4658124 84 - 122678785 AAAG--CACAGCATAGAGCTCTGGCTAACCATAGTGCTTCAGGTC----AGAGGAAGGGTGGTTCACA-GAGGCAACTGAGAATGGCCAGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 395023 82 + 643850 AGGG--CCCAGCATAGAGCTCTGAGGAAC-------CACAGCACTTGTCAGAGAAGAAGTATCTCAAATAAGGCAGCAACAAATGGCCAAA i dasNov3.JH563638 C 0 C 0 e aotNan1.NW_018505377v1 409281 1455 - 4471408 I a score=188210.000000 s hg38.chr19_GL383574v1_alt 129674 24 + 155864 GAGGTATGAGGAGAGCCAGCACTA s panTro5.chr19 36197291 23 + 61309027 GAGGTATGAGGAGAGCCAGCACT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39941513 23 + 64411610 GAGGTATGAGGAGAGCCAGCACT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6353229 23 - 8369475 GAGGTATGAGGAGAGCCAGCACT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63950756 23 - 106955855 gaggtatgaggagagccaGCACT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30266098 23 + 53671032 GAGGTATGAGGAGAGTCAGCACT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34720016 23 + 59248254 gaggtatgaggagagtcaGCACT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4592389 23 - 13342542 GAGGTATGAGGAGAGTCAGCACT- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5516943 23 + 7714307 GAGGTATGAGGAGAGCCAGCACT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29320267 23 + 50890351 gaggtatgaggagagccaGCACT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 952596 23 - 2385121 GAGGTATGAGGAGAGCCAGCACT- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2394517 23 + 4274983 GAGCTGTGAGGAGAGCCAGCACT- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28605240 20 + 49145316 GCAGT---AAGGGAGCCAGCGCT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5458565 20 + 8899380 GCGGT---AAGGGAGCCAGCGCT- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1663232 20 - 2680843 GCGGT---AAGGGAGCCAGCGCT- i cebCap1.NW_016107633v1 C 0 C 0 s proCoq1.NW_012149263v1 615099 22 + 2501019 GAGG-AAGAGGAGAGCTAGGAGG- i proCoq1.NW_012149263v1 C 0 I 3 s otoGar3.GL873654 5534859 18 + 5549422 -----GGTAGGCGAGCCGGGGGA- i otoGar3.GL873654 C 0 I 7 s mm10.chr7 111142085 21 - 145441459 --AGTAGGAGGAAAGTTAGGAGG- i mm10.chr7 C 0 I 1 s canFam3.chr1 4658208 23 - 122678785 GGGGCAGGAGTAGAGCTAGGAGG- i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 395105 20 + 643850 GAGCT---AGGATAACTAGCCTT- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3999316 21 - 30143674 I e aotNan1.NW_018505377v1 409281 1455 - 4471408 I a score=794496.000000 s hg38.chr19_GL383574v1_alt 129698 60 + 155864 AGCGTCTTTT------CGTGTTAGCAGCTTAC--AGAGTTGC-----TTC---------------------ACTTTGTAATGTGGTAACAGATA s panTro5.chr19 36197314 60 + 61309027 AGCGTCTTTT------CGTGTTAGCAGCTTAC--AGAGTTGC-----TTC---------------------ACTTTGTAATGTGGTAACAGATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39941536 60 + 64411610 AGCGTCTTTT------CGTGTTAGCAGCTTAC--AGAGTTGC-----TTC---------------------ACTTTGTAATGTGGTAACAGATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6353252 60 - 8369475 AGCATCTTTT------CGTGTTAGCAGCTTAC--AGAGTTGC-----CTT---------------------ACTTTGTAATGTGGTAACAGATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63950779 60 - 106955855 AGTGTCTTTT------CGTGTTAGCAACTTAC--AGAGTTGC-----TCC---------------------ACTTTGTAATGTGGTAACAGATA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30266121 60 + 53671032 AGCGTCTTTT------TGTGTTAGCAACCTAC--AGAGTTGC-----TTC---------------------ACTTTGTAATGTGGTAACAGATA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34720039 60 + 59248254 AGCGTCTTTT------TGTGTTAGCAACCTAC--AGAGTTGC-----TTC---------------------ACTTTGTAATGTGGTAACAGATA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4592412 60 - 13342542 AGCGTCTTTT------TGTGTTAGCAACCTAC--AGAGTTGC-----TTC---------------------ACTTTGTAATGTGGTAACAGATA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5516966 60 + 7714307 AGCGTCTTTT------TGGGTTAGCAACCTAC--AGAGTTGC-----TTC---------------------ACTTTGTAATGTGGTAACAGATA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29320290 60 + 50890351 AGCGTCTTTT------TGTGTTAGCAACCTAC--AGAGTTGC-----TTC---------------------ACTTTGTAATGTGGTAACAGATA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 952619 60 - 2385121 AGCGTCTTTT------TGGGTTAGCAACCTAC--AGAGTTGC-----TTC---------------------ACTTTGTAATGTGGTAACAGATA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2394540 60 + 4274983 AGCGTCTTTT------TGTGTTAGCAACCTAC--AGAGTCGC-----TTC---------------------ACTTTGTAATGTGGTAACAGATA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28605260 60 + 49145316 AGCATCTTTT------CATGCTAGCAGCCTAC--AGAGTTGC-----TTC---------------------ACTTTGTAATGTGGTGACAGAGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5458585 60 + 8899380 AGCATCTTTC------CATGCTAGCAGCCTAC--AGAGTTGC-----TTC---------------------ACTTTGTAATGCGGTGACAGATA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1663252 62 - 2680843 AGCGTCTTTT------CATGCTAGCAGCCTACAGAGAGTTGC-----TTT---------------------ACTTTGTAATGTGGTGACAGATA i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3999337 60 - 30143674 AGCATCTTTT------CATAGTAGCAACCTAT--AGAGTTGC-----TTC---------------------ACTTTTTAATGTGGTAACTGATA i micMur3.chr22 I 21 C 0 s proCoq1.NW_012149263v1 615124 60 + 2501019 AGCATCTTTT------CATATTAGCGACCTGT--AGAGTTGC-----TTC---------------------ATTTTTTAATGTGGTAACAGATA i proCoq1.NW_012149263v1 I 3 C 0 s otoGar3.GL873654 5534884 56 + 5549422 ----TCTTTT------CTTATCAGCAACTTAC--AAAGTTGC-----TTC---------------------ATTTTTTAATGTGGTAACAGATA i otoGar3.GL873654 I 7 C 0 s mm10.chr7 111142107 43 - 145441459 ----------------CATGT-------CTAC--CAGAGAGC-----TTC---------------------ACTTTTAGATGTGGTCACAGATA i mm10.chr7 I 1 C 0 s canFam3.chr1 4658234 54 - 122678785 AGCATCTTCC-----------------CTTAC--AGAATTGCCCCCACTC---------------------TCTTTTTAGTTTGATAACATATA i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 395125 82 + 643850 ----TTTTTTCCCTCCCATTTCAGCA-CCTAC--AGAGTTGC-----TTCAGTCTTTTTTTTTTTTTTTTTACtttttattgtggtagcatata i dasNov3.JH563638 C 0 I 198 e aotNan1.NW_018505377v1 409281 1455 - 4471408 I a score=5721212.000000 s hg38.chr19_GL383574v1_alt 129758 358 + 155864 GAGGGAGCT-AAAA-AAGTAGAGTTCTAAGG--AACG-TCCGAGCAAAGCACTGAAT-TTTCCAGGCA-TTTTCTCTTGCCTGGATAGATATTTTAAATTTATGAATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTAGAGTGCATTTCTAAATACGGTTTGAGTCAGTCTGAACTGACTAAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAGATATTTGGATTTGCATTTTTGTGGATTG---GAGAGGAC-----AGAACATTTTC-TGTG--------------TTT-----T----TTTTTTTTTCCTC--------AGAAGAGGGAATTGTTT s panTro5.chr19 36197374 362 + 61309027 AAGGGAGCT-AAAA-AAGTAGAGTTCTAAGG--AAGG-TCCGAGCAAAGCACTGAAT-TTTCCAGGCA-TTTTCTCTTGCCTGGATAGATATTTTAAATTTATGAATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTAGAGTGCATTTCTAAATACGGTTTGAGTCAGTCTGAACTGACTAAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAGATATTTGGATTTACATTTTTGTGGATTG---GAGAGGAC-----AGAACAttttc-tgtg--------------ttt-----ttttcttttttttttCTC--------AGAAGAGGGAATTGTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39941596 360 + 64411610 AAGGGAGCT-AAAA-AAGTAGAGTTCTAAGG--AAGG-TCCGAGCAAAGCACTGAAT-TTTCCAGGCA-TTTTCTCTTGCCTGGATAGATATTTTAAATTTATGAATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTAGAGTGCATTTCTAAATACGGTTTGAGTCAGTCTGAACTGACTAAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAGATATTTGGATTTACATTTTTGTGGATTG---GAGAGGAC-----AGAACATTTTC-TGTG--------------TTT-----TTT--CTTTTTTTTTCTC--------AGAAGAGGGAATTGTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6353312 361 - 8369475 AAGGGAGCT-AAAA-AAGTAGAGTTCTAAGG--AAGG-TCCGAGCAAAGCACTGAAT-TTTCCAGGCA-TTTTCTCTTGCCTGGATAGATATTTTAAATTTATGAATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTAGAGTGCATTTCTAAATACGGTTTGAGTCAGTCTGAACTGACTAAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAGATATTTGGATTTACATTTTTGTGGATTG---GAGAGGAC-----AGAACATTTTC-TGTG--------------GTT-----TTTT-TTTTTTTTTCCTC--------AGAAGAGGGAATTGTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63950839 359 - 106955855 AAGGGAGCT-AAAA-AAGTAGAGTTCTAAGG--AAGG-TCCGAGCAAAGCACTGAAT-TTTCCAGGCA-TTTTCTTTTGCCTGGATAGGTATTTTAAATTTATCAATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTAGAGTGCATTTCTAAATATGGTTTGAGTCAGTCTGAACTGACTAAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAGATATTTGGATTTACATTTTTGTGGATTG---GAGAGGAC-----AGAACAttttc-tgtt--------------tgt-----tt---ttttttttttCTC--------AGAAGAGGGAATTGTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30266181 355 + 53671032 AAGGGAGCTAAAAA-AAGTAGAGTTCTAAGG--AAGG-TCCGAGCAAAGCACTGAAT-TTTCCAGGCA-TTTTCTCTTGCCTGGATAGATATTTTAAATTTATGAATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTAGAGTGCATTTCTAAATATGGTTTGAGTCAGTCTGAACTGACTAAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAGATATTTGGGTTTACATTTTTGTGGATTG---GAGAGGAC-----TGAACATTTTC-TGTG---------------------------TTTTTTTTTTCTT--------AGAAGAGGGAATTGTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34720099 355 + 59248254 AAGGGAGCT-AAAA-AAGTAGAGTTCTAAGG--AAGG-TCCGAGCAAAGCACTGAAT-TTTCCAGGCA-TTTTCTCTTGCCTGGATAGATATTTTAAATTTATGAATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTAGAGTGCATTTCTAAATATGGTTTGAGTCAGTCTGAACTGACTAAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAGATATTTGGGTTTACATTTTTGTGGATTG---GAGAGGAC-----TGAACATTTTC-TGTG------------------------T--TTTTTTTTTTCTT--------AGAAGAGGGAATTGTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4592472 355 - 13342542 AAGGGAGCT-AAAA-AAGTAGAGTTCTAAGG--AAGG-TCCGAGCAAAGCACTGAAT-TTTCCAGGCA-TTTTCTCTTGCCTGGATAGATATTTTAAATTTATGAATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTAGAGTGCATTTCTAAATATGGTTTGAGTCAGTCTGAACTGACTAAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAGATATTTGGGTTTACATTTTTGTGGATTG---GAGAGGAC-----TGAACATTTTC-TGTG------------------------T--TTTTTTTTTTCTT--------AGAAGAGGGAATTGTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5517026 360 + 7714307 AAGGGCGCT-AAAA-AAGTAGAGTTCTAAGG--AAGG-TCCAAGCAAAGCACTGAAT-TTTCCAGGCA-TTTTCTCTTGCCTGGATAGATATTTTAAATTTATGAATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTAGAGTGCATTTCTAAATATGGTTTGAGTCAGTCTGAACTGACTAAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAGATATTTGGATTTACATTTTTGTGGATTG---GAGAGGAC-----TGAACAttttc-tgtg--------------ttt-----ttt--ttttttttttctt--------AGAAGAGAGAATTGTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29320350 354 + 50890351 AAGGGAGCT-AAAA-AAGTAGAGTTCTAAGG--AAGG-TCCGAGCAAAGCACTGAAT-TTTCCAGGCA-TTTTCTCTTGCCTGGATAGATATTTTAAATTTATGAATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTAGAGTGCATTTCTAAATATGGTTTGAGTCAGTCTGAACTGACTAAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAGATATTTGGATTTACATTTTTGTGGATTG---GAGAGGAC-----TGAACATTTTC-TGTG---------------------------TTTTTTTTTTCTT--------AGAAGAGGGAATTGTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 952679 357 - 2385121 AAGGGCGCT-AAAA-AAGTAGAGTTCTAAGG--AAGG-TCTGAGCAAAGCACTGAAT-TTTCCAGGCA-TTTTCTCTTGCCTGGATAGATATTTTAAATTTATGAATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTAGAGTGCATTTCTAAATATGGTTTGAGTCAGTCTGAACTGACTAAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAGATATTTGGATTTACATTTTTGTGGATTG---GAGAGGAG-----TGAATATTTTC-TGTG----------------------TTT--TTTTTTTTTTCTT--------AGAAGAGGGAATTGTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2394600 374 + 4274983 ATGGGAGCT-AAAA-AAGTAGAGTTCTAAGG--AAGG-TCCGAGCAAAGCACTGAAT-TTTCCAGGCG-TTTTCTCTTGCCTGGATAGATATTTTAAATTTATGAATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTAGAGTGCATTTCTAAATATGGTTTGAGTCAGTCTGAACTGACTAAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAGATATTTGGATTTACATTTTTGTGGATTG---GAGAGGAC-----AGAACATTTTC-tgtgtgtgtgtgtgtgtgtgt-----gtg--tgtgtTTTTTCTC--------AGAAGAGGGAATTGTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28605320 360 + 49145316 AAGGGAGCC-AAAC-AAGTAGAGTTCTAAGG--AGGG-TCCGAGCAAAGCACTGAAT-TTTCCAGGCATTTTTCTCTTGCCTGGATAGATACTTTAAATTTATGAATGTTGAGGATAAAATTCTTCAAAGCATTTTTCTAGAATGCATTTCTAAATATGGTTTGAGTCAGTCTGAACTGACTAAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAGATATTTGGATTTACATTTTTGTGGATTG---GAGAGGAC-----AGAACATTTTC-TGTG--------------TGT-----TT---TTTTTTTTTTCTC--------GGAAGAGGGAATTGTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5458645 362 + 8899380 AAGGGAGCC-AAAA-AAGTAGAGTTCTAAGG--AGGG-TCCGAGCAAAGCACTGAAT-TTTCCAGACATTTTTCTCTTGCCTGGATAGATACTTTAAATTTATGAATGTTGAGAGTAAAATTCTTCAAAGCATTTTTCTAGAATGCATTTCTAAATATGGTTTGAGTCAGTCTGAACTGACTAAAAACATGGAAGTGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAGATATTTGGATTTACATTTTTGTGGATTG---GAGAGGAC-----AGAACATTTTC-TGTG--------------GTT-----TT---TTTTTTTTTCCCCTT------AGAAGAGGGAATTGTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1663314 368 - 2680843 AAGGGAGCC-AAAA-AAGTAGAGTTCTAAGG--AGGG-TCCGAGCAAAGCACTGAAT-TTTCCAGACATTTTTCTCTTGCCTGGATAGATACTTTAAATTTATGAATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTAGAATGCATTTCTAAATATGGTTTGAGTCCGTCTGAACTGACTAAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAGATATTTGGATTTACATTTTTGTGGATTG---GAGAGGAC-----AGAACAttttc-tgtg--------------ttt-----tt---ttttttttttttttttttCTCAGAAGAGGGAATTGTTT i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3999397 360 - 30143674 AAGGGAGGC-AAAA-AAGTAGAGTTCTAAGG--AGGG--AAGAACAGAGGACTGAAT-CTTTGAGGCA-TTTTCTCTTGCCTGGGTAGATATTTTAAATTTATGGATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTGGTGTGCATTTCTAAATATGGTTTGTGTCAGTCTGAACTGACTCAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACTTTATCAAGGGTAAATATTTGGGTTTACATTTTTGTGGATTG---GAAAGGAT-----AGAACAttttc-tgtg-------------tttt-----ttt--ttttttttttCTC--------TGAAGAGGGACTTGTTT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 615184 354 + 2501019 AAGGGAGCC-AAAA-AGGTAGAGTTCTAAGG--AAGG--AAGAACAGAGGACTGAAT-CTTTCAGGCA-TTTTCTCTTGCCTGGGTAGATATTTTAAATTTATGGATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTGGAGTGCATTTCTAAATATGGTTTGTGTCAGTCTGAACTGACTCAAAACATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTAATCTGCCTAAAGAATTTCCTGTAGTGTCTCCACATTATCAAGGGTAAATATTTGGGTTTACATTTTTGTGGATTG---GAGAGGAT-----AGAACATTTTC-TG------------------------TTT--TTTTTTTTTTCTC--------TGAAGAGGGACTTGTTT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5534940 353 + 5549422 AAGGGATCC-AAAA-AAGTAGAGTCCTAAGG--AGGAACAGAAACAAAGGACTAAAT-CTTTCAGGCA-TTTTCTCTTGCCTGGATAGATATTTTAAATTTATGAATGCTGAGAACAAAATTCTTCAAAGCATTTTTCTGTAATGCATTTCTAAATATGGTTTGTGTCAGTCTGAACTGACTAAAAATATGGAAATGGTTGGGCTTTGAACTT-CATAGACAATAACTTCACTCATCTGCCGAAAGAATTTCCTGTAGTGTCTCCACATTATCGAGGGTAGATATTTGAGTTTACATTTTTGTGGATTG---GAGAGGGT-----AGAACATTTTC-TG-----------------------------TGTTTTTTTCCTC--------TGAAGAGGAAATTGTTT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111142150 371 - 145441459 AGAGGAGCC-AAAAGAAAGCTGGTATTAAGG--AGGG--ATAGACTAAGGACTGGATCTTTTAAGGTT-TCTCCTCTTGCCTAGATGGATATTTTAAATTTATGATTGTTGAGAGTAAAAGTTTTCAAAGCATTTTTCTGGAGCTCATTTCTAAATATGGTTTGTGTCAGTCTGA----ACTAAAAACATGGAAGTGGTTGGGCTTTGAACTTCCATAGACAATGACTTAACTAATCTGCCTAAGGAATTTCCTGCAGTGTCTCTGTATTAGCCAGGGGAAATGTTTGGGTTT-TGCTCCTGGGGTTGGGGTGGGAGGACAATAGAGAACATTGCAGTGTG--------------CTTACAAGTTA--TTTTCCCTCTTTT--------AGAAGAAGGAATTGTCT i mm10.chr7 C 0 I 1573 s canFam3.chr1 4658288 343 - 122678785 AGGGGAGCC-AAA--AAGTAGAGTCCTAGGGCTAAGA----GAACAAAGAACTAAAT-CTTTCAGACA-TTTTCTCTTGCCTGGATAGATATTTTACATTCATGAATGTTGAGAATAAAATTCTTCAAAGCATTTTTCTGGAGTGTATTTCTAAATATGGCTTGTGTCATTCTGAACTGACAAAAAACATGGAAACGGTTGGGCTTTGAACTT-CACAGACAATAACTTCACTAATCTCCCTAAAGAATTTCCTGTGACGTCTCCATATTATCAAGGGTAGA--TTTAGATTTACATTGTTGCAGACTG---GAGGGAGA-----AAAA--------AAAA---------------------------TTTTTTTTTTTCC--------TGAAGAGGGAATTGTTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 395405 341 + 643850 AAGGGATCC-AAAA-AAGTAGAGTTCTAGGG--AGAG-----AACAAAGGACTGAAT-CTTTCAAGCA-TTTTCTCTTGCAT-GATAGGAATTTTAAATTCATGAATGTTGAGAATAAAATTCTTCAAAGCATTTTTGTGGACTGCATCTCTAAATATGGCTTGTGTCATTCTGAACTGACTAAAACCACAGAAATAGATGAGTTTTGTACTT-CATAGACAATAACTTCACTAATCTGCCAAAAGAATTTCCTGTAACGTCTCTGCATGATCAAGGGTAGA--------TTTACATTTTTATAGACTG---GAGAGGAG-----AGAAAATTTTT-GGTA---------------------------TTTTTTTTTTCTC--------CGAAGAGAGACTTGTTT i dasNov3.JH563638 I 198 C 0 e aotNan1.NW_018505377v1 409281 1455 - 4471408 I a score=631663.000000 s hg38.chr19_GL383574v1_alt 130116 46 + 155864 A---GGAATGATTC-ATCTTTATATTTTTTGtaacagctttattgaaata s panTro5.chr19 36197736 46 + 61309027 A---GGAATGATTC-ATCTTTATATTTTTTGtaacagctttattgaaata i panTro5.chr19 C 0 C 0 s panPan2.chr19 39941956 46 + 64411610 A---GGAATGATTC-ATCTTTATATTTTTTGtaacagctttattgaaata i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6353673 46 - 8369475 A---GGAATGATTC-ATCTTTATATTTTTTGtaacggctttattgaaata i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63951198 46 - 106955855 A---GGAATGATTC-ATCTTTATATTTTTCGtaacagctttattgaaata i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30266536 46 + 53671032 A---GGAATGATTC-ATCTTTATATTTTTTGtaacagttttattgaaata i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34720454 46 + 59248254 A---GGAATGATTC-ATCTTTATATTTTTTGtaacagttttattgaaata i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4592827 46 - 13342542 A---GGAATGATTC-ATCTTTATATTTTTTGtaacagttttattgaaata i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5517386 46 + 7714307 A---GGAATGATTC-ATCTTTATATTTTTTGtaacagttttattgaaata i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29320704 46 + 50890351 A---GGAATGATTC-ATCTTTATATTTTTTGtaacagttttattgaaata i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 953036 46 - 2385121 A---GGAATGATTC-ATCTTTATATTTTTTGtaacagttttattgaaata i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2394974 46 + 4274983 A---GGAATGATTC-ATCTTTATATTTTTTGtaacagttttattgaaata i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28605680 46 + 49145316 A---GGAATGATTC-ATCTTCATATTttttgtagcagctttattgaaata i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5459007 46 + 8899380 A---GGAATGATTC-ATCTCCATATTTTTTGtagcagctttattgaaata i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1663682 46 - 2680843 A---GGAATGATTC-ATCTTCATATTttttgtagtagctttattgaaata i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3999757 47 - 30143674 AT--GGAGTGATTC-ATCTTTTTATTTTGTGtaacagctttattgaaata i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 615538 47 + 2501019 AT--GGAGTGATTC-ATCTTTATATTTTGTGTAACAGTTTTATTGAAATA i proCoq1.NW_012149263v1 C 0 I 1990 s otoGar3.GL873654 5535293 47 + 5549422 AC--CAAGTAATTC-ATGTTTATATTTTTTataacagctttattgaaata i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4658631 46 - 122678785 -AT-GGAGTAGTTC-ATCTTTATATTTTTTG-aacagctttattgagata i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 395746 45 + 643850 --GTGGACTGTTTCTTTCTCTATATTTTT---AAAAtttttattgtggta i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111142521 1573 - 145441459 I e aotNan1.NW_018505377v1 409281 1455 - 4471408 I a score=179711.000000 s hg38.chr19_GL383574v1_alt 130162 16 + 155864 taattc----acataccata s panTro5.chr19 36197782 16 + 61309027 taattc----acataccata i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942002 16 + 64411610 taattc----acataccata i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6353719 16 - 8369475 taattc----acataccata i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63951244 16 - 106955855 taattc----acgtatcata i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30266582 16 + 53671032 taattc----acataccata i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34720500 16 + 59248254 taattc----acataccata i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4592873 16 - 13342542 taattc----acataccata i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5517432 16 + 7714307 taattc----acataccata i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29320750 16 + 50890351 taattc----acataccata i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 953082 16 - 2385121 taattc----acataccata i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2395020 16 + 4274983 taattc----acataccata i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28605726 20 + 49145316 taattcacatacatactata i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5459053 16 + 8899380 taattc----acatactgta i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1663728 16 - 2680843 taattc----acatactata i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 3999804 16 - 30143674 taattc----acataccata i micMur3.chr22 C 0 I 2539 s otoGar3.GL873654 5535340 12 + 5549422 taattc----acatac---- i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4658677 16 - 122678785 taactc----atatatcata i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 395791 13 + 643850 --acat----gcataacaa- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e mm10.chr7 111142521 1573 - 145441459 I e aotNan1.NW_018505377v1 409281 1455 - 4471408 I a score=155522.000000 s hg38.chr19_GL383574v1_alt 130178 15 + 155864 cagtttatccattta s panTro5.chr19 36197798 15 + 61309027 cagtttatccattta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942018 15 + 64411610 cagtttatccattta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6353735 15 - 8369475 cagttcatccattta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63951260 15 - 106955855 cagtttacccattta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30266598 15 + 53671032 cagtttacccattta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34720516 15 + 59248254 cagtttacccattta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4592889 15 - 13342542 cagtttacccattta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5517448 15 + 7714307 cagtttacccattta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29320766 15 + 50890351 cagtttacccattta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 953098 15 - 2385121 cagtttacccattta i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2395036 15 + 4274983 cagtttacccattta i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28605746 15 + 49145316 tagtttacccattta i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5459069 15 + 8899380 tagtttacccattta i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1663744 15 - 2680843 tagtttacccattta i cebCap1.NW_016107633v1 C 0 I 1049 s canFam3.chr1 4658693 15 - 122678785 caattcacccatgta i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 395804 15 + 643850 aattttaacttttta i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5535352 0 + 5549422 C e mm10.chr7 111142521 1573 - 145441459 I e aotNan1.NW_018505377v1 409281 1455 - 4471408 I a score=1231323.000000 s hg38.chr19_GL383574v1_alt 130193 157 + 155864 -------aagtatataaattggtggtttttagtatgttcata---gttatgca--------accatcatcaatt-ttagaatattttcatcactctg-caaataaaccatatacccatt-agcagtcatcccttattt-ccc-ccattccacacccccacccccagccttaggcaaccat- s panTro5.chr19 36197813 157 + 61309027 -------aagtatataaattggtggtttttagtatattcata---gttatgca--------accatcatcaatt-ttagaatattttcatcactctg-caaataaaccatatacccatt-agctgtcatcccttattt-ccc-ccattccacacccccacccccagccttaggcaaccat- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942033 157 + 64411610 -------aagtatataaattggtggtttttagtatattcata---gttatgca--------accatcatcaatt-ttagaatattttcatcactctg-caaataaaccatatacccatt-agctgtcatcccttattt-ccc-ccattccacacccccacccccagccttaggcaaccat- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6353750 157 - 8369475 -------aagtatataaattggtggtttttagtatattcata---gttatgca--------accatcatcaatt-ttagaatattttcatcactctg-caaataaaccatatacccatt-agcagtcatcccttattt-ccc-ccattccacacccccacccccagccttaggcaaccat- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63951275 157 - 106955855 -------aagtatataaattggtggtttttagtgtattcata---gttatgca--------accaccatcactt-ttagaatattttcatcactctg-caaataaaccatatacccatt-agcagtcatcgcttatttcccc-ccattccacacccccacccccagcc-taggcaacgat- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30266613 152 + 53671032 -------aagtatataaattggtggtttttagtgtattcata--------gca--------accatcaccaatt-ttagaatattttcatcactctg-caaataaaccatatacccatt-agcagtcatcccttattt-tcc-ccattccacacccccacccccagccttaggcaaccat- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34720531 152 + 59248254 -------aagtatataaattggtggtttttagtgtattcata--------gca--------accatcaccaatt-ttagaatattttcatcactctg-caaataaaccatatacccatt-agcagtcatcccttattt-tcc-ccattccacacccccacccccagccttaggcaaccat- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4592904 152 - 13342542 -------aagtatataaattggtggtttttagtgtattcata--------gca--------accatcaccaatt-ttagaatattttcatcactctg-caaataaaacatatacccatt-agcagtcatcccttattt-tcc-ccattccacacccccacccccagccttaggcaaccat- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5517463 152 + 7714307 -------aagtatataaattggtggtttttagtgtattcata--------gca--------accatcaccaatt-ttagaatattttcatcactctg-caaataaaccatatacccatt-agcagtcatcccttattt-ccc-ccattccacacccccacccccagccttaggcaaccat- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29320781 152 + 50890351 -------aagtatataaattggtggtttttagtgtattcaca--------gca--------accatcaccaatt-ttagaattttttcatcactctg-caaataaaccatatacccatt-agcagtcatcccttattt-ccc-ccattccacacccccacccccagccttaggcaaccat- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 953113 152 - 2385121 -------aagtatataaattggtggtttttagtgtattcata--------gca--------accatcaccaatt-ttagaatattttcatcactctg-caaataaaccatatacccatt-agcagtcatcccttattt-ccc-ccattccacacccccacccccagccttaggcaaccat- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2395051 149 + 4274983 -------aagtatataaattggtggtttttagtgtattcgta--------gca--------accatcaccaatt-ttagaatattttcatcactctg-caaataaaccatatacccatt-agcag---tcccttattt-ccc-ctattccacacccccacccctagccttaggcaaccat- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28605761 155 + 49145316 -------aagtatatgaatcaattgtttttagtatattc--a---gttatgca--------accatcactaatt-ttagaacattttcatcactctg-caaataaaccatatacccatt-agcagtcattccttattt-ccc-ccattccacacccccacccccagccttaggcaagcat- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5459084 157 + 8899380 -------aagtatataaatcaatggtttttagtatattcaga---gttatgca--------accatcaccaatt-ttagaacattttcatcactctg-caaataaaccatatacccatt-agcagtcattccttattt-ccc-ccattccacacccccacccccagcctcaggcaaccgt- i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5535352 120 + 5549422 -----------atataatt--gcccttttttgtttgttt---------------------------------tt-ttgggatagagtc-ttgttctgtcatctaggctgtgtacaggag-cacaatcatagctcattg-----------cagcctctagctcctgggctcaagcaatcct- i otoGar3.GL873654 C 0 I 193 s canFam3.chr1 4658708 150 - 122678785 -------aagtatatgattcagtgatttatagtgtattcaga---atcctaca--gacaacaccacaatcaatt-ttagaacatttttctcactcca-gaaagaaaccctgaacctgtt-agcagtcattccccattc-ttc-tcag---------ccacccct-gccctaggtaac---- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 395819 172 + 643850 actactttcatgtaccattcagtgatactaattactgtgataaatatgatgcgctgtcatcaccaccatccattaccaaaacatttttatcatcc---caaacaaactctgtacccattaaacaataactctccatct-ccctttatcccatgcc----tgcccagtccctgataac-atg i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e mm10.chr7 111142521 1573 - 145441459 I e aotNan1.NW_018505377v1 409281 1455 - 4471408 I e cebCap1.NW_016107633v1 1663759 1049 - 2680843 I a score=471380.000000 s hg38.chr19_GL383574v1_alt 130350 65 + 155864 taattgactttttgtttcaatggatttacgtaattggtacagttcatattaagg--gaac-------------------tttgggt s panTro5.chr19 36197970 65 + 61309027 taattgactttttgtttcaatggatttacgtaattggtacagttcatattaagg--gaac-------------------cttgggt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942190 65 + 64411610 taattgactttttgtttcaatggatttacgtaattggtacagttgatattaagg--gaac-------------------cttgggt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6353907 65 - 8369475 taattgactttttgtttcaatggatttacgtaattggtacagttcatattaagg--gaac-------------------tttgggt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63951432 65 - 106955855 taattgactttttgtttcaatggatttatgtaattggtacagttcatattaagg--gaac-------------------tttgggt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30266765 77 + 53671032 taattgagtttttgtttcaatggatttgcctagttggtacagttcatattaagg--gaaccat-------acatggcctcttgggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34720683 77 + 59248254 taattgagtttttgtttcaatggatttgcctagttggtacagttcatattaagg--gaaccat-------acatggcctcttgggt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593056 77 - 13342542 taattgagtttttgtttcaatggatttgcctagttggtacagttcatattaagg--gaaccat-------acatggcctcttgggt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5517615 77 + 7714307 taattgactttttgtttcaatggatttgcctagttggtacagttcatattaagg--gaaccat-------acatggcctcttgggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29320933 77 + 50890351 taattgactttttgtttcaatggatttgcctagttggtacagttcatataaagg--gaaccat-------acatggcctcttgggt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 953265 77 - 2385121 taattgactttttgtttcaatggatttgcctagttgttacagttcatattaagg--gaaccat-------acatggcctcttgggt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2395200 77 + 4274983 taattgactttttgtttcaatggatttgcctagttggtacagttcatattaagg--gaaccat-------acatggcctcttgggt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28605916 80 + 49145316 tgattgactttttgtttcaatggatttgcctaatcgggacagttcataataagg--gaaccatat----aatatggccttttgggt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5459241 64 + 8899380 tgattgagtttttgttccaatggatttgcctaattgggatagttc------------------at----aatatagccgtttgggt i saiBol1.JH378197 C 0 C 0 s canFam3.chr1 4658858 83 - 122678785 -aatctagtttcgatttcagtggatttttctatcctggatgattaatattaatg--gaatcatatttagtatgtggccttttgtgt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 395991 77 + 643850 taatctactttctgtctc--tgtatttatttattctacgtatgtcatagtgaaattatacaat-------atttgtccttttgagt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5535472 193 + 5549422 I e mm10.chr7 111142521 1573 - 145441459 I e aotNan1.NW_018505377v1 409281 1455 - 4471408 I e cebCap1.NW_016107633v1 1663759 1049 - 2680843 I a score=40698.000000 s hg38.chr19_GL383574v1_alt 130415 3 + 155864 ctg s panTro5.chr19 36198035 3 + 61309027 ctg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942255 3 + 64411610 ctg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6353972 3 - 8369475 ctg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63951497 3 - 106955855 ctg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30266842 3 + 53671032 ctg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34720760 3 + 59248254 ctg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593133 3 - 13342542 ctg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5517692 3 + 7714307 ctg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29321010 3 + 50890351 ctg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 953342 3 - 2385121 ctg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2395277 3 + 4274983 ctg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28605996 3 + 49145316 ctg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5459305 3 + 8899380 ctg i saiBol1.JH378197 C 0 I 304 s cebCap1.NW_016107633v1 1664808 3 - 2680843 ctg i cebCap1.NW_016107633v1 I 1049 C 0 s aotNan1.NW_018505377v1 410736 3 - 4471408 ctg i aotNan1.NW_018505377v1 I 1455 C 0 s canFam3.chr1 4658941 3 - 122678785 ctg i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 396068 3 + 643850 gtg i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5535472 193 + 5549422 I e mm10.chr7 111142521 1573 - 145441459 I a score=93751.000000 s hg38.chr19_GL383574v1_alt 130418 8 + 155864 gtttcttt s panTro5.chr19 36198038 8 + 61309027 gtttcttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942258 8 + 64411610 gtttcttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6353975 8 - 8369475 gtttcttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63951500 8 - 106955855 atttcttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30266845 8 + 53671032 gcttcttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34720763 8 + 59248254 gcttcttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593136 8 - 13342542 gcttcttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5517695 8 + 7714307 gcttcttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29321013 8 + 50890351 gcttcttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 953345 8 - 2385121 gcttcttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2395280 8 + 4274983 gcttcttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28605999 8 + 49145316 gctttctt i calJac3.chr22 C 0 I 978 s saiBol1.JH378197 5459612 8 + 8899380 gcttcttt i saiBol1.JH378197 I 304 C 0 s cebCap1.NW_016107633v1 1664811 8 - 2680843 ggttcttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 410739 8 - 4471408 gcttcttt i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4658944 8 - 122678785 gcttcttt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 396071 8 + 643850 gcttattt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5535472 193 + 5549422 I e mm10.chr7 111142521 1573 - 145441459 I a score=448410.000000 s hg38.chr19_GL383574v1_alt 130426 46 + 155864 cacttagcataatgttttcaaggttcatccatgt----------atcagtacttta s panTro5.chr19 36198046 46 + 61309027 cacttagcataatgttttcaaggttcatccatgt----------atcagtacttta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942266 46 + 64411610 cacttagcataatgttttcaaggttcatccatgt----------atcagtacttta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6353983 46 - 8369475 cacttagcataatgttttcaaggttcatccatgt----------atcagtacttta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63951508 46 - 106955855 cacttaacataatgttttcaaggtttatccatgt----------atcagtacttta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30266853 46 + 53671032 cacttagcataatgttttcaaggttcatccatgc----------atcagtacttta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34720771 46 + 59248254 cacttagcataatgttttcaaggttcatccatgc----------atcagtacttta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593144 46 - 13342542 cacttagcataatgttttcaaggttcatccatgc----------atcagtacttta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5517703 46 + 7714307 cccttagcataatgttttcaaggttcatccatgc----------atcagtacttta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29321021 46 + 50890351 cacttagcataatgttttcaaggttcatccatgc----------atcagtacttta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 953353 46 - 2385121 ccctttgcataatgttttcaaggttcatccatgc----------atcagtacttta i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2395288 46 + 4274983 cacttagcataatgttttcaaggttcatccgtgt----------atcagtacttta i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5459620 46 + 8899380 cagtttgcataatgttttcaaggttcatccacat----------attggtagttta i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1664819 43 - 2680843 cacttagc---atgttttcaaggttcatccatgt----------gttggtacttta i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 410747 46 - 4471408 cacttagcataatgttttcagggttcatccatgt----------attggtacttta i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4658952 56 - 122678785 catgcagcacagtgttttcaaggctcatgcatgttatagcagggactggtgcttcc i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 396079 55 + 643850 cattcaacatgatgtctttaatgttcattcatgctgtttcatt-ttcagaacttca i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5535472 193 + 5549422 I e mm10.chr7 111142521 1573 - 145441459 I e calJac3.chr22 28606007 978 + 49145316 I a score=116992.000000 s hg38.chr19_GL383574v1_alt 130472 10 + 155864 ttccttttca s panTro5.chr19 36198092 10 + 61309027 ttccttttca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942312 10 + 64411610 ttccttttca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6354029 10 - 8369475 ttccttttca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63951554 10 - 106955855 ttccttttca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30266899 10 + 53671032 ttccttttca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34720817 10 + 59248254 ttccttttca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593190 10 - 13342542 ttccttttca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5517749 10 + 7714307 ttccttttca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29321067 10 + 50890351 ttccttttca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 953399 10 - 2385121 ttccttttca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2395334 10 + 4274983 ttccttttca i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5459666 10 + 8899380 ttccttttcc i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1664862 10 - 2680843 ttccttttcc i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 410793 10 - 4471408 ttccttttcc i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111144094 10 - 145441459 tttttttttt i mm10.chr7 I 1573 C 0 s canFam3.chr1 4659009 10 - 122678785 tcctttttta i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 396134 10 + 643850 ttccttttta i dasNov3.JH563638 C 0 M 1598 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5535472 193 + 5549422 I e calJac3.chr22 28606007 978 + 49145316 I a score=1875924.000000 s hg38.chr19_GL383574v1_alt 130482 204 + 155864 tggctgaataatattccattgtacagtt-atactacattttgtttgtccatttgtcaa-ttgat-agacatttgagttgtttccagtttttgg-tattatgataatactgctccaaacgttcatctgcatgttggtttgtaga--catgtttttcatttctcttggatatatatacctaggagtaaaatttcttggttgtgtggtaattt s panTro5.chr19 36198102 204 + 61309027 tggctgaataatattccattgtacagtt-atactacattttgtttgtccatttgtcaa-ttgat-agacatttgagttgtttccagtttttgg-tattatgataatactgctccaaacattcatctgcatgtcggtttgtagg--catgtttttcatttctcttggatatatatacctaggagtaaaatttcttggttgtgtggtaattt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942322 204 + 64411610 tggctgaataatattccattgtacagtt-atactacattttgtttgtccatttgtcaa-ttgat-agacatttgagttgtttccagtttttgg-tattatgataatactgctccaaacattcatctgcatgtcggtttgtagg--catgtttttcatttctcttggatatatatacctaggagtaaaatttcttggttgtgtggtaattt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6354039 204 - 8369475 tggctgaataatattccattgtaaagtt-atactacattttgtttgtccatttgtcaa-ttgat-agacatttgagttgtttccagtttttgg-tattatgataatactgctccaaacattcatctgcatgttggtttgtagg--catgtttttcatttctcttggatatatatacctaggagtaaaatttcttggttgtgtggtaattt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63951564 204 - 106955855 tggctgaataatattccattgtatagtt-ctactacattttgtttatccatttttcaa-tcgat-aggcatttgagtcgtttccagtttttgg-tattatgataatattgctccaaacattcatctgcatgttggtttgtagg--catgtttttcatttctcttgggtatatatacctaggaggagaatttcttggtcgtgtggtaattt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30266909 202 + 53671032 tggctgaataatattccattgtatagtt-atactacattttgtttatccatttgtcaa-ttgat-agacatttgagttgttttcaggttttgg-tattatgatactattgctcgaaacgttcatatgcatgttggtgtgtagg--tatgtttttcatttctcttgg--atatatacctaggagtagaatttcttggtcatgtaaaaattt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34720827 202 + 59248254 tggctgaataatattccattgtatagtt-atactacattttgtttatccatttgtcaa-ttgat-agacatttgagttgttttcaggttttgg-tattatgatactattgctcgaaacgttcatatgcatgttggtgtgtagg--tatgtttttcatttctcttgg--atatatacctaggagtagaatttcttggtcatgtaaatattt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593200 202 - 13342542 tggctgaataatattccattgtatagtt-atactacattttgtttatccatttgtcaa-ttgat-agacatttgagttgttttcaggttttgg-tattatgatactattgctcgaaacgttcatatgcatgttggtgtgtagg--tatgtttttcatttctcttgg--atatatacctaggagtagaatttcttggtcatgtaaaaattt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5517759 202 + 7714307 tggctgaataatattccattgtatagtt-atactacattttgtttatccatttgtcaa-ttgat-agacgtttgagttgttttcaggttttgg-tattatgataatattgctcgaaacattcatatgcatgttggtgtgtagg--tatgtttttcatttctcttgg--atatatacctaggagtagaatttcttggtcatgtgaaaattt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29321077 202 + 50890351 tggctgaataatattccattgtatagtt-atactacattttgtttatctgtttgtcaa-ttgat-agacatttgagttgttttcaggttttgg-tattatgataatattgctcgaaacgttcatatgcatgttggtgtgtagg--tatgtttttcatttctcttgg--atatatacctaggagtagaatttcttggtcatgtgaaaattt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 953409 202 - 2385121 tggctgaataatattccattgtatagtt-atactacattttgtttatccatttgtcaa-ttgat-agacatttgagttgttttcaggttttgg-tattatgataatattgctcgaaacattcatatgcatgttggtgtgtagg--tatgtttttcatttctcttgg--atatatacctaggagtagaatttcttggtcatgtgaaaattt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2395344 202 + 4274983 tggctgaataatattccgttgtatagtt-atactacattttgtttatccatttgtcaa-ttgat-agacatttgagttgttttcaggttttgg-tattatgataatattgctcaaaacattcatatgcatgtttgtgtgtaag--tatgtttttcatttcgcttgg--atatatacctaggagtagaatttcttggttgtgtggtaatat i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5459676 206 + 8899380 tggctgaataatagtccattgtatagttaatactacattttgtttatccgtttgtcaa-ttgat-agacatttgagttgtttgcagttttgggctattgtgataatattgctccaaacattcatatgcaggttggtgtgtaggcatatgttcttcatttctcttgg--atatatacctacgagtagaatttcttcatcatgtggtaattt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1664872 205 - 2680843 tggctgaataatattccattgtatagtt-atactacattttgtttatccatttgtcaa-ttgat-agacatttgagttgtttgcagttttgggctattgtgataatattgctccaaacattcatacgcaggttggtgtgtaggcatatgttcttcatttctcttgg--atatatacctacaagtagaatttcttcgtcatgtcgtaattt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 410803 205 - 4471408 tggctgaataatattccattgtatagtt-atactacattttgtttatccatttgtcaa-ttgat-agacatttgagttgtttgcagttttgggctattgtgataatattgctccaaaaattcatatgcaggttggtgtgtaggcatatgttcttcatttctcttgg--atatatacctaccagtagaatttcttcgtcatgtggtaattt i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111144104 184 - 145441459 aggctaaataattttctactgtttgatt-atg---------------ccatttgtcaagttgataagatggttca---cattgcagtttttggttgttagaac--taatacttggaacatgtatatgctgttcttggtgtaat--catgcttttcatttttcttgg---tatgttcataggagtaaagtggcttggccatgtggcagttc i mm10.chr7 C 0 C 0 s canFam3.chr1 4659019 190 - 122678785 tggctgaataatattccattgcatggct-ctaccgcatcttgtttattcattcatcag-ctggt-agacatttaagttgtttacactttcttacaattatga--atagt------aaacctcatatacaggtct-tttgtaga--catgtcttacgtttctttcac------atacataggtgtggaattgcttggttatatggtaattc i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e otoGar3.GL873654 5535472 193 + 5549422 I e calJac3.chr22 28606007 978 + 49145316 I a score=2077604.000000 s hg38.chr19_GL383574v1_alt 130686 227 + 155864 -tatgtttaaccatttgaggaactgccactgtgttttccaacatgtctgtaccattttgtattaccctgagcagtatatgaggattccaaattctctaacattttgtcaacacttgttattgtctgtttgattatagtaatcctagtggttgcgaagaggtatctcattgtgattttgatttgc--------atttccctgatagttagtgatgttgactgtcttttcatatgctt s panTro5.chr19 36198306 227 + 61309027 -tatgtttaaccatttgaggaactgccactgtgttttccaacatgtctgtaccattttgtattcccctgagcagtatatgaggattccaaattctctaacattttgccaacacttgttattgtctgtttgattatagtaatcctagtggttgcgaagaggtatctcattgtggttttgatttgc--------atttccctgatagttagtgatgttgactgtcttttcatatgctt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942526 223 + 64411610 -tatgtttaaccatttgaggaactgccactgtgttttccaacgtgtctgtaccattttgtattcccctgagcagtatatgaggattccaaattctctaacattttgccaacacttgttattgtctgtttgattatagtaatcctagtggttgcgaagaggtatctcattgtggttttgatttgc--------atttccctga----tagtgatgttgactgtcttttcatatgctt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6354243 226 - 8369475 -t-tgtttaaccatttgaggaactgccactgtgttttccaacgtgtctgtaccattttgtattcccctgagcagtatgtgaggattccaaattctctaacattttgtcaacacttgttattgtctgtttgattatagtaatcctagtggttgcgaagaggtatctcattgtggttttgatttgc--------atttccctgatagttagtgatgttgactgtcttttcatatgctt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63951768 227 - 106955855 -tatgtttaaccatttgaggaactgccactgtgttttccatcgtgtctgtaccattttgtattcccctgagcagtatatgaggattccaaattctctaacattttgccaacacttgttattgtctgcttgattatagtcatcctagtggttgtgaagtggtatctcattgtggttttgatttgc--------atttccctggtagttagtgatgttgactatcttttcttaggctt i nomLeu3.chr10 C 0 M 100 s rheMac8.chr19 30267111 223 + 53671032 -tttgtttaactatctgaggaactgccactgtgttttccgacgtgtctgtaccattttgtattcccctgagcagtatatgaggattccaaattctgtaacattttgccaacacttgttattgtc----tgattatcgtcatcctagtggttgtgaagaggtatctcattgtggttttgatttgc--------atttccctgatagttaatgatgttgactgtcttttcatatgctt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721029 223 + 59248254 -tttgtttaactatctgaggaactgccactgtgttttccgacgtgtctgtaccattttgtattcccctgagcagtatatgaggattccaaattctgtaacattttgccaacacttgttattgtc----tgattatcgtcatcctagtggttgtgaagaggtatctcattgtggttttgatttgc--------atttccctgatagttaatgatgttgactgtcttttcatatgctt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593402 223 - 13342542 -tttgtttaactatctgaggaactgccactgtgttttccgacgtgtctgtaccattttgtattcccctgagcagtatatgaggattccaaattctgtaacattttgccaacacttgttattgtc----tgattatcgtcatcctagtggttgtgaagaggtatctcattgtggttttgatttgc--------atttccctgatagttaatgatgttgactgtcttttcatatgctt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5517961 226 + 7714307 -tttgtttaactgtctgaggaactgccactgtgttttccgacgtgtctgtaccattttgtattcccctgagcagtatatgaggattccaaattctgtaa-attttgccaacacttgttattgtctgtttgattatagtcatcctagtggttgtgaagacgtatctcattgtggttttgatttgc--------atttccctgatagttaatgatgttgactgtcttttcatatgctt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29321279 223 + 50890351 -tttgtttaactgtctgaggaactgctactgtgttttccgacatgtctgtaccattttgtattcccctgagcagtatatgaggattccaaattctgtaacattttgccaacacttgttattgtc----tgattatcgtcatcctagtggttgtgaagaggtatctcattgtggttttgatttgc--------atttccctgatagttaatgatgttgactgtcttttcatatgctt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 953611 226 - 2385121 -tttgtttaactgtctgaggaactgccactgtgttttccgacgtgtctgtaccattttgtattcccctgagcagtatatgaggattccaaattctgtaa-attttgccaacacttgttattgtctgtttgattatagtcatcctagtggttgtgaagacgtatctcattgtggttttgatttgc--------atttccctgatagttaatgatgttgactgtcttttcatatggtt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2395546 227 + 4274983 -tttgtttaactgtctgaggaactgccactgtgttttccaacgtgtctgtatcattttgtattcccctgagcagtatatgaggattccaaattctgtaacattttgccaacacttgttattgtctgtttgattatagttatcctagtggttgtgaagaggtatctcattgtggttttgatttgc--------atttccctgatagttaatgatgttgactgtcttttcatatgctt i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5459882 225 + 8899380 -taggtttaaccatttgaggaactgcctctgtgttttccaacatgtctgtaccattttgtattcccctgagcagtatatgaggattccagattctctatatttttgctaacacttgttattgtctatttgattatagtcatcctagtggt----------tgtctcattgtggttttgatttgctgtcaggtagatacctgatagttaatgatgttgaatgtcttttcatatgcgt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1665077 227 - 2680843 -taggtttagccatttgaggaactgccactgtgtcttccaacatgtctgtaccattttgtattcccctaagcagtatatgaggattccagattctctacatttttgctaacacttgttattgtctatttgattatagccatcctagtggttgtgaagaggtgtctcattgtggttttgatttgc--------atctacctgatagttaatgatgttgactgtcttttcatatgcgt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411008 227 - 4471408 -tatgtttaaccatttgaggaactgccactgtgttttccaacatgtctgtaccattttgtattcccctgagcagtatatgaggattccaggttctctacatttttgctaacacttgttattgtctatttgattatagccatcctagtggttgtgaagaggtgtctcattgtggttttgatttgc--------atctccctgatagttaatgatgttgactgtcttttcatatgcat i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5535665 103 + 5549422 -tatgtttaaacttctaaggagccactgtactgttttccatagtaggtgcaccattttacatttctaccagcaatatgca------------------------------------------------------------------------------------------------------gc--------attt----------------------ctgtttctccacatcctt i otoGar3.GL873654 I 193 C 0 s mm10.chr7 111144288 167 - 145441459 -tatatttaacaatttagggaagtgtccgctggttttctaaagtatctgcaccattttccttacctgtgagcaatatatgaagattgcagtctctttatgtccttcacaacatttgctat--------tcattattgccaggctagtggttatgaagtggtgtc---ttgtggttttga--------------------------------------------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4659209 191 - 122678785 tattgtt------------------ctgctgacttttcccgagtctctacatccttttacattcccataggcagt----------------ttctccatatcatccccagcatttggtattgtcttttttattaaagccatcccagtggttgtgaagtgggatc---ttgtggttttaacttgc--------acttccctgatagctaatgatgtagagcatcttttcgtgtactt i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e calJac3.chr22 28606007 978 + 49145316 I a score=58310.000000 s hg38.chr19_GL383574v1_alt 130913 7 + 155864 attggca------- s panTro5.chr19 36198533 7 + 61309027 attggca------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942749 7 + 64411610 attggca------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6354469 7 - 8369475 attggca------- i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30267334 7 + 53671032 attggca------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721252 7 + 59248254 attggca------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593625 7 - 13342542 attggca------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5518187 7 + 7714307 attggca------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29321502 7 + 50890351 attggca------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 953837 7 - 2385121 attggcA------- i manLeu1.NW_012102454v1 C 0 M 410 s colAng1.NW_012111697v1 2395773 7 + 4274983 attggca------- i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5460107 7 + 8899380 attggca------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1665304 7 - 2680843 attggca------- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411235 7 - 4471408 attggca------- i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4659400 14 - 122678785 attggccatttgta i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e otoGar3.GL873654 5535768 0 + 5549422 C e mm10.chr7 111144455 0 - 145441459 C e calJac3.chr22 28606007 978 + 49145316 I e nomLeu3.chr10 63951995 100 - 106955855 M a score=160210.000000 s hg38.chr19_GL383574v1_alt 130920 23 + 155864 tatcatctttggagGGTTCATCT s panTro5.chr19 36198540 23 + 61309027 tgtcatctttggagGGTTCATCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942756 23 + 64411610 tgtcatctttggagGGTTCATCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6354476 23 - 8369475 tatcatctttggagGGTTCATCT i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30267341 23 + 53671032 catcttctttggagaGTTCATCT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721259 23 + 59248254 catcttctttggagaGTTCATCT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593632 23 - 13342542 catcttctttggagagttcatct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5518194 23 + 7714307 catcttctttggagGGTTCATCT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29321509 23 + 50890351 catcttctttggagGGTTCATCT i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2395780 23 + 4274983 catcttatttggagGGTTCATCT i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5460114 23 + 8899380 catcttctttggaggaTTCATCG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1665311 23 - 2680843 catcttctttggagGGTTCATCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411242 23 - 4471408 catcttctttggagGGTTCATCT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5535768 8 + 5549422 ---------------gccCATAt i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4659414 23 - 122678785 tatcatttttgaaaagttcatct i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e mm10.chr7 111144455 0 - 145441459 C e calJac3.chr22 28606007 978 + 49145316 I e manLeu1.NW_012102454v1 953844 410 - 2385121 M e nomLeu3.chr10 63951995 100 - 106955855 M a score=33028.000000 s hg38.chr19_GL383574v1_alt 130943 9 + 155864 ATAtttgtg s panTro5.chr19 36198563 9 + 61309027 ATAtttgtg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942779 9 + 64411610 ATAtttgtg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6354499 9 - 8369475 ATAtttgtg i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30267364 9 + 53671032 ATATTTGGt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721282 9 + 59248254 ATATTTGGt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593655 9 - 13342542 atATTTGGt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5518217 9 + 7714307 ATATTTGGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29321532 9 + 50890351 ATATTTGGt i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2395803 9 + 4274983 ATATTTGGT i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5460137 2 + 8899380 tt------- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1665334 8 - 2680843 ATAtttgt- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411265 9 - 4471408 ATATttgtt i aotNan1.NW_018505377v1 C 0 I 2 s otoGar3.GL873654 5535776 9 + 5549422 ttatttatt i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111144455 6 - 145441459 ---tttgtg i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e canFam3.chr1 4659437 0 - 122678785 C e calJac3.chr22 28606007 978 + 49145316 I e manLeu1.NW_012102454v1 953844 410 - 2385121 M e nomLeu3.chr10 63951995 100 - 106955855 M a score=50340.000000 s hg38.chr19_GL383574v1_alt 130952 9 + 155864 ttttgtttg s panTro5.chr19 36198572 9 + 61309027 ttttgtttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942788 9 + 64411610 ttttgtttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6354508 9 - 8369475 ttttgtttg i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30267373 9 + 53671032 ttttgtttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721291 9 + 59248254 ttttgtttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593664 9 - 13342542 ttttgtttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5518226 9 + 7714307 TTTTGTTTG i cerAty1.NW_012005268v1 C 0 I 314 s chlSab2.chr6 29321541 9 + 50890351 ttttgtttg i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2395812 9 + 4274983 ttttgtttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28606985 9 + 49145316 ttttttttt i calJac3.chr22 I 978 C 0 s saiBol1.JH378197 5460139 8 + 8899380 -ttttgttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1665342 9 - 2680843 ttttgtttg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411276 9 - 4471408 ttgtttgtt i aotNan1.NW_018505377v1 I 2 C 0 s otoGar3.GL873654 5535785 3 + 5549422 -ttt----- i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111144461 9 - 145441459 ttttcctca i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e canFam3.chr1 4659437 0 - 122678785 C e manLeu1.NW_012102454v1 953844 410 - 2385121 M e nomLeu3.chr10 63951995 100 - 106955855 M a score=2250.000000 s hg38.chr19_GL383574v1_alt 130961 1 + 155864 t s rheMac8.chr19 30267382 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721300 1 + 59248254 t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593673 1 - 13342542 t i macNem1.NW_012011689v1 C 0 C 0 s colAng1.NW_012111697v1 2395821 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28606994 1 + 49145316 t i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5460147 1 + 8899380 g i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1665351 1 - 2680843 t i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411285 1 - 4471408 t i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111144470 1 - 145441459 t i mm10.chr7 C 0 I 52 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e otoGar3.GL873654 5535788 0 + 5549422 C e chlSab2.chr6 29321550 0 + 50890351 C e canFam3.chr1 4659437 0 - 122678785 C e manLeu1.NW_012102454v1 953844 410 - 2385121 M e cerAty1.NW_012005268v1 5518235 314 + 7714307 I e nomLeu3.chr10 63951995 100 - 106955855 M e gorGor5.CYUI01015150v1 6354517 0 - 8369475 C e panPan2.chr19 39942797 0 + 64411610 C e panTro5.chr19 36198581 0 + 61309027 C a score=3276.000000 s hg38.chr19_GL383574v1_alt 130962 1 + 155864 t s rheMac8.chr19 30267383 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721301 1 + 59248254 t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593674 1 - 13342542 t i macNem1.NW_012011689v1 C 0 C 0 s colAng1.NW_012111697v1 2395822 1 + 4274983 t i colAng1.NW_012111697v1 C 0 I 302 s calJac3.chr22 28606995 1 + 49145316 t i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5460148 1 + 8899380 t i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1665352 1 - 2680843 t i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411286 1 - 4471408 t i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e otoGar3.GL873654 5535788 0 + 5549422 C e mm10.chr7 111144471 52 - 145441459 I e chlSab2.chr6 29321550 0 + 50890351 C e canFam3.chr1 4659437 0 - 122678785 C e manLeu1.NW_012102454v1 953844 410 - 2385121 M e cerAty1.NW_012005268v1 5518235 314 + 7714307 I e nomLeu3.chr10 63951995 100 - 106955855 M e gorGor5.CYUI01015150v1 6354517 0 - 8369475 C e panPan2.chr19 39942797 0 + 64411610 C e panTro5.chr19 36198581 0 + 61309027 C a score=373894.000000 s hg38.chr19_GL383574v1_alt 130963 51 + 155864 tttttttctttagagatggagtcttgctc-tgtcttccagactggtgtgcag s panTro5.chr19 36198581 51 + 61309027 tttttttctttagagatggagtcttgctc-tgtcttccaggctggtgtgcag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942797 51 + 64411610 tttttttctttagagatggagtcttgctc-tgtcttccaggctggtgtgcag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6354517 51 - 8369475 tttttttctttagagatggagtcttgctc-tgtcttccaggctggtgtgcag i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30267384 49 + 53671032 --tgtttttttagagatggagtcttgctc-tgtcgtctaggctggagtgcag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721302 49 + 59248254 --tgtttttttagagatggagtcttgctc-tgtcgtctaggctggagtgcag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593675 49 - 13342542 --tgtttttttagagatggagtcttgctc-tgtcgtctaggctggagtgcag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5518549 51 + 7714307 tttttttctttagagatggagtcttgctc-tgtcgtctaggctggagtgcag i cerAty1.NW_012005268v1 I 314 C 0 s chlSab2.chr6 29321550 51 + 50890351 tttttttctttagagatggagtcttgctc-tgtcgtctaggctggagtgcag i chlSab2.chr6 C 0 C 0 s colAng1.NW_012111697v1 2396125 51 + 4274983 tttttttctttagagatggagtcttgctc-tgtcgtctaggctggagtgcag i colAng1.NW_012111697v1 I 302 C 0 s calJac3.chr22 28606996 52 + 49145316 cttttttctttagagatggagtctcactcttgtcacccaggctgaagtgcag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5460149 51 + 8899380 tttttctctttagagatggagcctcgctc-tgtcacccaggctgaagtgcag i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1665353 51 - 2680843 tttttttctttagagatgaagtctcgctc-tgtcacccaggctgaagtgcag i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411287 51 - 4471408 tttttttctttagagatggagtctcgctc-tgttacccaggctgaagtgcag i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5535788 37 + 5549422 ------------aagacagagtctcactc-tcttgctcaggctagagccc-- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e mm10.chr7 111144471 52 - 145441459 I e canFam3.chr1 4659437 0 - 122678785 C e manLeu1.NW_012102454v1 953844 410 - 2385121 M e nomLeu3.chr10 63951995 100 - 106955855 M a score=294804.000000 s hg38.chr19_GL383574v1_alt 131014 37 + 155864 tggtgccatctt------ggctcactgcagccta----tgtttccta s panTro5.chr19 36198632 37 + 61309027 tggtgccatctt------ggctcactgcagccta----tgtttccta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942848 37 + 64411610 tggtgccatctt------ggctcactgcagccta----tgtttccta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6354568 37 - 8369475 tggtgccatctt------ggctcactgcagccta----tgtttccta i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30267433 37 + 53671032 tggtgccatctt------ggctcactgcaaccta----tgtttcctg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721351 37 + 59248254 tggtgccatctt------ggctcactgcaaccta----tgtttcctg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593724 37 - 13342542 tggtgccatctt------ggctcactgcaaccta----tgtttcctg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5518600 37 + 7714307 tggtgccatctt------ggctcactgcaaccta----tgtttcctg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29321601 37 + 50890351 tggtgccatctt------ggctcactgcaacctc----cgcttcctg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 954257 37 - 2385121 tggtgccatctt------ggctcactgcaaccta----tgtttcctg i manLeu1.NW_012102454v1 M 410 C 0 s colAng1.NW_012111697v1 2396176 37 + 4274983 tggtgccatctt------ggctcactgcaaccta----tgttttctg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28607048 47 + 49145316 tgatgcaatctcagctcaggctcactgcaacctacctgtgtctcctg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5460200 47 + 8899380 tggtgcagtctcagctcaggctcactgcaacctatctgtgtctcctg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1665404 47 - 2680843 tggcacagtctcagctcaggctcactgcaacctatctgtgtctcctg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411338 47 - 4471408 tggtgcaatctcagctcaggctcactgcaacctatctgtgtctcctg i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5535825 36 + 5549422 -tgtgtcagcct------agctcacagcaacctc----aaacttctg i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e mm10.chr7 111144471 52 - 145441459 I e canFam3.chr1 4659437 0 - 122678785 C e nomLeu3.chr10 63951995 100 - 106955855 M a score=2011106.000000 s hg38.chr19_GL383574v1_alt 131051 201 + 155864 ggttcaagcagttctcctgcctcagcttcctgagtagctgggattacaggtgtgcgcca-ccacgcccagctaattttt--tatttttggtagagatggggtttc-----------------------------gccatgttgaccaggctggtctcatgctcctgacctcaggtgatctgcctgcctcggcctcccaaagtgctgggattacaggggtgagcacctgtgccc s panTro5.chr19 36198669 202 + 61309027 ggttcaagcagttctcctgcctcagcttcctgagtagctgggattacaggtgtgcgcca-ccacgcccagctaatttttg-tatctttggtagagatggggtttt-----------------------------gccatgttgaccaggctggtctcatgctcctgacctcaggtgatctgcctgcctcggcctcccaaagtgctgggattacaggggtgagcacctgcgccc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39942885 202 + 64411610 ggttcaagcagttctcctgcctcagcttcctgagtagctgggattacaggtgtgcgcca-ccacgcccagctaatttttg-tatttttggtagagatggggtttc-----------------------------gccatgttgaccaggctggtctcatgctcctgacctcaggtgatctgcctgcctcggcctcccaaagtgctgggattacaggggtgagcacctgcgccc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6354605 200 - 8369475 ggttcaagcagttctcctgcctcagcttcctgagtagctgggattacaggtgtgcgcca-ccacgcccagctaatttttg-tatttttggtagagatggggtttc------------------------------ccatgttgaccaggctggtctcatgctcctgacctcaggtgatctgcctgcctcggcctcccaaagtgct-ggattacaggggtgagcacctgcgccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63952096 202 - 106955855 ggttcaagcagttctcttgcctcagcctcctgagtagctgaga-tacaggtgtgcgccacccccgcccggctaatttttg-tatttttggtagagatggggtttc-----------------------------accatgttggccaggctggtctcaaactcctgacctcaggtgatctgcctgcctcggcctcccaaagtgctgggattacaggggtgagcacccacgccc i nomLeu3.chr10 M 100 C 0 s rheMac8.chr19 30267470 198 + 53671032 ggttcaagcagttc---tgcctcagcctcctgagtagctgggattacaggcgtgcacca-ccacgcccagctaatttttg-tatttttggtagagaccgggttcc-----------------------------accatgttggccaggctggtcttacactcctgacctcaagtgatctgcctgccttggcctcccaaagtgctgggatta-agaggtgagcccccgcgccc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721388 198 + 59248254 ggttcaagcagttc---tgcctcagcctcctgagtagctgggattacaggcgtgcacca-ccacgcccagctaatttttg-tatttttggtagagaccgggttcc-----------------------------accatgttggccaggctggtcttacactcctgacctcaagtgatctgcctgcctcggcctcccaaagtgctgggatta-agaggtgagcccccgcgccc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593761 198 - 13342542 ggttcaagcagttc---tgcctcagcctcctgagtagctgggattacaggtgtgcacca-ccacgcccagctaatttttg-tatttttggtagagaccgggtttc-----------------------------accatgttggccaggctggtcttacactcctgacctcaagtgatctgcctgcctcggcctcccaaagtgctgggatta-agaggtgagcccccgcgccc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5518637 198 + 7714307 ggttcgagcagttc---tgcctcagcctcctgagtagctgagattacaggtgtgcacca-ccacgcccggctaatttttg-tatttttggtagagactgggtttc-----------------------------accatgttggccaggctggtcttacactcctgacctcaggtgatctgcctgcctcgacctcccaaagtgctgggatta-aggggtgagcccccgtgccc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29321638 198 + 50890351 ggttcaagcagttc---tgcctcagcctcctgagtagctgggattacaggtgtgcacca-ccacgcccggctaatttttg-tatttttggtagagactgggtttc-----------------------------accatgttggccaggctggtcttacactcctgacctcaggtgatctgcctgcctcggcctcccaaagtgctgggatta-aggggtgagcccccgcaccc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 954294 198 - 2385121 ggttcaagcagttc---tgcctcagcctcctgagtagctgagattacaggtgtgcacca-ccacgcccggctaatttttg-tatttttggtagagactgggtttc-----------------------------accatgttggccaggctggtcttacactcctgacctcaggtgatctgcctgcctcggcctcccaaagtgctgggatta-aggggtgagcccccgtgccc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2396213 198 + 4274983 ggttcaagcagttc---tgcctcagcctcctgagtagctgggattacaggtgtgcacca-ccacgcccggctaatttttg-tatttttggtagagaccgggtttc-----------------------------accatgttggccaggctggtcttacactcctgacctcaggtgatctgcctgcctcggcctcccaaagtgctggaatta-aggggtgagcccccgcgccc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28607095 202 + 49145316 ggttcaggcagttctcctgcctcagactcctgagtagctgagattacagctgtgcacca-ccacgcctggctaatttttg-tatttttggtagacacagggtttc-----------------------------accatgtcaactgggctggtctcacactcctgatctgaggtaatctgcctatctcagcctcccaaagtgctgagattacaggggtgagccaccctgcct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5460247 202 + 8899380 ggttcaggcagttctcctgcctcagcctcctgagtagctgggattacagctgtgcacca-ccacgcctggctaatttttg-tatttttggtagagacatggtttc-----------------------------accgtgtctactgggctggtctcacactcctgacctcaggtgatctgcctatctcagcctcccaaactgctgggattacaggggtgagccaccctgcct i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1665451 202 - 2680843 ggttcagatagttctcctgcctcagcttcctgaatagctgggattacagctgtgcacca-ctacgcctggctaatttctg-tatttttggtcgagacatggtttc-----------------------------accttgtcgactgggctggtctcacactcctgacctgaagtgatctgcctacctcagccttccaaagtgctgggattacaggagtgagccaccctgcct i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411385 202 - 4471408 ggttcagacagttctcctgtctcagcctcctgagtagctgggattacagctgtgcacca-ccacacctggctaatttttg-tatttttggtagagacagggtttc-----------------------------accatgtcaactgggctggtctcacactcctgacctcaggtgatctgcctacctcggcctcccaaagtgctgggattacaggggtaagccaccctgcct i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5535861 219 + 5549422 agttcaaacaatcctcctgccccagcctccctactatttggtagtatagttgcctgcca-tgatgcccagctaatttttgatctttttagtagagacagagtctcttttttttttttttttttttgacagagtctcactcttgctcaggctggtcttgaactccttagctcaagagat-------------actcccaaagtgctaggattacaggcgtgagccaccatgcct i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e mm10.chr7 111144471 52 - 145441459 I e canFam3.chr1 4659437 0 - 122678785 C a score=69927.000000 s hg38.chr19_GL383574v1_alt 131252 7 + 155864 agccCAT s panTro5.chr19 36198871 7 + 61309027 agccCAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39943087 7 + 64411610 agccCAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6354805 7 - 8369475 agccCAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63952298 7 - 106955855 agcTCAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30267668 7 + 53671032 agccCGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721586 7 + 59248254 agccCGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593959 7 - 13342542 agccCGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5518835 7 + 7714307 agccTGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29321836 7 + 50890351 agccCGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 954492 7 - 2385121 agccTGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2396411 7 + 4274983 agccCGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28607297 7 + 49145316 ggccCAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5460449 7 + 8899380 ggccCAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1665653 7 - 2680843 ggccCAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411587 7 - 4471408 ggtcCAT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5536080 7 + 5549422 ggccAAT i otoGar3.GL873654 C 0 I 17 s mm10.chr7 111144523 7 - 145441459 AGTTCAT i mm10.chr7 I 52 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e canFam3.chr1 4659437 0 - 122678785 C a score=1430.000000 s hg38.chr19_GL383574v1_alt 131259 2 + 155864 CC s panTro5.chr19 36198878 2 + 61309027 CC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39943094 2 + 64411610 CC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6354812 2 - 8369475 CC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63952305 2 - 106955855 CC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30267675 2 + 53671032 AT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721593 2 + 59248254 AT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593966 2 - 13342542 AT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5518842 2 + 7714307 AT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29321843 2 + 50890351 AT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 954499 2 - 2385121 AT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2396418 2 + 4274983 AC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28607304 2 + 49145316 CC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5460456 2 + 8899380 CC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1665660 2 - 2680843 CC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411594 2 - 4471408 CC i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111144530 2 - 145441459 TT i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e otoGar3.GL873654 5536087 17 + 5549422 I e canFam3.chr1 4659437 0 - 122678785 C a score=2782610.000000 s hg38.chr19_GL383574v1_alt 131261 278 + 155864 ATATTTGATCATCAGTTTTGGCAAGGTAAATTAAGTTGC-AAAACCTGAAACTTTAAAGGAACAAACATAACACATTTGATTGTAGAAATGAGGGAAAAAGA--------GTGTGTGTGGG----TATGTGTGT------------------TTATGTA--CATATGTGTATATGTACAGTGGAAGATGCCATAAACAGATTTGTAAAAGTTAAAGGACAGGCT-CCCCAGAGAAATAGCCAGTGTGCTCCATCCACATCAAG-------------CCTGAGTGTGA----G-AGAGTTCTGGATAA-TCCTGTTACCTGGCTGTGACTTT s panTro5.chr19 36198880 279 + 61309027 CTATTTGATCATCAGTTTTGGCAAGGTAAATTAAGTTGC-AAAACCTGAAACTTTAAAGGAACAAACATAACACATTTGATTGTAGAAATGAGGGAAAA--A--------GTGTGTGTGGG----TATGTGTGT------------------TTATGTA--CATATGTGTATATGTACAGTGGAAGATGCCATAAACAGATTTGTAAAAGTTAAAGGACAGGCT-CCCCAGAGAAATAGCCAGTGTGCTCCATCCACATCAAG-------------CCTGAGTGTGAGAG-G-AGAGTTCTGGATAA-TCCTGTTACCTGGCTGTGACTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39943096 279 + 64411610 CTATTTGATCATCAGTTTTGGCAAGGTAAATTAAGTTGC-AAAACCTGAAACTTTAAAGGAACAAACATAACACATTTGATTGTAGAAATGAGGGAAAA--A--------GTGTGTGTGGG----TATGTGTGT------------------TTATGTA--CATATGTGTATATGTACAGTGGAAGATGCCATAAACAGATTTGTAAAAGTTAAAGGACAGGCT-CCCCAGAGAAATAGCCAGTGTGCTCCATCCACATCAAG-------------CCTGAGTGTGAGAG-G-AGAGTTCTGGATAA-TCCTGTTACCTGGCTGTGACTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6354814 281 - 8369475 ATATTTGATCATCAGTTTTGGCAAGGTAAATTAAGTTGC-AAAACCTGAAACTTTAAAGGAACAAACATAACACATTTGATTGTAGAAATGAGGGAAAAAGA--------GTGTGTGTGGG----TATGTGTGT------------------TTATGTA--CATATGTGTATATGTACAGTGGAAGATGCCATAAACAGATTTGTAAAAGTTAAAGGACAGGCT-TCCCAGAGAGATAGCCAGTGTGCTCCATCCACATCAAG-------------CCTGAGTGTGAGAG-G-AGAGTTCTGGATAA-TCCTGTTACCTGGCTGTGACTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63952307 285 - 106955855 ATATTTGATCATCAGTTTTGGCAAGGTAAATTAAGTTGCAAAAAAAAAAAAATTTAAAGGAACAAACATAA-ACATTTGATTGTAGAAATGAGGGAAAAAGA--------gtgtgtgtgtgggtatgtgtgtgt------------------gtatgta--catatgtgtatatgtACAGTGGAAGATGCCATAAACAGATTTGTAAAAGTTAAAGGACAGGCT-CCCCAGAGAAATAGCCAGTGTGCTCCATCCACATCAAG-------------CCTGAGCGTGAGAG-G-AGAGTTCTGGATAA-TCCTGTTACCTGGCTGTGACTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30267677 278 + 53671032 ATATTTGATCATCAGTTTTGGCAAGGTAAATTAAGTTGC-AAAACCTGAAACTTTAAAGGAACAAACAT-ACATATTTGTTTGTAGAAAGGAGGGGAAAAGA----------gtgtgtgtg----tgtgtgtgt------------------gtgtgta--catgtgtgtatatgtACAGTGGAAGGTGCTATATACAGATTTGTAAAAGTTAAAGGACAGGCT-CCCCAGAGAAATAGCCAGTGTGCTCCATCTACATCAAG-------------CCTGAGCGTGAGAG-G-AGAGTTCTGGATAA-TCCTGTCACCTGGCTCTGACTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721595 280 + 59248254 ATATTTGATCATCAGTTTTGGCAAGGTAAATTAAGTTGC-AAAACCTGAAACTTTAAAGGAACAAACAT-ACATATTTGTTTGTAGAAAGGAGGGGAAAAGA--------gtgtgtgtgtg----tgtgtgtgt------------------gtgtgtA--CATGTGTGTATATGTACAGTGGAAGGTGCTATATACAGATTTGTAAAAGTTAAAGGACAGGCT-CCCCAGAGAAATAGCCAGTGTGCTCCATCTACATCAAG-------------CCTGAGCGTGAGAG-G-AGAGTTCTGGATAA-TCCTGTCACCTGGCTCTGACTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4593968 273 - 13342542 ATATTTGATCATCAGTTGTGGCAAGGTAAATTAAGTTGC-AAAACCTG--------AAGGAACAAACAT-ACATATTTGTTTGTAGAAAGGAGGGGAAAAGA------Atgtgtgtgtgtg----tgtgtgtgt------------------gtgtgtA--CATGTGTGTATATGTACAGTGGAAGGTGCCATATACAGATTTGTAAAAGTTAAAGGACAGGCT-CCCCAGAGAAATAGCCAGTGTGCTCCATCTACATCAAG-------------CCTGAGCGTGAGAG-G-AGAGTTCTGGATAA-TCCTGTCACCTGGCTCTGAC-TT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5518844 274 + 7714307 ATATTTGATCATCAGTTTTGGCAAGGTAAATTAAGTTGC-AAAACCTGAAACTTTAAAGGAACAAACAT-ACATATTTGTTTGTAGAAAGGAGGGGAAAAGA--------------gtgtg----tgtgtgtgt------------------gtgtgta--catatgtgtatatgtACAGTGGAAGGTGCCATATACAGATTTGTAAAAGTTAAAGGACAGGCT-CCCCAGAGAAATAGCCAGTGTGCTCCATCCACATCAAG-------------CCTGAGTGTGAGAG-G-AGAGTTCTGGATAA-TCCTGTTACCTGGCTCTGACTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29321845 276 + 50890351 ATATTTGATCATCAGTTTTGGCAAGGTAAGTTAAGTTGC-AAGACCTGAAACTTTAAAGGAACAAACAT-ACATATTTGTTTGTAGAAAGGAGGGGAAAAGA------------gtgtgtg----tgtgtgtgt------------------gtgtgta--catatgtgtatatgtACAGTGGAAGGTGCCATATACAGATTTGTAAAAGTTAAAGGACAGGCT-CCCCAGAGAAATAGCCAGTGTGCTCCATCCACATCAAG-------------CCTGAGCGTGAGAG-G-AGAGTTCTGGATAA-TCCTGTCACCTGGCTCTGACTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 954501 288 - 2385121 GTATTTGATCATCAGTTTTGGCAAGGTAAATTAAGTTGC-AAAACCTGAAACTTTAAAGGAACAAACAT-ACATATTTGTTTGTAGAAAGGAGGGGAAAAGAgtgtgtgtgtgtgtgtgtg----tgtgtgtgt------------------gtgtgtA--CATATGTGTATATGTACAGTGGAAGGTGCCATATACAGATTTGTAAAAGTTAAAGGACAGGCT-CCCCAGAGAAATAGCCAGTGTGCTCCATCCACATCAAG-------------CCTGAGTGTGAGAG-G-AGAGTTCTGGATAA-TCCTGTTACCTGGCTCTGACTTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2396420 282 + 4274983 ATATTTGATCATCAGTTTTGGCAAGGTAAATTAAGTTGC-AAAACCTGAAACTTTAAAGGAACAAACAT-ACATATTTGTTTGTAGAAAGGAGGGGAAAAgt------gtgtgtgtgttta----tgtgtgtgt------------------gtatgta--catgtgtgtttatgtACAGTGGAAGGTGCCATATACAGATTTGTAAAAGTTAAAGGACAGGCT-CCCCAGAGAAATAGCCAGTGTGCTCCATCCACATCAAG-------------CCTGAACATGAGAG-G-AGAGTTCTGGATAA-TCCTGTTACCTGGCTCTGACTTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28607306 296 + 49145316 ATATTTGATCATCAGTTTTGGCAAGGTAAATTGAGTTTC-AAAACCTGAAGCTTTAAAAGTACAAACAT-ACG----TTTTTGTAGAAATGAGGGGA-AAgt------gtgtgtgtgtgtg----tgtgtgtgtgtgtgtgtgtgtgtgtacgtacata--catatgtgtatgtgtACGGTGGAAGATGCCATAAACAGATTTGTAAAAGATAAAGGACAGGCT-CCCCAGAGAAATAGCCAGTGTGCTCTATCCATATCAGG-------------CCTGAGCGTGAGAG-G-AGAATTCTGGAAAATTCCTGTTACTTGGCTGTGACTTT i calJac3.chr22 C 0 I 510 s saiBol1.JH378197 5460458 278 + 8899380 ATATTTGATCATCAGTTTTGGCAAGGTAAATTAAGTTTC-AAAACCTGAAACTTTAAAAGTACAAACAT-ACG----TATTTGTAGAAATGAGGGGACAAgt------gtgtgtgtgtgtg----tatgtgtgt------------------gtacgta--catatgtgtatatgtACAGTGGAAGACGCCATAAACAGATTTGTAAAAGATAAAGGACAGGCT-CCCCAGAGAAGTAGCCAGTGTGCTCCATCCATGTCAGG-------------CCTGAGCATGAGAG-G-AGAATTCTGGATAA-TCCTGTTACTTGGCTGTGACTTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1665662 299 - 2680843 ATATTTGATCATCAGTTTTGGCAAGGTAAATTAAGTTTC-AAAACCTGAAACTTTAAAAGTACATACAT-ACA---TTATTTGTAGAAATGAGGGGAAAAgt------gtgtgtgtgtgtg----tgtgtgtgtgtgtgtgtatgtgtgtatgtgCATATGCATATGTGTATATGTACAGTGAAAGATGCCATAAACAGGTTTGTAAAAGATAAAGGACAGGCT-CCCCAGAAAAATAGCCAGTGTGCTCCATCCGCGTCAGG-------------CCTGAGCATGAGAG-G-AGAATTCTGGATAA-TCCTGTTACTTGGCTGTGACTTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411596 270 - 4471408 ATATTGGATCATCAGTTTTGGCAAGGTAAATTAAGTTTC-AAAACCTGAAACTTTAAAAGTTCAAATAT-ACG----TATTTGTAGAAATGAGGGGAAAAGT------ATGTATGTGTGTG----T--------------------------GTACGTA--CATATGTGTATATGTACAGTGGAAGATGCCATAAACAGATTTGTAAAAGATAAAGGACAGGCT-CCCCAGAGAAATAGCCAGTGTGCTCCATCCACGTCAGG-------------CCTGAGCGTGAGAG-G-AGAATTCTGGATAA-TCCTGTTACTTGGCTGTGACTTT i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111144532 231 - 145441459 ATGTTTGAGCATCACTTTGGGAACTGTAAA----------GAAACGGGA--------------ATATAT-ATATATCTGACTACAGAAACAAGGGAGGAAAG-----------------------TATACGTGT------------------GCATACA--TGTTTGTTTATA--------AAAAGATTCCATAAACAGATTTGT--ATGGTAGAGAACAGGCC-TCTCAGAGAAACA-CCAGAGTTTTCTAGCCATATTAAG-------------CCAGAGCTTGTCTGTG-GGGGTTCCTAATGA-TCCTGAAATCT-----TGACTTT i mm10.chr7 C 0 C 0 s canFam3.chr1 4659437 258 - 122678785 tcttttggtcattAATTTTGGCAAGGTAAATTAAGTTGC-AAAACCCAAAAC--TGAAAGAACAGGTGA-GTATATTTGACTAGAGAAATGAG-----------------GTATGTGTGTG----CACGTGCGT------------------GCATGCA--GGT--------------AGTGAAAGTTTCTATAAACAGA--TGTAAAAGATAAAGGAGAGGCTCCCCCGGAGAAATAGCCA--GCTCTCCACCCACCTATAGTCTTCACTCTCCACCTGAGCTTGACAA-GCAGGGTGCTCGATTA---------CCTAGCTGTGACTTT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e otoGar3.GL873654 5536087 17 + 5549422 I a score=369813.000000 s hg38.chr19_GL383574v1_alt 131539 30 + 155864 GGAAGTGGAGACCATGATCTCTGCCTTCTC s panTro5.chr19 36199159 30 + 61309027 GGAAGTGGAGACCATGATCTCTGCCTTCTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39943375 30 + 64411610 GGAAGTGGAGACCATGATCTCTGCCTTCTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6355095 30 - 8369475 GGAAGTGGAGACCATGATCTCTGCCTTCTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63952592 30 - 106955855 GGAAGTGGAGACCATGATCTCTGCCTTCTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30267955 30 + 53671032 GGAAGTGGAGACTATGATCTCTCCCTTCTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721875 30 + 59248254 GGAAGTGGAGACTATGATCTCTGCCTTCTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4594241 30 - 13342542 GGAAGTGGAGACTATGATCTCTGCCTTCTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5519118 30 + 7714307 GGAAGTGGAGACTATGATCTCTGCCTTCTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29322121 30 + 50890351 GGAAGTGGAGACTGTGATCTCTGCCTTCTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 954789 30 - 2385121 GGAAGTGGAGACTATGATCTCTGCCTTCTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2396702 30 + 4274983 GGAAGTGGAGACTATGATCTCTGCCTCCTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28608112 29 + 49145316 AGAAGTGGAG-CCATGATCTCTGCCGTTTC i calJac3.chr22 I 510 C 0 s saiBol1.JH378197 5460736 30 + 8899380 AGAAGTGGAGACCATGATCTCTGCCTTCTC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1665961 30 - 2680843 AGAAGTGGAGACCATGATCTCTGCCTTCTC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411866 30 - 4471408 AGAAGTGGAGACCATGATCTCTGCCTTCTC i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111144763 30 - 145441459 GGAAATGGAAACCATAGTATCTGCCTTCTC i mm10.chr7 C 0 I 131 s canFam3.chr1 4659695 26 - 122678785 GGAAGTAGAGACCATGATCTCTGCCT---- i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e otoGar3.GL873654 5536087 17 + 5549422 I a score=131575.000000 s hg38.chr19_GL383574v1_alt 131569 15 + 155864 CCTCA-----TATCATCTGT s panTro5.chr19 36199189 15 + 61309027 CCTCA-----TATCATCTGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39943405 15 + 64411610 CCTCA-----TATCATCTGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6355125 15 - 8369475 CCTCA-----TATCATCTGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63952622 15 - 106955855 CCACA-----TATCATCTGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30267985 15 + 53671032 CCTCA-----TATCATCTGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721905 15 + 59248254 CCTCA-----TATCATCTGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4594271 15 - 13342542 CCTCA-----TATCATCTGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5519148 15 + 7714307 CCTCA-----TATCATCTGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29322151 15 + 50890351 CCTCA-----TATCATCTGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 954819 15 - 2385121 CCTCA-----TATCATCTGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2396732 15 + 4274983 CCTCA-----TATCATCTGT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28608141 14 + 49145316 CCTCG-----TATCA-TTGT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5460766 15 + 8899380 CCTTG-----TATCATTTGT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1665991 15 - 2680843 CCTTG-----TATCATTTGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411896 15 - 4471408 CCTTG-----TATCATTTGT i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111144924 20 - 145441459 ccccagAGTGCATCACCCAT i mm10.chr7 I 131 C 0 s canFam3.chr1 4659721 1 - 122678785 -------------------T i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 396144 1598 + 643850 M e otoGar3.GL873654 5536087 17 + 5549422 I a score=303911.000000 s hg38.chr19_GL383574v1_alt 131584 25 + 155864 CTTAAGGTCACAGATACCGCAGCCA s panTro5.chr19 36199204 25 + 61309027 CTTAAGGTCACAGATACCGCAGCCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39943420 25 + 64411610 CTTAAGGTCACAGATACCGCAGCCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6355140 25 - 8369475 CTTAAGGTCACAGATACCGCAGCCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63952637 25 - 106955855 CTTAAGGTCACAGATACCTTAGCCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30268000 25 + 53671032 CTTAAGGTCACAGATGCTGCAGCCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721920 25 + 59248254 CTTAAGGTCACAGATGCTGCAGCCA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4594286 25 - 13342542 CTTAAGGTCACAGATGCTGCAGCCA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5519163 25 + 7714307 CTTAAGGTCACAGATGCTGCAGCCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29322166 25 + 50890351 CTTAAGGTCACAGATGCTGCAGCCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 954834 25 - 2385121 CTTAAGGTCACAGATGCTGCAGCCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2396747 25 + 4274983 CTTAAGGTCACAGATGCTGCAGCCA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28608155 23 + 49145316 C-TAAGGTCATAGATACTGCAG-CA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5460781 25 + 8899380 CTTAAGGTCATAGATACTGCAGCCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1666006 25 - 2680843 CTTAAGGTCATAGATACTGCAGCTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 411911 25 - 4471408 CTTAAGGTCATAGATACTGCAGCCA i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111144944 24 - 145441459 CTTAAAGTCACATGTAC-ACATCCT i mm10.chr7 C 0 C 0 s canFam3.chr1 4659722 25 - 122678785 CTTAAGTCCACAGGTATTGCCAcca i canFam3.chr1 C 0 I 1550 s dasNov3.JH563638 397747 25 + 643850 CTTAAGGTCACAGACATTGCAACCA i dasNov3.JH563638 M 1598 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5536087 17 + 5549422 I a score=3967428.000000 s hg38.chr19_GL383574v1_alt 131609 350 + 155864 CTGCCAGGTTTCCACAAGCCAGTCACCTTTCAGGTGGAGAAGTAGCTTGCTATAGCAGCCAGTTTCTCGAGTTTGCGCG------ACAGTGCCACTGGAACAATGGCTCATTCATGTCAGATTTCCAGAGAGTTGGGCAGCACACT-------TGtga----------gaatcca---------------------------gctgtgaacaagccattgctgtctttaggagcttatgtgccaggtggtaaagtgtacatatgcaaataaaatggtaagatgattgcaagttgtcatgaagataagacagcattgtaggggtgaggtgaccctagattagacaggttggctgcagaaggcttctctgagggtgtaacacttgttttgagagctaaagga s panTro5.chr19 36199229 350 + 61309027 CTGCCAGGTTTCCACAAGCCAGTCACCTTTCAGGTGGAGAAGTAGCTTGCTATAGCAGCCAGTTTCTCGAGTTTGCACG------ACAGTGCCACTGGAACAATGGCTCATTCATGTCAGATTTCCAGAGAGTTGGGCAGCACACT-------TGtga----------gaatcca---------------------------gctgtgaacaagccattgctgtctttaggagcttatgtgccaggtggtaaggtgtacatatgcaaataaaatggtaagatgattgcaagttgtcatgaagataagacagcattgtaggggtgaggtgaccctagattagacaggttggctgcagaaggcttctctgagggtgtaacgcttgttttgagagctaaagga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39943445 350 + 64411610 CTGCCAGGTTTCCACAAGCCAGTCACCTTTCAGGTGGAGAAGTAGCTTGCTATAGCAGCCAGTTTCTCGAGTTTGCACG------ACAGTGCCACTGGAACAATGGCTCATTCATGTCAGATTTCCAGAGAGTTGGGCAGCACACT-------TGtga----------gaatcca---------------------------gctgtgaacaagccattgctgtctttaggagcttatgtgccaggtgataaggtgtacatatgcaaataaaatggtaagatgattgcaagttgtcatgaagataagacagcattgtaggggtgaggtgaccctagattagacaggttggctgcagaaggcttctctgagggtgtaacgcttgttttgagagctaaagga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6355165 350 - 8369475 CTGCCAGGTTTCCACAAGCCAGTCACCTTTCAGGTGGAGAGGTAGCTTGCTGTAGCAGCCAATTTCTCGAGTTTGCACG------AAAGTGCCACTGGAACAATGGCTCATTCATGTCAGATTTCCAGAGAGTTGGGCAGCACACT-------TGtga----------gaatcca---------------------------gctgtgaacaagccattgctgtctttaggagcttatgtgccaggtggtaaggtgtacttatgcaaataaaatggtaagatgattgcaagttgtcatgaagataagacagcattgtaggggtgaggtgaccctagattagacaggttggccgcagaaggcttctctgagggtgtaacacttgttttgagagctaaagga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63952662 350 - 106955855 CTGCCAGGGTTCCACAAGCCAGTCACCTTTCAGGTGGAGAGGTAGCTTGCTATAGCAGCCAGTTTCTTGAGTTTGCACG------ACAGTGCCACTGGAACAATGGCTCATTCATGTCAGATTTCTAGAGAGTTGGGCAGCACACT-------TGTGA----------GAATCTA---------------------------GCTGtgaacaagccattgctgtctttaggagcttatgtgccaggtggtaaggtgtacatatgcaaataaaatggtaggatgattgcaagttgttatgaagacaagacagcattgtaggggtgaggtgaccctagattagacaggttggctgcagaaggcttctctgagggtgtaacacatgttttgagagctaaagga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30268025 350 + 53671032 CTGCCAGGTTTCCACAAGCCAGTCACCTTTCAGGTGGAGAGGTAGCTTGCTATAGCAGCCAATTTCTCAGGTTTGCACG------ACAGTGCCACTGGAACAATGGCTCATTCATGTCAGATTTCCAGAGAGTCGGCCAGCACACT-------TGGga----------gaatcca---------------------------gctgtgaacaagccattgctgtctttaggagcttatgtgccaggtggtaaggtgtacatatgcaaataaaatggtaagatgattgcaagttgtcatgaagacaagacagcattgtaggggggaggtgaccctagattagacagattggctgtggaaggcttctctgagggtgtaacacttgtttttagagctaaagga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34721945 350 + 59248254 CTGCCAGGTTTCCACAAGCCAGTCACCTTTCAGGTGGAGAGGTAGCTTGCTATAGCAGCCAATTTCTCAGGTTTGCACG------ACAGTGCCACTGGAACAATGGCTCATTCATGTCAGATTTCCAGAGAGTCGGCCAGCACACT-------TGCga----------gaatcca---------------------------gctgtgaacaagccattgctgtctttaggagcttatgtgccaggtggtaaggtgtacatatgcaaataaaatggtaagatgattgcaagttgtcatgaagacaagacagcattgtaggggggaggtgaccctagattagacagattggctgtggaaggcttctctgagggtgtaacacttgtttttagagctaaagga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4594311 350 - 13342542 CTGCCAGGTTTCCACAAGCCAGTCACCTTTCAGGTGGAGAGGTAGCTTGCTATAGCAGCCAATTTCTCAGGTTTGCACG------ACAGTGCCACTGGAACAATGGCTCATTCATGTCAGATTTCCAGAGAGTCGGCCAGCACACT-------TGCGA----------GAATCCA---------------------------GCTGtgaacaagccattgctgtctttaggagcttatgtgccaggtggtaaggtgtacatatgcaaataaaatggtaagatgattacaagttgtcatgaagacaagacagcattgtaggggggaggtgaccctagattagacagattggctgtggaaggcttctctgagggtgtaacacttgtttttagagctaaagga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5519188 350 + 7714307 CTGCCAGGTTTCCACAAGCCAGTCACCTTTCAGGTGGAGAGGTAGCTTGCTATAGCAGCCAATTTCTCAGGTTTGCACG------ACAGTGCCACTGGAACAATGGCTCATTCATGTCAGATTTCCAGAGAGTCGGCCAGCACACT-------TGCGA----------GAATCTA---------------------------GCTGTGAACAAGCCATTGCTGTCTTTAGGAGCTTATGTGCCAGGTGGTAAGGTGTACATATGCAAATAAAATGGTAAGATGATTGCAAGTTGTCATGAAGACCAGACAGCATTGTAGCggggaggtgaccctagattagacagattggctgtggaaggcttctctgagggtgtaacacttgtttttagagctaaagga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29322191 350 + 50890351 CTGCCAGGTTTCCACAAGCCAGTCACCTTTCAGGTGGAGAGGTAGCTTGCTATAGCAGCCAATTTCTCAGGTTTGCACG------ACAGTGCCACTGAAACAATGGCTCATTCATGTCAGATTTCCAGAGACTCGGCCAGCACACT-------TGCga----------gaatcca---------------------------gctgtgaacaagccattgctgtctttaggagcttatgtgccaggtggtaaggtgtacatatgcaaataaaatggtaagatgattgcaagttgtcatgaagacaagacagcattgtaggggggaggtgaccctagattagacagattggctgtggaaggcttctctgagggtgtaacacttgtttttagagctaaagaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 954859 350 - 2385121 CTGCCAGGTTTCCACAAGCCAGTCACCTTTCAGGTGGAGAGGTAGCTTGCTATAGCAGCCAATTTCTCAGGTTTGCACG------ACAGTGCCACTGGAACAATGGCTCATTCATGTCAGATTTCCAGAGAGTCGGCCAGCACACT-------TGCga----------gaatcta---------------------------gctgtgaacaagccattgctgtctttaggagcttatgtgccaggtggtaaggtgtacatatgcaaataaaatggtgagatgattgcaagttgtcatgaagacaagacagcattgtaggggggaggtgaccctagattagacagattggctgtggaaggcttctctgagggtgtaacacttgtttttagagctaaagga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2396772 350 + 4274983 CTGCCAGGTTTCCACAAGCCAGTCACCTTTCAGGTGGAGAGGTAGCTTGCTATAGCTGCCAATTTCTCAGGTTTGCACG------ACAGTGCCACTGGAACAATGGCTCATTCATGTCAGATTTCCAGAGAGTCGGCCAGCACGCT-------TGCAA----------GAATCCA---------------------------GCTatgaacaagccattgctgtctttaggagcttgtgtgccaggtggtaaggtgtacatatgcaaataaaatggtaagatgattgcaagttgtcataaagacgagacagcgttgtaggggggaggtgaccctagattagacaggttggctgtggaaggcttctctgagggtgtaacacttgtttttagagctaaagga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28608178 346 + 49145316 CTGCCAGGTTTCCACAGGCCAGTCACCTTTCAGGTGGAGAGGTAGCTTGCCACAGGAGCCAATTTCTCGGGTTTGCACC------ACAGTACCACTGGAACAATGGTTCATTCGTGTCAGATTTCCAGGGAGTCGGCCAGCACACT-------TGGga----------ggatcca---------------------------gctatgaacaagccactgctgtttttaggagcttatatgccaagtggtaaggtgtacatgtgcaaat----tggtaagatgattgcaagttgtcatgaaggcaagacagcattgtaggggtgaggtgaccctagtttagacaggttggctgtggaaggcttctctgagggtatagcacttgttttgagagctaaagaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5460806 346 + 8899380 CTACCAGGTTTCCACAGGCCAGTCACCTTTCAGGTGGAGAGGTAGCTTGCCATAGGAGCCAATTTCTCAGGTTTGCACC------ACAGTACCACTGGAACAATGGCTCATTCATGTCAGATTTCCAGAGAGTCGGCCAGCACACT-------TGGGA----------GGATCCA---------------------------GCTATGAACAAGCCACTGCTGTTTTTAGGAGCTTATGTGCCAGGTGGTAAGGTGTACATGTGCAAAT----TGGTAAGATGATTGCAAGTTGTCATGAAGGCAAGACAACATTGtagggttgaggtgaccctagtttagacaggttggctgtggaaggcttctctgtgggtgtagctcttgttttgagagctaaagga i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1666031 345 - 2680843 CTGCCAGGTTTCCACAGGCTAGTCACCTTTCAGGTGGAGAGGTAGCTTGCCATAGGAGCCAATTTCTCGGGTTTGCACC------ACAGTACCACTGGAACAATGGCTCATTCATGTCAGATTTCCAGAGAGTCGGCCAGCACACT-------TGGga----------ggatcca---------------------------gctatgaacaagccactgctgtttttaggagcttatgtgccaggtggtaaggtgtacatgtgcaaat----tggtaagatgattgcaagttgtcatgaaggcaagacagcattgtaggg-tgaggtgaccctagtttagacaggttggctgtggaaggcttctctgagggtgtagcacttgttttgagagctaaagga i cebCap1.NW_016107633v1 C 0 I 5 s aotNan1.NW_018505377v1 411936 346 - 4471408 CTGCCAGGTTTCCACAGGCCAGTCACCTTTCAGGTGGAGAGGTAGCTTGCCATAGGAGCCAATTTCTCGGGTTTGCACC------ACAATACCACTGGAACAATGGCTCATTCATGTCAGATTTCCAGAGAGTCGGCCAGCACACT-------TGGga----------ggatcca---------------------------gctatgaacaagccactgctgtttttaggagcttatgtgccaggtggtaaggtgtacatgtgcaaat----tggtaagataattgcaagttgtcatgaaggcaagacagcattgtaggggtgaggtgaccctggtttagacaggttggctgtggaaggcttctctaagggtgtagcacttgttttgagagctaaagga i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111144968 332 - 145441459 ATGGCAAGTCTT--CAGATCTGGCACGTTTCAGGT--AGAGGTAACTTGACATAAGAATCGGTTTCTTGCATTTACAAAACTAACACAGT-CCAAATAATCAGTAACTAACTGATGTCAGGTTTCCAGATAGTCTGCCAGCAAACTTGTTGACTGTGT----------GGACCTG---------------------------GCGGTCACAAAGCA--TGCTGTC--------CTTCTGTGCCAGCTGCTGAGGTGTATG-AAGCAAGTGAGATGGCCAGATAATTGGAAGGTGTCAGTAAGAAAAGATCTCACTGT--GGTCAAGGTGACCCTTGTTTCTACAG-TTGACAGGAGAAGGA------------GTGACACTCATTTCAGGAATTACTAGG i mm10.chr7 C 0 C 0 s dasNov3.JH563638 397772 383 + 643850 CTGCCGGGTCATAGCAGATCAGTGGCCAGATGGGTGGAGGGATAGCTTGCCACAGGAGTCAGTTTCCTGGATTTGCA-A------ATAGAGTAAAATAATCAATGGTTCTTGTATTTTGGATTTATGGAGGGTCTGCCGACACact-------tggcaccattgtgctgaagccaagtgtgcttgttcagtgctatgaacaggcagtgaacaagccactgctgttcttaacagtttacatgccagttggtgtgatttatacaagcaaataga---ggaaaataattgctagctgtcattcagacaacacaacattataggagtggagtgaccctagtttaggcaggctagtcagggaaggcctttctgaggaggtgacatttattctgagagctaaatga i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5536087 17 + 5549422 I e canFam3.chr1 4659747 1550 - 122678785 I a score=45493.000000 s hg38.chr19_GL383574v1_alt 131959 9 + 155864 tgaacggga s panTro5.chr19 36199579 9 + 61309027 tgataggga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39943795 9 + 64411610 tgataggga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6355515 9 - 8369475 cgataggga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63953012 9 - 106955855 tgatagaga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30268375 9 + 53671032 tgataggga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34722295 9 + 59248254 tgataggga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4594661 9 - 13342542 tgataggga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5519538 9 + 7714307 tgataggga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29322541 9 + 50890351 tgataggga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 955209 9 - 2385121 tgataggga i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2397122 9 + 4274983 tgataggga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28608524 7 + 49145316 -gataggg- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5461152 6 + 8899380 -gata-gg- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 412282 7 - 4471408 -gatagag- i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111145300 7 - 145441459 --GTAGGGG i mm10.chr7 C 0 I 1 s dasNov3.JH563638 398155 6 + 643850 taataa--- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5536087 17 + 5549422 I e canFam3.chr1 4659747 1550 - 122678785 I e cebCap1.NW_016107633v1 1666376 5 - 2680843 I a score=1183944.000000 s hg38.chr19_GL383574v1_alt 131968 105 + 155864 ggagcatcatgagtaggagg------gaggcaggagctttctggata-gaggcagcagcgtgtgtaaagagct-----------------tggggcactagaagaactggaagataaatggtgtgactg s panTro5.chr19 36199588 105 + 61309027 ggagcatcatgagtaggagg------gaggcaggagctctctggata-gaggcagcagcatgtttaaagagct-----------------tggggcactagaagaactggaagataaatggtgtgactg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39943804 105 + 64411610 ggagcatcatgagtaggagg------gaggcaggagctctctggata-gaggcagcagcatgtgtaaagagct-----------------tggggcactagaagaactggaagataaatggtgtgactg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6355524 105 - 8369475 ggagcatcatgagtaggagg------gaggcaggagctttctggata-gaggcagcagcatgtgtaaagagct-----------------tggggcactagaagaactggaagataaatggtgtgactg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63953021 105 - 106955855 ggagcatcatgagtaggagg------gagccaggagctttctggata-gaggcagcagcatgtgtaaagagct-----------------tggggcactagaagaactggaagatgaatggtgtgactg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30268384 105 + 53671032 ggagcatcatgagtaggtgg------gaggcaggagatttctggata-gaggcagcagcatgtgcaaagagct-----------------tggggcactagaagaactggaagatgaatggtgtgactg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34722304 105 + 59248254 ggagcatcatgagtaggtgg------gaggcaggagatttctggata-gaggcagcagcatgtgcaaagagct-----------------tggggcactagaagaactggaagatgaatggtgtgactg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4594670 105 - 13342542 ggagcatcatgagtaggtgg------gaggcaggagatttctggata-gaggcagcagcatgtgcaaagagct-----------------tggggcactagaagaactggaagatgaatggtgtgactg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5519547 105 + 7714307 ggagcatcatgagtaggtgg------gaggcaggagctttctggata-gaggcagcagcatgtgcaaagagct-----------------tggggcactagaagaactggaagatgaatggtgtgactg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29322550 105 + 50890351 ggagcatcatgagtaggtgg------gaggcaggagctttctggata-gaggcagcagcatgtgcaaagagct-----------------tggggcactagaagaactagaagatgaatggtgtgactg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 955218 122 - 2385121 ggagcatcatgagtaggtgg------gaggcaggagctttctggata-gaggcagcagcatgtgcaaagagcttggggcactagaagaactggggcactagaagaactggaagatgaatggtgtgactg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2397131 105 + 4274983 ggagcatcatgagtaggtgg------gaggcaggagctttctggata-gaggcagcagcatgtgcaaagagct-----------------tggggcactagaagaactggaagatgaatggtgtgactg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28608531 105 + 49145316 ggagcatcatgagtaggagg------gaggcaagagctttctggata-gaagcagctgcatatgtaaagagct-----------------tggggcattagaagaactggaagatgaatggtgttactg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5461158 103 + 8899380 ggagcgtcatgagtaggagg------gaggcaggagctttctggata-gaagcagctgc--atgtaaagagct-----------------tggggcactagaagaactggaagatgaatggtgtgactg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1666381 105 - 2680843 ggagcatcatgagtaggagg------gaggcaggacctttctggata-gaagcagctgcatgtgtaaagagct-----------------tggggcactagaagaactggaagatgaatggtgtgactg i cebCap1.NW_016107633v1 I 5 C 0 s aotNan1.NW_018505377v1 412289 105 - 4471408 ggagcatcatgaataggagg------gaggcaagagctctctggata-gaagcagctgcatgtgtaaagagct-----------------tggggcactagaagaactggaagatgaatggtgtgactg i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111145308 100 - 145441459 AGGGGATGA-GAATAGGAGGCTAGGAGGGGTAACAGCTTCCTAGA-A-GAGGCTCCAAC-TGTACAAAGCACT-----------------AGGTGCTCTGAAAGAACT---AGGCACATGG-----CTA i mm10.chr7 I 1 C 0 s dasNov3.JH563638 398161 105 + 643850 ggagcattatacctatgagg------aagggaagagctttccagataggagggaatagc-tgtgcaaagaact-----------------tgatgtgttggaagaactgaaggatgtgcagtatggatg i dasNov3.JH563638 C 0 I 402 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5536087 17 + 5549422 I e canFam3.chr1 4659747 1550 - 122678785 I a score=2861340.000000 s hg38.chr19_GL383574v1_alt 132073 281 + 155864 cagaatgatgagtgagact-caggaggcacgacatgaggctggagaggtgggcagggctgtgcaggtctcagtaaggagtttgattttattcaaagtgccagggaccattggaTATAAATTCTTCATAAACTGCATGCAGAAGAGAGA-----TTAAAAGGTTGG---CAGAAAGGAAT--AAAAATGA----AACTGGAGGACCAAGCTGGTAAAAATTGCCCCCAAGGGTCTATCAGAATCCTAACTCACTTAGACCAATAAGATCAGTGGTTACTTATGAACAATACGTTTGA s panTro5.chr19 36199693 281 + 61309027 cagaatgatgagtgagagt-caggaggcacgacatgaggctggagaggtgggcagggCTGTGCAGGTCTCAGTAAGGAGTTTGATTTTATTCAAAGTGCCAGTGACCATTGGATATAAATTCTTCATAAACTGCATGCAGAAGAGAGA-----TTAAAAGGTTGG---CAGAAAGGAAT--AAAAATGA----AACTGGAGGACCAAGCTGGTAAAAATTGCCCCCAAGGGTCTATCAGAATCCTAACTCACTTAGGCTAATAAGATCAGTGGTTACTTATGAACAATACGATTGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39943909 281 + 64411610 cagaatgatgagtgagagt-caggaggcacgacatgaggctggagaggtgggcagggctgtgcaggtctcagtaaggagtttgattttattcaaagtgccagggaccattggaTATAAATTCTTCATAAACTGCATGCAGAAGAGAGA-----TTAAAAGGTTGG---CAGAAAGGAAT--AAAAATGA----AACTGGAGGACCAAGCTGGTAAAAATTGCCCCCAAGGGTCTATCAGAATCCTAACTCACTTAGGCTAATAAGATCAGTGGTTACTTATGAACAATACGATTGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6355629 281 - 8369475 cagaatgatgagtgagagt-caggaggcacgacatgaggctggagaggtgggcagggctgtgcaggtctcagtaaggagtttgattttattcaaagtgccagggaccattggaTATAAATTCTTCATAAACTGCATGCAGAAGAGAGA-----TTAAAAGGTTGG---CAGAAAGGAAT--AAAAATGA----AACTGGAGGACCAAGCTGGTAAAAATTGCCCCCAAGGGTCTATCAGAATCCTAACTCACTTAGGCTAATAAGATCAGTGGTTACTTATGAACAATAGGATTGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63953126 281 - 106955855 cagaatgatgagcgagagt-caggaggcacaacatgaggctggagaggtgggcagggctgtgcaggtctcagtaaggagtttgattttattcaaagtgccagggaccattggGTATAAATTCTTCGTAAACTGCATGCGGAAGAGAGA-----TTAAAAGGTTGG---CAGAAAGGAAT--AAAAATGA----AACTGGAGGACCAAGCTGGTAAAAGTTGCCCCCAAGGGTCTATCAGAATCCTAACTCACTTAGGCTAATAAGATCAGTGGTTACTTATGAACAATACGATTGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30268489 285 + 53671032 cagaatgatgagcgagggt-caggaggcacaacatgaggctggagaggtgggcagggctgtgcgggtctcagtaaggagtttgattttattcgaagtgccggggaccattggGTATAAATTCTTTGTAAACTGCATGCAGGAGAGAGA-----TTAAAAGTTTGG---CAAAAAGGAAT--AAAAATGCAACTAACTGGAGGACCAAACTGGTAAAAATTGCCCCCAAGGATCTATGAGAATCCTAATTCACTTAGGCTAATAAGATCAGTGGTTACTTATGAACAATACAATTGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34722409 285 + 59248254 cagaatgatgagcgagggt-caggaggcacaacatgaggctggagaggtgggcagggctgtgcgggtctcagtaaggagtttgattttattcgaagtgccggggaccattggGTATAAATTCTTTGTAAACTGCATGCAGGAGAGAGA-----TTAAAAGTTTGG---CAAAAAGGAAT--AAAAATGCAACTAACTGGAGGACCAAACTGGTAAAAATTGCCCCCAAGGATCTATCAGAATCCTAATTCACTTAGGCTAATAAGATCAGTGGTTACTTATGAACAATACAATTGA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4594775 285 - 13342542 cagaatgatgagcgagggt-caggaggcacaacatgaggctggagaggtgggcagggctgtgcgggtcttagtaaggagtttgattttattcgaagtgccggggaccattggGTATAAATTCTTTGTAAACTGCATGCAGGAGAGAGA-----TTAAAAGTTTGG---CAAAAAGGAAT--AAAAATGCAACTAACTGGAGGACCAAACTGGTAAAAATTGCCCCCAAGGATCTATCAGAATCCTAATTCACTTAGGCTAATAAGATCAGTGGTTACTTATGAACAATACAATTGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5519652 285 + 7714307 cagaatgatgagcgagggt-caggaggcacaacatgaggctggagaggtgggcagggctgtgcgggtctcagtaaggagtttgattttattcgaagtgccggggaccattggGTATAAATTCTTTGTAAACTGCATGCAGAAGAGAGA-----TTAAAAGGTTGG---CAAAAAGGAAT--AAAAATGCAACTAACTGGAGGACCAAACTGGTAAAAATTGCCCCCAAGGATCTATCAGAATCCTAATTCACTTAGGCTAATAAGATCAGTGGTTACTTATGAACAATACAATTGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29322655 285 + 50890351 cagaatgatgagcgagggt-caggaggcacaacatgaggctggagaggtgggcagggctgtgcgggtctcagtaaggagtttgattttatttgaagtgccggggaccattggGTATAAATTCTTTGTAAACTGCATGCAGAAGAGAGA-----TTAAAAGGTTGG---CAAAAAGGAAT--AAAAATGCAACTAACTGGAGGACCAAACTGGTAAAAATTGCCCCCAAGGGTCTATCAGAATCCTAATTCACTTAGGCTAATAAGATCAGTGGTTACTTATGAACAATACAATTGA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 955340 285 - 2385121 cagaatgatgagcgagggt-caggaggcacaacatgaggctggagaggtgggcagggctgtgcgggtctcagtaaggagtttgattttattcgaagtgccggggaccattggGTATAAATTCTTTGTAAACTGCATGCAGAAGAGAGA-----TTAAAAGGTTGG---CAAAAAGGAAT--AAAAATGCAACTAACTGGAGGACCAAACTGGTAAAAATTGCCCCCAAGGATCTATCAGAATCCTAATTCACTTAGGCTAATAAGATCAGTGGTTACTTATGAACAATACAATTGA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2397236 281 + 4274983 cagaatgatgagcgagggt-caggaggcacaacatgaggctggagaggtgggcagggctgtgcaggtctcagtaaggagtttgattttattcgaagtgccggggaccattggGTATAAATTATTTGTAAACTGCATGCAGAAGAGAGA-----TTAAAAGGTTGG---CAGAAAGGAAT--AAAAATGC----ACCTGGAGGACCAAACTGGTAAAAATTGCCCCCAAGGGTCTACCAGAATCCTAATTCACTTAGGCTAATAAGATCAGTGGTTACTTATGAAGAATACAATTGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28608636 283 + 49145316 cagaatgttgagtgaaggt-caggaggcacaacatggggctggagaggcaggtaggactgtgcaggtctcagtaaggtgtttgattttattctaagtgccagggaccattggaTATAAGTTCTTCATAAACTACATGCAGAAAAGAGA-----TTACAAGGTTGGCAGCAGAAAGGAAT---AAAATGA----AACTGGAGGACCAAGCTGGTAAAAATTGCTCTCCAGGGTCTATCAGAATCGTAACTCACCTAGCCTAAGAAGATCAGTGGTTACTTATGAACAATGCAGTTGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5461261 283 + 8899380 cagaatgatgagtgaaggt-caggaggcacaacatgaggctggagaggcaggcagggctgtggaggtctcagtaaggtgtttgattttattctaagtgCTAGTGACCATTGGATATAAATTCTTCATAAACTACATGCAGAAGAGAGA-----TTAAAAGGTTGGTGGAAGAAAGGAAT---AAAATGA----AACTGGAGGATCAAGCTGGTAAAAATTGCTCTCAAGGGTCTATCAGAATCGTAACTCACCTAGCCTAATAAGATCAGTGGTTACTTACAAACAATACAATTGA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1666486 283 - 2680843 cagaatgatgagtgaaggt-caggaggcacaacttgaggctggagaggcaggcagggctgtgtaggtctcagtaaagtgtttgattttattctaagtgcaagtgaccattggaTATAAATTCTTCATAAACTACATGCAGAAAAGAGA-----TTAAAAGGTTGGTGGCAGAAAGGAAT---AAAATGA----AACTGGAGGACCAAGCTGGTAAAAATTACTCTCAGGGGACTATCAGAATCATAAGTCACCTAGCCTAATTAAATCATTCGTTACTTATGAACAATACAATTGA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 412394 282 - 4471408 cagaatgatgagtgaaggt-caggaggcacaacatgaggctggagaggcagccagggctgtgcaggtctcagtaaggtgtttgattttattctaagtactagagaccattggaTATAAATTCTTCATAAACTACATGCAGAAGAGAGA-----TTA-AAGATTGGCGACAGAAAGGAAT---AAAATGA----AACTAGAGGATCAAGCTGGTAAAAAATGCTCTCAAGAGTCTATCAGAATCGTAACTCACCTAGCCTAATAAGATCAGTGGTTACTTATGAACAATACAATTGA i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111145408 260 - 145441459 GAGAGTGCTGAATGAAGGTACAGGTTA------ATGAGGCTGGAGA-GTGGCCATCAGTGAATGGGTCAT-GTGTGGAGTTTGATTTTACTGTATG------------GTATATGTCAATTCTAAGAAAATTACATACAGAAAAGAGATTTTTTTAAAAAGTTGA---TAGAAAAGAATAAAAAAATGA----AACTA-AGGACAGAGATGGTATAA-TTGTTCT---GAGACTATTAGAA---TAACTTAGCCAAGCT-ATAAGTTTAGTGGTTGTTAATGAAAAATAAGGTTGa i mm10.chr7 C 0 I 4122 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e canFam3.chr1 4659747 1550 - 122678785 I a score=169567.000000 s hg38.chr19_GL383574v1_alt 132354 18 + 155864 AAAGACCTATGAAAAAAC s panTro5.chr19 36199974 18 + 61309027 AAAGACCTATGAAAAAAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39944190 18 + 64411610 AAAGACCTATGAAAAAAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6355910 18 - 8369475 AAAGACCTATGAAAAAAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63953407 18 - 106955855 AAAGACCTACGGAAAAAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30268774 18 + 53671032 AAAGACCTATGAAAAAAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34722694 18 + 59248254 AAAGACCTATGAAAAAAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4595060 18 - 13342542 AAAGACCTATGAAAAAAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5519937 18 + 7714307 AAAGACCTATGAAAAAAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29322940 18 + 50890351 AAAGACCTATGAAAAAAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 955625 18 - 2385121 AAAGACCTATGAAAAAAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2397517 17 + 4274983 AAAGACCTATGAAAAAA- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28608919 18 + 49145316 AAAGACCTAAGAAAAAAC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5461544 18 + 8899380 AAAGACCCAAGAAAAAAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1666769 18 - 2680843 AAAGACCTAAGAAAAAAC i cebCap1.NW_016107633v1 C 0 I 2669 s aotNan1.NW_018505377v1 412676 16 - 4471408 AAAGACCTAAGAAAAA-- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e canFam3.chr1 4659747 1550 - 122678785 I a score=3074707.000000 s hg38.chr19_GL383574v1_alt 132372 347 + 155864 ACGTGAAATTTGGAgtttctctgtctctcatgtttcctgtaagtaattcgctagatatagagactcgattagattttgattcagtattttaggcaaaaatattttttgggtggtactgtgtacttcctattttgtcacaatgataggcatataattatatgtttagttccccactttaatgatgctaaaattaattagtgagttcaggtgtt---atgcctgattccttcatcataaacttctccatcaagtttcaccaaatcattttaacagtgattaataatcattggctagatacactatttcattagagttgcaaaataatagttttcctagcatttcttctttat s panTro5.chr19 36199992 347 + 61309027 ACGTGAAATTTGGAgtttctctgtctctcatgtttcctgtaagtaattcactagatatagagactcgattagattttgattcagtattttaggcaaaaatattttttgggtggtactgtgtacttcctattttgtcacaatgataggcatataattatatgtttagttccccactttaatgatgctaaaattaattagtgggttcaggtgtt---atgcctgattccttcatcataaacttctccatcaagtttcaccaaatcattttaacagtgattaataatcattggctagatacactatttcattagagttgcaaaataatagttttcctagcatttcttctttat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39944208 347 + 64411610 ACGTGAAATTTGGAgtttctctgtctctcatgtttcctgtaagtaattcactagatatagagactcgattagattttgattcagtattttaggcaaaaatattttttgggtggtactgtgtacttcctattttgtcacaatgataggcatataattatatgtttagttccctactttaatgatgctaaaattaattagtgggttcaggtgtt---atgcctgattccttcatcataaacttctccatcaagtttcaccaaatcattttaacagtgattaataatcattggctagatacactatttcattagagttgcaaaataatagttttcttagcatttcttctttat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6355928 347 - 8369475 ACGTGAAATTTGGAgtttctctgtctctcatgtttcctgtaagtaattcgctagatatagagactcgattagattttgattcagtattttaggcaaaaatattttttgggtggtactgtgtacttcctattttgtcacaatgataggcatataattatatgtttagttccccactttaatgatgctaaaattaattagtgggttcaggtgtt---atgcctgattccttcatcataaacttctccatcaagtttcaccaaatcattttaacagtgattaataatcattggctagatacactatttcattagagttgcaaaataatagttttcctagcatttctcctttat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63953425 347 - 106955855 ACGTGAAATTTGGAgtttccctgtctctcatgtttcctgtaagtaatttgctagatatagagactcgattagattttgattcagtattttaggcaaaaatattttttgggtggtactgtgtacttcctattttgtcacaataataggcatataattatatgtttagttccccactttaatgatgctaaaattaattagtgggctcaggtgtt---atacctgattccttcatcataaacttctccatcaagtttcaccaaatcattttaacagtgattaataatcattggctagatacagtatttcattagagttgcaaaataatagttttcCTACCacctcatatatat i nomLeu3.chr10 C 0 I 1101 s rheMac8.chr19 30268792 347 + 53671032 ACGTGAAATTTGGAgtttctctgtctctcatgtttcctataagttattcgctagatgtagagactcaattagattttgattcagtattttaggcaaaaatattttttgggtggtgctatgtgcttcctattttgtcacaatgataggcatataattatatgtttagttccccaccttaatgatgataaaagtaattagtgggttcgggtgtt---atgcctgatttcttcatcataaacttccccatcaagtttcaccgtatcattttaacagtgattaataatcattgactagatacactatttcattagagttgcaaaataatagttttcctagcatttcttctatat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34722712 347 + 59248254 ACGTGAAATTTGGAgtttctctgtctctcatgtttcctataagttattcgctagatatagagactcaattagattttgattcagtattttaggcaaaaatattttttgggtggtgctatgtgcttcctattttgtcacaatgataggcatataattatatgtttagttccccaccttaatgatgctaaaagtaattagtgggtttgggtgtt---atgcctgattccttcatcataaacttccccatcaagtttcaccgtatcattttaacagtgattaataatcattgactagatacactatttcattagagttgcaaaataatagttttcctagcatttcttctatat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4595078 347 - 13342542 ACGTGAAATTTGGAgtttctctgtctctcatgtttcctataagttattcgctagatatagagactcaattagattttgattcagtattttaggcaaaaatatttttcgggtggtgctatgtgcttcctattttgtcacaatgataggcatataattatatgtttagttccccaccttaatgatgctaaaagtaattagtgggttcgggtgtt---atgcctgattccttcatcataaacttccccatcaagtttcaccgtatcattttaacagtgattaataatcattgactagatacactatttcattagagttgcaaaataatagttttcctagcatttcttctatat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5519955 347 + 7714307 ACGTGAAATTTGGAgtttctctgtctctcatgtttcctgtaagttattcgctagatatagagactcaattagattttgattcagtattttaggcaaaaatattttttgggtggtgctatgtgcttcctattttgtcacaatgataggcatataattatatgtttagttccccaccttaatgatgctaaaagtaattagtgggttcaggtgtt---atgcctgattccttcatcataaacttccccatcaagtttcaccgtatcattttaacagtgattaataatcattgactagatacactatttcattagagttgcaaaataatagttttcttagcatttcttctatat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29322958 347 + 50890351 ATGTGAAGTTTGGAgtttctctgtctctcatgtttcctataagttattcgctagatatagagactcgattagattttgattcagtattttaggcaaaaatattttttgggtggtgctatgtgcttcctattttgtcacaatgataggcttataattatatgtttagttccccaccttaatgatgctaaaagtaattagtgggttcaggtgtt---atgcctgattccttcatcataaacttccccatcaagtttcaccgtatcattttaacagtgattaataatcattgactagatacactatttcattagagttgcaaaataatagttttcctagcatttcttctatat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 955643 347 - 2385121 ACGTGAAATTTGGAgtttctctgtctctcatgtttcctgtaagttattcgctagatatagagactcaattagattttgattcagtattttaggcaaaaatattttttgggtggtgctatgtgcttcctattttgtcacaatgataggcatataattatatgtttagttccccaccttaatgatgctaaaagtaattagtgggttcaggtgtt---atgcctgattccttcatcataaacttccccatcaagtttcaccgtatcattttaacagtgattaataatcattgactagatacactatttcattagagttgcaaaataatagttttcttagcatttcttctatat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2397534 347 + 4274983 ACATGAAATTTGGAgtttctctgtctctcatgtttcctataagttattcgctagatatagagactcgattagattttgattcagtattttaggcaaaaatattttttgggtggtgctgtgtgcttcctattttgtcacaatgataggcatataattatgtgtttagttccccaccttaatgatgctaaaagtaattagtgggttcaggtgtt---atgcctgattccttcatcataaacttccccatcaagtttcaccgtatcattttaacagtgattaataatcattgactagagacactatttcattagagttgcaaaataatagttttcctagcatttcttctatat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28608937 350 + 49145316 ATGTGAAATTTGGGgtttctctgtctctcatgtttcctataagttatttgctacatagagagactagattagattttgattcagtattttaggcaaaaatactttttgggtggtactgcgtacttccTGCTTTGTCACAGCGATAGGCATCTAATTATGTATCTAGTTTCCCATTGTAATGACAGTAAATGTAATTAGTGGGTTCAGATGTTATCATGCCTGATTCCTTCATCATAAACTTCATCATCCAGTTTCACCGAATCattttaacagtgattaataataattggctagctccactatttcattagagttgtaaaataatagttttcatagcatttcttctgtat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5461562 350 + 8899380 TTGTGAAATTTGGAgtttctctgtctctcatgtttcctataagttatttgctagatacagagacttgattagactttgattcagtattttaggcaaaaatactttttgggtggtactgtgtacttcctattttgtcacaacgataggcatataattatgtatctagtttcccactgtaatgacagtaaacataattagtgagttcagatgttatcatgcctgattcctttatcataaacttccccatcaagtttcaccgaatcattttaacaatgatttataatcattggctggatccactatttcattagagttgcaaaataatagttttcatagcatttcttctgtat i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 412692 350 - 4471408 ATGTGAAATTTGGAgtttgtctgtctctcatgtttcctataagttatttgctagatacagagacttgattagattttgattcagtattttaggcaaaaatactttttgagtggtactgtgtacttcctattttgtcacaacagtaggcatataattatgtatctagtttcccactgtaatgacagtaaacataattagtgggttcagatgttatcatgcctgattccttcatcataaacttccccatcaagtttcaccaaatcattttaacaataattaataatcattggctagatccactatttcattagagttgcaaaataatagttttcatagcatttcttctgtat i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e canFam3.chr1 4659747 1550 - 122678785 I e cebCap1.NW_016107633v1 1666787 2669 - 2680843 I a score=2789121.000000 s hg38.chr19_GL383574v1_alt 132719 408 + 155864 ttattggctaattttctttgattaagc-------actttcctaaatgg-agtattc---aaaaaaaaac---tatataaacaggaaaagcaggataaatgcttgatttcaccccccccccccacccccagcagttttcagaacaatagcttggtgccttaacacctccacagagagatgaccaatggaatttttcttaatatCATTATTGACTCACTttttttattgtggtagaatatgcataacacaaaatttacagttttaaccatttttat-tatacatttcagtggca-taagtacattaacaatgttgtgcagccatcaccaccatcca-tctccagaactttttcaacatcccaaactgaaagtcttggccaggcatggtggctcatgcctgtaaacccagcactttgggaggctgaag s panTro5.chr19 36200339 409 + 61309027 ttattggctaattttctttgattaagc-------actttcctaaatgg-agtattc---caaaaaaaac---tatattaacaggaaaagcaggataaatgcttgatttcaccccccccccccacccccagcagttttcagaacaatagcttggtgccttaacacctccacagatagatgaccaatggaatttttcttaatatCATTATTGACTCATTttttttattgtggtagaatatgcataacacaaaatttacagttttaaccatttttatgtatacatttcagtggca-taagtacattaacaatgttgtgcaaccatcaccaccatcca-tctccagaactttttcaacatcccaaactgaaagtcttggccaggcatggtggctcatgcctgtaatcccagcactttgggaggctgaag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39944555 404 + 64411610 ttattggctaattttctttgattaagc-------actttcctaaatgg-agtattc---caaaaaaaac---tatataaacaggaaaagcaggataaatgcttgatttca-----cccccccacccccagcagttttcagaacaatagcttggtgccttaacacctccacagatagatgaccaatggaatttttcttaatatCATTATTGACTCATTttttttattgtggtagaatatgcataacacaaaatttacagtttgaaccatttttatatatacatttcagtggca-taagtacattaacaatgttttgcaaccatcaccaccatcca-tctccagaactttttcaacatcccaaactgaaagtcttggccaggcatggtggctcatgcctgtaatcccagcactttgggaggctgaag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6356275 402 - 8369475 ttattggctaattttctttgattaagc-------actttcctaaatgg-agtattc---caaaaaaaac---tatataaacaggaaaagcaggataaatgcttgatttca-----cccccccacccccagcagttttcagaacaatagcttggtgccttaacacctccacagatagatgaccaatggaatttttcttaatatCATTATTGACTCA-Tttttttattgtggtagaatatgcataacacaaaatttccagttttaaccgtttttatatatacatttcagtggca-taagtacattaacaatgttgtgcaaccatcaccaccatcca-tctccagaactttttcaacatcccaaactgaaagtcttggccaggcatgttggctcatgcctgtaat-ccagcactttgggaggctgaag i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30269139 393 + 53671032 ttatgggctagttttctttgattaagc-------tcttttctaaatgg------------aaaaaaaac---tatataaacaggaaaagcagtataaatacttgatttca-----cccccacatccccaacagttttcagaacaatagcttggtgccttaacacctccacagataggtgaccaatggaatttttcttagtatCATTTTTGACTCATGttttttattgtggtagaatatgcataacataaaatttacagttttaacaatttttatgtatacatttcagtggcattaagtacattaacagtg---tgcaaccatcaccaccatcca-tctccagaac-ttttcaacatcccaaactgaaagtcttggccaggcacggtggctcatgctggtaatcccagcactttgggaggctgaag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34723059 393 + 59248254 ttatgggctagttttctttgattaagc-------tcttttctaaatgg------------aaaaaaaac---tatagaaacaggaaaagcagtataaatacttgatttca-----cccccacatccccaacagttttcagaacaatagcttggtgccttaacacctccacagataggtgaccaatggaatttttcttagtatCATTTTTGACTCATGttttttattgtggtagaatatgcataacataaaatttacagttttaacaatttttatgtatacatttcagtggcattaagtacattaacagtg---tgcaaccatcaccaccatcca-tctccagaac-ttttcaacatcccaaactgaaagtcttggccaggcacggtggctcatgctggtaatcccagcactttgggaggctgaag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4595425 393 - 13342542 ttatgggctagttttctttgattaagc-------tcttttctaaatgg------------aaaaaaaac---tatataaacaggaaaagcagtataaatacttgatttca-----cccccacatccccaacagttttcagaacaatagcttggtggcttaacacctccacagataggtgaccaatggaatttttcttagtatCATTTTTGACTCATGttttttattgtggtagaatatgcataacataaaatttacagttttaacaatttttatgtatacatttcagtggcattaagtacattaacagtg---tgcaaccatcaccaccatcca-tctccagaac-ttttcaacatcccaaactgaaagtcttggccaggcacggtggctcatgctggtaatcccagcactttgggaggctgaag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5520302 395 + 7714307 ttatgggctagttttctttgattaagc-------tcttttctaaatgg-aa---------aaaaaaaac---tatataaacaggaaaagcagtataaatacttgatttca-----cccccacatccccaacagttttcagaacaatagcttggtgccttaacacctccacagataggtgaccaatggaatttttcttagtatCATTTTTGACTCATGttttttattgtggtagaatatgcataacataaaatttacagttttaaccatttttatgtatacatttcagtggcattaagtacattaacagtg---tgcaaccatcaccaccatcca-tctccagaac-ttttcaacatcccaaactgaaagtcttggccaggcacggtggctcatgccggtaatcccagcactttgggaggctgaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29323305 389 + 50890351 ttatgggctagttttctttgattaagc-------tcttttctaaatgg-aa---------aaaaaaaat---gatata------aaaggcagtgtaaatacttgatttca-----cccccacatccccaacagttttcggaacaatagcttggtgccttaacacctccacagataggtgacccatggaatttttcttagtatCATTTTTGACTCATGttttttattgtggtagaatatgcataacataaaatttacagttttaaccatttttatgtatacatttcagtggcattaagtccattaacagtg---tgcaaccatcaccaccatcca-tgtccagaac-ttctcaacatcccacactgaaagtctCggccgggcacggtggctcctgccggtaatcccagcactttgggaggctgaag i chlSab2.chr6 C 0 I 2956 s manLeu1.NW_012102454v1 955990 396 - 2385121 ttatgggctagttttctttgattaagc-------tcttttctaaatggaaa---------aaaaaaaac---tatataaacaggaaaagcagtataaatacttgatttca-----cctccacatccccaacagttttcagaacaatagcttggtgccttaacacctccacagataggtgaccaatggaatttttcttagtatCATTTTTGACTCATGttttttattgtggtagaatatgcataacataaaatttacaattttaaccatttttatgtatacatttcagtggcattaagtacattaacagtg---tgcaaccatcaccaccatcca-tctccagaac-ttttcaacatcccagactgaaagtcttggccaggcacggtggctcatgccggtaatcccagcactttgggaggctgaag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2397881 400 + 4274983 ttatgggctaattttctttgattaagc-------tcttttctaaatgg-aatattc---caaaaaaaac---tatataaacaggaaaagcagtataaatgcttga-ttca-----cccccacatccccaacagttttcaagacaatagcttggtgccttaacacctccacagataggtgaccaatggaatttttcttagtatCATTTTTGACTCATGttttttattgtggtagaatatgcataacataaaatttacagttttaaccatttttatgtatacatttcagtggcattaagtacattaatagtg---tgcaaccatcaccaccatcga-tctccagaac-ttttcaacatcccaaactgaaagtcttggccaggcatggtggctcatgccggtaatcccagcactttgggaggctgaag i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28609287 411 + 49145316 ttattagctaattttctttgattaagcacttagcactttcctaaatgg-agtatt----aaaaaaaaac---tatataaacaagaaaagcaggataaatgcttgatttca------acccccccccgcaacaatttttagaataatagcttggtgccttaacacctccacagatagatgaccaacggaatttctcttagtgtcattatggattcaTGttttttattgtggtagaatatacataacgcaaaatttacagttttaaccatttttaagtatacatttcagtggcattaagtacattaacaatgttgtacaaccgacaccaccatccattctccagagctttttcaacatcccaaactgaaagtcttggccaggtaccgtgggttatgcctgtaaccccagccctttgggaggctgagg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5461912 417 + 8899380 ttattagctaattttctttgattaagcatttagcactttcctaaatgg-agtattt-aaaaaaaaaaacacacatataaacaagaaaagcaggataaatgcttgatttca-----cacccccccaccaaacaatttttagaataatagcttggtgccttaacacctccacagatagatgactaatggaatttctcttagtgtcattttggactcat-ttttttattgtggtagaatatacataacccaaaatttgcagttttaacaatttttaagtatgtatttcagtggcattaagtaaattaacaatgttgtacaaccgacaccaccatccattctccagagctttttcaacgtcctaaactgaaagtcttggccaggtaccgtggcttatgcctgtaatcccagcgctttgggaggctgagg i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 413042 416 - 4471408 ttattagctaattttctttgattaagcacttagaactttcctaaatgg-agtatttaaaaaaaaaaaac---tatataaacaagaaaagcaggataaatgcttgatttca-----cccccctcccgctaacaatttttagaataatagcttggtgccttaacacctccacagatagatgaccaatggaatttctcttagtgtcattatggacttatAttttttattgtggtagaacatacgtaacacaaaatttacagttttaaccatttttaagtatacatttcagtggcattaagtacattaacaatgttgtataactgacaccacaatccattctccagagctttttcaacatcccaaactgaaagtcttggccaggtaccgtggcttatgcctgtaaccccagccctttgggaggctgagg i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e canFam3.chr1 4659747 1550 - 122678785 I e cebCap1.NW_016107633v1 1666787 2669 - 2680843 I e nomLeu3.chr10 63953772 1101 - 106955855 I a score=4616252.000000 s hg38.chr19_GL383574v1_alt 133127 768 + 155864 cgggtggatcacctgaggtcagaagtttgagaccagcctggccaacatggtgaa-------------accctgtctctgctaaaaatacaaaaattagccagatgtggtggcataagcctgcagtcccagctactt----gggaggctgaggcacg-agaattgcttgaaccc--aggaggc-agaggttacag-taaaccgaaattgtgccactagtactccagcctgggtgac-agagcaagactccatctcaaaaaaaaaaaaaaaaaaaaaaa--gtcttgcctattaaacagtaactccccattttccccttctctcagctcctgg-gcacaacctctcttctactttttgtccctaaaaatttgactattttaggcaccccata-tatatggaatcacacagtatttgtcctttagtgtctggcatctt------agcagagtatctccaaggttcatccatgttggagcatgttattagaatttccttcatt-aattttttttttttattgac---agggt----ctctgtcacccaggctggagtgcagtggtgcagtcaagcttactgcagcctcagatgcctgggttcaagtgatcctcatgcctcagcctcccaagtagctggaactacaagtgtgcaccataatgccaagctaatttttaaattttttgtagagacagggtctcgccatgttgcccaggctagtctcaaactggcctcaagcgatcttcctacctcagcctcccaaagtgctaggattacaggcatgagccactgcttccagcctttcttccttttt s panTro5.chr19 36200748 762 + 61309027 cgggtggatcacctgaggtcagaagtttgagaccagcctggccaacatggtgaa-------------accctgtctctgctaaaaatacaaaaattagccagatgtggtggcataagcctgcagtcccagctactt----gggaggctgaggcatg-agaattgcttgaaccc--aggaggc-agaggttacag-taaaccgaaattgtgccactagtactccagcctgagtgac-agagcaagactccatctc------aaaaaaaaaaaaaaaaa--gtcttgcctgttaaacagtaactccccattttccccttctctcagctcctgg-gcacaacctctcttctactttttgtccctaaaaatttgacta-tttaggcaccccata-tatatggaatcacacagtatttgtcctttagtgtctggcatctt------agcagagtatctccaaggttcatccatgttggagcatgttattagaatttccttcattaaattttttttttttattgac---agggt----ctctgtcacccaggctggagtgcagtggtgcagtcaagctcactgcagcctcagatgcctgggttcaagtgatcctcatggctcagcctcccaagtagctggaactacaagtgtgcaccataatgccgagctaatttttaaattttttgtagagacagggtctcgctatgttgcccaggctagtcttaaactggcctcaagcaatcttcctacctcagcctcccagagtgctaggattacaggcatgagccactgcttccagcctttcttccttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39944959 763 + 64411610 caggtggatcacctgaggtcagaagtttgagaccagcctggccaacatggtgaa-------------accctgtctctgctaaaaatacaaaaattagccagatgtggtggcataagcctgcagtcccagctactt----gggaggctgaggcatg-agaattgcttgaaccc--aggaggc-agaggttacag-taaaccgaaattgtgccactagtactccagcctgagtgac-agagcaagactccatctc-----aaaaaaaaaaaaaaaaaa--gtcttgcctgttaaacagtaactccccattttccccttctctcagctcctgg-gcacaacctctcttctactttttgtccctaaaaatttgactattttaggcaccccata-tatatggaatcacacagtatttgtcctttagtgtctggcatctt------agcagagtatctccaaggttcatccatgttggagcatgttattagaatttccttcatt-aaatttttttttttattgac---agggt----ctctgtcacccaggctggagtgcagtggtgcagtcaagctcactgcagcctcagatgcctgggttcaagtgatcctcatgcctcagcctcccaagtagctggaactacaagtgtgcaccataatgccgagctaatttttaaattttttgtagagacagggtctcgctatgttgcccaggctagtctcaaactggcctcaagcgatcttcctacctcagcctcccagagtgctaggattacaggcatgagccactgcttccagcctttctttcttttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6356677 738 - 8369475 cgggtggatcacctgaggtcagaagtttgagaccagcctggccaacatggtgaa-------------accctgtctctgctaaaaatacaaaaattagccagatgtggtggcataagcctgcagtcccagctactt----gggaggctgaggcatg-agaattgcttaaaccc--aggaggc-agaggttacag-taaaccgaaattgtgccactagtactccagcctgggtgac-agagcaagactccatctc-----aaaaaaaaaaaaaaaaaa--gtcttgcctattaaacagtaactccccattttcccct------------------------tctcttctactttttgtccctaacaatttgactattttaggcaccccata-tatatggaatcacacagtatttgtcctttagtgtctggcatctt------agcagagtatctccaaggttcatccatgttggagcacgttattagaatttctttcatt-aaatttttttttttattgac---agggt----ctctgtcacccaggctggagtgcagtggtgcagtcaagctcactgcagcctcagatgcctgggttcaagtgatcctcatgcctcagcctcccaagtagctggaactacaagtgtgcaccataatgccgagctaatttttaaattttttgtagagac--ggtctcgctatgttgcccaggctagtctcaaactggcctcaagcgatcttcctacttcagcctcccaaagtgctaggattacaggcatgagccactgcttccagcctttcttccttttt i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30269532 755 + 53671032 cgggtggatcacctgaggtcagaagtttgagaccagcctggccaacatggtgaa-------------accctgtctctgctaaaaatacaaaaattagccgaacgtggtggcatgaacctgctattccagctacttttggggaaggttaaggcatgaataattgcttaaaccccaggaaggcaagaggttacagttgaaccaaaattgtgccactagtactccagcctgggcgac-agagcaagacttcatctc-aaaacaaaaaacaaaaaagaaa--gtcttgcctattaaacagtaactcggcattttccccttctctcagctcctggtgaacaacctctcttctactttttgtctcctaaaacttgactgttttaggcacctcata-tatatggaatcacacagtatttgtcctttagtatctggtgtttt------agcagagtgtctccaaggttcatccatgttggagcatgttattagaa-----------------------tttattgac---agggt----ctctgtcacccaggctggagtgcagtggcgcggtcaagctcactgcagcctcatatgcctgggttcaagtgatccacatgcctcagcctcccaagtagctggaactacaaatgtgtaccatcataccaagctaatttttaaattttctgtagagacggggtcttgctatgttgcccaggctagtctcaaactggctccaagcgatcttcctacctcagcctcccaaagtgctaggattacaggtatgagccactgcttccagcctttcttccttttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34723452 746 + 59248254 cgggtggatcacctgaggtcagaagtttgagaccagcctggccaacatggtgaa-------------accctgtctctgctaaaaatacaaaaattagccgaacgtggtggcatgaacctgtagtcccagctactt----gggaggctgaggcata-ataattgcttaaaccc--aggaggc-agaggttacag-tgaaccaaaattgtgccactagtactccagcctgggcgac-agagcaagacttcgtctc-aaaacaaaaaacaaaaaagaaa--gtcttgcctattaaacagtaactcggcattttccccttctctcagctcctggtgaacaacctctcttctactttttgtctcctaaaacttgactgttttaggcacctcata-tatatggaatcacacagtatttgtcctttagtatctggtgtttt------agcagagtgtctctaaggttcatccatgttggagcatgttattagaa-----------------------tttattgac---agggt----ctctgtcacccaggctggagtgcagtggcgcggtcaagctcactgcagcctcatatgcctgggttcaagtgatcctcatgcctcagcctcccaagtagctggaactacaaatgtgtaccatcataccaagctaatttttaaattttctgtagagacggggtcttgctatgttgcccaggctagtctcaaactggctccaagcgatcttcctacctcagcctcccaaagtgctaggattacaggtatgagccactgcttccagcctttcttccttttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4595818 746 - 13342542 cgggtggatcacctgaggtcagaagtttgagaccagcctggccaacatggtgaa-------------accctgtctctgctaaaaatacaaaaattagccgaacgtggtggcatgaacctgtagtcccagctactt----gggaggctgaggcatg-ataattgcttaaaccc--aggaggc-agaggttacag-tgaaccaaaattgtgccactagtactccagcctgggcgac-agagcaagacttcgtctc-aaaacaaaaaacaaaaaagaaa--gtcttgcctattaaacagtaactcggcattttccccttctctcagctcctggtgaacaacctctcttctactttttgtctcctaaaacttgactgttttaggcacctcata-tatatggaatcacacagtatttgtcctttagtatctggtgtttt------agcagagtgtctccaaggttcatccatgttggagcatgttattagaa-----------------------tttattgac---agggt----ctctgtcacccaggctggagtgcagtggcgcggtcaagctcactgcagcctcatatgcctgggttcaagtgatcctcatgcctcagcctcccaagtagctggaactacaaatgtgtaccatcataccaagctaatttttaaattttctgtagagacggggtcttgctatgttgcccaggctagtctcaaactggctccaagcgatcttcctacctcagcctcccaaagtgctaggattacaggtatgagccactgcttccagcctttcttccttttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5520697 746 + 7714307 cgggtggatcacctgaggtcagaagtttgagaccagcctggccaacatggtgaa-------------accctgtctctgctaaaaatacaaaaattagccgaacgtggtggcatgaacctgtagtcccagctactt----gggaggctgaggcatg-agaattgcttaaaccc--aggaggc-agaggttacag-tgaaccaaaattgtgccactagtactccagcctgggcgac-agagcaagacttcgtctc-aaaacaaaaaacaaaaaagaaa--gtcttgcctattaaacagtaactcggcattttccccttctctcagctcctggtgaacaacctctcttctactttttgtctcctaaaacttgactgttttaggcacttcata-tatatggaatcacacagtatttgtcctttagtatctggtgtttt------agcagagtgtctccaaggttcatccatgttggagcatgttattagaa-----------------------tttattgac---agggt----ctctgtcacccaggctggagtgcagtggcgcggtcaagctcactgcagcctcatatgcctgggttcaagtgatcctcatgcctcagcctcccaagtagctggaactacaaatgtgtaccatcatgccaagctaatttttaaattttctgtagagacggggtcttgctatgttgcccaggctagtctcaaactggctccaagcgatcttcctacctcagcctcccaaagtgctaggattacaggtatgagccactgcttccagcctttcttccttttt i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 956386 746 - 2385121 cgggtggatcacctgaggtcagaagtttgagaccagcctggccaacatggtgaa-------------accctgtctctgctaaaaatacaaaaattagccgaacgtggtggcatgaacctgtagtcccagctactt----gggaggctgaggcatg-agaattgcttaaaccc--aggaggc-agaggttacag-tgaaccaaaattgtgccactagtactccagcctgggcgac-agagcaagacttcgtctc-aaaacaaaaaacaaaaaagaaa--gtcttgcctattaaacagtaactcggcattttccccttctctcagctcctggtgaacaacctctcttctactttttgtctcctaaaacttgactgttttaggcacctcata-tatatggaatcacacagtatttgtcctttagtatctggtgtttt------agcagagtgtctccaaggttcatccatgttggagcatgttattagaa-----------------------tttattgac---agggt----ctctgtcacccaggctggagtgcagtggcgcggtcaagctcactgcagcctcatatgcctgggttcaagtgatcctcatgcctcagcctcccaagtagctggaactacaaatgtgtaccatcatgccaagctaatttttaaattttctgtagagacggggtcttgctatgttgcccaggctagtctcaaactggctccaagcgatcttcctacctcagcctcccaaagtgctaggattacaggtatgagccactgcttccagcctttcttccttttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2398281 746 + 4274983 caggtggatcacctgaggtcagaagtttgagaccagcctggccaacatggtgaa-------------accctgtctctgctaaaaatacaaaaattagccgaatgtggtggcatgaacctgtagtcccagctactt----gggaggctgaggcatg-agaattgcttgaaccc--aggaggc-agaggttacag-tgaaccaaaattgtgccactagtactccagcctgggcgac-agagcaagatttcgtctc-aaaacaaaaacaaaaacaaaaa--gtcttgcctattaaacagtaactcggcattttccccttctctcagctcctggtgaacaacctctcttctactttttgtctccaaaaatttgactgttttaggcacctcgta-tatatggaatcacacagtatttgtcctttagtatctggcgtctt------agcatagtgtctccaaggttcatccatgttggagcatgttattagaa-----------------------tttattgac---agggt----ctctgtcacccaggctggagtgcagtggcacgatcaagctcactgcggcctcatatgcctgggttcaagtgatcctcatgcctcagcctcccaagtagctggaactacaaatgtgcaccatcatgccaagctaattcttaaattttctgtagagacagggtcttgctatgttgcccaggctagtctcaaactggccccaagcgatcttcctacctcagcctcccaaagtgctaggattacaggcatgagccactgcttccagcctttcttccttttt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28609698 766 + 49145316 caggcggattacctgaagtcagaaatttgagatcagcctagccaacatggtgaa-------------accttgtctctactaaaaatgtaaaaattagccagacatggtggcatgagcctgtaatcccagctactt----aggaggctgaggcatg-agaattgattgaaccc--aggaggc-agaggttacag-tgagccaagattgcgccactagcactccaacctgggtgac-agagcaga---ctgtctc------aaaaaaaaaaaaaaaaa--gtcttgtccattaaacagtaactccccattttccccttctatcagctcctgg-gaacaacctctcttctactttttgtctctaaaaatttaactattttaggcaccttata-tatgtggaattacacaatatttttcttt-agtgtctggcttctttcactgagcagagtgtctttaaggttcatccatgttggagcattttattagaattcctttccttaaaa-atttt--tttattgac---agagtctcactttgttacccagggtggagtgcggtggtgcagtcacgctcactgcagcctcaaatgcttgggttcaagtgatcctcatgccgtagcctcccgagtagctggaactacaagtgtgggccattacacccagccaatttttaatttttttctaaagacaggatttcgctctgttgcccaggctagtctcaaactggcctcaagcagtcttcttaccaaagcctcccaaagtgctatgattacaggcatgagccactgttctcagcttttcttccttttt i calJac3.chr22 C 0 I 1716 s saiBol1.JH378197 5462329 750 + 8899380 tggatggattacctgaagtcagaagtttgagaccagcc-agccaacatggtgaa-------------accctatctctactaaaaatgtaaaaattagccagacatggtggcatgagcctgtaatcccagctactt----aggaggctgaggcatg-agaatcgcttgaaccc--aagaggc-agaggttgcag-tgagccaagattgcgccactagcactccagcctgggcgac-aaagcaagactctatctc------aaaaaaaaaaaaaaaaaaggtcttgcccattaaacagtaactccccattttccccttctgtcagctcctgg-gaacaacctctcttcgactttttgtctctaaaaatttaactattttaggcaccttatattatgtggaatgacacaatatttgtcctt--------------------------tagtgtctccaaggttcatccatgttggagcatgttattagaattcctttccttaaaatttttt--tttactgacaaaagagtctcactctgttacccagggtggagtgtagtggtgcagtcaagctcactgcagcctcaaacacttgggttcaagtgatcctcatgcctcagcctcccgagtagctggaactacaagtgtgggccattatatccagccaatttttaatttttttctaaagacaggatttcactatgttgcccaggctagtctcaaactggcctcaagcaatcttcctacctaagcctcccaaagtgctatgattacaggcatgagccactgctctcagcttttcctcctgttt i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 413458 784 - 4471408 cgggtggattacctgaagtcagaaatttgagaccagtctagccaacatggtgaacagtctagccaacatcctgtctctactaaaaatgtaaaaattagccagacatggtggcatgagcctgtaatcccagctactt----aggaggctcaggcatg-agaatcgcttgaaccc--aggaggc-agaggttgcag-tgagccgaggtcgcaccatt-gcacttcagcctgggtaacaagagcgaaactccgtctc------aaaaaaaaaaaaaaaaa--gtctagcccattaaacagtaactccccattttccccttctgtcagctcctgg-gaacaacttctcttctactttttgtctctaaaaatttaactattttaggcactttata-tatgtagaattacacaatatttgtcctttagtgtctggcttcttttactgagcagagtgtctccaaggttcatccatgttggagcaggttattagaattcctttccttaaaaattttt--tttattgac---agggtttcactctgttacccagggtggagtgcagtggtgcagtcaagctcactgcagcctcaaacgcttgggttcaagtgatcctcatgcctcagcctcctgagtagctggaactacaagtgtgggccattgcatccagccaatttttaatttttttctaaagatagggtttcactatgttgcccaggctagtctcaaactggcctcaagcaatcttcctacctaagcctcccaaagtgctatgattacaggcatgagccactgctctcagcttttcttccttttt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e canFam3.chr1 4659747 1550 - 122678785 I e cebCap1.NW_016107633v1 1666787 2669 - 2680843 I e nomLeu3.chr10 63953772 1101 - 106955855 I a score=288507.000000 s hg38.chr19_GL383574v1_alt 133895 57 + 155864 aatactaaataatagtccattgtatggatataccacatttgtttatctattcatctt s panTro5.chr19 36201510 57 + 61309027 aatactaaataatagtccattgtatggatataccacatttgtttatctattcatctt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39945722 57 + 64411610 aatactaaataatagtccattgtatggatataccacatttgtttatctattcatctt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6357415 57 - 8369475 aatactaaataatagtccattgtatggatataccacatttgtttatctgttcatctt i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30270287 53 + 53671032 aatgctaaataatagtccattgtatggatataccacatttgttta----ttcatctt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34724198 53 + 59248254 aatgctaaataatagtacattatatggatataccacatttgttta----ttcatctt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4596564 53 - 13342542 aatgctaaataatagtccattgtatggatataccacatttgttta----ttcatctt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5521443 53 + 7714307 aatgctaaataatagtccattgtatggatataccacatttgttta----ttcatctt i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 957132 53 - 2385121 aatgctaaataatagtccattgtatggatataccacatttgttta----ttcatctt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2399027 53 + 4274983 aatgctaaataatagtccattgtatggatataccacatttgttta----ttcatctt i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5463079 57 + 8899380 agtgctaaataatagtcccttgtatggatataccacatttgtttttttttttttttt i saiBol1.JH378197 C 0 I 967 s aotNan1.NW_018505377v1 414242 57 - 4471408 agtgctaaataatagtccattgtatggatataccacatttgtttatctgttcatctg i aotNan1.NW_018505377v1 C 0 I 1 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e canFam3.chr1 4659747 1550 - 122678785 I e cebCap1.NW_016107633v1 1666787 2669 - 2680843 I e calJac3.chr22 28610464 1716 + 49145316 I e nomLeu3.chr10 63953772 1101 - 106955855 I a score=2952153.000000 s hg38.chr19_GL383574v1_alt 133952 650 + 155864 ccatggacatttgaattgtttccaccttttgactattatgaataatgcttcggtgaacatgggtgaagaaatacctgctcacgtccttgctttcagttcttttgggtagatgcacagaagtggatttcctgaatcacatgg------taattctatgtttaattttttaaggaagcaccatactgttttccacagtggctgcactattttatattcccactagcaatacacaaggcttccaatttctccatgtccttgccagcact----------ttttgttttgttttgtttttgagacagtgtctcgctctccgtcccaggctggagttcagtggcccattgcgatctcggctcactgcaacctgtgcttcccgggctcaggtgatcctcccacctcagcctcccaagtagctgggaccacgcctggc-ta-ttttt----ttttttatttttagta-----gagacgaggtttctccatgttgcccaggctggCAGTGgccagcacttattttctgtgttttgtttattttaatattagccatcctaatagggtatgaagtggtatctcactgtggttttgatttgcattttccaagttatattattccctagttgtactgtctgttcttgccttactgtaaagaaatacttgagactgggtaatttataaac s panTro5.chr19 36201567 653 + 61309027 ccatggacatttgaattgtttccaccttttgacta-tatgaataatgcttgggtgaacatgggtgaagaaatacctgctcacgtccttgctttcaattcttttgggtagatgcacagaagtggatttgctgaatcacatgg------taattctatgtttaattttttaaggaagcaccatactgttttccacagtggctgcactattttatattcccactagcaatacacaaggcttccaatttctccatgtccttgccagcact----------ttttgttttgttttgtttttgagacagtgtctcgctctccgtcccaggctggagttcagtggcccattgcgatctcggctcactgcaacctgtgcttcccgggctcaggtgatcctcccacctcagcctcccaagtagctgggaccacgcctggc-tt-ttttttttattttttatttttagta-----gagacgaggtttctccatgttgcccaggctggCAGTGgccagcacgtattttctgtgttttgtttattttaatattagccatcctaatagggtatgaagtggtatctcactgtggttttgatttgcattttccaagttatattattccctagttgtactgtctgttcttgccttactgtaaagaaatacttgagactgggtaatttataaac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39945779 654 + 64411610 ccatggacatttgaattgtttccaccttttgacta-tatgaataatgcttgggtgaacatgggtgaagaaatacctgctcacgtccttgctttcaattcttttgggtagatgcacagaagtggatttgctgaatcacatgg------taattctatgtttaattttttaaggaagcaccatactgttttccacagtggctgcactattttatattcccactagcaatacacaaggcttccaatttctccatgtccttgccagcact----------ttttgttttgttttgtttttgagacagtgtctcgctctccgtcccaggctggggttcagtggcccattgcgatctcggctcactgcaacctgtgcttcccgggctcaggtgatcctcccacctcagcctcccaagtagctgggaccacgcctggctta-tttttttttttttttttttttagta-----gagacgaggtttctccatgttgcccaggctggCAGTGgccagcacgtattttctgtgttttgtttattttaatattagccatcctaatagggtatgaagtggtatctcactgtggttttgatttgcattttccaagttatattattccctagttgtactgtctgttcttgccttactgtaaagaaatacttgagactgggtaatttataaac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6357472 651 - 8369475 ccatggacatttgaattgtttccaccttttgactattatgaataatgcttcggtgaacgtgggtgaagaaatacctgctcacgtccttgctttcaattcttttgggtagatgcacagaagtggatttgctgaatcacatgg------taattctatgtttaattttttaaggaagcaccatactgttttccacagtggctgcactattttatatt-ccactagcaatacacaaggcttccaatttctccatgtccttgccagcact----------ttttgttttgttttgtttttgagacagtgtctcactctccgtcccaggctggagttcagtggcccattgcgatctcggctcactgcaacctgtgcttcccgggctcaggtgatcctcccacctcagcctcccaagtagctgggaccacgcctggc-ta-ttttttt--ttttttatttttagta-----gagacgaggtttctccatgttgcccaggctggCAGTGgccagcacttattttctgtgttttgtttattttaatattagccatcctaatagggtatgaagtggtatctcactgtggttttgatttgcattttccaagttatattattccctagttgtactgtctgttcttgccttactgtaaagaaatacttgagactgggtaatttataaac i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30270340 647 + 53671032 ccatggacatttggattgtttccaccttttgactattatgaataatgcttctgtgaacatgggtgaagaaatacctgttcacgtccttgctttcaattcttttgcgtatatgtgtagaaa-----ttgctgaatcacgtgg------taattccatgtttaattttttaaggaagcacc-tactgttttccacagtagctgcactattttgtattcccactagcaatacacagggcttccaatttctccatgtccttgccaacactttt-----tgttttgttttgttttgtttttgagacagtgtctcgctctgtggcccaggctggagttcggtggcccactgtgatctcggctcactgcaacctctgcttcccaggctcaggtgatcctcccacctcagcctcccaagtagctgggaccacgcctggc-ta-ttt------tttttaatttttagta-----gagacggggtttctccatgttgcccaggctggCGATGgccagcacttattttctgtgttttgtttattttaacattagccatcctaatggggtattaagtggtatctcattgtcgttttgatttgcattttcctagttatattattccctagttgtactgtccattcttgccttactataaagaaatacctgaaactgggtaatttataaac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34724251 647 + 59248254 ccatggacatttggattgtttccaccttttgactattatgaataatgcttctgtgaacatgggtgaagaaatacctgttcacgtccttgctttcaattcttttgcgtatatgtgtagaaa-----ttgctgaatcacgtgg------taattccatgtttaattttttaaggaagcacc-tactgttttccacagtagctgcactattttgtattcccactagcaatacacagggcttccaatttctccatgtccttgccagcactttt-----tgttttgttttgttttgtttttgagacagtgtctcgctctgtggcccaggctggagttcagtggcccactgcgatctcggctcactgcaacctctgcttcccaggctcaggtgatcctcccacctcagcctcccaagtagctgggaccacgcctggc-ta-ttt------tttttaatttttagta-----gagacggggtttctccatgttgcccagggtggCGATGgccagcacttattttctgtgttttgtttattttaacattagccatcctaatggggtatgaagtggtatctcattgtcgttttgatttgcattttcctagttatattattccctagttgtactgtccattcttgccttactataaagaaatacctgaaactgggtaatttataaac i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4596617 642 - 13342542 ccatggacatttggattgtttccaccttttgactattatgaataatgcttctgtgaacatgggtgaagaaatacctgttcacgtccttgctttcaattcttttgcgtatatgtgtagaaa-----ttgctgaatcacgtgg------taattccatgtttaattttttaaggaagcacc-tactgttttccacagtagctgcactattttgtattcccactagcaatacacagggcttccaatttctccatgtccttgccagcactttt-----tgttttgttttgttttgtttttgagacagtgtctcgctctgtggcccaggctggagttcagtggcccactgcgatctcggctcactgcaacctctgcttcccaggctcaggtgatcctcccacctcagcctcccaagtagctgggaccacgcctggc-tatttt------tttttaatttttagta-----gagacggggtttctccatgttgcccaggctggCGATGgccagcacttattttctgtgttttgtttattttaacattagccgtcctaatggggtatgaagtggtatctcattgtcgttttg------attttcctagttatattattccctagttgtactgtccattcttgccttactataaagaaatacctgaaactgggtaatttataaac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5521496 647 + 7714307 ccatggacatttggattgtttccaccttttgactattatgaataatgcttctgtgaacatgggtgaagaaatacctgttcacgtccttgctttcaattcttttgcgtatatgtgtagaaa-----ttgctgaatcacgtgg------taattccatgtttaattttttaaggaagcacc-tactgttttccacagtagctgcactattttatattcccactagcaatacacagggcttccaatttctccatgtccttgccagcactttt-----tgttttgttttgttttgtttttgagacagtgtctcgctctgtggcccaggctggagttcagtggcccactgcgatctcggctcactgcaacctctgcttcccaggctcaggtgatcctcccacctcagcctcccaagtagctgggaccacgcctggc-ta-ttt------tttttaatttttagta-----gagacggagtttctccatgttgcccaggctggCAATGgccagcacttattttctgtgttttgtttattttaacattagccatcctaatggggtatgaagtggtatctcattgtcgttttgatttgcattttcctagttatattattccctagttgtactgtccattcttgccttactataaagaaatacctgaaactgggtaatttataaac i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 957185 647 - 2385121 ccatggacatttggattgtttccaccttttgactattatgaataatgcttctgtgaacatgggtgaagaaatacctgttcacgtccttgctttcaattcttttgcgtatatgtgtagaaa-----ttgctgaatcacgtgg------taattccatgtttaattttttaaggaagcacc-tactgttttccacagtagctgcactattttatattcccactggcaatacacagggcttccaatttctccatgtccttgccagcactttt-----tgttttgttttgttttgtttttgagacagtgtctcgctctgtggcccaggctggagttcagtggcccactgcgatctcggctcactgcaacctctgcttcccaggctcaggtgatcctcccacctcagcctcccaagtagctgggaccacgcctggc-ta-ttt------tttttaatttttagta-----gagatggggtttctccatgttgcccaggctggCGATGgccagcacttactttctgtgttttgtttattttaacattagccatcctaatggggtatgaagtggtatctcattgtcgttttgatttgcattttcctagttatattattccctagttgtactgtccattcttgccttactataaagaaatacctgaaactggataatttataaac i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2399080 642 + 4274983 ccatggacatttggattgtttccaccttttgactgttatgaataatgcttctgtgaacatgggtgaggaaatacctgttcatgtccttgctttcaattcttttgcatatatgtgcagaaa-----ttgctgaatcacgtgg------taattccacgtttaattttttaaggaagcacc-tactgttttccacagtagctacactattttatattcccactagcaatatacagggcttccaatttctccatgtccttgccagcact----------ttttgttttgttttgtttttgagacagtgtctcgctctgtggcccaggctggagttcagtggcccactgcgatctcggctcactgcaacctgtgcttcccaggctcaggtgttcctcccacctctgcctctcaagtagctgggaccacgcctggc-ta-ttt------ttttttatttttagta-----gagacagggtttctccatgttgcccactctggCGATGgccagcatttattttctgtgttttgtttattttaacattagccatcctaatggggtatgaagtggtatctcattgtcgttttgatttgcgttttcctagttatattattccctagttgtactgtccgttcttgccttactataaagaaatacctgaaactgggtaatttataaac i colAng1.NW_012111697v1 C 0 C 0 s aotNan1.NW_018505377v1 414300 667 - 4471408 ccatggacatttggattgtttccaccttttgactattttgaataatgcatctgtgagcatgggtgaagaaatatctgttcaagtccttgctttcaattcttttgggtatatacgcagaagtggaattgctgaatcacatagaatcacaaattctatgtttaa-tttttaagaaagcaccatactgttttccacagtggctgtactattttatattcccactagcaacatacagggcttccagtttctccgtgtccttgccagcactttttgttctgttttGCtttgttttgtttttgaaacagtgtcttgctctgtggcccaggctggagtgcagtggcgtagggcaatcttggctcactgcaacgtccacctcccgggctcagatgatcctcccacctcagccttccaagtagctgggaccacgcctggc-ta-ttt------ttttttatttttagtacagtggatacggggtttctccatgttgcccaacctggCAGTGgccagcacttacttcatatgttttgtttattttgacagtagccatcctaatgggatatgaagtggtatctcactgtggtttt-atttgcatttccctagttatattattctctagttgtactgtccgttcttgtgttactgtaaagaaatacctgagactgggtaatttataaag i aotNan1.NW_018505377v1 I 1 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e canFam3.chr1 4659747 1550 - 122678785 I e cebCap1.NW_016107633v1 1666787 2669 - 2680843 I e saiBol1.JH378197 5463136 967 + 8899380 I e calJac3.chr22 28610464 1716 + 49145316 I e nomLeu3.chr10 63953772 1101 - 106955855 I a score=38070.000000 s hg38.chr19_GL383574v1_alt 134602 9 + 155864 aaaagtggt s panTro5.chr19 36202220 9 + 61309027 aaaagtggt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39946433 9 + 64411610 aaaagtggt i panPan2.chr19 C 0 C 0 s rheMac8.chr19 30270987 9 + 53671032 aaaagtggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34724898 9 + 59248254 aaaagtggt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4597259 9 - 13342542 aaaagtggt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5522143 9 + 7714307 aaaagtggt i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 957832 9 - 2385121 aaaagtggt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2399722 9 + 4274983 aaaagtggt i colAng1.NW_012111697v1 C 0 C 0 s aotNan1.NW_018505377v1 414967 9 - 4471408 aaaagtggt i aotNan1.NW_018505377v1 C 0 I 1258 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e canFam3.chr1 4659747 1550 - 122678785 I e cebCap1.NW_016107633v1 1666787 2669 - 2680843 I e saiBol1.JH378197 5463136 967 + 8899380 I e calJac3.chr22 28610464 1716 + 49145316 I e nomLeu3.chr10 63953772 1101 - 106955855 I e gorGor5.CYUI01015150v1 6358123 0 - 8369475 C a score=26334.000000 s hg38.chr19_GL383574v1_alt 134611 9 + 155864 ttaattggc s panTro5.chr19 36202229 9 + 61309027 ttaattggc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39946442 9 + 64411610 ttaattggc i panPan2.chr19 C 0 C 0 s rheMac8.chr19 30270996 9 + 53671032 tcagttggc i rheMac8.chr19 C 0 I 1347 s macFas5.chr19 34724907 9 + 59248254 tcagttggc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4597268 9 - 13342542 tcagttggc i macNem1.NW_012011689v1 C 0 I 3627 s cerAty1.NW_012005268v1 5522152 9 + 7714307 tcagttggc i cerAty1.NW_012005268v1 C 0 I 1361 s manLeu1.NW_012102454v1 957841 9 - 2385121 tcagttggc i manLeu1.NW_012102454v1 C 0 I 1364 s colAng1.NW_012111697v1 2399731 9 + 4274983 tcagttggc i colAng1.NW_012111697v1 C 0 I 1323 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e canFam3.chr1 4659747 1550 - 122678785 I e aotNan1.NW_018505377v1 414976 1258 - 4471408 I e cebCap1.NW_016107633v1 1666787 2669 - 2680843 I e saiBol1.JH378197 5463136 967 + 8899380 I e calJac3.chr22 28610464 1716 + 49145316 I e nomLeu3.chr10 63953772 1101 - 106955855 I e gorGor5.CYUI01015150v1 6358123 0 - 8369475 C a score=207.000000 s hg38.chr19_GL383574v1_alt 134620 1 + 155864 c s panTro5.chr19 36202238 1 + 61309027 c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39946451 1 + 64411610 c i panPan2.chr19 C 0 C 0 s macFas5.chr19 34724916 1 + 59248254 t i macFas5.chr19 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e canFam3.chr1 4659747 1550 - 122678785 I e aotNan1.NW_018505377v1 414976 1258 - 4471408 I e cebCap1.NW_016107633v1 1666787 2669 - 2680843 I e saiBol1.JH378197 5463136 967 + 8899380 I e calJac3.chr22 28610464 1716 + 49145316 I e colAng1.NW_012111697v1 2399740 1323 + 4274983 I e manLeu1.NW_012102454v1 957850 1364 - 2385121 I e cerAty1.NW_012005268v1 5522161 1361 + 7714307 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I e rheMac8.chr19 30271005 1347 + 53671032 I e nomLeu3.chr10 63953772 1101 - 106955855 I e gorGor5.CYUI01015150v1 6358123 0 - 8369475 C a score=100.000000 s hg38.chr19_GL383574v1_alt 134621 1 + 155864 g s macFas5.chr19 34724917 1 + 59248254 g i macFas5.chr19 C 0 I 1704 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e canFam3.chr1 4659747 1550 - 122678785 I e aotNan1.NW_018505377v1 414976 1258 - 4471408 I e cebCap1.NW_016107633v1 1666787 2669 - 2680843 I e saiBol1.JH378197 5463136 967 + 8899380 I e calJac3.chr22 28610464 1716 + 49145316 I e colAng1.NW_012111697v1 2399740 1323 + 4274983 I e manLeu1.NW_012102454v1 957850 1364 - 2385121 I e cerAty1.NW_012005268v1 5522161 1361 + 7714307 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I e rheMac8.chr19 30271005 1347 + 53671032 I e nomLeu3.chr10 63953772 1101 - 106955855 I e gorGor5.CYUI01015150v1 6358123 0 - 8369475 C e panPan2.chr19 39946452 0 + 64411610 C e panTro5.chr19 36202239 0 + 61309027 C a score=0.000000 s hg38.chr19_GL383574v1_alt 134622 291 + 155864 ggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagattgagaccatcccggctaaaacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgtagtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcccgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaa e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e canFam3.chr1 4659747 1550 - 122678785 I e aotNan1.NW_018505377v1 414976 1258 - 4471408 I e cebCap1.NW_016107633v1 1666787 2669 - 2680843 I e saiBol1.JH378197 5463136 967 + 8899380 I e calJac3.chr22 28610464 1716 + 49145316 I e colAng1.NW_012111697v1 2399740 1323 + 4274983 I e manLeu1.NW_012102454v1 957850 1364 - 2385121 I e cerAty1.NW_012005268v1 5522161 1361 + 7714307 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I e macFas5.chr19 34724918 1704 + 59248254 I e rheMac8.chr19 30271005 1347 + 53671032 I e nomLeu3.chr10 63953772 1101 - 106955855 I e gorGor5.CYUI01015150v1 6358123 0 - 8369475 C e panPan2.chr19 39946452 0 + 64411610 C e panTro5.chr19 36202239 0 + 61309027 C a score=91.000000 s hg38.chr19_GL383574v1_alt 134913 1 + 155864 a s nomLeu3.chr10 63954873 1 - 106955855 a i nomLeu3.chr10 I 1101 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e canFam3.chr1 4659747 1550 - 122678785 I e aotNan1.NW_018505377v1 414976 1258 - 4471408 I e cebCap1.NW_016107633v1 1666787 2669 - 2680843 I e saiBol1.JH378197 5463136 967 + 8899380 I e calJac3.chr22 28610464 1716 + 49145316 I e colAng1.NW_012111697v1 2399740 1323 + 4274983 I e manLeu1.NW_012102454v1 957850 1364 - 2385121 I e cerAty1.NW_012005268v1 5522161 1361 + 7714307 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I e macFas5.chr19 34724918 1704 + 59248254 I e rheMac8.chr19 30271005 1347 + 53671032 I e gorGor5.CYUI01015150v1 6358123 0 - 8369475 C e panPan2.chr19 39946452 0 + 64411610 C e panTro5.chr19 36202239 0 + 61309027 C a score=409.000000 s hg38.chr19_GL383574v1_alt 134914 3 + 155864 aaa s nomLeu3.chr10 63954874 3 - 106955855 aac i nomLeu3.chr10 C 0 C 0 s saiBol1.JH378197 5464103 3 + 8899380 aaa i saiBol1.JH378197 I 967 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e canFam3.chr1 4659747 1550 - 122678785 I e aotNan1.NW_018505377v1 414976 1258 - 4471408 I e cebCap1.NW_016107633v1 1666787 2669 - 2680843 I e calJac3.chr22 28610464 1716 + 49145316 I e colAng1.NW_012111697v1 2399740 1323 + 4274983 I e manLeu1.NW_012102454v1 957850 1364 - 2385121 I e cerAty1.NW_012005268v1 5522161 1361 + 7714307 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I e macFas5.chr19 34724918 1704 + 59248254 I e rheMac8.chr19 30271005 1347 + 53671032 I e gorGor5.CYUI01015150v1 6358123 0 - 8369475 C e panPan2.chr19 39946452 0 + 64411610 C e panTro5.chr19 36202239 0 + 61309027 C a score=10698.000000 s hg38.chr19_GL383574v1_alt 134917 19 + 155864 aaaagtggtttaattggct s gorGor5.CYUI01015150v1 6358123 19 - 8369475 aaaagtggtttaattggct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63954877 19 - 106955855 aaaagtggtttaattggct i nomLeu3.chr10 C 0 C 0 s saiBol1.JH378197 5464106 19 + 8899380 aaaagtggtttaattggct i saiBol1.JH378197 C 0 I 16 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e canFam3.chr1 4659747 1550 - 122678785 I e aotNan1.NW_018505377v1 414976 1258 - 4471408 I e cebCap1.NW_016107633v1 1666787 2669 - 2680843 I e calJac3.chr22 28610464 1716 + 49145316 I e colAng1.NW_012111697v1 2399740 1323 + 4274983 I e manLeu1.NW_012102454v1 957850 1364 - 2385121 I e cerAty1.NW_012005268v1 5522161 1361 + 7714307 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I e macFas5.chr19 34724918 1704 + 59248254 I e rheMac8.chr19 30271005 1347 + 53671032 I e panPan2.chr19 39946452 0 + 64411610 C e panTro5.chr19 36202239 0 + 61309027 C a score=71296.000000 s hg38.chr19_GL383574v1_alt 134936 62 + 155864 gtacaggaagtatggcagcatctgctcctggggaggccttagggagcttttattggtggcag s panTro5.chr19 36202239 62 + 61309027 gtacaggaagtatggcagcatctgctcctggggaggccttagggagcttttattggtggcag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39946452 62 + 64411610 gtacaggaagtatggcagcatctgctcctggggaggccttagggagcttttattggtggcag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6358142 62 - 8369475 gtataggaagtatggcagcatctgctcctggggaggccttagggagcttttattggtggcag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63954896 62 - 106955855 gtacaggaagtatggcagcatctgctcctggggaagccttagggagcttttattcatggcag i nomLeu3.chr10 C 0 C 0 s saiBol1.JH378197 5464141 48 + 8899380 gtacaggaagcatggcagcgtctgcttctggggaggtttcaaggagct-------------- i saiBol1.JH378197 I 16 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e canFam3.chr1 4659747 1550 - 122678785 I e aotNan1.NW_018505377v1 414976 1258 - 4471408 I e cebCap1.NW_016107633v1 1666787 2669 - 2680843 I e calJac3.chr22 28610464 1716 + 49145316 I e colAng1.NW_012111697v1 2399740 1323 + 4274983 I e manLeu1.NW_012102454v1 957850 1364 - 2385121 I e cerAty1.NW_012005268v1 5522161 1361 + 7714307 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I e macFas5.chr19 34724918 1704 + 59248254 I e rheMac8.chr19 30271005 1347 + 53671032 I a score=546161.000000 s hg38.chr19_GL383574v1_alt 134998 315 + 155864 aaggcaaagcggagcaggcatcttaaatggcaggagccaggaccgagagagagaagggaggtgctgcccacttttaaacaaccaggtctcatgagaacccactcactattg------agtacaaaggggaaaatccaccacatgatccagtcacctcctcccaggctccacctccaacattgggaattactattcaacatgagatttgtgtggggacacagatttaagctatatcactagtgattagtgatgttgagcatcttttcatgtgcttattagctgttcgcatatttcttggggc-aaaagtctattcaagtcctt s panTro5.chr19 36202301 312 + 61309027 aaggcaaagcggagcaggcatcttaaatggcaggagccaggaccgagagagagaagggaggtgctgcccacttttaaacaaccaggtctcatgagaacccactcactattg------agtacaaaggggaaaatccaacacatgatccagtcacctcc---caggctccacctccaacattgggaattactattcgacgtgagatttgtgtggggacacagatttaagctatatcactagtgattagtgatgttgagcatcttttcatgtgcttattagctgtttgcatatttcttgggac-aaaagtctattcaagtcctt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39946514 312 + 64411610 aaggcaaagcggagcaggcatcttaaatggcaggagccaggaccgagagagagaagggaggtgctgcccacttttaaacaaccaggtctcatgagaacccactcactattg------agtacaaaggggaaaatccaacacatgatccagtcacctcc---caggctccacctccaacattgggaattactattcgacgtgagatttgtgtggggacacagatttaagctatatcactagtgattagtgatgttgagcatcttttcatgtgcttattagctgtttgcatatttcttgggac-aaaagtctattcaagtcctt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6358204 315 - 8369475 aaggcaaagcggagcaggcatcttaaatggcaggagccaggaccgagagagagaagggaggtgctgcccacttttaaacaaccaggtctcatgagaacccactcactattg------agtacaaaggggaaaatccaccacatgatccagtcacctcctcccaggctccacctccaacattgggaattactattcgacatgagatttgtgtggggacacagatttaagctatatcactagtgattagtgatgttgagcatcttttcatgtgcttattagctgtttgcatatttcttgggac-aaaagtctattcaagtcctt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63954958 315 - 106955855 agggcaaagcggagcaggcatcttaaatggcaggagccaggaccgagagagaggagggaggtgctacccacttttaaacaaccaggtctcatgagaacccactcactattg------agtacaaaggggaaaatccaccacacgatccagtcacctcctcccaggctctacctccaacattgggaattactattcgccatgagatttgggtggggacacagatttaaactatatcactagtgattagtgacgttgagcatcttttcatgtgcttattggctgtttgtatatttcttgggac-aaaagtctattcaagtcctt i nomLeu3.chr10 C 0 C 0 s saiBol1.JH378197 5464189 320 + 8899380 aaggcaaagtggagcaggcatcttaaatggcagaag-caggaccaagagagaggagggatgtgctacccacttttaaacaaccaggtctcatgagaacccactcactgctgagacacagtagaaagaggaaaatctatcacatgatccagtcaccacctcccaggttctatctccaaccttgggaattacttttcaacatgagttttgggtggggacacagatctaaactatatcactagtggttagtgatgttgagcatcttttcatgtgcttattggctgtttgtatatttattaggac-aaaagtctattaaagtcctt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1669456 321 - 2680843 aagacaaagtggagcaggcatcttaaatggcagaag-caggaccaagagagaggagggaggtgctacccacttttaaacaaccaggtctcatgagaacccgcttactgctgagacacagtacaaagaggaaaatctattacatgatccagtcacctctttccaggtcctatctccaaccttgggaattgcttttcaacataagttttgattggggacacagatctaaactatatcactagtggttagtgatgttgaacatcttttcatgtgcttattggctgtttgtatatttattaggacaaaaagtctattaaagtcctt i cebCap1.NW_016107633v1 I 2669 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e canFam3.chr1 4659747 1550 - 122678785 I e aotNan1.NW_018505377v1 414976 1258 - 4471408 I e calJac3.chr22 28610464 1716 + 49145316 I e colAng1.NW_012111697v1 2399740 1323 + 4274983 I e manLeu1.NW_012102454v1 957850 1364 - 2385121 I e cerAty1.NW_012005268v1 5522161 1361 + 7714307 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I e macFas5.chr19 34724918 1704 + 59248254 I e rheMac8.chr19 30271005 1347 + 53671032 I a score=545669.000000 s hg38.chr19_GL383574v1_alt 135313 247 + 155864 tgcccatttaaaaattggatttttgtgtttgagttgtaggagttc---tttatatattctggatattaattccttttcccatatgtgatttataaatattttcatctatggattgcttttt------gcttgtaatgtcctttgatgcctaaaagttttgattttgaagtccagtttatctgttttttgttgcctgtgcttttcgtgtcctatccaagaaattattgcTAAGTCtgaactcagtaatttttatata s panTro5.chr19 36202613 247 + 61309027 tgcccatttaaaaattggatttttgtgtttgagttgtaggagttc---tttatatattctggatattaattccttttcccatatgtgatttataaatattttcgtctatggattgcttttt------gcttgtaatgtcctttgatgcctaaaagttttgattttgaagtccagtttatctgttttttgttgcctgtgcttttggtgtcctatccaagaaattattgcTAAGTCtgaactcagtaatttttatata i panTro5.chr19 C 0 C 0 s panPan2.chr19 39946826 247 + 64411610 tgcccatttaaaaattggatttttgtgtttgagttgtaggagttc---tttatgtattctggatattaattccttttcccatatgtgatttataaatattttcgtctatggattgcttttt------gcttgtaatgtcctttgatgcctaaaagttttgattttgaagtccagtttatctgttttttgttgcctgtgcttttggtgtcctatccaagaaattattgcTAAGTCtgaactcagtaatttttatata i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6358519 247 - 8369475 tgcccatttaaaaattggatttttgtgtttgagttgtaggagttc---tttatatattctggatattaattccttttcccatatgtgatttataaatattttcgtctgtggattgcttttt------gcttgtaatgtcctttgatgcctaaaagttttgattttgaagtccagtttatctgttttttgttgcctgtgcttttggtgtcctatccaagaaattattgcTAAGTCTCaactcagtaatttttatata i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63955273 247 - 106955855 tgcccatttaaaaattggatttttgtgttcgagttgtacgagttc---tttatatattctggatattaattccttttcccatatgtgatttataaatattttcatctatggattgcttttt------gcttgtaatgtcctttgatgcctaacagttttaattttgaagtccagtttacctgttttttgttgcctgtgcttttggtgtcatatccaagaaattattgcTAAGTCtgaactcagtaatttttatata i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28612180 245 + 49145316 tgcccatttaaaaattggatttttgtggttgagttgtaggtgttcttttttatatattctggatattaattccttttcccataagtgatttacaaatattttcttctttggattgccttttttc----tctgtaatgtcctttgatgcataaaagttttaattttgaagtctagtttatctgtttttggttgcctgtgcttttgatgtcacatccaagaaattattgccAagtctgaactcag-------tatatg i calJac3.chr22 I 1716 C 0 s saiBol1.JH378197 5464509 249 + 8899380 tgcccatttaaaaattggatttttgtggttgagttataggtgttcttttttatatattttggatattaattccttttcccataagtgatttacaaatattttcttctttgcattgccttttttctatgtttgtaatgtcctgtgatgcataaaagttttaatttggaagtctagtttatctgttttttgttgcctgtgcttttgatgtcatatccaagaaattattgccAAGTCTGAACTCAG-------Tatatg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1669777 249 - 2680843 tgcccatttaaaaattggatttttgtggttgagttgtaggcgttcttttttgtatattctggatattaattccttttcccataagtgatttacaagtattttcttctttggattgccttttttctctgtttgtaatgccctttgatacataaaagttttaattttgaagtccagtttatctgtttttagttgcctgtgctttcagtgtcatatccaagaaattattgccAAGTCTGAACTCAG-------Catatg i cebCap1.NW_016107633v1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e canFam3.chr1 4659747 1550 - 122678785 I e aotNan1.NW_018505377v1 414976 1258 - 4471408 I e colAng1.NW_012111697v1 2399740 1323 + 4274983 I e manLeu1.NW_012102454v1 957850 1364 - 2385121 I e cerAty1.NW_012005268v1 5522161 1361 + 7714307 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I e macFas5.chr19 34724918 1704 + 59248254 I e rheMac8.chr19 30271005 1347 + 53671032 I a score=60376.000000 s hg38.chr19_GL383574v1_alt 135560 22 + 155864 tttaatgattttcacccctaaa s panTro5.chr19 36202860 22 + 61309027 tttaatgattttcacccctaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39947073 22 + 64411610 tttaatgattttcacccctaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6358766 22 - 8369475 tttaatgattttcacccctaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63955520 22 - 106955855 tttaatgattttcacccctaaa i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28612425 21 + 49145316 tttaatgatttttacccc-aaa i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5464758 21 + 8899380 tttaatgatttttacccc-aaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1670026 21 - 2680843 tttaatgatttttacccc-aaa i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 416234 21 - 4471408 tttaatgatttttacccc-aaa i aotNan1.NW_018505377v1 I 1258 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e canFam3.chr1 4659747 1550 - 122678785 I e colAng1.NW_012111697v1 2399740 1323 + 4274983 I e manLeu1.NW_012102454v1 957850 1364 - 2385121 I e cerAty1.NW_012005268v1 5522161 1361 + 7714307 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I e macFas5.chr19 34724918 1704 + 59248254 I e rheMac8.chr19 30271005 1347 + 53671032 I a score=192937.000000 s hg38.chr19_GL383574v1_alt 135582 56 + 155864 tggttattctttttg-atgcttaagttgtcccattattgatcgttaatggcacttat s panTro5.chr19 36202882 56 + 61309027 tggttattctttttg-atgcttaagttgtcccattattgatcgttaatggaacttat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39947095 56 + 64411610 tggttattctttttg-atgcttaagttgtcccattattgatcgttaatggaacttat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6358788 56 - 8369475 tggttattctttttg-atgcgtaagttgtcccattattgatcgttaatggaacttat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63955542 56 - 106955855 tggttattctttttg-atgcttaagttgtcccattattgatcgttagtggaacttat i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28612446 56 + 49145316 tggttattctttttg-aagcttaagttgtcccattattgattgttaatggaacttat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5464779 55 + 8899380 tggttattctttttg-aagcttaagttgtcccattattgatcattaatggaactta- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1670047 56 - 2680843 tggttattctttttg-aagcttaagttgtcccattattgatcgttaatggaacttat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 416255 56 - 4471408 tggttattctttttg-aagcttaagttgtcccattattgatcgttaatggaacttat i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4661297 54 - 122678785 TGTttatgttttttgtatgtttacattgtctc---attggtcattaatacaacttat i canFam3.chr1 I 1550 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398266 402 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e colAng1.NW_012111697v1 2399740 1323 + 4274983 I e manLeu1.NW_012102454v1 957850 1364 - 2385121 I e cerAty1.NW_012005268v1 5522161 1361 + 7714307 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I e macFas5.chr19 34724918 1704 + 59248254 I e rheMac8.chr19 30271005 1347 + 53671032 I a score=1024851.000000 s hg38.chr19_GL383574v1_alt 135638 320 + 155864 ttttcgggtt---ttctaggtgcttttgacatgagcctagtagtgttatatgagttccctgctttctggctttacaagaagtccggggcttatcggaaaaatttctgatcccagatccagaatcagccatttctttaactagttctgattctttttggtgggaaatggtattaagggcattcattacaattaagatgtaaattcc-agtagg--tttttttttttttttagtagaactaggaaatacatactttttggaaagaaaaagatacaccatgatttcagactgatttacttccaattcaaatgaaggatt--------aaaggatttt s panTro5.chr19 36202938 328 + 61309027 ttttcgggtt---ttctaggtgcttttgacatgagcctagtagtgttatatgagttccctgctttctggctttacaagaagtccggggcttatcggaaaaatttctgatcccagatccagaatcagccatttctttaactagttctgattctttttggtgggaaatggtattaagggcattcattacaattaagatgtaaattcc-agtagg--ttttttttttttttaagtagaactaggaaatacatactttttggaaagaaaaagatacaccatgatttcagactgatttacttccaattcaaatgaaggattttttttttaaaggatttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39947151 325 + 64411610 ttttcgggtt---ttctaggtgcttttgacatgagcctagtagtgttatatgagttccctgctttctggctttacaagaagtccggggcttatcggaaaaatttctgatcccagatccagaatcagccatttctttaactagttctgattctttttggtgggaaatggtattaagggcattcattacaattaagatgtaaattcc-agtagg----ttttttttttttaagtagaactaggaaatacatactttttggaaagaaaaagatacaccatgatttcagactgatttacttccaattcaaatgaaggtat-tttttttaaaggatttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6358844 322 - 8369475 ttttcgggtt---ttctaggtgcttttgacatgagcctagtagtgttatatgagttccctgctttctggctttacaagaagtccggggcttatcggaaaaatttctgatcccagatccagaatcagccatttctttaactagttctgattctttttggtgggaaatggtattaagggcattcattacaattaagatgtaaattcc-agtaggtttttttttttttttttagtagaactaggaaatacatactttttggaaagaaaaagatacaccatgatttcagactgatttacttccaattcaaatgaaggatt--------aaaggatttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63955598 321 - 106955855 ttttcgggtt---ttctaggtgcttttgacatgagcctagtagtcttatatgagtaccttgctttctggctttacaagaagtccggggcttatcagaaaaatttctgatcccagatccagaatcagccatttctttaagtagttctgattctttttggtgggaaatggtattaagggcattcattacaattaagatgtaaattcc-agtagg-tttttttttttttttaagtggaactaggaaatacatactttttggaaagAaaaagatacaccatgatttcagactgatttacttccaattcaaatgaaggatt--------aaaggatttt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 28612502 312 + 49145316 tttttgggttga-ttctaggtgcttttgacatg-----agtagtcttgtgtgagttccctgctttctggcttgacaagaagtccagggcttatcagaaaaatttctgataccagatccagaatcagccatttctttaagtagttctgattc-ttttggtgggcagtggtattaggggcattaatttcaactaggatgtaaattccttatagg-------ttttgtttttagtagaactaggaaatacatACTTTTTGGAAAGAAAAAGATGAACCATGATTTCAGACTGATTTACTTCCAATTCAAATAAAGGTTT--------AAGGGATTTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5464834 312 + 8899380 ttttggggttga-ttctaagtgcttttgacatg-----agtagtcttgtgtgagttccctgctttctggcttgacaagaagtctagggcttatgagaaaaatttctgatacaagatccagaatcagccatttctttaagtagttctgattc-ttttggtgggatatggtattaggggcgttaatttcaactaggatgtgaattccttgtagg-------ttttgtttttagtagaactagaaaatacatactttttggaaagaaaaagatgaatcatgatttcagactgatttacttccaactcaagtaaaggatt--------aagggatttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1670103 311 - 2680843 ttttcgggttga-ttctaagtgcttttgacatg-----agtagtcttgtgtgagttccctgctttctggcttgacaagcagtctagggcttatgagaaaaatttctgataccagatccagaatcagccatttctttaagtagttctgattc-tttcagtgggaaatggtatt-ggggcattaatttcagctaggatgtgaatttcttctagg-------ttttgtttttggtagaactaggaaatacatactttttggaaagaaaaagatgaaccatgatttcagactgatttacttccaattcaaataaaggatt--------aagggatttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 416311 301 - 4471408 ttttcgggttga-ttctaagtgcttttgacatg-----agtagtcttgtgtgagttccttgctttctggcttgacaagaagtctagggcttatcagaaaaatttctgataccggatccagaatcgacca------taagtagttctgattc-ttttggtgggaaatggtatt-ggggcattactttcaactaggatgtgaattccttgtagg-------ttttgtttttagtagaaccaggaa----atactttttggaaagaaaaagatgaatcatgatttcagactgatttacttccaattcaaataaaggatt--------aagggatttt i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4661351 278 - 122678785 tcttcaggttga-ctcagagttcttttgacaccagccagat-------taggatccccttgctttctggcttgataaaaattcc-tggcttatc-------ttttttgt------ttctgaatcagccatttctaaaaagaggtctgat---ttttgatggaaaatagtattaggggcattcattacaactgggctgtgattcct-tctagg----------tcttctcagtaaagtaaataagtaca----------aagaaataaggtaaatcatgatttcagactaa--tatttcaaattcaaatgaatggtt--------aaaggatttt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 398668 259 + 643850 TTttcaagttgactcctgggtccttttgatgtgagcttggtagtcttatattggttccctactttctgccatgccaagaaatcctgggcatatcctattcatttcc-atttcagatttggaatcaagcatgtctttaaggagctttgttat-ttttggtgggaaatgattttagggatattcattataact---------------ggtatg-----------------------------------------------agaaaaaagataaatcatggtttcatactga--tatttacaa-tcaaatgaaggatt--------aaaggacttt i dasNov3.JH563638 I 402 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e colAng1.NW_012111697v1 2399740 1323 + 4274983 I e manLeu1.NW_012102454v1 957850 1364 - 2385121 I e cerAty1.NW_012005268v1 5522161 1361 + 7714307 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I e macFas5.chr19 34724918 1704 + 59248254 I e rheMac8.chr19 30271005 1347 + 53671032 I a score=6602.000000 s hg38.chr19_GL383574v1_alt 135958 2 + 155864 ta s panTro5.chr19 36203266 2 + 61309027 ta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39947476 2 + 64411610 ta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6359166 2 - 8369475 ta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63955919 2 - 106955855 ta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34726622 2 + 59248254 TG i macFas5.chr19 I 1704 C 0 s colAng1.NW_012111697v1 2401063 2 + 4274983 ta i colAng1.NW_012111697v1 I 1323 C 0 s calJac3.chr22 28612814 2 + 49145316 TA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5465146 2 + 8899380 ta i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1670414 2 - 2680843 ta i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 416612 2 - 4471408 ta i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4661629 2 - 122678785 ta i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 398927 1 + 643850 t- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e chlSab2.chr6 29323694 2956 + 50890351 I e manLeu1.NW_012102454v1 957850 1364 - 2385121 I e cerAty1.NW_012005268v1 5522161 1361 + 7714307 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I e rheMac8.chr19 30271005 1347 + 53671032 I a score=346257.000000 s hg38.chr19_GL383574v1_alt 135960 33 + 155864 tatctttgattttatatt--tgtcttttctcattt s panTro5.chr19 36203268 33 + 61309027 tatctttgattttatatt--tgtcttttctcattt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39947478 33 + 64411610 tatctttgattttatatt--tgtcttttctcattt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6359168 33 - 8369475 tatctttgattttatatt--tgtcttttctcattt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63955921 33 - 106955855 tatctttgattttatatt--tgtcttttctcattt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30272352 33 + 53671032 tatctttgattttatatt--tgtcttttctcattt i rheMac8.chr19 I 1347 C 0 s macFas5.chr19 34726624 33 + 59248254 TATCTTTGATTTTATATT--TGTCTTTTCTCATTT i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5523522 33 + 7714307 tatctttgattttatatt--tgtcttttctcattt i cerAty1.NW_012005268v1 I 1361 C 0 s chlSab2.chr6 29326650 33 + 50890351 tatctttgattttatatt--tgtcttttctcattt i chlSab2.chr6 I 2956 C 0 s manLeu1.NW_012102454v1 959214 33 - 2385121 tatctttgattttatatt--tgtcttttctcattt i manLeu1.NW_012102454v1 I 1364 C 0 s colAng1.NW_012111697v1 2401065 33 + 4274983 tatctttgattttatatt--tgtcttttctcattt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28612816 33 + 49145316 TATCTTTGATTTTATATT--TGTCTTTTCCCATTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5465148 33 + 8899380 tatctctgattttatatt--tgtcttttcccgttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1670416 33 - 2680843 tatctttgattttatatt--tgtcttttcccgttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 416614 33 - 4471408 tatctttgattttatatt--tgtcttttcccattt i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4661631 35 - 122678785 tttctttgattttatatttgtgtctgttctccttt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 398928 23 + 643850 ----------tttttttt--ttttttttttaatgt i dasNov3.JH563638 C 0 I 69 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I a score=354644.000000 s hg38.chr19_GL383574v1_alt 135993 35 + 155864 gttgaCAGTAACACCAGAGGGGTCCAGTCAAAACA s panTro5.chr19 36203301 35 + 61309027 gttgaCAGTAACACCAGAGAGGTCCAGTGAAAACA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39947511 35 + 64411610 gttgaCAGTAACACCAGAGAGGTCCAGTGAAAACA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6359201 35 - 8369475 gttgaCAGTAACACCAGAGAGGTCCAGTCAAAACA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63955954 35 - 106955855 gttgaCAGTAACACCAGAGAGGTCCAGTCAAAACA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30272385 35 + 53671032 gttgaCAGCAACACCAGAGAGGTCCAGTCAAGACA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34726657 35 + 59248254 GTTGACAGCAACACCAGAGAGGTCCAGTCAAGACA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5523555 35 + 7714307 gttgaCAGTAACACCAGAGAGGTCCAGTCAAGACA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29326683 35 + 50890351 gttgaCAGTAACACCAGAGAGGTCCAGTCAAGACA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 959247 35 - 2385121 gttgaCAGTAACACCAGAGAGGTCCAGTCAAGACA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2401098 35 + 4274983 gttgaCAGTAACACCAGAGGGGTCCAGTCAAAACA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28612849 35 + 49145316 GTTGACAGTAGCACCAGAGAGGTCCAGTCAAAACA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5465181 34 + 8899380 gttgaCAGTAGCACCAGAGAGGT-CAGTCAAAACA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1670449 35 - 2680843 gttgaCAGTAGCACCAGAGAGGTCCAGTCAAAACA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 416647 35 - 4471408 gttgaCAGTAGCACCAGAGAGGTCCAGTCAAAACA i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4661666 35 - 122678785 aTCAACAGTAACACCAGAGAGGTACAGTAAAAACA i canFam3.chr1 C 0 I 37 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398951 69 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I a score=1375623.000000 s hg38.chr19_GL383574v1_alt 136028 156 + 155864 CGATTTTATTGATTGACCGA-TTGATGGAGACCACctcactctgtcgcccaggctggagtatagtggcgccatgttggctcactgcagcctccaccacctgggctcaagtgatccttccacctcagcctcatcagtagctgggactacagggatgca s panTro5.chr19 36203336 156 + 61309027 CGATtttattgattgactga-ttgatggaGACCACctcactctgtcgcccaggctggagtatagtggcgccatgttggctcactgcagcctccaccagctgggctcaagtgatccttccacctcagcctcatcagtagctggtactacagggatgca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39947546 156 + 64411610 CGATtttattgattgactga-ttgatggaGACCACctcactctgtcgcccaggctggagtatagtggcgccatgttggctcactgcagcctccaccagctgggctcaagtgatccttccacctcagcctcatcagtagctgggactacagggatgca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6359236 156 - 8369475 CGATTTTATTGATTGACCGA-TTGATGGAGACCACctcactctgtcgcccaggctggagtatagtggcgccatgttggctcactgcagcctccaccacctgggctcaagtgatccttccacctcagcctcatcagtagctgggactacagggatgca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63955989 156 - 106955855 CGATTTTATTGATTGACCGA-TTGATGGAGACCACctcactctgtcgcccaggctggagtatagtggtgccatattggctcactgcagcctccaccacctgggctcaagtgatccttccacctcagcctcatcagtagctgggactacagggatgca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30272420 156 + 53671032 CGATtttattgattgactga-ttgatggaGACCACcttactctgtcacccaggctggagtatagtggtgccatgttggctcgctgtagcctcaaccacctgggctcaagtgatcctcccacctcagccttatcagtagctgggactacaggcatgca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34726692 156 + 59248254 CGATtttattgattgactga-ttgatggaGACCACcttactctgtcacccaggctggagtatagtggtgccatgttggctcgctgtagcctcaaccacctgggttcaagtgatcctcccacctcagccttatcagtagctgggactacaggcatgca i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5523590 156 + 7714307 CGATtttattgattgactga-ttgatggaGACCACcttactctgtcacccaggctggagtatagtggtgccatgttggctcgctgtagcctcaaccacctgggctcaagtgatcctcccacctcagcttcatcagtagctgggactacaggcatgca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29326718 156 + 50890351 CGATtttattcattgattga-ttgatggaGACCACcttactctgtcacccaggctggagtatagtggtgccatgttggcttgctgcagcctcaaccacctgggctcaagtgatcctcctacctcagcctcatcagtagctgggactacaggcatgca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 959282 156 - 2385121 CGATtttattgattgactga-ttgatggaGACCACcttactctgtcacccaggctggagtatagtggtgccatgttggctcgctgtagcctcaaccacctgggctgaagtgatcctcccacctcagcctcatcagtagctgggactacaggcatgca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2401133 156 + 4274983 CGATtttattgattgactga-ttgatggaGACCACTTTActctgtcacccaggctggagtatagtggtgccatgttggctcactgcagccttgaccacctggactcaagtgatcctcccacctcagcctcatcagtagctgggactacaggcatgca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28612884 156 + 49145316 CAATTTTATTGATTGACTGA-TTGATCGAGACCAtctcactctgtcacccacgctggagtatagtggtgtcgtgttggctcactgcagcctccaccacctgggctcaagtggtgctcccacttcagcctcattagtagttggaacttcaggcatgca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5465215 157 + 8899380 CAGTTTTATTGATTGACTAATTTGATGGAGACCAtcttactctgtcacccaggctggagtgtagaagtgccgtgttggctcactgcagcctccaccacctgggctcaggtgatcctcccatttcagcctcattagcagttgggacttcaggcatgca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1670484 156 - 2680843 CAATtttattgattgactga-ttgatggaGACCAtctcactctgtcacccaggctgtagtatagtggtgccgtgttggcttactgcagcctccaccacctgggttcaagtgatcctcccacttcagcctcattagtagttgggacttcaggcatgca i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 416682 156 - 4471408 CAATtttattgattgactga-ttgatggaGGCCAtctcactctgtcacccaggctggagtgtagtggtgccgtattggcttactgcagcctccaccacctgggctcaagtgatcctcccacttcaacctcattagtagttgggacttcaggcatgca i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 398951 69 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e canFam3.chr1 4661701 37 - 122678785 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I a score=182494.000000 s hg38.chr19_GL383574v1_alt 136184 29 + 155864 ctaccatgtctggataa-----t--------tttgtttgt----tt s panTro5.chr19 36203492 29 + 61309027 ctaccatgtctggataa-----t--------tttgtttgt----tt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39947702 29 + 64411610 ctaccatgtctggataa-----t--------tttgtttgt----tt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6359392 29 - 8369475 ctaccatgtctggataa-----t--------tttgtttgt----tt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63956145 25 - 106955855 ctaccatatctggataa-----t------------tttgt----tt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30272576 37 + 53671032 ccaccatgtctggataa-----ttttttttgtttgtttgt----tt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34726848 37 + 59248254 ccaccatgtctggataa-----ttttttttgtttgtttgt----tt i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5523746 34 + 7714307 ccaccatgtctggataa--------tttttgtttgtttgt----tt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29326874 37 + 50890351 ccaccatgtctggataa-----Ttttgtttgtttgtttgt----tt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 959438 42 - 2385121 ccaccatgtctggataaTTTTTTtttgtttgtttgtttgt----tt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2401289 29 + 4274983 ccaccatgtctggataa-----t--------tttgtttgt----tt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28613040 27 + 49145316 ccactatgtctggataa-----t--------tttgtttgt------ i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5465372 27 + 8899380 ccaccatgtctggataa-----t--------tttgtttgt------ i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1670640 29 - 2680843 ccaccatgtctgggtaa-----t--------ttagtttgttt---- i cebCap1.NW_016107633v1 C 0 I 767 s aotNan1.NW_018505377v1 416838 29 - 4471408 ccaccatgtctggataa-----t--------tttgtttat--tt-- i aotNan1.NW_018505377v1 C 0 I 1018 s dasNov3.JH563638 399020 29 + 643850 ctcccctgagttggtat-----t--------ttcatttgt----tt i dasNov3.JH563638 I 69 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e canFam3.chr1 4661701 37 - 122678785 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I a score=61904.000000 s hg38.chr19_GL383574v1_alt 136213 10 + 155864 gtttgttttg s panTro5.chr19 36203521 10 + 61309027 gtttgttttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39947731 10 + 64411610 gtttgttttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6359421 10 - 8369475 gtttgttttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63956170 10 - 106955855 gtttgttttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30272613 10 + 53671032 gtttgttttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34726885 10 + 59248254 gtttgttttg i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5523780 10 + 7714307 gtttgttttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29326911 10 + 50890351 gtttgttttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 959480 10 - 2385121 gtttgttttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2401318 10 + 4274983 gtttgttttg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28613067 9 + 49145316 -tttttatag i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5465399 9 + 8899380 -tttttatat i saiBol1.JH378197 C 0 C 0 s dasNov3.JH563638 399049 10 + 643850 gttttttttg i dasNov3.JH563638 C 0 I 279 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e canFam3.chr1 4661701 37 - 122678785 I e aotNan1.NW_018505377v1 416867 1018 - 4471408 I e cebCap1.NW_016107633v1 1670669 767 - 2680843 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I a score=748131.000000 s hg38.chr19_GL383574v1_alt 136223 148 + 155864 agat---ggagtctcactctgtcacccaggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccgggttcaagtgattttcctgcctcagcctccctggtagctgggactacagacgc---ctgccactatgcctggctaa s panTro5.chr19 36203531 148 + 61309027 agat---ggagtctcactctatcacccaggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccgggttcaagtgattttcctgcctcagcctccctggtagctgggactacagacgc---ctgccactatgcctggctaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39947741 148 + 64411610 agat---ggagtctcactctatcacccaggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccgggttcaagtgattttcctgcctcagcctccctggtagctgggactacagacgc---ctgccactatgcgtggctaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6359431 148 - 8369475 agat---ggagtctcactctgtcacccaggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccgggttcaagtgattttcctgcctcagcctccctggtagctgggactacagacgc---ctgccactatgcctggctga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63956180 148 - 106955855 agat---ggagtctcactctgtcacccaggctggagtgcagtggtgtgatttcagctcactgcaacctctgcctcccgggttcaagtgattttcctgcttcagcctccctggtagctgggactacagacgc---ccgccactatgcccggctaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30272623 148 + 53671032 agac---ggagtcttgctctgtcacccaggctagagtgcagtggcgtgatctcggctcactgcaacctctgcctcccgagttcaagtgattttcctgcctcagcctcccgagtaactgggactacagacgc---ccgccaccacacctggctaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34726895 148 + 59248254 agac---ggagtcttgctctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaacctctgcctcccgagttcaagtgattttcctgcctcagcctcccgagtaactgggactacagacgc---ccgccaccacacctggctaa i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5523790 148 + 7714307 agat---ggagtctcgctctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaacctctgcctcccgagttcaagtgattttcctgcctcagcctcccgagtaactgggactacagacgc---ccgccaccacacctggctaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29326921 151 + 50890351 agacggaggagtctcgctctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaccctctgcctcccgagttcaagtgattttcctgcctcagcctcccgagtaactgggactacagacgc---ccgccaccacacctggctaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 959490 151 - 2385121 agat---ggagtgtcgctctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaacctctgcctcccgagttcaagtgattttcctgcctcagcctcccgagtaactgggactacagacgcccgccgccaccacacctggctaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2401328 122 + 4274983 agac---agagtctc-------------------------gtggcgtgatctc-gcttactataacctctgtctcccgagttcaagtgattttcctgcctcagcctcccgagtaactgggactacagacgc---ccgccaccacacctggctga i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28613076 111 + 49145316 agat---ggggtctcactgtgttgcccaggctgatct---------tgaactc----------------------------tcaaggaatcctcccacctcggcctcccaaagtcctgggattacgggcat---gaaccactatacctggccAA i calJac3.chr22 C 0 I 904 s saiBol1.JH378197 5465408 111 + 8899380 agat---ggggtctcgctgtgttgcccaggctggtct---------tgaactc----------------------------tcgaggaatcctcccacctcagcctcccaaagtgctgagattacaggcat---gaaccactatacctggccAA i saiBol1.JH378197 C 0 I 1545 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 399059 279 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e canFam3.chr1 4661701 37 - 122678785 I e aotNan1.NW_018505377v1 416867 1018 - 4471408 I e cebCap1.NW_016107633v1 1670669 767 - 2680843 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I a score=409325.000000 s hg38.chr19_GL383574v1_alt 136371 84 + 155864 tttttgtatttttagtagagacgtggtttcaccatattggccaggctggtctcaaacccctgaccttgtgatctgcctgcctct s panTro5.chr19 36203679 84 + 61309027 tttttgtatttttagtagagacgtggtttcaccatattggccaggctggtcttaaacccctgaccttgtgatctgcctgcctct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39947889 84 + 64411610 tttttgtatttttagtagagacgtggtttcaccatattggccaggctggtcttaaacccctgaccttgtgatctgcctgcctct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6359579 84 - 8369475 tttttgtatttttagtagagacgtggtttcaccatattggccaggctggtctcaaacccctgaccttgtgatctgcctgcctct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63956328 84 - 106955855 tttttgtatttttagtagagatgtggtttcaccatattggccaggctggtctcaaacccctgactttgtgatccgcctgcctct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30272771 84 + 53671032 tttttgtatgtttagtagagacgtggtttcaccatattggccaggctggtctcgaacccctgaccttgtgatatgcctgccgct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34727043 84 + 59248254 tttttgtatgtttagtagagacgtggtttcaccatattggccaggctggtctcgaacccctgaccttgtgatatgcctgccgct i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5523938 84 + 7714307 tttttgtatgtttagtagagacgtggtttcaccatattggccaggctgatctcaaacccctgaccttgtgatatgcctgccgct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29327072 84 + 50890351 tttttgtatgtttagtagagacgtggtttcaccatattggccaggctggtctcgaacccctgaccttatgatatgcctgcctct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 959641 84 - 2385121 tttttgtatgtttagtagagacgtggtttcaccatattggccaggctggtctcaaacccctgaccttgtgatatgcctgccgct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2401450 84 + 4274983 tttttgtatgtttagtagagacgtggtttcaccatattggccaggctggtctcgaacccctgaccttgtgatctgcctgcctct i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 399059 279 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e canFam3.chr1 4661701 37 - 122678785 I e aotNan1.NW_018505377v1 416867 1018 - 4471408 I e cebCap1.NW_016107633v1 1670669 767 - 2680843 I e saiBol1.JH378197 5465519 1545 + 8899380 I e calJac3.chr22 28613187 904 + 49145316 I e macNem1.NW_012011689v1 4597277 3627 - 13342542 I a score=816518.000000 s hg38.chr19_GL383574v1_alt 136455 144 + 155864 gcctcccaaagtgctaggattacagtcatgagccactgcacctggccaattttgtttgtgtgttatagagatggggtctcactgtgttgcccaggctggtcttgaactctaaagcattcctcctgctttggcctcccaaagtga s panTro5.chr19 36203763 144 + 61309027 gcttcccaaagtgctgggattacagtcatgagccactgcacctggccaattttgtttgtgtgttatagagatggggtctcactgtgttgcccaggctggtcttgaactctaaagcattcctcctgctttggcctcccaaagtga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39947973 144 + 64411610 gcttcccaaagtgctgggattacagtcatgagccactgcacctggccaattttgtttgtgtgttatagagatggggtctcactgtgttgcccaggctggtcttgaactctaaagcattcctcctgctttggcctcccaaagtga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6359663 144 - 8369475 gcctcccaaagtgctgggattacagtcatgagccactgcacctggccaattttgtttgtgtgttatagagatggggtctcactgtgttgcccaggctggtcttgacctctaaagcattcctcctgctttggcctcccaaagtga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63956412 144 - 106955855 gcctcccaaagcgctgggattacagtcatgagccactgcgccgggccagttttgtttgtgttttatagagatggggtctcactgtgttgcccaggctggtcttgaactctaaagcattcctcctgctttggcctcccaaagtga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30272855 144 + 53671032 gcctctcaaagtgctgggattacaggcatgagccaccgcgcctggccaattttgtttgttttttatagaaatggggtctcactgtgttgcccaggctggtcttgaactctcaagcaatcctcctgcctcggcctcccaaggtgc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34727127 144 + 59248254 gcctctcaaagtgctgggattacaggcatgagccaccgcgcctggccaattttgtttgttttttatagaaatggggtctcactgtgttgcccaggctggtcttgaactctcaagcaatcctcctgcctcggcctcccaaggtgc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4600904 144 - 13342542 gcctctcaaagtgctgggattacaggcatgagccaccgcacctggccAATtttgtttgttttttatagaaatggggtctcactgtgttgcccaggctggtcttgaactctcaagcaatcctcctgcctcggcctcccaaggtgc i macNem1.NW_012011689v1 I 3627 C 0 s cerAty1.NW_012005268v1 5524022 144 + 7714307 gcctctcaaagtgctgggattacaggcatgagccaccgcgcctggccaattttgtttgttttttatagaaatggggtctcactgtgttgcccaggctggtcttgaactctcaagcagtcctcctgcctcagcctcccaaggtgc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29327156 144 + 50890351 gcctctcaaagtgctgggattacaggcatgagccaccgcgcctggccaattttgtttgttttttatagaaatggggtctcagtgtgttgcccaggctggtcttgaactctcaagcagtcctcctgcctcggcctcccaaggtgc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 959725 144 - 2385121 gcctctcaaagtgctgggattacaggcatgagccaccgcgcctggccaattttgtttgttttttatagaaatggggtctcactgtgttgcccaggctggtcttgaactctcaagcagtcctcctgcctcggcctcccaaggtgc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2401534 144 + 4274983 gcctctcaaagtgctgggattacaggcatgagccactgcacctggccaattttgtttgttttttatagagatggggtctcactgtgttgcctaggctggtcttgaactctcaagcaatcctcctgcctcggcctcccaaagtgc i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 399059 279 + 643850 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e canFam3.chr1 4661701 37 - 122678785 I e aotNan1.NW_018505377v1 416867 1018 - 4471408 I e cebCap1.NW_016107633v1 1670669 767 - 2680843 I e saiBol1.JH378197 5465519 1545 + 8899380 I e calJac3.chr22 28613187 904 + 49145316 I a score=214926.000000 s hg38.chr19_GL383574v1_alt 136599 37 + 155864 tgggattacagatgtgaagcactacacctggccGAAA s panTro5.chr19 36203907 37 + 61309027 tgggattacagatgtgaagcactacacctggccAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39948117 37 + 64411610 tgggattacagatgtgaagcactacacctggccAAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6359807 37 - 8369475 tgggattacagatgtgaagcactacacctggccAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63956556 37 - 106955855 tgggattacagatgtgaagcactatacctggccAAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30272999 37 + 53671032 tgggattacaggtgtgaaccactacgcctggccAAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34727271 37 + 59248254 tgggattacaggtgtgaaccactacgcctggccAAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4601048 37 - 13342542 tgggattacaggtgtgaaccactacgcctggccAAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5524166 37 + 7714307 tgggattacaggtgtgaaccactacgcctggccAAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29327300 37 + 50890351 tgggattataggtgtgaaccactacacctggccAAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 959869 37 - 2385121 tgggattacaggtgtgaaccactacgcctggccAAAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2401678 37 + 4274983 tgggattacaggtgtgaaccactacacctggccAAAA i colAng1.NW_012111697v1 C 0 C 0 s dasNov3.JH563638 399338 27 + 643850 tgggattatata----------tacaccagagggagg i dasNov3.JH563638 I 279 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e canFam3.chr1 4661701 37 - 122678785 I e aotNan1.NW_018505377v1 416867 1018 - 4471408 I e cebCap1.NW_016107633v1 1670669 767 - 2680843 I e saiBol1.JH378197 5465519 1545 + 8899380 I e calJac3.chr22 28613187 904 + 49145316 I a score=1930154.000000 s hg38.chr19_GL383574v1_alt 136636 297 + 155864 -------CACAAttttaa----acttgaaataattcttctctgtgtggctgtgccactaatttggtaaataatatagattcatttgtcttttgtttcatttttagggatatttttcttt----tttatatttgcttttt--gcttatata------tttacgtagttctaaagataaaaccat-aagtaagatagat----tgaaa--gaagtctggctttcctccttgtctttgttcttctctatacgttgtaggtaaacatct-----ttgttggtttttggtttattctcccatggcttattttaaaagctacaagcgtgtgtgtctgt s panTro5.chr19 36203944 297 + 61309027 -------CACAAttttaa----acttgaaataattcttctctgtgtggctgtgccactaatttggtaaataatatggattcatttgtcttttgtttcatttttagggatatttttcttt----tttatatttgcttttt--gcttatata------tttacgtagttctaaagataaaaccat-aagtaagatagat----tgaaa--gaagtctggctttcctccttgtcttcgttcttctctatacgttgtaggtaaacatct-----ttgttggtttttggtttattctcccatggcttattttaaaagctacaagcgtgtgtgtctgt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39948154 297 + 64411610 -------CACAAttttaa----acttgaaataattcttctctgtgtggctgtgccactaatttggtaaataatatagattcatttgtcttttgtttcatttttagggatatttttcttt----tttatgtttgcttttt--gcttatata------tttacgtagttctaaagataaaaccat-aagtaagatagat----tgaaa--gaagtctggctttcctccttgtcttcgttcttctctatacgttgtaggtaaacatct-----ttgttggtttttggtttattctcccatggcttattttaaaagctacaagcatgtgtgtctgt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6359844 297 - 8369475 -------CACAAttttaa----acttgaaataattcttctctgtgtggctgtgccactaatttggtaaataatatagattcatttgtcttttgtttcatttttagggatatttttcttt----tttatatttgcttttt--gcttatata------tttacgtagttctaaagataaaaccgt-aagtaagatagat----tgaaa--gaagtctggctttcctccttgtctttgttcttctctatacgttgtaggtaaacatct-----ttgttggtttttggtttattctcccatggcttattttaaaagctacaagcgtgtgtgtctgt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63956593 294 - 106955855 -------CACAgttttaa----acttgaaataattcttctctgtgtggctatgccactaatttggtaaataatatcgattcatttgtctt---tttaatttttagggatatttttcttt----tttatatttgcttttt--gcttatata------tttacatagttctaaagataaaaccat-aagtaagatagat----tgaaa--gaagtctggctttcctccttgtctttgttcttctccatacgttgtaggtaaacattt-----ttgttggtttttggtttattctcccatggcttattttaaaagctacaggcatgtgtgtctgt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30273036 291 + 53671032 -------CACAGGTTTAA----acttgaaataattcttctctgtgtggctatgccactaatttggtaaataatatagattcatttgtct----tttaagttttagggatatttttcttt----tttatatttgcttttt--gcttatata------tttatgtagttctaaagataaaaccat-aagcaagatagat----tgaaa--gaagtctggctttcctccctg--tctgttcttctctgtaccttgtaggtaaacattt-----ttgttggtttttggtttattctcccatggcttattttaaaagctacaagtatgtgtgtctgt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34727308 293 + 59248254 -------CACAGGTTTAA----acttgaaataattcttctctgtgtggctatgccactaatttggtaaataatataaattcatttgtct----tttaagttttagggatatttttcttt----tttatatttgcttttt--gcttatata------tttatgtagttctaaagataaaaccat-aagcaagatagat----tgaaa--gaagtctggctttcctccctgtctctgttcttctctgtaccttgtaggtaaacattt-----ttgttggtttttggtttattctcccatggcttattttaaaagctacaagtatgtgtgtctgt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4601085 293 - 13342542 -------CACAGGTTTAA----acttgaaataattcttctctgtgtggctatgccactaatttggtaaataatatagattcatttgtct----tttaagttttagggatatttttcttt----tttatatttgcttttt--gcttatata------tttatgtagttctaaagataaaaccat-aagcaagatagat----tgaaa--gaagtctggctttcctccctgtctctgttcttctctgtaccttgtaggtaaacattt-----ttgttggtttttggtttattctcccatggcttattttaaaagctacaagtatgtgtgtctgt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5524203 293 + 7714307 -------CACAGGTTTAA----acttgaaataattcttctctgtgtggctatgccactaatttggtaaataatatagattcatttgtct----tttaagttttagggatatttttcttt----tttatatttgcttttt--gcttatata------tttatgtagttctaaagataaaaccat-aagcaagatagat----tgaaa--gaagtctggctttcctccctgtctctattcttctctgtaccttgtaggtaaacattt-----ttgttggtttttggtttattctcccatggcttattttaaaagctacaagtatgtgtgtctgt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29327337 293 + 50890351 -------CACAGGTTTAA----acttgaaataattcttctctgtgtggctatgccactaatttggtaaataatatagattcatttgtct----tttaagttttagggatatttttcttt----tttatatttgcttttt--gcttatata------tttatgtagttctaaagataaaaccat-aagcaagatagat----tgaaa--gaagtctggcttttctccttgtctttgttcttctctgtaccttgtaggtaaacattt-----ttgttggtttttggtttattctcccatggcttattttaaaagctacaagtatgtgtgtctgt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 959906 293 - 2385121 -------CACAGGTTTAA----acttgaaataattcttctctgtgtggctatgcctctaatttggtaaataatatagattcatttgtct----tttaagttttagggatatttttcttt----tttatatttgcttttt--gcttatata------tttatgtagttctaaagataaaaccat-aagcaagatagat----tgaaa--gaagtctggctttcctccctgtctctattcttctctgtaccttgtaggtaaacattt-----ttgttggtttttggtttattctcccatggcttattttaaaagctacaagtatgtgtgtctgt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2401715 297 + 4274983 -------CACAGGTTTAA----acttgaaataattcttctctgtgtggctgtgccactaatttggtaaataatatagattaatttgtcttttgtttaagttttaggaatattttgcttt----tttatagttgcttttt--gcttatata------tttatgtagttctaaagataaaaccat-aagcaagatagat----tgaaa--gaagtctggcttttctccctgtctttattcttctctgtaccttgtaggtaaacattt-----ttgttggtttttggtttattctctcatggcttattttaaaagctacaagcatgtgtgtctgt i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4661738 298 - 122678785 -------CAAAACTTCAA----acttcaaataatccttttctgtgtgattata-tgccagtttgataaatagtttagggtttttt--------tttttttttaagggattgttttctttttgctttacttttgtttttt--aattgtatccgatattttacttggttctaaagacaaaactagaaagcaaggtagat----tgaga--gaattatagtttccttccaggcttttgttcttttcgatagcacataggt-aacattt-----ctattgatgcttgatttattcttccattgcttattttaaaacatataagcTgggatccctgg i canFam3.chr1 I 37 I 8 s dasNov3.JH563638 399365 313 + 643850 tacatagcattgttttaaaaacacttgaattaatcctt-tctgag-ggttacg-caccaacttgataaata-tttaggttccttcttttg---ttttttttttaggactttttttaaca----tttcattttggttttttaaattatataaaata-cttacg--gttctaatgataaaaccataaagcacagtagatcaagtgaagttgaagtctggcttccctcctttcctttgttcttccccatatcttagaggtaaactttttgttgttgttgatttttggtttattcttccatt-----ttttaaaaaatataagcaaatatatatgt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5536087 17 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e aotNan1.NW_018505377v1 416867 1018 - 4471408 I e cebCap1.NW_016107633v1 1670669 767 - 2680843 I e saiBol1.JH378197 5465519 1545 + 8899380 I e calJac3.chr22 28613187 904 + 49145316 I a score=75919.000000 s hg38.chr19_GL383574v1_alt 136933 15 + 155864 gtgtttctgtattcc s panTro5.chr19 36204241 15 + 61309027 gtgtttctgtattcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39948451 15 + 64411610 gtgtttctgtattcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6360141 15 - 8369475 gtgtttctgtattcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63956887 15 - 106955855 gtgtttttgtattcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30273327 15 + 53671032 gtgtttttgtatacc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34727601 15 + 59248254 gtgtttttgtatacc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4601378 15 - 13342542 gtgtttttgtatacc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5524496 15 + 7714307 gtgtttttgtatacc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29327630 15 + 50890351 gtgtttttgtatacc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 960199 15 - 2385121 gtgtttttgtatacc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2402012 15 + 4274983 gtgtttttgtatacc i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5536104 15 + 5549422 GTGTTTTTCTGGGGC i otoGar3.GL873654 I 17 C 0 s canFam3.chr1 4662044 7 - 122678785 gcggttt-------- i canFam3.chr1 I 8 I 254 s dasNov3.JH563638 399678 8 + 643850 ------ttGTCCCC- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e mm10.chr7 111145668 4122 - 145441459 I e aotNan1.NW_018505377v1 416867 1018 - 4471408 I e cebCap1.NW_016107633v1 1670669 767 - 2680843 I e saiBol1.JH378197 5465519 1545 + 8899380 I e calJac3.chr22 28613187 904 + 49145316 I a score=666099.000000 s hg38.chr19_GL383574v1_alt 136948 105 + 155864 cTATACCTTACTTCATTCCCATTTTATTTCTTCTC--G-tttttatcttggcaatcatatttcttatttccaagaattcattgttgatttctacttcctttatgattt s panTro5.chr19 36204256 107 + 61309027 cTATACCTTACTTCATTCCCATTTTATTTcttctcttg-tttttatcttggcaatcatatttcttatttccaagaattcgttgttgatttctacttcctttatgattt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39948466 107 + 64411610 cTATACCTTCCTTCATTCCCATTTTATTTcttctcttg-tttttatcttggcaatcatatttcttatttccaagaattcgttgttgatttctacttcctttatgattt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6360156 107 - 8369475 cTATACCTTACTTCATTCCCATTTTATTTcttctcttg-tttttatcttggcaatcatatttcttatttccaagaattcgttgtggatttctacttcctttatgattt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63956902 107 - 106955855 GTGTACCTTACTTCATTCCCATTTTATTTcttcccttg-tttttatcttggcaatcatatttcttatttccaataattcgttgttgatttctacttcctttatgattt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30273342 107 + 53671032 cTATACCTTACTTCATTCCCATTGTATTTCTTGCCTTG-tttttatcttggcaatcatatttcttatttccaagaattctttgttgatttctgcttcctttatgattt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34727616 107 + 59248254 cTATACCTTACTTCATTCCCATTGTATTTCTTGCCTTG-tttttatcttggcaatcatatttcttatttccaagaattctttgttgatttctgcttcctttatgattt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4601393 107 - 13342542 cTATACCTTACTTCATTCCCATTGTATTTCTTGCCTTG-tttttatcttggcaatcatatttcttatttccaagaattctttgttgatttctgcttcctttatgattt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5524511 107 + 7714307 cTATACCTTACTTCATTCCCATTGTATTTCTTGCCTTG-tttttatcttggcaatcatatttcttatttccaagaattctttgttgatttctgcttcctttatgattt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29327645 107 + 50890351 cTATACCTTACTTCATTCCCATTGTATTTCTTGCCTTG-tttttatcttggcaatcatatttcttatttccaagaattctttgttgatttctgcttcctttatgattt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 960214 107 - 2385121 cTATACCTTACTTCATTCCCATTGTATTTCTTGCCTTG-tttttatcttggcaatcatatttcttatttccaagaattctttgttgatttctgcttcctttatgattt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2402027 104 + 4274983 ccATACCTTACTTCATTCCCATTGTATTTCTTGCCTTG-tttttatcttggcaatcatatttcttatttccaagaactctttgttgatttctacttccttt---tttt i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5536119 100 + 5549422 CTAAACTATATGTTTCTTCTGTGG----TTTGATCACA-TTTTCATCTTAG---TTGTCTTTATTGGTCCTCTTGGTTTTCTTTCAGCATCTATGATCTTTATCAATT i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 399686 104 + 643850 CTACACCTTACACCATCCTTGTTTTATTTCTCCTCTTgttttttatcttggaaatcatatttcttatttctaagaattttttcttgatt----ctgctttcataattg i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e mm10.chr7 111145668 4122 - 145441459 I e canFam3.chr1 4662051 254 - 122678785 I e aotNan1.NW_018505377v1 416867 1018 - 4471408 I e cebCap1.NW_016107633v1 1670669 767 - 2680843 I e saiBol1.JH378197 5465519 1545 + 8899380 I e calJac3.chr22 28613187 904 + 49145316 I a score=635968.000000 s hg38.chr19_GL383574v1_alt 137053 118 + 155864 ----------gtttgcttttggtttttttttctccccccgagatggagtcttgctctgtt--gcctagagctggaatgcaatagtgcgatctcggctcactgcaacctccgcctcctgggttcaagcaat s panTro5.chr19 36204363 119 + 61309027 ----------gtttgcttttggtttttttt-ctccccccgagacggagtcttgctctattttgcctagagctggaatgcaatagtgcgatctcggctcactgcaacctccgcctcctggtttcaagcaat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39948573 120 + 64411610 ----------gtttgcttttggtttttttttctccccccgagacggagtcttgctctattttgcctagagctggaatgcaatagtgcaatctcggctcactgcaacctccgcctcctgggttcaagcaat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6360263 118 - 8369475 ----------gtttgcttttggtttttttttctccccccgagacggagtcttgctctgtt--gcctagagctggaatgcaatagtgcgatctcggctcactgcaacctccgcctcctgggttcaagcaat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63957009 118 - 106955855 ----------gtttgcttttggtttttttttctccccacgagacggagtcttgctctgtc--gcctagagctggagtgcaatagtgcgatctcggctcactgcaaccttcgcctcctgggttcaagcaac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30273449 115 + 53671032 ----------gtttgcttttgttatttttt---ccgcctgagacggagtcttgctgtgtc--gcccagagctggagtgcagttgtgtgatcttggctcactgcaacctccacatcctgggttcaagcaat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34727723 115 + 59248254 ----------gtttgcttttgttatttttt---ccgcctgagacggagtcttgctgtgtc--gcccagagctggagtgcagtcgtgtgatcttggctcactgcaacctccgcatcctgggttcaagcaat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4601500 115 - 13342542 ----------gtttgcttttgttatttttt---ccgcctgagacggagtcttgctgtgtc--gcccagagctggagtgcagtcgtgtgatcttggctcactgcaacctctgcatcctgggttgaagcaat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5524618 115 + 7714307 ----------gtttgcttttgttatttttt---ccgcctgagacggagtcttgctgtgtc--gcccagagctggagtgcagtggtgtgatcttggctcactgcaacctccgcatcctgggttcaagcaat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29327752 115 + 50890351 ----------gtttgcttttgttttttttt---ccacctgagatggagtcttgctgtgtc--gcccagagctggagtgcagtggtgtgatcttggctcactgcaacctccgcatcctgggttcaagcaat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 960321 115 - 2385121 ----------gtttgcttttgttatttttt---ccgcctgagacggagtcttgctgtgtc--gcccagagctggagtgcagtggtgtgatcttggctcactgcaacctccgcatcctgggttcaagcaat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2402131 114 + 4274983 ----------gtttgcttttgtt-tttttt---ccccccgagacagagtcttgctctgtc--gcccagagctggagtgcagtggtgtgatcttggctcactgcaacttccacatcctggattcaagcaat i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5536219 115 + 5549422 AAAGAACTGGGttttttttttttttttttt---------gagacagagccccaagctgtt--gccctggg-tagaatgccatggc---atcacagctcacagcaacctccaactcctgggctcaagcgat i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 399790 0 + 643850 C e mm10.chr7 111145668 4122 - 145441459 I e canFam3.chr1 4662051 254 - 122678785 I e aotNan1.NW_018505377v1 416867 1018 - 4471408 I e cebCap1.NW_016107633v1 1670669 767 - 2680843 I e saiBol1.JH378197 5465519 1545 + 8899380 I e calJac3.chr22 28613187 904 + 49145316 I a score=77544.000000 s hg38.chr19_GL383574v1_alt 137171 13 + 155864 tctcctgccttgg s panTro5.chr19 36204482 13 + 61309027 tctcctgccttgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39948693 13 + 64411610 tctcctgccttgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6360381 13 - 8369475 tctcctgccttgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63957127 13 - 106955855 tctcctgcctcgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30273564 13 + 53671032 tcttgtgcctcag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34727838 13 + 59248254 tcttgtgcctcag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4601615 13 - 13342542 tcttgtgcctcag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5524733 13 + 7714307 tcttgtgcctcag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29327867 13 + 50890351 tcttgtgcctcag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 960436 13 - 2385121 tcttgtgcctcag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2402245 13 + 4274983 tctcgtgccccag i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5536334 13 + 5549422 tctcctgcctcag i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 399790 13 + 643850 tttcttgcttttg i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e mm10.chr7 111145668 4122 - 145441459 I e canFam3.chr1 4662051 254 - 122678785 I e aotNan1.NW_018505377v1 416867 1018 - 4471408 I e cebCap1.NW_016107633v1 1670669 767 - 2680843 I e saiBol1.JH378197 5465519 1545 + 8899380 I e calJac3.chr22 28613187 904 + 49145316 I a score=567036.000000 s hg38.chr19_GL383574v1_alt 137184 97 + 155864 cctcctgagtagctggg--attacaggcgcacgccaccacaccaggctaatttttgtatttttagtagagacggggtttcaccatgctgg-----ccaggctgg s panTro5.chr19 36204495 97 + 61309027 cctcctgagtagctggg--attacaggcgcacgccaccacaccaggctaatttttgtatttttagtagagacggggtttcaccatgctgg-----ccaggctgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39948706 95 + 64411610 cctcctgagtagctggg--attacaggcgcacgccaccacaccaggctaa-ttttgta-ttttagtagagacggggtttcaccatgctgg-----ccaggctgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6360394 97 - 8369475 cctcctgagtagctggg--attacaggcgcacgccaccacaccaggctaatttttgtatttttagtagagacggggtttcaccatgctgg-----ccaggctgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63957140 97 - 106955855 cctcctgagtagctggg--attacaggcacacgccaccacacctggctaatttttgtatttttagtagagacggggtttcaccatgttgg-----ccaggctgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30273577 97 + 53671032 cctcctgagtagctggg--attacaggcgcccaccaccacacctggctaatttttgtatttttagtagagacggggtttcaccatgttgg-----ccaagctgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34727851 97 + 59248254 cctcctgagtagctggg--attacaggcgcccaccaccacacctggctaatttttgtatttttagtagagacggggtttcaccatgttgg-----ccaagctgg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4601628 97 - 13342542 cctcctgagtagctggg--attacaggcgcccaccaccacacctggctaatttttgtatttttagtagagacggggtttcaccatgttgg-----ccaagctgg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5524746 97 + 7714307 cctcctgaatagctggg--attacaggcgcccaccaccacacctggctaatttttgtatttttagtagagacggggtttcaccgtgttgg-----ccaagctgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29327880 88 + 50890351 cctcctgagtagctggg--attacaggtgcccaccaccacacctggctaatttttgtatttttagtagagacggagtttcaccatgt--------------tgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 960449 97 - 2385121 cctcctgaatagctggg--attacaggcgcccaccaccacacctggctaatttttgtatttttagtagagacggagtttcaccatgttgg-----ccaagctgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2402258 99 + 4274983 cctcctgagtagctgcgatattacaggcgcgtgccaccacacctggctaatttttgtatttttagtagagacagggtttcaccatgttga-----ccaagctgg i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5536347 89 + 5549422 cctcccaagtagttggg--actacaggcgcccgccacaacacctggctattttttg-------gttacagcca-----tcattgt-ttggcgggtccgggctgg i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 399803 0 + 643850 C e mm10.chr7 111145668 4122 - 145441459 I e canFam3.chr1 4662051 254 - 122678785 I e aotNan1.NW_018505377v1 416867 1018 - 4471408 I e cebCap1.NW_016107633v1 1670669 767 - 2680843 I e saiBol1.JH378197 5465519 1545 + 8899380 I e calJac3.chr22 28613187 904 + 49145316 I a score=461471.000000 s hg38.chr19_GL383574v1_alt 137281 86 + 155864 tcttgaactc-----ctgacct---tgtgat-ctgcctgccttggcctcccaaagtgctcggattacaggcgtgagccaccgtgcccagccctgc s panTro5.chr19 36204592 86 + 61309027 tcttgaactc-----ctgacct---tgtgat-ctgcctgccttggcctcccaaagtgctcggattacaggcgtgagccactgtgcccagccctgc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39948801 87 + 64411610 tcttgaactc-----ctgacct---tgtgatcctgcctgccttggcctcccaaagtgctcggattacaggcgtgagccaccgtgcccagccctgc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6360491 86 - 8369475 tcttgaactt-----ctgacct---tgtgat-ctgcctgccttggcctcccaaagtgctcggattacaggcatgagccaccgtgcccagccctgc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63957237 86 - 106955855 tcttgaactc-----ctgacct---tgtgat-ctgcctaccttggcctcccaaagtgctgggattacaggcgtgagccaccatgcccagccctgc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30273674 86 + 53671032 tctcaaactc-----ctgacgt---tgtgat-ctacctgcctcagcctcccaaagtgctgggattgcaggcgtgagcaactgtgcccagccctac i rheMac8.chr19 C 0 I 5 s macFas5.chr19 34727948 86 + 59248254 tctcaaactc-----ctgacgt---tgtgat-ctacctgcctcagcctcccaaagtgctgggattgcaggcgtgagccactgtgcccagccctac i macFas5.chr19 C 0 I 5 s macNem1.NW_012011689v1 4601725 86 - 13342542 tctcaaactc-----ctgacgt---tgtgat-ctacctgcctcagcctcccaaagtgctgggattgcaggcgtgagccactgtgcccagccctac i macNem1.NW_012011689v1 C 0 I 5 s cerAty1.NW_012005268v1 5524843 86 + 7714307 tctcaaactc-----ctgacct---tgtgat-ccacctgcctcagcctcccaaagtgctgggattgcaggcatgagccactgtgcccagccctac i cerAty1.NW_012005268v1 C 0 I 5 s chlSab2.chr6 29327968 86 + 50890351 tctcaaactc-----ctgacct---tgtgat-ccacctgcctcagcctcccaaagtgctgggattgcaggcgtgagccactgtgcccagccctac i chlSab2.chr6 C 0 I 5 s manLeu1.NW_012102454v1 960546 86 - 2385121 tctcaaactc-----ctgacct---tgtgat-ccacctgcctcagcctcccaaagtgctgggattgcaggcatgagccactgtgcccagccctac i manLeu1.NW_012102454v1 C 0 I 5 s colAng1.NW_012111697v1 2402357 86 + 4274983 tctcaaactc-----ctgacct---tgtgat-ccacctgccttagcctcccaaagtgctgggattgcaggcgtgagccactgtgcccagccctac i colAng1.NW_012111697v1 C 0 I 5 s otoGar3.GL873654 5536436 76 + 5549422 attcaaacccgccagctcacgtgtatgtggc-tggc--gccttagcc---------gcttgagccataggcg-------ccgggccAAGAACTGG i otoGar3.GL873654 C 0 I 1 s canFam3.chr1 4662305 38 - 122678785 tcttgatttc---tgcttcctt---tatggt-ttgcttgcttttg-------------------------------------------------- i canFam3.chr1 I 254 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e dasNov3.JH563638 399803 0 + 643850 C e mm10.chr7 111145668 4122 - 145441459 I e aotNan1.NW_018505377v1 416867 1018 - 4471408 I e cebCap1.NW_016107633v1 1670669 767 - 2680843 I e saiBol1.JH378197 5465519 1545 + 8899380 I e calJac3.chr22 28613187 904 + 49145316 I a score=46835.000000 s hg38.chr19_GL383574v1_alt 137367 4 + 155864 tttt s panTro5.chr19 36204678 4 + 61309027 tttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39948888 4 + 64411610 tttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6360577 4 - 8369475 tttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63957323 4 - 106955855 tttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30273765 4 + 53671032 tttt i rheMac8.chr19 I 5 C 0 s macFas5.chr19 34728039 4 + 59248254 tttt i macFas5.chr19 I 5 C 0 s macNem1.NW_012011689v1 4601816 4 - 13342542 tttt i macNem1.NW_012011689v1 I 5 C 0 s cerAty1.NW_012005268v1 5524934 4 + 7714307 tttt i cerAty1.NW_012005268v1 I 5 C 0 s chlSab2.chr6 29328059 4 + 50890351 tttt i chlSab2.chr6 I 5 C 0 s manLeu1.NW_012102454v1 960637 4 - 2385121 tttt i manLeu1.NW_012102454v1 I 5 C 0 s colAng1.NW_012111697v1 2402448 4 + 4274983 tttt i colAng1.NW_012111697v1 I 5 C 0 s calJac3.chr22 28614091 4 + 49145316 tttt i calJac3.chr22 I 904 C 0 s saiBol1.JH378197 5467064 4 + 8899380 tttt i saiBol1.JH378197 I 1545 C 0 s aotNan1.NW_018505377v1 417885 4 - 4471408 tttt i aotNan1.NW_018505377v1 I 1018 C 0 s otoGar3.GL873654 5536513 3 + 5549422 TTT- i otoGar3.GL873654 I 1 I 120 s canFam3.chr1 4662343 4 - 122678785 tttt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 399803 4 + 643850 tttt i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e mm10.chr7 111145668 4122 - 145441459 I e cebCap1.NW_016107633v1 1670669 767 - 2680843 I a score=280335.000000 s hg38.chr19_GL383574v1_alt 137371 35 + 155864 aaggatgcactat--------ctttccaacactgtctgaggaa s panTro5.chr19 36204682 35 + 61309027 aaggatgcactat--------ctttccaacactgtctgaggaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39948892 35 + 64411610 aaggatgcactat--------ctttccaacactgtctgaggaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6360581 35 - 8369475 aaggatgcactat--------ctttccaacactgtctgaggaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63957327 35 - 106955855 aaggatgcactat--------ctttccaactctgtctgaggaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30273769 35 + 53671032 aaggatgcactat--------ctttccaactctgtctgaggaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34728043 35 + 59248254 aaggatgcactat--------ctttccaactctgtctgaggaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4601820 35 - 13342542 aaggatgcactat--------ctttccaactctgtctgaggaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5524938 35 + 7714307 aaggatgcactat--------ctttccaactctgtctgaggaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29328063 31 + 50890351 aaggatgcactat--------ctttccaac----tctgaggaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 960641 35 - 2385121 aaggatgcactat--------ctttccaactctgtctgaggaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2402452 35 + 4274983 aaggatgcactat--------ctttccaaccctgtctgaggaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28614095 29 + 49145316 aaggatgcactat--------cttt-caac----tctgagga- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5467068 29 + 8899380 aaggatgcactat--------cttt-caac----tcggagga- i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 417889 29 - 4471408 aaggatgcactat--------cttt-caac----tctgagga- i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4662347 31 - 122678785 aaggatgtattat--------ctt---atatctctctgagga- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 399807 42 + 643850 aaggatgcgttgtctgctctgcttctcacatctccctgagga- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 615585 1990 + 2501019 I e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5536516 120 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I e cebCap1.NW_016107633v1 1670669 767 - 2680843 I a score=396543.000000 s hg38.chr19_GL383574v1_alt 137406 32 + 155864 taccagtcagaatttcttttcaggtgtttttt s panTro5.chr19 36204717 32 + 61309027 taccagtcagaacttcttttcaggtgtttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39948927 32 + 64411610 taccagtcagaacttcttttcaggtgtttttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6360616 32 - 8369475 taccagtcagaatttcttttcaggtgtttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63957362 32 - 106955855 taccagtcagaatttcttttcaggtgtttttt i nomLeu3.chr10 C 0 I 306 s rheMac8.chr19 30273804 31 + 53671032 taccagtcagaatttcttttcagatgttttt- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34728078 31 + 59248254 taccagtcagaatttcttttcagatgttttt- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4601855 31 - 13342542 taccagtcagaatttcttttcagatgttttt- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5524973 31 + 7714307 taccagtcagaatttcttttcagatgttttt- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29328094 31 + 50890351 taccagtcagaatttcttttcagatgttttt- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 960676 31 - 2385121 taccagtcagaatttcttttcagatgttttt- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2402487 31 + 4274983 taccagtcagaatttcttttcagatgttttt- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28614124 31 + 49145316 taccagtcagaatttcttttcaggtgttttT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5467097 31 + 8899380 taccagtcagaatttcttttcaggtgttttt- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1671436 31 - 2680843 taccagtcagaatttcttttcaggtgttttt- i cebCap1.NW_016107633v1 I 767 C 0 s aotNan1.NW_018505377v1 417918 31 - 4471408 taccagtcagaatttcttttcaggtgttttt- i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 617575 30 + 2501019 taccagtcagaa-ttcctttcagatgttttt- i proCoq1.NW_012149263v1 I 1990 C 0 s canFam3.chr1 4662378 24 - 122678785 taccagttcaaattttttttcaag-------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 399849 31 + 643850 taccagttagaatttatttttagttgttttt- i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5536516 120 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I a score=1410139.000000 s hg38.chr19_GL383574v1_alt 137438 108 + 155864 ctgggacctaaaatatgtatttcttctgaggtctgatcaccttttcatcttagttgtccttttttgtccttt-tggttttccttcactgtctggtgatccttatcaatg s panTro5.chr19 36204749 108 + 61309027 ctgggacctaaaatatgtatttcttctgaggtctgatcaccttttcatcttagttgtccttttttgtccttt-tggttttccttcactgtctggtgatccttatcaatg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39948959 108 + 64411610 ctgggacctaaaatatgtatttcttctgaggtctgatcaccttttgatcttagttgtccttttttgtccttt-tggttttccttcactgtctggtgatccttatcaatg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6360648 108 - 8369475 ctgggacctaaaatatgtatttcttctgaggtctgatcaccttttcatcttagttgtccttttttgtccttt-tggttttccttcactgtctggtgatctttatcagtg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63957700 108 - 106955855 ctgggacctaaaatatatatttcttctgaggtctgatcaccttttcatattagttgtccttttttgtccttt-tggttttccttcactgtctggtgatccttatcaatg i nomLeu3.chr10 I 306 C 0 s rheMac8.chr19 30273835 108 + 53671032 ctgggacttaaaatatatgtttcttctgaggtctggtcaccttttcatcttagttgtccttttttgtccttt-tggttttccttcactgtctggtgatccttatcaatg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34728109 108 + 59248254 ctgggacttaaaatatatgtttcttctgaggtctggtcaccttttcatcttagttgtccttttttgtccttt-tggttttccttcactgtctggtgatccttatcaatg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4601886 108 - 13342542 ctgggacttaaaatatatgtttcttctgaggtctggtcaccttttcatcttagttgtccttttttgtccttt-tggttttccttcactgtctggtgatccttATCAATG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5525004 108 + 7714307 ctgggacttaaaatatatgtttcttctgaggtctggtcacctttttatcttagttgtccttttttgtccttt-gggttttccttcactgtctggtgatccttATCAATG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29328125 108 + 50890351 ctgggacttaaaatatatgtttcttctgaggtctggtcaccttttcatcttagttgtccttttttgtccttt-tggttttccttcactgtctggtgatccttatcaatg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 960707 108 - 2385121 ctgggacttaaaatacatgtttcttctgaggtctggtcaccttttcatcttagttgtccttttttgtccttt-gggttttcctttactgtctggtgatccttatcaatg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2402518 108 + 4274983 ctgagacttaaaatatatgtttcttctgaggtctggtcaccttttcatcttagttgtccttttttgtccttt-tggttttccttcactgtctggtgatccttatcaatg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28614155 102 + 49145316 CTAGGACCTAAAGTATATGCTTCTTTTGAGGTCTGATCAGCTTTTCATCTTAGTTGTCCTTTTTTGTCCTTT-TGGTTTTCCTTCATTGTCTGGTG------ATCAATG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5467128 108 + 8899380 ctaggacctaaagtatatgtttcttttgaagtctgataagcttttcatcttagttgtccttttttgtccttt-tggttttccttcattgtctgttgatccttatcaatg i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1671467 108 - 2680843 ctaggacctaaagtatatgtttcttttgaagtctgatcagcttttcatcttagttgtccttttttgtccttt-tggttttccttcattgtctggtgatctttatcaatg i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 417949 108 - 4471408 ctaggacctaaagtatgcgtttcttttgaagtctgatcagcttttcatcttagttgtccttttttgttattt-tggttttccttcgttgtctggtgatccttATCAATG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 617605 107 + 2501019 ctgggacctaaaatacatgtttcttccttggtttggtcagcttttcatcttaattgtcctttattgtgctct-tagttttccttcactatctggt-atctttatcagtg i proCoq1.NW_012149263v1 C 0 I 1 s canFam3.chr1 4662402 105 - 122678785 ----gacccgaaatatatgtttcttttggagtctgatctgcttttcatcttagttgtcctttattgccctttggggtttttcctggctgtctggtgatccttATCAGTG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 399880 103 + 643850 ctgggacttataataca-gttttctttggggtctgattgctttttcaccttagtt----ctttttgtcttct-tggttttcctccactatctgatgatccttaatgatt i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3999820 2539 - 30143674 I e otoGar3.GL873654 5536516 120 + 5549422 I e mm10.chr7 111145668 4122 - 145441459 I a score=258326.000000 s hg38.chr19_GL383574v1_alt 137546 18 + 155864 aagaactgggttgttcat s panTro5.chr19 36204857 18 + 61309027 aagaactgggttgttcat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39949067 18 + 64411610 aagaactgggttgttcat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6360756 18 - 8369475 aagaactgggttgttcat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63957808 18 - 106955855 aagaactgggttgctcat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30273943 18 + 53671032 aagaactgggttgtttat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34728217 18 + 59248254 aagaactgggttgtttat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4601994 18 - 13342542 AAGAACTGGGTTGTTTAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5525112 18 + 7714307 AAGAACTGGGTTGTTTAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29328233 18 + 50890351 aagaactgagttgtttat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 960815 18 - 2385121 aagaactgggttgtttat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2402626 18 + 4274983 aagaactgggttgtttat i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28614257 18 + 49145316 AAGAACTGCGTTGTTTAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5467236 18 + 8899380 aagaactgggtcatttat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1671575 18 - 2680843 aagaattgggttgtttat i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 418057 18 - 4471408 AAGAACTGGGTTGTTTAT i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 617713 18 + 2501019 aggaactgggttttttat i proCoq1.NW_012149263v1 I 1 C 0 s otoGar3.GL873654 5536636 18 + 5549422 AAGAACTGGGTTTTTTAT i otoGar3.GL873654 I 120 C 0 s canFam3.chr1 4662507 18 - 122678785 AAGAAGTGGGTTGATAAT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 399983 18 + 643850 gggggctgagttagttat i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3999820 2539 - 30143674 I e mm10.chr7 111145668 4122 - 145441459 I a score=984386.000000 s hg38.chr19_GL383574v1_alt 137564 70 + 155864 at--aggtaatttgcagga-ggtccctctgTTTTTC-AATAGTCCTCTTGCCTTAGTGAGAGTTGGCTGATTGA s panTro5.chr19 36204875 70 + 61309027 at--aggtaatttgcagga-ggtccctctgTTTTTC-AATAGTCCTCTTGCCTTAGTGAGAGTTGGCTGATTGA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39949085 70 + 64411610 at--aggtaatttgcagga-ggtccctctgTTTTTC-AATAGTCCTCTTGCCTTAGTGAGAGTTGGCTGATTGA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6360774 69 - 8369475 at--aggtaatttgcagga-ggtccctctgTTTTTC--ATAGTCCTCTTGCCTTAGTGAGAGTTGGCTGATTGA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63957826 70 - 106955855 at--aggtaatttgcagaa-gttccctctgTTTTTC-AATAGTCCTCTTGCCTTAGTGAGAGTTGGCTGATTGA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30273961 71 + 53671032 at--aggtaatttgcagga-ggtacctctgTTTTTCCAATAGTCCTCTTGCCTTAGTGAGGATTGGCTGATTGA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34728235 71 + 59248254 at--aggtaatttgcagga-ggtacctctgtttttccaatagtcctcttgccttagtgaggattggctgattgA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4602012 71 - 13342542 AT--AGGTAATTTGCAGGA-GGTACCTCTGTTTTTTCAATAGTCCTCTTGCCTTAGTGAGGATTGGCTGATTGA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5525130 71 + 7714307 AT--AGGTAATTTGCAGGA-GGTACCTCTGTTTTTCCAATAGTCCTCTTGCCTTAGTGAGGATTGGCTGATTGA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29328251 71 + 50890351 gt--aggtaatttgcagga-ggtacctctgtttttccaatagtcctcttgccttagtgaggattggctgattgA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 960833 71 - 2385121 at--aggtaatttgcagga-ggtacctctgtttttccaatagtcctcttgccttagtgaggattggctgattgA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2402644 71 + 4274983 ac--aggtaatttgcagga-ggtccccctgTTTTTCCAGTAGTCCTCTTGCCTTAGTGAGAGTTGGCTGATTGA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28614275 73 + 49145316 GTGCAGGTAATTTGCAGGA-GTTCCATCTGTTTTCCCAATAGTCCTCTTGCCTTAGTGAGAGTTGGCTGATTCA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5467254 71 + 8899380 gt--aggtaatttgcagga-gttccctctgttctcccaatagtcctcttgccttagtgagagttggctgattCA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1671593 71 - 2680843 gt--aggtaatttgcagga-gttccctctgttttcccaatagtcttcttgctttagtgagagttggctgattCA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 418075 71 - 4471408 GT--AGGTAATTTGCAAGA-GTTCCCTCTGTTTTCCCAATAGTCCTCTTGCCTTAGTGAGAGTTGGCTGATTCA i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 617731 66 + 2501019 at--tggtgattggcagga-ggtccccctgttgttCCAGCAGTCCTCTTGC-----TGGGAGTTGGCTGATTGA i proCoq1.NW_012149263v1 C 0 I 7 s otoGar3.GL873654 5536654 72 + 5549422 AT--GGGTGATTGGTAGGACAGATACTCTGTTGTTCGTGCAGTCCTCTTGCCCTGTTGGGAGTTGGCTGATTGA i otoGar3.GL873654 C 0 I 7 s mm10.chr7 111149790 67 - 145441459 AT--AGGTAATTGGTAAGA-GGTTCCTCT----TTCTGGCAATCCTGTCTCCTTTGTGAGGGCTGGCTAACTTG i mm10.chr7 I 4122 C 0 s canFam3.chr1 4662525 68 - 122678785 AC--AGATAATTGAGAAGA-GGTTC--TTGTTTTTCCAGCAGTCCCTTTGCC-TGGTAGGAGTTGGCTGAGTGA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 400001 71 + 643850 at--aggtaattggcagga-ggttctgctgtttttccagcagtcctcttacctcagtgggagttgactgATTCA i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 3999820 2539 - 30143674 I a score=6048744.000000 s hg38.chr19_GL383574v1_alt 137634 382 + 155864 G--------GAATGGGAAGTACAGATGAAATCAGGTTGATTAACTGGTTT--cccactcctgatttctctacctgctgattcaaagctg----ggcatttatccagctcctccaggaaaaagggctctgcctctctgttctcttttggccctgcatgttgtaaaaagtggccagctttgctctggtctgtcttgtaatatagtttcctctgctttctctccatcctctagaagatggcctgcagtt----------------------------------aaatagactgtggcc-ctcagacc-ttctcattactgttttgctgagattccctt----gtgaatgtctttattgttatgtcactgggatttggggaggatggagagg----taagtgcacttgcctgtt----tagcctgtcgttttgaaatgaaaCTCCTTT s panTro5.chr19 36204945 389 + 61309027 GTGATCA-GGAATGGGAAGTACAGATGAAATCAGGTTGATTAACTGGTTT--cccactcctgatttctgtacctgctgactcaaagctg----ggcatttatccagctcctccaggaaaaagggctctgcctctctgttctcttttggccctgcgtgttgtaaaaagtggccagctttgctctggtctgtcttgtaatatagtttcctctgctttctctccatcctctagaagatggcctgcagtt----------------------------------aaatagactgtggcc-ctcagacc-ttctcattactgttttgctgagattccctt----gtgaatgtctttattgttatgtcactgggatttggggacgatggagagg----taagtgcacttgcctgtt----tagcctgtcgttttgaaATGAAGCTCCTTT i panTro5.chr19 C 0 I 1 s panPan2.chr19 39949155 389 + 64411610 GTGATCA-GGAATGGGAAGTACAGATGAAATCAGGTTGATTAACTGGTTT--cccactcctgatttctctacctgctgactcaaagctg----ggcatttatccagctcctccaggaaaaagggctctgcctctctgttctcttttggccctgcgtgttgtaaaaagtggccagctttgctctggtctgtcttgtaatatagtttcctctgctttctctccatcctctagaagatggcctgcagtt----------------------------------aaatagactgtggcc-ctcagacc-ttctcattactgttttgctgagattccctt----gtgaatgtctttattgttatgtcactgggatttggggacgatggagagg----taagtgcacttgcctgtt----tagcctgtcgttttgaaATGAAGCTCCTTT i panPan2.chr19 C 0 I 1 s gorGor5.CYUI01015150v1 6360843 385 - 8369475 GTGATCA-GGAATGGGAAGTACAGATGAAATCAGGTTGATTAACTGGTTT--CCCACTCCTGATTTCTCTACCTGCTGATTCAAAGCTG----GGCATTTATCCAGCTCCTCCAGGAAAAAGGGCTCTGCCTCTCTGTTCTCTTTTGGCCCTGCATGTTGTAAAAAGTGGCCAGCTTTGCTCTGGTCTGTCTTGTAATATAGTTTCCTCTGCTTTCTCTCCATCCTCTAGAAGATGGCCTGCAGTT-----------------------------------AATAGACTGTGGCC-CTCAGACC-TTCTCATTACTGTTTTGCTGAGATTCCCTT----GTGAATGTCTTTA---TTACGTCACTGGGATTTGGGGAGGATGGAGAGG----TAAGTGCACTTGCCTGTT----TAGCCTGTCGTTTTGAAATGAAGCTCCTTT i gorGor5.CYUI01015150v1 C 0 I 1 s nomLeu3.chr10 63957896 387 - 106955855 GTGATCA-GGAATGGGAAGTACAGATGAAAACAGGTTGATTAGCCGGTTT--cccactcctgatttctctacctgctgactcaaagctg----ggcatttatccagctcctccaggaaaaagggctctgcctctctgtcctcttttggccctgcatgttgcaaaaagtggccagctttgctctggtctgtcttgtaatagagtttcctctgctttctctccatcctctagaaaatggcctgcagtt----------------------------------aaatagac--tggcc-ctcagacc-ttctcattactgttttgctgagattccctt----gtgaatgtctttattgttatgtcactgggatttggggaggatggagagg----taagtgcgcttgcctgtt----tagcctgtcgttttgaaATGAAGCTCCTTT i nomLeu3.chr10 C 0 I 1 s rheMac8.chr19 30274032 389 + 53671032 ----TCA-GGAATGGGAATTACAGATGAAATCAGGTTGATTAGCCAGTTT--CGCACTCCTGATTTCTATACCTGCTGACTCAAAGCTG----GGCATTTATCCAGCTCCTCCAGGAAAAAGCGCTCTGCCTCTCTGTCCTCTTTTGGCCCCACGTGTTCTAAAAAGTGGCCAGCTTTGCTCTGGTCTGTCTTGTAATATAGGTTCCTCTGCTTTCTCTCCATTCTCTGGAAAATGGCCTGCAGTT----------------------------------AAATAGACTGTGGCC-CTCAGACC-TTCTCATTACTGTTTTGCTGAGATTCCCTT----GTGAATGTCTTTATTGTTAAGTCGCTGGGATTTGGGGAGGATGGAGAGG----TAAGTGCACGTGCCTGTTTATTTAGCCTGTTGTTTTGAAATGAGGCCCCTTT i rheMac8.chr19 C 0 I 1 s macFas5.chr19 34728306 389 + 59248254 ----TCA-GGAATGGGAATTACAGATGAAATCAGGTTGATTAGCCAGTTT--CGcactcctgatttctatacctgctgactcaaagctg----ggcatttatccagctcctccaggaaaaagcgctctgcctctctgtcctcttttggccccacgtgttctaaaaagtggccagctttgctctggtctgtcttgtaatataggttcctctgctttctctccattctctggaaaatggcctgcagtt----------------------------------aaatagactgtggcc-ctcagacc-ttctcattactgttttgctgagattccctt----gtgaatgtctttattgttaagtcgctgggatttggggaggatggagagg----taagtgcacgtgcctgtttatttagcctgttgttttgaaATGAGGCCCCTTT i macFas5.chr19 C 0 I 1 s macNem1.NW_012011689v1 4602083 389 - 13342542 ----TCA-GGAATGGGAATTACAGATGAAATCAGGTTGATTAGCCAGTTT--CGcactcctgatttctatacctgctgactcaaagctg----ggcatttatccagctcctccaggaaaaagcgctctgcctctctgtcctcttttggccccacgtgttctaaaaagtggccagctttgctctggtctgtcttgtaatataggttcctctgctttctctccattctctggaaaatggcctgcagtt----------------------------------aaatagactgtggcc-ctcagacc-ttctcaatactgttttgctgagattccctt----gtgaatgtctttattgttaagtcgctgggatttggggaggatggagagg----taagtgcacgtgcCTGTTTATTTAGCCTGTTGTTTTGAAATGAGGCCCCTTT i macNem1.NW_012011689v1 C 0 I 1 s cerAty1.NW_012005268v1 5525201 389 + 7714307 ----TCA-GGAATGGGAATTACAGATGAAATCAGGTTGATTAGCCAGTTT--CACACTCCTGATTTCTATACCTGCTGACTCAAAGCTG----GGCATTTATCCAGCTCCTCCAGGAAAAAGCGCTGTGCCTCTCTGTCCTCTTTTGGCCCCACGCGTTCTAAAAAGTGGCCAGCTTTGCTCTGGTCTGTCTTGTAATATAGGTTCCTCTGCTTTCTCTCCATTCTCTGGAAAATGGCCTGCAGTT----------------------------------AAACAGACTGTGGCC-CTCAGACC-TTCTCATTACTGTTTTGCTGAGATTCCCTT----GTGAATGTCTTTATTGTTAAGTCGCTGGGATTTGGGGAGGATGGAGAGG----TAAGTGCACGTGCCTGTTTATTTAGCCTGTTGTTTTGAAATGAGTCCCCTTT i cerAty1.NW_012005268v1 C 0 I 1 s chlSab2.chr6 29328322 389 + 50890351 ----TCA-GGAATGGGAATTACAGATGAAATCAGGTTGATTAGCCAGTTT--CGcactcctgatttctatacctgctgactcaaagctg----gacatttatccagctcctccaggaaaaagggctctgcctctctgtcctcttttggccccacgcgttctaaaaagtggccagctttgctctggtctgtcttgtaatataggttcctctgctttctctccatcctctggaaaatggcctgcagtt----------------------------------aaatagactgtggcc-ctcagacc-ttctcgttattgttttgctgagattccctt----gtgaatgtctttattgttaagtcactgggatttggggaggatggagagg----taagtgcacgtgcctgtttatgtagcctgttgttttgaaatgaagccTCTTT i chlSab2.chr6 C 0 I 1 s manLeu1.NW_012102454v1 960904 389 - 2385121 ----TCA-GGAATGGGAATTACAGATGAAATCAGGTTGATTAGCCAGTTT--CACACTCCTGATTTCTATACCTGCTGACTCAAAGCTG----GGCATTTATCCAGCTCCACCAGGAAAAAGCGCTCTGCCTCTCTGTCCTCTTTTGGCCCCACGCGTTCTAAAAAGTGGCCAGCTTTGCTCTGGTCTGTCTTGTAATATAGGTTCCTCTGCTTTCTCTCCATTCTCTGGAAAATGGCCTGCAGTT----------------------------------AAATAGACTGTGGCC-CTCAGACC-TTCTCATTACTGTTTTGCTGAGATTCCCTT----GTGAATGTCTTTATTGTTAAGTCGCTGGGATTTGGGGAGGATGGACAGG----TAAGTGCACGTGCCTGTTTATTTAGCCTGTTGTTTTGAAATGAGGCCCCTTT i manLeu1.NW_012102454v1 C 0 I 1 s colAng1.NW_012111697v1 2402715 389 + 4274983 ----TCA-GGAATGGGAATTACAGATGAAATCAGGTTGATTAGCCAGTTT--CAcactcctgatttctatacctgctgactcaaagctg----ggcgtttatccagctcctccaggaaaaagggctctgcctctctgtcctcttttggccccacgtgttctaaaaagtggccagctttgctctggtctgtcttgtaatataggttcctctgctttctctccatcctctggaaaatggcctgcagtt----------------------------------aaatagactgtggcc-ctcagact-ttcttattactgttttgctgagattccctt----gtgaatgtctttattgttaagtcactgggatttggggaggatggagagg----taagttcacgtgcctgtttatttagcctgttgttttgaaatgaagccCCTTT i colAng1.NW_012111697v1 C 0 I 1 s calJac3.chr22 28614348 393 + 49145316 GTGATCA-GGAATGGGAAATACAGAGCAAATCAGGTTGATTAGCCACTTT--CCCACTCCGTATTTCTATACCTGCTGACTCAAAGCTG----GGCATTTATCCAGCCCCTCCAGGAAAAAGGATTCTGCCTCTCTGTCATCCTTTGGCCCTGCATGTTCTAGAAAGTGGCCGGCTTTGCTCTGGTCTGTCTTGTAATATAGTTTCCTCTGCTTTCTCTCCATCTTCTAGAAAATGGCCTGCATTT----------------------------------AAATAGACTGTGGCC-CTCAGACC-TTTTTATTACTGTTTTGCTGCAATTCCCTT----GTGAATGTCTTTATTGTTATGTCATTGGGATTTGGGGAGGATGGGGAGG----TAAGTGCACGTGCCTGTTTATTTAGCCTGTTGTTTTGAAATGAAGCTCCATT i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5467325 394 + 8899380 GTGATCA-GGAATGGGAAATACAGATCAAATCAGGTTGATTAGCTGCTTT--CCCACTCTGTATTTCTATACCTGCTGACTCAAAGCTG----GGCATTTATCCAGCCCCTCCAGGAAAAAGGATTCTACCTCTCTGTCATCCTTTGGCCCTGCATGGTCTAGAAAGTGCCCAGCTTTGCTCTGGTCTGTCTTGTAATATAGTTTCCTCTGCTTTCTCTCCA---TCTAGTAAATGGCCTGCATTT----------------------------------AAATAGACTGTGGCC-CTCAGACC-TTTTTATTACTGTTTTGCTGCAGTTCCCTT----GTGAATGTCTTTATTGTTATGTCATTGGGATTTGGGGAGGATGGGGAGGTAATTAATTGCACATGCCTGTTTATTTAGCCTATCGTTTTGAAATGAAGCTCCATT i saiBol1.JH378197 C 0 I 313 s cebCap1.NW_016107633v1 1671664 392 - 2680843 GTGATCA-GGAATGGGAAATACAGATCAAATCAGGTTGATTAGCCACTTT--cccactctgtatttctatacctgctgactcaaagctg----ggcatttatccagccccttcaggaaaaaggattctgcctctctgtcatcc-ttggccctgcatgttctagaaagtgcccagctttactctggtctgtcttgtaatatagtttcctctgctttctctccatcttctagaaaatggcctgcattt----------------------------------aaatagactgtggcc-ctcagacc-tttttattactgttttgctgcagttccctt----gtgaatgtctttattgttatgtcattgggatttggggaggatggggagg----taattgcacatgcctgtttgtttagcctgtcgttttgaaATGAAGCTCCATT i cebCap1.NW_016107633v1 C 0 I 1 s aotNan1.NW_018505377v1 418146 394 - 4471408 GTGACCA-GGAATGGGAAATACAGATCAAATCAGGTTGATTAGCCACTTT--cccactccatatttctatacctgctgactcaaagctg----ggcatttatccagcccctccaggaaaaaggattctgcctctctgtcatcctttggccctgcatattctagaaagtggccagctttgctctggtctgtcttgtaatatagtttcctctgctttctctccatcttctagaaaatggcctgcattt----------------------------------aaatagactgtggcc-cttagaccttttttattactgttttgctgcaattccctt----gtgaatgtctttattgttaggtcattgggatttggggaggatggggagg----taagttcatgtgcctgtttatttagcctgtcattttgaaATGAAGCTCCATT i aotNan1.NW_018505377v1 C 0 I 1 s micMur3.chr22 4002359 388 - 30143674 --------GGAGTGGAAAGTACAAATGAGATCAGGTtgattactctgttt--cccactcctgatttttgtacctgctgactcaaagctg----ggcatttctccagtgcctgcagggaaaagggctctgcctctctgcactcctttggccttgcatgtcctaggaagtggccagctttgctctggtctgtcttgtaatacaatttcctccgctttctctctgccgtctagaaaatggccagtattt----------------------------------aaatagactgtggcc-ctcagacc-ttttcattactattatgctgtgattccctcatgaatgaatgtctgtactgttatatcactgggatttggggaggatggggagg----taagtgcatatgcctatt--tttagcctgtcatcttgaaaggaagcTCCTTC i micMur3.chr22 I 2539 I 1 s proCoq1.NW_012149263v1 617804 388 + 2501019 --------GGAGTGGAAAGTACAGATGAGATCAGGTTGATTAGTCTGTTT--CCCACTCCTGATTTTTGTACCTGCTGACTCAAAGCTG----GGCATTTCTCCAGCGCCTGCAGGAAAAAGGGCTCTGCCTCTCTGCCCTCCTTTGGCCCTGCACGTCCTAGGAGGTGGCCAGCTTCGCTGTGATCTGCCTTGTAGTACAGTTTCCTCTGCTTTCTCGCCGTCGTCTAGAAAATGGCCAGCATTT----------------------------------AAATAGACTGTGGCC-TTCAGACC-TTCTCCTTACTGTTATGCTGTGATTCCCTCATGAATGAATGAATGTActgttatgtcactgggatttggggaggatggggagg----tgggtgcatatgcctata--tttagcctgtcatcttgaaaggaagcTCCTTT i proCoq1.NW_012149263v1 I 7 I 1 s otoGar3.GL873654 5536733 377 + 5549422 --------GGAGTGGAAAGTACAGATGAGATCAGGTTGATTAGTCTATTT--CCCACTTGTGATTTTTGTACCTGCTGACTCAAAGGTGGGCAGGCATTTACCCAGCTCCTCCAGG-AAAAGGACTCTTCCTCCATGCCCTCctttgaccctgcatgtcctaggaagtggctagctttact-tggtctgtcttgtaatacaattgcttctgccttctctccatcttctagaaaatggccagtattt----------------------------------aaatggattatggcc-ttcagact-ttctcatcactattaca-tgtgattccctcattagtgaatggctttactg-tatgtcactgggatttggggaggat-gggagg----tcagtgcatgtgcC-------TTGAAATGTCTCCTT-----GAAGCTCCTTT i otoGar3.GL873654 I 7 I 1 s mm10.chr7 111149857 359 - 145441459 GTGATCA-G--ATGGGAAGTATGGAAGAGATGAAACTGATTAGATTGTTT--CCCACTCCTGATCTCTGTAGCTGTCCATTTAGAGCTG----GGCACTTACCCAGCTCCTCCAGGAAGCATTGCT-TACCTCATTGTGCCCCTTTGGCTCTGTGGGATCTAGGAAGTGGTCAGCTCTGCTGTGTTGTATCTCAGAATACAACATTTCCTGA--GCTCTCTGTCTCCTCAGCAGTAGCTCACATTT----------------------------------AAATAGACCATGGC---TCAAACC-TTC------CTGTTAGGCTGTGATTCTCTC----GTGAAGAGCTTTACCATTAGGCTACCTGGG-TTGGAGAGAAT-GCCAAG----TAAG---------CTGTT----------GTGGTCCTAGAGTGAATCTCCTTG i mm10.chr7 C 0 C 0 s canFam3.chr1 4662593 428 - 122678785 GTTACCA-GGAGTGAGAAGTGTGGAGGAGATCAGGTTGATGAACCTATCTCCCCCATTCCTGATTTCTGTACCTGCTGACTCAAAGCTG----GGCGTTTATCCAGCTCCTCCAGGAAAAAGGGCTCTGCCTCTCTGCCTGCCTTTGGCTCTGCATGTCCTGGGAAATGTCCAGCTCTGCTGTGGTCTGTCGTGTCATAC-GTTCCCTCTGCTTTCTCTTCGTCTTCTAGAAAGTAAGCAGCAtttttttttttttttttttttttAGTAAGCAGCATTTAAAGAGACTATATCC-CTCAGCCC-TTCTCGTTACTGTTTTGTTGTGATTCCCTT----GTGAATGTCTTTAGTGTTCTGTCATTAGGATTTGGGGCCAGTGGGAAGG----TAAGTATATGCGCCTATTTATTTAGCCTGTCATCTTGAAATGAAGCTACTTT i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 400072 380 + 643850 GAGATCATGAGGGGGGAAGTGTGGATGAGATCCAGTTGATTATCCTTTTT-CCCCACTCCTCATCTCTGTACCAGCTGACTACCAGCTG----TACATTTATCCAGCTCCTCCAGGCAAAAGGGCTCTGCCTCTGTGCCCTCCTTTGGTTCTGCCTGCTCT-GGAAGTGGCTAACTCTGCTCTGATCTGTCTTGTAATACAGTTTCCTCTGTTATCTTTCCATCTTCTAGAAAGTGGCTGGCATTT----------------------------------AAATAAACTATGGCTATTCAGACC-TTCTC-TTACTATTTTGCTATAATTTCCTT----GTGAATATCTTTAT------GTCATTGCGA--------AGGTGGAAAGG----TTAGTGACTGTGGCTATTTAGTTAGCGTGGCATCTTGAAATGAAGCTCCTTT i dasNov3.JH563638 C 0 I 1 a score=1125632.000000 s hg38.chr19_GL383574v1_alt 138016 73 + 155864 TGTCATCCCATTTCTGACAGTAGGACTGCTTGCCACTCTC-TTTTCTCTGTTGGT----TTAAGGACTGAAGTGGATC s panTro5.chr19 36205335 73 + 61309027 TGTCATCCCATTTCTGACAGCAGGACTGCTTGCCACTCTC-TTTTCTCTATTGGT----TTAAGGACTGAAGTGGATC i panTro5.chr19 I 1 C 0 s panPan2.chr19 39949545 73 + 64411610 TGTCATCCCATTTCTGACAGCAGGACTGCTTGCCACTCTC-TTTTCTCTATTGGT----TTAAGGACTGAAGTGGATC i panPan2.chr19 I 1 C 0 s gorGor5.CYUI01015150v1 6361229 73 - 8369475 TGTCATCCCATTTCTGACAGCAGGACTGCTTGCCACTCTC-TTTTCTCTATTGGT----TTAAGGACTGAAGTGGATC i gorGor5.CYUI01015150v1 I 1 C 0 s nomLeu3.chr10 63958284 73 - 106955855 TGTCATCCCATTTCTGACAGCAGGACTGCTTGCCACTCTC-TTTTCTTTATTGGC----TTAAGGACTGAAGTGGATC i nomLeu3.chr10 I 1 C 0 s rheMac8.chr19 30274422 77 + 53671032 TGTCATCCCATTTCTGACAGCAGGACTGCTTGCCACTCTG-TTTTCTCTATTGGCTTAATTAAGGACTGAAATGGATC i rheMac8.chr19 I 1 C 0 s macFas5.chr19 34728696 77 + 59248254 TGTCATCCCATTTCTGACAGCAGGACTGCTTGCCACTCTG-TTTTCTCTATTGGCTTAATTAAGGACTGAAATGGATC i macFas5.chr19 I 1 C 0 s macNem1.NW_012011689v1 4602473 77 - 13342542 TGTCATCCCATTTCTGACAGCAGGACTGCTTGCCACTCTG-TTTTCTCTATTGGCTTAATTAAGGACTGAAATGGATC i macNem1.NW_012011689v1 I 1 C 0 s cerAty1.NW_012005268v1 5525591 77 + 7714307 TGTCATCCCATTTCTGACAGCAGGACTGCTTGCCACTCTG-TTTTCTCTATTGGCTTAATTAAGGACTGAAATGGATC i cerAty1.NW_012005268v1 I 1 C 0 s chlSab2.chr6 29328712 77 + 50890351 TGTCGTCCCATTTCTGACAGCAGGACTGCTTGCCACTCTG-TTTTCTCTATTGGCTTAATTAAGGACTGAAATGGATC i chlSab2.chr6 I 1 C 0 s manLeu1.NW_012102454v1 961294 77 - 2385121 TGTCATCCCATTTCTGACAGCAGGACTGCTTGCCACTCTG-TTTTCTCTATTGGCTTAATTAAGGACTGAAATGGATC i manLeu1.NW_012102454v1 I 1 C 0 s colAng1.NW_012111697v1 2403105 77 + 4274983 TGTCATCCCATTTCTGATAGCAGGACTGCTTGCCACTCTG-TTTTCTCTATTGGCTTAATTAAGGACTGAAATGGATC i colAng1.NW_012111697v1 I 1 C 0 s calJac3.chr22 28614742 73 + 49145316 TGTCATCCCATTTCTGACAGCAGGACTGGTTGCCACCCTG-TTTTCTCTATTGGC----TTAAGGACTAAAATGGATC i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5468032 73 + 8899380 TGTTATCCCATTTCTGACAGCAGGACTGGTTGCCACCCTG-TTTTCTCTATTGGC----TTAAGGACTAAAATGGATC i saiBol1.JH378197 I 313 C 0 s cebCap1.NW_016107633v1 1672057 73 - 2680843 TGTCATCCCATTTCTGACAGCAGGACTGGTTGCCACCTTG-TTTTCTCTATTGGC----TTAAGGACTAAAATGGATC i cebCap1.NW_016107633v1 I 1 C 0 s aotNan1.NW_018505377v1 418541 73 - 4471408 TGTCATCCCACTTCTAACAGCAGGATTGGTTGCCACCCTG-TTTTCTCTATTGGC----TTAAGGACTAAAATGAGTC i aotNan1.NW_018505377v1 I 1 C 0 s micMur3.chr22 4002748 72 - 30143674 TGCCATACCATTGCTGACACGAGGACTGCTTGCTACTCCC-TTTTCTCTGTTGGC----TTAATGACTG-AATGGGTT i micMur3.chr22 I 1 C 0 s proCoq1.NW_012149263v1 618193 71 + 2501019 TGCCATACCATTGCTGACAC-AGGACTGCTTGCCACTCCC-TTTTCTCTGTTGGC----TTAGTGACTG-AGTGGATT i proCoq1.NW_012149263v1 I 1 C 0 s otoGar3.GL873654 5537111 73 + 5549422 TACCATACCATTACTGACTTACTGAGGGCTTGCCATTCCA-TTTTCTCTGTTGGC----TTACTGACTGAAATAGatt i otoGar3.GL873654 I 1 I 607 s mm10.chr7 111150216 73 - 145441459 TGCCTGTTCATTGCTGACAGCAGAACTGTTTGCTGCTCTG-TGTTCTCTGTTGCC----TGAACGAATGAAATGAACT i mm10.chr7 C 0 C 0 s canFam3.chr1 4663022 74 - 122678785 TGCCATACTATTACGGACAACAGGACTGCTTTTCATTCCCATTTTCTCTGCTGGC----TTAATGACTGAAATGGATT i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 400453 70 + 643850 TGTCATGTCATTGCTGATG--AGGACTGCTTGCCATTCCG-TTTTCTCCATTGGC----TTAAAGATTGAAATCGAT- i dasNov3.JH563638 I 1 C 0 a score=4276414.000000 s hg38.chr19_GL383574v1_alt 138089 309 + 155864 TAAAATTATTCTCTG---------------------------------------------------------------------------------------TATTCACAAATCATAGCTATCAATCTTTAGTCAGATGGGAAAACTTAAT-TAATTAA-TTCAGGGACTAAATTTCTCTTTATAGC-TGCATAGTCCA-TGT-AAGTAGAAGTTAGTTATCAATGAAGTGTGTGATGCTTCCTGCCCT---GCGATTGGTAGATTTCTATTTGGTTCAAGGATTGGGTAACTTTTCAAGACCTTTCCTGTTTGTCAGTGACTTTTTT-CCAGAGAAGCAGAAATAACAAGGCCTGCTT-CCTTTGCTTGCTTTGTGGGAATGATAATATCatcatcatcaaaca--t s panTro5.chr19 36205408 310 + 61309027 TAAAATTATTCTCTG---------------------------------------------------------------------------------------TATTCACAAATCACAGCTATCAATCTTTAGTCAGATGGGAAAACTTAAT-TAATTAA-TTCAGGGACTAAATTTCTCTTTATAGC-TGCATAATCCA-TGT-AAGTAGAAGTTAGTTATCACTGAAGTGTGTGATGCTTCCTGCCCT---GCGATTGGTAGATTTCTATTTGGTTCAAGGATTGGGTAACTTTTCAAAACCTTTCCTGTTTGTCAGTGACTTTTTTTCCAGAGAAGCAGAACTAACAAGGCCTGCTT-CCTTTGCTTGCTTTGTGGGAATGATAATATCatcatcatcaaaca--t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39949618 310 + 64411610 TAAAATTATTCTCTG---------------------------------------------------------------------------------------TATTCACAAATCACAGCTATCAATCTTTAGTCAGATGGGAAAACTTAAT-TAATTAA-TTCAGGGACTAAATTTCTCTTTATAGC-TGCATAATCCA-TGT-AAGTAGAAGTTAGTTATCACTGAAGTGTGTGATGCTTCCTGCCCT---GCGATTGGTAGATTTCTATTTGGTTCAAGGATTGGGTAACTTTTCAAGACCTTTCCTGTTTGTCAGTGACTTTTTTTCCAGAGAAGCAGAACTAACAAGGCCTGCTT-CCTTTGCTTGCTTTGTGGGAATGATAATATCATCATCATCAaaca--t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6361302 309 - 8369475 TAAAATTATTCTCTG---------------------------------------------------------------------------------------TATTCACAAATCATAGCTATCAATCTTTAGTCAGATGGGAAAACTTAAT-TAATTAA-TTCAGGGACTAAATTTCTCTTTATAGC-TGCATAGTCCA-TGT-AAGTAGAAGTTAGTTATCACTGAAGTGTGTGATGCTTCCTGCCCT---GTGATTGGTAGATTTCTATTTGGTTCAAGGATTGGGTAACTTTTCAAGACCTTTCCTGTTTGTCAGTGACTTTTTT-CCAGAGAAGCAGAAATAACAAGGCCTGCTT-CCTTTGCTTGCTTTGTGGGAATGATAATATCatcatcatcaaaca--t i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63958357 303 - 106955855 TAAAATTATTCTCTA---------------------------------------------------------------------------------------TATTCACAAATCATAGCTGTCAATCTTTAGTCAGATGGGAAAAC----T-TAATTAA-TTCAGGGATTAAATTTCTCTTTATAGC-TGCATAGTCCATTGT-AAGTAGAAGTTAGTTATCACTGAAGTGTATGATGCTTCCTGCACT---GCGATTGGTAGATTTCTATTTGCTTCAAGGATTGGGTAACTTTTCAAGACCTTTCCTGTTTGTCAGTGACTTTTTT-CCAGAGAAGCAGAAATAACAAGGCCTGCTT-CCTTTGCTTGCTTTGTGGGAATGATAAT---ATCATCATCAaaca--t i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30274499 306 + 53671032 TAAAATTATTCTCTG---------------------------------------------------------------------------------------TATTCACAAATCATAGCTATCAGTCTTTAGTCAGATGGGAAAAC----T-TAATTAATTTCAGGGATTAAATTTCTCTTTATAGC-TGCATGGTCCA-TGT-AAGTAGAAGTTAGTTATCACTGAAGTGTGTGATGCTTCCTGCCCT---GCGATTGGTAGATTTCTATTTGGTTCAGGGATTGGGTAACTTTTCAAGACCTTTCTGGTTTGTCAGTAACTTTTTT-CCAGAGAAGCAGAAATAACAAGGTCTGCTT-CCTTTGCTTGCTTTGTGGAAATGataataacatcatcatcaaaca--t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34728773 305 + 59248254 TAAAATTATTCTCTG---------------------------------------------------------------------------------------TATTCACAAATCATAGCTATCAGTCTTTAGTCAGATGGGAAAAC----T-TAATTAA-TTCAGGGATTAAATTTCTCTTTATAGC-TGCATGGTCCA-TGT-AAGTAGAAGTTAGTTATCACTGAAGTGTGTGATGCTTCCTGCCCT---GCGATTGGTAGATTTCTATTTGGTTCAGGGATTGGGTAACTTTTCAAGACCTTTCTGGTTTGTCAGTAACTTTTTT-CCAGAGAAGCAGAAATAACAAGGTCTGCTT-CCTTTGCTTGCTTTGTGGAAATGataataacatcatcatcaaaca--t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4602550 305 - 13342542 TAAAATTATTCTCTG---------------------------------------------------------------------------------------TATTCACAAATCATAGCTATCAGTCTTTAGTCAGATGGGAAAAC----T-TAATTAA-TTCAGGGATTGAATTTCTCTTTATAGC-TGCATGGTCCA-TGT-AAGTAGAAGTTAGTTATCACTGAAGTGTGTGATGCTTCCTGCCCT---GCGATTGGTAGATTTCTATTTGGTTCAGGGATTGGGTAACTTTTCAAGACCTTTCTGGTTTGTCAGTAACTTTTTT-CCAGAGAAGCAGAAATAACAAGGTCTGCTT-CCTTTGCTTGCTTTGTGGAAATGataataacatcatcatcaaaca--t i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5525668 305 + 7714307 TAAAATTATTCTCTG---------------------------------------------------------------------------------------TATTCACAAATCATAGCTATCAGTCTTTAGTCAGATGGGAAAAC----T-TAATTAA-TTCAGGGATTAAATTTCTCTTTATAGC-TGCATGGTCCA-TGT-AAGTAGAAGTTAGTTATCACTGAAGTGTGTGATGCTTCCTGCCCT---GCGATTGGTAGATTTCTATTTGGTTCAGGGATTGGGTAACTTTTCAAGACCTTTCTGGTTTGTCAGTAACTTTTTT-CCAGAGAAGCAGAAATAACAAGGTCTGCTT-CCTTTGCTTGCTTTGTGGAAATGataataacatcatcatcaaaca--t i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29328789 305 + 50890351 TAAAATTATTCTCTG---------------------------------------------------------------------------------------TATTCACAAATCATAGCTATCAGTCTTTAGTCAGATGGGAAAAC----T-TAATTAA-TTCAGGGATTAAATTTCTCTTTATAGC-TGCATGGTCCA-TGT-AAGTAGAAGTTAGTTATCACTGAAATGTGTGATGCTTCCTGCCCT---GCGATTGGTAGATTTCTGTTTGGTTCAGGGATTGGGTAACTTTTCAAGACCTTTCTGGTTTGTCAGTAACTTTTTT-CCAGAGAAGCAGAAATAACAAGGTCTGCTT-CCTTTGCTTGCTTTGTGGAAATGataataacatcatcatcaaaca--c i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 961371 305 - 2385121 TAAAATTATTCTCTG---------------------------------------------------------------------------------------TATTCACAAATCATAGCTATCAGTCTTTAGTCAGATGGGAAAAC----T-TAATTAA-TTCAGGGATTAAATTTCTCTTTATAGC-TGCATGGTCCA-TGT-AAGTAGAAGTTAGTTATCACTGAAGTGTGTGATGCTTCCTGCCCT---GCGATTGGTAGATTTCTATTTGGTTCAGGGATTGGGTAACTTTTCAAGACCTTTCTGGTTTGTCAGTAACTTTTTT-CCAGAGAAGCAGAAATAACAAGGTCTGCTT-CCTTTGCTTGCTTTGTGGAAATGataataacatcatcatcaaaca--t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2403182 305 + 4274983 TAAAATTATTCTCTG---------------------------------------------------------------------------------------TATTCAAAAATCGTAGCTATCAGTGTTTAGTCAGATGGGAAAAC----T-TAATTAA-TTCAGGGGTTAAATTTCTCTTTATAGC-TGCATGGTGCA-TGT-AAGTAGAAGTTAGTTATCACTGAAGTGTGTGATGCTTCCTGCCCT---GTGATTGGTAGATTTCTATTTGGTTCAGGGATTGGGTAACTTTTCAAGACCTTTCTTGTTTGTCAGTAACTTTTTT-CCAGAGAAGCAGAAATAACAAGGTCTGCTT-CCTTTGCTTGCTTTGTGGAAATGataataacatcatcatcaaaca--t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28614815 297 + 49145316 TAAAATTATTCTCTG---------------------------------------------------------------------------------------TATTCACAAATCATG----TCAGTTTTTAGTCAGATGGGAAAAC----T-TAATTAA-TTCAGGGATTACATTTCTCTTTGTAGC-TGCTTAGTTCA-TGT-AAGCACAAGTTAGTTATCACTGAAGTGTGTGATGCTTCCTGTCCT---GGGATTGGTAGACTTGTATTTGATTCAGGGATTGGGTAACTTTTCAAGACCTTTC----TTGTCAGTAACTTTTTT-CCAAACAAGCAAAAATAACAAGGACTGCTTTTTTTTTCTTGCTTTGCAGGAATGATAATAACATCATCATCAAACA--- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5468105 301 + 8899380 TAAAATTATTCTCTG---------------------------------------------------------------------------------------TATTCACAAATCATGGCTATCAATTTTTAGTCAGATGGAAAAAC----T-TAATTAA-TTCAGGGATTACATTTCTCTTTGTAGC-TGCTTAGTCCA-TGT-AAGCACAAGTTAGTTATCACTGAAGTGTGTGATGCTTCCTGTCCT---GGGATTGGTAGATTTCTGTTTGATTCAGGTATTGGGTAACTTTTCAAGACCTTTC----TTGTCAGTAACTTTTTT-CCAGACAAGCAGAAATAACAAGGCCTGCTTATTTTTTCTTGCTTTGCAGGAACGATAATAACATCATCATCAAGCA--- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1672130 302 - 2680843 TGAAATTATTCTCTG---------------------------------------------------------------------------------------TATTCACAAATCATGGCTATCAATTTTTAGTCAGATGGGAAAAC----T-TAATTAA-TTCAGGGATTACATTTCTCTTTGTAAC-TGCTTAGACCA-TGT-AAGCACAGGTTAGTTATCACTGAAGTGTGTGATGCTTCCTGTCCT---GGGATTGGTAGATTTCTATTTGATTCAGGGATTGGGTAACTTTTCAAGACCTTTC----TTGTCAGTAACTTTTTT-CCAGGCAAGCAGAAATAACAAGGCCTGCTTATTTTTTCTTGCTTTGCAGGAATGataatagcatcatcatcaaacat-- i cebCap1.NW_016107633v1 C 0 I 994 s aotNan1.NW_018505377v1 418614 301 - 4471408 TAAAATTATTCTCTG---------------------------------------------------------------------------------------TATTCACAAATCATGGCTGTCAATTTTTAGTCAGATGGGAAAAC----T-TAATTAA-TTCAGGGATTAC-TTTCTCTTTGTAGC-TGCTTAGTCCA-TGT-AAGCCCAAGTTAGTTATCACTGAAGTGTGTGATGCTTCCTGTCCT---GGGATTGGTAGATTTCTATTTGATTCAGGGATTGGGTAACTTTTCAAGACCTTTC----TTGTCAGTAACTTTTTT-CCAGACAAGCAGAAATAACAAGGCCTGCTTATTTTTTCTTGCTTTGCAGGAATGATAATAACATCATCATCAAACA-T- i aotNan1.NW_018505377v1 C 0 I 997 s micMur3.chr22 4002820 303 - 30143674 TACAATTGTTGTCTG---------------------------------------------------------------------------------------TATTCACAAATCCTAGCTGTCAATCTTTAGTCAAATAGGAAAAT----TTTAGTTAA-TTCAGGGATTAAATTTCTCCTTGTAGC-TACTAGGTCCA-TTTTAAGAAGAAGTTAGACATCACTGAAGCACTTGATGCTTCCTACCCT---GGGATAGATAGGTTTGTGTTGGGTTCAGGGGTTGCCTAACTTTACAGCATCTTTCTTCTTTCTC--TAACTTTTTT-CCAGACAAACAGAAATAACAAGGCCTGTTTACTTTTGCTTGTTTTGTGGGGATGatgat---aacaacatcaagca--t i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 618264 307 + 2501019 TACAATTGTTGTCTG---------------------------------------------------------------------------------------TATTCACAGATCATAGCTATCAGTCTGTAGTCAAATAGGAACAT----TTTAATTAA-TTCAGGGATTAAATTTCTCCTGGTAGCTTACTTAGTCCA-TTTGAAGTAGAAGTTAGACATCACTGAAGCGTGTGATGCTTCCTGCCCT---GGGATGGGTAGATTTCTGTTGGGTTCAAGGGTTGGGTAACTTTACAAGACCTTTCTTTTTTCTC--TAACTTTTTT-CCAGACAAACAGAAATAACAAGGCCTGTTTACTTTTGCTTGTTTTGTGGGAATGATaataaaaacatcatcaagca--t i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5537791 291 + 5549422 TAAAATTATTCTTTG---------------------------------------------------------------------------------------ATTTCACAAATCACAGCTATCAATCTTTAGTCAAATAAAAAAAT----T----TCAA-TTCAGGGATTAAATTTTTCTTTGTATC-ATCTTAGTTCC-TTTTAAGTAGAAGTCAGATATCACTGAAGCACCTGATGCTTCCCACCTT---GGGATAGGCAGATTTCTATTTAGTACAGGGATTGAGTAAGTTTACAAGGCCTTTCTTGTTTGTCAGTAACTTTTTT-CTAG-------------ACAAGGTATGTTTACTTTTGCTTGTTGCGTGGAAATGATAATATTAACTTCATCAaaca--t i otoGar3.GL873654 I 607 C 0 s mm10.chr7 111150289 359 - 145441459 GATAATTGTTTTCTGGCTGAGGCTAAGGAGCATTTCCCTACCATGGTGAGGTCCTAGATTTGATCCCTAGCAGCATGCACACATGCACACACAAACACACTATATTTACAAATCATAGCAATCACATTTTAGTCAAACAGGAACTC-TAAT-GAATTCA-TTCAGGAGTT-CATTTCTCTT-------TGCTTAATGCA-TTG-AAGTAAACACTAGGGTTCA-TGAAGTATGTGTTTCCTCCCTTCCTAGGGAGGTAGGTAGGTTTCTGTTTGGTTTAGGCATTAGGTAACTCAACAAAACCTTTGTTGTTTATCAGTAGTGTTTTT-CCAGACAAGCAAAGATAATGAGGCCTGCAT-TCT---CTTGTCTTATGT------------------------------ i mm10.chr7 C 0 C 0 s canFam3.chr1 4663096 213 - 122678785 TAAAATTGTTCTCTG---------------------------------------------------------------------------------------TGTTCACAAATCATAGC-------------------------------T-------A-T------------------------------------CA-CAT------------------CACTGAAACAAGTGATGCCTCCTA-CCT---AGAATACATAGATTTCTACTCAGTTCAGGAATTGGCTGACTCTGCAGGACCT-------GTGCCTATACTTTTTTT-CCAGACAAGCAGAGCTAACAAGGCTTGCTTACTTTCACTTACTGTGTGGGAATGATAATAACAAGATCATCAaaca--t i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 400523 277 + 643850 TAAATTTTTTTTCTG-----------------------------------------------------------------------------------------TTCACAAATCAAAGCTGTCAATATTTAGCGAAATGGAAAAGT----T-TAATGAA-TTCAAGGATAAAATTTCTCATTGTATC-CGCTTGGTCCC-TTT-AAGTAGGAGCTAGGCATCACTAAATCATGTGATACCTC----CCT--------------------ACTTAGTTCAGGAATTCGGTGACTTTGCAAGACCTTTC----TTGTCAATAACTCTTCC-AGGGACAAGCAGAGAAAACAAGTTCTGCTTATTTCTGCTTGTTTTGTAAGAATGataataacattatcactttat---- i dasNov3.JH563638 C 0 C 0 a score=358025.000000 s hg38.chr19_GL383574v1_alt 138398 30 + 155864 ttagtgcttaatatgtgccagacatcattc s panTro5.chr19 36205718 30 + 61309027 ttagtgcttaatatgtgccagacatcattc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39949928 30 + 64411610 ttagtgcttaatatgtgccagacatcattc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6361611 30 - 8369475 ttagtgcttaatatgtgccagacatcattc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63958660 30 - 106955855 ttagtgcttaatatgtgccagacatcattc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30274805 30 + 53671032 ttagttcttaatatgtgccagacatcattc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729078 30 + 59248254 ttagttcttaatatgtgccagacatcattc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4602855 30 - 13342542 ttagttcttaatatgtgccagacatcattc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5525973 30 + 7714307 ttagttcttaatatgtgccagacatcattc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329094 30 + 50890351 ttagttcttaatatgtgccagacatcattc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 961676 30 - 2385121 ttagttcttaatatgtgccagacatcattc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2403487 30 + 4274983 ttagttcttaatatgtgccagacatcattc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28615112 22 + 49145316 --------TAATACGTGACAGACATCATTC i calJac3.chr22 C 0 I 1144 s saiBol1.JH378197 5468406 22 + 8899380 --------TAATACATGACAGACATCATTC i saiBol1.JH378197 C 0 I 945 s micMur3.chr22 4003123 30 - 30143674 ttagtacctaatatatgccagatattattc i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 618571 30 + 2501019 ttagtgcttaataaatgccagatattattc i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5538082 30 + 5549422 ttagtgcttaatatatgccagatattatta i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111150648 10 - 145441459 --------------------GACATTATTC i mm10.chr7 C 0 C 0 s canFam3.chr1 4663309 30 - 122678785 tcactgctcagtatgtggcagatattattc i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 400800 28 + 643850 atagtgcttaatatgtgtc--atattattc i dasNov3.JH563638 C 0 C 0 e aotNan1.NW_018505377v1 418915 997 - 4471408 I e cebCap1.NW_016107633v1 1672432 994 - 2680843 I a score=402489.000000 s hg38.chr19_GL383574v1_alt 138428 42 + 155864 taagtgctttatatgtataaacccatttaactcaataacagt s panTro5.chr19 36205748 42 + 61309027 taagtgctttatatgtataaacccatttaactcaataacagt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39949958 42 + 64411610 taagtgctttatatgtataaacccatttaactcaataacagt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6361641 42 - 8369475 taagtgctttatatgtataaacccatttaactcaataacagt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63958690 42 - 106955855 taagtgctttagatgtataaacccatttaagtcaataacagt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30274835 42 + 53671032 taagtgttttatatgtaaaaatccttttaacttagtaacagt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729108 42 + 59248254 taagtgttttatatgtaaaaatccttttaacttagtaacagt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4602885 42 - 13342542 taagtgttttatatgtaaaaatccttttaacttagtaacagt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526003 42 + 7714307 taagtgttttatatgtaaaaatccttttaacttagtaacagt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329124 42 + 50890351 taagtgttttatatgtagaaatccttttaacttagtaacagt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 961706 42 - 2385121 taagtgttttatatgtaaaaatccttttaacttagtaacagt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2403517 36 + 4274983 taagtgttttatatgtagaaatccttttaactt------agt i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 4003153 42 - 30143674 taagtgctttatgtgaatgaacgcatttaactcaataacagt i micMur3.chr22 C 0 I 240 s proCoq1.NW_012149263v1 618601 42 + 2501019 taaatgctttatgtgtatgaactcatttaactcaataacaGT i proCoq1.NW_012149263v1 C 0 I 246 s otoGar3.GL873654 5538112 38 + 5549422 taagtgctttatttgaat----tcatttccctcaataacaGT i otoGar3.GL873654 C 0 I 8 s mm10.chr7 111150658 40 - 145441459 --TTTTTtttatatgtatgggctcatttaactcagtaacagt i mm10.chr7 C 0 C 0 s canFam3.chr1 4663339 42 - 122678785 tacctactttatgtgtataaactcaatgaactcaataacagt i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 400828 42 + 643850 taagtgctttatttttataaattcatttaactcaataacagt i dasNov3.JH563638 C 0 C 0 e aotNan1.NW_018505377v1 418915 997 - 4471408 I e cebCap1.NW_016107633v1 1672432 994 - 2680843 I e saiBol1.JH378197 5468428 945 + 8899380 I e calJac3.chr22 28615134 1144 + 49145316 I a score=1044374.000000 s hg38.chr19_GL383574v1_alt 138470 146 + 155864 ggt---------------------------------------------------------------tac---tattat--ccttattttatagatgatgagac--aggcagagagaggttaaggaacttgctcaaggtca---agctgatcc-tgac--agccaagatctcaccctattagtcaga-cgcccagggccattctcttcttcactTCAATCGTCT s panTro5.chr19 36205790 146 + 61309027 ggt---------------------------------------------------------------tac---tattat--ccttattttatagacgatgagac--aggcagagagaggttaaggaacttgctcaaggtca---agctgatcc-tgac--agccaagatctcaccctattagtcaga-cgcccagggccattctcttcttcactTCAATCGTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950000 146 + 64411610 ggt---------------------------------------------------------------tac---tattat--ccttattttatagacgatgagac--aggcagagagaggttaaggaacttgctcaaggtca---agctgatcc-tgac--agccaagatctcaccctattagtcaga-tgcccagggccattctcttcttcactTCAATCGTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6361683 146 - 8369475 ggt---------------------------------------------------------------tac---tattat--ccttattttatagacgatgagac--aggcagagagaggttaaggaacttgctcaaggtca---agctgatcc-tgac--agccaagatctcaccctattagtcaga-cgcccagggccattctcttcttcactTCAATCGTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63958732 146 - 106955855 ggt---------------------------------------------------------------tac---tattat--ccttattttacagacgatgagac--aggcagagagaggttaaggagctttctcaaggtca---agctgatcc-tgac--agccaagatctcaccctattagtcagg-cgcccagggccattctcttcttcactTCAATAGTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30274877 147 + 53671032 ggt---------------------------------------------------------------tac---tataat--ccttattttacagatgatgaaac--aggcagagagagattaaggaacttgctcaaggtga---agttgatcc-tgacagagccaagatctcacccagttagtcagg-tgcccaaggccattatcttcttcacttcaatactc- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729150 147 + 59248254 ggt---------------------------------------------------------------tac---tataat--ccttattttacagatgatgaaac--aggcagagagagattaaggaacttgctcaaggtga---agttgatcc-tgacagagccaagatctcacccagttagtcagg-tgcccaaggccattatcttcttcacttcaatactc- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4602927 147 - 13342542 ggt---------------------------------------------------------------tac---tataat--ccttattttacagatgatgaaac--aggcagagagagattaaggaacttgctcaaggtga---agttgatcc-tgacagagccaagatctcacccagttagtcagg-tgcccaaggccattatcttcttcacttcaatactc- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526045 147 + 7714307 ggt---------------------------------------------------------------tac---tataat--ccttattttacagatgatgaaac--aggcagagagagattaaggaacttgctcaaggtca---agttgatcc-tgacagagccaagatctcacccagttagtcagg-tgcccaaggccattatcttcttcactTCAATACTC- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329166 147 + 50890351 ggt---------------------------------------------------------------tac---tataat--ccttattttacagatgatgaaac--aggcagagagaggttaaggaacttgctcaaggtca---agttgatcc-tgacagagccaagatctcacccagttagtcagg-tgcccaaggccattatcttcttcacttcaatattc- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 961748 147 - 2385121 ggt---------------------------------------------------------------tac---tataat--ccttattttacagatgatgaaac--aggcagagagagattaaggaacttgctcaaggtca---agttgatcc-tgacagagccaagatctcacccagttagtcagg-tgcccaaggccattatcttcttcacttcaatactc- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2403553 147 + 4274983 ggt---------------------------------------------------------------aac---tataat--ccttattttacagataatgaaac--aggcagagagaggttaaggaacttgctgaaggtca---agttgatcc-tgacagagccaagacctcacccagttagtcagg-tgcccaaggtcattctcttcttcacttcagtactc- i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5538158 206 + 5549422 GGTTTTCTTTGTTATGTTTTGTTTTAAAAAGTTTTGTTTCTGCTAGACTATATGGgaagtaattactgt---tattat--ccctattttacagacaatgaaactgaggcagagagaggttaaggaacttgctcaaggtcacgtagctggtaagtggcagagccaag-----------ttaggcaggctccccaagaccactcttgtattcgctttggtactc- i otoGar3.GL873654 I 8 C 0 s mm10.chr7 111150698 145 - 145441459 agt---------------------------------------------------------------tac---tcttattatctctgcttatagatgatgacac--ctctgcagagaggataaagaacttactcaaggtcacattactggtca-gtgcagaaccaggacctcacccagccagtcaga-cctgcaaggccactctcttagtgactTC-------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4663381 149 - 122678785 agt---------------------------------------------------------------tactgttattat--ccctattttacagacaatgaaactgaggcacagagaggttaaagaacttgcccaaggtcacgtagctggtaagtgacagagccaggatcctacccagttagtc-gg-ccctcaaggtcactctcttatccactgta------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 400870 151 + 643850 agt---------------------------------------------------------------tgctgttattat--ccctattttacagatgatgaaactgaggcacagagaggttaaagaacttgcccaaggtcacatagctggtaagtggcagagccaggattgcacccagtcacttggc-cccccaaggctgtt-ttttatgccctgcact----- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 618643 246 + 2501019 I e micMur3.chr22 4003195 240 - 30143674 I e aotNan1.NW_018505377v1 418915 997 - 4471408 I e cebCap1.NW_016107633v1 1672432 994 - 2680843 I e saiBol1.JH378197 5468428 945 + 8899380 I e calJac3.chr22 28615134 1144 + 49145316 I a score=4522.000000 s hg38.chr19_GL383574v1_alt 138616 2 + 155864 -TA s panTro5.chr19 36205936 2 + 61309027 -TA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950146 2 + 64411610 -TA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6361829 2 - 8369475 -TA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63958878 2 - 106955855 -TA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275024 2 + 53671032 -tg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729297 2 + 59248254 -tg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603074 2 - 13342542 -tg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526192 2 + 7714307 -TG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329313 2 + 50890351 -tg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 961895 2 - 2385121 -tg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2403700 2 + 4274983 -tg i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28616278 2 + 49145316 -TG i calJac3.chr22 I 1144 C 0 s otoGar3.GL873654 5538364 2 + 5549422 -tg i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 401021 2 + 643850 cc- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 618643 246 + 2501019 I e micMur3.chr22 4003195 240 - 30143674 I e mm10.chr7 111150843 0 - 145441459 C e canFam3.chr1 4663530 0 - 122678785 C e aotNan1.NW_018505377v1 418915 997 - 4471408 I e cebCap1.NW_016107633v1 1672432 994 - 2680843 I e saiBol1.JH378197 5468428 945 + 8899380 I a score=24746.000000 s hg38.chr19_GL383574v1_alt 138618 4 + 155864 --TCTT s panTro5.chr19 36205938 4 + 61309027 --TCTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950148 4 + 64411610 --TCTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6361831 4 - 8369475 --TCTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63958880 4 - 106955855 --TCTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275026 4 + 53671032 --tctt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729299 4 + 59248254 --tctt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603076 4 - 13342542 --tctt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526194 4 + 7714307 --TCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329315 4 + 50890351 --tCTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 961897 4 - 2385121 --tctt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2403702 4 + 4274983 --tctt i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28616280 4 + 49145316 --TCTT i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 419912 4 - 4471408 --TCTT i aotNan1.NW_018505377v1 I 997 C 0 s otoGar3.GL873654 5538366 4 + 5549422 --CCTC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4663530 3 - 122678785 ---ctC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 401023 4 + 643850 tgcc-- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 618643 246 + 2501019 I e micMur3.chr22 4003195 240 - 30143674 I e mm10.chr7 111150843 0 - 145441459 C e cebCap1.NW_016107633v1 1672432 994 - 2680843 I e saiBol1.JH378197 5468428 945 + 8899380 I a score=14972.000000 s hg38.chr19_GL383574v1_alt 138622 1 + 155864 T s panTro5.chr19 36205942 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950152 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6361835 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63958884 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275030 1 + 53671032 t i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729303 1 + 59248254 t i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603080 1 - 13342542 t i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526198 1 + 7714307 T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329319 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 961901 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2403706 1 + 4274983 t i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28616284 1 + 49145316 T i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 419916 1 - 4471408 T i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4003435 1 - 30143674 t i micMur3.chr22 I 240 C 0 s proCoq1.NW_012149263v1 618889 1 + 2501019 t i proCoq1.NW_012149263v1 I 246 C 0 s otoGar3.GL873654 5538370 1 + 5549422 T i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111150843 1 - 145441459 C i mm10.chr7 C 0 C 0 s canFam3.chr1 4663533 1 - 122678785 T i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 401027 1 + 643850 t i dasNov3.JH563638 C 0 C 0 e cebCap1.NW_016107633v1 1672432 994 - 2680843 I e saiBol1.JH378197 5468428 945 + 8899380 I a score=1444141.000000 s hg38.chr19_GL383574v1_alt 138623 97 + 155864 CTAAAGGGAA--GTGCTTCAAGAGATTTTCTTAGGATGGCT-GACCACTTTTCATGTCTTGTCAACCATAGGTATAAG---AAAATCCTCTAATACTGAGTCT s panTro5.chr19 36205943 97 + 61309027 CTAAAGGGAA--GTGCTTCAAGAGATTTTCTTAGGATGGCT-GACCACTTTTCATGTCTTGTCAACCATAGGTATAAG---AAAATCCTCTAATACTGAGTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950153 97 + 64411610 CTAAAGGGAA--GTGCTTCAAGAGATTTTCTTAGGATGGCT-GACCACTTTTCATGTCTTGTCAACCATAGGTATAAG---AAAATCCTCTAATACTGAGTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6361836 97 - 8369475 CTAAAGGGAA--GTGCTTCAAGAGATTTTCTTAGGATGGCT-GACCACTTTTCATGTCTTGTCAACCATAGGTATAAG---AAAATCCTCTAATACTGAGTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63958885 97 - 106955855 CTAAAGGGAA--GTGCTTCGAGAGATTTTCTCAGGATGGCT-GACCACTTTTCATGTCTTGTCAACCATAGGTACAAG---AAAATCCTCTAATACTGAGTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275031 96 + 53671032 ctaAAGGGAA--GTGCTTCAAGAGATTTTATCAGGATGGCT-GACCACTTTTCATGTCTTGTCAACCATAGGTATAAG---AAAAT-CTCTAATACTGAGTCT i rheMac8.chr19 C 0 I 6 s macFas5.chr19 34729304 96 + 59248254 ctaAAGGGAA--GTGCTTCAAGAGATTTTATCAGGATGGCT-GACCACTTTTCATGTCTTGTCAACCATAGGTATAAG---AAAAT-CTCTAATACTGAGTCT i macFas5.chr19 C 0 I 6 s macNem1.NW_012011689v1 4603081 96 - 13342542 ctaAAGGGAA--GTGCTTCAAGAGATTTTATCAGGATGGCT-GACCACTTTTCATGTCTTGTCAACCATAGGTATAAG---AAAAT-CTCTAATACTGAGTCT i macNem1.NW_012011689v1 C 0 I 6 s cerAty1.NW_012005268v1 5526199 96 + 7714307 ATAAAGGGAA--GTGCTTCAAGAGATTTTATCAGGATGGCT-GACCACTTTTCATGTCTTGTCAACCATAGGTATAAG---AAAAT-CTCTAATACTGAGTCT i cerAty1.NW_012005268v1 C 0 I 6 s chlSab2.chr6 29329320 96 + 50890351 CTAAAGGGAA--GTGCTTCAAGAGATTTTATCAGGATGGCT-GACCACTTTTCATGTCTTGTCAACCATAGGTATAAG---AAAAT-CTCTAATACTGAGTCT i chlSab2.chr6 C 0 I 6 s manLeu1.NW_012102454v1 961902 96 - 2385121 ctaAAGGGAA--GTGCTTCAAGAGATTTTATCAGGATGGCT-GACCACTTTTCATGTCTTGTCAACCATAGGTATAAG---AAAAT-CTCTAATACTGAGTCT i manLeu1.NW_012102454v1 C 0 I 6 s colAng1.NW_012111697v1 2403707 96 + 4274983 ctaAAGGGAA--GTGCTTCAAGAGATTTTATCAGGATGGCT-GACCACTTTTCATGTCTTGTCAACCATAGGTATAAG---AAAAT-CTCTAATACTGAGTCT i colAng1.NW_012111697v1 C 0 M 1642 s calJac3.chr22 28616285 100 + 49145316 CTAAAGGGAA--GTGCTTCAAGAGATTTTCTCAGGATAACT-GACCACTTTTCATGTCTTGTTAATTATAGGTATAAGAAGAAAATCCTCTTATAATGAGTCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5469373 100 + 8899380 CTAAAGGGAA--GTGCTTCAAGAGATTTTCTCAGGATAACA-GACCACTTTTCATGTCTTGTTAATTACAGGTATAAGAAAAAAATCTTCTTATAACGAGTCT i saiBol1.JH378197 I 945 C 0 s cebCap1.NW_016107633v1 1673426 100 - 2680843 CTAAAGGGAA--GTGCTTCAAGAGATTTTCTCAGGATAACT-GACCACTTTTCATGTCTTGTTAATTATAGGTATAAGAAGAAAATCCTCTTATAATGAGTCT i cebCap1.NW_016107633v1 I 994 C 0 s aotNan1.NW_018505377v1 419917 100 - 4471408 CTAAAGGGAA--GTGCTTCAAGAGATTTTCTCAGGATAACT-GACCACTTTTCATGTCTTGTTAATTATAGGTATAAGAAGAAAATCCTCTTATAATGAGTCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4003436 97 - 30143674 ctgAAGGGAA--GTGCTTCAGGAGATTTTCCCAGGACGACT-GACCACTTTTCGTATCTTGCCAATTATGGGTATAAG---AAAACCCTCTTATACTAAATCT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 618890 97 + 2501019 ctAAAGGGAA--GTGCTTCAGGAGATTTTCCCAGGGTGACT-GACCACTTTTCATATCTTACCAATTATGGGTATAAG---AAAACCCTCTTACACTGAATCT i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5538371 97 + 5549422 CTAAAGGGAA--GAGCTTCAGGAGGTTTTCCCAGGATGACT-GACTGCTTTTCATTTCTTACCAATTATGGGTATAAG---AAAACCCTCTTATACTGAAACT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111150844 83 - 145441459 CTAGAGGGAAGTGTGCTTCCCACCACTTTCCTAG-----------CACTTTGAATTTTCT-----TCCTGGGGGCCCA---AGGTTGCTTTTACACTGGTTT- i mm10.chr7 C 0 C 0 s canFam3.chr1 4663534 95 - 122678785 GTAAAGGGAA--GCTCTTT---AGATATTCTTAGGCTGACCAAACCACTTTTTATATCTTGTCAGCTAGGAATATAAG---AAAACCCTTTTATACTTAATCT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 401028 91 + 643850 ctAAAGGGAA--GCACTTTAGGAGATTTTTTCAGA-----T-GGCCCCTTTTCTTATCTTACCAATTATGGGGATAAG---AAAAT-CTTTTATACTTAACCT i dasNov3.JH563638 C 0 C 0 a score=16670.000000 s hg38.chr19_GL383574v1_alt 138720 1 + 155864 T s panTro5.chr19 36206040 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950250 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6361933 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63958982 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275133 1 + 53671032 T i rheMac8.chr19 I 6 C 0 s macFas5.chr19 34729406 1 + 59248254 T i macFas5.chr19 I 6 C 0 s macNem1.NW_012011689v1 4603183 1 - 13342542 T i macNem1.NW_012011689v1 I 6 C 0 s cerAty1.NW_012005268v1 5526301 1 + 7714307 T i cerAty1.NW_012005268v1 I 6 C 0 s chlSab2.chr6 29329422 1 + 50890351 T i chlSab2.chr6 I 6 C 0 s manLeu1.NW_012102454v1 962004 1 - 2385121 T i manLeu1.NW_012102454v1 I 6 C 0 s calJac3.chr22 28616385 1 + 49145316 T i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5469473 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1673526 1 - 2680843 T i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 420017 1 - 4471408 T i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4003533 1 - 30143674 T i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 618987 1 + 2501019 T i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5538468 1 + 5549422 T i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111150927 1 - 145441459 C i mm10.chr7 C 0 C 0 s canFam3.chr1 4663629 1 - 122678785 T i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 401119 1 + 643850 T i dasNov3.JH563638 C 0 C 0 e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=51178.000000 s hg38.chr19_GL383574v1_alt 138721 4 + 155864 CATC s panTro5.chr19 36206041 4 + 61309027 CATC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950251 4 + 64411610 CATC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6361934 4 - 8369475 CATC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63958983 4 - 106955855 CATC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275134 4 + 53671032 CATC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729407 4 + 59248254 CATC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603184 4 - 13342542 CATC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526302 4 + 7714307 CATC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329423 4 + 50890351 CATC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962005 4 - 2385121 CATC i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28616386 4 + 49145316 TATC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5469474 4 + 8899380 TATC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1673527 4 - 2680843 TATC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 420018 4 - 4471408 TATC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4003534 4 - 30143674 GATC i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 618988 4 + 2501019 GATC i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5538469 4 + 5549422 CATT i otoGar3.GL873654 C 0 C 0 s mm10.chr7 111150928 4 - 145441459 CATC i mm10.chr7 C 0 C 0 s canFam3.chr1 4663630 4 - 122678785 TGTC i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 401120 0 + 643850 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=70140.000000 s hg38.chr19_GL383574v1_alt 138725 6 + 155864 TAG--------TTT s panTro5.chr19 36206045 6 + 61309027 TAG--------TTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950255 6 + 64411610 TAG--------ttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6361938 6 - 8369475 TAG--------ttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63958987 6 - 106955855 TAG--------ttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275138 6 + 53671032 TAG--------ttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729411 6 + 59248254 TAG--------ttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603188 6 - 13342542 TAG--------Ttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526306 6 + 7714307 TAG--------ttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329427 14 + 50890351 TAGTTTCTTTCTtt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962009 6 - 2385121 TAG--------Ttt i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28616390 6 + 49145316 TAG--------ttt i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5469478 6 + 8899380 TAG--------ttt i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1673531 6 - 2680843 TAG--------TTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 420022 6 - 4471408 TAG--------ttt i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4003538 6 - 30143674 TGG--------TTT i micMur3.chr22 C 0 I 3 s proCoq1.NW_012149263v1 618992 6 + 2501019 TGG--------TTT i proCoq1.NW_012149263v1 C 0 I 3 s mm10.chr7 111150932 6 - 145441459 TAG--------TTT i mm10.chr7 C 0 C 0 e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e canFam3.chr1 4663634 0 - 122678785 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=122747.000000 s hg38.chr19_GL383574v1_alt 138731 20 + 155864 ----CTttctttctttcttttttt s panTro5.chr19 36206051 20 + 61309027 ----Ctttctttctttctttcttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950261 20 + 64411610 ----ctttctttctttctttcttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6361944 20 - 8369475 ----ctttctttcttttttttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63958993 20 - 106955855 ----ctttgtttttttttttgttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275144 20 + 53671032 ----ctttctttctttcttttttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729417 20 + 59248254 ----ctttctttctttcttttttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603194 20 - 13342542 ----ctttctttcttttttttttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526312 20 + 7714307 ----ctttctttcttttttttttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329441 20 + 50890351 ----ctttctttcttttctttttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962015 20 - 2385121 ----ctttctttcttttttttttt i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28616396 18 + 49145316 ----cttttttttttttttttt-- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5469484 17 + 8899380 ----c-cttttttttttttttt-- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1673537 20 - 2680843 ----CCCttttttttttttttttt i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 420028 20 - 4471408 ----cctttttttttcttcttttt i aotNan1.NW_018505377v1 C 0 C 0 s mm10.chr7 111150938 20 - 145441459 CAAGAATGTTTTCTGTTGTT---- i mm10.chr7 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e canFam3.chr1 4663634 0 - 122678785 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=4734.000000 s hg38.chr19_GL383574v1_alt 138751 12 + 155864 tttttttttttt s panTro5.chr19 36206071 10 + 61309027 tttttttttt-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950281 12 + 64411610 cttttttttttt i panPan2.chr19 C 0 I 5 s gorGor5.CYUI01015150v1 6361964 7 - 8369475 tcttttt----- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959013 6 - 106955855 ttgttt------ i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275164 8 + 53671032 tttttttt---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729437 8 + 59248254 tttttttt---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603214 8 - 13342542 tttttttt---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526332 4 + 7714307 tttt-------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329461 8 + 50890351 tttttttt---- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962035 8 - 2385121 tttttttt---- i manLeu1.NW_012102454v1 C 0 C 0 s cebCap1.NW_016107633v1 1673557 12 - 2680843 tttttttttttt i cebCap1.NW_016107633v1 C 0 M 340 s aotNan1.NW_018505377v1 420048 1 - 4471408 t----------- i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e mm10.chr7 111150958 0 - 145441459 C e canFam3.chr1 4663634 0 - 122678785 C e saiBol1.JH378197 5469501 0 + 8899380 C e calJac3.chr22 28616414 0 + 49145316 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=160721.000000 s hg38.chr19_GL383574v1_alt 138763 25 + 155864 gagacggagtctcactc-tgtcaccc s panTro5.chr19 36206081 25 + 61309027 gagatggagtctcactc-tgtcgccc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950298 25 + 64411610 tagacggagtctcactc-tgtcgccc i panPan2.chr19 I 5 I 20 s gorGor5.CYUI01015150v1 6361971 25 - 8369475 gagacggagtctcactc-tgtcgccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959019 25 - 106955855 gagacggagtctcactc-tgtcgccc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275172 24 + 53671032 -agacggagtctcgctc-tgtcgccc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729445 24 + 59248254 -agacggagtctcgctc-tgtcgccc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603222 23 - 13342542 gagac--agtctcgctc-tgtcgccc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526336 22 + 7714307 ---acggagtctcgctc-tgtcgccc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329469 25 + 50890351 gagacggagtctcactc-tgtcgccc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962043 25 - 2385121 tagacggagtctcgctc-tgtcgccc i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28616414 25 + 49145316 aagactgagtctcactc-agtcaccc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5469501 26 + 8899380 gagatggaatttcgctcttgtttccc i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 420049 25 - 4471408 aagaccgagtctcactc-agtcaccc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e mm10.chr7 111150958 0 - 145441459 C e canFam3.chr1 4663634 0 - 122678785 C e cebCap1.NW_016107633v1 1673569 340 - 2680843 M e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=264444.000000 s hg38.chr19_GL383574v1_alt 138788 43 + 155864 aggctggagtgcagtggcatgatctcggctcactgcaagctcc s panTro5.chr19 36206106 43 + 61309027 aggctggagtgcagtggcgtgatctcggctcactgcaagctcc i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6361996 43 - 8369475 aggctgaagtgcagtggcgcgatctcggctcactgcaagctcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959044 43 - 106955855 aggctggagtgcagtggcgcgatctcggctcactgcaagctcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275196 43 + 53671032 aggttggagtgcagtggtgggatctcggctcactgcaagctct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729469 43 + 59248254 aggttggagtgcagtggtgggatctcggctcactgcaagctct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603245 43 - 13342542 aggttggagtgcagtggtgggatctcggctcactgcaagctct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526358 43 + 7714307 aggttggagtgcagtggcgggatctcggctcactgcaagctct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329494 43 + 50890351 aggttggagtgcagtggcgggatctcggctcactgcaagctcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962068 43 - 2385121 aggttggagtgcagtggcacaatctcggcttactgcaacctcc i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28616439 43 + 49145316 agacaggagtgcagtggcgcaatctcagcacactgcagcctcc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5469527 43 + 8899380 aggctggagtgcaatggcgcgatctcggctcaccgcaaactcc i saiBol1.JH378197 C 0 M 906 s aotNan1.NW_018505377v1 420074 43 - 4471408 aggcaggagtgcagtggcgcagtctcagctcactgcaacctcc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e mm10.chr7 111150958 0 - 145441459 C e canFam3.chr1 4663634 0 - 122678785 C e cebCap1.NW_016107633v1 1673569 340 - 2680843 M e colAng1.NW_012111697v1 2403803 1642 + 4274983 M e panPan2.chr19 39950323 20 + 64411610 I a score=67738.000000 s hg38.chr19_GL383574v1_alt 138831 12 + 155864 gcctcccaggtt s panTro5.chr19 36206149 12 + 61309027 gcctcccaggtt i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362039 12 - 8369475 gcctcccaggtt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959087 12 - 106955855 gcctcccaggtt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275239 12 + 53671032 gcctcccgggtt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729512 12 + 59248254 gcctcccgggtt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603288 12 - 13342542 gcctcccgggtt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526401 12 + 7714307 gcctcccgggtt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329537 12 + 50890351 gcctcccgggtt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962111 12 - 2385121 acctcccaggtt i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28616482 12 + 49145316 acctcctgggtt i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 420117 12 - 4471408 acctcccgggtt i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e mm10.chr7 111150958 0 - 145441459 C e canFam3.chr1 4663634 0 - 122678785 C e cebCap1.NW_016107633v1 1673569 340 - 2680843 M e saiBol1.JH378197 5469570 906 + 8899380 M e colAng1.NW_012111697v1 2403803 1642 + 4274983 M e panPan2.chr19 39950323 20 + 64411610 I a score=4190.000000 s hg38.chr19_GL383574v1_alt 138843 1 + 155864 c s panTro5.chr19 36206161 1 + 61309027 c i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362051 1 - 8369475 c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959099 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275251 1 + 53671032 c i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729524 1 + 59248254 c i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603300 1 - 13342542 c i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526413 1 + 7714307 c i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329549 1 + 50890351 c i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962123 1 - 2385121 t i manLeu1.NW_012102454v1 C 0 C 0 s aotNan1.NW_018505377v1 420129 1 - 4471408 c i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e mm10.chr7 111150958 0 - 145441459 C e canFam3.chr1 4663634 0 - 122678785 C e cebCap1.NW_016107633v1 1673569 340 - 2680843 M e saiBol1.JH378197 5469570 906 + 8899380 M e calJac3.chr22 28616494 0 + 49145316 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M e panPan2.chr19 39950323 20 + 64411610 I a score=502447.000000 s hg38.chr19_GL383574v1_alt 138844 147 + 155864 atgccattctcctgcctcagcctcccaag--tagctgggactacaggcgcccgccaccatacctggctaactttttgtatttt-agtagagacggggtttcaccgtgttagccaggatggtctggatctcctgacctc--gtgatccgcccg s panTro5.chr19 36206162 148 + 61309027 atgccattctcctgcctcagcctcccaag--tagctgggactacaggcgcccgccaccatacctggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctggatctcctgacctc--gtgatccgcccg i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362052 148 - 8369475 atgccattctcctgcctcagcctcccaag--tagctgggactacaggcgcccgccaccatacctggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctggatctcctgacctc--gtgatccgccgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959100 148 - 106955855 atgccattctcctgcctcagcctcccgag--tagctgggactacaggtgcccgctaccatgcctggctaattttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctctatctcctgacctc--gtgatccacccg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275252 148 + 53671032 acgccattctcctgcttcagcctcccgag--tagctgggactgcaggcgcccgccaccatgcctggctaattttttgtatttttagtagagacggggtttcactgtgttagccaggatggtctcaatctcctgacctc--gtgatccaccca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729525 148 + 59248254 acgccattctcctgcttcagcctcccgag--tagctgggactgcaggcgcccgccaccatgcccggctaattttttgtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgacctc--gtgatccaccca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603301 148 - 13342542 atgccattctcctgcttcagcctcccgag--tagctgggactgcaggcgcccgccaccatgcccggctaattttttgtatttttagtagagacagggtttcacagtgttagccaggatggtcttgatctcctgacctc--gtgatccaccgg i macNem1.NW_012011689v1 C 0 I 62 s cerAty1.NW_012005268v1 5526414 143 + 7714307 acgccattctcctgcttcag-ctcccgagataagctgggactgggcggcgccgccaccatcccgggctaattttttgtattttt------gacggggtttcactgtgttagccaggatggtctcgatctcctgacctc--gtgatccaccca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329550 148 + 50890351 ctgccattctcctgcttcagcctcccgag--tatctgggactgcaggcgcccgccaccatgcccggctaattttttgtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgacctc--atgatccaccca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962124 149 - 2385121 aagtgattcttgtgcctcagcctcccaag--tagctggaattactggcgtgtgctaccatgctctgctaa-gttttgtatttttagtagagacagggtttcaccatgttggccagcctggtctggaactcctcgcctcaaatgatctgcccg i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e mm10.chr7 111150958 0 - 145441459 C e canFam3.chr1 4663634 0 - 122678785 C e aotNan1.NW_018505377v1 420130 0 - 4471408 C e cebCap1.NW_016107633v1 1673569 340 - 2680843 M e saiBol1.JH378197 5469570 906 + 8899380 M e calJac3.chr22 28616494 0 + 49145316 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M e panPan2.chr19 39950323 20 + 64411610 I a score=36831.000000 s hg38.chr19_GL383574v1_alt 138991 22 + 155864 cctcagcctcccaaagtgctgg s panTro5.chr19 36206310 22 + 61309027 cctcagcctcccaaagtgctgg i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362200 22 - 8369475 cctcagcctcccaaagtgctgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959248 13 - 106955855 tcttggcctccca--------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275400 22 + 53671032 cctcggcttcccaaagtgctgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729673 22 + 59248254 cctcggcttcccagagtgctgg i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5526557 22 + 7714307 ctttggcctcccaaagtgctgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329698 13 + 50890351 cctcagcctccca--------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962273 13 - 2385121 tctcagcctccca--------- i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e mm10.chr7 111150958 0 - 145441459 C e canFam3.chr1 4663634 0 - 122678785 C e aotNan1.NW_018505377v1 420130 0 - 4471408 C e cebCap1.NW_016107633v1 1673569 340 - 2680843 M e saiBol1.JH378197 5469570 906 + 8899380 M e calJac3.chr22 28616494 0 + 49145316 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M e macNem1.NW_012011689v1 4603449 62 - 13342542 I e panPan2.chr19 39950323 20 + 64411610 I a score=56827.000000 s hg38.chr19_GL383574v1_alt 139013 27 + 155864 aagtgctgggattacaggcCCGGCt--tt s panTro5.chr19 36206332 27 + 61309027 aagtgctgggattacaggcCCAGCT--TT i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362222 27 - 8369475 aagtgctgggattacaggcCCGGCt--tt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959261 27 - 106955855 aagtgctgggattacaggcctgGCC--tt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275422 16 + 53671032 ---------gattataggcctgGCC---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729695 16 + 59248254 ---------gattacaggcctgGCC---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603511 25 - 13342542 aagtgctgggattacaggcctgGCC---- i macNem1.NW_012011689v1 I 62 C 0 s cerAty1.NW_012005268v1 5526579 16 + 7714307 ---------gattacaggcctgGCC---- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329711 27 + 50890351 aagtgctgggattacaggcctgGCTTT-- i chlSab2.chr6 C 0 I 23 s manLeu1.NW_012102454v1 962286 27 - 2385121 aagtgctgggattacaggcctgGCCtt-- i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e mm10.chr7 111150958 0 - 145441459 C e canFam3.chr1 4663634 0 - 122678785 C e aotNan1.NW_018505377v1 420130 0 - 4471408 C e cebCap1.NW_016107633v1 1673569 340 - 2680843 M e saiBol1.JH378197 5469570 906 + 8899380 M e calJac3.chr22 28616494 0 + 49145316 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M e panPan2.chr19 39950323 20 + 64411610 I a score=48581.000000 s hg38.chr19_GL383574v1_alt 139040 40 + 155864 c-----ttttttttttttt--------------tttttttttt--gagacagtctcactca s panTro5.chr19 36206359 42 + 61309027 C-----ttttttttttttt--------------ttttttttttttgagacagtctcactca i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362249 34 - 8369475 c-----ttttttttttttt--------------tttt--------gagacagtctcactca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959288 31 - 106955855 t-----ttttttttttttt--------------ttttt-------gagacagt----ctca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275438 29 + 53671032 ------ttttttttttttt--------------tttt--------gtgatggtctca---- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729711 29 + 59248254 ------ttttttttttttt--------------tttt--------gtgatggtctca---- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603536 29 - 13342542 ------ttttttttttttt--------------tttt--------gtgatggtctca---- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526595 33 + 7714307 --ttttttttttttttttt--------------tttt--------gtgatggtctca---- i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 962313 49 - 2385121 tttttttttttttttttttagacggagtctcgctttt--------gtgatggtctca---- i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e mm10.chr7 111150958 0 - 145441459 C e chlSab2.chr6 29329738 23 + 50890351 I e canFam3.chr1 4663634 0 - 122678785 C e aotNan1.NW_018505377v1 420130 0 - 4471408 C e cebCap1.NW_016107633v1 1673569 340 - 2680843 M e saiBol1.JH378197 5469570 906 + 8899380 M e calJac3.chr22 28616494 0 + 49145316 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M e panPan2.chr19 39950323 20 + 64411610 I a score=147009.000000 s hg38.chr19_GL383574v1_alt 139080 38 + 155864 gtcacccaggctagagtgcggtggtgcaatctcggctt s panTro5.chr19 36206401 38 + 61309027 gtcacccaggctagagtgcagtggtgcaatctcggctt i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362283 38 - 8369475 gtcacccaggctagagtgcagtggtgcaatctcggctt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959319 38 - 106955855 gtcacccaggctagagtgcagtgatgcaatctcggctt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275467 38 + 53671032 gtcacccaggctggattgcagtggcacaatctcggctt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729740 38 + 59248254 gtcacccaggctggattgcagtggcacaatctcggctt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603565 38 - 13342542 gtcacccaggctggattgcagtggcacaatctcggctt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526628 38 + 7714307 gtcacccaggctggattgcagtggcacagtctcggctt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329761 38 + 50890351 gtcacccaggctggattgcagtggcacaatctcggctt i chlSab2.chr6 I 23 C 0 s manLeu1.NW_012102454v1 962362 38 - 2385121 gtcacccaggctggattgcagtggcacaatctcggctt i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e mm10.chr7 111150958 0 - 145441459 C e canFam3.chr1 4663634 0 - 122678785 C e aotNan1.NW_018505377v1 420130 0 - 4471408 C e cebCap1.NW_016107633v1 1673569 340 - 2680843 M e saiBol1.JH378197 5469570 906 + 8899380 M e calJac3.chr22 28616494 0 + 49145316 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M e panPan2.chr19 39950323 20 + 64411610 I a score=93285.000000 s hg38.chr19_GL383574v1_alt 139118 18 + 155864 actgcaacctccacctcc s panTro5.chr19 36206439 18 + 61309027 actgcaacctccagctcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950343 18 + 64411610 actgcaacctccacctcc i panPan2.chr19 I 20 C 0 s gorGor5.CYUI01015150v1 6362321 18 - 8369475 actgcaacctccacctcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959357 18 - 106955855 actgcaacctccacctcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275505 18 + 53671032 actgcaacctccacctcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729778 18 + 59248254 actgcaacctccacctcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603603 18 - 13342542 actgcaacctccacctcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526666 18 + 7714307 actgcaacctccacctcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329799 18 + 50890351 actgcaacctccacctcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962400 18 - 2385121 actgcaacctccacctcc i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e mm10.chr7 111150958 0 - 145441459 C e canFam3.chr1 4663634 0 - 122678785 C e aotNan1.NW_018505377v1 420130 0 - 4471408 C e cebCap1.NW_016107633v1 1673569 340 - 2680843 M e saiBol1.JH378197 5469570 906 + 8899380 M e calJac3.chr22 28616494 0 + 49145316 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=6600.000000 s hg38.chr19_GL383574v1_alt 139136 1 + 155864 c s panTro5.chr19 36206457 1 + 61309027 c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950361 1 + 64411610 c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362339 1 - 8369475 c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959375 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275523 1 + 53671032 c i rheMac8.chr19 C 0 I 6 s macFas5.chr19 34729796 1 + 59248254 c i macFas5.chr19 C 0 I 6 s macNem1.NW_012011689v1 4603621 1 - 13342542 c i macNem1.NW_012011689v1 C 0 I 6 s cerAty1.NW_012005268v1 5526684 1 + 7714307 c i cerAty1.NW_012005268v1 C 0 I 6 s chlSab2.chr6 29329817 1 + 50890351 c i chlSab2.chr6 C 0 I 6 s manLeu1.NW_012102454v1 962418 1 - 2385121 c i manLeu1.NW_012102454v1 C 0 I 6 s calJac3.chr22 28616494 1 + 49145316 c i calJac3.chr22 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e mm10.chr7 111150958 0 - 145441459 C e canFam3.chr1 4663634 0 - 122678785 C e aotNan1.NW_018505377v1 420130 0 - 4471408 C e cebCap1.NW_016107633v1 1673569 340 - 2680843 M e saiBol1.JH378197 5469570 906 + 8899380 M e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=29536.000000 s hg38.chr19_GL383574v1_alt 139137 5 + 155864 aagcg s panTro5.chr19 36206458 5 + 61309027 aagcg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950362 5 + 64411610 aagcg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362340 5 - 8369475 aagcg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959376 5 - 106955855 aagct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275530 5 + 53671032 aagtg i rheMac8.chr19 I 6 C 0 s macFas5.chr19 34729803 5 + 59248254 aagtg i macFas5.chr19 I 6 C 0 s macNem1.NW_012011689v1 4603628 5 - 13342542 aagtg i macNem1.NW_012011689v1 I 6 C 0 s cerAty1.NW_012005268v1 5526691 5 + 7714307 aagtg i cerAty1.NW_012005268v1 I 6 C 0 s chlSab2.chr6 29329824 5 + 50890351 aagtg i chlSab2.chr6 I 6 C 0 s manLeu1.NW_012102454v1 962425 5 - 2385121 aagtg i manLeu1.NW_012102454v1 I 6 C 0 s calJac3.chr22 28616495 5 + 49145316 aagtg i calJac3.chr22 C 0 C 0 s aotNan1.NW_018505377v1 420130 5 - 4471408 aagtg i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e mm10.chr7 111150958 0 - 145441459 C e canFam3.chr1 4663634 0 - 122678785 C e cebCap1.NW_016107633v1 1673569 340 - 2680843 M e saiBol1.JH378197 5469570 906 + 8899380 M e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=1465604.000000 s hg38.chr19_GL383574v1_alt 139142 199 + 155864 attctcctgcctcagcctcccaagtagctgaaattaccggcatgtgctaccacgctcggctaat-ttttgtatttttagtagagacagggtttcactgtgttggccagactggtctcaaactcctggcctcaagtgatctgcccgtctcagcctcccaaagtactgggattacaggcatgagccaccatgtctggccTTC s panTro5.chr19 36206463 199 + 61309027 attctcctgcctcagcctcccaagtagctgaaattaccggcctgtgctaccacgctcggctaat-ttttgtatttttagtagagacagggtttcactgtgttggccaggctggtctcaaactcctggcctcaagtgatctgcccgtctcagcctcccaaagtactgggattacaggcatgagccaccatgtctggccTTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950367 199 + 64411610 attctcctgcctcagcctcccaagtagctgaaattaccggcctgtgctaccacgctcggctaat-ttttgtatttttagtagagacagggtttcactgtgttggccaggctggtctcaaactcctggcctcaagtgatctgcccatctcagcctcccaaagtactgggattacaggcatgagccaccatgtctggccTTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362345 199 - 8369475 attctcctgcctcagcctcccaagtagctgaaattaccggcatgtgctaccacgctcggctaat-ttttgtatttttagtagagacagggtttcactgtgttggccaggccggtctcaaactcctggcctcaagtgatctgcccgtctcagcctcccaaagtactgggattacaggcatgagccaccatgtctggccTTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959381 199 - 106955855 attctcctgcctcagcctcccaagtagctgaaattaccggcgtgtgctaccacgctcggctaat-ttttgtatttttagtagagacagggtttcaccgtgttggccaggctggtcttgaactcctggcctcaagtgatctgcccgtctcagcctcccaaagtactgggattacaggcatgagccaccatgtctggccTTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275535 199 + 53671032 attcttgtgcctcagcctcccaagtagctggaattaccggcgtgtgctaccatgctctactaag-ttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctggaactcctcgcctcaaatgatctgcccgtctcagcctcccaaagtgctgggattacaggcatgagccaccatgtctgacTTTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34729808 199 + 59248254 attcttgtgcctcagcctcccaagtagctggaattaccggcgtgtgctaccatgctctgctaag-ttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctggaactcctcgcctcaaatgatctgcccgtctcagcctcccaaagtgctgggattacaggcatgagccaccatgtctgacTTTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603633 199 - 13342542 attcttgtgcctcagcctcccaagtagctggaattaccggcgtgtgctaccatgctctgctaag-ttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctggaactcctcgcctcaaatgatctgcccgtctcagcctcccaaagtgctgggattacaggcatgagccaccatgtcTCACTTTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526696 199 + 7714307 attcttgtgcctcagcctcccaagtagctggaattaccggcgtgtgctaccatgctctgctaag-ttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctggaactcctcgcctcaaatggtctgcccatctccgcctcccaaagtgctaggattacaggcatgagccaccatgtctggcTTTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29329829 199 + 50890351 attcttgtgcctcagcctcccaaggagctggaattaccggcatgtgctaccatgctctgctaat-ttttgtatttttagtagagacagggtttcaccatgttggccagcctggtctggaactcctcgcctcaaatgatctgcccgtctcagcctcccaaagtgctgggattacaggcatgagccaccatgtctggcTTTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962430 199 - 2385121 attcttgtgcctcagcctcccaagtagctggaattactggcgtgtgctaccatgctctgctaag-ttttgtatttttagtagagacagggtttcaccatgttggccagcctggtctggaactcctcgcctcaaatgatctgcccgtctcagcctcccaaagtgctgggattacaggcatgagccaccatgtctggcTTTC i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28616500 199 + 49145316 attcttgtgcctcagcctcccaagcagctggaattactggcgtgtgctaccatgctgggttaat-ttttgtatttttagtagagacagggtttcaccatattgcccaggctggtctcgaactcctggcctcaagtgatctacccatcttggcctctcaagatgttggtgttacaggcatgaagcaccacatctggACTTC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1673921 200 - 2680843 attctcctgccccagcctcctgagtcgctgggattacaggcacgcgccaccatgcccagctaatgttttgtatttttagtagagacagggtttcaccatgttgcccaggctggtctcaaactcctggcctcaagtgatctgcccatcttggcctttcaaggtgttggcgttacaggcatgaagcaccgAATCTGGACTTC i cebCap1.NW_016107633v1 M 340 C 0 s aotNan1.NW_018505377v1 420135 199 - 4471408 attctcgtgcctcagcctcccaagcagctggaattactggcgtgtgctaccatgctgggctaat-ttttgtatttttagtagagacagggtttcaccatgttgcccaggctggtctcgaactcctggcctcaagagatctgcccatcttggcctctcaagatgttggcgttacagacatgaagcaccacatctggACTTC i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e dasNov3.JH563638 401120 0 + 643850 C e otoGar3.GL873654 5538473 0 + 5549422 C e mm10.chr7 111150958 0 - 145441459 C e canFam3.chr1 4663634 0 - 122678785 C e saiBol1.JH378197 5469570 906 + 8899380 M e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=11385.000000 s hg38.chr19_GL383574v1_alt 139341 3 + 155864 GTG s panTro5.chr19 36206662 3 + 61309027 GTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950566 3 + 64411610 GTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362544 3 - 8369475 CTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959580 3 - 106955855 GTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275734 3 + 53671032 ATC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730007 3 + 59248254 ATC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603832 3 - 13342542 ATC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526895 3 + 7714307 ATC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330028 3 + 50890351 ATC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962629 3 - 2385121 ATC i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28616699 3 + 49145316 ATC i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1674121 3 - 2680843 ATC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 420334 3 - 4471408 ATC i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 401120 3 + 643850 GTC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e otoGar3.GL873654 5538473 0 + 5549422 C e mm10.chr7 111150958 0 - 145441459 C e canFam3.chr1 4663634 0 - 122678785 C e saiBol1.JH378197 5469570 906 + 8899380 M e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=46680.000000 s hg38.chr19_GL383574v1_alt 139344 4 + 155864 TAGT s panTro5.chr19 36206665 4 + 61309027 TAGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950569 4 + 64411610 TAGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362547 4 - 8369475 TAGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959583 4 - 106955855 TAGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275737 4 + 53671032 TAGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730010 4 + 59248254 TAGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603835 4 - 13342542 TAGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526898 4 + 7714307 TAGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330031 4 + 50890351 TAGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962632 4 - 2385121 TAGT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28616702 4 + 49145316 TAGT i calJac3.chr22 C 0 C 0 s cebCap1.NW_016107633v1 1674124 4 - 2680843 TAGT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 420337 4 - 4471408 TAGT i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5538473 4 + 5549422 TGAT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4663634 4 - 122678785 TAGT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 401123 4 + 643850 TAGT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e mm10.chr7 111150958 0 - 145441459 C e saiBol1.JH378197 5469570 906 + 8899380 M e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=64870.000000 s hg38.chr19_GL383574v1_alt 139348 5 + 155864 TTCAA s panTro5.chr19 36206669 5 + 61309027 TTCAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950573 5 + 64411610 TTCAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362551 5 - 8369475 TTCAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959587 5 - 106955855 TTCAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275741 5 + 53671032 TTCAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730014 5 + 59248254 TTCAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603839 5 - 13342542 TTCAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526902 5 + 7714307 TTCAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330035 5 + 50890351 TTCAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962636 5 - 2385121 TTCAA i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28616706 5 + 49145316 TTCAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5470476 5 + 8899380 TTCAA i saiBol1.JH378197 M 906 C 0 s cebCap1.NW_016107633v1 1674128 5 - 2680843 TTCAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 420341 5 - 4471408 TTCAA i aotNan1.NW_018505377v1 C 0 C 0 s otoGar3.GL873654 5538477 5 + 5549422 TTTAG i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4663638 5 - 122678785 TTCAA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 401127 5 + 643850 TTCAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 618998 3 + 2501019 I e micMur3.chr22 4003544 3 - 30143674 I e mm10.chr7 111150958 0 - 145441459 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=244774.000000 s hg38.chr19_GL383574v1_alt 139353 17 + 155864 GCATGTCCT---TTATTGCC s panTro5.chr19 36206674 17 + 61309027 GCATGTCCT---TTATTGCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950578 17 + 64411610 GCATGTCCT---TTATTGCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362556 17 - 8369475 GCATGTCCT---TTATTGCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959592 17 - 106955855 GCATGTTCT---TTATTGCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275746 17 + 53671032 GCATATTCT---TTATTGCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730019 17 + 59248254 GCATATTCT---TTATTGCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603844 17 - 13342542 GCATATTCT---TTATTGCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526907 17 + 7714307 GCATATTCT---TTATTGCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330040 17 + 50890351 GCATATTCT---TTATTGCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962641 17 - 2385121 GCATATTCT---TTATTGCC i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28616711 17 + 49145316 GCATGTTCT---TTATTGCC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5470481 17 + 8899380 GCATGTTCT---TTATTGCC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1674133 17 - 2680843 GCATGTTCT---TTATTTCC i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 420346 17 - 4471408 GCATGTTCT---TTATTGCC i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4003547 17 - 30143674 GCATGTTCT---TTACTGTT i micMur3.chr22 I 3 C 0 s proCoq1.NW_012149263v1 619001 17 + 2501019 GCATGTTCT---TTATTGTT i proCoq1.NW_012149263v1 I 3 C 0 s otoGar3.GL873654 5538482 17 + 5549422 GCATGTTCT---TTATTGTT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4663643 17 - 122678785 GCATGTTCT---TTGTTACC i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 401132 20 + 643850 GTATGTTTTGTGTTATTGTT i dasNov3.JH563638 C 0 C 0 e mm10.chr7 111150958 0 - 145441459 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=665800.000000 s hg38.chr19_GL383574v1_alt 139370 47 + 155864 TGAAATAGAAATCGCTGATGACTC--TAATTGTAGAAATGAATATTTTA s panTro5.chr19 36206691 47 + 61309027 TGAAATAGAAATCGCTGATGACTC--TAATTGTAGAAATGAATATTTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950595 47 + 64411610 TGAAATAGAAATCGCTGATGACTC--TAATTGTAGAAATGAATATTTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362573 47 - 8369475 TGAAATAGAAATCACTGATGACTC--TAATTGTAGAAATGAATATTTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959609 47 - 106955855 TGAAATAGAAATTGCTGATGACTC--TAATTGCAGAAATGAATATTTTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275763 48 + 53671032 TGAAATAGAAATCGCTGAAGACTC-TTAATTGCAGAAATGAATATTTTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730036 48 + 59248254 TGAAATAGAAATCGCTGAAGACTC-TTAATTGCAGAAATGAATATTTTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603861 48 - 13342542 TGAAATAGAAATCGCTGAAGACTC-TTAATTGCAGAAATGAATATTTTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526924 48 + 7714307 TGAAATAGAAATCGCTGAAGACTC-TTAATTGCAGAAATGAATATTTTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330057 49 + 50890351 TGAAATAGAAATCGCTGAAGACTCTTTAATTACAGAAATGAATATTTTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962658 48 - 2385121 TGAAATAGAAATCGCGGAAGACTC-TTAATTGCAGAAATGAATATTTTA i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28616728 47 + 49145316 TGAAATAGAAATCACTGATTACTT--TAATTGCAGAAATCAATATTTGA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5470498 47 + 8899380 TGAAATAGAAATCACTGATTACTT--TAATTGCAGAAATGAATATTTTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1674150 47 - 2680843 TGAAATAGAAATTACTGATTACTT--TAATTGCAGAAATGAATATTTTA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 420363 47 - 4471408 TGAAATAGAAATCGCTGATTACTT--TAATTGCAGAAATGAATATTTTA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4003564 47 - 30143674 TGAAATAGAAATTGCTGATGACTC--TGATTGCAGAAATGAATGTTTTA i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 619018 47 + 2501019 TGAAGCAGAAATTGCTGATGACTC--TGATTGCAGAAATGAGTGTTTTA i proCoq1.NW_012149263v1 C 0 C 0 s otoGar3.GL873654 5538499 47 + 5549422 TGAAATAGAAATTGCTGATGACTC--TGATTGCAGAAATGaatatttta i otoGar3.GL873654 C 0 I 2022 s mm10.chr7 111150958 34 - 145441459 TGAAATAGAACTTGTTGGGTAGTT------TGAAGGAATG--------- i mm10.chr7 C 0 C 0 s canFam3.chr1 4663663 47 - 122678785 TGAAATCGAAATTACTAACGATTT--CTATTGCAGAAAGGAATGTTTTA i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 401152 47 + 643850 TGAAATAGAAATTGCTGGTGGCTT--TGATTGCAGAAAGGAATGTTTTA i dasNov3.JH563638 C 0 C 0 e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=1284338.000000 s hg38.chr19_GL383574v1_alt 139417 96 + 155864 AATGATATAATTATGGCTGAATTCAGTTTTAATCTGTGGAGAACTTTTGCAAATTAT------GTTGAAAAGATGTTACTT--------AAAATGTT---------CTTTTCTGCTATG s panTro5.chr19 36206738 99 + 61309027 AATGATATAATTATGGCTGAATTCAATTTTAATCTGTGGAGAACCTTTGCAAATTATT---ATGTTGAAAAGATGTTACTT--------AAAATGTT---------CTTTTCTGCTATG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950642 99 + 64411610 AATGATATAATTATGGCTGAATTCAATTTTAATCTGTGGAGAACCTTTGCAAATTATT---ATGTTGAAAAGATGTTACTT--------AAAATGTT---------CTTTTCTGCTATG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362620 99 - 8369475 AATGATATAATTATGGCTGAATTCAGTTTTAATCTGTGGAGAACCTTTGCAAATTATT---ATGTTGAAAAGATGTTACTT--------AAAATGAT---------CTTTTCTGCTATG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959656 99 - 106955855 AATGATATAATTATGGCTGAATTCAGTTTTAATCTGTGGAGAACCTTTGTAAATTATT---ATGTTGAAAAGATGTTACTT--------AAAATGTT---------CTTTTCTGCTGTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275811 99 + 53671032 AATGATATAATTATGGCTTAATTCAGTTTTAATCTATTGAGAACCTTTGCAAATTATT---ATGTTGAAAAGATGTTACTT--------AAAATGTT---------CTTTTCTGCTATG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730084 99 + 59248254 AATGATATAATTATGGCTTAATTCAGTTTTAATCTATTGAGAACCTTTGCAAATTATT---ATGTTGAAAAGATGTTACTT--------AAAATGTT---------CTTTTCTGCTATG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4603909 99 - 13342542 AATGATATAATTATGGCTTAATTCAGTTTTAATCTGTTGAGAACCTTTGCAAATTATT---ATGTTGAAAAGATGTTACTT--------AAAATGTT---------CTTTTCTGCTATG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5526972 99 + 7714307 AATGATATAATTATGGCTTAATTCAGTTTTAATCTATTGAGAACCTTTGCAAATTATT---ATGTTGAAAAGATGTTACTT--------AAAATGTT---------CTTTTCTGCTATG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330106 98 + 50890351 AATGATATAATTATGGCTTAATTCAGTTTTAATCTGTTGAGAACCTCTGCAAA-TATT---ATGTTGAAAAGATGTTAATT--------AAAATGTT---------CTTTTCTGCTATG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962706 99 - 2385121 AATGATATAATTATGGCTTAATTCAGTTTTAATCTATTGAGAACCTTTGCAAATTATT---ATGTTGAAAAGATGTTACTT--------AAAATGTT---------CTTTTCTGCTATG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28616775 102 + 49145316 AATGATATAATTATGGCTGAATTCAGTTTTAATTAATTGAGAACCTTTGCAAATTATTATGATGTTGAAAAGACGTTACTT--------AAAATGTT---------CTTTTCTGCTGTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5470545 102 + 8899380 AATGATATAATTATGGCTGAATTCAGTTTTAATTTATTGAGAACCTTTGCAAATTATTATGATGTTGAAAAGATGTTACTT--------AAAATGTT---------CTTTTCTGCTGTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1674197 102 - 2680843 AATGATATAATTATGGCTGAATTCAGTTTTAATTTATTGAGAACCTTTGCAAATTATTATGATGTTGAAAAGATGTTACTT--------AAAATGTT---------CTTTTCTGCTGTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 420410 102 - 4471408 AATGATATAATTATGGCTGAATTCAGTTTTAATTTATTGAGAACCTTTGCAAATTATTATGATGTTGAAAAGATGTTACTT--------AAAATGTT---------CTTTTCTGCTGTG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4003611 106 - 30143674 AATGATGTAATCATGTCCGAGTTGCATTTTAATTTATTGAGAACCTTTGCAAATTATT---GTGTGGAAAAGATGTGACTTAACTACTAAAAATGCT----------TTTTTTGCTATG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 619065 106 + 2501019 AATGATGTAATCATGTCCGAGTTCCATTTTAGTTTATTGAGAACCTTTGCAAATTATT---GTGTTGAAAAGATGTGACTTAACCTACTAAAATGCT----------TTTTTTGCTATG i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111150992 101 - 145441459 ---GATGTAATTG-GTCTGTATTTA-----AATCTATTGAGAACCTTTGCAAGTTATG-TCATGTTGAAAAGGTGCCATTT--------AACCTACTGAAGTGTAATTTTTCTGATATG i mm10.chr7 C 0 I 426 s canFam3.chr1 4663710 109 - 122678785 AATGACATAATCATGTCTGAGTTCAGTTTTAATCTATTTAGAATTTTAGCAAACTACTGTGGTGTTGAAAAAATGTGACTT-ATGTCCTAAAACGTC---------CTTTTCAGCTATG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 401199 109 + 643850 AATGATGTAATTAGGTCTGAGTTCAATTTTAATCCTTTGGGGACTTTTGCAAATTATTGTGGTGTTGAAATGATGAGATTT-CCTTGCTAAAATGTC---------CTTTTCTGCTACA i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5538546 2022 + 5549422 I e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=663120.000000 s hg38.chr19_GL383574v1_alt 139513 58 + 155864 TATTTGAT-TTTTTAAGTAGCATTAAAACTT------------------------------AAGAGTACATGAC--AAATCTC-ACAAGTCT s panTro5.chr19 36206837 59 + 61309027 TATTTGATATTTTTAAGTAGCATTAAAACTG------------------------------AAGAGTACATGAC--AGATCTC-AGAAGTCT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950741 59 + 64411610 TATTTGATATTTTTAAGTAGCATTAAAACTT------------------------------AAGAGTACATGAC--AAATCTC-AGAAGTCT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362719 59 - 8369475 TATTTGATATTTTTAAGTAGCATTAAAACTT------------------------------AAGAGTACATGAC--AAATCTC-ACAAGTCT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959755 59 - 106955855 TATTTGATATTTTTAAGTAGCATTAAAACTT------------------------------AAGAGTACATGAC--AGATCTC-ACAAGTCT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275910 59 + 53671032 TATTTGATATTTTTAAGTAGCATTAAAACTT------------------------------AAGAGTACATGAC--AGATCTC-ACAAGTTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730183 59 + 59248254 TATTTGATATTTTTAAGTAGCATTAAAACTT------------------------------AAGAGTACATGAC--AGATCTC-ACAAGTTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4604008 59 - 13342542 TATTTGACATTTTTAAGTAGCATTAAAACTT------------------------------AAGAGTACATGAC--AGATCTC-ACAAGTTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5527071 59 + 7714307 TATTTGATATTTTTAAGTAGCATTAAAACTT------------------------------AAGAGTACATGAC--AAATCTC-ACAAGTTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330204 59 + 50890351 TATTTGATATTTTTAAGTAGCATTAAAACTT------------------------------AAGAGTACATGAC--AAATCTC-ACAAGTTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962805 59 - 2385121 TATTTGATATTTTTAAGTAGCATTAAAACTT------------------------------AAGAGTACATGAC--AAATCTC-ACAAGTTT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28616877 59 + 49145316 TATTTGATAATTTTAAGTAACATTAAAACTT------------------------------AGAAATACATGAC--AAATCTC-ACAAGTCT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5470647 59 + 8899380 TATTTGATAGTTTTAAGTAACATTAAAACTT------------------------------AGAAATACATGAC--AAATCTC-ACAAGTCT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1674299 59 - 2680843 TATTTGATAATTTTAAGTAACATTAAAACTT------------------------------AGAAATACATGAC--AAATCTC-ACAAGTCT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 420512 59 - 4471408 TATTTGATAATTTTAAGTAACATTAAAACTT------------------------------AGAAATACATGAC--AAATCTC-ACAAGTCT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4003717 61 - 30143674 TGTTTGAGAATTTTAAGTAGCATTAAAACTT------------------------------TTGAATACATTACTTAAATCTT-ACAAGTCT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 619171 62 + 2501019 TATTTGAGAATTTTAAGTAGCATTAAAACTT------------------------------TTGAATATGTTACTTAAATCTTAACAAGTCT i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4663819 91 - 122678785 TGTTTGTGACTCTCAGGAAGCATTATAGCTTCCTGTGACTCTCAAGAAGCATAAAGCATTAAAGAATAAAGTACTTAAATTTT-ACAAGTCT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 401308 58 + 643850 TGTTTAGAATCTT--AGCAGTATTAAAACTT------------------------------GGGAATACATTAT-TTAGTCTT-AAAAGTCT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151093 426 - 145441459 I e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=1948045.000000 s hg38.chr19_GL383574v1_alt 139571 132 + 155864 TGGCTACA-CTAACTTCTGAGGTCTTTCACAATGCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGAAAATTCTTTTTAAGAAAATACGGAAAAGAAATGTCCTT s panTro5.chr19 36206896 132 + 61309027 TGGCTACA-CTAGCTTCTGAGGTCTTTCACAATGCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGAAAATTCTTTTTAAGAAAATACGGAAAAGAAATGTCCTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950800 132 + 64411610 TGGCTACA-CTAGCTTCTGAGGTCTTTCACAATGCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGAAAATTCTTTTTAAGAAAATACGGAAAAGAAATGTCCTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362778 132 - 8369475 TGGCTACA-CTAACTTCTGAGGTCTTTCACAATGCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGAAAATTCTTTTTAAGAAAATACGGAAAAGAAATGTCCTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959814 132 - 106955855 TGGCTACA-CTAACTTCTGAGGTCTTTCACAATGCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGGAAATTCTTTTTAAGAAAATATGGAAAAGAAATGTCCTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30275969 132 + 53671032 TGGCTACA-CTAACTTCTGAGGTCTTTCACAATGCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGAAAATTCTTTTTAAGAAAATATGGAAAAGAAATGTCCTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730242 132 + 59248254 TGGCTACA-CTAACTTCTGAGGTCTTTCACAATGCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGAAAATTCTTTTTAAGAAAATATGGAAAAGAAATGTCCTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4604067 132 - 13342542 TGGCTACA-CTAACTTCTGAGGTCTTTCACAATGCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGAAAATTCTTTTTAAGAAAATATGGAAAAGAAATGTCCTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5527130 132 + 7714307 TGGCTACA-CTAACTTCTGAGGTCTTTCACAATGCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGAAAATTCTTTTTAAGAAAATATGGAAAAGAAATGTCCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330263 132 + 50890351 TGGCTACA-CTAACTTCTGAGGTCTTTCACAATGCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGAAAATTCTTTTTAAGAAAATATGGAAAAGAAATGTCCTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962864 132 - 2385121 TGGCTACA-CTAACTTCTGAGGTCTTTCACAATGCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGAAAATTCTTTTTAAGAAAATATGGAAAAGAAATGTCCTT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28616936 132 + 49145316 TGGCTACA-CTAACTTCTGAGGTCTTTCACAATGCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGAAAATTCTTTTTAAGAAAATGTGGAAAAAAAATGTCCTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5470706 132 + 8899380 TGGCTACA-CTAACTTCTGAGGTTTTTCACAATGCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGAAAATTCTTTTTAAGAAAATATGGAAAAGAAATGTCCTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1674358 132 - 2680843 TGGCTACA-CTAACTTCTGAGGTCTTTCACCATGCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGAAAATTCTTTTTAAGAAAATATGGAAAAGAAATGTCCTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 420571 132 - 4471408 TGGCTACA-CTAACTTCTGAGGTCTTTCACAATGCGCATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGAAAATTCTTTTTAAGAAAATATGGAAAAGAAATGTCCTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4003778 132 - 30143674 TGGCTACA-CTAACTTCTGAGGTCTTTCCTAATTCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGAGAATGTTTTTCCAGTGAAAATTCTTTTTAAGAAAATAAGGAAAAGAAATGCCCTT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 619233 132 + 2501019 TGGCTACA-CTAACTTCTGAGGTCTTTCACAATTCGTATTTATTT--CCATGCAGCATGAATAGTGGATTCATAAATGGTGAATGTTTTCCCAGTGAAAATTCTTTTAAAGAAAATATGGAAAAGAAATGTCCTT i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111151519 126 - 145441459 TGCCTGCA-CTAACTTGTACAGCCTTTCACAGTGAGTATTTATGT--CCATACTGTGTGCA-----GCTTCCTATATTTTGAATGTTTTACTGGTGACGGTT-TTATAAAGAGGATATGAAAGAGAAATATTttt i mm10.chr7 I 426 I 2982 s canFam3.chr1 4663910 128 - 122678785 TGGCTACAGCTAACTTCTGAGGTC-TTCACAATATATATTGATTCCGCAATGCA-TATGAATAATGGATTCATAAATGATGAATATTTTCCCAGTGAAAACTCTTACTGAGAAAATAC-----AGAAATTTCCTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 401366 124 + 643850 TTACTATAGCTAACTGCTGAAGTCTTTCACTAT--GTATTTAGCT--CCATGCAGGACCAATATTGGATTTTTAAATGGTGACTATTTTATCAGTGAAAATTATTTTTAAG-------GAAAAAAAAAAATCCTT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5538546 2022 + 5549422 I e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=1034785.000000 s hg38.chr19_GL383574v1_alt 139703 81 + 155864 AAATGGTTTGAACATATTTTAGCCTGACAGGCAGATAAATATGAGGGTGGAGAAGCATGTGAAAAACATTTAGACAGCATt s panTro5.chr19 36207028 81 + 61309027 AAATGGTTTGAACATATTTTAGCCTGTCAGGCAGATAAATATGAGGGTGGAGAAGCATGTGAAAAACATTTAGACAGCATt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39950932 81 + 64411610 AAATGGTTTGAACATATTTTAGCCTGTCAGGCAGATAAATATGAGGGTGGAGAAGCATGTGAAAAACATTTAGACAGCATt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362910 81 - 8369475 AAATGGTTTGAACATATTTTAGCCTGTCAGGCAGATAAATATGAGGGTGGAGAAGCATGTGAAAAACATTTAGACAGCATt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63959946 81 - 106955855 AAATGGTTTGAACATATTTTAGCCTGTCAGGCAGATAAATATGAGGGTGGAGAAGCATGTGAAAAACTATTAGACAGCATt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30276101 81 + 53671032 AAATGGATTGAACATATTTTAGCCTGTCAGGCAGATAAATATGGGGGTGGAGAAGCATGTGAAAAACATTTAGACAGCATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730374 81 + 59248254 AAATGGATTGAACATATTTTAGCCTGTCAGGCAGATAAATATGGGGGTGGAGAAGCATGTGAAAAACATTTAGACAGCATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4604199 81 - 13342542 AAATGGATTGAACATATTTTAGCCTGTCAGGCAGATAAATATGGGGGTGGAGAAGCATGTGAAAAACATTTAGACAGCATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5527262 81 + 7714307 AAATGGATTGAACATATTTTAGCCTGTCAGGCAGATAAATATGGGGGTGGAGAAGGATGTGAAAAACATTTAGACAGCATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330395 81 + 50890351 AAATGGATTGAACATATTTTAGCCTGTCAGACAGATAAATATGGGGGTGGAGAAGCATGTGAAAAACATTTAGACAGCATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 962996 81 - 2385121 AAATGGATTGAACATATTTTAGCCTGTCAGGCAGATAAATATGGGGGTGGAGAAGCATGTGAAAAACATTTAGACAGCATT i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28617068 81 + 49145316 AAATGGATTGAACATATTTTATCCTGTCAGGCAGATAAATATGGGGTTGGGGAAGCATGTGAAAAACATTTAGACAGCATT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5470838 81 + 8899380 AAATGGATTGAACATATTTTAGCTTGTCAGGCAGATAAATATGGGGTTGGGGAAGCATGTGAAAAATATTTAGACAGCATT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1674490 81 - 2680843 AAATGGATTGAACATATTTTAGCCTGTCAGGCAGATAAATATGGGGTTGGGGAAGCATGTGAAAAACATTTAGACAGCATT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 420703 81 - 4471408 AAATGGATTGAACATATTTTAGCCTGTCAGGCAGATAAATATGGGGCTGGGGAAGCATGTGAAAACCATTTAGACAGCATT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4003910 78 - 30143674 AAATGGATTGAACATATTTTAGCCTTTCAGGCAGCATAATATGGT---AGGAAAGCATTTGAAAAACATTGAGACAGCATT i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 619365 78 + 2501019 AAATGGATTGAACATATTTTAGCCTTTCAGGCAGATTAATATGGG---GGGAACGCATTTGAAAAACATTGAGACAGCATT i proCoq1.NW_012149263v1 C 0 I 5601 s canFam3.chr1 4664038 73 - 122678785 AAATGGATTGAACATATTTTAGCCCTTCAGGCAGATAAATATGG----GGGAAAGCTTTAGGAAAACATTA----AGCATT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 401490 77 + 643850 AACCGGACTGAGCATATTTTAGCTCTTCAGGTAAATAAATA---GGACGGAAAAGCATATGAAAATTATTGGCA-AGCATT i dasNov3.JH563638 C 0 C 0 e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=137835.000000 s hg38.chr19_GL383574v1_alt 139784 11 + 155864 aagaagaattt s panTro5.chr19 36207109 11 + 61309027 aagaagaattt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951013 11 + 64411610 aagaagaattt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6362991 11 - 8369475 aagaagaattt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63960027 11 - 106955855 aagaagaattt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30276182 11 + 53671032 AGGAAGAATTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730455 11 + 59248254 AGGaagaattt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4604280 11 - 13342542 AGGaagaattt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5527343 11 + 7714307 AGGaagaattt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330476 11 + 50890351 AGGAAGAATTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 963077 11 - 2385121 AGGaagaattt i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28617149 11 + 49145316 AGGAAGAATTT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5470919 11 + 8899380 AGGAAGAATTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1674571 11 - 2680843 AGAAAGAATTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 420784 11 - 4471408 AGGAAGAATTT i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4003988 11 - 30143674 TGGAAGAATTT i micMur3.chr22 C 0 I 1201 s canFam3.chr1 4664111 11 - 122678785 AAGAAGAATTT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 401567 11 + 643850 GGGAAGGATTT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=33256.000000 s hg38.chr19_GL383574v1_alt 139795 3 + 155864 tat s panTro5.chr19 36207120 3 + 61309027 tat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951024 3 + 64411610 tat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363002 3 - 8369475 tat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63960038 3 - 106955855 tat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30276193 3 + 53671032 TAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730466 3 + 59248254 tat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4604291 3 - 13342542 tat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5527354 3 + 7714307 tat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330487 3 + 50890351 TAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 963088 3 - 2385121 tat i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28617160 3 + 49145316 TAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5470930 3 + 8899380 TAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1674582 3 - 2680843 TAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 420795 3 - 4471408 TAT i aotNan1.NW_018505377v1 C 0 C 0 s canFam3.chr1 4664122 3 - 122678785 TAT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 401578 1 + 643850 --T i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=700289.000000 s hg38.chr19_GL383574v1_alt 139798 86 + 155864 taaaataatg---ataataataataattagctgggcacggtggcatatgcctgtagtcccagctactggggaggctgcagtaggaggat s panTro5.chr19 36207123 86 + 61309027 taaaataatg---ataataataataattagctgggcacggtggcatatgcctgtagtcccagctactggggaggctgcagtaggaagat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951027 86 + 64411610 taaaataatg---ataataataataattagctgggcacggtggcatatgcctgtagtcccagctactggggaggctgcagtaggaagat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363005 86 - 8369475 taaaataatg---ataataataataattagctgggcacggtggcatatgcctgtagtcccagctgctggggaggctgcagtaggaggat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63960041 86 - 106955855 taaaataatg---ataataataataattagctgggcacggtggcatatgtctgtagtcccagctactggggaggctgcagtaggaggat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30276196 86 + 53671032 TAAAATAATG---ATAATAATaataattagctgggcatggtggcatgtgcctgtagtcccagctactagggaggctgcagtaggaggat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730469 86 + 59248254 taaaataatg---ataataataataattagctgggcatggtggcatgtgcctgtagtcccagctactagggaggctgcagtaggaggat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4604294 86 - 13342542 taaaataatg---ataataataataattagctgggcatggtggcatgtgcctgtagtcccagctactagggaggctgcagtaggaggat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5527357 86 + 7714307 taaaataatg---ataataataataattagctgggcatggtggcatgtgcctgtagtcccagctactagggaggctgcagtaggaggat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330490 89 + 50890351 TAAAATAATGAtaataataataataattagctgggcatggtggcatgtgcctgtagtcccagctactagggaggctgcggtaggaggat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 963091 86 - 2385121 taaaataatg---ataataataataattaactgggcatggtggcatgtgcttgtagtcccagctactagggagtctgcagtaggaggat i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28617163 80 + 49145316 CAAA---------ATAATAATAGTaattagctgggcatagtggcatgtgcctgtagtcccagccactggggaggctgcagtaagaggat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5470933 80 + 8899380 TAaa---------ataataataataattagctgggcatggtggcatgtgcctgtagtcccagctactggggaggctgcagtaagaggat i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1674585 80 - 2680843 TAGa---------aaaataataataattagctgggcatggtggcatgtgcctgtagtcccagctactggggaggctgcagtaagaggat i cebCap1.NW_016107633v1 C 0 I 17 s aotNan1.NW_018505377v1 420798 77 - 4471408 Taa------------aataataataattagctgggcatggtggcatgtgcctgtagtcccagctactgaggaggctgcagtaagaggat i aotNan1.NW_018505377v1 C 0 C 0 s dasNov3.JH563638 401579 17 + 643850 -------------ATATTTATACAAAATAT----------------------------------------------------------- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664125 0 - 122678785 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=6318.000000 s hg38.chr19_GL383574v1_alt 139884 1 + 155864 c s panTro5.chr19 36207209 1 + 61309027 c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951113 1 + 64411610 c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363091 1 - 8369475 c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63960127 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30276282 1 + 53671032 c i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730555 1 + 59248254 c i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4604380 1 - 13342542 c i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5527443 1 + 7714307 c i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330579 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 963177 1 - 2385121 c i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28617243 1 + 49145316 c i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5471013 1 + 8899380 c i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 420875 1 - 4471408 c i aotNan1.NW_018505377v1 C 0 I 16 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 401596 0 + 643850 C e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664125 0 - 122678785 C e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=109651.000000 s hg38.chr19_GL383574v1_alt 139885 16 + 155864 atctgagcccaggagg s panTro5.chr19 36207210 16 + 61309027 acctgagcccaggagg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951114 16 + 64411610 acctgagcccaggagg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363092 16 - 8369475 acctgagcccaggagg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63960128 16 - 106955855 acctgagcccaggagg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30276283 16 + 53671032 acctgagcccaggagg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730556 16 + 59248254 acctgagcccaggagg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4604381 16 - 13342542 acctgagcccaggagg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5527444 16 + 7714307 acctgagcccaggagg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330580 16 + 50890351 acctgagcccaggagg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 963178 16 - 2385121 acctgagcccaggagg i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28617244 16 + 49145316 accggagcctgggagg i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5471014 16 + 8899380 accggagcctgggagg i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 401596 0 + 643850 C e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664125 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=298040.000000 s hg38.chr19_GL383574v1_alt 139901 64 + 155864 cagaggttacagtgagccgagatcacgccactgcactccagcctgggtgacagagccagaccca s panTro5.chr19 36207226 64 + 61309027 cagaggttacagtgagccgagatcacaccactgcactccagcctgggtgacagagccagaccca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951130 64 + 64411610 cagaggttacagtgagccgagatcacgccactgcactccagcctaggtgacagagccagaccca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363108 64 - 8369475 cagaggttacagtgagccgagatcacgccactgcgctccagcctgggtgacacagccagaccca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63960144 64 - 106955855 cagaggttacagtgagccgagatcacgccactgcactccagcttgggtgatagagccagaccca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30276299 64 + 53671032 cagaggttacagtgagctgagatcacgccactgtactccagcctgggtgacagagccagacccg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730572 64 + 59248254 cagaggttacagtgagctgagatcacgccactgtactccagcctgggtgacagagccagacccg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4604397 64 - 13342542 cagaggttacagtgagctgagatcacgccactgtactccagcctgggtgacagagccagacccg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5527460 64 + 7714307 cagaggttacagtgagctgagatcacgccactgtactccagcctgggtgacagagccagaccta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330596 64 + 50890351 cagaggttacagtgagctgagatcacaccactgtactccagcctgactgacagagccagaccca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 963194 64 - 2385121 cagaggttacagtgagctgagatcacgccactgtactccagcctgggtgacagagccagaccca i manLeu1.NW_012102454v1 C 0 C 0 s dasNov3.JH563638 401596 8 + 643850 --GAGGTTAT------------------------------------------------------ i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664125 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=23166.000000 s hg38.chr19_GL383574v1_alt 139965 5 + 155864 gtctc s panTro5.chr19 36207290 5 + 61309027 gtctc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951194 5 + 64411610 gtctc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363172 5 - 8369475 gtctc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63960208 5 - 106955855 gtctc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30276363 5 + 53671032 atctc i rheMac8.chr19 C 0 I 8 s macFas5.chr19 34730636 5 + 59248254 atctc i macFas5.chr19 C 0 I 8 s macNem1.NW_012011689v1 4604461 5 - 13342542 atctc i macNem1.NW_012011689v1 C 0 I 8 s cerAty1.NW_012005268v1 5527524 5 + 7714307 atctc i cerAty1.NW_012005268v1 C 0 I 8 s chlSab2.chr6 29330660 5 + 50890351 atctc i chlSab2.chr6 C 0 I 8 s manLeu1.NW_012102454v1 963258 5 - 2385121 atctc i manLeu1.NW_012102454v1 C 0 I 8 s canFam3.chr1 4664125 5 - 122678785 GTTTA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 401604 0 + 643850 C e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2403803 1642 + 4274983 M a score=1873532.000000 s hg38.chr19_GL383574v1_alt 139970 284 + 155864 aataaataaat-aaaaacagaaataaaaTAATAAAATCCAGgtgttcgtgtgtg--tgtgtgtgtctgtgtgtgCAttttcaacattttgtttcagaaatgttcaatcatatacaacattggagcaagtgatatgatgcacctc-atgtacccatcacctaacttccaacagtattttgtcaGGGGATATTATGATCACTGCCATGAAGACAAATGCTTAGGTAGGTATTACCACCTTCTCTGTACATTGTTTCTTGGCAAAATGTCATTTGAAAATGATAGAACTCg s panTro5.chr19 36207295 286 + 61309027 aataaataaat-aaaaacagaaataaaaTAATAAAATCCAGgtgttcgtgtgtgcgtgtgtgtgtctgtgtgtgCAttttcaacattttgtttcagaaatgttcaatcatatacaacattggagcaagtgatatgatgcacctc-atgtacccatcacctaagttccaacagtattttgtcaGGGGATATTATGATCACTGCCATGAAGACAAATGCTTAGGTAGGTATTACCACCTTCTCTGTACATTGTTTCTTGGCAAAATGTCATTTGAAAATGATAGAACTCg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951199 284 + 64411610 aataaataaat-aaaaacagaaataaaaTAATAAAATCCAGgtgttcgtgtgtg--tgtgtgtgtctgtgtgtgCAttttcaacattttgtttcagaaatgttcaatcatatacaacattggagcaagtgatatgatgcacctc-atgtacccatcacctaagttccaacagtattttgtcaGGGGATATTATGATCACTGCCATGAAGACAAATGCTTAGGTAGGTATTACCACCTTCTCTGTACATTGTTTCTTGGCAAAATGTCATTTGAAAATGATAGAACTCg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363177 285 - 8369475 aataaataaataaaaaacagaaataaaaTAATAAAATGCAGgtgttcgtgtgtg--tgtgtgtgtctgtgtgtgCAttttcaacattttgtttcagaaatgttcaatcatatacaacattggagcaagtgatatgatgcacctc-atgtacccatcacctaacttccaacagtattttgtcaGGGGATATTATGATCACTGCCATGAAGACAAATGCTTAGGTAGGTATTACCACCTTCTCTGTGCATTGTTTCTTGGCAAAATGTCATTTGAAAATGATAGAACTCg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63960213 284 - 106955855 aataaataaat-aaaaacagaaataaaaTAATAAAATCCAGgtgttcgtgtgtg--tgtgtgtgtgtctgtgtgCAttttcaacattttgtttcagaaatgttcaatcatatacaacattggagcaagtgatgtgatgcacctc-atgtacgcatcacctaacttccaacagtattttgtcaGGGGATATTATGATCACTGCCATGAAGACAAATGCTTAGGTAGATATTACCACCTTCTCTGTACATTGTTTCTTGGCAAAATGTCATTTGAAAATGATAGAACTTg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30276376 280 + 53671032 aataaataaac-aaaaacagaaaTAAAATAATAAAATCCAGgtgttc----gtg--tgtgtgtgttcgtgtgtgCAttttcaacattctgtttcagaaatgttcagtcatatacaaccatggagcaagtgatatgatgcacttc-atgtacccatcacctaacttccaacagtattttgtcaGGGCATATTATGATCACTGCCATGAAGACAAATGCTTAGGTAGGTATTACCACTTTCTCTGTACATTGTTTCTTGGCAAAATGCCATTTGAAAATGATAGAACTCg i rheMac8.chr19 I 8 C 0 s macFas5.chr19 34730649 280 + 59248254 aataaataaac-aaaaacagaaaTAAAATAATAAAATCCAGgtgttc----gtg--tgtgtgtgttcgtgtgtgCAttttcaacattctgtttcagaaatgttcagtcatatacaaccatggagcaagtgatatgatgcacttc-atgtacccatcacctaacttccaacagtattttgtcaGGGCATATTATGATCACTGCCATGAAGACAAATGCTTAGGTAGGTATTACCACTTTCTCTGTACATTGTTTCTTGGCAAAATGCCATTTGAAAATGATAGAACTCg i macFas5.chr19 I 8 C 0 s macNem1.NW_012011689v1 4604474 280 - 13342542 aataaataaac-aaaaacagaaaTAAAATAATAAAATCCAGgtgttc----gtg--tgtgtgtgttcgtgtgtgCAttttcaacattctgtttcagaaatgttcagtcatatacaaccatggagcaagtgatatgatgcacttc-atgtacccatcacctaacttccaacagtattttgtcaGGGCATATTATGATCACTGCCATGAAGACAAATGCTTAGGTAGGTATTACCACTTTCTCTGTACATTGTTTCTTGGCAAAATGCCATTTGAAAATGATAGAACTCg i macNem1.NW_012011689v1 I 8 C 0 s cerAty1.NW_012005268v1 5527537 280 + 7714307 aataaataaac-aaaaacagaaaTAAAATAATAAAATCCAGgtgttc----gtg--tgtgtgtgttcgtgtgtgCAttttcaacattctgtttcagaaatgttcagtcatatacaaccatggagcaagtgatatgatgcacttc-atgtacccatcacctaacttccaacagtattttgtcaGGGCATATTATGATCACTGCCATGAAGACAAATGCTTAGGTAGGTATTACCACTTTTTCTGTACATTGTTTCTTGGCAAAATGCCATTTGAAAATGATAGAACTCg i cerAty1.NW_012005268v1 I 8 C 0 s chlSab2.chr6 29330673 279 + 50890351 aataaat---t-taaaaaacaaataaaaTAATAAAATCCAGGCGTTC--gtgtg--tgtgtgtgttcgtgtgtgCAttttcaacattctgtttcagaaatgttcagtcatatacaatcatggagcaagtgatatgatccacttc-atgtacccatcacttaacttccaacagtattttgtcaGGGCATATTATGATCACTGCCATGAAGACAAATGCTTAGGTAGGTATTACCACTTTCTCTGTACATTGTTTCTTGGCAAAATGCCATTTGAAAATGATAGAACTCg i chlSab2.chr6 I 8 C 0 s manLeu1.NW_012102454v1 963271 280 - 2385121 aataaataaac-aaaaacagaaaTAAAATAATAAAATCCAGgtgttc----gtg--tgtgtgtgttcgtgtgtgCAttttcaacattctgtttcagaaatgttcagtcatatacaaccatggagcaagtgatatgatgcacttc-atgtacccatcacctaacttccaacagtattttgtcaGGGCATATTATGATCACTGCCATGAAGACAAATGCTTAGGTAGGTATTACCACTTTCTCTGTACATTGTTTCTTGGCAAAATGCCATTTGAAAATGATAGAACTCg i manLeu1.NW_012102454v1 I 8 C 0 s colAng1.NW_012111697v1 2405479 284 + 4274983 AATAAACAAAC-AAAAACAGAAATAAAATAATAAAATCCAGgtgttcgtgtgtg--tgtgtgtgtttgtgtgtgCAttttcaacattctgtttcagaaatgatcaatcatatacagcattggagcaagtgatatgatgtacttc-acgtacccatcacctgacttccaacagtattttgtcaGGGCATATTATGATCACTGCCATGAAGACAAATGCTTAGGTAGGTATTACCACTTTCTCTGGACATTGTTTCTTGGCAAAATGCCATTTGAAAATGATAGAACTTg i colAng1.NW_012111697v1 M 1642 C 0 s canFam3.chr1 4664130 264 - 122678785 ---------AA-AAAAGAAGTAATGAAAGGGATAAATTCAGGTGCTT----CTG--TGCATGTTTC----TGTGCAttttaaactttttattatggatatgttcagtcatacccaacaatagagcaaatgatatgatagatctc-gtatatccatcatccagcttcCAGCAGTGTTTTGTCAGGAGA---AATGATCACTGCCATGAAGACAACTCCTTAAATGGATGTCACCACATTTTCTGTGTATTATTTCATGGCAAAATCCCATTCGAAAATGATAGAACTTG i canFam3.chr1 C 0 I 10 s dasNov3.JH563638 401604 240 + 643850 -----------------------------------ATCCAGGTGC-----------TGTGTGCTCATGTATAGAGAttttaaactttatattatagaaatggtcaagcatattcaacagtagagcaagtagtatggtaaatctctgtgtcctcatcacctgacttccaacagaattttgccaGGGGACATTATGAT--CTGCTACAGAGGCGGCTTCTCAAATTGGTGTCATCATTTTCTTTGCATATTATTTCTTAGTGAAATCTCATTTGAGTTTTATAGAACTTG i dasNov3.JH563638 C 0 I 434 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C a score=1635101.000000 s hg38.chr19_GL383574v1_alt 140254 280 + 155864 ggcaggcatgatggctcatggctgtaatcccaacactttgggaggctgaggcaggcggatcactttgaggtcaggagtttgagaccagcctggccaacgtggtgacaccctgtctctactaagaatacaaaaattaatcaggcgtggtatcgggcacctgtaatgccagctactcaggaggctgaggcatgagaattgcctgaacccaggaggtagaggttgcagtgagccgagatcgcaccactgcactccagcctgggcaacagagtgagacttcatc s panTro5.chr19 36207581 280 + 61309027 ggcaggcatgatggctcatggctgtaatcccaacactttgggaggccgaggcgggcggatcactttgaggtcaggagtttgagaccagcctggccaacgtggtgacaccctgtctctactaagaatacaaaaattaatcaggcttggtgtcgggcacctgtaatgccagctactcaggaggctgaggcatgagaattgcctgaacccaggaggcagaggttgcagtgagccgagatcgcaccactgcactccagcctgggcaacagagtgagacttcatc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951483 280 + 64411610 ggcaggcatgatggctcatggctgtaatcccaacactttgggaggccgaggcgggcggatcactttgaggtcaggagtttgagaccagcctggccaacgtggtgacaccctgtctctactaagaatacaaaaattaatcaggcttggtatcgggcacctgtaatgccagctactcaggaggctgaggcatgagaattgcctgaacccgggaggcagaggttgcagtgagccgagatcgcaccactgcactccagcctgggcaacagagtgagacttcatc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363462 280 - 8369475 ggcaggcatggtggctcatggctgtaatcccaacactctgggaggccgaggagggcggatcactttgaggtcaggagtttgagaccagccaggccaacgtggtgacaccctgtctctactaagaatacaaaaattagtcaggcgtggtatcgggcacctgtaatgccagctactcaggaggctgaggcatgagaattgcctgaacccaggaggcagaggttgcagtgagccgagatcgcaccactgcactccagcctgggcaacagagtgagacttcatc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63960497 280 - 106955855 ggcaggcatgatggctcattgctgtaatactaacactttgggaggccgaggcgggcagatcactttgaggtcaggagtttgagaccagcctggccaacgtggtgacaccctgtctctactaagaatacaaaaattagccaggcgtggtattgggcacctgtaatgccagctactcaggaggctgaggcatgagaattgcctgaacccaggaggcggaggttgtggtgagccgagatggcaccactgcactctagcctaggcaacagagtgagacttcatc i nomLeu3.chr10 C 0 I 197 s rheMac8.chr19 30276656 280 + 53671032 ggcaggcatgatggctcatggctgtaatcccgacactttgggaggccgaggcgggcagctcactttgaggtcaggagtttgagaccagcctggccaacatagtgacaccctgtctctactaagaatacaaaaattagccaggcatggtatcaggcacctgtaatcccagctactcaggagactgaggcaggagaattgcttgaacccaggaggcagaagttgtagtgagccgagatcgcaccactgcactctagcctgggcaacagagcgagacttcatc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34730929 280 + 59248254 ggcaggcatgatggctcatggctgtaatcccgacactttgggaggccgaggcgggcagctcactttgaggtcaggagtttgagaccagcctggccaacatagtgacaccctgtctctactaagaatacaaaaattagccaggcatggtatcaggcacctgtaatcccagctactcaggagactgaggcaggagaattgcttgaacccaggaggtagaagttgtagtgagccgagatcgcaccactgcactccagcctgggcaacagagcgagacttcatc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4604754 280 - 13342542 ggcaggcataatggctcatggctgtaatcccgacactttgggaggccgaggcgggcagctcactttgaggtcaggagtttgagaccagcctggccaacatagtgacaccctgtctctactaagaatacaaaaattagccaggcatggtatcaggcacctgtaatcccagctactcaggagactgaggcaggagaattgcttgaacccaggaggtagaagttgtagtgagccgagatcccaccactgcactccagcctgggcaacagagcgagacttcatc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5527817 280 + 7714307 ggcaggcatgatggctcatggctgtaatcctgacactttgggaggccgaggcgggcagctcactttgaggtcaggagtttgagaccagcctggccaacatagtgacaccctgtctctactaagaatacaaaaattagccaggcatggtatcaggcacctgtaatcccagctactcaggagactgaggcatgagaattgcttgaacccaggaggtagaagttgtagtgagccgagatggcaccactgcactccagcctgggcaacagagcgagacttcatc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29330952 280 + 50890351 ggcaggcatgatggctcatggctgtaatcccgacactttgggaggccgaggcaggcagctcactttgaggtcaggagtttgagaccagcctggccaacatagtgacaccctgtctctactaagaatacaaaaattagccaggcatggtatcgggcacctgtaatcccagctactcaggagactgaggcatgagaattgcttgaacccaggaggtagaagttgtagtgagccgagatcgtaccactgcactccagcctgggcaacagagcgagacttcatc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 963551 280 - 2385121 ggcaggcatgatggctcatggctgtaatcccgacactttgggaggccgaggcgggcagctcactttgaggtcaggagtttgagaccagcctggccaacatagtgacaccctgtctctactaagaatacaaaaattagccaggcatggtatcaggcacctgtaatcccagctactcaggagactgaggcatgagaattgcttgaacccaggaggtagaagttgtagtgagccgagatcgcaccactgcactccagcctgggcaacagagcgagacttcatc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2405763 280 + 4274983 ggcaggcatgatggctcatggctgtaatcccgacactttgggaggccgaggcaggcagctcactttgaggtcaggagtttgagaacagcctgaccaacacagtgacaccctgtctctactaagagtacaaaaattaaccaggcatggtatcgggcacctgtaatcccagctgctcagaaggctgaggcatgagaattgcttgaacccaggaggtggaagttgtagtgagccgagatcgcacctctgcactccagcctgggcaacagagcgagacttcatc i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 401844 434 + 643850 I e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664394 10 - 122678785 I e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C a score=210540.000000 s hg38.chr19_GL383574v1_alt 140534 38 + 155864 tcaaaaaaagaaaaaagaaaaTGATAGATCTTGAATGT s panTro5.chr19 36207861 38 + 61309027 tcaaaaaaagaaaaaagaaaaTGATAGATCTTGAATGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951763 38 + 64411610 tcaaaaaaagaaaaaagaaaaTGATAGATCTTGAATGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363742 38 - 8369475 tcaaaaaaagaaaaaagaaaaTGATAGATCTTGAATGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63960974 38 - 106955855 tcaaaaaaagaaaaaataagaTGATGGATCTTGAATGT i nomLeu3.chr10 I 197 C 0 s rheMac8.chr19 30276936 38 + 53671032 tcaaaaaaagaaaaaagaaaaTGATAGAACTTGAATGT i rheMac8.chr19 C 0 I 202 s macFas5.chr19 34731209 36 + 59248254 tcaaaaaaagaaaaaagaaaaTGATAGAACTTGAAT-- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4605034 38 - 13342542 tcaaaaaaagaaaaaagaaaaTGATAGAACTTGAATGT i macNem1.NW_012011689v1 C 0 I 202 s cerAty1.NW_012005268v1 5528097 38 + 7714307 tcaaaaaaagaaaaaagaaaaTGATAGAACTTGAATGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29331232 38 + 50890351 tcaaaaaaagaaaaaagaaaaTGATAGAACTTGAATGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 963831 38 - 2385121 tcaaaaaaagaaaaaagaaaaTGATAGAACTTGAATGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2406043 38 + 4274983 tcaaaaaaagaaaaaagaaaaTAATAGAACTTGAATAT i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 401844 434 + 643850 I e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664394 10 - 122678785 I e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C a score=81904.000000 s hg38.chr19_GL383574v1_alt 140572 23 + 155864 ATTTCAGTTCCATGACCTTTTTT s panTro5.chr19 36207899 23 + 61309027 ATTTCAGTTCCATGACCTTTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951801 23 + 64411610 ATTTCAGTTCCATGACCTTTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363780 23 - 8369475 ATTTCAGTTCCATGACCTTTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63961012 23 - 106955855 ATTTCAGTTCCATGACCTTTTTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34731245 17 + 59248254 ------GTTCCATGACtttttta i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5528135 23 + 7714307 ATTTCAGTTCCATGACtttttta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29331270 23 + 50890351 ATTTCAGTTCCATGACtttttta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 963869 23 - 2385121 ATTTCAGTTCCATGACtttttta i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2406081 23 + 4274983 ATTTCAGTTCCATGACttttttt i colAng1.NW_012111697v1 C 0 I 1556 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 401844 434 + 643850 I e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664394 10 - 122678785 I e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e macNem1.NW_012011689v1 4605072 202 - 13342542 I e rheMac8.chr19 30276974 202 + 53671032 I a score=-432.000000 s hg38.chr19_GL383574v1_alt 140595 4 + 155864 -TTT-T s panTro5.chr19 36207922 3 + 61309027 -TCT-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951824 3 + 64411610 -TCT-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363803 5 - 8369475 -TTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63961035 4 - 106955855 -TTT-T i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34731262 4 + 59248254 tttt-- i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5528158 4 + 7714307 tttt-- i cerAty1.NW_012005268v1 C 0 I 187 s chlSab2.chr6 29331293 4 + 50890351 tttt-- i chlSab2.chr6 C 0 I 204 s manLeu1.NW_012102454v1 963892 4 - 2385121 tttt-- i manLeu1.NW_012102454v1 C 0 I 187 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 401844 434 + 643850 I e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664394 10 - 122678785 I e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I e macNem1.NW_012011689v1 4605072 202 - 13342542 I e rheMac8.chr19 30276974 202 + 53671032 I a score=820.000000 s hg38.chr19_GL383574v1_alt 140599 3 + 155864 GTT- s panTro5.chr19 36207925 3 + 61309027 GTT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951827 3 + 64411610 GTT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363808 3 - 8369475 GTT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63961039 3 - 106955855 GTC- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34731266 3 + 59248254 -ttt i macFas5.chr19 C 0 I 172 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 401844 434 + 643850 I e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e chlSab2.chr6 29331297 204 + 50890351 I e canFam3.chr1 4664394 10 - 122678785 I e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I e manLeu1.NW_012102454v1 963896 187 - 2385121 I e cerAty1.NW_012005268v1 5528162 187 + 7714307 I e macNem1.NW_012011689v1 4605072 202 - 13342542 I e rheMac8.chr19 30276974 202 + 53671032 I a score=910.000000 s hg38.chr19_GL383574v1_alt 140602 1 + 155864 T s panTro5.chr19 36207928 1 + 61309027 T i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951830 1 + 64411610 T i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363811 1 - 8369475 T i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63961042 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 401844 434 + 643850 I e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e chlSab2.chr6 29331297 204 + 50890351 I e canFam3.chr1 4664394 10 - 122678785 I e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I e manLeu1.NW_012102454v1 963896 187 - 2385121 I e cerAty1.NW_012005268v1 5528162 187 + 7714307 I e macNem1.NW_012011689v1 4605072 202 - 13342542 I e macFas5.chr19 34731269 172 + 59248254 I e rheMac8.chr19 30276974 202 + 53671032 I a score=12318.000000 s hg38.chr19_GL383574v1_alt 140603 8 + 155864 gtttcatc s panTro5.chr19 36207929 8 + 61309027 gtttcatc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951831 8 + 64411610 gtttcatc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363812 8 - 8369475 gtttcatc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63961043 8 - 106955855 gtttcatg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34731441 8 + 59248254 gtttcaca i macFas5.chr19 I 172 C 0 s chlSab2.chr6 29331501 8 + 50890351 gtttcacc i chlSab2.chr6 I 204 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 401844 434 + 643850 I e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664394 10 - 122678785 I e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I e manLeu1.NW_012102454v1 963896 187 - 2385121 I e cerAty1.NW_012005268v1 5528162 187 + 7714307 I e macNem1.NW_012011689v1 4605072 202 - 13342542 I e rheMac8.chr19 30276974 202 + 53671032 I a score=31020.000000 s hg38.chr19_GL383574v1_alt 140611 6 + 155864 gtgtta s panTro5.chr19 36207937 6 + 61309027 gtgtta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951839 6 + 64411610 gtgtta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363820 6 - 8369475 gtgtta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63961051 6 - 106955855 gtgtta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30277176 6 + 53671032 gtgtta i rheMac8.chr19 I 202 C 0 s macFas5.chr19 34731449 6 + 59248254 gtgtta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4605274 6 - 13342542 gtgtta i macNem1.NW_012011689v1 I 202 C 0 s cerAty1.NW_012005268v1 5528349 6 + 7714307 gtgtta i cerAty1.NW_012005268v1 I 187 C 0 s chlSab2.chr6 29331509 6 + 50890351 gtgtta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 964083 6 - 2385121 gtgtta i manLeu1.NW_012102454v1 I 187 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 401844 434 + 643850 I e otoGar3.GL873654 5538546 2022 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664394 10 - 122678785 I e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=461369.000000 s hg38.chr19_GL383574v1_alt 140617 91 + 155864 gctaggatggtctcgatctcttgacctc--gtgatccagctgcctcggcctcccaaagtgctgggattataggcgtgagccactgtgaccagc------------- s panTro5.chr19 36207943 91 + 61309027 gctaggatggtctcgatctcctgacctc--gtgatccagccaccttggcctcccaaagtgctgggattataggcgtgagccactgtggccagc------------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951845 91 + 64411610 gctaggatggtctcgatctcctgacctc--gtgatccagccacctcggcctcccaaagtgctgggattataggcgtgagccactgtggccagc------------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363826 91 - 8369475 gctaggatggtctcgatctcctgacctc--gtgatccagccgcctcggcctcccaaagtgatgggattataggcgtgagccactgtggccagc------------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63961057 91 - 106955855 gccaggatggtctcaatctcctgacctt--gggatccggccgcctcggcctcccaaagtgctgagattacaggcgtgagccactgtgcccagc------------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30277182 91 + 53671032 gccaggatggtcttgatctcctgacctt--gtgatccagccgcctcggcctcccacagtgctgggattacaggtgtgagccactgtgcccggc------------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34731455 91 + 59248254 gccaggatggtcttgatctcctgacctt--gtgatccagccgcctcggcctcccacagtgctgggattacaggtgtgagccactgtgcccggc------------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4605280 91 - 13342542 gccaggatggtcttgatctcctgacctt--gtgatccagccgcctcggcctcccacagtgctgggattacaggtgtgagccacggtgcccggc------------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5528355 91 + 7714307 gccaggatggtcttgatctcctgaccct--gtgatccagccgcctcggcctcccacagtgctgggattacaggtgtgagccactgtgcccggc------------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29331515 91 + 50890351 gccaggatggtcttgatctcctgacctt--gtgatccagccgcctcggcctcccacagtgctgggattacaggtgtgagccactgtgcccggc------------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 964089 91 - 2385121 gccaggatggccttcatctcctgacctt--gtgatccagccgcctcagcctcccacagtgctgggattacaggtgtgagccactgtgcccggc------------- i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5540568 106 + 5549422 gctcagctggtctcaaacccatgagctcaggcgatccacctgcctccgtcttccagaattctaggattacaggtgtgagccacctcacctggccTTAATGGCGTTT i otoGar3.GL873654 I 2022 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 401844 434 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664394 10 - 122678785 I e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=98972.000000 s hg38.chr19_GL383574v1_alt 140708 21 + 155864 cAGTTCCATGACA-TTTTAAAA s panTro5.chr19 36208034 21 + 61309027 cAGTTCCATGACA-TTTTAAAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951936 21 + 64411610 cAGTTCCATGACA-TTTTTAAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363917 21 - 8369475 cAGTTCCATGACA-TTTTAAAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63961148 21 - 106955855 cAGTTCCATGACA-TTTTTAAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30277273 22 + 53671032 cAGTTCCATGACAGTTTTTAAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34731546 22 + 59248254 cAGTTCCATGACAGTTTTTAAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4605371 22 - 13342542 cAGTTCCATGACAGTTTTTAAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5528446 22 + 7714307 cAGTTCCATGACAGTTTTTAAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29331606 22 + 50890351 cAGTTCCATGACATTTTTTAAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 964180 22 - 2385121 cAGTTCCATGACAGTTTTTAAA i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5540674 22 + 5549422 CAAGTCAATGATACTTCCTTAA i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4664404 20 - 122678785 CAATCCCATGATA--TTTCCTT i canFam3.chr1 I 10 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 401844 434 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=1147261.000000 s hg38.chr19_GL383574v1_alt 140729 192 + 155864 AAATTCAACAC--TATCTAGTTTT-GATTACAACAAAGATCTGCACAGGA--AC-----ACCAG-------ATCTGTTAAGAATTAGCGAAAACTAGTTTACATGTTTTGAA------TGTTTTTT-CTCTCTGCTTGGGTAGGAACCCCAGGCGTGACTGTGATACTTGAGCAGTCTTGTTAGAAGCAATTATGTTACAAACAGAACTTTTCATT s panTro5.chr19 36208055 193 + 61309027 AAATTCAACAC--TATCTAGTTTT-GATTACAACAAAGATCTGCACAGGA--AC-----ACCAG-------ATCTGTTAAGAATTAGCGAAAACCAGTTTTCATGTTTTGAA------TGTTTTTTTCTCTCTGCTTGGATAGGAACCCCAGGCGTGACTGTGATACTTGAGCAGTCTTGTTAGAAGCAATTATGTTACAAACAGAACTTTTCATT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39951957 192 + 64411610 AAATTCAACAC--TATCTAGTTTT-GATTACAACAAAGATCTGCACAGGA--AC-----ACCAG-------ATCTGTTAAGAATTAGCGAAAACCAGTTTTCATGTTTTGAA------TGTTTTTT-CTCTCTGCTTGGATAGGAACCCCAGGCGTGACTGTGATACTTGAGCAGTCTTGTTAGAAGCAATTATGTTACAAACAGAACTTTTCATT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6363938 192 - 8369475 AAAATCAGCAC--TATCTAGTTTT-GATTACAACAAAGATCTGCACAGGA--AC-----ACCAG-------ATCTGTTAAGAATTAGCGAAAACCAGTTTTCATGTTTTGAA------TGTTTTTT-CTCTCTGCTTGGGTAGGAACCCCAGGCGTGACTGTGATACTTGAGCAGTCTTGTTAGAAGCAATTATGTTACAAACAGAACTTTTCATT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63961169 192 - 106955855 AAATTCAACAC----TCTAGTTTT-GATTACAACAAAGATCTGCACAGGAACAC-----ACCAG-------ATCTGTTAAGAATTAGCCAAAACCAGTTTTCATGTTTTGAA------TGTTTTTT-CTCTCTTCTTGGGTAGGAACCCCAGGCATGACTGTGATACTTGAGCAGTCTTGTTAGAAGCAATTATGTTACAAACAGAACTTTTCATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30277295 192 + 53671032 AAAGTAAACAC--TATCTAGTTTT-GATTACAACAAAGATCTGCACAAGA--AC-----ACCAA-------ATCTGTTAAGAATTATCGAAAACCAATTTTCATGTTTTAAA------TGTTTTTT-CTCTCTGCTTGGTTAGGAACTCCAGGCATGATTGTGTTACTTGAGCAGTCTCATTAGAAGCAATTATGTGACAAACAGAACTTTTCATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34731568 192 + 59248254 AAAGTCAACAC--TATCTAGTTTT-GATTACAACAAAGATCTGCACAAGA--AC-----ACCAA-------ATCTGTTAAGAATTATCGAAAACCAATTTTCATGTTTTAAA------TGTTTTTT-CTCTCTGCTTGGTTAGGAACTCCAGGCATGATTGTGTTACTTGAGCAGTCTCATTAGAAGCAATTATGTGACAAACAGAACTTTTCATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4605393 192 - 13342542 AAAGTCAACAC--TATCTAGTTTT-GATTACAACAAAGATCTGCACAAGA--AC-----ACCAA-------ATCTGTTAAGAATTATCAAAAACCAATTTTCATGTTTTAAA------TGTTTTTT-CTCTCTGCTTGGTTAGGAACTCCAGGCATGATTGTGTTACTTGAGCAGTCTCATTAGAAGCAATTATGTGACAAACAGAACTTTTTATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5528468 192 + 7714307 AAAGTCAACAC--TATCTAGTTTT-GATTACAACAAAGATCTGCACAAGA--AC-----ACCAA-------ATCTGTTAAGAATTAGCGAAAACCAGTTTTCATGTTTTAAA------TGTTTTTT-CTCTCTGCTTGGTTAGGAACCCCAGGCATGATTGTGTTACTTGAGCAGTCTCATTAGAAGCAATTATGTGACAAACAGAACTTTTCATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29331628 192 + 50890351 AAAGTCAACAC--TATCTAGTTTT-GATTACAACAAAGATCTACACAAGA--AC-----ACCAA-------ATCTGTTAAGAATTAGAGAAAACCAGTTTTCATGTTTTAAA------TGTTTTTT-CTCTCTGCTTGGTTAGGAACCCCAGGCATGATTGTGTTACTTGAGCAGTCTCATTAGAAGCAATTATGTTACAAACAGAACTTTTCATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 964202 192 - 2385121 AAAGTCAACAC--TATCTAGTTTT-GATTACAACAAAGATCTGCACAAGA--AC-----ACCAA-------ATCTGTTAAGAATTAGCGAAAACCAGTTTTCATGTTTTAAA------TGTTTTTT-CTCTCTGCTTGGTTAGGAACCCCAGGCATGATTGTGTTACTTGAGCAGTCTCATTAGAAGCAATTATGTGACAAACAGAACTTTTCATT i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5540696 191 + 5549422 AAG--CAAAAT--TGTCTAGTTTT-GATTATAGCAAACATCAGCAAAGGA--AC-----ACTAG-------ATCAGTTAAGAATATGTAAAAACTGGTTTTCTTCTTTTTAG-GAGCTTGTTTTTT--TCTCTGCCTGGGTA-GAATGCCAGGCTTAACTGTGCCACTTACGGGGTTTTGT--GTAGCAGTTATGTTACAAACAGCATATTTCAGT i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4664424 195 - 122678785 GACTTCAACACAGTATCTAGTTTT--ATTACACCAAAGATCAGCACAGGA--AC----AAACAG-------ATCTGTTAAGAATAAGTAAAAATCATTTTTCATCTTCTTAAGGGGTTTGTGTGTT-CTCTCTGCCTGGAGAAGAACCCCA--CTTGACCATGGCACTTAAGTGGTCTTGTTA-AAGCACTTATGATACATACAGG--TTTTCACT i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 402278 199 + 643850 aaatccatttc--ccTCTAGTTTTTGATGACAGCAAA-ATCAACAAAGGA--TCAAGTAAACAAGGATTTTACTTGTTAAAAATCAGTAAAAATTAATTTTCATCTTTTTAAGGGTCTTGTTTGTT-ATCTCTGCCTGGAGAAGAACCACGGGCTTGACTGCGGGACTTAAGTAGTCCTCTTAGAAGCACATATGATACAAATAG----------- i dasNov3.JH563638 I 434 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=225155.000000 s hg38.chr19_GL383574v1_alt 140921 38 + 155864 GATCTGTGTAA-CCAGCCCCTTGGTTCTCAGAAAAAGAG s panTro5.chr19 36208248 38 + 61309027 GAACTGTGTAA-CCAgccccttggttctcagaaaaagag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39952149 38 + 64411610 GAACTGTGTAG-CCAGCCCCTTGGTTCTCAGAAAAAGAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6364130 38 - 8369475 GAACTGTGTAA-CCAgccccttggttctcagaaaaagag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63961361 38 - 106955855 GAACTGTCTAA-ACAGCCCCTTGGTTCTCAGAAAAAGAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30277487 38 + 53671032 GAACTGTCTAA-CCAGCCCCTTGGTTCTCAAAAAATGAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34731760 38 + 59248254 GAACTGTCTAA-CCAGCCCCTTGGTTCTCAGAAAATGAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4605585 38 - 13342542 GAACTGTCTAA-CCAGCCCCTTGGTTCTCAGAAAATGAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5528660 38 + 7714307 GAACTGTCTAA-CCAGCCCCTTGGTTCTCAGAAAATGAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29331820 38 + 50890351 GAACTGTCTAA-CCAGCCCCTTGGTTCTCAGAAAATGAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 964394 38 - 2385121 GAACTGTCTAA-CCAGCCCCTTGGTTCTCAGAAAATGAG i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5540887 38 + 5549422 GAATTGTTCAA-CCAGTCCCTTGGTTCTCAGAAATAGAG i otoGar3.GL873654 C 0 C 0 s dasNov3.JH563638 402477 36 + 643850 ---TTGTCTAACCCAACTTTTCGGTTCTTAGAAATAAAG i dasNov3.JH563638 C 0 I 33 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=17270.000000 s hg38.chr19_GL383574v1_alt 140959 3 + 155864 TTG s panTro5.chr19 36208286 3 + 61309027 ttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39952187 3 + 64411610 TTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6364168 3 - 8369475 ttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63961399 3 - 106955855 CTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30277525 3 + 53671032 TTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34731798 3 + 59248254 TTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4605623 3 - 13342542 TTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5528698 3 + 7714307 TTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29331858 3 + 50890351 TTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 964432 3 - 2385121 TTG i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5540925 3 + 5549422 TTG i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402513 33 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=645191.000000 s hg38.chr19_GL383574v1_alt 140962 141 + 155864 TggccaggcacagtggcacacgcctgtaatcccagcactctggaaagccgagacaggtggattgcttgagcttaacagccagagactggtgaaaccctgtttcaaaacaaacaaaCAAACAAAACAAAACAAAAAAACTTA s panTro5.chr19 36208289 140 + 61309027 tggccaggcacagtggcacacgcttgtaatcccagcactctggaaagccaaggcaggtggattgcttgagcttaacagccagagactggtgaaaccctgtttcaaaacaaacaaaCAAACAAAACAAAACAAAAAA-CTTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39952190 141 + 64411610 TggccaggcacagtggcacacgcctgtaatcccagcactctggaaagccgaggcaggtggattgcttgagcttaacagccagagactggtgaaaccctttttcaaaacaaacaaaCAAACAAAACAAAACAAAAAAACTTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6364171 141 - 8369475 tgaccaggcacagtggcacacgcctgtaatcctagcactctggaaagccgaggcaggtggattgcttgagcttaacagccagagactggtgaaaccctgtttcaaaacaaacaaaCAAACAAAACAAAACAAAAAAACTTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63961402 135 - 106955855 Tggccaggcacagtggcacacgcctctaatcccagtaccctggaaagccgaggcaggtagattgcttgagcttaagagcccgagactggtgaaaccctgtttca----aaacaaacaaacaaaaCAAAACAAAAA--CTTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30277528 138 + 53671032 Tggccgggcacagtggcacacacctgtaatcccagcactctggaaagccgaggcaggtggattgcttgagctcaagagcccgagactggtgaaaccctgtttcaaaacaaaca---agacaaaaCAAAACAAAACAACTTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34731801 138 + 59248254 Tggccgggcacagtggcacacatctgtaatcccagcactctggaaagccgaggcaggtggattgcttgagctcaagagcccgagactggtgaaaccctgtttcaaaacaaaca---agacaaaaCAAAACAAAAAAACTTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4605626 138 - 13342542 Tggccaggcacagtggcacacacctgtaatcccagcactctggaaagccgaggcaggtggattgcttgagctcaagagcccgagactggtgaaaccctgtttcaaaacaaaca---agacaaaaCAAAACAAAAAAACTTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5528701 138 + 7714307 Tggccgggcacagtggcacacacctgtaatcccagcactctggaaagccgaggcaggtggattgcttgagctcaagagcccgagactggtgaaaccctgtttcaaaacaaaca---agacaaaaCAAAACAAAAAAACTTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29331861 138 + 50890351 Tggccaggcacagtggcacacacctgtaatcccagcactctggaaagccgaggcaggtggattgcttgagctcaagagcctgagactggtgaaaccctgtttcaaaacaaaca---agacaaaaCAAAACAAAAAAACTTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 964435 138 - 2385121 Tggccgggcacagtggcacacacctgtaatcccagcactctggaaagccgaggcaggtggattgcttgagctcaagagcccgagactggtgaaaccctgtttcaaaacaaaca---agacaaaaCAAAACAAAAAAACTTA i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402513 33 + 643850 I e otoGar3.GL873654 5540928 0 + 5549422 C e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=1036510.000000 s hg38.chr19_GL383574v1_alt 141103 217 + 155864 TTTATCACTTTGGAAGGGAGGTGCCTTTCTGTATTA---TTATTAttttttgagacggagtctcgctctgttgcccaggctggagtgcagtggcatgatttcggctcactgcaagctctgcctcccgggttcatgccattctcctgcctcagtctcccgagtagctgggactaca--ggtgcatcccaccacacctggctaattttttgtatttttagtaga s panTro5.chr19 36208429 215 + 61309027 TTTATCACTTTGGAAGGGAGGTGCCTTTCTGTATTA---TTATTAttttttgagacggagtctcgct--gttgcccaggctggagtgcagtggcatgatctcggctcactgcaagctctgcctcccgggttcatgccattctcctgcctcagtctcccgagtagctgggactaca--ggtgcatcccaccacacctggctaattttttgtatttttagtaga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39952331 217 + 64411610 TTTATCACTTTGGAAGGGAGGTGCCTTTCTGTATTA---TTATTAttttttgagacggagtctcgctctgttgcccaggctggagtgcagtggcatgatctcggctcactgcaagctctgcctcccgggttcatgccattctcctgcttcagtctcccgagtagctgggactaca--ggtgcatcccaccacacctggctaattttttgtatttttagtaga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6364312 217 - 8369475 TTTATCACTTTGGAAGGGAGGTGGCTTTCTGTATTA---TTATTAttttttgagacggagtctcgctctgttgcccaggctggagtgcagtggcatgatctcggctcactgcaagctctgcctcctgggttcatgccattctcctgcctcagtctcccgagtagctgggactaca--ggtgcatcccaccacacctggctaattttttgtatttttagtaga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63961537 217 - 106955855 TTTGTCACTTTGGAGGGGAGGTGCCTTTCTGTATTA---TTATTAttttttgagacggagtccctctctgttgcccaggctggagtacagtggcatgatctcggctcactgcaagctctgcctcccgggttcatgccattctcctgcctcagtctcccgagtagctgggactaca--ggtgcatcccaccacacctggctaattttttgtatttttagtaga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30277666 217 + 53671032 TTTATCACTTTGGAGGGGAGGTGCCTTTCTGTATTA---TCATTATAttttgagacggagtctcgctctgtcgtccaggctggagtgcagtggcacaatctcgtctcactgcaagctccgcttcccgggttcacgccattctcctgcttcagcctttctagtagctgggactaca--ggtgcccaccagcacacctggctaatttattatatttttagtaga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34731939 217 + 59248254 TTTATCACTTTGGAGGGGAGGTGCCTTTCTGTATTA---TCATTATAttttgagatggagtctcgctctgtcgtccaggctggagtgcagtggcacaatctcgtctcactgcaagctccgcttcccgggttcacgccattcttctgcttcagcctttctagtagctgggactaca--ggtgcccaccagcacacctggctaatttattatatttttagtaga i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4605764 217 - 13342542 TTTATCACTTTGGAGGGGAGGTGCCTTTCTGTATTA---TCATTATAttttgagacggagtctcgctctgtcgtccaggctggagtgcagtggcacaatctcgtctcactgcaagctccgcttcccgggttcacgccattctcctgcttcagcctttctagtagctgggactaca--ggtgcccaccagcacacctggctaatttattatatttttagtaga i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5528839 219 + 7714307 TTTATCACTTTGGAGGGGAGGTGCCTTTCTGTATTA---TCATTACAttttgagacagaatctcgctctgttgtccaggctagagtgcagtggtacaatctcgtctcactgcaagctccgcttcccgggttcacgccattctcctgcttcagcctttctagtagctgggactacaggggtgcccaccagcacacctgtctaatttattatatttttagtaga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29331999 214 + 50890351 TTTATCACTTTGGAGGGGAGGTGACTTTCTGTATTA---TCATTATAttttgagacggagtctcactctgttgtccaggctggagtgcagtggcacaatctcgtctcactgcaagcttcgcttcccgggttcacgccatt---ctgcttcagcctttctagtaactgggactaca--ggtgcctaccagcacacttggctaatttattatatttttagcaga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 964573 217 - 2385121 TTTATCACTTTGGAGGGGAGGTGCCTTTCTGTATTA---TCATTACAttttgagatggaatctcgctctgttgtccaggctagagtgcagtggtacaatctcgtctcactgcaagctccgcttcccgggttcacgccattctcctgcttcagcctttctagtagctgggactaca--ggtgcccaccagcacacctggctaatttattatatttttagtaga i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5540928 176 + 5549422 TTTATCACTTC--AAGGGGAGTGCCTTTCTGTATTCTTTTTTTTATTTTTTGAGACAGAGTCTC-----------------------------TATCAT---------CAgcaacctcaaactcttgggctcaagcaattctcttgcctcagtctcctgagcagctaggacta----ggcacccagctcaatgcccaactacctt-ttcta-ctttaacaga i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402513 33 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=22015.000000 s hg38.chr19_GL383574v1_alt 141320 12 + 155864 gacagggtttca s panTro5.chr19 36208644 12 + 61309027 gacagggtttca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39952548 12 + 64411610 gacagggtttca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6364529 12 - 8369475 gacagggtttca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63961754 12 - 106955855 gacagagtttca i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29332213 12 + 50890351 gacggggtttca i chlSab2.chr6 C 0 C 0 s otoGar3.GL873654 5541104 12 + 5549422 gacagagtttca i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402513 33 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I e manLeu1.NW_012102454v1 964790 0 - 2385121 C e cerAty1.NW_012005268v1 5529058 0 + 7714307 C e macNem1.NW_012011689v1 4605981 0 - 13342542 C e macFas5.chr19 34732156 0 + 59248254 C e rheMac8.chr19 30277883 0 + 53671032 C a score=1500.000000 s hg38.chr19_GL383574v1_alt 141332 1 + 155864 c s panTro5.chr19 36208656 1 + 61309027 c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39952560 1 + 64411610 c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6364541 1 - 8369475 c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63961766 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29332225 1 + 50890351 c i chlSab2.chr6 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402513 33 + 643850 I e otoGar3.GL873654 5541116 0 + 5549422 C e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I e manLeu1.NW_012102454v1 964790 0 - 2385121 C e cerAty1.NW_012005268v1 5529058 0 + 7714307 C e macNem1.NW_012011689v1 4605981 0 - 13342542 C e macFas5.chr19 34732156 0 + 59248254 C e rheMac8.chr19 30277883 0 + 53671032 C a score=83288.000000 s hg38.chr19_GL383574v1_alt 141333 96 + 155864 cgtgttagccaggatggtctcgatctcctgacctcttgatctgtccactttggcctcccaaagtgctgggattacaggtgtgagccaccgtgccca s panTro5.chr19 36208657 96 + 61309027 cgtgttagccaggatggtctcgatctcctgacctcgtgatctgtccactttggcctcccaaagtgctgggattacaggtgtgagccaccgcgccca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39952561 96 + 64411610 cgtgttagccaggatggtctcgatctcctgaccttgtgatctgtccactttggcctcccaaagtgctgggattacaggtgtgagccaccgcgccca i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63961767 96 - 106955855 cgtgttagccaggatggtctcgatctcctgacctcgtgctctgtccaccttggcctcccaaagtgctaggattacaggtgtgagccaccacgccca i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 29332226 96 + 50890351 cgtgttagccaggatggtcttgatctcctgacctcgagatctggccgctgtggcctcccaaagtgctgggattacaggcgtgagcctccgcgccca i chlSab2.chr6 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402513 33 + 643850 I e otoGar3.GL873654 5541116 0 + 5549422 C e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I e manLeu1.NW_012102454v1 964790 0 - 2385121 C e cerAty1.NW_012005268v1 5529058 0 + 7714307 C e macNem1.NW_012011689v1 4605981 0 - 13342542 C e macFas5.chr19 34732156 0 + 59248254 C e rheMac8.chr19 30277883 0 + 53671032 C e gorGor5.CYUI01015150v1 6364542 0 - 8369475 C a score=22876.000000 s hg38.chr19_GL383574v1_alt 141429 64 + 155864 gccAACCTTTCTGTAttcttttttttttttttt---gagacggagtctggctc----------------------------------------------------------------------------------------tgtcgcccaggctg s panTro5.chr19 36208753 67 + 61309027 gccAACCTTTCTGTAttcttttttttttttttttttgagacggagtctggctc----------------------------------------------------------------------------------------tgtcgcccaggctg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39952657 152 + 64411610 gccAACCTTTCTGTAttctcttttttttttttt---gagacggagtctggctctgtcgcccaggcaggagaatggcgtgaacccagggggcggagcttgcagtgagccgagattgtgctacNNNNNNNNNNNNNNNNNNNNtgtcgcccaggctg i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63961863 62 - 106955855 gccAACCTTTCTGTGtttttttttttttttt-----gagatggagtctggctc----------------------------------------------------------------------------------------tgtcgcccaggctg i nomLeu3.chr10 C 0 M 1153 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402513 33 + 643850 I e otoGar3.GL873654 5541116 0 + 5549422 C e mm10.chr7 111151645 2982 - 145441459 I e chlSab2.chr6 29332322 0 + 50890351 C e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I e manLeu1.NW_012102454v1 964790 0 - 2385121 C e cerAty1.NW_012005268v1 5529058 0 + 7714307 C e macNem1.NW_012011689v1 4605981 0 - 13342542 C e macFas5.chr19 34732156 0 + 59248254 C e rheMac8.chr19 30277883 0 + 53671032 C e gorGor5.CYUI01015150v1 6364542 0 - 8369475 C a score=23971.000000 s hg38.chr19_GL383574v1_alt 141493 86 + 155864 gagtgcagtggcaccgggatcacgccattctcctgcctcagccttcccagtagctgggactacaggcgcccgctaccacgccgggc s panTro5.chr19 36208820 86 + 61309027 gagtgcagtggcgccgggatcacgccattctcctgcctcagccttcccagtagctgggacgacaggcgcccgctaccacgcctggc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39952809 86 + 64411610 gagtgcagtggcgccgggatcacgccattctcctgcctcagccttcccagtagctgggacgacaggcgcccgctaccacgcctggc i panPan2.chr19 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402513 33 + 643850 I e otoGar3.GL873654 5541116 0 + 5549422 C e mm10.chr7 111151645 2982 - 145441459 I e chlSab2.chr6 29332322 0 + 50890351 C e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I e manLeu1.NW_012102454v1 964790 0 - 2385121 C e cerAty1.NW_012005268v1 5529058 0 + 7714307 C e macNem1.NW_012011689v1 4605981 0 - 13342542 C e macFas5.chr19 34732156 0 + 59248254 C e rheMac8.chr19 30277883 0 + 53671032 C e nomLeu3.chr10 63961925 1153 - 106955855 M e gorGor5.CYUI01015150v1 6364542 0 - 8369475 C a score=12123.000000 s hg38.chr19_GL383574v1_alt 141579 23 + 155864 taatgttctgtatttttagtagg s panTro5.chr19 36208906 23 + 61309027 taatgttctgtatttttagtagg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39952895 23 + 64411610 taatgttctgtatttttagtagg i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63963079 23 - 106955855 taatgttttgtattcttagtagg i nomLeu3.chr10 M 1153 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402513 33 + 643850 I e otoGar3.GL873654 5541116 0 + 5549422 C e mm10.chr7 111151645 2982 - 145441459 I e chlSab2.chr6 29332322 0 + 50890351 C e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I e manLeu1.NW_012102454v1 964790 0 - 2385121 C e cerAty1.NW_012005268v1 5529058 0 + 7714307 C e macNem1.NW_012011689v1 4605981 0 - 13342542 C e macFas5.chr19 34732156 0 + 59248254 C e rheMac8.chr19 30277883 0 + 53671032 C e gorGor5.CYUI01015150v1 6364542 0 - 8369475 C a score=38170.000000 s hg38.chr19_GL383574v1_alt 141602 13 + 155864 gatggggtttcat s panTro5.chr19 36208929 13 + 61309027 gacagggtttcat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39952918 13 + 64411610 gacagggtttcat i panPan2.chr19 C 0 C 0 s nomLeu3.chr10 63963102 13 - 106955855 gacggggtttcat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30277883 13 + 53671032 gatggggtttcac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34732156 13 + 59248254 gatggggtttcac i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4605981 13 - 13342542 gatggggtttcac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5529058 13 + 7714307 gatggggtttcac i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 964790 13 - 2385121 gatggggtttcac i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402513 33 + 643850 I e otoGar3.GL873654 5541116 0 + 5549422 C e mm10.chr7 111151645 2982 - 145441459 I e chlSab2.chr6 29332322 0 + 50890351 C e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I e gorGor5.CYUI01015150v1 6364542 0 - 8369475 C a score=2395.000000 s hg38.chr19_GL383574v1_alt 141615 1 + 155864 c s panTro5.chr19 36208942 1 + 61309027 t i panTro5.chr19 C 0 C 0 s panPan2.chr19 39952931 1 + 64411610 t i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6364542 1 - 8369475 c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63963115 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30277896 1 + 53671032 c i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34732169 1 + 59248254 c i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4605994 1 - 13342542 c i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5529071 1 + 7714307 c i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 964803 1 - 2385121 c i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402513 33 + 643850 I e otoGar3.GL873654 5541116 0 + 5549422 C e mm10.chr7 111151645 2982 - 145441459 I e chlSab2.chr6 29332322 0 + 50890351 C e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=372554.000000 s hg38.chr19_GL383574v1_alt 141616 95 + 155864 gtgttagccaggatggtctcgatctcctgacctcgtg--atccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgtccg s panTro5.chr19 36208943 95 + 61309027 gtgttagccaggatagtctcgatctcctgacctcgtg--atctgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgtccg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39952932 95 + 64411610 gtgttagccaggatagtctcgatctcctgacctcgtg--atccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgtccg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6364543 95 - 8369475 gtgttagccaggatggtctcgatctcctgacctcgtg--atccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgtccg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63963116 92 - 106955855 gtgttaggtaggatggtctcgatctcctggct---tg--atccgcctgccttggcctcccaaagtgctgggattacaggcgtgagccaccatgcctg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30277897 95 + 53671032 atgttagccaggatggtcttgatctcctgacctcgag--atctggccgccgtggcctcccaaagtgctgggattacaggcgtgagccaccgcacccg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34732170 95 + 59248254 atgttagccaggatggtcttgatctcctgacctcgag--atctggccgccgtggcctcccaaagtgctgggattacaggcgtgagccactgcgcccg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4605995 95 - 13342542 atgttagccaggatggtcttaatctcctgaccttgag--atctggccgccgtggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5529072 95 + 7714307 atgttagccaggatggtcttgatctcctgacctcgag--atctggctgccgtggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccg i cerAty1.NW_012005268v1 C 0 C 0 s manLeu1.NW_012102454v1 964804 95 - 2385121 atgttagccaggatggtcttgatctcctgacctcgag--atctggccgccgtggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccg i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5541116 78 + 5549422 gccttactcaggctggtcttgaattcctgagctcaagcaatccacctgccttggcctccaagagtgctagga----AAGAAT--------------- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402513 33 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e chlSab2.chr6 29332322 0 + 50890351 C e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=5500.000000 s hg38.chr19_GL383574v1_alt 141711 1 + 155864 g s panTro5.chr19 36209038 1 + 61309027 g i panTro5.chr19 C 0 C 0 s panPan2.chr19 39953027 1 + 64411610 g i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6364638 1 - 8369475 g i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63963208 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30277992 1 + 53671032 g i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34732265 1 + 59248254 g i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4606090 1 - 13342542 g i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5529167 1 + 7714307 g i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29332322 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 964899 1 - 2385121 g i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402513 33 + 643850 I e otoGar3.GL873654 5541194 0 + 5549422 C e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=943112.000000 s hg38.chr19_GL383574v1_alt 141712 158 + 155864 ccTTTGTGTATTCTTGAATACACAGGAATATTGGTGAGAATCCCTGAGTTGCAC-------------TACAGTCGG----------CATCATCAGGCG------------TCCTCATTCTTGTGGCTGTCAGCAG------ATTTTcagtggacccccagtttggctctcaaattatagcatacatcagaatcatctgg s panTro5.chr19 36209039 158 + 61309027 ccTTTGTGTATTCTTGAATGCACAGGAATATTGGTGAGAATCCCTGAGTTGCAC-------------TGCAGTCGG----------CATCATCAGGCG------------TCCTCATTCTTGTGGCTGTCAGCAG------ATTTTCAGTGGACCCCTAGTTtggctctcaaattatagcatacatcagaatcatatgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39953028 158 + 64411610 ccTTTGTGTATTCTTGAATGCACAGGAATATTGGTGAGAATCCCTGAGTTGCAC-------------TGCAGTCGG----------CATCATCAGGCG------------TCCTCATTCTTGTGGCTGTCAGCAG------ATTTTCAGTGGACCCCTAGTTtggctctcaaattatagcatacatcagaatcatatgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6364639 157 - 8369475 ccTTTGTGTATTCTTGAATGCACAGGAATATTGGTGAGAATCCCTGAGTTGCAC-------------TACAGTCAG----------CATCATCAGGCG------------TCCTCATTCTTGTGGCTGTCAGCAG------ATTTTcagtggacccc-agtttggctctcaaattatagcatacatcagaatcatctgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63963209 158 - 106955855 ccTTTCTGTATTCTTGAATACACAGGAATATTGGTGAGAATCCCTGAGTTGCAC-------------TGCAGTCGG----------CATCATCAGGTC------------ACCTCATTCTTGTGGCTCTCAGCAG------ATTTTCAGTGGACCCCCAGTTtggctctcaaattatagcatacatcagaatcatctgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30277993 158 + 53671032 tcTTTCTGTATTCTTGAATGCACAGGAATGTTGGTGAGAATCCCTGAGTTGCAC-------------TATAGTCAG----------CAGCATCATGCA------------TCCTCATTCTTGTGGCTCTCAGCAG------ATTTTCAGCGGACCCCCAGTTtggctctcaaattataggatacatcagaatcatctgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34732266 158 + 59248254 tcTTTCTGTATTCTTGAATGCACAGGAATGTTGGTGAGAATCCCTGAGTTGCAC-------------TATAGTCAG----------CATCATCAGGCA------------TCCTCATTCTTGTGGCTCTCAGCAG------ATTTTCAGCGGACCCCCAGTTtggctctcaaattataggatacatcagaatcatctgg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4606091 158 - 13342542 tcTTTCTGTATTCTTGAATGCACAGGAATGTTGGTGAGAATCCCTGAGTTGCAC-------------TATAGTCAG----------CATCATCAGGCA------------TCCTCATTCTTGTGGCTCTCAGCAG------ATTTTCAGCAGACCCCCAGTTtggctctcaaattataggatacatcagaatcatctgg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5529168 158 + 7714307 tcTTTCTGTATTCTTGAATGCACAGGAATGTTGGTGAGAATCCCTGAGTTGCAC-------------TATAGTCAG----------CATCATCAGGCA------------TCCTCATTCTTGTGGCTCTCAGCAG------ATTTTCAGCGGACCCCCAGTTtggctctcaaattataggatacatcagaatcatctgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29332323 158 + 50890351 tcTTTCTGTATTCTTGAATGCACAGGAATATTGGTGAGAATCCCTGAGTTGCAC-------------TATAGTCAG----------CATCATCAGGCA------------TCCTCATTCTTGTGGCTCTCAGCAG------ATTTTCAGTGGACCCCCAGTTtggctctcaaattataggatacatcagaatcatctgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 964900 158 - 2385121 tcTTTCTGTATTCTTGAATGCACAGGAATGTTGGTGAGAATCCCTGAGTTGCAC-------------TATAGTCAG----------CATCATCAGGCA------------TCCTGATTCTTGTGGCTCTCAGCAG------ATTTTCAGCGGACCCCCAGTTtggctctcaaattataggatacatcagaatcatctgg i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5541194 165 + 5549422 CTTTTCTGGATTCTTGAATGCACAGGAACATTGGTGAGAATACCTAAGTTGCAT-------------TAAATGCTGTGTATATAGTCATCTACAGGTG------------TCCTCATCCTTGTGGCTTTCAGCAG------GTTTTCAGC---TTTCCAGTTtggttctcagattatagcatacatcagaatcacctgg i otoGar3.GL873654 C 0 I 121 s dasNov3.JH563638 402546 189 + 643850 CTTTTCTGGATTCTTGAATGAACAGGAGTATTAATGAGAATACCTGAATTTCATTAATTAGAACTTATATAATTAG----------CATCTTTGGGTATCCATGATCATGTCCTCATCCTTATGGCTTTCAGCAGGCAGCAATTTTCAAACACTCACCAGTTAggctctcacattatagcatgtatcagaatcacctgg i dasNov3.JH563638 I 33 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=92851.000000 s hg38.chr19_GL383574v1_alt 141870 16 + 155864 ggaacttgttaaaaaa s panTro5.chr19 36209197 16 + 61309027 ggagcttgttaaaaAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39953186 16 + 64411610 ggagcttgttaaaaAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6364796 16 - 8369475 ggaacttgttaaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63963367 16 - 106955855 ggaacttgttaaaaAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30278151 16 + 53671032 ggaacttgttaaaaAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34732424 16 + 59248254 ggaacttgttaaaaAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4606249 16 - 13342542 ggaacttgttaaaaAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5529326 16 + 7714307 ggaacttgttaaaaAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29332481 16 + 50890351 ggaacttgttaaaaAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 965058 16 - 2385121 ggaacttgttaaaaAA i manLeu1.NW_012102454v1 C 0 C 0 s dasNov3.JH563638 402735 16 + 643850 ggagcttgtttaaaaa i dasNov3.JH563638 C 0 I 9590 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e otoGar3.GL873654 5541359 121 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=99015.000000 s hg38.chr19_GL383574v1_alt 141886 20 + 155864 gtgtattctccaaaaaatta s panTro5.chr19 36209213 20 + 61309027 GTATATTCTCcaaaaaatta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39953202 20 + 64411610 GTGTATTCTCcaaaaaatta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6364812 20 - 8369475 gtgtattctccaaaaaatta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63963383 20 - 106955855 GTGTATTGTCcaaaaaatta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30278167 20 + 53671032 GTGTATTCTCcaaaaaatta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34732440 20 + 59248254 GTGTATTCTCcaaaaaatta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4606265 20 - 13342542 GTGTATTCTCcaaaaaatta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5529342 20 + 7714307 GTGTATTCTCcaaaaaatta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29332497 20 + 50890351 GTGTATTCTCcaaaaaatta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 965074 20 - 2385121 GTGTATTCTCcaaaaaatta i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e otoGar3.GL873654 5541359 121 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=1571774.000000 s hg38.chr19_GL383574v1_alt 141906 326 + 155864 gtcgggcatggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccagggggcggagcttgcagtgagccgagattgcgccactgcactccagcctgggagacagagcaaga--ctgtctc---aaaaaaaaaaaaaaaaaaa---------------------GTGTAT-----------------------------------------TCTCTG--------------------------------------------------------------------CTTCTCT-----------------------------------------------------------------------------------CCCAAAGATTGATTCGTT-AGATTTGGATTGCATCCCAGTAATCAGTATTTAAATAGTCATTCCAGGAAGGGTGCTATCCTGATTCTAGTATCAGAGAAGGAAGTCCTTAAAAGCCATTGTTGGTTTTCACTGGCTGC-------------TACTAGG s panTro5.chr19 36209233 328 + 61309027 gccgggcgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccagggggcggagcttgcagtgagccgagactgtgctactgcactccagcctgggagacagagcaaga--ctgtctc---aaaaaaaaaaaaaaaaaaa-------------------aaGTGTAT-----------------------------------------TCTCTG--------------------------------------------------------------------CTTCTCT-----------------------------------------------------------------------------------CCCAAAGATTGATTCGTT-AGATTTGGATTGTATCCCAGTAATCCGTATTTAAATAGTCATTCCAGGAAGGGTGCTATCCTGATTCTAGTATCAGAGAAGGAAGTCCTTAAAAGCCATTGTTGGTTTTCACTGGCTGC-------------TACTAGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39953222 317 + 64411610 gccgggcgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccagggggcggagcttgcagtgagccgagattgtgctactgcactccagcctgggagacagagcaaga--ctgtctc---aaaaaaaaaa------------------------------GTGTAT-----------------------------------------TCTCTG--------------------------------------------------------------------CTTCTCT-----------------------------------------------------------------------------------CCCAAAGATTGATTCGTT-AGATTTGGATTGTATCCCAGTAATCCGTATTTAAATAGTCATTCCAGGAAGGGTGCTATCCTGATTCTAGTATCAGAGAAGGAAGTCCTTAAAAGCCATTGTTGGTTTTCACTGGCTGC-------------TACTAGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6364832 334 - 8369475 gccgggcgtggtggcgggcgcctgtagtcccagctactcagaaggctggggcaggagaatggcgtgaaccctgggggcagagcttgcagtgagccgagattgcgccactgcactccagcctgggagacagcgcaaga--ctgtctc---aaaaaaaaaaaaaaaaaaa-------aaaaa------aaaGTGTAT-----------------------------------------TCTCTG--------------------------------------------------------------------CTTCTCT-----------------------------------------------------------------------------------CCCAAAGATTGATTCGTT-AGATTTGGATTGTATCCCAGTAATCGGTATTTAAATAGTCATTCCAGGAAGGGTGCTATCCTGATTCTAGTATCAGAGAAGGAAGTCCTTAAAAGCCATTGTTGGTTTTCACTGGCTGC-------------TACTAGG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63963403 334 - 106955855 gccaggcatggtggtgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccagggggaggagcttgcagtgagccgagattgcgccactgcactccagcctgggagacagagcaaga--ctgtctc---aaaaaaaaaaaaaaacaaa--------aaac------aaaGTGTAT-----------------------------------------TCTCTG--------------------------------------------------------------------CTTCTCT-----------------------------------------------------------------------------------GCCAAAGATTGCTTCATTAAAATTTGGATTGTATCCCAGTAATCTGTATTTAAATAGTCATTCCAGGAAGGGTGGTATCCTGATTCTAATATCAGGGAAGGAAGTCCTTAAAAGCCATTGTTGGTTTTCACTGACTGC-------------TACTAGG i nomLeu3.chr10 C 0 I 1 s rheMac8.chr19 30278187 340 + 53671032 gcaggacgtggtggtgggcgcctgtagtcccagctactcgggagactgaggcaggagaatggtggaaacctgggggacgaagcttgcagtgagccggaattgcgccactgcactccagcctgggagacagagcaaga--ctgtctc--aaaaaaaaaaaaaaaaaaaa---------------------aaGTAT-----------------------------------------TCTCTG--------------------------------------------------------------------CTTCTTT-----------------------------------------------------------------------------------CCCAAAGATTGATTCATT-AGATTTGGATTGTGTGCCAGTAATCAGTATTTAAATAGTCATTCCAGGAAGGGTGGTATCCTGATTCTGATATCAGGGAAGGAAGTCCTTAAAAGCCATTGTTGGTTTTTACTGGCTACTGCTTTCTTTTCATACTAGG i rheMac8.chr19 C 0 I 2 s macFas5.chr19 34732460 340 + 59248254 gcaggacgtggtggtgggcgcctgtagtcccagctactcgggagactgaggcaggagaatggtggaaacctgggggacgaagcttgcagtgagccggaattgcgccactgcactccagcctgggagacagagcaaga--ctgtctc--aaaaaaaaaaaaaaaaaaaa---------------------aaGTAT-----------------------------------------TCTCTG--------------------------------------------------------------------CTTCTTT-----------------------------------------------------------------------------------CCCAAAGATTGATTCATT-AGATTTGGATTGTATGCCAGTAATCAGTATTTAAATAGTCATTCCAGGAAGGGTGGTATCCTGATTCTAATATCAGGGAAGGAAGTCCTTAAAAGCCATTGTTGGTTTTCACTGGCTACTGCTTTCTTTTCATACTAGG i macFas5.chr19 C 0 I 2 s macNem1.NW_012011689v1 4606285 337 - 13342542 gcaggacgtggtggtgggcgcctgtagtcccagctactcgggagactgaggcaggagaatggtggaaacctgggggacgaagcttgcagtgagccggaattgcgccactgcactccagcctgggagacagagcaaga--ctgtctc-----aaaaaaaaaaaaaaaaa---------------------aaGTAT-----------------------------------------TCTCTG--------------------------------------------------------------------CTTCTTT-----------------------------------------------------------------------------------CCCAAAGATTGATTCATT-AGATTTGGATTGTATGCCAGTAATCAGTATTTAAATAGTCATTCCAGGAAGGGTGGTATCCTGATTCTAATATCAGGGAAGGAAGTCCTTAAAAGCCATTGTTGGTTTTCACTGGCTACTGCTTTCTTTTCATACTAGG i macNem1.NW_012011689v1 C 0 I 2 s cerAty1.NW_012005268v1 5529362 338 + 7714307 gcaggacgtggtggtgggcgcctgtagtcccagctactcgggagactgaggcaggagaatggtggaaacctgggaaacgaagcttgtagtgagccggaattgcgccactgcactccagcctggtagacagagcaaga--ctgtctc----aaaaaaaaaaaaaaaaaa---------------------aTGTAT-----------------------------------------TCTCTG--------------------------------------------------------------------CTTCTTT-----------------------------------------------------------------------------------CCCAAAGATTGATTCATT-AGATTTGGATTGTATGCCAGTAATCAGTATTTAAATAGTCATTCCAGGAAGGGTGGTATCCTGATTCTAATATCAGGAAAGGAAGTCCTTAAAAGCCATTGCTGGTTTTCACTGGCTACTGCTTTCTTTTCATACTAGG i cerAty1.NW_012005268v1 C 0 I 2 s chlSab2.chr6 29332517 332 + 50890351 gcaggatgtggtggtgggcgcctgtagtcccagctactcgggagactgaggcaggagaatggcataaacctgggggacgaagcttgcagtgagccgaaattgcgccactgcactccagcctgggagacagagcaaga--ctgtctc----------aaaaaaaaaaaT---------------------ATGTAT-----------------------------------------TCTCTG--------------------------------------------------------------------CTTCTTT-----------------------------------------------------------------------------------CCCAAAGATTGATTCATT-AGATTTGGATTGTATGCCAGTAATCAGTATTTAAATAGTCATTCCAGGAAGGGTGGTATCCTGATTCTAATATCAGGGAAGGAAGTCCTTAAAAGCCATTGTTGGTTTTCACTGGCTACTGCTTTCTTTTCATACTAGG i chlSab2.chr6 C 0 I 2 s manLeu1.NW_012102454v1 965094 342 - 2385121 gcaggacgtggtggtgggcgcctgtagtcccagctactcgggagactgaggcaggagaatggtggaaacctgggaaacgaagcttgcagtgagccggaattgcgccactgcactccagcctggtagacagagcaaga--ctgtctcaaaaaaaaaaaaaaaaaaaaaa---------------------aTGTAT-----------------------------------------TCTCTG--------------------------------------------------------------------CTTCTTT-----------------------------------------------------------------------------------CCCAAAGATTGATTCATT-AGATTTGGATTGTATGCCAGTAATCAGTATTTAAATAGTCATTCCAGGAAGGGTGGTATCCTGATTCTAATATCAGGAAAGGAAGTCCTTAAAAGCCATTGTTGGTTTTCACTGGCTACTGCTTTCTTTTCATACTAGG i manLeu1.NW_012102454v1 C 0 I 3 s otoGar3.GL873654 5541480 549 + 5549422 gctgggtgttgtggtgggtacctgtaaccctgactacttgggaggctgagaccagagaattgcttgagcccaagagtttgaggttgctctgagct---atgacatcatgacagtctactgagggtgacaaagtgagattctgtctc---aaaaaaaaaaaaaaaagaatcacccggagacttgttaaaCATGCATATTTggctgggcaaggggtggtttacatctgtgatcctagctctctggagggccaaggtaggaagatcacttcaggccagaaagtttgagaccagcctgaggaagaacaagaccacttctctactaaaaatggaaaaattagctggctgtggtggtgtacagcctggagtcccagctactcaggaggctgaagATCAGCCTGGCCTCCAAAGATTGATTTATT-AGATTTGGAATTTATCCCAGAAATCAGTTTTTTAATAGTCATTACAGGCAGAGTGAGGTCCTGATTCTAATATCAGGGAAGGAAGGCCTTAAGA--CATTGTTGGTTTTCATTAGCTGCTGCTTTCTTTACATGCTAGT i otoGar3.GL873654 I 121 I 1106 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=143314.000000 s hg38.chr19_GL383574v1_alt 142232 29 + 155864 TTTTTttgttg-----------ttgtttgtttagagacaa s panTro5.chr19 36209561 29 + 61309027 TTTTTttgttg-----------ttgtttgtttagagacga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39953539 29 + 64411610 TTTTTttgttg-----------ttgtttgtttagagacga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6365166 29 - 8369475 TTtttttgttg-----------ttgtttgtttagagacga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63963738 29 - 106955855 TTTTTtttttg-----------ttgtttgtttagagacga i nomLeu3.chr10 I 1 C 0 s rheMac8.chr19 30278529 40 + 53671032 TTTTTTTGTTGTTGATGtttgtttgtttatttagagacga i rheMac8.chr19 I 2 C 0 s macFas5.chr19 34732802 40 + 59248254 TTTTTTTGTTGTTGATGtttgtttgtttatttagagacga i macFas5.chr19 I 2 C 0 s macNem1.NW_012011689v1 4606624 40 - 13342542 TTTTTTTGTTGTTGATGtttgtttgtttatttagagacga i macNem1.NW_012011689v1 I 2 C 0 s cerAty1.NW_012005268v1 5529702 40 + 7714307 TTTTTTTGTTGTTGATGtttgtttgtttatttagagatga i cerAty1.NW_012005268v1 I 2 C 0 s chlSab2.chr6 29332851 40 + 50890351 TTTTTTTGTTGTTGATGtttgtttgtttatttagagacga i chlSab2.chr6 I 2 C 0 s manLeu1.NW_012102454v1 965439 40 - 2385121 TTTTTTTTTTGTTGATGtttgtttgtttatttagagacga i manLeu1.NW_012102454v1 I 3 C 0 s otoGar3.GL873654 5543135 29 + 5549422 TTttttttttt-----------tttttttttttgagacag i otoGar3.GL873654 I 1106 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e colAng1.NW_012111697v1 2406104 1556 + 4274983 I a score=2523660.000000 s hg38.chr19_GL383574v1_alt 142261 414 + 155864 gatctcactattttgcccagactgga----------------------------ctcgaagtcctggactcaagtgaccctcctgctttggcctcccaaagtgctgggactgcagatgggcaccactgtgtccagc----cCTCATCCTAGTTTTACTAAGGTTGGTAGGTGGTGAAAAAAATTGCTAAAAATGTTTTCATCCTTTA-ACATG--------------CTCAGTGAGT-----GTTATGACAACCCCACATAGACTTTTACTGCCTACAGACAGATTTACTGTCACAGAGGTtgtcttagttcaggctgctttgacaaagtactatagact-gggtagcttataaacaacagaagcttatttctcacagttccaaagtctggaggtttaagatcagggtgccagcactgtcaggttctcatgagaaccctctttcgggatgcagactgctgacttacc s panTro5.chr19 36209590 414 + 61309027 gatctcactattttgcccagactgga----------------------------ctcgaagtcctggactcaagtgaccctcctgctttggcctcccaaagtgctgggactgcagatgggcaccactgtgtccagc----cCTCATCCTAGTGTTACTAAGGTTGGTAGGTGGTGAAAAAAATTGCTAAAAATGTTTTCATCCTTTA-ACATG--------------CTCAGTGAGT-----GTTATGACAACCCCACATAGACTTTTACTGCCTACAGACAGATTTACTGTCACAGAGGTtgtcttagttcaggctgctttgacaaagtactataggct-gggtagcttataaacaacagaagcttatttctcacagttccaaagtctggaggtttaagatcagggtgccagcactgtcaggttctcatgagaaccctctttcgggatgcagactgctgacttacc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39953568 414 + 64411610 gatctcactattttgcccagactgga----------------------------ctcgaagtcctggactcaagtgaccctcctgctttggcctcccaaagtgctgggactgcagatgggcaccactgtgtccagc----cCTCATCCTAGTTTTACTAAGGTTGGTAGGTGGTGAAAAAAATTGCTAAAAATGTTTTCATCCTTTA-ACATG--------------CTCAGTGAGT-----GTTATGACAACCCCACATAGACTTTTACTGCCTACAGACAGATTTACTGTCACAGAGGTtgtcttagttcaggctgctttgacaaagtactgtaggct-gggtagcttataaacaacagaagcttatttctcacagttccaaagtctggaggtttaagatcagggtgccagcactgtcaggttctcatgagaaccctctttcgggatgcagactgctgacttacc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6365195 414 - 8369475 gatgtcactattttgcccagactgga----------------------------ctcgaagtcctggactcaagtgaccctcctgctttggcctcccaaagtgctgggactgcagatgggcaccactgtgtccagc----cCTCATCCTAGTTTTACTAAGGTTGGTAGGTGGTGAAAAAAATTGCTAAAAATGTTTTCATCCTTTA-ACATG--------------CTCAGTGAGT-----GTTATGACAACCCCACATAGACTTTTACTGCCTACAGACAGATTTACTGTCACAGAGGTtgtcttagttcaggctgctttgacaaagtactatagact-gggtagcttataaacaacagaagcttatttctcacagttccaaagtctggaggtttaagatcagggtgccagcactgtcaggttctcatgagaaccctctttcaggatgcagactgttgacttacc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63963767 410 - 106955855 gatctcactattttgcccagactgga----------------------------ctcgaagtcctgggctcaagtgaccctcctgctttggcctcccaaagtgctgggactgcagatgggcaccactgtgtccagc----cCTCATCCTAATTTTACTAAGGTTGGTAGGTGGTGAAAAAAATTGCTAAAAATGTTTTCATCCTTTA-ACATG--------------CTCAGTGAGT-----GTTATGACAACCCCACGTAGACTTTTACTGCCT----ACAGATTTACTGTCACAGAGGTtgtcttagttcaggctgctttaacaaagtactatagact-gggtatattataaacaacagaagcttatttctcacagttccaaagtctggaggtttaagatcagggtgccagcactgtcaggttctcttgagaaccctctttcaggatgcagactgctgacttacc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30278569 414 + 53671032 gatctcactattttgcccagattgga----------------------------ctcaaagtcttgggctcgagtgaccctcctgctttggcctcccaaagtgctgagactgcaggtggtcaccactgagtccagc----TCTCATCCTAGTTTTACTAAGGTTGGTAGGTGGTGAAAAACATTGCTGAAATTGTTTTCATTCTTGA-ACATG--------------CTCAATGAGT-----GTTATGACAACCCCACATAGACTTTTACGGCCTACAAACAGGTTTACTGTCACAGAGGTtgtcttagttcaggctgctataacaaagtactatagact-gggtaacttataaacaacagaagcttatttctcacagttccaaagtctggaggtttaagatcagggtgccaccactgtcaggttctcatgagaaccctctttcggcatgcagagtgctgacttacc i rheMac8.chr19 C 0 I 112 s macFas5.chr19 34732842 414 + 59248254 gatctcactattttgcccagattgga----------------------------ctcaaagtcctgggctcgagtgaccctcctgctttggcctcccaaagtgctgagactgcaggtggtcaccactgagtccagc----TCTCATCCTAGTTTTACTAAGGTTGGTAGGTGGTGAAAAACATTGCTGAAATTGTTTTCATTCTTGA-ACATG--------------CTCAATGAGT-----GTTATGACAACCCCACATAGACTTTTACGGCCTACAAACAGGTTTACTGTCACAGAGGTtgtcttagttcaggctgctataacaaagtactatagact-gggtaacttataaacaacagaagcttatttctcacagttccaaagtctggaggtttaagatcagggtgccaccactgtcaggttctcatgagaaccctctttcggcatgcagagtgctgacttacc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4606664 414 - 13342542 gatctcactattttgcccagattgga----------------------------ctcaaagtcctgggctcgagtgaccctcctgctttggcctcccaaagtgctgagactgcaggtggtcaccactgagtccagc----TCTCATCGTAGTTTTACTAAGGTTGGTAGGTGGTGAAAAACATTGCTGAAATTGTTTTCATTCTTGA-ACATG--------------CTCAATGAGT-----GTTATGACAACCCCACATAGACTTTTACAGCCTACAAACAGGTTTACTGTCACAGAGGTtgtcttagttcaggctgctataacaaagtactatagact-gggtaacttataaacaacagaagcttatttctcacagttccaaagtctggaggtttaagatcagggtgccaccactgtcaggttctcatgagaaccctctttcggcatgcagagtgctgacttatc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5529742 414 + 7714307 gatctcactattttgcccagattgga----------------------------ctcaaagccctgggctcgagtgaccctcctgctttggcctcccaaagtgctgagactgcaggtggtcaccactgagtccagc----TCTCATCCTAGTTTTACTAAGGTTGGTAGGTGGTGAAAAACATTGCTGAAATTGTTTTCATTCTTGA-ACATG--------------CTCAATGAGT-----GTTATGACAACCCCACATAGACTTTTACGGCCTACAAACAGGTTTACTGTCACAGAGGTtgtcttagttcaggctgctataacaaagtactatagact-gggtaacttataaacaacagaagcttatttctcacagttccaaagtctggaggtttaagatcagggtgccaccactgtcaggttctcatgagaaccctctttcggcatgcagagtgctgacttacc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29332891 414 + 50890351 gatctcactattttgcccagattgga----------------------------ctcaaagtcctgggctcgagtgaccctcctgctttggcctcccaaagcgctgagactgcaggtggtcaccactgagtccagc----TCTCATCCTGGTTTTACTAAGGTTGGTAGGTGGTGAAAAACATTGCTGAAATTGTTTTCATTCTTGA-ACATG--------------CTCAATGAGT-----GTTATGACAACCCCACATAGACTTTTACGGCCTACAAGCAGGTTTACTGTCACAGAGGTtgtcttagttcaggctgctataacaaagtactatagact-gggtaacttataaacaacagaagcttatttctcacagttccaaagtctggaggtttaagatcagggtgccaccactgtcaggttctcatgagaaccctcttttgggatgcagagtgctgacttacc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 965479 413 - 2385121 gatctcactattttgcccagattgga----------------------------ctcaaagccctgggctcgagtgaccctcctgctttggcctcccaaagtgctgagactgcaggtggtcaccactgagtccagc----TCTCATCCTAGTTTTACTAAGGTTGGT-GGTGGTGAAAAACATTGCTGAAATTGTTTTCATTCTTGA-ACATG--------------CTCAATGAGT-----GTTATGACAACCCCACATAGACTTTTACGGCCTACAAACAGGTTTACTGTCACAGAGGTGgtcttagttcaggctgctataacaaagtactatagact-gggtaacttataaacaacagaagcttatttctcacagttccaaagtctggaggtttaagatcagggtgccaccactgtcaggttctcatgagaaccctctttcggcatgcagagtgctgacttacc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2407660 412 + 4274983 gatctcactatttcgcccagattgga----------------------------ctcaaagtcctgggctcgagtgacccccctgctttggcctcccaaagtgctgagactacaggtgggcaccactgtgtccagc----TCTTATCCTAGTTTTACTAAGGTTGGTAGGTGGTGAAAAACATTG-TGAAATTGTCTTCATTCTTGA-ACATG--------------CTCAATGAGT-----G-TATGATAACCCCACATAGACTTTTACGGCCTACAAACAGATTTACTGTCACAGAGGTtgtcttagttcaggctgctataacaaagtactatagact-gggtaacttataaacaacagaagcttatttctcacagttccaaagtctggaagtttaagatcagggtgccaccactgtcaggttctcatgagaaccctctttcaggatgcagactgctgacttact i colAng1.NW_012111697v1 I 1556 I 4 s otoGar3.GL873654 5543164 434 + 5549422 agcctcaagctgtctccctgggtagagtgctgtggcatcacagctcacagcaacctccaactcctgggcttaggggattctcttgcctcagcctcccaagtagctgggaccacaggtgcccaccacaatgcccggctattttttgttacagtttggccagggctgg-----ggttcaaacc--------------ctccaccctcggtatatggggctggtgccctactcactgagccacaggtactgCC--CCCCACATACACTCTTACGACCTATAGACAGACTTATTGTCACAGAGTTTGTATAAgttcaagctgctgtaaccaagtaccatggactggggtggtttataaacaacagga-----------atagttctaaagtctggaagtctaagatcagggtgccagtg-ggttagggtctggtgagagccctattccagatttcagacagccaccttttt i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C a score=31190.000000 s hg38.chr19_GL383574v1_alt 142675 7 + 155864 atgttct s panTro5.chr19 36210004 7 + 61309027 atgttct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39953982 7 + 64411610 atgttct i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6365609 7 - 8369475 atgttct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63964177 7 - 106955855 atattct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34733256 7 + 59248254 gtattct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4607078 7 - 13342542 gtattct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5530156 7 + 7714307 gtattct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29333305 7 + 50890351 gtattct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 965892 7 - 2385121 gtattct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2408076 7 + 4274983 gtattct i colAng1.NW_012111697v1 I 4 C 0 s otoGar3.GL873654 5543598 7 + 5549422 ttgtttt i otoGar3.GL873654 C 0 I 613 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e rheMac8.chr19 30278983 112 + 53671032 I a score=13143.000000 s hg38.chr19_GL383574v1_alt 142682 3 + 155864 cat s panTro5.chr19 36210011 3 + 61309027 cat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39953989 3 + 64411610 cat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6365616 3 - 8369475 cat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63964184 3 - 106955855 cat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34733263 3 + 59248254 tat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4607085 3 - 13342542 tat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5530163 3 + 7714307 cat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29333312 3 + 50890351 cat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 965899 3 - 2385121 cat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2408083 3 + 4274983 cat i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e otoGar3.GL873654 5543605 613 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C e rheMac8.chr19 30278983 112 + 53671032 I a score=115565.000000 s hg38.chr19_GL383574v1_alt 142685 20 + 155864 atggcagaaagagagtgaac s panTro5.chr19 36210014 20 + 61309027 atggcagaaagagagtgaac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39953992 20 + 64411610 atggcagaaagagagtgaac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6365619 20 - 8369475 atggcagaaagagagtgaac i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63964187 20 - 106955855 acggcagaaagagggtgagc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30279095 20 + 53671032 atggcagaaagagagtgagc i rheMac8.chr19 I 112 C 0 s macFas5.chr19 34733266 20 + 59248254 atggcagaaagagagtgagc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4607088 20 - 13342542 atggcagaaagagtgtgagc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5530166 20 + 7714307 atggcagaaagagagtgagc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29333315 20 + 50890351 gtggcagaaagagagtgagc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 965902 20 - 2385121 atggcagaaagagagtgagc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2408086 20 + 4274983 atggcagaaagagagtgagc i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e otoGar3.GL873654 5543605 613 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C a score=2618657.000000 s hg38.chr19_GL383574v1_alt 142705 418 + 155864 tggcctctttttataagggcactaatctcatttatgatggctgcaccctcatgacctaaat-accttccaaaggccctacctccagataccatcacaatgggaattagatttcaacatatgcatttttggggaaacattcagtccgtaacaCAGGTGCACCCTTAGTTGTGGGCAATTCAGTTctga-tgctgtggtctgatgaccacaccctgacaacATAGGTGCATAGTGGGTAGTATGATT-----GCAAAGGATCTC-------------------------------------------------------------------------------------GTGTTTTTCTCTGTGGTTCCACTAAATTCTTTAGTCCAAGCCTTAGGCCTC-CCCTGCTTGGTCACCTGTTGGACCAACACTAGGTACAGGAAGTGCAGGAAGCTCAGTTTACAAAAAGTCATCTGGTGCTTCCAGCTGTATGTAG-CTTCCTCTGAAAGAAAAG s panTro5.chr19 36210034 418 + 61309027 tggcctctttttataagggcactaatctcatttatgatggctgcaccctcatgacctaaat-accttccaaaggccctacctccagataccatcacaatgggaattagatttcaacatatgcattttttgggaaacattcagtccgtaacaCAGGTGCACCCTTAGTTGTGGGCAATTCAGTTctga-tgctgtggtctgatgaccacaccctgacaacATGGGTGCATAGTGGGTAGTATGATT-----GCAAAGGATCTC-------------------------------------------------------------------------------------GTGTTTTTCTCTGTGGTTCCACTAAATTCTTTAGTCCAAGCCTTAGGCCTC-CCCTGCTTGGTCACCTGTTGGACCAACACTAGGTACAGGAAGTGCAGGAAGCTCAGTTTATAAAAAGTCATCTGGTGCTTCCAGCTCCATGTAC-CTTCCTCTGAAAGAAAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39954012 418 + 64411610 tggcctctttttataagggcactaatctcatttatgatggctgcaccctcatgacctaaat-accttccaaaggccctacctccagataccatcacaatgggaattagatttcaacatatgcatttttggggaaacattcagtccgtaacaCAGGTGCACCCTTAGTTGTGGGCAATTCAGTTCTGA-TGCTGTGGTCTGATGACCACACCCTGACAACATAGGTGCATAGTGGGTAGTATGATT-----GCAAAGGATCTC-------------------------------------------------------------------------------------GTGTTTTTCTCTGTGGTTCCACTAAATTCTTTAGTCCAAGCCTTAGGCCTC-CCCTGCTTGGTCACCTGTTGGACCAACACTAGGTACAGGAAGTGCAGGAAGCTCAGTTTATAAAAAGTCATCTGGTGCTTCCAGCTCCATGTAG-CTTCCTCTGAAAGAAAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6365639 418 - 8369475 tggcctctttttataagggcactaatctcatttatgatggctgcaccctcatgacctaaat-accttccaaaggccctacctccagataccatcacaatgggaattagatttcaacatatgcatttttggggaaacattcagtccgtaacaCAGGTGCACCCTTAGTTGTGGGCAATTCAGTTctga-tgctgtggtctgatgaccacaccctgacaacATAGGTACATAGTGGGTAGTATGATT-----GCAAAGGATCTC-------------------------------------------------------------------------------------GTGTTTTTCTCTGTGGTTCCACTAAATTGTTTAGTCCAAGCCTTAGGCCTC-CCCTGCTTGGTCACCTGTTGGACCAACACTAGGTACAGGAAGTGCAGGAAGCTCAGTTTACAAAAAGTCATCTGGTGCTTCCAGCTCTATGTAG-CTTCCTCTGAAAGAAAAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63964207 418 - 106955855 tggcctctttttataagggcactaatctcatttatgatggctgcaccctcatgacctaaat-acctcccaaagttcctacctccagataccatcacaatgggaattagatttcaacatatgcatttttggggaaacattcagaccgtaacaTAGGTGCACCCTTAGTCGTGGGCAATTCAGTTCTGA-TGCTGTGGTCTGATGACCACACCCTGACAACATAGGTGCATAGTGGGTAGTATGGTT-----GCAAAGGATCTC-------------------------------------------------------------------------------------GTGTATTTCTCTGTGGTTCCACTAAATTCTTTAGTCCAAGCTTTAGGCCTC-CCCTGCTTGGTCACCTGTTGGACCAACACTAGGTGCAGGAAGTGCAGGAAGCTCAGTTTACAAAAAGTCATCTGGTGCTTCCAGCTCTATGTAG-CTTCCTCTGAAAGAAAAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30279115 419 + 53671032 tggcctctttttataagggcactaatctcatttatgatggctgcaccctcatgacctaaat-acctcccaaaggccctacctccagataccatcacattgggaattagatttcaacatatgcgttttttgggaaacattcagtccatgacaCAGGTGTACCCTTGGTCGTGGGCAATTCAGTTctga-tgttgtggtctgaggaccacaccctgacaacATAGGTGCATAGTGGATAGTATAGTT-----GCAAAGGATCTC-------------------------------------------------------------------------------------GTGTATTTCTCTGTGGTTCCACTAAATGCTTTCGTCCAAGCCTTAGGCCTCCCCCTGCTTGGTCACCTGTTGGACCAACACTAGGTGCAGGAAGTGCAGGAAGCTCAGTTTACAAAAAGTCATCTGGTGCCTCCAGCTCTGTGTAG-CTTCCTCTGAAAGAAAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34733286 419 + 59248254 tggcctctttttataagggcactaatctcatttatgatggctgcaccctcatgacctaaat-acctcccaaaggccctacctccagataccatcacattgggaattagattttaacatatgcgttttttgggaaacattgagtccatgacaCAGGTGTACCCTTGGTCGTGGGCAATTCAGTTctga-tgttgtggtctgaggaccacaccctgacaacATAGGTGCATAGTGGATAGTATAGTT-----GCAAAGGATCTC-------------------------------------------------------------------------------------GTGTATTTCTCTGTGGTTCCACTAAATGCTTTCGTCCAAGCCTTAGGCCTCTCCCTGCTTGGTCACCTGTTGGACCAACACTAGGTGCAGGAAGTGCAGGAAGCTCAGTTTACAAAAAGTCATCTGGTGCCTCCAGCTCTGTGTAG-CTTCCTCTGAAAGAAAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4607108 419 - 13342542 tggcctctttttataagggcactaatctcatttatgatggctgcaccctcatgacctaaat-acctcccaaaggccctacctccagataccatcacattgggaattagatttcaacatatgcattttttgggaaacattcagtccatgacaCAGGTGTACCCTTGGTCGTGGGCAATTCAGTTctga-tgttgtggtctgaggaccacaccctgacaacATAGGTGCATAGTGGATAGTATAGTT-----GCAAAGGATCTC-------------------------------------------------------------------------------------GTGTATTTCTCTGTGGTTCCACTAAATGCTTTCGTCCAAGCCTTAGGCCTCCCCCTGCTTGGTCACCTGTTGGACCAACACTAGGTGCAGGAAGTGCAGGAAGCTCAGTTTACAAAAAGTCATCTGGTGCCTCCAGCTCTGTGTAG-CTTCCTCTGAAAGAAAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5530186 419 + 7714307 tggcctctttttataagggcactaatctcatttatgatggctgcaccctcatgacctaaat-acctcccaaaggccctacctccagataccatcacattgggaattagatttcaacatatgcgttttttgggaaacattcagtccatgacaCAGGTGTACTCTTGGTCGTGGGCAATTCAGTTctga-tgttgtggtctgaggaccacaccctgacaacATAGGTGCATAGTGGATAGTATAGTT-----GCAAAGGATCTC-------------------------------------------------------------------------------------GTGTATTTCTCTGTGGTTCCACTAAATGCTTTCGTCCAAGCCTTAGGCCTCCCCCTGCTTGGTCACCTGTTGGACCAACACTAGGTGCAGGAAGTGCAGGAAGCTCAGTTTACAAAAAGTCATCTGGTGCCTCCAGCTCTGTGTAG-CTTCCCCTGAAAGAAAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29333335 415 + 50890351 tggcctctttttataagggcactaatctcatttatgatggctgcaccctcatgacctaaat-acctcccaaaggccctacctccagataccatcacattgggaattagatttcaacatatgcgttttttgggaaacattcagtccatgacaCAGGTGTACCCTTGGTCGTGGGCAATTCAGTTCTGA----TGTGGTCTGAGGACCACACCCTG-CAACATAGGTGCCTAGTGGATAGTATAGTT-----GCAAAGGATCTC-------------------------------------------------------------------------------------GTGTATTTCTCTGTGGTTCCACTAAATGCTTTCGTCCAAGCCTTAGGCCTCCCCCTGTTTGGTGACCTGTTGGACCAACACTAGGTGCAGGAAGTGCAGGAAGCTCAGTTTACAAAAAGTCATCTGGTGCCTCCAGCTCTGTGTAG-CTTCCTCTGAAAGAAAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 965922 419 - 2385121 tggcctctttttataagggcactaatctcatttatgatggctgcaccctcatgacctaaat-acctcccaaaggccctacctccagataccatcacattgggaattagatttcaacatatgcgttttttgggaaactttcagtccatgacaCAGGTGTACCCTTGGTCATGGGCAATTCAGTTctga-tgttgtggtctgaggaccacaccctgacaacATAGGTGCATAGTGGATAGTATAGTT-----GCAAAGGATCTT-------------------------------------------------------------------------------------GTGTATTTCTCTGTGGTTCCACTAAATGCTTTCGTCCAAGCCTTAGGCCTCCCCCTGCTTGGTCACCTGTTGGACCAACACTAGGTGCAGGAAGTGCAGGAAGCTCAGTTTACAAAAAGTCATTTGGTGCCTCCAGCTCTGTGTAG-CTTCCCCTGAAAGAAAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2408106 415 + 4274983 tggcctctttttataagggcactaatctcatttatgatggctgcaccctcatgacttaaat-acctcccaaaggccctacctccagataccatcacattgggaattagatttcaacatatgcatttttggggaaacattcagtccatgacaC----GTACCCTTGGCCGTGGGCAATTCAGTTctga-tgttgtgatctgaggaccacaccctgacaacATAGGTACATAGTGGATAGTATGGTT-----GCAAAGGATCTC-------------------------------------------------------------------------------------GTGTATTTCACTGTGGTTCCACTAAATGCTTTTGCCCAAGCCTTAGGCCTCCCCCTGCTTGGTCACCTGTTGGACCAACACTAGGTGCAGGAAGTGCAGGAAGCTCAGTTTACAAAAAGTCATCTGGTGCCTCCAGCTCTGTGTAG-CTTCCTCTGAAAGAAAAG i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5544218 485 + 5549422 tagcctcttcttttaggggcactaatcccctttatggtagccatactcttgtgacctacttaacctcccaaaggccccacttctagatactatcacgttgggagttaaatttcaacatacgaattttgtggggaa-attcagtttgtaacaCAGGTACACCCTTTATCTTGGGGAATTCACT--TGATTGTCAAGATCTGAAGACTAAATCTTGAAAATATAGGTACACAGGAGGTAGTGTGGGTAtagagcagtggttctcaaccttcctaaatgtacgaccctttaatacagttcctgtaggtcccgacccacaggctgagaaccgctggtataGAGGGTCCCATGTGTATTTCTCTTTGGTTCCACTAAATGTTTTAGCCTCAGCCTC--------CCCTGCTTGGTTACCTGCTGGACCAACAGGAGATGTAGGAAGT----GAGGCCT------------GTCTTTTGGTTCCTACAGGTCTGTGTAGCCTTCCTCTGGGGGAAAGG i otoGar3.GL873654 I 613 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4664619 0 - 122678785 C e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C a score=1763798.000000 s hg38.chr19_GL383574v1_alt 143123 269 + 155864 GAAGCGTGGGGAGTGTAGAAAGCAGTT-AGTTCTTCACCTGAGGCTG--CAGTTCCAAAACTGAATGGAAACTGTGGTGTTTGGGAAGTGTGTTTGACTAA--AGTTTCCTTTCCTCAATTTCTCAAAGGAAACTGTGACTCTTC---CCCCACCATCTTCCACCCCTTCAGTTTCCATACATACAAGAAAGAA----------------------------------------------------------------------TGATGTCCTGG-------------------------AGCAACCT------------------CTGG--------------------AGAACAACTGTGGGGCCTCCCCATTACAAAACAG----CCTCCCCTGTGTGCAATCAGAATTGC s panTro5.chr19 36210452 269 + 61309027 GAAGCGTGGGGAGTGTAGAAAGCAGTT-AGTTCTTCACCTGAGGCTG--CGGTTCCAAAACTGAATGGAAACTGTGGTGTTTGGGATGTGTGTTTGACTAA--AGTTTCCTTTCCTCAATTTCTCAAAGGAAACTGTGACTCTTC---CCCCACCATCTTCCACCCCTTCACTTTCCATACATACAAGAAAGAA----------------------------------------------------------------------TGATGTCCTGG-------------------------AGCAACCT------------------CTGG--------------------AGAACAACTGTGGGGCCTCCCCATTACAAAACAG----CCTCCCCTGTGTGCAAACAGAATTGC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39954430 269 + 64411610 GAAGCGTGGGGAGTGTAGAAAGCAGTT-AGTTCTTCACCTGAGGCTG--CGGTTCCAAAACTGAATGGAAACTGTGGTGTTTGGGATGTGTGTTTGACTAA--AGTTTCCTTTCCTCAATTTCTCAAAGGAAACTGTGACTCTTC---CCCCACCATCTTCCACCCCTTCACTTTCCATACATACAAGAAAGAA----------------------------------------------------------------------TGATGTCCTGG-------------------------AGCAACCT------------------CTGG--------------------AGAACAACTGTGGGGCCTCCCCATTACAAAACAG----CCTCCCCTGTGTGCAAACAGAATTGC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6366057 269 - 8369475 GAAGCGTGGGGAGTGTAGAAAGCAGTT-AGTTCTTCACCTGAGGCTG--CAGTTCCAAAACTGAATGGAAACTGTGGTGTTTGGGATGTGTGTTTGACTAA--AGTTTCCTTTCCTCAATTTCTCAAAGGAAACTGTGACTCTTC---CCCCACCATCTTCCACCCCTTCACTTTCCATACATACAAGAAAGAA----------------------------------------------------------------------TGATGTCCTGG-------------------------AGCAACCT------------------CTGG--------------------AGAACAACTGTGGGGCCTCCCCATTACAAAACAG----CCTCCCCTGTGTGCAGTCAGAATTGC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63964625 269 - 106955855 GAAGCGTGGGGAGTGTAGAAAGCAGTT-AGTTCTTCACCTGAGGCTC--CAGTTCCAAAACTGAATGGAAACTTTGGTGTTTGGGATATGTGTTTGACTAA--AGTTTCCTTTCGTCAGTTTCTCAAAGGAAACCATGACTCTTC---CCCCACCATCTTCCACCCCTTCACTTTCCATACATACAAGAAAGAA----------------------------------------------------------------------TGATGTCCTGG-------------------------AGCAACCT------------------CTGG--------------------AGAACAACTGTGGGGCCTCCCCATTACAAAACAG----CCTCCCCTGTGTGGAATCAGATTTGC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30279534 266 + 53671032 GAAGTGTGGGGAGTGTAGAAAGCAGTT-AGTTCTTCACCTGAGGCTC--CAGTTCCAAAACTGAATGGAAAC--TGGTGTTTGGGATGTGCGTTTGACCAA--AGTTTCCTTTTGTCAATTTCTCAAAGGAAACTGTGACTCTTC---CCCCACTACCTTCCACCCCTTCACTTTCCATACATACAAGAAAGAA----------------------------------------------------------------------TGATGTCCTGG-------------------------CGCAACCT------------------CTGG--------------------AGAACAACTGTGGGGCCTCCCCATTACAAAACAA----CCTCCCC-GTGTGGAATCAGAATTGC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34733705 266 + 59248254 GAAGTGTGGGGAGTGTAGAAAGCAGTT-AGTTCTTCAGCTGAGGCTC--CAGTTCCAAAACTGAATGGAAAC--TGGTGTTTGGGATGTGCGTTTGACCAA--AGTTTCCTTTTGTCAATTTCTCAAAGGAAACTGTGACTCTTC---CCCCACTACCTTCCACCCCTTCACTTTCCATACATACAAGAAAGAA----------------------------------------------------------------------TGATGTCCTGG-------------------------CGCAACCT------------------CTGG--------------------AGAACAACTGTGGGGCCTCCCCATTACAAAACAA----CCTCCCC-GTGTGGAATCAGAATTGC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4607527 266 - 13342542 GAAGTGTGGGGAGTGTAGAAAGCAGTT-AGTTCTTCACCTGAGGCTC--CAGTTCCAAAACTGAATGGAAAC--TGGTGTTTGGGATGTGCGTTTGACCAA--AGTTTCCTTTTGTCAATTTCTCAAAGGAAACTGTGACTCTTC---CCCCACTACCTTCCACCCCTTCACTTTCCATACATACAAGAAAGAA----------------------------------------------------------------------TGATGTCCTGG-------------------------CGCAACCT------------------CTGG--------------------AGAACAACTGTGGGGCCTCCCCATTACAAAACAA----CCTCCCC-GTGTGGAATCAGAATTGC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5530605 269 + 7714307 GAAGCGTGGGGAGTGTAGAAAGCAGTT-AGTTCTTCACCTGAGGCTC--CAGTTCCAAAACTAAATGGAAACTTTGGTGTTTGGGATGTGCGTTTGACCAA--AGTTTCCTTTTGTCAATTTCTCAAAGGAAACTGTGACTCTTC---CCCAACTACCTTCCACCTCTTCACTTTCCATACATACAAGAAAGAA----------------------------------------------------------------------TGATGTCCTGG-------------------------CGCAACCT------------------CTGG--------------------AGAACAACTGTGGGGCCTCCCCATTACAAAACAA----CCTCCCCTGTGTGGAATCAGAATTGC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29333750 273 + 50890351 GAAGCGTGGGGAGTGTAGAAAGCAGTT-AGTTCTTCACCTGAGGCTC--CAGTTCCAAAACTGAATGGAAACTTTGGTGTTTGGGATGTGCGTTTGACCAA--AGTTTCCTTTCGTCAATTTCTTAAAGGAAACGGTGACTCTTC---CCCCACTACCTTCCACCCCTTCACTTTCCATACATACAAGAAAGAA----------------------------------------------------------------------TGATGTCCTGG-------------------------AGCAACCT------------------CTGG--------------------AGAACAACTGTGGGGCCTCCCCATTACAAAACAACCTCCCTCCCCTGTGTGGAATCAGAATTGC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 966341 269 - 2385121 GAAGCGTGGGGAGTGTAGAAAGCAGTT-AGTTCTTCACCTGAGGCTC--CAGTTCCAAAACTGAATGGAAACTTTGGTGTTTGGGATGTACGTTTGACCAA--AGTTTCCTTTTGTCAATTTCTCAAAGGAAACTGTGACTCTTC---CCCAACTACCTTCCACCTCTTCACTTTCCATACATACAAGAAAGAA----------------------------------------------------------------------TGATGTCCTGG-------------------------CACAACCT------------------CTGG--------------------AGAACAACTGTGGGGCCTCCCCATTACAAAACAA----CCTCCCCTGTGTGGAATCAGAATTGC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2408521 269 + 4274983 GAAGCGTGGGGAGTGTAGAAAGCAGTT-GGTTCTTCACTTGAGGCTC--CAGTTCCAAAACTGAATGGAAACTTTGGTGTTTGGGATGTGCGTTTGACCAA--AGTTTCCTTTCGTCAATTTCTCAAAGGAAACTGTGACTCTTC---CCCCACCACCTTCCACCCCTTCACTTTCCATACATACAAGAAAGAA----------------------------------------------------------------------TGATGTCCTGG-------------------------AGCAACCT------------------CTGG--------------------AGAACAAGTGTGGGGCCTCCCCATTACAAAACAA----CCTCCCCTGTGTGGAATCAGAATTGC i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5544703 374 + 5549422 GAAGCATGAGGGATGTGGAGGACGGTTGATTTCTTCGCCTGGGACTCTGTAATTCCAAAATGATGTGAA------------TCAGATGCATGTTTGACTAAAGAGTGTTCTTTTATTATTTTTTCAAAGGAATTTATGACCCTTC---CCC-ACCACCTTCCAGTCCCCTAGTTTCTGTGTACACAGCAAAGAACCATAAACTGAGCAGTCTTCTTGGTAGGTGAGAATGAGCCAGCCTCtagagcagtggttctcagccttcctaatgccttgatgtattttcattgttacaaagggatcgcaacccataggttgagaatcactgctaA--------------------AGAGTAATTGTCGGGACTCTCCATTGAAAAACAG----CCTCCTCTGTGTGGAATCAGAATTAC i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4664619 285 - 122678785 GAAGCCTGGGGAGTATGGAGGGCAGGT-GGTTCTTCATCTGAGGCTT--CAATTTCAAAACTGAATGGAAACTTCAGTGTTTTGGGTATGTCTTTGATCAA-GAGTGTTTTTTCATCAATATTTCAAAAGAATCTATTACCCTGCCCTCCCCACTACCTGCCACTCCCCAACTCTGCATGCGTACTC-----AA----------------------------------------------------------------------CCATGTCCTGG-------------------------AGCAGCCT------------------GTGGGAGAACCTCCTGGCTTGTGAAAAGCAACTGCGCAGACT--GCATTACCAAACAG----CC-CTCTTGTGTGGAATCAGAATTGC i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 420876 16 - 4471408 I e cebCap1.NW_016107633v1 1674665 17 - 2680843 I e saiBol1.JH378197 5471030 0 + 8899380 C e calJac3.chr22 28617260 0 + 49145316 C a score=3773861.000000 s hg38.chr19_GL383574v1_alt 143392 363 + 155864 ---TTTCGTCTGGGCAGAACCATACAACACACAGCTGGGCTGTGTGGAGAGCT-GTGGCCGACTGTAGGGCTTGCCCGCTAGTCTGTATTTTCCCCTACATTTCTCTACCTCTCATATAGTGGAATTGGTACCACGCAACCACCTCTGGCCTTTGATGGTGGCC-TTTGACAT-GCAACCACCTCAAAGCCAAAGGGCTTTGAAGGGAGGTGATGTGTGTCACTTTCAGTGGGAAGTATTAAAGAGTGGGTATGAGTTTTGACTTTCTTTTTCTGTGCTAGGGCAACCATGGGAGACATAAGTTCTAGTAGTGTCCCTGTAAGCTGAAGAAGGGCTGC----TAGACCCACAGTGAATTTT-TGTGAACAAGAA- s panTro5.chr19 36210721 363 + 61309027 ---TTTCATCTGGGCAGAACCATACGACACACAGCTGGGCTGTGTGGAGAGCT-GTGGCCGACTGTAGGGCTTGCCCACTAGTCTGCATTTTCCCCTACATTTCTCTACCTCTCATATAGTGGAATTGGTACCACGCAACCACCTCTGGCCTTTGATGGTGGCC-TTTGACAT-GCAACCACCTCAAAgccaaagggctttgaagggaggtgatgtgtgtcactttcagtgggaagtattaaagagttggtgtgagttttgactttctttttctgtgctagggcaaccATGGGAGACATAAGTTCTAGTAGTGTCCCTGTAAGCTGAAGAAGGGCTGC----TAGACCCACAATGAATTTT-TGTGAACAAGAA- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39954699 363 + 64411610 ---TTTCGTCTGGGCAGAACCATACGACACACAGCTGGGCTGTGTGGAGAGCT-GTGGCCGACTGTAGGGCTTGCCCACTAGTCTGTATTTTCCCCTACATTTCTCTACCTCTCATATAGTGGAATTGGTACCACGCAACCACCTCTGGCCTTTGATGGTGGCC-TTTGACAT-GCAACCACCTCAAAgccaaagggctttgaagggaggtgatgtgtgtcactttcagtgggaagtattaaagagttggtgtgagttttgactttctttttctgtgctagggcaaccATGGGAGACATAAGTTCTAGTAGTGTCCCTGTAAGCTGAAGAAGGGCTGC----TAGGCCCACAATGAATTTT-TGTGAACAAGAA- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6366326 364 - 8369475 ---TTTCGTCTGGGCAGAACCATACAACACACAGCTGGGCTGTATGGAGAGCT-GTGGCCGACTGTAGGGCTTGCCCACTAGTCTGTATTTTCCCCTACATTTCTCTACCTCTCATATAGTGGAATTGGTACCACGCAACCACCTCTGGCCTTTGATGGTGGCC-TTTGACATGGCAACCACCTCAAAGCCAAAGGGCTTTGAAGGGAGGTGATGTGTGTCACTTTCAGTGGGAAGTATTAAAGAGTGGGTATGAGTTTTGACTTTCTTTTTCTGTGCTAGGGCAACCATGGGAGACATAAGTTCTAGTAGTGTCCCTGTAAGCTGAAGAAGGGCTGC----TAGACCCACAATGAGTTTT-TGTGAACAAGAA- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63964894 361 - 106955855 ---TTTCGTCTGGGCAGAACCATACAACACACAGCTGGGCTGTGTGGACAGCT-GTGGCCGACTGTAGGGCTTGCCCACTATTCTGTATTTTCCCCTACATTTCTCTACCTCT--TATAGTGGAATTGGTACCACGCAACCACCTCTGGCCTTTGGTGGTGGCC-TTTGACAT-GCAACCACCTCAAAgccaaagggctttgaagggaggtgatgtgtgtcactttcagtgggaagtattaaagagcgggtatgagttttgactttctttttctgtgctagggcaaccATGGGAGACATAAGTTCCAGTAGTGTCCCTGTAAGCTGAAGAAGGGCTGC----TAGACCCACAATGAATTTT-TGTGAACAAGAA- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30279800 363 + 53671032 ---TTTCATCTGGGCAGAACCATAGAACACACAGCTGGGCTGTGTGGACAACT-GTGGCCGACTGTAGGGCTTGCCCGCTATTCTATATGTTCCCCTACATTTCTCTACCTCTCTTGTAGTGGAATTGGTACCACGCAACCACCTCTGGCCTTTGGTGGTGGCCTTTTGAGAT-TCAA-CACCTCAGAGCCAAAGGGCTTTGAAGGGAGGCGATATGTGTCACTTTCAGTGGGAAGTATTAAAGAGTGAGTATGAGTTTTGACTTTCTTTTTCTGTGCTGGGGCAACCATGGGGGACATAAGTTCTAGTAGTGTCCCTATAAGCTGAAGAAGGGCTGC----CAGACCCACAATGAATTTT-TGTGAACAAGAA- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34733971 363 + 59248254 ---TTTCATCTGGGCAGAACCATAGAACACATAGCTGGGCTGTGTGGACAACT-GTGGCCGACTGTAGGGCTTGCCCGCTATTCTATATGTTCCCCTACATTTCTCTACCTCTCTTGTAGTGGAATTGGTACCACGCAACCACCTCTGGCCTTTGGTGGTGGCCTTTTGAGAT-TCAA-CACCTCAGAGCCAAAGGGCTTTGAAGGGAGGCGATGTGTGTCACTTTCAGTGGGAAGTATTAAAGAGTGAGTATGAGTTTTGACTTTCTTTTTCTGTGCTGGGGCAACCATGGGGGACATAAGTTCTAGTAGTGTCCCTATAAGCTGAAGAAGGGCTGC----CAGACCCACAATGAATTTT-TGTGAACAAGAA- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4607793 363 - 13342542 ---TTTCATCTGGGCAGAACCATAGAACACACAGCTGGGCTGTGTGGACAACT-GTGGCCGACTGTAGGGCTTGCCCGCTATTCTATATGTTCCCCTACATTTCTCTACCTCTCTTGTAGTGGAATTGGTACCACGCAACCACCTCTGGCCTTTGGTGGTGGCCTTTTGAGAT-TCAA-CACCTCAGAGCCAAAGGGCTTTGAAGGGAGGCGATGTGTGTCACTTTCAGTGGGAAGTATTAAAGAGTGAGTATGAGTTTTGACTTTCTTTTTCTGTGCTGGGGCAACCATGGGGGACATAAGTTCTCGTAGTGTCCCTATAAGCTGAAGAAGGGCTGC----CAGACCCACAATGAATTTT-TGTGAACAAGAA- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5530874 364 + 7714307 ---TTTCATCTGGGCAGAACCATACAACACACAGCTGGGCTGTGTGGACAACT-GTGGCCGACTGTAGGGCTTGCCCACTATTCTGTATGTTCTCCTACATTTCTCTACCTCTCTTGTAGTGGAATTGGTACCACGCAACCACCTCTGGCCTTTGGTGGTGGCCTTTTGAGAT-TCAACCACCTCAAAGCCAAAGGGCTTTGAAGGGAGGCGATGTGTGTCACTTTCAGTGGGAAGTATTAAAGAGTGAGTATGAGTTTTGACTTTCTTTTTCTGTGCTGGGGCAACCATGGGGGACATAAGTTCTAGTAGTGTCCCTATAAGCTAAAGAAGGGCTGC----CAGACCCACAATGAATTTT-TGTGAACAAGAA- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29334023 364 + 50890351 ---TTTCATCTGGGCAGAACCATACAACACACAGCTGGGCTGTGTGGACAACT-GTGACCGACTGTAGGGCTTGCCCGCTATTCTGTATGTTCCCCTACATTTCTCTACCTCTCTTGTAGTGGAATTGGTACCACGCAACTACCTCTGGCCTTTGGTGGTGGCCTTTTGAGAG-TCAACCACCTCAAAGTCAAAGGGCTTTGAAGGGAGGCGATGTGTGTCACTTTCAGTGGGAAGTATTAAAGAGTGAGTATGAGTTTTGACTTTCTTTTTCTGTGCTGGGGCAACCATGGGGGACATAAGTCCTAGTAGTGTCCCTATAAGCTGAAGAAGGGCTGC----TAGACCCACAATGAATTTT-TGTGAACAAGAA- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 966610 364 - 2385121 ---TTTCATCTGGGCAGAACCATACAACACACAGCTGGGCTGTGTGGACAACT-GTGGCCGACTGTAGGGCTTGCCCACTATTCTGTATGTTCCCCTACATTTCTCTACCTCTCTTGTAGTGGAATTGGTACCACGCAACCACCTCTGGCCTTTGGTGGTGGCCTTTTGAGAT-TCAACCACCTCAAAGCCAAAGGGCTTTGAAGGGAGGTGATGTGTGTCACTTTCAGTGGGAAGTATTAAAGAGTGAGTATGAGTTTTGACTTTCTTTTTCTGTGCTGGGGCAACCATGGGGGACGTAAGTTCTAGTAGTGTCCCTATAAGCTGAAGAAGGGCTGC----CAGACCCACAATGAATTTT-TGTGAACAAGAA- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2408790 367 + 4274983 ---TTTCATCTGGGCAGAACCATACAACACACAGCTGGGCTGTGTGGACAACT-GTGGCCGACTGTAGGGCTTGCCCGCTATTCTGTATGCTCCCCTGCATTTCTCTACCTCTCTTGTAGTGGAATTGGTACCATGCAACCACCTCTGGCCTTTGGTGGTGGCC-TTTGAGAT-GCAACCACCTCAAAGCCAAAGGACTTTGAAGGGAGGTGATGTGTGTCCCTTTCAGTGGGAAGTATTAAAGAGTGGGTATGAGTTTTGACTTTCTTTTTCTGTGCTGGGGCAACCATGGGGGACATAAGTTCTAGTGGTGTCTCTATAAGCTGAAGAAGGGCTGCCAGACAGACCCACAATGAATTTT-TGTGAACAAGAA- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28617260 324 + 49145316 ---tTTCATCTGGGCAGAACCATACAACACACAGCTGGGCTGTGTGGATAACT-GTGGCAGACTGTAGTGCTTGCCCACTATTCTGTATGTTCCCctacatttctcaacctctcttgtagtggaattggtaccatgcaaccacttctggc----------------------------------------cagagggctttgaagggaggtgatgtgtgtcactttcagtgggaagtagtaaagagtgggtataagttttgactttctttttcTGTGCT-GGGCAACCATGGGAGACATGAGTTCTAGTGGTGTCCCTTTAAGCTGAAGAAGGGCTGC----CAGACCCACATTGAATTTT-TGTGAACAAGAA- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5471030 324 + 8899380 ---tTTCATCTGGGCAGAACCATACAACACATAGCTGGGCTGTGTGGATAACT-GTGGCAGACTGTAGTGCTTGCCCACTATTCTGTATGTTCCCctacatttctcaacctctcttgtagtggaattggtatcatgcaaccacttctggc----------------------------------------cagagggctttgaagggaggtgatgtgtgtcactttcagtgggaagtagtaaagagtgggTATAAGTTTTGACTCTCTTTTTCTCTGCT-GGGCAACCATGAGAGACACGAGTTCTACTGGTGTCTCTTTAAGCCGAAGAAGGGCCGC----CAGACCCACATTGAATTTT-TGTGAACAAGAA- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1674682 324 - 2680843 ---tTTCATCTGGGCAGAATCATACAACACACAGCTGGGCTGTGTGGATAACT-GTGGCAGACTGTAGTGCTTGCCCACTATCCTGTATGTTCCCctacatttctcaacctctcttgtagtggaattggtactatgcaaccacttctggc----------------------------------------cagagggctttgaagggaggtgatgtgtgtcactttcagTGGGAAGTAGTAAAGAGCAGGTTTAAGTTTTGACTTTCTTTTTCTGTGCT-GGGCAACCATGGGAGACATGAGTTCTAGTGGTGTCTCTTTAAGCTGAAGAAGGGTCGC----CAGACCCACATTGAATTTT-TGTGAACAAGAA- i cebCap1.NW_016107633v1 I 17 I 7141 s aotNan1.NW_018505377v1 420892 324 - 4471408 ---tTTCATCTGGGCAGAACCATACAACACACAGCTGGGCTGTGTGGATAACT-GTGGCAGACTGTAGTGCTTGCCCAGTATTCTGTATGTTCCCctacatttctcaacgtctcttgtagtggaattggtaccatgcaaccacttctggc----------------------------------------cagagggctttgaagggaggtgatgtgtgtcactttcagtaggaagtagtaaagagtgggtataagttttgactttctttttcTGTGCT-GGGCAAGCATGGGAGACATGAGTTCTAGTGGTGTCCCTTTAAGCCGAAGAAGGGCTGC----CAGACCCACATTGAATTTT-TGTGAACAAGAA- i aotNan1.NW_018505377v1 I 16 C 0 s otoGar3.GL873654 5545077 297 + 5549422 ---TTTT------GCAGAACTGTACAACATATAGCTGGGCTGAGTCAACAAC---TGGCTGGCTGTAATGCTTGCCGAGTATTCTATATGTTCCACTATATTTCTCAAATTCT-------------------CATGTGACCGATTTTGGC----------------------------------------CAAAGGGCTTGGAAGGAAAGTGATATGTGTCACTTTCA-TGGGAAATAGTAAAGAGTGGGTATGCGTTTTCACT-TCTTTTTCTGTATTGGAGTGACTGTGGAACGGATAAGTTCTTATGACATCCCTGTAAATTAAAGAGGGACTTC----GAGGCCCACGTTGAGTTTTGTGTGAGCAAGAA- i otoGar3.GL873654 C 0 I 6 s canFam3.chr1 4664904 319 - 122678785 CATCACTACCCGATCAGAACTAT-CAACATGCAGCGAGACTGGGCTGTCAACCAATGGCTGACACTAATGCTTACCCGATATTCCATAAGGGCCCctacatttcccagcctctcttggagttgcattggtaccatgtgactaattctggt----------------------------------------caaagggtcatgaggtgaagtgatgtgtgtcgcatccagccggaagcagtcaagagTAGGTATGAGTT-------TCTTGTTTTGTACTCAGGTGACT----GGGAAACAAGTTCCAGTCATGTCATAACAAGTTGAAGACAGGCTGC----CAGACCCACACTGAACTGCATGCAAAAGAGAGA i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I a score=40107.000000 s hg38.chr19_GL383574v1_alt 143755 4 + 155864 GTAA s panTro5.chr19 36211084 4 + 61309027 GTAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955062 4 + 64411610 GTAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6366690 4 - 8369475 GTAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965255 4 - 106955855 GTAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30280163 4 + 53671032 GTAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34734334 4 + 59248254 GTAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4608156 4 - 13342542 GTAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5531238 4 + 7714307 GTAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29334387 4 + 50890351 GTAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 966974 4 - 2385121 GTAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2409157 4 + 4274983 GTAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28617584 4 + 49145316 GTAA i calJac3.chr22 C 0 I 1 s saiBol1.JH378197 5471354 4 + 8899380 GTAA i saiBol1.JH378197 C 0 I 1 s aotNan1.NW_018505377v1 421216 4 - 4471408 GTAA i aotNan1.NW_018505377v1 C 0 I 2694 s otoGar3.GL873654 5545380 4 + 5549422 GCTA i otoGar3.GL873654 I 6 I 1 s canFam3.chr1 4665223 4 - 122678785 GAAG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I a score=37107.000000 s hg38.chr19_GL383574v1_alt 143759 4 + 155864 TCTG s panTro5.chr19 36211088 4 + 61309027 TCTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955066 4 + 64411610 TCTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6366694 4 - 8369475 TCTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965259 4 - 106955855 TCTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30280167 4 + 53671032 TCTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34734338 4 + 59248254 TCTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4608160 4 - 13342542 TCTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5531242 4 + 7714307 TCTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29334391 4 + 50890351 TCTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 966978 4 - 2385121 TCTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2409161 4 + 4274983 TCTG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28617589 4 + 49145316 TCTG i calJac3.chr22 I 1 C 0 s saiBol1.JH378197 5471359 4 + 8899380 TCTG i saiBol1.JH378197 I 1 C 0 s otoGar3.GL873654 5545385 4 + 5549422 TTTA i otoGar3.GL873654 I 1 C 0 s canFam3.chr1 4665227 4 - 122678785 TCTG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I a score=-16478.000000 s hg38.chr19_GL383574v1_alt 143763 3 + 155864 gg--------------------------------------------c s panTro5.chr19 36211092 3 + 61309027 Ag--------------------------------------------c i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955070 3 + 64411610 gg--------------------------------------------c i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6366698 3 - 8369475 gg--------------------------------------------c i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965263 4 - 106955855 GGC-------------------------------------------c i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30280171 3 + 53671032 gg--------------------------------------------c i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34734342 3 + 59248254 gg--------------------------------------------c i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4608164 3 - 13342542 gg--------------------------------------------c i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5531246 3 + 7714307 gg--------------------------------------------c i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29334395 3 + 50890351 gg--------------------------------------------c i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 966982 3 - 2385121 gg--------------------------------------------c i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2409165 3 + 4274983 gg--------------------------------------------c i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28617593 47 + 49145316 ggccaacatggtgaaaccctgtctctactaaaaatacaaaaatAggc i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5471363 47 + 8899380 ggccaacagggtgaaaccccatctatactaaaaatacaaaaatAggc i saiBol1.JH378197 C 0 C 0 s otoGar3.GL873654 5545389 3 + 5549422 GG--------------------------------------------C i otoGar3.GL873654 C 0 I 393 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I a score=530236.000000 s hg38.chr19_GL383574v1_alt 143766 107 + 155864 tgggcgccttggctcat-gcctgtaatcccagcactttgggaggccgaggcagtcggatcagttgaggccaggagttcgagaccagcctagccaacatggtgaaaccc s panTro5.chr19 36211095 107 + 61309027 tgggcgccttggctcat-gcctgtaatcccagcactttgggaggccgaggcagtcggatcagttgaggccaggagttcgagaccagcctagccaacatggtgaaaccc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955073 107 + 64411610 tgggcgccttggctcat-gcctgtaatcccagcactttgggaggccgaggcagtcggatcagttgaggccaggagttcgagaccagcctagccaacatggtgaaaccc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6366701 107 - 8369475 tgggcgccttggctcat-gcctgtaatcccagcactttgggaggccgaggcagtcggatcagttgaggccaggagttcgagaccagcctagccaacatggtgaaaccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965267 107 - 106955855 cgggcgccttggctcat-gcctgtaatcccagcactttgggaggccaaggcagtcggatcagttgaggccaggagttcgagaccagcctagccaacatggtgaaaccc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30280174 73 + 53671032 tggacaccttggctcat-acctgtaatcccaggacttggggaggccgaggca----------------------------------cctagccaacatggtgaaaccc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34734345 73 + 59248254 tggacaccttggctcat-acctgtaatcccaggacttggggaggccgaggca----------------------------------cctagccaacatggtgaaaccc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4608167 74 - 13342542 tggacaccttggctcataacctgtaatcccaggacttggggaggccgaggca----------------------------------cctagccaacatggtgaaaccc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5531249 73 + 7714307 tggacaccttggctcat-acctgtaattccagcacttggggaggccgaggca----------------------------------cctagccaacatggtgaaaccc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29334398 73 + 50890351 tggacaccttggctcat-acctgtaatcccagcacttggggaggccgaggca----------------------------------cctagccaacatggtgaaaccc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 966985 73 - 2385121 tggacaccttggctcat-acctgtaatcccagcacttggggaggccgaggca----------------------------------cctagccaacatggtgaaaccc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2409168 73 + 4274983 tggacaccttggctcat-gcctgtaatctcagcactttgggaggccgaggca----------------------------------cctagccaatatggtgaaaccc i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28617640 105 + 49145316 caggcacggtggctcac-gcctgtaatcccagcactttgggaggccgaggtgggtggatca--caaggtcaggggattgagaccaacctggccaacatggtgaaatcc i calJac3.chr22 C 0 I 2511 s saiBol1.JH378197 5471410 105 + 8899380 tgggcgcggtggctcac-acttgtaatcccagcactttgggaggctgaggagggtggatca--caaggtcaggggattgagaccaccctggccaacatggtgaaactc i saiBol1.JH378197 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e otoGar3.GL873654 5545392 393 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I a score=52584.000000 s hg38.chr19_GL383574v1_alt 143873 8 + 155864 tgtttcta s panTro5.chr19 36211202 8 + 61309027 tgtttcta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955180 8 + 64411610 tgtttcta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6366808 8 - 8369475 tgtttcta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965374 8 - 106955855 tgtttcta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30280247 8 + 53671032 tgtttcta i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34734418 8 + 59248254 tgtttcta i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4608241 8 - 13342542 tgtttcta i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5531322 8 + 7714307 tgtttcta i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29334471 8 + 50890351 tgtttcta i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 967058 8 - 2385121 tgtttcta i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2409241 8 + 4274983 tgtttcta i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5471515 8 + 8899380 cgtattta i saiBol1.JH378197 C 0 I 3180 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e otoGar3.GL873654 5545392 393 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e calJac3.chr22 28617745 2511 + 49145316 I a score=479185.000000 s hg38.chr19_GL383574v1_alt 143881 106 + 155864 ccaaaaatacaaaaattggctgggcatggtggtgtgtgcctgtgatctcccagctactcaggaggctgaggtaggagaattgcttgaacccaggaggtgaaggttg s panTro5.chr19 36211210 106 + 61309027 ccaaaaatacaaaaattagctgggcatggtggtgtgtgcctgtgatctcccagctactcaggaggctgaggtaggagaattgcttgaacccaggaggtgaaggttg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955188 106 + 64411610 ccaaaaatacaaaaattagctgggcatggtggtgtgtgcctgtgatctcccagctactcaggaggctgaggtaggagaattgcttgaacccaggaggtgaaggttg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6366816 106 - 8369475 ccaaaaatacaaaaattagctgggcatggtggtgtgtgcctgtgatctcccagctactcaggaggctgaggtaggagaattgcttgaacccaggaggtgaaggttg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965382 106 - 106955855 ccaaaaacacaaaaattagctgggcatggtggtgtgtgcctgtgatctcccagctactcaggaggctgaggtaggagaattgcttgaacccaggaggtgaaggttg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30280255 82 + 53671032 ccaaaaatacaaaaattagctgggcatggtggtatgtgcctg------------------------tgaggtaggagaatcgcttgaacccaggaggtgaaggttg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34734426 82 + 59248254 ccaaaaatacaaaaattagctgggcatggtggtgtgtgcctg------------------------tgaggtaggagaatcgcttgaacccaggaggtgaaggttg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4608249 82 - 13342542 ccaaaaatacaaaaattagctgggaatggtggtgtgtgcctg------------------------tgaggtaggagaatcgcttgaacccaggaggtgaaggttg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5531330 82 + 7714307 ccaaaaatacaaaaattagctgggcatggtggtgtgtgcctg------------------------tgaggtaggagaatcgcttgaacccaggaggtgaaggttg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29334479 82 + 50890351 ccaaaaatacaaaaattagctgggcatggtggtatgtgcctg------------------------tgaggtaggagaatcgcttgaacccaggaggtgaaggttg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 967066 82 - 2385121 ccaaaaatacaaaaattagctggccatggtggtgtgtgcctg------------------------cgaggtaggagaatcgcttgaacccaggaggtgaaggttg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2409249 82 + 4274983 ccaaaaatacaaaaattagctggccacggtgatgtgtgcctg------------------------tgaggtaggagaatcgcttgaacccaggaggtgaaggttg i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e otoGar3.GL873654 5545392 393 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=393728.000000 s hg38.chr19_GL383574v1_alt 143987 65 + 155864 cagtgagccaaga----ttgcacca--ctgcactccagcctgggcaacagagca-agactcc---gtctcaaaaa s panTro5.chr19 36211316 65 + 61309027 cagtgagctaaga----ttgcacca--ctgcactccagcctgggcaacagagca-agactct---gtctcaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955294 65 + 64411610 cagtgagccaaga----ttgcacca--ctgcactccagcctgggcaacagagca-agactct---gtctcaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6366922 65 - 8369475 cagtgagccaaga----ttgcacca--ctgcactctagcctgggcaacagagca-agactct---gtctcaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965488 65 - 106955855 cagtgaaccaaga----ttgcacca--ctgcactccagcctgggcaacagagca-agactcc---gtctcaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30280337 65 + 53671032 cagtgagccaaga----ttgcgcca--ctgcactccaacctgggcaacagagca-agactct---gtctcaaaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34734508 65 + 59248254 cagtgagccaaga----ttgcgcca--ctgcactccaacctgggcaacagagca-agactct---gtctcaaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4608331 65 - 13342542 cagtgagccaaga----ttgcgcca--ctgcactccaacctgggcaacagagca-agactct---gtctcaaaaa i macNem1.NW_012011689v1 C 0 I 1219 s cerAty1.NW_012005268v1 5531412 65 + 7714307 cagtaagccaaga----ttgcgcca--ctgcactccaacctgggcaacagagca-agactct---gtctcaaaaa i cerAty1.NW_012005268v1 C 0 I 625 s chlSab2.chr6 29334561 65 + 50890351 cagtgagccaaga----ttgcgccg--ctgcactccaacctgggcaacagagca-agactct---gtctcaaaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 967148 65 - 2385121 cagtaagccaaga----ttgcgcca--ctgcactccaacctgggcaacagagca-agactct---gtctcaaaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2409331 65 + 4274983 cagtgagccaaga----ttgcgcca--ctgcacttcaacctgggcaacagagca-agactct---gtctcaaaaa i colAng1.NW_012111697v1 C 0 I 2 s otoGar3.GL873654 5545785 75 + 5549422 cagtgggttaagaacacttatatcagcctacagttcatacaaaccatcttaacacagaatccaaagttttaaaga i otoGar3.GL873654 I 393 I 9 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=10030.000000 s hg38.chr19_GL383574v1_alt 144052 4 + 155864 caaa s panTro5.chr19 36211381 4 + 61309027 caaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955359 4 + 64411610 caaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6366987 4 - 8369475 taaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965553 4 - 106955855 caaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30280402 4 + 53671032 TATA i rheMac8.chr19 C 0 I 296 s macFas5.chr19 34734573 4 + 59248254 TATA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 29334626 4 + 50890351 TATA i chlSab2.chr6 C 0 I 3 s manLeu1.NW_012102454v1 967213 4 - 2385121 TATA i manLeu1.NW_012102454v1 C 0 I 8 s colAng1.NW_012111697v1 2409398 4 + 4274983 TATA i colAng1.NW_012111697v1 I 2 I 1 s otoGar3.GL873654 5545869 4 + 5549422 caaa i otoGar3.GL873654 I 9 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e cerAty1.NW_012005268v1 5531477 625 + 7714307 I e macNem1.NW_012011689v1 4608396 1219 - 13342542 I a score=5558.000000 s hg38.chr19_GL383574v1_alt 144056 8 + 155864 aaGTAAAT s panTro5.chr19 36211385 8 + 61309027 aaGTAAAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955363 8 + 64411610 aaGTAAAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6366991 8 - 8369475 aaGTAAAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965557 8 - 106955855 aaGTAAAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34734577 5 + 59248254 ---TATAT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 29334633 4 + 50890351 ----ATAT i chlSab2.chr6 I 3 I 4 s colAng1.NW_012111697v1 2409403 4 + 4274983 ----ATAT i colAng1.NW_012111697v1 I 1 I 4 s otoGar3.GL873654 5545873 7 + 5549422 actcaaa- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e manLeu1.NW_012102454v1 967217 8 - 2385121 I e cerAty1.NW_012005268v1 5531477 625 + 7714307 I e macNem1.NW_012011689v1 4608396 1219 - 13342542 I e rheMac8.chr19 30280406 296 + 53671032 I a score=5164.000000 s hg38.chr19_GL383574v1_alt 144064 2 + 155864 CT s panTro5.chr19 36211393 2 + 61309027 CT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955371 2 + 64411610 CT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6366999 2 - 8369475 CT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965565 2 - 106955855 CT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34734582 2 + 59248254 AT i macFas5.chr19 C 0 I 289 s cerAty1.NW_012005268v1 5532102 2 + 7714307 CT i cerAty1.NW_012005268v1 I 625 C 0 s chlSab2.chr6 29334641 2 + 50890351 CT i chlSab2.chr6 I 4 C 0 s colAng1.NW_012111697v1 2409411 2 + 4274983 CT i colAng1.NW_012111697v1 I 4 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e otoGar3.GL873654 5545880 0 + 5549422 C e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e manLeu1.NW_012102454v1 967217 8 - 2385121 I e macNem1.NW_012011689v1 4608396 1219 - 13342542 I e rheMac8.chr19 30280406 296 + 53671032 I a score=461061.000000 s hg38.chr19_GL383574v1_alt 144066 102 + 155864 ggttgggcatggcggctcacgcctataatcccagcactttgggaggctgaggcag--gaatca-----gttgaggtcaggagtttgagacc-agcctgcgcaac-------atggtg s panTro5.chr19 36211395 102 + 61309027 ggttgggcatggcggctcacgcctataatcccagcactttgggaggctgaggcag--gaatca-----gttgaggtcaggagtttgagacc-agcctgcgcaac-------atggtg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955373 102 + 64411610 ggttgggcatggcggctcacgcctatgatcccagcactttgggaggctgaggcag--caatca-----gttgaggtcaggagtttgagacc-agcctgcgcaac-------atggtg i panPan2.chr19 C 0 I 20 s gorGor5.CYUI01015150v1 6367001 102 - 8369475 ggttggtcatggcggctcacgcctataatcccagcactttgggaggctgaggcag--gaatca-----gttgaggtcaggagtttgagacc-agcctgcgcaac-------atggtg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965567 102 - 106955855 GATTgggcatggtggctcacgcctgtaatcccagcacttcgggaggctgaggcag--gaatca-----gttgaggtcaggagtttgagacc-agcctgtgcaac-------atggtg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30280702 102 + 53671032 ggttgggcatggtggctcatgcctgtaatcccagcattttgggaggccagggcag--gaatca-----gttgaggtcaggagtttgagacc-agcctgcgcaac-------atggtg i rheMac8.chr19 I 296 C 0 s macFas5.chr19 34734873 102 + 59248254 ggttgggcatggtggctcatgcctgtaatcccagcattttgggaggccagggcag--gaatca-----gttgaggtcaggagtttgagacc-agcctgcgcaac-------atggtg i macFas5.chr19 I 289 C 0 s cerAty1.NW_012005268v1 5532104 102 + 7714307 ggttgggcatggtggctcatgcctgtaatcccagcattttgggaggccagggcag--aaatca-----gttgaggtcaggagtttgagacc-agcctgcgcaac-------atggtg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29334643 102 + 50890351 ggttgggcatggtggctcatgcctgtaatcccagcatttggggaggccagggcag--gaatca-----gttgaggtcaggagtttgagacc-agtctgcgcaac-------atggtg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 967225 102 - 2385121 ggctgggcgcggtggctcaagcctgtaatcccagcactttaggaggccgagacgggtggatca-------cgaggtcaggagatcgagacc-atcctggctaac-------acggtg i manLeu1.NW_012102454v1 I 8 C 0 s colAng1.NW_012111697v1 2409413 102 + 4274983 ggttgggcatggtggctcatgcctgtaatcccagcattttgagaggccagggcag--gaatca-----gttgaggtcaggagtttgagacc-agcctgcgcaac-------atagtg i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5545880 96 + 5549422 --------atggggcttgacgcctata--cacagt---------ggatacggcac--ctgccacatacactgaagttggcaggttcaaacctagcctgggccatctaaacaacagtg i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e macNem1.NW_012011689v1 4608396 1219 - 13342542 I a score=14605.000000 s hg38.chr19_GL383574v1_alt 144168 6 + 155864 -aaa-ccc s panTro5.chr19 36211497 7 + 61309027 -aaacccc i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6367103 6 - 8369475 -aaa-ccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965669 6 - 106955855 -aaa-ccc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30280804 6 + 53671032 -aaa-ccc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34734975 6 + 59248254 -aaa-ccc i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5532206 6 + 7714307 -aaa-ccc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29334745 6 + 50890351 -aaa-ccc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 967327 6 - 2385121 -aaa-ccc i manLeu1.NW_012102454v1 C 0 I 288 s colAng1.NW_012111697v1 2409515 6 + 4274983 -aaa-ccc i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5545976 3 + 5549422 caa----- i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e macNem1.NW_012011689v1 4608396 1219 - 13342542 I e panPan2.chr19 39955475 20 + 64411610 I a score=244876.000000 s hg38.chr19_GL383574v1_alt 144174 66 + 155864 tatctctaccaaaaatacaa-aaattagctgggcttggtgatgcatgcctgtagttccagctactgt s panTro5.chr19 36211504 66 + 61309027 tatctctaccaaaaatacaa-aaattagctgggcttggtgatgcatgcctgtagttccagctactgt i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6367109 65 - 8369475 tatctctacc-aaaatacaa-aaattagctgggcttggtgatgcatgcctgtagttccagctactgt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965675 63 - 106955855 catctctaccaaaaat---a-aaattagctgggcttggtgatgcatgcctgtagttccagctactgt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30280810 66 + 53671032 cgtctctaccaaaaatacaa-aaactagctgggcttggtgacgcatgcctgtagttccagctactct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34734981 66 + 59248254 cgtctctaccaaaaatacaa-aaattagctgggcttggtgacgcatgcctgtagttccagctactct i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5532212 66 + 7714307 cgtctctaccaaaaatacaa-aaattacctgggcttggtgacgcatgcctgtagttccagctactct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29334751 66 + 50890351 tgtctctaccaaaaatacaa-aaattagctgggcttggtgacgcgtgcctgtagttccagctactct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 967621 67 - 2385121 tgtctctactaaaaatacaataaattagctgggcatggtggcgcgtggctgtcatcccagctactca i manLeu1.NW_012102454v1 I 288 C 0 s colAng1.NW_012111697v1 2409521 66 + 4274983 tgtctctaccaaaaatacaa-aaattagctgggcttggtgacgcatgcctgtagttccagctactct i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5545979 55 + 5549422 ---ctgcaacagaagtatag---------ccggcgttgtggcaggtgcttatagtcccagccacttg i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e macNem1.NW_012011689v1 4608396 1219 - 13342542 I e panPan2.chr19 39955475 20 + 64411610 I a score=36261.000000 s hg38.chr19_GL383574v1_alt 144240 9 + 155864 ggaggctga s panTro5.chr19 36211570 9 + 61309027 ggaggctga i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6367174 9 - 8369475 ggaggctga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965738 9 - 106955855 gtaggctga i nomLeu3.chr10 C 0 M 100 s rheMac8.chr19 30280876 9 + 53671032 gggggctga i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34735047 9 + 59248254 ggaggctga i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5532278 9 + 7714307 ggaggctga i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29334817 9 + 50890351 ggaggctga i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 967688 9 - 2385121 ggaggctga i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5546034 9 + 5549422 ggaggctga i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e colAng1.NW_012111697v1 2409587 0 + 4274983 C e macNem1.NW_012011689v1 4608396 1219 - 13342542 I e panPan2.chr19 39955475 20 + 64411610 I a score=97522.000000 s hg38.chr19_GL383574v1_alt 144249 49 + 155864 ggcaagagaatcacttgagctcaggagctcaagaccaggtaggttgcag s panTro5.chr19 36211579 49 + 61309027 ggcaagagaatcgcttgagctcaggagctcaagaccaggtaggttgcag i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6367183 49 - 8369475 ggcaagagaatcgcttgagctcaggagctcaagaccaggtaggttgcag i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30280885 40 + 53671032 ggcaggagaatcgcttgaacctgggag---------gcggaggttgcag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34735056 40 + 59248254 ggcaggagaatcgcttgaacctgggag---------gcggaggttgcag i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5532287 40 + 7714307 ggcaggagaatcgcttgaacctgggag---------gcggaggttgcag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29334826 40 + 50890351 ggcaggagaatcgcttgaacctgggag---------gcggaggttgcag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 967697 40 - 2385121 ggcaggagaatcgcttgaacctgagag---------gcggaggttgcag i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5546043 40 + 5549422 ggcaagagaatcacttaagcccaggag---------tttgaggttgctg i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e colAng1.NW_012111697v1 2409587 0 + 4274983 C e macNem1.NW_012011689v1 4608396 1219 - 13342542 I e nomLeu3.chr10 63965747 100 - 106955855 M e panPan2.chr19 39955475 20 + 64411610 I a score=198886.000000 s hg38.chr19_GL383574v1_alt 144298 57 + 155864 tgagccaggatctcacctctgcactccagcctgagtgacagagcaagattcc-atctc s panTro5.chr19 36211628 58 + 61309027 tgagccaggatctcacctctgcactccagcctgagtgacagagcaagaTTCCAATCTC i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6367232 57 - 8369475 tgagccaggatctcacctctgcactccagcctgagtgacagagcaagattcc-atctc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965849 57 - 106955855 tgagccaggatctcacctctgcactccagcctgagtgacagagcaagattcc-atctc i nomLeu3.chr10 M 100 C 0 s rheMac8.chr19 30280925 57 + 53671032 tgagccaagatctcaccactgcactccagcctgagtgacagagcaagattct-atctc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34735096 57 + 59248254 tgagccaagatctcaccactgcactccagcctgagtgacagagcaagattcc-atctc i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5532327 57 + 7714307 tgagccaagatcgcaccactgcactccagcctgagtgacagagcaagattcc-atctc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29334866 57 + 50890351 tgagccaagatctcaccactgcactccagcctgagtgacagagcaagattcc-atctc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 967737 57 - 2385121 tgagccaagatcgcaccactgcactccagcctgagtgacagagcaagattcc-atctc i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5546083 54 + 5549422 tgagctgtgat---gccatggcactctaccgagggcaacagagtgagactct-gtctc i otoGar3.GL873654 C 0 I 289 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e colAng1.NW_012111697v1 2409587 0 + 4274983 C e macNem1.NW_012011689v1 4608396 1219 - 13342542 I e panPan2.chr19 39955475 20 + 64411610 I a score=179372.000000 s hg38.chr19_GL383574v1_alt 144355 56 + 155864 caaggccaggcatggtggctcatgcctgtaatcccagcactttgggaggccgaggt s panTro5.chr19 36211686 56 + 61309027 CAAggccaggcatggtggctcatgcctgtaatcccagcacttggggaggccgaggt i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6367289 56 - 8369475 caaggccaggcatggtggctcatgcctgtaatcccagcactttgggaggccgaggt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965906 54 - 106955855 caaggccaggcgtggtggctcatgcctgtaatcccagcact--gggaggccgaggt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30280982 56 + 53671032 caaggccaggtgtggtggctcatgcctgtaatcccagcactttgggaggccaaggt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34735153 56 + 59248254 CAAggccaggtgtggtggctcatgcctgtaatcccagcactttgggaggccaaggt i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5532384 56 + 7714307 CAAggccaggtgtggtggctcatgcctgtaatcccagcactttgggaggccaaggt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29334923 56 + 50890351 caaggccaggtgtggtggctcatgcctataatcccagcactttgggaggccaaggt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 967794 56 - 2385121 CAAggccaggtgtggtggctcatgcctgtaatcccagcactttgggaggccaaggt i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e otoGar3.GL873654 5546137 289 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e colAng1.NW_012111697v1 2409587 0 + 4274983 C e macNem1.NW_012011689v1 4608396 1219 - 13342542 I e panPan2.chr19 39955475 20 + 64411610 I a score=178357.000000 s hg38.chr19_GL383574v1_alt 144411 48 + 155864 gggcggatcacaaggtcagaagatcgagaccat-ctggccaacatggtg s panTro5.chr19 36211742 48 + 61309027 gggcggatcacaaggtcagaagatcaagaccat-ctggccaacatggtg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955495 48 + 64411610 gggcggatcacaaggtcagaagatcaagaccat-ctggccagcatggtg i panPan2.chr19 I 20 C 0 s gorGor5.CYUI01015150v1 6367345 48 - 8369475 gggcagatcacaaggtcagaagatcgagaccat-ctggccaacatggtg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63965960 48 - 106955855 gggcggatcacaaggtcagaagatcaagaccat-ctggccaacattgtg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30281038 49 + 53671032 gggcggatcacagggtcagaggatcgagaccatcctggccaacatggtg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34735209 49 + 59248254 gggcggatcacagggtcagaggatcgagaccatcctggccaacatcgtg i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5532440 49 + 7714307 gggcggatcacagggtcagaggatcgagaccatcctggccaacatggtg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29334979 49 + 50890351 gggcggatcacagggtcagaggatcgagaccatcctggccaacatggtg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 967850 48 - 2385121 ggg-ggatcacagggtcagaggatcgagaccatcctggccaacatggtg i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e otoGar3.GL873654 5546137 289 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e colAng1.NW_012111697v1 2409587 0 + 4274983 C e macNem1.NW_012011689v1 4608396 1219 - 13342542 I a score=240145.000000 s hg38.chr19_GL383574v1_alt 144459 72 + 155864 aaa--tccc-gtctccactaaa----tatacaa-aaattagctgggtgtggtggcgcgtgtctgttatcccagctactca s panTro5.chr19 36211790 72 + 61309027 aaa--tccc-atctccactaaa----tatacaa-aaattagctgggtgtggtggcgcgtatctgttatcccagctactca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955543 73 + 64411610 aaaatcccc-atctccactaaa----tatac-a-aaattagctgggtgtggtggcgcgtgtctgttatcccagctactca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6367393 72 - 8369475 aaa--tccc-gtctccactaaa----tatacaa-aaattagctgggtgtggtggcacgtgtctgttatcccagctactca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63966008 72 - 106955855 aaa--tccc-gtctccactaaa----tatacaa-aaattagctgggcatggtggcgcgtgcctgttatcccagctactcg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30281087 66 + 53671032 aaa--ccactgtctctactaaa----aatacaataaattagctg--------ggcgcgtggctgtcatcccagctactca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34735258 66 + 59248254 aaa--ccactgtctctactaaa----aatacaataaattagctg--------ggcgcgtggctgtcatcccagctactca i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5532489 74 + 7714307 aaa--cccctgtctctactaaa----aatacaataaattagctgggcatggtggcgcgtggctgtcatcccagttactca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29335028 74 + 50890351 aaa--cccctgtctctactaaa----aatacaataaattagctgggcatggtggcgcgtggctgtcatcccagctactca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 967898 74 - 2385121 aaa--cccctgtctctactaaa----aatacaataaattagctgggcatggtggcgcgtggctgtcatcccagctactca i manLeu1.NW_012102454v1 C 0 C 0 s otoGar3.GL873654 5546426 76 + 5549422 aaa--ccta-gccctggccaaattgcaacacaa-aaaatagccaggcgttgtagcaggcgcctgtagtcccagctgcttg i otoGar3.GL873654 I 289 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e colAng1.NW_012111697v1 2409587 0 + 4274983 C e macNem1.NW_012011689v1 4608396 1219 - 13342542 I a score=622661.000000 s hg38.chr19_GL383574v1_alt 144531 132 + 155864 ggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgcgccaagatcatgccactgcactccagcct-ggtgacagagctagactctgtctcaaaaaaa----aaa------ataa---aaaaaaGTAAA----TA s panTro5.chr19 36211862 126 + 61309027 ggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttacagtgcgccaagatcatgccactgcactccagcct-ggtgacagagctagactctgtctcaaaaaa----------------aa---ataaaaGTAAA----TA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955616 129 + 64411610 ggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttacagtgcgccaagatcatgctactgcactccagcct-ggtgacagagctagactctgtctcaaaaaa----------------aaattaaaaaaGTAAA----TA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6367465 130 - 8369475 ggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgcgccaagatcatgccactgcactccagcct-ggtgacagagctagactctgtctcaaaaaaa----aaa--------aa---aaaaaaGTAAA----TA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63966080 143 - 106955855 ggaggctgaggcaggagaatcgcttgaacccaggagacagaggttgcagtgagccgagatcatgccactgcactccagcctgggtgacagagctagactctgtcttcaaaaaa----aaaaaaaaaaaaa---aaaaaaGTAAATCTGTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30281153 138 + 53671032 ggaggctgaggcaggagaatagcttgaacccaggaggcggaggttgcagtgagccgagatcatgccactacactccagcct-ggtgacagagctagactctgtctcaaaaaaaattaaaa--------aa---aaaaaaGTAAATCTATA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34735324 138 + 59248254 ggaggctgaggcaggagaatagcttgaacccaggaggcggaggttgcagtgagccgagatcatgccactacactccagcct-ggtgacagagctagactctgtctcaaaaaaaatttaaa--------aa---aaaaaaGTAAATCTATA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5532563 138 + 7714307 ggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagccgagatcatgccactacactccagcct-ggtgacagagctagactctatctcaaaaaaaatttaaa--------aa---aaTAAGGTAAATCTATA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29335102 138 + 50890351 ggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagccgagatcatgccactacactccagcct-ggtgacagagctagactctgtctcaaaaaaaataaaaa--------aa---aaaaaaGTAAATCTTTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 967972 138 - 2385121 ggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagccgagatcatgccactacactgcagcct-ggtgacagagctagactctgtctcaaaaaaaattaaaa--------aa---aaaaaaGTAAATCTATA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2409587 136 + 4274983 ggaggctgaggcaggataatcgcctgaacctgggaggcggaggttgcagtgagccgagatcatgccactgcactccagcct-ggtgacagagctagactctgtctcaaaaaaaTTTTTTT--------TA---A--AAAGTAAATCTATA i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5546502 130 + 5549422 ggaggctgaggcaagagaattgcttgagcccaggagttgtaggttgctgtaagctgtg-tgatgccacagcactctaccaaaggcaataaagtgagactctgttgctacaaaa----aaa--------aa---ataaaaTGAAA----TA i otoGar3.GL873654 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665231 0 - 122678785 C e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e macNem1.NW_012011689v1 4608396 1219 - 13342542 I a score=315106.000000 s hg38.chr19_GL383574v1_alt 144663 59 + 155864 TTAGGTTAAGCCATTTATTTCAGGATTTGTT-ACTGCAGCATA---GCTTGATCTGTCTGCCA s panTro5.chr19 36211988 59 + 61309027 TTAGGTTAAGCCATTTATTTCAGGATTTGTT-ACTGCAGCATA---GCTTGATCTGTCTGCCA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955745 59 + 64411610 TTAGGTTAAGCCATTTATTTCAGGATTTGTT-ACTGCAGCATA---GCTTGATCTGTCTGCCA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6367595 59 - 8369475 TTAGGTTAAGCCATTTATTTCAGGATTTGTT-ACTGCAGCATA---GCTTGATCTGTCTGCCA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63966223 60 - 106955855 TTAGGTTAAGCCATTTATTTCAGGATTTGTTAACTGCAGCATA---GCTCGATCTGTCTGCCA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30281291 59 + 53671032 TTAAGTTAAGTTGTTTATTTCAGGATTTGTT-ACTGCAGCCTA---GCTTGATCTGTCTGCCA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34735462 59 + 59248254 TTAGGTTAAGTTGTTTATTTCAGGATTTGTT-ACTGCAGCCTA---GCTTGATCTGTCTGCCA i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5532701 59 + 7714307 TTAGGTTAAGTTGTTTATTTCAGGATTTGTT-ACTGCAGCCTA---GCTTGATCTGTCTGCCA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29335240 59 + 50890351 TTAGGTTAAGTTGTTTATTTTGGGATTTGTT-ACTGCAGCCTA---GCTTGATCTGTCTGCCA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 968110 59 - 2385121 ATAGGTTAAGTTGTTTATTTCAGGATTTGTT-ACTGCAGCCTA---GCTTGATCTGTCTGCCA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2409723 59 + 4274983 TTAGGTTAAGTTGTTTATTTCAGGATTTGTT-ACTGCAGCCTA---GCTTGATCTGTCTGCCA i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5546632 55 + 5549422 AAAAATTAAGCACTC-------ggcttggtg-cctgtggctcaagtgcctgaggcgccagcca i otoGar3.GL873654 C 0 T 1220 s canFam3.chr1 4665231 59 - 122678785 TTAGGTTAGGCCACTTGATTCAGGATTTGTT-GCAGCAACATC---ACTTAACCTATCTGCCA i canFam3.chr1 C 0 I 35 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e macNem1.NW_012011689v1 4608396 1219 - 13342542 I a score=725610.000000 s hg38.chr19_GL383574v1_alt 144722 134 + 155864 GTTTGAAGTTctgagag--------tcaagatacct---gagtttgattctgagactacatgtggtctagtgcaagacctttaatgtcctgaatcc-cctttttaatatataaattgaagggtttaagttagatgatcatgaaggg s panTro5.chr19 36212047 134 + 61309027 GTTTGAAGTTctgagag--------tcaagatacct---gagtttgattctgagactacatgtggtctagtgcaagacctttaatgtcctgaatcc-cctttttaatatataaattgaagggtttaagttagatgatcatgaaggg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955804 134 + 64411610 GTTTGAAGTTctgagag--------tcaagatacct---gagtttgattctgagactacatgtggtctagtgcaagacctttaatgtcctgaatcc-cctttttaatatataaattgaagggtttaagttagatgatcatgaaggg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6367654 134 - 8369475 GTTTGAAGTTctgagag--------tcaagatacct---gagtttgattctgagactacatgtggtctagtgcaagacctttaatgtcctgaatcc-cctttttaatatataaattgaagggtttaagttagatgatcatgaaggg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63966283 134 - 106955855 GTGTGAAGTTctgagag--------tcaagatacct---gagtttaattctgagactacgtgtggtctagtgcaagacctttaatgtcctgaatcc-ccttttcaatatataaattgaagggtttaaattagatgatcatgaaggg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30281350 134 + 53671032 GTTTGAAGTGTtgagag--------tcaagatacct---gagtttgattctgagactacatgtggtctagtgcaagagctttaatttcctgaatcc-cctttttaatctacaaattgaagggtttaaattagattatcatgaaggg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34735521 134 + 59248254 GTTTGAAGTGTtgagag--------tcaagatacct---gagtttgattctgagactacatgtggtctagtgcaagacctttaatttcctgaatcc-cctttttaatctataaattgaagggtttaaattagattatcatgaaggg i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5532760 134 + 7714307 GTTTGAAGTGTtgagag--------tcaagatacct---gagtttgattctgagactacatgtggtctagtgcaagacctttaatttcctgaatcc-cctttttaatctataaattgaagggtttaaattagattatcatgaaggg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29335299 134 + 50890351 GTTTGAAGTGTtgagag--------tcaagatacct---gagtttgattctgagactacatgtggtctagtgcaagacctttaatttcctgaatcc-cctttttaatctataaattgaagtgtttaaattagattatcatgaaggg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 968169 134 - 2385121 GTTTGAAGTGTtgagag--------tcaagatacct---gagtttgattctgagactacatgtggtgtagtgcaagacctttaatttcctgaatcc-cctttttaatctataaattgaagggtttaaattagattatcatgaaggg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2409782 134 + 4274983 GTTTGAAGTTTtgagag--------tcaagatacct---gagtttgattctgagactacatgtggtctagtgcaagacctttaatttcctgaatcc-cctttttaatctataaattgaagggtttaaattagattatcatgaaggg i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5545467 142 + 5549422 ATGTGTTGAACTGAGAGAAGGGCACTCAAATTTTTTCAATAGCTTGATTTTTAGATta--tgtggtttcgtgtaag-catttagtatcctcagatc-ccccccccatctataaattgaagagttttagttagataaacattaaggg i otoGar3.GL873654 T 1220 C 0 s canFam3.chr1 4665325 110 - 122678785 GTTTGGAGTTCTGGGAG--------TCGAGATGCCC---AGGTCTGACCCTGGCACTC--TGTGGTCTAGAGCTGGGCATTCAGTGTCCTGGGACCATCCCCCTCATCTGTGAATTGAAGGGG----------------------- i canFam3.chr1 I 35 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e macNem1.NW_012011689v1 4608396 1219 - 13342542 I a score=363494.000000 s hg38.chr19_GL383574v1_alt 144856 54 + 155864 cctttttggcacttaacattcACAGATGCTGGATGGCAGCACTCAAATGcagat s panTro5.chr19 36212181 54 + 61309027 cctttttggcacttaacattcACAGATGCTGGATGGCAGCACTCAAATGcagat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955938 54 + 64411610 cctttttggcacttaacattcACAGATGCTGGATGGCAGCACTCAAATGcagat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6367788 54 - 8369475 cctttttggcacttaacattcACAGATGCTGGATGGCAGCACTCAAATGcagat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63966417 53 - 106955855 cctttttggcactt-acattcacagattctGGATGGCAGCACTCAAATGcagat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30281484 53 + 53671032 cctttttgccactt-atattcacagattctGGATGGCAGCACTCACATGcagat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34735655 53 + 59248254 cctttttgccactt-atattcacagattctGGATGGCAGCACTCACATGcagat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4609615 53 - 13342542 CCTTTTTGCCACTT-ATATTCACAGATTCTGGATGGCAGCACTCACATGcagat i macNem1.NW_012011689v1 I 1219 C 0 s cerAty1.NW_012005268v1 5532894 53 + 7714307 cctttttgccactt-atattcacagattctGGATGGCAGCACTCACATGcagat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29335433 53 + 50890351 cctttttgccactt-atattcacagattctGGATGGCAACACTCACATGcagat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 968303 53 - 2385121 cctttttgccactt-atattcacagattctGGATGGCAGCACTCACATGcagat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2409916 53 + 4274983 cctttttggcactt-acattcacagattctGGATGGCAGCACTCACATGcagat i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5545609 53 + 5549422 tctttttggcactT-ATTTTTCCAAATTTTGGATGGTAGCATTTAAATAcagac i otoGar3.GL873654 C 0 C 0 s canFam3.chr1 4665435 53 - 122678785 CCTTTTTGGCACTG-ACATTACTAGATTTTGGTTAGCAGCACTTAAATACAAAT i canFam3.chr1 C 0 I 7 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=385927.000000 s hg38.chr19_GL383574v1_alt 144910 65 + 155864 gttccttgacttatgatgggagtttatgtcctgataaacctctcataagttgaaaatatcctaag s panTro5.chr19 36212235 65 + 61309027 gttccttgacttacgatgggagtttatgtcctgataaacctctcataagttgaaaatatcctaag i panTro5.chr19 C 0 C 0 s panPan2.chr19 39955992 65 + 64411610 gttccttgacttacgatgggagtttatgtcctgataaacctctcataagttgaaaatatcctaag i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6367842 65 - 8369475 gctccttgacttgtgatgggagtttatgtcctgataaatctctcataagttgaaaatatcctaag i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63966470 64 - 106955855 gttccttgacttatgatgggag-ttatgtcctgataaacctctcataagttgaaaatatcctaag i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30281537 64 + 53671032 gttccttgacttatgatggggg-atatgtcctgataaacctctcgtaagttgaaactatcctaag i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34735708 64 + 59248254 gttccttgacttatgatggcgg-ttatgtcctgataaacctctcgtaagttgaaactatcctaag i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4609668 64 - 13342542 gttccttgacttacaatggggg-ttatgtcctgataaacctctcgtaagttgaaactatcctaag i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5532947 64 + 7714307 gttccttgacttatgatggggg-ttatgtcctgataaacctctcgtaagttgaaactatcctaag i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29335486 64 + 50890351 gttccttgacttatgatggggg-ttatgtcctgataaacctctcgtaagttgaaactatcctaag i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 968356 64 - 2385121 gttccttgacttataatggggg-ttatgtcctgataaacctctcgtaagttgaaactatcctaag i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2409969 64 + 4274983 gttccttgacttatgatggggg-ctatgtcctgataaacctctcataagttgaaactatcctaag i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5545662 63 + 5549422 acttctcaacatgtgatgggg--ttacttgctgataagcccatcataaactgaaaatatcgtaag i otoGar3.GL873654 C 0 I 1364 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665488 7 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=1911975.000000 s hg38.chr19_GL383574v1_alt 144975 321 + 155864 ttgaaaatgtaa----ggaccgggcgcagtggctgatgcctgtaattccagcactttgggaggctgaggcaggaggatcgcttgagctcaggagctcaagaccagcctggggaacatggtgaaacccag--ctctataaaaaata-caaaaattaactgggcgtggtgctgtatgcctgtagccccagctactcaggaggctgaggtgggaggatggcttgagcccaggaggcggagcttgcagtgaaccaagattgcaccactgtactccagcctgggtgacagagccagaccctgtctc-aaaaaaa--------a--aagaagaaaagaaaatgca s panTro5.chr19 36212300 323 + 61309027 ttgaaaatgtaa----ggaccgggcgcagtggctgatgcctgtaattccagcactttgggaggctgaggcaggaggatcgcttgagctcaggagctcaagaccagcctggggaacatggtgaaacccag--ctctataaaaaata-caaaaattaactgggcgtggtgctgtatgcctgtagccccagctactcaggagtctgaggtgggaggatggcttgagcccaggaggcggagcttgcagtgaaccaagattgcaccactgtactccagcctgggtgacagagccagaccctgtctc-aaaaaaa--------aagaagaagaaaagaaaatgca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39956057 323 + 64411610 ttgaaaatgtaa----ggaccgggcgcagtggctgatgcctgtaattccagcactttgggaggctgaggcaggaggatcgcttgagctcaggagctcaagaccagcctggggaacatggtgaaacccag--ctctataaaaaata-caaaaattaactgggcgtggtgctgtatgcctgtagcccaagctactcaggaggctgaggtgggaggatggcttgagcccaggaggcggagcttgcagtgaaccaagattgcaccactgtactccagcctgggtgacagagccagaccctgtctc-aaaaaaa--------aagaagaagaaaagaaaatgca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6367907 320 - 8369475 ttgaaaatgtaa----ggactgggtgcagtggctgatgcctgtaattccagcactttgggaggctgaggcaggaggatcgcttgagctcaggagctcaagaccagcctggggaacatggtgaaacccag--ctctataaaaaata-caaaaattaactgggcgtggtgctgtatgcctgtagccccagctactcaggaggctgaggtgggaggatggcttgagcccaggaggcggagcttgcagtgaaccaagattgcaccactgtactccagcctgggtgacagagccagaccctgtctc-aaaaaaa-----------aagaagaaaagaaaatgca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63966534 318 - 106955855 ttgaaaatgtaa----ggaccgggagcagtggctgatgcctgtaattccagcgctttgggaggctgaggcaggaggatcgcttgagctcaggagctcaagaccagcct-gggaacatggtgaaacccag--ctctataaaaaata-caaaaattagctgggcgtggtgctgtgtgcctgtagccccagctactcaggaggctgaggtgggaggatggcttgagcccaggaggtggagcttgcagtgaaccaagatcgcaccactgcactccagcctgggtgacagagccagaccctgtctc-aaaaag------------aagaagagaagaaaatgca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30281601 315 + 53671032 ttgaaaatctaa----gggccaggcacagtgactcatgcttgtaattccaacactttgagaggctgaggcaggaggattgcttgagctcaggagctcgagaccagcctggggaacatggtgaaacccag--------aaaaaata-caaaaattagctgggtgtggtgctgtgtgcctgtagccccagctactcaggaggctgaggtgtaaggatggcttgagcccaggaggcggagcttgcagtgaaccaagatcgcaccactgcactccagcctgggtgacagagccagaccctgtctc-aaaaaaa--------a--aagaagaaaagaaaatgcg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34735772 315 + 59248254 ttgaaaatgtaa----gggccaggcacagtgactcatgcttgtaattccagcactttgggaggctgaggcaggaggattgcttgagctcaggagctcgagaccagcctggggaacatggtgaaacccag--------aaaaaata-caaaaattagctgggtgtggtgctgtgtgcctgtagccccagctactcaggaggctgaggtgtaaggatggcttgagcccaggaggcgaagcttgcagtgaaccaagatcgcaccactgcactccagcctgggtgacagagccagaccctgtctc-aaaaaaa--------a--aagaagaaaagaaaatgcg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4609732 315 - 13342542 ttgaaaatgtaa----gggccaggcacagtgactcatgcttgtaattccagcactttgggaggctgaggcaggaggattgcttgagctcaggagctcgagaccagcctggggaacatggtgaaacccag--------aaaaaata-caaaaattagctgggtgtggtgctgtgtgcctgtagccccagctactcaggaggctgaggtgtaaggatggcttgagcccaggaggcggagcttgcagtgaaccaagatcgcaccactgcactccagcctgggtgacagagccagaccctgtctc-aaaaaaa--------a--aagaagaaaagaaaatgcg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5533011 316 + 7714307 ttgaaaatgtaa----gggccaggcacagtgactcatgcttgtaattccagcactttgggaggctgaggcaggaggattgcttgagctcaggagctcgagaccagcctggggaacatggtgaaacccag--------aaaaaata-caaaaattagctgggtgtggtgctgtgtgcctgtagccccagctactcaggaggctgaggtgtaaggacggcttgagcccaggaggcggagcttgcagtgaaccaagatcgcaccactgctctccagcctgggtgacagagccagaccctgtctcaaaaaaaa--------a--aagaagaaaagaaaatgcg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29335550 315 + 50890351 ttgaaaatataa----gggccaggcacagtgactcatgcttgtaattccagcactttgggaggctgaggcaggaggattgcttgagctcaggagctcgagaccagcgtggggaacatggtgaaacccag--------aaaaaata-caaaaattagctgggtgtggtgctgtgtgcctgtagccccagctactcaggaggctgaggtgtaaggatggcttgagcccaggaggcggagcttgcggtgaaccaagatcgcaccactgcactccagcctgggtgacagagccagaccctgtctc-aaaaaaa--------a--aagaagaaaagaaaatgcg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 968420 316 - 2385121 ttgaaaatgtaa----gggccaggcacagtgactcatgcttgtaattccagcactttgggaggctgaggcaggaggattgcttgagctcaggagctcgagaccagcctggggaacatggtgaaacccag--------aaaaaata-caaaaattagctgggtgtggtgctgtgtgcctgtagccccagctactcaggaggctgaggtgtaaggatggcttgagcccaggaggcggagcttgcagtgaaccaagatcgcaccactgcactccagcctgggtgacagagccagaccctgtctcaaaaaaaa--------a--aagaagaaaagaaaatgcg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2410033 314 + 4274983 ttgaaaatgtaa----gggccaggcgcagtgactcatgcttgtaattccagcactttgggaggctgaggcaggaggattgtttgagctcaggagctcgagaccagcctggggaacgtggtgaaacccag--------aaaaaata-caaaaattagctgggtgtggtgctgtgtgcctgtagccccagctactcaggaggctgaggtggaaggatggcttgagcccaggaggcagagcttgcagtgaattacgatcgcaccactgcactccagcctgggtgacagagccagaccctgtctc--aaaaaa--------a--aaggagaaaagaaaatgcg i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5547089 289 + 5549422 TCGAAATTGTAATGAGTggccaggtgtggcagtgcatgcttgtaatcttggcactctgggaggctgaggcaggtggatagctcaagctcaggagttcgagaccaccctgagcataagaatgagacccccatctctactaaaaatagaaaaaattagctgggcattgtggtgggcac------tcccagctact-gggaagctgaggcaagaggatcgctcaa--ccgatagtttgaggttgctgtgatctgt--------------------------------------gaCTCTGTCTC-aaaataataatgataa--ataaataacagaaaataaa i otoGar3.GL873654 I 1364 I 170 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665488 7 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=178057.000000 s hg38.chr19_GL383574v1_alt 145296 30 + 155864 tttaatattcctaatgtaccaaacgtcata s panTro5.chr19 36212623 30 + 61309027 tttaacattcctaatgtaccaaacgtcata i panTro5.chr19 C 0 C 0 s panPan2.chr19 39956380 30 + 64411610 tttaacattcctaatgtaccaaacgtcata i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6368227 30 - 8369475 tttaatattcctaatgtaccaaacgtcata i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63966852 30 - 106955855 tttaatattcctaatgtaccaaacatcata i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30281916 30 + 53671032 tttaatattcctaatgtaccaaacatcata i rheMac8.chr19 C 0 I 33 s macFas5.chr19 34736087 30 + 59248254 tttaatattcctaatgtaccaaacatcata i macFas5.chr19 C 0 I 3 s macNem1.NW_012011689v1 4610047 30 - 13342542 tttaatattcctaatgtaccaaacatcata i macNem1.NW_012011689v1 C 0 I 33 s cerAty1.NW_012005268v1 5533327 30 + 7714307 tttaatattcctaatgtaccaaacatcata i cerAty1.NW_012005268v1 C 0 I 33 s chlSab2.chr6 29335865 30 + 50890351 tttaatattcctaatgtaccaaacatcata i chlSab2.chr6 C 0 I 33 s manLeu1.NW_012102454v1 968736 30 - 2385121 tttaatattcctaatgtaccaaacatcata i manLeu1.NW_012102454v1 C 0 I 33 s colAng1.NW_012111697v1 2410347 30 + 4274983 tttaatattcctaatgtaccaaacatcata i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e otoGar3.GL873654 5547378 170 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665488 7 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=11997.000000 s hg38.chr19_GL383574v1_alt 145326 7 + 155864 gcttagc s panTro5.chr19 36212653 7 + 61309027 gcttagc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39956410 7 + 64411610 gcttagc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6368257 7 - 8369475 gcttagc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63966882 7 - 106955855 gcttagc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 34736120 7 + 59248254 ccttaac i macFas5.chr19 I 3 I 23 s colAng1.NW_012111697v1 2410377 7 + 4274983 gcttagc i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e otoGar3.GL873654 5547378 170 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e chlSab2.chr6 29335895 33 + 50890351 I e canFam3.chr1 4665488 7 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e manLeu1.NW_012102454v1 968766 33 - 2385121 I e cerAty1.NW_012005268v1 5533357 33 + 7714307 I e macNem1.NW_012011689v1 4610077 33 - 13342542 I e rheMac8.chr19 30281946 33 + 53671032 I a score=458116.000000 s hg38.chr19_GL383574v1_alt 145333 80 + 155864 cttgcctacctgaaatgtgctaagaggacttcactttagcctgcagtttggcaaaatcatctaccacaaagcc--ttttttt-- s panTro5.chr19 36212660 80 + 61309027 cttgcctacctgaaatgtgctaagaggacttcactttagcctgcagtttggcaaaatcatctaccacaaagcc--ttttttt-- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39956417 80 + 64411610 cttgcctacctgaaatgtgctaagaggacttcactttagcctgcagtttggcaaaatcatctaccacaaagcc--ttttttt-- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6368264 80 - 8369475 cttgcctacctgaaatgtgctaagaggacttcactttagcctgcagtttggcaaaatcatctaccacaaagcc--ttttttt-- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63966889 82 - 106955855 cttgcctaccttaaatgtgctaagagcacttcactttagcctacagttcggcaaaatcatctaccacaaagcc--ttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30281979 80 + 53671032 cttgcctaccttaaatgtgctaagagcacttaacttcagcctacagtttggcaaaatcatctaccacaaagcc--ttttttt-- i rheMac8.chr19 I 33 C 0 s macFas5.chr19 34736150 80 + 59248254 cttgcctaccttaaatgtgctaagagcacttaacttcagcctacagtttggcaaaatcatctaccacaaagcc--ttttttt-- i macFas5.chr19 I 23 C 0 s macNem1.NW_012011689v1 4610110 80 - 13342542 cttgcctaccttaaatgtgctaagagcacttaacttcagcctacagtttggcaaaatcatctaccacaaagcc--ttttttt-- i macNem1.NW_012011689v1 I 33 C 0 s cerAty1.NW_012005268v1 5533390 80 + 7714307 cttgcctaccttaaatgtgctaagagcacttaacttcagcctacagtttggcaaaatcatctaccacaaagcc--ttttttt-- i cerAty1.NW_012005268v1 I 33 C 0 s chlSab2.chr6 29335928 82 + 50890351 cttgcctaccttaaatgtgctaagagcacttaacttcagcctacagtttggcaaaatcatctaccacaaagccttttttttt-- i chlSab2.chr6 I 33 C 0 s manLeu1.NW_012102454v1 968799 80 - 2385121 cttgcctaccttaaatgtgctaagagcacttaacttcagcctacagtttggcaaaatcatctaccacaaagcc--ttttttt-- i manLeu1.NW_012102454v1 I 33 C 0 s colAng1.NW_012111697v1 2410384 80 + 4274983 cttgcctaccttaaatgtgctaagagcacttaacttcagcctacagtttggcaaaatcatctaccacaaagcc--ttttttt-- i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e otoGar3.GL873654 5547378 170 + 5549422 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665488 7 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=1692825.000000 s hg38.chr19_GL383574v1_alt 145413 290 + 155864 ctctctctctctcttagagac-----------------------agggttttactc-tgttacccaggctggagtacaagggcacaa--------ttacagatcactgtaacctcaaactcctgggttcaaatgatgctcccacctcagtctctgaaatagctgggactataggtg--------acctggctaatttgaaaaa-tttttttgtagaggtggggtctttctgtgttgcccgggctggtcttgaactcctggcctcaaatgatctttccagcttggcctcccaaagcgttgagattactgttgtaagccaccatgcccagcta s panTro5.chr19 36212740 289 + 61309027 -tctctctctctcttagagac-----------------------agggttttactc-tgttacccaggctggagtacaagggcacaa--------ttacagatcactgtaacctcaaactcctgggttcaagtgatgctcccacctcaccctctgaaatagctgggactataggtg--------acctggctaatttgaaaca-tttttttgtagaggtggggtctttctgtgttgcccaggctggtcttgaactcctggcctcaaatgatctttccagcttggcctcccaaagtgttgagattactgttgtaagccaccatgcccagcta i panTro5.chr19 C 0 C 0 s panPan2.chr19 39956497 290 + 64411610 ttctctctctctcttagagac-----------------------agggttttactc-tgttacccaggctggagtacaagggcacaa--------ttacggatcactgtaacctcaaactcctgggttcaagtgatgctcccacctcaccctctgaaatagctgggactataggtg--------acctggctaatttgaaaca-tttttttgtagaggtggggtctttctgtgttgcccgggctggtcttgaactcctggcctcaaatgatctttccagcttggcctcccaaagtgttgagattactgttgtaagccaccatgcccagcta i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6368344 287 - 8369475 ---tctctctctcttagagac-----------------------agggttttattc-tgttacccaggctggagtacaagggcacaa--------ttacatatcactgtaacctcaaactcctgggttcaagtgatgctcccacctcagcctctgaaatagctgggactataggtg--------acctggctaatttgaaaaa-tttttttgtagaggtggggtctttctgtgttgcccaggctggtcttgaactcctggcctcaaatgatctttccagcttggcctcccaaagtgttgagattactgttgtaagccaccatgcccagcta i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63966971 298 - 106955855 ttttctctctgtcttagaggc-----------------------agggttttaccg-tgttacccaggctggagtacaagggcacaa--------ttacagatcactgtaacctcaaactcttgggttcaagtgatcct-ccacctcagcccctggaatagctgggactataggtgcacaccacacctggctaatttgaaaaattttttttgtagagatggggtctttctgtgttgcccgggctggtcttgaactcctggcctcaaatgatctttccagcttggcctcccaaagtgttgagattaccgttgtaagccaccatgcccagcta i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30282059 293 + 53671032 ---cttttccctcttagaggc-----------------------agggttttactc-tgttacccaggctggagtacaggagcacaa--------ttacagatcactgtaacctcaaactcctgggttcaagtgatcctcccacctcagcctctggaatacctgggactataggtgcataccacacctggctaatttgaaaaa-tttttttgtagaggtggggtcttgctgtgtttcccagactggtgttgaactcctggcctcaaatgatctttccaacttggcctccc--agtgttgagattactgttgtaagccaccaggcccagcca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34736230 295 + 59248254 ---cttttccctcttagaggc-----------------------agggttttactc-tgttacccaggctggagtacaggagcacaa--------ttacagatcactgtaacctcaaactcctgggttcaagtgatcctcccacctcagcctctggaatacctgggactataggtgcataccacacctggctaatttgaaaaa-tttttttgtagaggtggggtcttgctgtgttgcccagactggtgttgaactcctggcctcaaatgatctttccaacttggcctcccaaagtgttgagattactgttgtaagccaccaggcccagcca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4610190 296 - 13342542 ---cttttccctcttagaggc-----------------------agggttttactcttgttacccaggctggagtacaggagcacaa--------ttacagatcactgtaacctcaaactcctgggttcaagtgatcctcccacctcagcctctggaatacctgggactataggtgcataccacacctggctaatttgaaaaa-tttttttgtagaggtggggtcttgctgtgttgcccagactggtgttgaactcctggcctcaaatgatctttccaacttggcctcccaaagtgttgagattactgttgtaagccaccaggcccagcca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5533470 295 + 7714307 ---cttttccctcttagaggc-----------------------agggttttactc-tgttacccaggctggagtacaggagcacaa--------ttacagatcactgtaacctcaaactcctgggttcaagtgatcctcccacctcagcctctggaatacctgggactataggtgcataccacacctggctaatttgaaaaa-tttttttgtagaggtggggtcttgctgtgttgcccagactggtgttgaactcctggcctcacatgatctttccaacttggcctcccaaagtgttgagattactgttgtaagccaccaggcccagcca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29336010 295 + 50890351 ---ttttttcctcttaggggc-----------------------agggttttactc-tgttacccaggctggagtacaggggcacaa--------ttacagatcactgtaacctcaaactcctgggtgcaagtgatcctcccacctcagcctctggaatacctgggactataggtgcataccacacctggctaatttgaaaaa-tttttttgtagaggtggggtcttgctgtgttgcccagactggtgttgaactcctggcctcaaatgatctttccagcttggcctcccaaagtgttgagattactgttgtaagccaccgtgcccagcca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 968879 303 - 2385121 ---cttttccctcttagaggc-----------------------agggttttactc-tgttacccaggctggagtacaggagcacaattacagatttacagatcactgtaacctcaaactcctgggttcaagtgatcctcccacctcagcctctggaatacctgggactataggtgcataccacacctggctaatttgaaaaa-tttttttgtagaggtggggtcttgctgtgttgcccagactggtgttgaactcctggcctcaaatgatctttccaacttggcctcccaaagtgttgagattactgttgtaaaccaccaggcccagcca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2410464 295 + 4274983 ----tttttcctgttagaggc-----------------------agagttttactc-tgttacccaggctggagtacaggggtacaa--------ttacagatcactgtaacctcaaactcctgggttcaagtgatcctcccacctcagcctctggaatagctgggactataggtgcacaccacacctggctaatttgaaaaattttttttgtagaggtggagtcttgctatgttgcccagactggtcttgaactcctggcctcaaataatctttccaacttggcctcccagagtgttgagatgactgttgtaagccaccatgcccagcca i colAng1.NW_012111697v1 C 0 C 0 s otoGar3.GL873654 5547548 264 + 5549422 ----CTCTCTGTTTCATAGGCTGATGTTTTTGttttttgagacaaaagtctcactt-tgttgcccttgatagagtgctgtggca-----------tcctatctcatagcaacctcaaattctggggcttaagtgatcctcttccctcagtttttc-------------------------------------------------attttttatggagatggggtcttactc--ttgctcattctggtcttgaactgctgagctcaagcaatttacccacctcagccttccagagtgctagggtcacaggcatgagccatcatgcctggcTA i otoGar3.GL873654 I 170 N 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665488 7 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=1259536.000000 s hg38.chr19_GL383574v1_alt 145703 263 + 155864 caaagtctattttgtgataaagttataaagaaatttggatcaaaactcaaaacttgaagtatagtttctactgaaagcatattgcttttttttttttttttttttttttttttt-----------tttttttttttttttttttttgagacagagtctcactctgtcacccaggctggagtgtagtggtgtgatcttggttcactgcaacctccgcctcccaggttcaagcgattatcctgccttagcctcccaggtagctgggattacaggtg s panTro5.chr19 36213029 234 + 61309027 caaagtctattttgtgataaagtTAAAAAGAAATTTGgatcaaaactcaaaacttgaagtatagtttctactgaaagcatattg-----------------------------t-----------tttttgtttttttttttttttgagacagagtctcactctgtcacccaggctggagtgtagtggcgtgatcttggttcactgcaacctccgcctcccaggttcaagcgattatcctgcctcagcctcccaggtagctgggattacaggtg i panTro5.chr19 C 0 I 136 s panPan2.chr19 39956787 229 + 64411610 caaagtctattttgtgataaagttaaaaagaaatttggatcaaaactcaaaacttgaagtatagtttctactgaaagcatattg-----------------------------t-----------tttttttttttttttgt-----agacagagtctcactctgtcacccaggctggagtgtagtggcgtgatcttggttcactgcaacctccgcctcccaggttcaagcgattatcctgcctcagccncccaggtagctgggattacaggtg i panPan2.chr19 C 0 I 98 s gorGor5.CYUI01015150v1 6368631 233 - 8369475 caaagtctattttgtgataaagttataaagaaatttggatcaaaactcaaaacttgaagtatagtttctactgaaagcatattg-----------------------------c-----------ttttttttttttttttt-tttgagacagagtctcactctgtcacccaggctggagtgtagtggcgtgatcttggttcactgcaacctccgcctcccaggttcaagcgattatcctgcctcagcctcccaggtagctgggattacaggtg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63967269 231 - 106955855 caaagtctattttgtgataaagttataaagaaatttggatcaaaactcaaaatttgaagtatagtttctactgaaagcatattc-----------------------------c-----------ttttttttttttttttt-ttggagac--agtctcactctgtcactcaggctggagtgtagtggcgtgaccttggctcactgcaacctccgcctcccaggttcaagcgattatcctgcctcagtctcccaggtagctgggattacaggtg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30282352 226 + 53671032 caaagtctattttgtgataaagttataaagaaatttggatcaaaactcaaaatttgaagtatagtttctactaaaagcatattg-----------------------------c------------------tttttttttt-tttgagacagagtctcactctgtcacccaggctggagtgtggtggtgcaatcttggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccaagtcgctgggattacaggca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34736525 226 + 59248254 caaagtctattttgtgataaagttataaagaaatttggatcaaaactcaaaatttgaagtatagtttctactgaaagcatattg-----------------------------c------------------tttttttttt-tttgagacagagtctcactctgtcacccaggctggagtgtggtggtgcaatcttggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccaagtcgctgggattacaggca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4610486 226 - 13342542 caaagtctattttgtgataaagttataaagaaatttggatcacaactcaaaatttgaagtatagtttctactgaaagcatattg-----------------------------c------------------tttttttttt-tttgagacagagtctcactctgtcacccaggctggagtgtggtggtgcaatcttggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccaagtcactgggattacaggca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5533765 230 + 7714307 caaagtctattttgtgataaagttataaagaaatttggatcaaaactcaaaatttgaagtatagtttctactgaaagcatactg-----------------------------c--------------tttttttttttttt-tttgagacagagtctcactctgtcacccaggctggagtgtggtggcgcaatcttggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccaagtcgctgggattacaggcg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29336305 224 + 50890351 caaagtctattttgtgataaagttataaagaaatttggatcaaaactcaaaatttgaagtatagtttctactgaaagcatattg-----------------------------c--------------------tttttttt-tttgagacagagtctcactctgtcacccaggctggagtgtggtggcgcaatcttggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccaagtcgctgggattacaggcg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 969182 244 - 2385121 caaagtctattttgtgataaagttataaagaaatttggatcaaaactcaaaatttgaagtatggtttctactgaaagcatattg-----------------------------ctttttttttttttttttttttttttttt-tttgagacagagtctcactctgtcacccaggctggagtgcagtggtgcaatcttggctcactgcaacctccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtcgctgggattacaggcg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2410759 228 + 4274983 caaagcctattttgtgataaagttataaagaaatttggatcaaaactcaaaatttgaagtatagtttctactgaaagcatattg-----------------------------c----------------tttttttttttt-tttgagacagagtctcactctgtcacccaggctggagtgtggtggcgcaatcttggctcactgcaacctctgcctcccagattcaagcgattctcctgtctcagcctcccaagttgctgggattacaggcg i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665488 7 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=1342475.000000 s hg38.chr19_GL383574v1_alt 145966 241 + 155864 cctgccacaatgcccgactaatttttgtattttttagtagatacgagc-tttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccacctcagcctcccaaagtgctgggatcacaggtgtgagccaccgcgcccagccgcatattgcttttttaccattgtaaagtagcaaaactgtaagtcaagcca-ttgtaagtcaggaac--------------cACGTGCACACTTTTCTGATT s panTro5.chr19 36213399 241 + 61309027 CCTgccacaattcccgactaatttttgtattttttagtagatacgagc-tttcaccatgttggccaggctggtctcaaactcctgacctcaggcgatccacccacctcagcctcccaaagtgctgggatcacaggtgtgagccaccgcgcccagctgcatattgcttttttaccattgtaaagtagcaaaactgtaagtcaagcca-ttgtaagtcaggaac--------------catgtgCACACTTTTCTGATT i panTro5.chr19 I 136 C 0 s panPan2.chr19 39957114 239 + 64411610 CCTgccacaattcccgactaatttttgtattttttagtagatacgagc-tttcaccatgttggccaggctggtctcaaactcctgacctcaggcgatccacccacctcagcct-ccaaagtgctgggatcacaggtgtgagccaccgcgcccagctgcatattgc-tttttaccattgtaaagtagcaaaactgtaagtcaagcca-ttgtaagtcaggaac--------------catgtgCACACTTTTCTGATT i panPan2.chr19 I 98 C 0 s gorGor5.CYUI01015150v1 6368864 242 - 8369475 cctgccacaatgcccgactaatttttgtattttttagtagatacgagc-tttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccacctcagcctcccaaagtgctgggatcacaggtgtgagccactgcgcccagccgcatattgcttctttaccattgtaaagtagcaaaactgtaagtcaagccgtttgtaagtcaggaac--------------cACGTGCACACTTTTCTGATT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63967500 240 - 106955855 cctgccacaatgccagactaagttttgtattttttagtagagacgagg-tttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatctacccacctcggcctcccaaagtgctgggatcgcaggcgtgagccactgtgcccagccgcatattgcttttttaccattgtaaagtagcaaaactgtaagtcaagcca--tgtaagtcaggaac--------------catgtgTACACTTTTCTGATT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30282578 241 + 53671032 tctgccaccacgcctggctactttttgtattttttagtagagacgagg-ttttgccatgttggcaaggctggtctcaaactcctgacctcaggtgatccacccgcctcagccttccaaagtgctgggatcacagacatgagccactgcgcccagctgcatattccttttttacctttgtaaagtagcaaaactgtaagtcaagcca-ctgtaagtcaggaac--------------catgtgTACACTTTTCTGATT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34736751 242 + 59248254 tctgccaccacgcctggctaatttttgtattttttagtagagacgaggtttttaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccgcctcagccttccaaagtgctgggatcacagacatgagccactgcgcccagctgcatattccttttttacctttgtaaagtagcaaaactgtaagtcaagcca-ctgtaagtcaggaac--------------catgtgTACACTTTTCTGATT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4610712 241 - 13342542 tctgccaccacgcctggctaatttttgtattttttagtagagacgagg-ttttaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccgcctcagccttccaaagtgctgggatcacaggcatgagccactgcgcccagctgcatattccttttttacctttgtaaagtagcaaaactgtaagtcaagcca-ctgtaagtcaggaac--------------catgtgTACACTTTTCTGATT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5533995 241 + 7714307 tctgccaccacgcctggctaatttttgtattttttagtagagacgagg-ttttaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccgcctcagccttccaaagtgctgggatcacaggcatgagccactgcacccagctgcatattccttttttacctttgtaaagtagcaaaactgtaagtcaagcca-ctgtaagtcaggaac--------------catgtgTACACTTTTCTGATT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29336529 241 + 50890351 tctgccaccacgcctggctaatttttgtattttttagtagggacgagg-tttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccacctcagccttccaaagtgctgggatcacaggcatgagccactgagcccagctgcatattccttttttacctttgtaaagtagcaaaactgtaagtcaagcca-cggtaagtcaggaac--------------catgtgTACACTTTTCTGATT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 969426 241 - 2385121 tctgccaccacgcctggctaatttttgtattttttagtagagacgagg-ttttaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccgcctcagccttccaaagtgctgggatcacaggcatgagccactgcgcccagctgcatattccttttttacctttgtaaagtagcaaaactgtaagtcaagcca-ctgtaagtcaggaac--------------catgtgTACACTTTTCTGATT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2410987 255 + 4274983 cctgccaccatgcccagctaatttttgtattttttagtagagacgagg-tttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccacctcagccttccaaagtgcggggatcacaggcgtgagccactgcgcccagctgcgtattccttttttacttttgtaaagtagcaaaactgtaagtcaagcca-ctgtaagtcaggaacTTACAGTGTACACTTTTGTGTACACTTTTCTGATT i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665488 7 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=822504.000000 s hg38.chr19_GL383574v1_alt 146207 131 + 155864 GATGTACAAAAAGGAGACTAAGTCTGGCACTAAAGTCATCCCTGGAAAACTTATTTATTATTAT-TAGTTTTTGCTATTAAATGAGAAGTTAGTTATGTGAAGAAAGTGACAAAGA----TGAAGTAATACTTTTT- s panTro5.chr19 36213640 135 + 61309027 GATGTACAAAAAGGAGACTAAGTCTGGCACTAAAGCCATCCCTGGAAAACTTATTTATTACTAT-TAGTTTTTGCTATTAAATGAGAAGTTAGTTCTGTGAAGAAAGTGACAAAGAAAGATGAAGTAATACTTTTT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39957353 135 + 64411610 GATGTACAAAAAGGAGACTAAGTCTGGCACTAAAGCCATCCCTGGAAAACTTATTTATTACTAT-TAGTTTTTGCTATTAAATGAGAAGTTAGTTCTGTGAAGAAAGTGACAAAGAAAGATGAAGTAATACTGTTT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6369106 135 - 8369475 GATGTACAAAAAGGAGACTAAGTCTGGCACTAAAGCCATCCCTGGAAAACTTATTTATTATTAT-TAGTTTTTGCTATTAAATGAGAAGTTAGTTATGTGAAGAAAGTGACAAAGAAAGATGAAGTAATACTTTTT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63967740 128 - 106955855 GATGTACAAAAAGGAGACTAAATCTGGCATTAAAGCCGTCCCTGGAAAAC---TTTATTATTGT-TAGGTTTTGCTATTAAATGAGAAGTTAGTTATGTGAAGAAAGTGACAAAGA----TGAAGTAATACTTTTT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30282819 135 + 53671032 GACGTACAAAAAGGAGACTAAGTCTGGCACTAAAGCCATCCCTGGAAAACTTATTTATTATTAT-TAGTTTTTGCTATTAAATGAGAAGTTAGTTATGTGAAGAAAATGACAAAGAAAGATGAAGTAATACTTTTT- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34736993 135 + 59248254 GACGTACAAAAAGGAGACTAAGTCTGGCACTAAAGCCATCCCTGGAAAACTTATTTATTATTAT-TAGTTTTTGCTATTAAATGAGAAGTTAGTTATGTGAAGAAAATGACAAAGAAAGATGAAGTAATACTTTTT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4610953 135 - 13342542 GACGTACAAAAAGGAGACTAAGTCTGGCACTAAAGCCATCCCTGGAAAACTTATTTTTTATTAT-TAGTTTTTGCTATTAAATGAGAAGTTAGTTATGTGAAGAAAATGACAAAGAAAGATGAAGTAATACTTTTT- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5534236 135 + 7714307 GACGTACAAAAAGGAGACTAAGTCTGGCACTAAAGCCATCCCTGGAAAACTTATTTATTATTAT-TAGTTTTTGCTATTAAATGAGAAGTTAGTTATGTGAAGAAAGTGACAAAGAAAGATGAAGTAATACTTTTT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29336770 135 + 50890351 GATGTACAAAAAGGAGACTAAGTCTGGCACTAAAGCCATCCCTGGAAAACTTATTTATAATTAT-TAGTTTTTGCTATTAAATGAGAAGTTAGTTATGTGAAGAAAGTGACAAAGAAAGATGAAGTAATACttttt- i chlSab2.chr6 C 0 I 209 s manLeu1.NW_012102454v1 969667 135 - 2385121 GACGTACAAAAAGGAGACTAAGTCTGGCACTAAAGCCATCCCTGGAAAACTTATTTATTATTAT-TAGTTTTTGCTATTAAATGAGAAGTTAGTTATGTGAAGAAAGTGACAAAGAAAGATGAAGTAATACTTTGT- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2411242 135 + 4274983 GATGTACAAAAAGGAGACTAAGTCTGGCACTAAAACCATCCCTGGAAAACTttattattattat-tagtttttgctattaAATGAGAAGTTAGTTATGTGAAGAAAGTGACAAAGAAAGATGAAGTAATACTTTTT- i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4665495 127 - 122678785 GAAGTGGGAACAGGAGACTAAGGGTGGCATTAAAGGTGTCCCTGGGAGACTTGTTCTTTATTATGTACCTTCTGCTGGCAAAT---AAGTTA--CATAAGGAGAAAATGGCAATGAAAGATGAA-----ACTTTttt i canFam3.chr1 I 7 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=298640.000000 s hg38.chr19_GL383574v1_alt 146338 46 + 155864 TAAAAATTAGTTTTATTGAGATATAATTCACATAATTagtttattt s panTro5.chr19 36213775 46 + 61309027 TAAAAATTAGTTTTATTGAGATATAATTCACATAATTagtttattt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39957488 46 + 64411610 TAAAAATTAGTTTTACTGAGATATAATTCACATAATTagtttattt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6369241 46 - 8369475 TAAAAATTAGTTTTATTGAGATATAATTCACATAATTagtttattt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63967868 46 - 106955855 TAAAAATTAGTTTTATTGAGATATAATTCACATAATTagtttattt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30282954 46 + 53671032 TAAAAATTAGTTTTATTGAGATATAATTCACATAATTagtttattt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34737128 46 + 59248254 TAAAAATTAGTTTTATTGAGATATAATTCACATAATTagtttattt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4611088 46 - 13342542 TTAAAATTAGTTTTATTGAGATATAATTCACATAATTagtttattt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5534371 46 + 7714307 TAAAAATTAGTTTTATTGAGATATAATTCACATAATTagtttattt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29337114 46 + 50890351 TAAAAATTAGTTTTATTGAGATATAATTCACATGATTagtttattt i chlSab2.chr6 I 209 C 0 s manLeu1.NW_012102454v1 969802 46 - 2385121 TAAAAATTAGTTTTATTGAGATATAATTCACATAATTagtttattt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2411377 46 + 4274983 TAAAAATTAGTTTTATTGAGATATAATTCACATAATTagtttattt i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4665622 46 - 122678785 ttaaaggcagctttattgagatacagttcatataccatatgtattt i canFam3.chr1 C 0 I 501 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=4532944.000000 s hg38.chr19_GL383574v1_alt 146384 801 + 155864 ggctcatggttctgggaagtccaaggtcatggcattggcatctggtgagggccttcttactgcatcaccccaaggcgaaaggt----ggaaggacaggagagctcaagagagcaagagatggttgaacttctgtaacagattcactctcacaataaattaaaccactcctgtgataatgccattaatctattcaggaggacaagagccttcatgacctaatcatctcttacaggtctcacgtctatacactattgcactggggattaagtttccaatacaagaactttggatgacatttcaagccatagcaaccactatttaacttcagaacattttcatcactcccca-gaaaagctgtacac---attagcaaggactcctcattccataaatctac-----tttttttttttttttt--------------gagacagagtctcactctctcgcccaggctggagtacagtggcaccatcttggctcactgcaccctt-------cacctccaggttcaagtgattcttctgcctcagcctcctaaatagctgggattacaggcatgtgccaccatacctggctaa-ttttttttgtatttttagtagagacgggg-ttttaccatgttggccaggctggtctcaaatgcctggcctcaagtgatctg-cccccctt-----ggcctcccaaagtgttgggattacaggcgtgagccaccgcacccgcccagatctacttttttatctgtgtagattgcctattctagacatttcatatcagtagactcatacaataggagtctccttgtctggcttctttcacttagcacagtgttttt s panTro5.chr19 36213821 815 + 61309027 ggctcatgtttgtgggaagtccaaggtcatggcattggcatctggtgagggccttcttactgcatcaccccaaggcgaaaggt----ggaaggacaggagagctcaagagagcaagagatggttgaacttctgtaacagattcactctcacaataaactaaaccactcctgtgataatgccattaatctattcaggaggacaagagccttcatgacctaatcatctcttacaggtctcacctctatacactattgcactggggattaagtttccaatacaagaactttggatgacatttcaagccatagcaaccactatttaacttcagaacattttcatcactcccca-gaaaagctgtacac---attagcaaggactcctcattccataaatctac-----ttttttttttttttttttttttttttttttgagacagagtctcactctctcgcccaggctggagtacagtggcaccatcttggctcactgcaccctt-------cacctccaggttcaagtgattcttctgcctcagcctcctaaatagctgggattacaggcatgtgccgccatacctggctaa-ttttttttgtatttttagtagagacgggg-ttttaccatgttggccaggctggtctccaatgcctggcctcaagtgatcta-accccctt-----ggcctcccaaagtgttgggattacaggcgtgagccaccgcacccgcccagatctacttttttatttgtgtagattgcctattctagacatttcatatcagtagactcatataataggagtctccttgtctggcttctttcacttagcacagtgttttt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39957534 798 + 64411610 ggctcatgtttgtgggaagtccaaggtcatggcattggcatctggtgagggccttcttactgcatca-cccaaggcgaaaggt----ggaaggacaggagagctcaagagagcaagagatggttgaacttctataacagattcactctcacaataaactaaaccactcctgtgataatgccattaatctattcaggaggacaagagccttcatgacctaatcatctcttacaggtctcacctctatacactattgcactggggattaagtttccaatacaagaactttggatgacatttcaagccatagcaaccactatttaacttcagaacattttcatcactccccacgaaaagctgtacac---attagcaaggactcctcattccataaatc-ac-----tttttttttttttttg--------------tagacagagtctcactctctcgcccaggctggagtacagtggcaccatcttggctcactgcaccctt-------cacctccaggttcaagtgattcttctgcctcagcctcctaaatagctgggattacaggcatgtgccgccatacctggctaa--tttttttgtatatttagtagagacgggg-ttttaccatgttggccaggctggtctccaatgcctggcctcaagtgatcta-a-cccctt-----ggcctcccaaagtgttgggattacaggcgtgagccaccgcacccacccagatctacttttttatttgtgtagattgcctattctagacatttcatatcagtagactcatataataggagtctccttgtctggcttctttcacttagcacagtgttttt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6369287 812 - 8369475 gcctcatggttctgggaagtccaaggtcatggcattggcatctggtgagggccttcttactgcatcaccccaaggcgaaaggt----ggaaggacaggagagctcaagagagcaagagatggttgaacttctgtaacagattcactctcacaataaactaaaccactcctgtgataatgccattaatctattcaggaggacaagagccttcatgacctaatcatctcttacaggtctcacctctatacactattgcactggggattaagtttccaatacaagaactttggatgacatttcaagccatagcaaccactatttaacttcagaacattttcatcactcccca-gaaaagctgtacacattattagcaaggactcctcattctataaatctac-----tttttttttttttttt------ttttttttgagacagagtctcactctctcacccaggctggagtacagtggcaccatcttggctcactgcaccctt-------cacctccaggttcaagtgattcttctgcctcagcctcctaaatagctgggattacaggcatgtgccgccatacctggctaa-ttttttttgtatttttagtagagacgggg-ttttaccatgttggccaggctggtctcgaatgcctggcctcaagtgatctg-cccccctt-----ggcctcccaaagtgttgggattacaggcgtgagccaccacacccgcccagatctacttttttatttgtgtagattgcctactctagacatttcatatcagtagactcatataataggagtctccttgtctggcttctttcacttagcacagtgttttt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63967914 809 - 106955855 ggctcatggttctgggaagtccaaggtcatggcactggcatctggtgagggccttcttggtgcatcaccccaaggcgaaaggt----ggaaggacaggagagctcaagagagcaagagatggttgaacttctgtaacagattcactctcacaataaactaaaccactcctgtgataatgccattgatctgttcaggaggataagagccttcatgacctaatcatctcttacaggtctcacctctatacactattgcactggggattaagtttccaatacaagaactttggatgacatttcaagccatagcaaccactatttaacttcagaacattttcatcacccccca-gaaaagctgtacac---attagcaaggactcctcattccataaatcttt-----tttttttttttttttt------------ttgagatggagtgtcactgtcttgcccaggctggagtacagtggcaccatcttggctcactgcaccctc-------cacctccaggttcaagtgattcttctgcctcagcctcctgaatagctgggattataggcatgtgcctccatacctggctaa-ttttttttgtatttttaatagagacggggtttttaccatgttggccagtctgggcttgaactcctggcctcaagtgatctg-cccgactctagaggatcccacaaagtgttgggatgacaggcgtgagccaccgcacccagccagatctacttttttatttgtgtagattacctattctagacatttcatatcagtagactcatataataggagtctccttgtctggcttctttcacttagcacagtgttttt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30283000 807 + 53671032 ggctcatggttctgggaagttcaaggtcatggcactggcatctggtgagggccttcttgctgcgtc--cccaaggtgaaaggt----ggaaggacaggagagctcaagagagcaaggcaggattgaacttctgtaacagattcactctcacaataaattaaaccactcctgtgataatgccattagtctattcaggaggacaagagccttcaggacctaatcatctcttacaggtctcacctctataaactattgcactggggattaagtttccaatacaagagctttgggtgatgtttcaagccatagcaaccactatttaacttcagaacattttcatcagccccca-gaaaagctgtacac---attagcaaggactcctcattccacaaatctac----ttttttttttttttttt--------------gagacagattctcactctcttgcccaggctggagtacagtggcaccatcttgactcactgcaccctccaccctccacctccaggttcaagtgattcttctgcctcagcctcctgaatagctgggattacaggcatgtgctgccacacccggctaa-ttgtttttgcatttttagtagagacgggg-ttttaccatgttggccaggctggtcttgaactcctggcctcaagtgatctg-cccccctt-----ggcctcccaaagtgttgggattacaggcgtgagccaccacacccggccagatctacttttttatttgtataggttgcctattctgggcatttcatatcagtagactcatataatagaagtctcctcatctggcttctttcgcttagcgcagtgttttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34737174 807 + 59248254 ggctcatggttctgggaagttcaaggtcatggcactggcatctggtgagggccttcttgctgcgtc--cccaaggtgaaaggt----ggaaggacaggagagctcaagagagcaaggcaggattgaacttctgtaacagattcactctcacaataaattaaaccactcctgtgataatgccattagtctattcaggaggacaagagccttcaggacctaatcatctcttacaggtctcacctctataaactattgcactggggattaagtttccaatacaagagctttgggtgatgtttcaagccatagcaaccactatttaacttcagaacattttcatcagccccca-gaaaagctgtacac---attagcaaggactcctcattccacaaatctac----ttttttttttttttttt--------------gagacagattctcactctcttgcccaggctggagtacagtggcaccatcttgactcactgcaccctccaccctacacctccaggttcaagtgattcttctgcctcagcctcctgaatagctgggattacaggcatgtgctgccacacccggctaa-ttgtttttgcatttttagtagagacgggg-ttttaccatgttggccaggctggtcttgaactcctggcctcaagtgatctg-cccccctt-----ggcctcccaaagtgttgggattacaggcgtgagccaccacacccggccagatctacttttttatttgtataggttgcctattctgggcatttcatatcagtagactcatataataggagtctcctcatctggcttctttcgcttagcgcagtgttttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4611134 801 - 13342542 ggctcatggttctgggaagttcaaggtcatggcactggcatctggtgagggccttcttgctgcgtc--cccaaggtgaaaggt----ggaaggacaggagagctcaagagagcaaggcaggattgaacttctgtaacagattcactctcacaataaattaaaccactcctgtgataatgccattagtctattcaggaggacaagagccttcaggacctaatcatctcttacaggtctcacctctataaactattgcactggggattaagtttccaatacaagagctttgggtgatgtttcaagccatagcaaccactatttaacttcagaacattttcatcagccccca-gaaaagctgtacac---attagcaaggactcctcattccacaaatctcc--------ttttttttttttt--------------gagacagattctcactctcttgcccaggctggagtacagtggcaccatcttgactcactgcaccctccaccctccacctccaggttcaagtgattcttctgcctcagcctcctgaatagctgggattacaggcatgtgccgccacacccggctaa-ttgtttttgcatttttagtagagacgggg-ttttaccatgttggccaggctggtcttgaactcctggcctcaagtgatctg-cccccctt-----ggcctcccaaagtgttgggattacaggcgtgagccaccacacccggccagatctacttttttatttgtataggttgcctattctgggcatttcatatcagtagactc--ataataggagtctcctcatctggcttctttcgcttagcgcagtgttttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5534417 805 + 7714307 ggctcatggttctgggaagttcaaggtcatggcactggcatctggtgagggccttcttgctgcatc--cccaaggcgaaaggt----ggaaggacaggagagctcaagagagcaagacaggattgaacttctgtaacagattcactctcacaataaactaaaccactcctgtgataatgccattagtctattcaggaggacaagagccttcaggacctaatcatctcttacaggtctcacctctataaactattgcactggggattaagtttccaatacaagagctttgggtgatatttcaagccatagcaaccactatttaacttcagaacattttcatcagccccca-gaaaagctgtacac---attagcaaggactcctcattccacaaatctac------ttttttttttttttt--------------gagacagattctcactctcttgcccaggctggagtacagtggcaccatcttgactcactgcaccctccaccctccacctccaggttcaagtgattcttctgcctcagcctcctgaatagctgggattacaggcatgtgctgccacacccggctaa-ttgtttttgcatttttagtagagacgggg-ttttaccatgttggccaggctggtcttgaactcctggcctcaagtgatctg-cccccctt-----ggcctcccaaagtgttgggattacaggcgtgagccaccacacccggccagatctacttttttatttgtataggttgcctattctgggcatttcatatcagtagactcatataataggagtctcctcatctggcttctttcgcttagcacagtgttttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29337160 809 + 50890351 ggctcatggttctgggaagttcaaggtcatggcactggcatctggtgagggccttcttgctgcatc--cccaaggcaaaaggt----ggaaggacaggagagctcaagagagcaagacaggattgaacttctgtaacagattcactctcacaataaactaaaccactcctgtgataatgccattggtctattcaggaggacaaaagccttcaggacctaatcatctcttacaggtctcacctctataaactattgcactggggattaagtttccaatacaagagctttgggtgatgtttcaacccatagcaaccactatttaacttcagaacattttaatcagccccca-gaaaagctgtacac---attagcaaggactcctcattccacaaatctac-tttttttttttttttttttt--------------gagacagattctcactctcttgcccaggctggagtacagtggcaccatcttgactcactgcaccctccaccctccacctccaggttcaagtgattcttctgcctcagcctcctgaatagctgggattacaggcatgtgccgccacacccggctaa-ttgtttttgcatttttagtagagacgggg-ttttaccatgttggccaggctggtcttgaactcctggcctcaagtgatctgccccccccc-----ggcctcccaaaatgttgggattacaggcgtgagccaccacactcggccagatctacttttttatttgtataggttgcctgttctgggcatttcatatcagtagactcatataataggagtctcctcatctggcttctttcgcttag--cagtgttttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 969848 803 - 2385121 ggctcatggttctgggaagttcaaggtcatggcactggcatctggtgagggccttcttgctgcatc--cccaaggcgaaaggt----ggaaggacaggagagctcaagagagcaagacaggattgaacttctgtaacagattcactctcacaataaactaaaccactcctgtgataatgccattagtctattcaggaggacaagagccttcaggacctaatcatctcttacaggtctcacctctataaactattgcactgaggattaagtttccaatacaagagctttgggtgatgtttcaagccatagcaaccactatttaacttcagaacattttcatcagccccca-gaaaagctgtacac---attagcaaggactcctcattccacaaatctac--------ttttttttttttt--------------gagacagattctcactctcttgcccaggctggagtacagtggcaccatcttgactcactgcaccctccaccctccacctccaggttcaagtgattcttctgcctcagcctcctgaatagctgggattacaggcatgtgctgccacacccggctaa-ttgtttttgcatttttagtagagatgggg-ttttaccatgttggccaggctggtcttgaactcctggcctcaagtgatctg-cccccctt-----ggcctcccaaagtgttgggattacaggcgtgagccaccacacccggccagatctacttttttatttgtataggttgcctattctgggcatttcatatcagtagactcatataataggagtctcctcatctggcttctttcgcttagcacagtgttttt i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2411423 817 + 4274983 ggctcatggttctggaaagttcaaggtcatggcactggcatctggtgagggccttcttgctgcatc--cccaaggcgaaaggtggaaggaaggacaggagagctcaagagagcaagacaggattgaacttctgtaacagattcactctcacaataaactaaaccactcctgtgataatgccattagtctattcaggaggacaagagccttcatgacctaatcatctcttacaggtctcacctctgtaaactattgcactagggattaagtttccaatacaagaactttgggtgatgtttcaagccatagcaaccactatttaacttcagaacattttcatcacccccca-gaaaagctgtacac---attagcaaggactcctcattccacaaatctacctttttttttttttttttttg--------------gagacagattctcactctctcgcccaggctggagtacagtggcaccatcctggctcactgcaccctccaccctccacctccaggttcaagtgattcttctgcctcagcctcctgaatagctgggattacaggcatgtgccgccacacctggctaatttttttttgcatttttagtagagacgggg-ttttaccatgttggccaggctggtcttgaagtcctagcctcaagtgatctaccccccctt-----ggcctcccaaagtgttgggattacaggtgtgagctgccacacccggccagatctacttttttatttgtataggttgcctattctgggcatttcatatcagtagactcatataataggagtctccttgtctggcttctttcgcttagcacagtgttttt i colAng1.NW_012111697v1 C 0 I 773 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665668 501 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=2086686.000000 s hg38.chr19_GL383574v1_alt 147185 459 + 155864 aaggttcgtccatattgtagcatttatcagaacctcattcctttttatagttgaataaataatccattatatgtctgtactacatttgtttattcatttgtcagttgataagcaattgggtcgtta-ctacttttgactattatgaataatgctgctatgaacatttgtgtgcaggtttttgtttggacatatttcttcgtttctcttgggtatatacataggaatgaaattgctgggttatgtggtaacactatatttagca-ttttgaggacctgccaaactgttccatagtagctatcccattttac---tttatttttttttt-------------------gagacagcgtctcactctgttacccaggctggagcacagtggcacgatttcggctcattgcaacctctgcctcctgg-ttcaaccaattctcctgcctcagcctcctgaatagttgggattacaggcatgtgccacca s panTro5.chr19 36214636 475 + 61309027 aaggttcatccatattgtagcatttatcagaacctcattcctttttatagttgaataaataatccattgtatgtctgtactacatttgtttattc----gtcagttgataagcaattgggttgtta-ctacttttgactattatgaataatgctgctatgaacatttgtgtgcaggtttttgtttggacatatttcttcgcttctcttgggtatatacataggaatgaaattgctgggttatgtggtaacactatatttagca-ttttgaggacctgccaaactgttccatagtggctatcccattttac---tttctttttttttttttttttttttttttttttgagacagcgtctcactctgttacccaggctggagcacagtggcacgatttcggctccttgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgaatagttgggattacaggcatgtgccacca i panTro5.chr19 C 0 C 0 s panPan2.chr19 39958332 465 + 64411610 aaggttcatccatattgtagcatttatcagaacctcattcctttttatagttgaataaataatccattgtatgtctgtactacatttgtttattc----gtcagttgataagcaattgggttgtta-ctacttttgactattatgaataatgctgctatgaacatttgtgtgcaggtttttgtttggacatatttcttcgcttctcttgggtatatacataggaatgaaattgctgggttatgtggtaacactatatttagca-ttttgaggacctgccaaactgttccatagtggctatcccattttac---tttctttttttttt----------ttttttttgtagacagcgtctcactctgttacccaggctggagcacagtggcacgatttcggctccttgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgaatagttgggattacaggcatgtgccacca i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6370099 462 - 8369475 aaggttcatccatattgtagcatttatcagaacctcattcctttttatagttgaataaataatccattgtatgtctgtactacatttgtttattcatttgtcagttgataagcaattgggtcgtta-ctacttttgactattatgaataatgctgctatgaacatttgtgtgcaggtttttgtttggacatatttcttcgtttctcttgggtatatacataggaatgaaattgctgggttatgtggtaacactatatttagcatttttgaggacctgccaaactgttccatagtggctatcccattttac---tttctttttttttt------------------tgagacagcgtctcactctgttacccaggctggagcacagtggcacgatttcagctcattgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgaatagttgggattacaggcatgtgccacca i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63968723 462 - 106955855 aaggttcatccatattgtagcatttatcagaacctagttcctttttatagttgaataaataatccattgtatgtctgtgctacatttgtttattcatttctcagttgataaacaattgggttgtta-ctacttttgactattacgaataa---tgctatgaacatttgtgtgcaggtttttgttgggacatatttcttcatttctctcgggtatatacataggaatgaaattgctgggtcatgtgataacactatatttagca-ttttgaggacctgccaaactgttccacagtggctatcccattttac---tttcttttttgttt--------------tttttgagacagcatctcactctgttacccgggctggagcatagtggcacgattttggctcattgcaacctctgcctcctgagttcaagcaattctcctgcctcagcctcctgaatagttaggattacaggcatgtgccacca i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30283807 463 + 53671032 aaggttcatccatattgtagcatttatcagaacctcattcctttttatagttg----aataatccattgtatgtc--tactacatttgttt----atttgtcagttgataaagagttgggtcgttagctacttttgactgttatgaagaatgctgctatgaacatttgtgtgcaggtttttgtttggacatatttctccatttctcttgggtgtatacataggaatgaaattgctgggtcatgtgataacactatatttagca-ttttgaggacctgccaaactactccacagtggctatcccattctacttttttttttttttttt----------tttttttttgagacaacgtcttgctctgttacccaggctggagcacagtggcatgatttcgacttattgcaacctctgcctcctgggttcaagcagttctcttgcctcagcctcctgaatagttgggattacaggcatgtgccgcca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34737981 463 + 59248254 aaggttcatccatattgtagcatttatcagaacctcattcctttttatagttg----aataatccattgtatgtc--tactacatttgttt----atttgtcagttgataaagagttgggtcgttagctacttttgactgttatgaagaatgctgctatgaacatttgtgtgcaggtttttgtttggacatatttctccatttctcttgggtgtatacataggaatgaaattgctgggtcatgtggtaacactatatttagca-ttttgaggacctgccaaactactccacagtggctatcccattctacttttttttttttttttt----------tttttttttgagacaacgtcttgctctgttacccaggctggagcacagtggcatgatttcgacttattgcaacctctgcctcctgggttcaagcagttctcttgcctcagcctcctgaatagttgggattacaggcatgtgccgcca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4611935 460 - 13342542 aaggttcatacatattgtagcatttatcagaacctcattcctttttatagttg----aataatccattgtatgtc--tactacatttgttt----atttgtcagttgataaagagttgggtcgttagctacttttgactgttatgaagaatgctgctatgaacatttgtgtgcaggtttttgtttggacatatttctccatttctcttgggtgtatacataggaatgaaattgctgggtcatgtggtaacactatatttagca-ttttgaggacctgccaaactactccacagtggctatcccattctac---tttttttttttttt----------tttttttttgagacaacgtcttgctctgttacccaggctggagcacagtggcatgatttcgacttattgcaacctctgcctcctgggttcaagcagttgtcttgcctcagcctcctgaatagttgggattacaggcatgtgccgcca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5535222 464 + 7714307 aaggttcatccatattgtagcatttatcagaacctcattcctttttatagttg----aataatccattgtatgtc--tactacatttgtttattcatttgtcagttgataaagagttaggtcgttagctccttttgactgttatgaataatgctgctatgaacatttgtgtgcaggtttttttttggacatatttctccatttctcttgggtatgtacataggaatgaaattgctgggtcatgtggtaacactatatttagca-ttttgaggacctgccaaactactccacagtggctatccctttctac---tttttttttttttt----------tttttttttgagacagcgtcttgctctgttacccaggctggagcacagtggcatgatttcgacttattgcaacctctacctcctgggttcaagcagttctcttgcctcagcctcctgaatagttgggattacaggcatgtgccgcca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29337969 465 + 50890351 aaagttcatccatattgtagcatttatcagaacctcattcctttttatagttg----aatactccattgtatgtc--tactacatttgtttattcatttgtcagttgataaagagttgggtcgttagctacttttgactgttatgaataatgcttctatgaacatttgtgtgcaggtttttgtttggacatatttcgccatttctcttgggtatatacataggaatgaaattgctgggtcatgtggtaacaccatatttagca-ttttgaggacctgccaaactactccacagtggctatcccattctac--ttttttttttttttt----------tttttttttgagacagcatcttgctctgttacccaggctggagcacagtggcatgatttcgacttattgcaacctctgcctcctgggttcaagcagttctcttgcctcagcctcctgaatagttgggattacaggcatgtgccacca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 970651 457 - 2385121 aaggttcatccatattgtagcatttatcagaacctcattcctttttatagttg----aataatccattgtatgtc--tactacatttgtttattcatttgtcagttgataaagagttgggtcgttagctccttttgactgttatgaataatgctgctatgaacatttgtgtgcaggttttt-tttggacatatttctccatttctcttgggtatgtacataggaatgaaattgctgggtcatgtggtaacactatatttagca-ttttgaggacctgccaaactactccacagtggctatcccattctac---------tttttttt----------tttttttttgagacagcgtcttgctctgttacccaggctggagcacagtggcatgatttcgacttattgcaacctctacctcctgggttcaagcagttctcttgcctcagcctcctgaatagttgggattacaggcatgtgccgcca i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665668 501 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e colAng1.NW_012111697v1 2412240 773 + 4274983 I a score=114452.000000 s hg38.chr19_GL383574v1_alt 147644 134 + 155864 cacccagctaa-------Atttttttttttttttt---------gagtctcgctccatcacccagggtggaatgcagtggcgtgatctcggctcactgcaaggctccgccttccgggttcatgccattctcctgcctcagcctcccaagt s panTro5.chr19 36215111 132 + 61309027 cacccagctaa---------ttttttttttttttt---------gagtctcgttccatcacccagggtggaatgcagtggcgtgatctcggctcactgcaaggctccgcctcccgggttcatgccattctcctgcctcagcctcccaagt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39958797 132 + 64411610 cacccagctaa---------ttttttttttttttt---------gagtctcgctccatcacccagggtggaatgcagtggcgtgatctcggctcactgcaaggctccgcctcccgggttcatgccattctcctgcctcagcctcccaagt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6370561 141 - 8369475 cacccagctaatttttttttttttttttttttttt---------gagtctcgctccatcacccagggtggaatgcagtggcgtgatctcggctcactgcaaggctctgcctcccgggttcatgccattctcctgcctcagcctcccaagt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63969185 150 - 106955855 cacccagctaatttttttttttttttttttttttttttgagacggagtcttgttccatcgcccagggtggaatgcagtggcgtgatctcggctcactgcaaagctccgtctcccgagttcacgccattctcctgcctcagcctcccaagc i nomLeu3.chr10 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e chlSab2.chr6 29338434 0 + 50890351 C e canFam3.chr1 4665668 501 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e colAng1.NW_012111697v1 2412240 773 + 4274983 I e manLeu1.NW_012102454v1 971108 0 - 2385121 C e cerAty1.NW_012005268v1 5535686 0 + 7714307 C e macNem1.NW_012011689v1 4612395 0 - 13342542 C e macFas5.chr19 34738444 0 + 59248254 C e rheMac8.chr19 30284270 0 + 53671032 C a score=21505.000000 s hg38.chr19_GL383574v1_alt 147778 4 + 155864 cacc s panTro5.chr19 36215243 4 + 61309027 cacc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39958929 4 + 64411610 cacc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6370702 4 - 8369475 cacc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63969335 4 - 106955855 cacc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30284270 4 + 53671032 cacc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34738444 4 + 59248254 cacc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4612395 4 - 13342542 cacc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5535686 4 + 7714307 cacc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29338434 4 + 50890351 cacc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 971108 4 - 2385121 cacc i manLeu1.NW_012102454v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665668 501 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e colAng1.NW_012111697v1 2412240 773 + 4274983 I a score=790650.000000 s hg38.chr19_GL383574v1_alt 147782 138 + 155864 cagctaatttttgtattttttagtagaaacagggttttgccatgttg-ccaggctggtttctgacccctgacctcaaatgatcctcccgcctctgcctcccaaagtgctgggattacagtcatgagctactgaattcgg s panTro5.chr19 36215247 138 + 61309027 cagctaatttttgtattttttagtagaaacagggttttgccatgttg-tcaggctggtttctgacccctgacctcaaatgatcctcccgcctctgcctcccaaagtgctgggattacagtcatgagctactgaattcgg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39958933 138 + 64411610 cagctaatttttgtattttttagtagaaacagggttttgccatgttg-tcaggctggtttctgacccctgacctcaaatgatcctcccgcctctgcctcccaaagtgctgggattacagtcatgagctactgaattcgg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6370706 138 - 8369475 cagctaatttttgtattttttagtagaaacagggttttgccatgttg-ccaggctggtttctgacccctgacctcaaatgatcctcccgcctctgcctcccaaagtgctgggattacagtcatgagctactgaattcgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63969339 138 - 106955855 cagctaatttttgtattttttagtagaaacagggttttgccatgttg-ccaggctgacctctgacccctaacctcaaatgatcctcccgcctctgcctcccaaagtgctgggattacagtcatgagctactgaattcgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30284274 139 + 53671032 cagctaatttttgtattttttagtagaaacagtgttttgccatgttgaccaggctggtctctgactcctgacctcaaatgatcctcccgcctctgcctcccaaagtgctgggattacagtgatgagctactgcatttgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34738448 139 + 59248254 cagctaatttttgtattttttagtagaaacagtgttttgccatgttgaccaggctggtctccgactcctgacctcaaatcatcctcccgcctctgcctcccaaagtgctgggattacagtgatgagctactgcatttgg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4612399 139 - 13342542 cagctaatttttgtattttttagtagaaacagtgttttgccatgttgaccaggctggtctctgactcctgacctcaaatgatcctcccgcctctgcctcccaaagtgctgggattacagtgatgagctactgcatttgg i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5535690 139 + 7714307 cagctaatttttgtattttttagtagaaacagtgttttgccatgttgagcaggctggtctctgactcctgacctcaaatgatcctcccacctctgcctcccaaagtgctgggattacagtgatgagctactgcatttgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29338438 139 + 50890351 cagctaatttttgtattttttagtagaaacactgttttgctgtgttgaccaggctggtctctgactcctgacctcaaatgatcctcccacctctgcctcccaaagtgctggaattacagtgatgagctactgcatttgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 971112 139 - 2385121 cagctaatttttgtattttttagtagaaatagtgttttgccatgttgaccaggctggtctccgactcctgacctcaaatgatcctcccacctctgcctcccaaagtgctgggattacagtgatgagctactgcatttgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2413013 139 + 4274983 cagctaatttttgtattttttagtagaaacagtgttttgccacgttgaccaggctggtctccgactcctgacctcaaatgatcctcccgcctctgcctcccaaagtgctgggattacagtgatgagctactgcattcgg i colAng1.NW_012111697v1 I 773 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4665668 501 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=2372286.000000 s hg38.chr19_GL383574v1_alt 147920 410 + 155864 cccattttacaatcctatatgcaatgtatgagtgttttgatgtttccacatcttcatcaatacttgtta----ctgtctttcttactgaagtaatcaGTTTTGATAAAGCAGCCATATGGCAAACTAAA----CAGTGAAGAGATTTTTACATGCATATTAGC---TTAAGTTGCTCTCTAAACAGTTGTAGTGTGTATTGGCG-TATTTATAAAAATTTGCACTGTGAGCTTAGCACTAAAGTAAAT-G-TTAATGACTAATAACATAATTCTTCAACTTGTTTAGCTTTTGGAAAATTT----------------------------------------------------------------TTCATTTCAAAAATGAA----------GCACTCTTGAAGGGAA-AAAAAGGAGTAAATAAAAAATGAGTTGTTTGATCCTCTCTCTCTTGATTCACCAGATGTAATTGTTCTCTTGGAGCAt---------tttttttttttt- s panTro5.chr19 36215385 411 + 61309027 cccattttacaatcctatatgcaatgtatgagtgttttgatgtttccacatcttcatcaatacttgtta----ctgtcttttttactgaagtaatcAGTTTTAATAAAGCAGCCATATGGCAAACTAAA----CACTGAAGAGATTTTTACATGCATATTAGC---GTAAGTTGCTCTCTAAACAGTTGTAGTGTGTATTGGCA-TATTTATAAAAATTTGCACTGTGAGCTTAGCACTAAAATAAAAAG-TTAATGACTAATAACATAATTCTTCAACTTGTTTAGCTTTTGGAAAATTT----------------------------------------------------------------TTCATTTCAAAAATGAA----------GCACTCTTGAAGGGAA-AAAAAGGAGTAAATAAAAAATGAGTTGTTTGATCCTCTCTCTCTCGATTCACCAGATGTAATTGTTCTCTTGGAGCAt---------tttttttttttt- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39959071 408 + 64411610 cccattttacaatcctatatgcaatgtatgagtgttttgatgtttccacatcttcatcaatacttgtta----ctgtcttttttactgaagtaatcAGTTTTAATAAAGCAGCCATATGGCAAACTAAA----CACTGAAGAGATTTTTACATGCATATTAGC---TTAAGTTGCTCTCTAAACAGTTGTAGTGTGTATTGGCA-TATTTATAAAAATTTGCACTGTGAGCTTAGCACTAAAATAAAAAG-TTAATGACTAATAACATAATTATTCAACTTGTTTAGCTTTTGGAAAATTT----------------------------------------------------------------TTCATTTCAAAAATGAA----------GCACTCTTGAAGGG-A-AAAAAGGAGTAAATAAAAAATGAGTTGTTTGATCCTCTCTCTCTCGATTCACCAGATGTAATTGTTCTCTTGGAGCA-----------ttttttttttt- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6370844 409 - 8369475 cccattttacaatcctatatgcaatgtatgagtgttttgatgtttccacatcttcatcaatacttgtta----ctgtcttttttactgaagtaatcAGTTTTGATAAAGCAGCCATATGGCAAACTAAA----CAGTGAAGAGATTTTTACATGCATATTAGC---TTAAGTTGCTCTCTAAACAGTTGTAGTGTGTATTGGCA-TATTTATAAAAATTTGCACTGTGAGCTTAGCACTAAAATAAAAAG-TTAATGACTAATAACGTAATTCTTCAACTTGTTTAGCTTTTGGAAAATTT----------------------------------------------------------------TTCATTTCAAAAATGAA----------GCACTCTTGAAGGGAA-AAAAAGGAGTAAATAAAAAATGAGTTGTTTGATCCTCTCTCTCTTGATTCACCAGATGTAATTGTTCTCTTGGAGCA-----------ttttttttttt- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63969477 413 - 106955855 cccattttacaatcctatatgcaatgtatgagtgttttgatgtttccacatcttcatcaatacttattactgtctgtcttttttactgaagtaatcAGTTTTGATAAAGCAGCCTTATGGCAAACTAAA----CAGTGAAGAGATTTTTACATGCATATTAGC---TTAAGTTGCTCTCTAAACAGTTGTAGTGTGTATTGGCA-TATTTATAAAAATTTGCACTGTGAGCTTAGCACTAAAATAAAAAG-TTAACGACTAATAACATAATTCTTCAACTTGTTTAGCTTTCAGAAAATTT----------------------------------------------------------------TTCATTTTAAAAATGAA----------GCACTCTTGAAGAGAA-AAAAAGGAGTAAATAAAAAATGAGTTGTTTGATC--CTCTCTCTTGATTCACCAGATGTAACTGTTCTCTTGGAGCAt---------tttttttttttt- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30284413 410 + 53671032 cccattatatgag-ctacatgcaatgtatgagtgttttgatgtttccacatcttcatcaatacttgtta----ctgtcttttttactgaagtaatcAGTTTTGATAAAGCAGACATATGGCAAACTAAATAGTCAGTGAAGATATTTTTACATGCGTATTAGC---TTAAGTTGCTCTCTAAACAGTTGTAATGTGTATTGGCA-TATTTATAAAAATTTGCACTGTGAATTTAGCACTA----AAAAAG-TTAATGACTAATAACATAATTCTTCAACTTGTTTAGCTTTTAGAAAATTT----------------------------------------------------------------TTCATTTCAAGAATGAA----------GCACTCTTGAAGGGAA-AAAAAGGAGTAAATAAAAAATGAGTTGTTTCATCCTCTCCCTCTTGATTCACCAGATGTAATTGTTCTCTTGGAGCAA---------tttttttttttt- i rheMac8.chr19 C 0 I 6 s macFas5.chr19 34738587 410 + 59248254 cccattatatgag-ctacatgcaatgtatgagtgttttgatgtttccacatcttcatcaatacttgtta----ctgtcttttttactgaagtaatcAGTTTTGATAAAGCAGACATATGGCAAACTAAATAGTCAGTGAAGATATTTTTACATGCGTATTAGC---TTAAGTTGCTCTCTAAACAGTTGTAATGTGTATTGGCA-TATTTATAAAAATTTGCACTGTGAATTTAGCACTA----AAAAAG-TTAATGACTAATAACATAATTCTTCAACTTGTTTAGCTTTTAGAAAATTT----------------------------------------------------------------TTCATTTCAAGAATGAA----------GCACTCTTGAAGGGAA-AAAAAGGAGTAAATAAAAAATGAGTTGTTTCATCCTCTCCCTCTTGATTCACCAGATGTAATTGTTCTCTTGGAGCAA---------tttttttttttt- i macFas5.chr19 C 0 I 6 s macNem1.NW_012011689v1 4612538 414 - 13342542 cccattatatgag-ctacatgcaatgtatgagtgttttgatgtttccacatcttcatcaatacttgtta----ctgtcttttttactgaagtaatcAGTTTTGATAAAGCAGACATATGGCAAACTAAATAGTCAGTGAAGATATTTTTACATGCGTATTAGC---TTAAGTTGCTCTCTAAACAGTTGTAATGTGTATTGGCA-TATTTATAAAAATTTGCACTGTGAATTTAGCACTAAAATAAAAAG-TTAATGACTAATAACATAATTCTTCAACTTGTTTAGCTTTTAGAAAATTT----------------------------------------------------------------TTCATTTCAAGAATGAA----------GCACTCTTGAAGGGAA-AAAAAGGAGTAAATAAAAAATGAGTTGTTTCATCCTCTCCCTCTTGATTCACCAGATGTAATTGTTCTCTTGGAGCAA---------tttttttttttt- i macNem1.NW_012011689v1 C 0 M 761 s cerAty1.NW_012005268v1 5535829 405 + 7714307 cccattatatgag-ctacatgcaatgtatgagtgttttgatgtttccacatcttcatcaatacttgtta----ctgccttttttactgaagtaatcAGTTTTGATAAAGCAGACATTTGGCAAAC----TAGTCAGTGAAGATATTTTTACATGCGTATTAGC---TTAAGTTGCTCTCTAAACAGTTGTAATGTGTATTGGCA-TATTTATAAAAATTTGCACTGTGAATTTAGCACTAAAATAAAAAG-TTAATGACTAATAACATAATTCTTCAACTTGTTTAGCTTTTAGAAAATTT----------------------------------------------------------------TTCATTTCAAGAATGAA----------GCACTCTT-----GAA-AAAAAGGAGTAAATAAAAAATGAGTTATTTCATCCTCTCCCTCTTGATTCACCAGATGTAATTGTTCTCTTGGAGCAA---------tttttttttttt- i cerAty1.NW_012005268v1 C 0 I 5 s chlSab2.chr6 29338577 416 + 50890351 cccattatatgag-ctacatgcaatgtatgagtgttttgatgtttccacatcttcatcaatacttgtta----ctgtcttttttactgaagtaatcAGTTTTGATAAAGCAGACATATGGCAAACTAAATAGCCAGTGAAGATATTTTTACATGCCTATTAGC---TTAAGTTGCTCTCTAAACAGTTGTAATGTGTATTGGCA-TATTTATAAAAATTTGCACTGTGAATTTAGCACTAAAATAAAAAG-TTAATGAC----AACATAATTCTCCAACTTGGTTAGCTTTTAGAAAATTT----------------------------------------------------------------TTCATTTCAAGAATGAA----------GCACTCTTGAAGGGAA-AAAAAGGAGTAAATAAAAAATGAG---TTGTTTCATCCTCTCCTTGATTCACCAGATGTAATTGTTCTCTTGGAGCAAttttttttttttttttttttt- i chlSab2.chr6 C 0 I 3 s manLeu1.NW_012102454v1 971251 411 - 2385121 cccattatatgag-ctacatgcaatgtatgagtgttttgatgtttccacatcttcatcaatacttgtta----ctgtcttttttactgaagtaatcAGTTTTGATAAAGCAGACATATGGCAAACTAAATAGTCAGTGAAGATATTTTTACATGCGTATTAGC---TTAAGTTGCTCTCTAAACAGTTGTAATGTGTATTGGCA-CATTTATAAAAATTTGCACTGTGAATTTAGCACTAAAATAAAAAG-TTAATGACTAATAACATAATTCTTCAACTTGTTTAGCTTTTAGAAAATTT----------------------------------------------------------------TTCATTTCAAGAATGAA----------GCACTCTTGAAGGGAA-AAAAAGGAGTAAATAAAAAATGAG---TTTCATCCTCTCCCTCTTGATTCACCAGATGTAATTGTTCTCTTGGAGCAA---------tttttttttttt- i manLeu1.NW_012102454v1 C 0 I 3 s colAng1.NW_012111697v1 2413152 404 + 4274983 cccattacatgag-ctacatgcaatgtatgagtgttttgatgtttccacatcttcatcaatacttgtta----ctgtcttttttactgaagtaatcAGTTTTGATAAAGCAGACATATGGCAAACTAAATAGTCAGTGAAGATATTTTCACATGCGTATTAGC---TTAAGTTGCTCTCTAAACAGTTGTAATGTGTATTGGCATTATTTATAAAAATTTGCACTGTGAATTTAGCACTAAAATAAAAAG-TTAATGACTAATAACATAATTCTTCAACTTGTTTAGCTTTTAGAAAATTT----------------------------------------------------------------TTCATTTCAAAAATGAA----------GCACTCTTGAAGGGAA-AAAAAGGAGTAAATAAAAAATGAGTTGTTTCA-CCTCTCCCTCTTGATTCACCAGATATAAttgtttt-------------------tttttttttttt- i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4666169 455 - 122678785 cccattttacagtcctttgagcagtgtatgagggtcccagtttctccacatccttaccaacccttgttc----ttatctttttgtttgaAGTGATTATTTTTGATGAAGCAGCTATAT-GCAAACCAAA----CAGTGAAGAGATTTGAATATATATTTTAGCTTGTTAAGTGATTCCTTAAGCAGTTATAATATCCGTTGGCG-TGTGTATAAAAATTT-CACTGTGACCATAGCACTAAAATAAAAAGTTTAATGAC---CAACATAATCCCCCAACTTGTTTACCTTTTAGaaaaattatttttattaaaaaaaatatGGTCCTTAatctgaaactactataacactgtatgttaattatacttgaattaaaaaataaattaaaataaTACATTCCTAAAGGGAAGAAAAAGGAGCAAAT-------------------------------GATTCACCAGTTGTAATTATTCTCCTAAAGCAT---------CAATTTGTCTTTT i canFam3.chr1 I 501 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=215986.000000 s hg38.chr19_GL383574v1_alt 148330 44 + 155864 aaagacagattctctgttttccaggctggagtgcagtggtgtga s panTro5.chr19 36215796 44 + 61309027 aaagacagattctctgttttccaggctggagtgcagtggtgtga i panTro5.chr19 C 0 C 0 s panPan2.chr19 39959479 44 + 64411610 aaagacagattctctgttttccaggctggagtgcagtggtgtga i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6371253 44 - 8369475 aaagacagattctctgttttccaggctggagtgcagtggtgtga i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63969890 44 - 106955855 aaagacagattctctgttgcccaggctggagtgcagtggtgtga i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30284829 44 + 53671032 aaagacagattctgtgttgcccaggctggagtgcagtggtgtga i rheMac8.chr19 I 6 C 0 s macFas5.chr19 34739003 44 + 59248254 aaagacagattctgtgttgcccaggctggagtgcagtggtgtga i macFas5.chr19 I 6 C 0 s cerAty1.NW_012005268v1 5536239 44 + 7714307 aaagacatattctgtgttgcccaggctggagtgcagtggtgtga i cerAty1.NW_012005268v1 I 5 C 0 s chlSab2.chr6 29338996 44 + 50890351 aaagacagattctgtgttgcccaggctggagtgcagtggtgtga i chlSab2.chr6 I 3 C 0 s manLeu1.NW_012102454v1 971665 44 - 2385121 aaagacagattctgtgttgcccaggctggtgtgcagtggtgtga i manLeu1.NW_012102454v1 I 3 C 0 s colAng1.NW_012111697v1 2413556 44 + 4274983 aaagacagattctctgttgcccaggctggagtgcagtggtgtga i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4666624 42 - 122678785 TAAACTATACACTTGGGATCCCTGGGTG--GCGCAGCGgtttga i canFam3.chr1 C 0 I 4670 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e macNem1.NW_012011689v1 4612952 761 - 13342542 M a score=1138511.000000 s hg38.chr19_GL383574v1_alt 148374 238 + 155864 tcatggttcactgcagcctcaacttttcaggctcaagtgatcctcccaccttagcctcccgagtagctgggaccacaggtgcacaccatcatgcccggttaatttttgtatgtttttgtagagacagggtttcgccatgttgcccaggctggttgaacttctgggctcaagtgatctgcctgctttggcctcccaaagtgctaggattacaggtatgagccactttgcccaaccTCTT s panTro5.chr19 36215840 238 + 61309027 tcatggttcactgcagcctcaacttttcaggctcaagtgatcctcccaccttagcctcccgagtagctgggaccacaggtgcacaccatcatgcccggttaatttttgtatgtttttgtagagacagggtttcaccatgttgcccaggccggttgaacttctgggctcaagtgatctgcctgctttggcctcccaaagtgctaggattacaggtatgagccactttgcccaaccTCTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39959523 238 + 64411610 tcatggttcactgcagcctcaacttttcaggctcaagtgatcctcccaccttagcctcccgagtagctgggaccacaggtgcacaccatcatgcccggttaatttttgtatgtttttgtagagacagggtttcgccatgttgcccaggccggttgaacttctgggctcaagtgatctgcctgctttggcctcccaaagtgctaggattacaggtatgagccactttgcccaaccTCTT i panPan2.chr19 C 0 M 773 s gorGor5.CYUI01015150v1 6371297 238 - 8369475 tcatggttcactgcagcctcaacttttgaggctcaagtgatcctcccaccttagcctcccgagtagctgggaccacaggtgcacaccatcatgcccgcttaatttttgtatgtttttgtagagacagggtttcgccatgttgcccaggctggttgaacttctgggctcaagtgatctgcctgctttggcctcccaaagtgctaggattgcaggtatgagccactttgcccaaccTCTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63969934 236 - 106955855 tcatggttcactgcagcctcaacttttcgggctcaagtgatcctcccaccttagcctcccaagtagctgagaccaca-gtgcacaccatcatgcccggttaatttttgtatgtttttgtagagaca-ggtttcgccatgttgcccaggctggttgaacttttgggctcaagcgatctgcctgctttggcctcccaaagtgctaggattacaggtatgaaccactttgcccgATCTCTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30284873 238 + 53671032 tcatggttcactgtagcctcaactttttgggctcaagtgatcctcccaccttagcctcccgagtagctgggaccacgggtgcgcaccatcatgcccggttaatttttgtatgtttttgtagagacagagtttcaccatgttgcccaggctggttgaacttctaggctcaagcgatctgcccgccttggcttcccaaagtgctaagattacaggtgtgagccactttgcccaaccTCTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34739047 238 + 59248254 tcatggttcactgtagcctcaactttttgggctcaagtgatcctcccaccttagcctcccgagtagctgggaccacgggtgcgcaccatcatgcccggttaatttttgtatgtttttgtagagacagagtttcaccatgttgcccaggctggttgaacttctgggctcaagcgatctgcctgccttggcttcccaaagtgctaagattacaggtgtgagccactttgcccaaccTCTT i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5536283 236 + 7714307 t--tggttcactgtagcctcaactttttgggctcaagtgatcctcccaccttagcctcccgagtagctgggaccacgggtgcgcaccatcatgcccggttaatttttgtatgtttttgtagagacagagtttcaccatgttgcccaggctggttgaacttctgggctcaagcgatctgcccgccttggcttcccaaagtgctaagattacaggtgtgagccaccttgcccaaccTCTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29339040 238 + 50890351 tcatggttcactgtagccttaactttttgggctcaagtgatcctcccaccttagcctcccgagtagctgggaccacgggtgtgcaccatcatgcccggttaatttttatatgtttttgtagagacaaagtttcaccatgttgcccaggctggttgaacttctgggctcaagcgatctgcccgccttggcttcccaaagtgctaagattacaggtgtgagccactttgcccaaccTCTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 971709 236 - 2385121 t--tggttcactgtagcctcaactttttgggctcaagtgatcctcccaccttagcctcccgagtagctgggaccatgggtgcgcaccatcatgcccggttaatttttgtatgtttttgtagagacagagtttcaccatgttgcccaggctggttgaacttctgggctcaagcgatctgcccgccttggcttcccaaagtgctaagattacaggtgtgagccactttgcccaaccTCTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2413600 238 + 4274983 tcatggttccctgtagcctcaactttttgtgctcaagtggtactcccaccttagcctcccgagtagctgggaccacaggtgcgcaccatcatgcccggttaatttttggatgtttttgtagagacagggtttcaccatgttgcccaggctggttgaacttctggggtcaagtgatctgcccgccttggcctcccaaagtgcgaagatgacaagtgtgagccactttgcccgaccTCTT i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e macNem1.NW_012011689v1 4612952 761 - 13342542 M a score=112016.000000 s hg38.chr19_GL383574v1_alt 148612 84 + 155864 GAAGCATAAACATATA---------------------------------------A-----------------acacacacacacacacacacacaca---------------------------cacaTATTTCttttttttttt-tttttttttttttttgagacg s panTro5.chr19 36216078 120 + 61309027 GAAGCataaacatatatatatacacacacacacaaacacacacacacatatataca-----------------acacacacacacatacacacacaca---------------------------cacaTATATAtttcttttttt-tttttttttttt---gagacg i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6371535 127 - 8369475 GAAGCATAAACATGTATacacacacacacacacacacacacacaca---------aacacacacacacatacaacacacacacacacacacacacaca---------------------------cacaTATATATAtttcttttt-ttttttttttt----gagtcg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63970170 89 - 106955855 GAAGcataaacatatatatatatacacacac------------------------------------------acacacgcacatatacatacacaca---------------------------tacatatatacatatatttct-tttttt---------gagacg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30285111 82 + 53671032 GAAGCACAAAAatgtg------------tgt------------------------------------------gtatatgtgtgtgtatatatatata---------------------------tatatatatatagttttttgg-ttttctttttt----gagaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34739285 74 + 59248254 GAAGCACAAAAATGTG--------------------------------------------------------------TGTGTGTGtatatatatata---------------------------tatatatatatagttttttgg-ttttctttttt----gagaaa i macFas5.chr19 C 0 C 0 s cerAty1.NW_012005268v1 5536519 86 + 7714307 GAAGCACAAAAAtgtgtg--------tgtgt------------------------------------------gtgtgtgtgtgtgtatatatatata---------------------------tatatatatatagttttttgg-ttttctttttt----gagaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29339278 59 + 50890351 GAAGCACAAAAATGTGTG------------------------------------------------------------------------------ta---------------------------tatatatatatagttttttggtttttttttttt----gagaca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 971945 94 - 2385121 GAAGCACAAAAAtgtgtgtgtgtgtgtgtgt------------------------------------------gtgtgtgtgtatatatatatatata---------------------------tatatatatatagttttttgg-ttttctttttt----gagaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2413838 121 + 4274983 GAAGCATAAATGTGTATATATatacacacac------------------------------------------atacacacacatatacacacacatacacacacacacacacCCCGTGTGTGTGTGTATATATGTAGttttttgt-ttttttttttt----gagaca i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e macNem1.NW_012011689v1 4612952 761 - 13342542 M e panPan2.chr19 39959761 773 + 64411610 M a score=531251.000000 s hg38.chr19_GL383574v1_alt 148696 111 + 155864 gagccttactctgtcacccaggct-ggagtgcagtggtgcgatctcagctcactgcaacctccgcctctcaggttggagtgattctcctgcctcagcctcccgagtagctgg s panTro5.chr19 36216198 111 + 61309027 gagccttactctgtcacccaggct-ggagtgcagtggtgtgatctcagctcactgcaacctccgcctctcaggttggagtgattctcctgcctcagcctcccgagtagctgg i panTro5.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6371662 109 - 8369475 gagccttactctgtcacccaggct-gga--gcagtggtgcgatctcagctcactgcaacctccgcctctcaggttggagtgattctcctgcctcagcctcccgagtagctgg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63970259 108 - 106955855 gagtcttactctgccacccagact-ggagtgcagtggtgcaatctcagctcactgcaacctccgcctcccaggttggagtgatt---ctgcctcagcctcccgagtagctgg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30285193 112 + 53671032 gagtcttactctgtcacccaggctgggagtgcagtggtgtgatctcaactcactgcaacctctgcctcccaggttggagtgattctcctgcctcagcctcccgagtagctgg i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34739359 112 + 59248254 gagtcttactctgtcacccaggctgggagtgcagtggtgtgatctcaattcactgcaacctctgcctcccaggttggagtgattctcctgcctcagcctcccgagtagctgg i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4613728 112 - 13342542 gagtcttactctgtcacccaggctgggagtgcagtggtgtgatctcaactcactgcaacctctgcctcccaggttggagtgattctcctgcctcagcctcccgagtagctgg i macNem1.NW_012011689v1 M 761 C 0 s cerAty1.NW_012005268v1 5536605 112 + 7714307 gagtcttactctgtcacctaggctgggagtgcagtggtgcaatctcaactcactgcaacctctgcctcccaggttggagtgattctcctgcctcagcctcccaagtagctgg i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29339337 112 + 50890351 gtgtcttactctgttacccaggctgggagtgcagtggtgcgatctcaactcactgcaacctctgcctcccaggttggagtgattctcctgcctcagcctcccgagtagctgg i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 972039 112 - 2385121 gagtcttactctgtcacctaggctgggagtgcagtggtgcgatctcaactcactgcaacctctgcctcccaggttggagtgattctcctgcctcagcctcccaagtagctgg i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2413959 112 + 4274983 gagtcttactctgtcacccaggctgggagtgcagtggtgcgatctcaactcactgcaacctctgcctcccaggttggagtgattctcctgcctcagcctctcgagtagctgg i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e panPan2.chr19 39959761 773 + 64411610 M a score=9463270.000000 s hg38.chr19_GL383574v1_alt 148807 1719 + 155864 gattataggcacgcgtcactacacctggcttattttt-gtattttttagtagaaatggggtttccttctgttggccaggctggtctctaactcctgacctctcaggtgatccatctgcctcagcctcccaaagtgctgggattacaggtgtcagccactgtgcccggTTGCATAAACTTATTTTTATAAATTATGTGCTTCTAAATTATCAGGTGGACTGTGCCTTACATGTATAGGCTTGAGTAggctgagcatggtggctcacacctataatcccaacacttttagaggccaaggtaggaagatggcttggggtcacgagttcaaggccagcgtggacaacatagtgag-accctgtctctacaaaaaaaaaaaaa----gaaaattaggtgggcatggtggtgcatgcctgaggtcctggcccctgaggaggctg-aggtggaggattgcttgagcccagaaggtcaaggctgcaatgagccatgattgtatgactatactccagtttgggtgacagagagagaccccatctctaaaagc-aaaaaaaaaaa----gtgaaataaaataaaaaATCGttgctatcttttattaatattc--tgttttgggagacattattcttatattttcctcacactttttaaatgtggtttcttttagttctttgaacatacttaaatt----gacttaaactcttgtctgttaagtccaatatctgggcttcccttgggaagagttttctattgttgttttttccctttatatgggctatattcttttgtttctttgcatatcttccaattttttgttgaaaactggacattttattttattattattttcagacagagtctctctctgtcgcccaggctggagtacagtggtgtgatccaagcaattctcatgcctcaactgcctgagtagctgggactatgggtgggcagcaacacacctggctaa-ttttttttgtattcttagtagagacagggtttcaccatgttggccaagctggccttgaacccctgacctcaggtgatttgcccacctcggcctcccaaagcactgggattacaggcttgagccactgtggccagccaactggacatttttaatgacataatgtggcaactctgaaaatcagattctcctccctctccagatgagctctaagtcaggtaaaatacagagatatttgcaaatggggtattttggggaaccaccagacaggttaaataatgccaatttcctgggaatggtactttgaaggagctgtagcccagttctgcttcctctggtaactgccagtcttctggtcttcaatgtggatgcagctggtagttttcaaggctattatggagctggagagctaggaatgggactcagtcaagttaaaatgctacaaaactcactgttcttaccaggattcagctatttatctttgataaattatccccagtttg----ctaaaagcctatttccagagttctgaaaaaggtgattct-attattttgccaatttttcattgtttttatgtagtagagaattttggtcagggaaagtccttattctgccatttttgatgaTACTCTTTCCCTCCC----CTttttaggcttttattttcatgaatcttgtatctcttggtgttttgttttgttttgttttgttttgtttt------------------------Cgagacagggtcttgttttgtcacccaggctagagtgcagtggtgtaatcatggcccactgcagct s panTro5.chr19 36216309 1732 + 61309027 gattataggcacgcgtcaccacacctggcttgttttttgtattttttagtagaaatggggtttccttctgttggccaggctggtctctaactcctgacctctcaggtgatccatctgcctcagcctcccaaagtgctgggattacaggtgtcagccactgtgcctggttgcataaacttatttttataaattatatGCTTCTAAATTATCAGGTGGACTGTGCCTTACATGTATAGGCTTGAGTAggctgagcatggtggctcacacctataatcccaacacttttagaggccaaggtaggaagatggcttggggtcatgagttcaaggccagcgtggacaacatagtgag-accctgtctctacaaaaaaaaaaaaa---agaaaattaggtgggcatggtggtgcacgcctgaggtcctggcccctgaggaggctg-aggtggaggattgcttgagcccagaagatcaaggctgcaatgagccatgattgtatgactatactccagtttgggtgacagagagagaccccatctctaaaagc-aaaaaaaaaaaaaaaGTGAAATAAAATAAAAAATCGttgctatcttttattaatattc--tgttttgggagacattattcttatattttcctcacactttttaaatgtggtttcttttagttctttgaacatacttaaattagctgacttaaactct-gtctgttaagtccaatatctgggcttccgttgggaaaagttttctattgttgttttttccctttatatgggctgtattcttttgtttctttgcatatcttccaattctttgttgaaaactggacattttattttattattattttcagacagagtctcgctctgttgcccaggctggagtacagtggtgtgatccaagcaattctcatgcctcaactgcctgagtagctgggactatgggtgggcaacaacacacctggctaa-ttttttttgtattcttagtagagacagggtttcaccatattggccaagctggtcttgaacccctgacctcaggtgatttgcccacctcggcctcccaaagcactgggattacaggcttgagccactgtggccagccaactggacatttttaatgacataatgtggcaactctgaaaatcagattctcctccctctccagatgagctctaagtcaggtaaaatacagagatatttgcaaatggggtattttggggaaccaccagacaggttaaataatgccaatttcctgggaatggtactttgaaggagctgtagcccagttctgcttcctctggtaactgccagtcttctggtcttcaatgtggatgcagctggtagttttcaaggctattatggagctggagagctaggaatgggactcagtcaagttaaaatgctacaaaactcactgttcttaccaggattcagctatttatctttgataaattatccc--atttg----ctaaaagcctatttccagagttctgaaaaaggtgattctgattattttgccaatttttcattgtttttatgtagtagagaattttggtcagggaaagtccttattctgccatttttgatgaTACTCTTTCCCTCCC----CTttttaggcttttattttcatgaatcttgtatctcttggtgttttgttttgttttcttttcttttctttt-------------------tttttcgagacagggtcttgttttgtcacccaggctagtgtgcagtggtgtaatcatggcccactgcagct i panTro5.chr19 C 0 C 0 s panPan2.chr19 39960534 1727 + 64411610 gattataggcacgcgtcaccacacctggcttgttttttgtattttttagtagaaatggggtttccttctgttggccaggctggtctctaactcctgacctctcaggtgatccatctgcctcagcctcccaaagtgctgggattacaggtgtcagccactgtgcctggTTGCATAAACTTATTTTTATAAATTATATGCTTCTAAATTATCAGGTGGACTGTGCCTTACATGTATAGGCTTGAGTAggctgagcatggtggctcacacctataatcccaacacttttagaggccaaggtaggaagatggcttggggtcacgagttcaaggccagcgtggacaacatagtgag-accctgtctctacaaaaaaaaaa-------gaaaattaggtgggcatggtggtgcacgcctgaggtcctggcccctgaggaggctg-aggtggaggattgcttgagcccagaagatcaaggctgcaatgagccatgattgtatgactatactccagtttgggtgacagagagagaccccatctctaaaagc-aaaaaaataaa-aaGGTGAAATAAAATAAAAAATCGttgctatcttttattaatattc--tgttttgggagacattattcttatattttcctcacactttttaaatgtggtttcttttagttctttgaacatacttaaattagctgacttaaactct-gtctgttaagtccaatatctgggcttcccttgggaaaagttttctattgttgttttttccctttatatgggctgtattcttttgtttctttgcatatcttccaattctttgttgaaaactggacattttattttattattattttcagacagagtctcgctctgtcgcccaggctggagtacagtggtgtgatccaagcaattctcatgcctcaactgcctgagtagctgggactatgggtaggcaacaacacacctggctaa-ttttttttgtattcttagtagagacagggtttcaccatattggccaagctggtcttgaacccctgacctcaggtgatttgcccacctcggcctcccaaagcactgggattacaggcttgagccactgtggccagccaactggacatttttaatgacataatgtggcaactctgaaaatcagattctcctccctctccagatgagctctaagtcaggtaaaatacagagatatttgcaaatggggtattttggggaaccaccagacaggttaaataatgccaatttcctgggaatggtactttgaaggagctgtagcccagttctgcttcctctggtaactgccagtcttctggtcttcaatgtggatgcagctggtagttttcaaggctattatggagctggagagctaggaatgggactcagtcaagttaaaatgctacaaaactcactgtccttaccaggattcagctatttatctttgataaattatccc--atttg----ctaaaagcctatttccagagttctgaaaaaggtgattctgattattttgccaatttttcattgtttttatgtagtagagaattttggtcagggaaagtccttattctgccatttttgatgaTACTCTTTCCCTCCC----CTttttaggcttttattttcatgaatcttgtatctcttggtgttttgttttgttttcttttcttttctttt-------------------tttttcgagacagggtcttgttttgtcacccaggctagtgtgcagtggtgtaatcatggcccactgcagct i panPan2.chr19 M 773 C 0 s gorGor5.CYUI01015150v1 6371771 1729 - 8369475 gattataggcacgcgtcaccacacctggcttattttt-gtattttttagtagaaatggggtttccttctgttggccaggctggtctctaactcctgacctctcaggtgatccatctgcctcagcctcccaaagtgctgggattacaggtgtcagccactgtgcccggTTGCATAAACTTATTTTTATAAATTATATGCTTCTAAATTATCAGGTGGACTGTGCCTTACATGTATAGGCTTGAGTAggctgagcatggtggctcacacctataatcccaacacttttagaggccaaggtaggaagatggcttggggtcacgagttcaaggccagcgtggacaacatcgtgag-accccgtctctacaaaaaaaaaaaaaaaaagaaaattaggtgggcatggtggtgcacgcctgaggtcctggcccctgaggaggctg-aggtggaggattgcttgagcccagaaggtcaaggctgcaatgagccatgat----tgactatactccagtttgggtgacagagacagaccccatctct-aaagc-aaaaaaaaaaa--aagtgaaataaaaTAAAAAATCGttgctattttttattaatattc--tgttttgggagacattattcttatattttcctcacactttttaaatgtggtttcttttagttctttgaacatacttaaattagctgacttaaactct-gtctgttaagtccaatatctgggcttcccttgggaagagttttctgttgttgttttttccctttacatgggctgtattcttttgtttctttgcatatcttccaattttttgttgaaaactggacattttattttattattattttcagacagagtctcgctctgttgcccaggctggagtacagtggtgtgatccaagcaattctcatgcctcaactgcctgagtagctgggactatgggt-ggcaacaacacacctggctaatttttttttgtattcttagtagagacagggtttcaccatgttggccaagctggtcttgaacccctgacctcaggtgatttgcccacctcggcctcccaaagcactgggattacaggcttgagccactgtggccagccaactggacatttttaatgatataatgtgacaactctgaaaatcagattctcctccctctccagatgagctctaagtcaggtaaaatacagagatatttgcaaacggggtattttggggaaccaccagacaggttaaataatgccaatttcctgggaatggtactttgaaggagctgtagcccagttctgcttcctctggtaactgccagtcttctggtcttcaacgtggatgcagctggtagttttcaaggctattatggaactggagagctaggaatgggactcagtcaagttaaaatgctacaaaactcactgttcttaccaggattcagctatttatctttgataaattatccccagtttg----ctaaaagcctatttccagagttctgaaaaaggtaattctgattattttgccaatttttcattgtttttatgtagtagagaattttggtcagggaaagtccttattctgccatttttgatgaTACTCTTTCCCTCCC----CTttttaggcttttattttcatgaatcttgtatctcttggtgttttgttttgttttgttttcttttctttt-------------------tttttcgagacagggtcttgttttgtcacccaggctagagtgcagtggtgtaatcatggcccactgcagct i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63970367 1748 - 106955855 gattataggcacgcgtcaccacacctggcttattttt-gtattttttagtagagatggggtttccttctgttggccaggctggtcttgaactcctgac--ctcaggtgatccatctgcctcagcctcccaaagtgctgggattacaggtgtaagccactgtgcccggctgcataaacttatctttataaattatatGCTTCTAAATTACCAGGTGGACTGTGCCTTACATGTATAGGCTTGAGTAggctgagcatggtggctcacacctataatcccaacacttttagacgccaaggtaggaagatggcttggggtcaggagttcaaggccagcgtggacaacatagtgag-accctgtctctacaaaaaaaaaa-------gaaaattaggtgagcatggtggtgcacacctgaggtcctggcccctgaggaagctgaaggtggaggattgcttgagcccagaaggtcaaggctgcaatgagccatgattgtatgactatactccagtttgggtgacagagagagaccccatctctaaaaac-aaaaaaaGTAA----GTGAAATAAAATAAAAAataattgctatattttattaatattctgtgttttgggagacattattcttatattttccttacatttttaaaatgtggtttcttttagttctttgaacatacttaaattagctgacttaaactct-gtctgttaagtccaatatctgggcttcccttgggaagagttttctattgttgttttttccctttatatgggctgtatttttttgtttctttgcatatcttccaattttttgttgaaaactggacattttattttattattattttcagacagagtctcgctctgtcgcccaggctggagtacagtcgtgtgatccaagcaattcttgtgcctcaactgctggagtagctgggactatgggcggacaacaacacacctggctaa-ttttttttgtattcttagtagagacagggtttcactatgttggccaggctggtcttgaactcctgacctcaggtgatttgcccatcttagcctcccaaagcactgggattacaggcttgagccactgtggccagccaactggacatttttaatggtataatatgacagctctgaaaatcagattctcttccctctccagatgagctctaagtcaggtaaaatacagagatatttgcaaatggggtattttggggaaccaccagacaggttaaataatgcccatttcctgggaatggtactttgaaggagctgtagcccagttcttcttcctctggtaactgccagtcttctggtcttcaatgtggatgcagctggtagttttcaaagctgttatggagctggagagctaggaatgggactcagtcaagttaaaatgctacaaaactcactgttcttaccaggatccagc-atttatctttgataaattatccccagtttg----ctaaaagcctatttccagagttctgaaaaaggtgattctgattattttgccaatttttcattgtttttatgtagtagagaattttggtcaggggaaatccttattctgccatttttgatgaTACTCTTTCCCTCCCCTTTCTTTTTAGGCTTTTATTTTCATGAATCTTGTATCTCTTGGtgttttgttttgttttgttttgttttcttttTCtttttctttctttttttttttttgagacagggtcttgttttgtcacccaggctagagtgcagtggtgtaatcatggcccactgcagct i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30285305 1709 + 53671032 gattacaggcacgtgtcaccacacgtggcttattttt-gtattttttagtagaaatggggtttccttctgttggcgaggctggtcttgaactcctgac--ctcaggtgatccgtctgcctcagcctcccaaagtgccaggattacaggcatgagccactgcacctggctgcataaacttatctttataaattatatGCTTCTAAATTATCAGGTGGACTGTGCCTTAAATGTATAGGCTTGAGTAggcggggcatggtgtctcacacctatactcccaacacttttagaggccaaggtaggaagatagcttgggattaggagttcaaggccagcgtggacaacatagtgagtaccctgtctctacaaaaaaaagcaaa----gaaaattaggtgggcatggtggtgcatgcctgaggtcctggcccctgaggaggctg-aggtggaggattgcttgagcccagaaggtcaaggctgcagtgagccgtgattgcatgactatactccagtttgggtgacggagagagaccccatctctaaaaac-aaaaaaaGTAA----GTGAAATAAAATGAAAtatcattgctatcttttattaatattttgtgttttgggagccattattcctatattttccttacattttaaaaatgtggtttcttttagttttttgaacctacttaaattagctgacttaaactct---ttgttaagtcaaatatcttggcttcccttggggagagttttcta---ttgttttttccctttatatgggctgtatttttttgtttctttgcatatcttccaattttttgttgaaaactgaacattttatt---ttattatttttagacagagtctcactctgttacccatgctggagtgcagtggtgtgatccaagcaattctcgtgcttcaaccacctgagtag-tgggaccatgggtgggtgacatcacacctggctaa--ttattttggattattagtagagacagggtttcaccatgttggccaagctggtcttgaactcctaacctcaggtgatttgcccacatcagcctcccaaagccctgggattacaggcttgagcca-tgtggccaaccaactggacattttaaatgatgtaatgtggcagctctgaaaatcacattctcctccctctgcaggtgagctctcagtcaggtaaaatacagagatatttgcaaatggggtattttggggaaccaccagacaggtcaaataatgctaatttcttgggaatggtactttgaaggagctgtagcccagttctgcttcctctgctaactgccagtcttctggtcttcaacgtggatgcagctggtagttttcaaggctgttatggagctggagagctaggaatgggactcagtcaagttaaaatgctacaaaactcactgttcttacccggattcagctatttgtctttgataaattatccccagtttgctttttaaaagcctatttccacagttctgaaaaaggtgattctgattattttgccaatttttcattgtctttatgtagtagagaattttggtcaggggaagtccttagtctgccatttttgatgaTACTCTTTCCTTCCC--TTCTTTTTAGGCTTTTATTTTCATGAATCTCTTATCTGTTGGTGttttgttttgttttg----------tttt-------------------tt-----aaacagggtcttgttttgtcacccaggctagagtgcagtggtgtaatcatggcctactgcagct i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34739471 1709 + 59248254 gattacaggcacgtgtcaccacacgtggcttattttt-gtattttttagtagaaatggggtttccttctgttggcgaggctggtcttgaactcctgac--ctcaggtgatccgtctgcctcggcctcccaaagtgccaggattacaggcatgagccactgcacctggctgcataaacttatctttataaattatatGCTTCTAAATTATCAGGTGGACTGTGCCTTAAATGTATAGGCTTGAGTAggctgggcatggtgtctcacacctatactcccaacacttttagaggccaaggtaggaagatagcttgggattaggagttcaaggccagcgtggacaacatagtgagtaccctgtctctacaaaaaaaagcaaa----gaaaattaggtgggcatggtggtgcatgcctgaggtcctggcccctgaggaggctg-aggtggaggattgcttgagcccagaaggtcaaggctgcagtgagccatgattgcatgactatactccagtttgggtgacagagagggaccccatctctaaaaac-aaaaaaaGTAA----GTGAAATAAAATGAAAtatcattgctatcttttattaatattttgtgttttgggagccattattcctatattttccttacattttaaaaatgtggtttcttttagttttttgaacctacttaaattagctgacttaaactct---ttgttaagtcaaatatcttggcttcccttgggaagagttttcta---ttgttttttccctttatatgggctgtatttttttgtttctttgcatatcttccaattttttgttgaaaactgaacattttatt---ttattatttttagacagagtctcactctgtcacccatgctggagtgcagtggtgtgatccaagcaattctcgtgcttcaaccacctgagtag-tgggaccatgggtgggcgacatcacacctggctaa--ttattttggattattagtagagacagggtttcaccatgttggccaagctggtcttgaactcctaacctcaggtgatttgcccacatcagcctcccaaagccctgggattacaggcttgagcca-tgtggccaaccaactggacattttaaatgatgtaatgtggcagctctgaaaatcacattctcctccctctgcaggtgagctctcagtcaggtaaaatacagagatatttgcaaatggggtattttggggaaccaccagacaggtcaaataatgctaatttcttgggaatggtactttgaaggagctgtagcccagttctgcttcctctgctaactgccagtcttctggtcttcaacgtggatgcagctggtagttttcaaggctgttatggagctggagagctaggaatgggactcagtcaagttaaaatgctacaaaactcactgttcttacccggattcagctatttgtctttgataaattatccccagtttgctttttaaaagcctatttccacagttctgaaaaaggtgattctgattattttgccaatttttcattgtctttatgtagtagagaattttggtcaggggaagtccttagtctgccatatttgatgaTACTCTTTCCTTCCC--TTCTTTTTAGGCTTTTATTTTCATGAATCTCGTATCTGTTGGTGttttgttttgttttg----------tttt-------------------tt-----aaacagggtcttgttttgtcacccaggctagagtgcagtggtgtaatcatggcctattgcagct i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4613840 1709 - 13342542 gattacaggcacgtgtcaccacacgtggcttattttt-gtattttttagtagaaatggggtttccttctgttgccgaggctggtcttgaactcctgac--ctcaggtgatccgtctgcctcggcctcccaaagtgccaggattacaggcatgagccactgcacctggcTGCATAAACTTATCTTTGTAAATTATATGCTTCTAAATTATCAGGTGGACTGTGCCTTAAATGTATAGGCTTGAGTAggctgggcatggtgtctcacacctatactcccaacacttttagaggccaaggtaggaagatagcttgggattaggagttcaaggccagcgtggacaacatagtgagtaccctgtctctacaaaaaaaagcaaa----gaaaattaggtgggcatggtggtgcatgcctgaggtcctggcacctgaggaggctg-aggtggaggattgcttgagcccagaaggtcaaggctgcagtgagccgtgattgcatgactatactccagtttgggtgacagagagagaccccatctctaaaaac-aaaaaaaGTAA----GTGAAATAAAATGAAAtatcattgctatcttttattaatattttgtgttttgggagccattattcctatattttccttacattttaaaaatgtggtttcttttagttttttgaacctacttaaattagctgacttaaactct---ttgttaagtcaaatatcttggcttcccttgggaagagttttcta---ttgttttttccctttatatgggctgtatttttttgtttctttgcatatcttccaattttttgttgaaaactgaacattttatt---ttattatttttagacagagtctcactctgtcacccatgctggagtgcagtggtgtgatccaagcaattctcgtgcttcaaccacctgagtag-tgggaccatgggtgggcgacatcacacctggctaa--ttattttggattattagtagagacagggtttcaccatgttggccaagctggtcttgaactcctaacctcaggtgatttgcccacatcagcctcccaaagccctgggattacaggcttgagcca-tgtggccaaccaactggacattttaaatgatgtaatgtggcagctctgaaaatcacattctcctccctctgcaggtgagctctcagtcaggtaaaatacagagatatttgcaaatggggtattttggggaaccaccagacaggtcaaataatgctaatttcttgggaatggtactttgaaggagctgtagcccagttctgcttcctctgctaactgccagtcttctggtcttcaacgtggatgcagctggtagttttcaaggctgttatggagctggagagctaggaatgggactcagtcaagttaaaatgctacaaaactcactgttcttacccggattcagctatttgtctttgataaattatccccagtttgctttttaaaagcctatttccacagttctgaaacaggtgattctgattattttgccaatttttcattgtctttatgtagtagagaattttggtcaggggaagtccttagtctgccatttttgatgaTACTCTTTCCTTCCC--TTCTTTTTAGGCTTTTATTTTCATGAATCTCGTATCTGTTGGTGttttgttttgttttg----------tttt-------------------tt-----aaacagggtcttgttttgtcacccaggctagagtgcagtggtgtaatcatggcctactgcagct i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5536717 1713 + 7714307 gattacaggcacgtgtcaccacacatggcttattttt-gtattttttagtagaaatggggtttccttctgttggcgaggctggtcttgaactcctgac--ctcaggtgatccgtctgcctcggcctcccaaagtgccaggattacaggcgtgagccactgcagctggctgcataaa-ttatctttataaattatatGCTTCTAAATTATCAGGTGGACTGTGCCTTAAATGTATAGGCTTGAGTAggctgggcatggtgtcttacacctatactcccaacacttttagaggccaagg--------tagcttgggattaggagttcaaggccagtgtggacaacatagtgagtaccctgtctctacaaaaaaaagcaaa----gaaaattaggtgggcatggtggtgcatgcctgaggtcctggcccctgaggaggctg-agatggaggattgcttgagcccagaaggtcaaggctgcagtgagccatgattgcatgactatactccagtttgggtgacagagagagaccccatctctaaaaacaaaaaaaaGTAA----GTGAAATAAAATGAAAtatcattgctatcttttattaatattttgtggtttgggagccattattcctatattttccttacatttttaaaatgtggtttcttttagttttttgaacctacttaaattagctgacttaaactct---ttgttaagtcaaatatcttgggttcccttgggaagagttttcta---ttgttttttccctttatatgggctgtatttttttgtttctttgcatatcttccaattttttgttgaaaactgaacattttatt---ttattatttttagacagagtctcactctgtcacccatgctggagtgcagtggtgtgatccaagcaattctcgtgcttcaaccacctgagtag-tgggaccatgggtgggcgacatcacacctggctaa--ttattttggattattagtagagacagggtttcaccatgttggccaagctggtcttgaactcctaacctcaggtgatttgcccacatcagcctcccaaagccctgggattacaggcttgagcca-tgtgaccaaccaactggacattttaaatgatataatgtggcagctctgaaaatcacattctcctccctctgcaggtgagctctcagtcaggtaaaatacagagatatttgcaaatggggtattttggggaaccaccagacaggtcaaataatgctaatttcttgggaatggtactttgaaggagctgtagcccagttctgcttcctctgctaactgccagtcttctggtcttcaacgtggatgcagctggtagttttcaaggctattatggagctggagagctaggaatgggactcagtcaagttaaaatgctacaaaactcactgttcttacccggattcagctatttgtctttgataaattatcgccagtttgctttttaaaagcctatttccacagttctgaaaaaggtgattctgattattttgccaatttttcattgtctttatgtagtagagaattttggtcaggggaagtccttattctgccatttttgatgaTACTCTTTCCTTCCCCTTTCTTTTTAGGCTTTTATTTTCATGAATCTCGTATCTGTTGGTGttttgttttgttttgttttcttttttttt-------------------tt-----aaacagggtcttgttttgtcacccaggctagagtgcagtggtgtaatcatggcccactgcagct i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29339449 1715 + 50890351 gattacaggcacgtgtcaccacacgtggcttattttt-gtattttttagtagaaatggggtttccttctgttggcgaggctggtcttgaactcctgac--ctcaggtgatccgtctgcctcggcctcccaaagtgccaggattacaggcgtgagccactgcacccggctgcataaacttatctttataaattatatGCTTCTAAATTATCAGATGGACTGTGCCTTAAACGTATAGGCTTGAGTAggctgggcatggtgtctcacacctatactcccagcacttttagaggccaaggtaggaagatagcttgggattaagagttcaaggccagcgtggacaacatagtgagtaccctgtctctacaaaaaaaaccaaa----gaaaattaagtgggcatggtggtgcctgcctgaggtcctggcccctgaggaggctg-aggtggaggattgcttgagcccagaaggtcaaggctgcagtgagccatgattgcatgactatactccagtttgggtgacagagagagaccccatctctaaaaac-aaaaaaaGTAA----GTGAAATAAAATGAAAtatcattgctatcttttattaatattttgtgttttgggagccattattcctatattttccttacatttttaaaatgtggtttcttttagttttttgaacctacttaaattagctgacttaaactct---ttgttaagtcaaatatcttggcttcccttgggaagagttttcta---ttgttttttccctttatatgggctgta-ttttttgtttctttgcatatcttccaattttttgttgaaaactgaacattttatt---ttattatttttagacagagtctcactctgtcacccatgctggagtgcagtggtgtgatcc-agcaattctcgtgcctcaaccacctgagtagctgggaccacgggtgggcgacatcacacctggctaa--ttattttggattattagtagagacagggtttcaccatgttggccaagctggtcttgaactcctaacctcaggtgatttgcccacatcagcctcccaaagccctgggattacaggcttgagcca-tgtggccaaccaactggacattttaaatgatataatgtggcagctctgaaaatcacattctcctccctctgcaggtgagctctcagtcaggtaaaatacagagatatttgcaaatggggtattttggggaaccaccagacaggtcaaataatgctaatttcttgggaatggtactttgaaggagctgtagcccagttctgcttcctctgctaactgccagtcttctggtcttcaatgtggatgcaactggtagttttcgaggctattatggagctggagagctaggaatgggactcagtcaagttaaaatgctacaaaactcactgttcttacccggattcagctatttgtctttgataaattatccccagtttgctttttaaaagcctatttccacagttctgaaaaaggtgattccgattattttgccaatttttcattgtctttatgtagtagagaattttggtcaggggaagtccttattctgccatttttgatgatgCTCTTTCCTTCCCCTTTCTttttaggcttttattttcatgaatctcatatctgttggtgttttgttttgttttg-----ttttgtttt-------------------TT-----aaacaaggtcttgttttgtcacccaggctagagtacagtggtgtaatcatggcccactgcagct i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 972151 1676 - 2385121 gattacaggcacgtgtcaccacacatggcttattttt-gtattttttagtagaaatggggtttccttctgttggcgaggctggtcttgaactcctgac--ctcaggtgatccgtctgcctcggcctcccaaagtgccaggattacaggcgtgagccactgcacctggctgcataaa-ttatctttataaattatatGCTTCTAAATTATCAGGTGGACTGTGCCTTAAATGTATAGGCTTGAGTAggctgggcatggtgtctcacacctatactcccaacacttttagaggccaagg--------tagcttgggattaggagttcaaggccagtgtggacaacatagtgagtaccctgtctctacaaaaaaaagcaaa----gaaaattaggtgggcatggtggtgcatgcctgaggtcctggcccctgaggaggctg-aggtggaggattgcttgagcccagaaggtcaaggctgcagtgagccgtgattacatgactatactccagtttgggtgacagagagagaccccatctctaaaaacaaaaaaaaGTAA----GTGAAATAAAATGAAAtatcattgctatcttttattaatattttgtgttttgggagccattattcctatattttccttacatttttaaaatgtggtttcttttagttttttgaacctacttaaattagctgacttaaactct---ttgttaagtcaaatatcttggcttcccttgggaagagttttcta---ttgttttttccctttatatgggctgtatttttttgtttctttgcatatcttccaattttttgttgaaaactgaacattttatt---ttattatttttag--agagtctcactctgtcacccatgctggagtgcagtggtgtgatccaagcaattctcgtgcttcaaccacctgagtag-tgggaccatgggtgggcgacatcacacctggctaa--ttattttggattattagtagagacagggtttcaccatgttggccaagctggtcttgaactcctaacctcaggtgatttgcccacatcagcctcccaaagccctgggattacaggcttgagcca-tgtgaccaaccaactggacattttaaatgatataatgtggcagctctgaaaatcacattctcctccctctgcaggtgagctctcagtcaggtaaaatacagagatatttgcaaatggggtattttggggaaccaccagacaggtcaaataatgctaatttcttgggaatggtactttgaaggagctgtagcccagttctgcttcctctgctaactgccagtcttctggtct-----------------------------ggctgttatggagctggagagctaggaatgggactcagtcaagttaaaatgctacaaaactcactgttcttacccggattcagctatttgtctttgataaattatccccagtttgctttttaaaatcctatttccacagttctgaaaaaggtgattctgattattttgccaatttttcattgtctttatgtagtagagaattttggtcaggggaagtccttattctgccatttttgatgaTACTCTTTCCTTCCCCTTTCTTTTTAGGCTTTTATTTTCATGAATCTCGTATCTGTTGGTGttttgttttgtttt------ttttttttt-------------------tt-----aaacagggtcttgttttgtcacccaggctagagtgcagtggtataatcatggcccactgcagct i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2414071 1713 + 4274983 gattacaggcacgcgtcaccacacgtggcttattttt-gtattttttagtagaaatggggtttccttctgttggcgaagctggtctcaaactcctgac--ctcaggtgatccgtctgcctcggcctcccaaagtgccaggattacaagcgtgagccactgcgcccggcTGCATAAACTTATCTTTATAAATTATATGCTTCTAAATTATCAGGTGGACTGTGCCTTAAATGTATAGGCTTGAGTAggctgggcatggtggctcacacctatactcccaacacttttagaggccaaggtaggaagatagcttgggattaggagttcaaggccagcgtggacaacatagtgagtaccctgtctctacaaaaaaaagaaaa----gaaaattatgtaggcatggtggtgcatgcctgaggtcctggcccctgaggaggctg-aggtggaggattgcttgagcccagaaggtcaaggctgcaatgggccgtgactgcatgactatactccagtttgggtgacagagagagaccccatctctaaaaac-aaaaaaaGTAA----TTGAAATAAAATAAAAT---attgctatcttttattaatattttgtgttttgggagccattattcttatattttccttacatttttaaaatgtggtttcttttagttttttgaacctacttaaattagctgacttaaactct---ttgttaagtcgaatatcttggcttcccttgggaagagtttt-ta---ttgttttttccctttatatgggctgtatgtttttgtttctttgcatatcttccaattttttgttgaaaactggacattttatt---ttattatatttagacagagtctcactctgtcgcccatgctggagtgcagtggtgtgatccaagcaattatcgtgcctcaaccacctgagtagctgggaccacgggtgggcgacatcacacctggctaa--tttttttggattattagtagagacagggtttcaccatgttggccaagctggtctcgaactcctaacctcaggtgatttgctcacatcagcctcccaaagtactgggattataggcctgagcca-tgtggccagccaactggacattttaaatgatgtaatgtagcagctctgaaaatcacattctcctccctctgcaggtgagctctcagtcaggtaaaatacagagatatttgcaaatggggtactttggggaaccaccagacaggtc-aataatgctaatttcttgggaatggtactttgaaggagctgtagcccagttctgcttcctctgctaactgccagtcttctggtcttcaatgtggatgcagctggtagttttcaaggctattatggagctagagagctaggaatgggactcagtcaagttaaaatgctacaaaactcactgttcttacccagattcagctatttgtctttgataaattatctccagtttg----ttaaaagcctatttccacagttctgaaaaaggtgattctgattattttgccaatttttcattgtctttatgtagtagagaattttggtcaggggaaatccttattctgccatttttgatgaTACTCTTTCCTTCCCCTTTCTTTTTAGGCTTTTATTTTCATGAATCTTGTATCTGTTGGTGttttgttttgttttctttttttttttttt-------------------tt-----aaacagggtcttgttttgtcccccaggctagagtgcagtggtgtaatcatggcccactgcagct i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=662154.000000 s hg38.chr19_GL383574v1_alt 150526 136 + 155864 taaaactcctgggctcaagtgatactgctccctcagcctcccaagtagcagagactacaggtgcacaccaccatgaccagctaattttttaaattttttgtagagatggggtcttgctctgttgttcagactagtc s panTro5.chr19 36218041 136 + 61309027 tcaaactcctgggctcaagtgatcctgctccctcagcctcccaagtagcagagactacaggtgcacaccaccatgaccagctaatttttaaaattttttgtagagatggggtcttgctctgttgttcagactagtc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39962261 136 + 64411610 tcaaactcctgggctcaagtgatcctgctccctcagcctcccaagtagcagagactacaggtgcacaccaccatgaccagctaatttttaaaattttttgtagagatggggtcttgctctgttgttcagactagtc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6373500 136 - 8369475 tcaaactcctgggctcaagtgatcctgctccctcagcctcccaagtagcagagactacaggtgcacaccaccatgaccagctaattttttaaattttttgtagagatggggtcttgctctgttgttcagactagtc i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30287014 136 + 53671032 ccgaactcctgggctcaagtgatcctgcttcctcagcctcccaagtagtggggactacaggtgcacaccaccatgaccagctaattttttaaattttttgtagagatggcgtcttgccctgttgttcagactagtc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34741180 136 + 59248254 ccgaactcctgggctcaagtgatcctgcttcctcagcctcccaagtagtggggactacaggtgcacaccaccatgaccagctaattttttaaattttttgtagagatggcgtcttgccctgttgttcagactagtc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4615549 136 - 13342542 ccgaactcctgggctcaagtgatcctgcttcctcagcctcctaagtagtggggactacaggtgcacaccaccatgaccagctaattttttaaattttttgtagagatggcgtcttgccctgttgttcagactagtc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5538430 136 + 7714307 tcgaactcctgggctcaagtgatcctgcttcctcagcctcccaagtagtggggactacaggtgcacaccaccatgaccagctaattttttaaattttttgtagagatggcgtcttgccctgttgttcagactagtc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29341164 136 + 50890351 tcgaactcctgggctcaagtgatcctgcttcctcagcctcccaagtagtggggactacaggtgcacaccaccatgaccagctaatttttaaaattttttgtagagatggcatcttgccctgttgttcagactagtc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 973827 136 - 2385121 tcgaactcctgggctcaagtgatcctgcttcctcagcctcccaagtagtggggactacaggtgcacactaccatgaccagctaattttttaaattttttgtagagatggcgtcttgccctgttgttcagactagtc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2415784 136 + 4274983 tcgaactcctgggctcaaatgatcccgcttcctcagcctcccaagtagtggggattacaggtgcacaccaccatgaccagctaatttttttaattttttgtagagatggcatcttgccctgttgttcagactagtc i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e nomLeu3.chr10 63972115 0 - 106955855 C a score=1823438.000000 s hg38.chr19_GL383574v1_alt 150662 338 + 155864 tcaaattcctggcctcaagcgatcctcttgtctcagcctttcaaagtgctgggattacaggcttgagccactacacccagcctaatttttgtatatgatgtgaggtcggggtccagattcatt-ttttcatgtggatatttagttgtcccatcaccatttattgaagagactgttctttccccactggatgtttttggcatcctggtctaaaatcagttgactgtagatgtatgggtttatttctggacttctaattctactccattgatttatacatctttccttatgccagtatttcactgctttggttactatagctttatagtagattttgaaat s panTro5.chr19 36218177 333 + 61309027 tcaaattcctggcctcaagcgatcctcttgtctcagcccttcaaagtgctgagattacaggcctgagccactacacccagcctaatttttgtatatgatgtgaggtcggggtccagattcatt-ttttcatgtggatatttagttgtcccatcaccatttattgaagagactgttctttccccattggatatttttggcatcctggtctaaaatcagttgactgtagatgtatgggtttatttctggacttctaattctaatccattgatttatacatctt-----atgccagtatttcactgctttggttactatagctttatagtagattttgaaat i panTro5.chr19 C 0 C 0 s panPan2.chr19 39962397 333 + 64411610 tcaaattcctggcctcaagcgatcctcttgtctcagcccttcaaagtgctgagattacaggcttgagccactacacccagcctaatttttgtatatgatgtgaggtcggggtccagattcatt-ttttcatgtggatatttagttgtcccatcaccatttattgaagagactgttctttccccattggatatttttggcatcctggtctaaaatcagttgactgtagatgtatgggtttatttctggacttctaattctaatccattgatttatacatctt-----atgccagtatttcactgctttggttactatagctttatagtagattttgaaat i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6373636 338 - 8369475 tcaaattcctggcctcaagcgatccacttgtctcagcccttcaaagtgctgggattacaggcttgagccactacacccagcctaatttttgtatatgatgtgaggtcggggtccagattcatt-ttttcatgtggatatttagttgtcccatcaccatttattgaagagactgttctttccccactggatgtttttggcatcctggtctaaaatcagttgactgtagatgtatgggtttatttctggacttctaattctactccattgatttatacatctttccttatgccagtatttcactgctttggttactatagctttatagtagattttgaaat i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63972115 338 - 106955855 tctaactcctggcctcaagcgatcctcttgtctcagcccttcaaagtgctgggattacaggcttgagccactacacccagcctaatttttgtatatgatgtgaggtc-gggtccagattcattcttttcatgtgaatatttagttgtcccttcaccatttattgaagagactgttctttccccattggatgtttttggcatcctggtctaaaatcagttgactatagatgtatgggtttatttctggacttctaattctactccattgatgtatacatctttccttatgccagtatttcactgttttggttactatagctttatagtagattttgaaat i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30287150 329 + 53671032 tcaaattcctggcctcaagcgatccacctgtctcagcccttcaaagtgctgggattacaggcttgagccactaca-ccAGCC---------tatacgatgtgaggtcagggttcagattcattcttttcatgtggatatttagttttcccatcactatttattgaagagacttttctttccccattggatatttttggcatcctggtctaaaatcagttgactgtagatgtttgagtttatttctggacttctaattctactccattgatttatgcatctttcgttatgccagtatttcactgctttgattactatagccttatagtagattttgaaat i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34741316 329 + 59248254 tcaaattcctggcctcaagcgatccacctgtctcagcccttcaaagtgctgggattacaggcttgagccactaca-ccAGCC---------tatacgatgtgaggtcagggttcagattcattcttttcatgtggatatttagttttcccatcactatttattgaagagacttttctttccccattggatatttttggcatcctggtctaaaatcagttgactgtagatgtttgggtttatttctggacttctaattctactccattgatttatgcatctttcgttatgccagtatttcactgctttgattactatagccttatagtagattttgaaat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4615685 329 - 13342542 tcaaattcctggcctcaagcgatccacctgtctcagcccttcaaagtgctgggattacaggcttgagccactaca-ccAGCC---------tatacgatgtgaggtcagggttcagattcattcttttcatgtggatatttagttttcccatcactatttattgaagagacttttctttccccattggatatttttggcatcctggtctaaaatcagttgactgtagatgtttgggtttatttctggacttctaattctactccattgatttatgcatctttcgttatgccagtatttcactgctttgattactatagccttatagtagattttgaaat i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5538566 329 + 7714307 tcaaattcctggcctcaagcgatccacctgtctcagcccttcaaagtgctgagattacaggcttgagccactaca-ccAGCC---------tatacgatgtgacgtcgggtttcagattcattcttttcatgtggatatttagttttcccatcactatttattgaaaagacttttctttccccattggatatttttgacatcctggtctaaaatcagttgactgtagatgtttgggtttatttctggacttctaattctactccattgatttatgcatctttcattatgccagtatttcactgctttgattgctatagccttatagtagattttgaaat i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29341300 329 + 50890351 tcaaattcctggcctcaagtgatccacctgtctcagcccttcaaagtgctgggattacaggcttgagccactaca-ccagcc---------tatacgatgtgaggtcggggttcagattcattcttttcatgtggatatttagttttcccatcactatttattgaagagacttttctttccccattggatatttttggcatcctggtctaaaatcagttgactgtagatgtttgggtttatttccggacttctaattctactccattgatttatgcatctttcgttatgccagtatttcactgctttgattactatagccttatagtagattttgaaat i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 973963 329 - 2385121 tcaaattcctggcctcaagcgatccacctgtctcagcccttcaaagtgctgggattacaggcttgagccactaca-ccAGCC---------tatacgatgtgacgtcggggttcagattcattcttttcatgtggatatttagttttcccatcactatttattgaaaagacttttctttccccattggatatttttggcatcctggtctagaatcagttgactgtagatgtttgggtttatttctggacttctaattctactccattgatttatgcatctttcgttatgccagtatttcactgctttgattactatagccttatagtagattttgaaat i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2415920 308 + 4274983 tcaaattcctggcttcaagcgatcctcctatctcagcccttcaaagtgctgggattacaggctggagccactaca-ccAGCC---------tatacaatgtgaggtcggggttcagattcattctttt---------------------catcaccatttattgaagagactgttctttccccattggatgtttttggcatcctggtctaaaatcagttgactgtagatgtttgggtttatttctggacttctaattctactccattgatttatgcatctttcattatgccagtatttcactgctttgattactatagccttatagtagattttgaaat i colAng1.NW_012111697v1 C 0 I 316 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=425897.000000 s hg38.chr19_GL383574v1_alt 151000 77 + 155864 caggaaatattacttttacaaca-ttttttctttcagtatttgttttagtcatcctggatccctcgc--ttt-----tTTTTTTT s panTro5.chr19 36218510 82 + 61309027 caggaaatattacttttacaaca-ttttttctttcagtatttgttttagtcatcctggatccctcgc--tttATTTTTTTTTTTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39962730 79 + 64411610 caggaaatactacttttacaaca-ttttttctttcagtatttgttttagtcatcccggatccctcgc--TCT---TTTTTTTTTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6373974 82 - 8369475 caggaaatattacttttacaaca-ttttttctttcagtatttgttttaatcatcctggatccctcgc--ttttTTGTTTTTTTTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63972453 81 - 106955855 taggaaatattacttttacaaca-ttttttctttcagtatttgttttggtcatcctggatccctcgc--ttt-tTTTTTTTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30287479 77 + 53671032 caggaaatatgacttttacaacg-ttttttctttcagtatttgttttggtcatcctggatccctcgc--ttt-----tTTTTTTT i rheMac8.chr19 C 0 I 5 s macFas5.chr19 34741645 77 + 59248254 caggaaatatgacttttacaacg-ttttttctttcagtatttgttttggtcatcctggatccctcgc--ttt-----tTTTTTTT i macFas5.chr19 C 0 I 5 s macNem1.NW_012011689v1 4616014 77 - 13342542 caggaaatatgacttttacaacg-ttttttctttcagtatttgttttggtcatcctggatccctcgc--ttt-----tTTTTTTT i macNem1.NW_012011689v1 C 0 I 1136 s cerAty1.NW_012005268v1 5538895 77 + 7714307 caggaaatatgacttttacaacg-ttttttctttcagtatttgttttggtcatcctggatccctcgc--ttt-----tTTTTTTT i cerAty1.NW_012005268v1 C 0 I 6 s chlSab2.chr6 29341629 80 + 50890351 caggaaatatgacttttacaacgtttttttctttcagtatttgttttggtcatcctggatccctcgcttttt-----tttttttt i chlSab2.chr6 C 0 I 7 s manLeu1.NW_012102454v1 974292 77 - 2385121 caggaaatatgacttttacaacg-ttttttctttcagtatttgttttggtcatcctggatccctcgc--ttt-----tTTTTTTT i manLeu1.NW_012102454v1 C 0 I 7 s colAng1.NW_012111697v1 2416544 77 + 4274983 caggaaatatgacttttacaaca-ttttttctttcagtatttgttttggtcatcctggatccctcgc--ttt-----tTTTTTTT i colAng1.NW_012111697v1 I 316 I 2 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=1333984.000000 s hg38.chr19_GL383574v1_alt 151077 237 + 155864 CTTGCGTCA-GTTTGTTTGTACAAATAGCACAGGAGGATCCCCGCCCCATGCAGACGGCAGCCCGAGGGGGTCGCAGCAGTCCTTCTGTTCTCACATTTGTAGACAGAGATATCTACTCTGAAGCCTTTGTAGGGGCCTGGGCACCTTTGggagcttgagctggaactgaagctggagctgcagtctggGCGCTGATTTGATCCTTGGC----CTTGGCCTTTAGCCGGCACAGCCTGAGTC s panTro5.chr19 36218592 237 + 61309027 CTTGCCTCA-GTTTGTTTGTACAAATAGCACAGGAGGATCCCCACCCCATGCAGACGGCAGCCCGAGGGGGTCGCACCAGTCCTTCTGTTCTCACATTGGTAGACAGAGATATCTACTCTGAAGCCTTTGTAGGGGCCTGGGCACCTTTGggagctcgagctggaactgaagctggagctgCATTCTGGGCGCTGATTTGATCCTTGGC----CTTGGCCTTTGGCCGGCACAGCCTGAGTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39962809 237 + 64411610 CTTGCCTCA-GTTTGTTTGTACAAATAGCACAGGAGGATCCCCACCCCATGCAGACGGCAGCCCGAGGGGGTCGCACCAGTCCTTCTGTTCTCACATTGGTAGACAGAGATATCTACTCTGAAGCCTTTGTAGGGGCCTGGGCACCTTTGggagctcgagctggaactgaagctggagctgCATTCTGGGCGCTGATTTGATCCTTGGC----CTTGGCCTTTGGCCGGCACAGCCTGAGTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6374056 237 - 8369475 CTTGCCTCA-GTTTGTTTGTACAAATAGCACAGGAGGATCCCCGCCCCATGCAGACGGCAGCCCGAGGGGGTTGCACCAGTCCTTCTCTTCTCACATTGGTAGACAGAGATATCTACTCTGAAGCCTTTGTAGGGGCCTGGGCACCTTTGggagcttgagctggaactgaagctggagctgcagtctggGCGCTGATTTGATCCTTGGC----CTTGGCCTTTGGCCGGCACAGCCTGAGTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63972534 234 - 106955855 CTTGCCTCAGGTTTATTTGTACAAATAGCACAGGAGGATCCCCGCCCCATGCAGACGGCAGCCCGAGGGGGTCGCACCAGTCCTTCTGTTCTTACACTGGT----AGAGATATCTACTCTGAAGCCTCTGTAGGGGCCTGGGCACCTTTGggagcctgagctggaactgaagctggagatgcagcctgggcgctggtttgatccttggc----cttggcctttggcGAGCACAGCCTGAGTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30287561 242 + 53671032 CTTGCCTCAGGTTTATATGTACAGATAGCACAGGAGGACCCCAGCCCCATGCAGATGGCAGCCCGAGGGGTTCACACCAGTCCTTCTGTTCTCACATTGGTAGACAGAGATACCTACTCTGAAGCCTTTATAGGGGCCTGGGCACCTTTGGGAGCCTGAGCTGGAACTGAAGCTGGAGCTGCAGCCTGGGCCTTGGTTTGATCCTTGGCCTTGCTTGGCCTTTGGCTGGCACAGCCTGAGTA i rheMac8.chr19 I 5 C 0 s macFas5.chr19 34741727 242 + 59248254 CTTGCCTCAGGTTTATATGTACAGATAGCACAGGAGGACCCCAGCTCCATGCAGATGGCAGCCCGAGGGGTTCACACCAGTCCTTCTGTTCTCACATTGGTAGACAGAGATACCTACTCTGAAGCCTTTATAGGGGCCTGGGCACCTTTGGGAGCCTGAGCTGGAACTGAAGCTGGAGCTGCAGCCTGGGCCTTGGTTTGATCCTTGGCCTTGCTTGGCCTTTGGCTGGCACAGCCTGAGTA i macFas5.chr19 I 5 C 0 s macNem1.NW_012011689v1 4617227 242 - 13342542 CTTGCCTCAGGTTTATATGTACAGATAGCACAGGAGGACCCCAGCCCCATGCAGATGGCAGCCCGAGGGGTTCACACCAGTCCTTCTGTTCTCACATTGGTAGACAGAGATATCTACTCTGAAGCCTTTATAGGGGCCTGGGCACCTTTGggagcctgagctggaactgaagctggagctgcagcctgggccttggtttgatccttggccttgcttggcctttggctggcACAGCCTGAGTA i macNem1.NW_012011689v1 I 1136 C 0 s cerAty1.NW_012005268v1 5538978 242 + 7714307 CTTGCCTCAGGTTTATATGTACAGATAGCACAGGAGGACCCCAGCCCCATGCAGATGGCAGCCCGAGGGGTTCACACCAGTCCTTCTGTTCTCACATTGGTAGACAGAGATACCTACTCTGAAGCCTTTATAGGGGCCTGGGCACCTTTGGGAGCCTGAGCTGGAACTGAAGCTGGAGCTGCAgcctgggccttgatttgatccttggccttgcttggcctttggcTGGCACAGCCTGAGTA i cerAty1.NW_012005268v1 I 6 C 0 s chlSab2.chr6 29341716 242 + 50890351 cttGCCTCAGGTTTATATGTACAGATATCACAGGAGGACCCCAGCCCCATGCAGATGGCAGCCCAAGGGGGTCACACCAGTCCTTCTGTTCTCACATTGGTAGACAGAGATACCTACTCTGAAGCCTTTATAGGGACCTGGGCACCTTTCggagcctgagctggaactgaagctggagctgcagGctaggccttggtttgatccttggccttgcttggcctttggcTGGCACAGCCTGAGTA i chlSab2.chr6 I 7 C 0 s manLeu1.NW_012102454v1 974376 242 - 2385121 CTTGCCTCAGGTTTATATGTACAGATAGCACAGGAGGACCCCAGCCCCATGCAGATGGCAGCCCGAGGGGTTCACACCAGTCCTTCTGTTCTCACATTGGTAGACAGAGATACCTACTCTGAAGCCTTTATAGGGGCCTGGGCACCTTTGggagcctgagctggaactgaagctggagctgcagcctgggccttgatttgatccttggccttgcttggcctttggctggcACAGCCTGAGTA i manLeu1.NW_012102454v1 I 7 C 0 s colAng1.NW_012111697v1 2416623 242 + 4274983 CTTGCCTCAGGTTTATATGTACAGATAGCACAGGAGGACCCCAGCCCCGTGCAGATGGCAGCCCGAGGGGGTCACACCAGTCCTTCTGTTCTCACATTGGTAGACAGAGATACCTACTCTGAAGCCTTTGTAGGGGCCTGGGCACCTTTGGGAGCCTGAGCTGTAACTGAAGCTGGAGCTGCAGTctgggccttggtttgatccttggccttgcttggcctttggcTGGCACAGCCTGAGTA i colAng1.NW_012111697v1 I 2 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=760160.000000 s hg38.chr19_GL383574v1_alt 151314 153 + 155864 CCTTGGCAGTGCGGGCACGAGCACACTTCCCAAGCTTGGGGTGGGCAATGTAGGCAAGTCGATCGAGCTTGTGGCTGACACCCTTTGGGATCTTGGGCTTAACCTCCTTGGGCTTTACGAGGGCCTTGATAGCCTCGGCACGTGCACTCATGG s panTro5.chr19 36218829 153 + 61309027 CCTTGGCAGTGCGGGCACGAGCACACTTCCCAAGCTTGGGGTGGGCAATGTAGGCAAGTTGATTGAGCTTGTGGCTGACACCCTTTGGGATCTTGGGCTTAACCTCCTTGGGCTTTACGAGGGCCTTGATAGCCTCGGCACGTGCACTCATGG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39963046 153 + 64411610 CCTTGGCAGTGCGGGCACGAGCACACTTCCCAAGCTTGGGGTGGGCAATGTAGGCAAGTCGATTGAGCTTGTGGCTGACACCCTTTGGGATCTTGGGCTTAACCTCCTTGGGCTTTACGAGGGCCTTGATAGCCTCGGCACGTGCACTCATGG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6374293 153 - 8369475 CGTTGGCAGTGCGGGCACGAGCACACTTCCCAAGCTTGGGGTGGGCAATGTAGGCAAGTCGATCGAGCTTGTGGCTGACACCCTTTGGGATCTTGCGCTTAACCTCGTTGAGCTTTATGAGGGCCTTGATAGCCTCGGCACGTGCACTCATGG i gorGor5.CYUI01015150v1 C 0 C 0 s rheMac8.chr19 30287803 153 + 53671032 CCTTGGCAATGCGGGCACGAGCACACTTCCCAAGCTTGGGGTGGGCAATGTAGACAAGTCGATCGAGCTTGTGGCTGACACCCTTTGGGATCTTGGGCTTAATCTCCTTGGGCTTTACGAGGGCCTTGATAGCCTCGGCACATGCACACATGG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34741969 153 + 59248254 CCTTGGCAATGCGGGCACGAGCACACTTCCCAAGCTTGGGGTGGGCAATGTAGACAAGTCGATCGAGCTTGTGGCTGACACCCTTTGGGATCTTGGGCTTAATCTCCTTGGGCTTTACGAGGGCCTTGATAGCCTCGGCACGTGCACACATGG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4617469 153 - 13342542 CCTTGGCAATGCGGGCACGAGCACACTTCCCAAGCTTGGGGTGGGCAATGTAGACAAGTCGATCGAGCTTGTGGCTGACACCCTTTGGGATCTTGGTCTTAATCTCCTTGGGCTTTACGAGGGCCTTGATAGCCTCGGCACGTGCACACATGG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5539220 153 + 7714307 CCTTGGCAATGCGGGCACGAGCACACTTCCCAAGCTTGGGGTGGGCAATGTAGACAAGTCGATGGAGCTTGTGGCTGACACCCTTTGGGATCTTGGGCTTAATCTCCTTGGGCTTTACGAGGGCCTTGATAGCCTCGGCACGTGCACACGTGG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29341958 153 + 50890351 CCTTGGCAGTGCGGGCATGAGCACACTTCCCAAGCTTGGGGTGGGCAATGTAGACAAGTCGATCGAGCTTGTGGCTGACACCCTTTGGGATCTCGGGCTTAATCTCCTTGGGCTTTACGAGGGCCTTGATAGCCTTGGCACGTGCACACATGG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 974618 153 - 2385121 CCTTGGCAATGCGGGCACGAGCACACTTCCCAAGCTTGGGGTGGGCAATGTAGACAAGTCGATGGAGCTTGTGGCTGACACCCTTTGGGATCTTGGGCTTAATCTCCTTGGGCTTTACGAGGGCCTTGATAGCCTCGGCACGTGCACACGTGG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2416865 153 + 4274983 CCTTGGCAGTGCGGGCACGAGCACACTTTCCAAGCTTGGGGTGGGCAATGTAGACAAGTCGATCGAGCTTGTGGCTGACACCCTTTGGGATCTCGGGCTTAATCTCCTTGGGTTTTACGAGGGCCTTGATAGCCTCGTCACGTGCACGCATGG i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I e nomLeu3.chr10 63972768 0 - 106955855 C a score=1280462.000000 s hg38.chr19_GL383574v1_alt 151467 234 + 155864 CCTTGGCATTGTTGGCCTGCATCTTCTTGAGGCCCTTC---TTGTGCTTCTTGGCAAAGTGCATGTTCCTCAGGAACCTGGGGTCCATCCACTTAAGAGATTTGTATCTTTGTGATCGGGGTTTCTTGATAGCATTTCTGTGCCATTTTCGGGACTGGTTGTGTGTGGTATGGTTCTTGGACTTGGCCCTGTCTGTACCTTAAGCCGCAGCTCCCGAAGCACCTAGAACTGGAACCC s panTro5.chr19 36218982 234 + 61309027 CCTTGGCATTGTTGGCTTGCATCGTCTTGAGGCCCTTC---TTGTGCTTCTTGGCAAAGTGCATGTTCCTCAGGAACCTGGGGTCCACCCACTTAAGAGATTCATATCTTTGTGATCGGGGTTTCTTGATAGCATTTCTGTGCCATTTTCGGGACTGGTTGTGTGTGGTATGGTTCTTGGACTTGGCCCTGTCTGTACCTTAAGCCGCAGCTCCCGAAGCACCTAGAACTGGAACCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39963199 234 + 64411610 CCTTGGCATTGTTGGCTTGCATCATCTTGAGGCCCTTC---TTGTGCTTCTTGGCAAAGTGCATGTTCCTCAGGAACCTGGGGTCCACCCACTTAAGAGATTCGTATCTTTGTGATCGGGGTTTCTTGATAGCATTTCTGTGCCATTTTCGGGACTGGTTGTGTGTGGTATGGTTCTTGGACTTGGCCCTGTCTGTACCTTAAGCCGCAGCTCCCGAAGCACCTAGAACTGGAACCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6374446 234 - 8369475 CCTTGGCATTGTTGGCCTGCATCTTCTTGAGGCCCTTC---TTGTGCTTCTTGGCAAAGTGCATGTTCCTCAGGAACCTGGGGTCCACCCACTTAAGAGATTCGTATCTTTGTGATCGGGGTTTCTTGATAGCATTTCTGTGCCATTTTCGGGACTGGTTGTGTGTGGTATGGTTCTTGGACTTGGCCCTGTCTGTACCTTAAGCCGCAGCTCCCGAAGCGCCTAGAACTGGAACCC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63972768 237 - 106955855 CCTTGGCATTGTTGGCCTGCATCTTCTTTAGGCCCTTCTTGTTGTGCTTCTTGGCAAATTGCATGTTCCTCAAGAACCTGGGCTCCACCCACTTAAGAGATTCGTATCTTTGTGATCGGGGTTTCTTGATAGCATTTCTGTGCCATTTTCGGTACTGGTTGTGTGTGGTATGGTTCTTGGATTTGGCCCTGTCTGTACCTTAAGCCGCAGCTCCCGAAGCACCTAGAACTGGAACCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30287956 235 + 53671032 CCTTGGCATTGTTGACCTGCATCTTCTTTAGGCCCTTTTTGTTGTGCTTCTTGGCAAAGTGCATGTTCCTCAGGAACCTGGGGTCCACTC-CTTAAGAGATTCGTATCTTTGTAATC-GGATTTCTTAATACCATTTCTGTGCCATTTTCGGGACTGGTTGTGTTTGGTGTGGTTCTTGGTCTTGGCCGTGTCTGTACCTTAAGCCCCAGCTCCTGAAGCACCTAGAACCGGAACCC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34742122 235 + 59248254 CCTTGGCATTGTTGACCTGCATCTTCTTTAGGCCCTTTTTGTTGTGCTTCTTGGCAAAGTGCATGTTCCTCAGGAACCTGGGGTCCACTC-CTTAAGAGATTCGTATCTTTGTAATC-GTATTTCTTAATACCATTTCTGTGCCATTTTCGGGACTGGTTGTGTTTGGTGTGGTTCTTGGTCTTGGCCGTGTCTGTACCTTAAGCCCCAGCTCCTGAAGCACCTAGAACCGGAACCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4617622 228 - 13342542 CCTTGGCATTGTTGACCTGCATCTTCTTTAGGCCCTTTTTGTT-TGCTTCTTGGCAAAGTGCATGTTCCTCAGGAACCTGGGGTCCACTC-CTTAAGAGATTCGTATCTTTGTAATC-GGATTTCTTAATATCATTTCTGTGCCATTTTCGGGACTGGTTGTGTTTGGTGTGGTTCTTGGTCT------TGTCTGTACCTTAAGCCCCAGCTCCTGAAGCACCTAGAACCGGAACCC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5539373 235 + 7714307 CCTTGGCATTGTTGACCCGCATCTTCTTTAGGCCCTTTTTGTTGTGCTTCTTGGCAAAGTGCATGTTCCTCAGGAACCTGGGGTCCACTC-CTTAAGAGATTCGTATCTTTGTAATC-GGATTTCTTAATACCATTTCTGTGCCATTTTCAGGACTGGTTGTGTTTGGTGTGGTTCTTGGTCTTGGCCGTGTCTGTACCTTAAGCCCCAGCACCTGAAGCACCTAGAACCGGAACCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29342111 235 + 50890351 CCTTGGCATTGTTGACCTGCATCTTCTTTAGGCCCTTTTTGTTGTGCTTCTTGGCAAAGTGCATGTTCCTCAGGAACCTGGGGTCCACTC-CTTAAGAGATTCGTATCTTTGTAATC-AGATTTCTTAATACCATTTCTGTGCCATTTTCGGGACTGGTTGTGTTTGGTGTGGTTCTTGGACTTGGCCATGTCTGTACCTTAAGCCCCAGCTCCTGAAGCACCTAGAACCGGAACCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 974771 235 - 2385121 CCTTGGCATTGTTGACCCGCATCTTCTTTAGGCCCTTTTTGTTGTGCTTCTTGGCAAAGTGCATGTTCCTCAGGAACCTGGGGTCCACTC-CTTAAGAGATTCGTATCTTTGTAATC-GGATTTCTTAATACCATTTCTGTGCCATTTTCGGGACTGGTTGTGTTTGGTGTGGTTCTTGGTCTTGGCCGTGTCTGTACCTTAAGCCCCAGCACCTGAAGCACCTAGAACTGGAACCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2417018 235 + 4274983 CCTTGGCATTGTTGACCTGCATCTTCTTTAGGCCCTTTTTGTTGTGCTTCTTGGCAAAGTGCATGTTCCTCAGGAACCTGGGGTCCACCC-CTTAAGAGATTCGTATCTTTGTGATT-GGGTTTCTTGATGCTATTTCTGTGCCATTTTCGGGACTGGTTGTGTTTGGTGTGGTTCTTGGTCTTGGCCATGTCTGTACCTTAAACCCCAGCTCCTGAAGCACCTAGAACTGGAACCC i colAng1.NW_012111697v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I e saiBol1.JH378197 5471523 3180 + 8899380 I e calJac3.chr22 28617745 2511 + 49145316 I a score=216315.000000 s hg38.chr19_GL383574v1_alt 151701 32 + 155864 TCACATTTTTATATG-ATTTTAGGGCtttgttt---------- s panTro5.chr19 36219216 32 + 61309027 TCACATTTTTATATG-ATTTTAGGGCtttgttt---------- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39963433 32 + 64411610 TCACATTTTTATATG-ATTTTAGGGCtttgttt---------- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6374680 31 - 8369475 TC-CATTTTTATATG-ATTTTAGGGCtttgttt---------- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63973005 33 - 106955855 TCACATTTTTATATGAATTTTAGGGCtttgttt---------- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30288191 33 + 53671032 TCACATTTTTATATGAATTTTAAGGCtttgttt---------- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34742357 33 + 59248254 TCACATTTTTATATGAATTTTAAGGCtttgttt---------- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4617850 33 - 13342542 TCACATTTTTATATGAATTTTAAGGCtttgttt---------- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5539608 33 + 7714307 TCACATTTTTATATGAATTTTAAGGCtttgttt---------- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29342346 33 + 50890351 TCACATTTTTATATGAATTTTAAGGCtttgttt---------- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 975006 33 - 2385121 TCACATTTTTATATGAATTTTAAGGCtttgttt---------- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2417253 33 + 4274983 TCACATTTTTATATGAATTTTAAGGCTCTGttt---------- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28620256 43 + 49145316 TCACATTTTTTTATGAATTTTAGGACTTAGTTTTAtcttcttt i calJac3.chr22 I 2511 C 0 s saiBol1.JH378197 5474703 43 + 8899380 TCACATTTTTATATGAATTTTAGGACTTAGTTTTATCAtcttt i saiBol1.JH378197 I 3180 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I e cebCap1.NW_016107633v1 1675006 7141 - 2680843 I a score=1683046.000000 s hg38.chr19_GL383574v1_alt 151733 196 + 155864 tatttttggggacagagtcttgcagtgttgcccaggctgctcttagactcctgggctcaagtgatgttctcaccttggccacctctaagtacctaggacagcaggcatgcactaccactcctggcttccaaatgaattttggggtcagcttgcccatttctgtagaaaaggtaattgaaattttgaggccggcatg s panTro5.chr19 36219248 196 + 61309027 tatttttggggacagagtcttgcagtgttgcccaggctgctcttagactcctgggctcaagtgatgttctcaccttggccacctctaagtatctaggacagcaggcatgcactaccactcctggcttccaaatgaattttggggtcagcttgcccatttctgtagaaaaggtaattcaaattttgaggctggcacg i panTro5.chr19 C 0 C 0 s panPan2.chr19 39963465 196 + 64411610 tatttttggggacagagtcttgcagtgttggccaggctgctcttagactcctgggctcaagtgatgttctcaccttggccacctctaagtatctaggacagcaggcatgcactaccactcctggcttccaaatgaattttggggtcagcttgcccatttctgtagaaaaggtaattcaaattttgaggccggcacg i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6374711 194 - 8369475 tatttttggggac--agtcttgcagtgttgcccaggctgctcttagactcctgggctcaagtgatgttctcaccttggccacctttaagtatctaggacagcaggcatgcactaccactcctggcttccaaatgaattttggggtcagcttgcccatttctgtagaaaaggtaattcaaattttgaggccggcatg i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63973038 193 - 106955855 tatttttagggac--agtcttgcagtgttgcccaggctgctcttagactcctgggctcaagtgaggctctcaccttggccacctctaagtagctaggacagcaggcatgcacta-cactcctggcttccaaatgaattttggtgtcagcttgcccatttctgtagaaaaggtaattcaaattttgaggccggcacg i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30288224 196 + 53671032 tatttttagatacagagtcttgcagtgttgcccaggctgctcttagactcctgggctccagtgatgctctcaccttggccacctctaagtagctagaacagcaggcatgcgctaccattcctggtttccaaatgaattttggggtcagcttgcccatttctgtagaaaaggtaattcaaattttgaggccggcgca i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34742390 196 + 59248254 tatttttagatacagagtcttgcagtgttgcccaggctgctcttagactcctgggctccagtgatgctctcaccttggccacctctaagtagctagaacagcaggcatgcgctaccattcctggtttccaaatgaattttggggtcagcttgcccatttctgtagaaaaggtaattcaaatttcgaggctggcgca i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4617883 196 - 13342542 tatttttagatacagagtcttgcagtgttgcccaggctgctcttagactcctgggctccagtgatgctctcaccttggccacctctaagtagctagaacagcaggcatgcgctaccattcctggtttccaaatgaattttggggtcagcttgcccatttctgtagaaaaggtaattcaaattttgaggccggcgca i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5539641 196 + 7714307 tatttttagatacagagtcttacagtgttgtccaggctgctcttagactcctgggctccagtgatgctctcaccttggccacctctaagtagctagaacagcaggcatgcgctaccattcctggtttccaaatgaattttggggtcagcttgcccatttctgtagaaaaggtaattcaaattttgaggccggcgca i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29342379 196 + 50890351 tatttttagatacagagtcttgcagtgttgcccaggctgctcttagactcctgggctccagtgatgctctcaccttggccacctctaagtagctagaacagcaggcatgcactaccactcctggtttccaaatgaattttggggtcagcttgcccatttctgtagaaaaggtaattcaaattttgaggccggcgca i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 975039 196 - 2385121 tatttttagatacagagtcttacagtgttgcccaggctgctcttagacttctgggctccagtgatgctctcaccttggccacctctaagtagctagaacagcaggcatgcgctaccattcctggtttccaaatgaattttggggtcagcttgcccatttctgtagaaaaggtaattcaaattttgaggccggcgca i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2417286 196 + 4274983 tatttttagagacagagtcttgcagtgttgcccaggctgctcttagactcctgggctccagtgatgctctcaccttgcccacctctaagtagctagaacagcaggcatgcactaccactcctggtttcaaaatgaattttggggtcaacttgcccatttctctagaaaaggtaattcaaattttgaGGCCAgcaca i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28620299 194 + 49145316 tatttttagagacagggtcttgcaatgttgcccaggctgctcttaaactcctgggctcaggtgatgctctcaccttggccac--gtaagtagctaggacttcaggcatgtactaccactcctggcttcccaatggattttggggtcagcttgtctatttctgtataaaaagtagtttaaattttgaggccagctca i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5474746 194 + 8899380 tatttttagagacagggtcttgcagtgttgcccaggctgctcttgaactcctgggctcaggtgatgctctcaccttgcccac--gtaagtagctagaactgcaggcatatactaccactcctggtttccaaatgaattttggggtcagcttgcctatttctgtataaaaagtagtttagattttgaggccagctca i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1682147 194 - 2680843 tatttttagagacagggtcttgcaatgttgcccagactgctcttgaactcctgggctcaggtgatgctctcaccttggccat--gtaagtagctaggactgcaggcatgtactaccactcctggcttccgaatgaattttggggtcagcttgcctatttctgtataaaaaatagtttaaattttgaggccagctca i cebCap1.NW_016107633v1 I 7141 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e aotNan1.NW_018505377v1 421220 2694 - 4471408 I a score=1032934.000000 s hg38.chr19_GL383574v1_alt 151929 114 + 155864 gtggctcacgcctgtaattccagcactttgggaggccgaggtgggtggatcacttgaggccaggagtttgagacc-----ggcctggccaatatggcgaaacctcatctctactaaaaa s panTro5.chr19 36219444 114 + 61309027 gtggctcacgcctgtaattccagcactttgggaggccgaggtgtgtggatcacttgaggccaggagtttgagacc-----ggcctggccaatatggcgaaacctcatctctactaaaaa i panTro5.chr19 C 0 C 0 s panPan2.chr19 39963661 114 + 64411610 gtggctcacgcctgtaattccagcactttgggaggccgaggtgtgtggatcacttgaggccaggagtttgagacc-----ggcctggccagtatggcgaaacctcatctctactaaaaa i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6374905 114 - 8369475 gtggctcatgcctgtaattccagcactttgggaggccgaggtgggtggatcacttgaggccaggagtttgagacc-----ggcctagccaatatggcgaaacctcatctctactaaaaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63973231 114 - 106955855 gtggctcacgcctgtaattccagcactttgggaggctgaggtgggtggatcacttgaggccaggagtttgagacc-----agcctggccaatatggcgaagcctgatctctactgaaaa i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30288420 114 + 53671032 gtgactcatgcctgtaatcccagcactttgggaagccgaggtgggtggatcacttgaggccaggagtttgagacc-----agcctggccaacatggcaaaatctcatctctactaaaaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34742586 114 + 59248254 gtgactcatgcctgtaatcccagcactttgggaagccgaggtgggtggatcacttgaggccaggagtttgagacc-----agcctggccaacatggcaaaatctcatctctactaaaaa i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4618079 114 - 13342542 gtgactcatgcctgtaatcccagcactttgggaagccgaggtgggtggatcacttgaggccaggagtttgagacc-----agcctggccaacatggcaaaatctcatctctactaaaaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5539837 114 + 7714307 atgactcatgcctgtaatcccagcactttgggaagccgaggtgggtggatcacttgaggccaggagtttgagacc-----agcctggccaacatggcaaaacctcatctctactaaaaa i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29342575 114 + 50890351 gtgactcatgcctgtaatcccagcactttgggaagccgaggtgagtggatcacttgaggccaggagtttgagacc-----agcctggccaacatggcaaaacctcatttctactaaaaa i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 975235 114 - 2385121 atgactcatgcctgtaatcccagcactttgggaagccgaggtgggtggatcacttgaggccaggagtttgagacc-----agcctggccaacatggcaaaacctcatctctactaaaaa i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2417482 114 + 4274983 gtgactcatgcctgtaatcccagcactttgggaggccgaggtgggtggatcagttgaggccaggagtttgagacc-----agcctggccaacatggcaaaacctcatctctactaaaaa i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28620493 68 + 49145316 gtggctcacgcctgtaatcccagcactctgggaggctg---------------------------------------------------aatgtggtgaaaccccatctctactaaaat i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5474940 114 + 8899380 gaggctcatgcctgtaatcccagcactctgggaggccgaggtggatgcatcacttgaggccaggagtgtgagacc-----aacctggccaatgtggtgaaaccccatctctactaaaaa i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1682341 114 - 2680843 gtggctcatgcctgtaatcccagcactttgaggggccgaggtggatggattacttgaggccaggagtgtgagacc-----aacctggccaatgtggtgaaaccccatctctactgaaaa i cebCap1.NW_016107633v1 C 0 I 71 s aotNan1.NW_018505377v1 423914 117 - 4471408 gtggctcaagcctgtagtcccagcactttgcgaggccgaggcgggtggatcac--gaggtcaagagatcgagaccatcctatcctggtcaacatggtgaaaccccgtctctactgaaaa i aotNan1.NW_018505377v1 I 2694 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I a score=96550.000000 s hg38.chr19_GL383574v1_alt 152043 15 + 155864 tacaaaaaattagcc s panTro5.chr19 36219558 15 + 61309027 tacaaaaaattagcc i panTro5.chr19 C 0 C 0 s panPan2.chr19 39963775 15 + 64411610 tacaaaaaattagcc i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6375019 15 - 8369475 tacaaaaaattagcc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63973345 15 - 106955855 tacaaaaaattagcc i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30288534 15 + 53671032 tacaaaaacttagcc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34742700 15 + 59248254 tacaaaaacttagcc i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4618193 15 - 13342542 tacaaaaacttagcc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5539951 15 + 7714307 tacaaaaacttagcc i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29342689 15 + 50890351 tacaaaaacttagcc i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 975349 15 - 2385121 tacaaaaacttagcc i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2417596 15 + 4274983 tacaaaaaattagcc i colAng1.NW_012111697v1 C 0 I 311 s calJac3.chr22 28620561 9 + 49145316 aacagaa------ct i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5475054 9 + 8899380 aacaaaa------ct i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 424031 15 - 4471408 tacaaaaaattagct i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e cebCap1.NW_016107633v1 1682455 71 - 2680843 I a score=441696.000000 s hg38.chr19_GL383574v1_alt 152058 60 + 155864 aggcactgtgacg--cgcacctgtaatcccagctacttgggaggctgaggcaggagaatcac s panTro5.chr19 36219573 62 + 61309027 aggcactgtgacgtgcgcgcctgtaatcccagctacttgggaggctgaggcaggagaatcac i panTro5.chr19 C 0 C 0 s panPan2.chr19 39963790 62 + 64411610 aggcactgtgacgtgcgcgcctgtaatcccagctacttgggaggctgaggcaggagaatcac i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6375034 60 - 8369475 aggcactgtgacg--cgcgcctgtaatcccagctacttgggaggctgaggcaggagaatccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63973360 60 - 106955855 aggcactgtggcg--catgcctgtaatcccagctgcttgggaggctgaggcaggagaatcac i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30288549 60 + 53671032 gggcgttgtggcg--cgcgcctgtaatcccagctacttgggagactgaggcaggagaatcac i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34742715 60 + 59248254 gggcgttgtggta--cgcgcctgtaatcccagctacttgggagactgaggcaggagaatcac i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4618208 60 - 13342542 gggcgttgtggcg--cgcgcctgtaatcccagctacttgggagactgaggcaggagaatcac i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5539966 60 + 7714307 gggcgttgtggcg--cgcgcctgtaatcccagctacttgggagactgaggcaggagaatcac i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29342704 60 + 50890351 gggcgttgtggca--cgcgcctgtaatcccagctacttgggagactgaggcgggagaatcac i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 975364 60 - 2385121 gggcgttgtggca--cgcgcctgtaatcccagctacttgggagactgaggcaggagaatcac i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28620570 60 + 49145316 gggtgttgtggtg--catgtctgtaatcccagctacttgggaggctgaggcgggagagtcac i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5475063 60 + 8899380 gggcgttgtgtcg--catgcctgtaatcccagctacttgggaggctgaggcaggagagtcac i saiBol1.JH378197 C 0 C 0 s aotNan1.NW_018505377v1 424046 60 - 4471408 gggcatggtggtg--catgcctgtaatcccagctactcaggaggctgaggcaggagaattgc i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e cebCap1.NW_016107633v1 1682455 71 - 2680843 I e colAng1.NW_012111697v1 2417611 311 + 4274983 I a score=631767.000000 s hg38.chr19_GL383574v1_alt 152118 76 + 155864 ttgaactctggaggtggaggttgcagtgagctgagattgtgccactgcactccagactgggcgac-agagcacaact s panTro5.chr19 36219635 76 + 61309027 ttgaactctggaggtggaggttgcagtgagctgagattgtgccactgcactccagactgggcgac-agagcacaact i panTro5.chr19 C 0 C 0 s panPan2.chr19 39963852 76 + 64411610 ttgaactctggaggtggaggttgcagtgagctgagattgtgccactgcactccagactgggcgac-agagcacaact i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6375094 76 - 8369475 ttgaactctggaggtggaggttgcagtgagctgagattgtgccactgcactccagactgggcgac-agagcacaact i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63973420 76 - 106955855 ttgaactctgtaggtggaggttgcagtgagctgagattgtgccactgcactccagactgggcgac-agagcacaact i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30288609 76 + 53671032 ttgaaccctggaggtggaggttgccatgagctgagatagcgacactgcactccagactgggggac-agagcacaact i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34742775 76 + 59248254 ttgaaccctggaggtggaggttgccatgagctgagatagcgacactgtactccagactgggcgac-agagcacaact i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4618268 76 - 13342542 ttgaaccctggaggtggaggttgccatgagctgagatagcgacactgcactccagactgggcgac-agagcacaact i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5540026 76 + 7714307 ttgaaccctggaggtggaggttgccatgagctgagatcgcgacactgcactccagactgggcgac-agagcacaact i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29342764 76 + 50890351 ttgaaccctggaggtggaggttgccatgagctaagattgcgacactgcactccagactgggcgac-agggcacaact i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 975424 76 - 2385121 ttgaaccctggaggtggaggttgccatgagctgagatcgcgacactgcactcctgactgggtgac-agagcacaact i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28620630 76 + 49145316 ttggatcccagaggtggaggttgcagtgagctgaaattgtgctactgtactccagcctgggcaac-agagcacaact i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5475123 76 + 8899380 ttgaatcccagaggtggaggttgcagtgagctgaaattgtggcactgcactccagcctgggtgac-agagcacaact i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1682526 76 - 2680843 ttgaatcccagaggtggaggttgcagtgagctgaaattgtgccactgcactccagcctgggcgac-agagcacgact i cebCap1.NW_016107633v1 I 71 I 38 s aotNan1.NW_018505377v1 424106 77 - 4471408 ctgaacccaggaggcggaggttgcggtgagctgagatcgtgccattgcactccagcctgggtaacaaaagtgaaact i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e colAng1.NW_012111697v1 2417611 311 + 4274983 I a score=45048.000000 s hg38.chr19_GL383574v1_alt 152194 22 + 155864 ctgtctcaaaaaaaaaaa--------------------------------tatt s panTro5.chr19 36219711 22 + 61309027 ctgtctcaaaaaaatata--------------------------------tatt i panTro5.chr19 C 0 C 0 s panPan2.chr19 39963928 22 + 64411610 ctgtctcaaaaaaaaata--------------------------------tatt i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6375170 22 - 8369475 ctgtctcaaaaaaaaaaa--------------------------------aatt i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63973496 20 - 106955855 ctgtttcaaaaaaaaaa----------------------------------ctt i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30288685 35 + 53671032 ctgtccccaaaaaaaaaaa-------------------aaaaaaattttttttt i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34742851 35 + 59248254 ctgtctcaaaaaaaaaaaa-------------------aaaaaatttttttttt i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4618344 35 - 13342542 ctgtctcaaaaaaaaaaaa-------------------aaaaaatttttttttt i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5540102 32 + 7714307 ctgtctcaaaaaaaaaaaa-------------------aaaaa---tttttttt i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29342840 29 + 50890351 ctgtctcaaaaaaaaaaaa-------------------aaa------ttttttt i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 975500 35 - 2385121 ctgtctcaaaaaaaaaaaa-------------------aaaaaaaatttttttt i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28620706 32 + 49145316 --gtctcaaataaataaat-------taaaaaaaaaagaaa------------- i calJac3.chr22 C 0 I 5 s saiBol1.JH378197 5475199 39 + 8899380 --gtctcaaataaataactaaataaataaaaataaaagaaa------------- i saiBol1.JH378197 C 0 I 1 s aotNan1.NW_018505377v1 424183 22 - 4471408 ccgtctcaaaaaaataaat-------------------aaa------------- i aotNan1.NW_018505377v1 C 0 I 32 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e cebCap1.NW_016107633v1 1682602 38 - 2680843 I e colAng1.NW_012111697v1 2417611 311 + 4274983 I a score=763046.000000 s hg38.chr19_GL383574v1_alt 152216 86 + 155864 ttgataaaaattgtgttgaatctgtagatgaatttggtgaaatagtataactttaagcattataagtttCATTTAGAGAAAGTTTG s panTro5.chr19 36219733 86 + 61309027 ttgataaagattgtgttgaatctgtagatgaatttggtgaaatagtataactttaagcattataagtttCATTTAGAGAAAGTTTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39963950 86 + 64411610 ttgataaagattgtgttgaatctgtagatgaatttggtgaaatagtataactttaagcattataagtttCATTTAGAGAAAGTTTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6375192 86 - 8369475 ttgataaagattgtgttgaatctgtagatgaatttggtgaaatagtataactttaagcattataagtttCATTTAGAGAAAGTTTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63973516 86 - 106955855 ttgataaagattgtgttgaatctgtagatgaatttggtgaaatagtatAACTTCAAGCATTGTAAGTTTCATTTAGAGAAAGTTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30288720 86 + 53671032 ttgatagagattgtgttgaatctgtggatgaatttggtgaaatagtataactttaagcattataagtttCATTTAGAGAAAGTTTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34742886 86 + 59248254 ttgatagagattgtgttgaatctgtggatgaatttggtgaaatagtataactttaagcattataagtttCATTTATAGAAAGTTTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4618379 86 - 13342542 ttgatagagattgtgttgaatctgtggatgaatttggtgaaatagtataactttaagcattataagtttCATTTAGAGAAAGTTTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5540134 86 + 7714307 ttgatagagattgtgttgaatctgtggatgaatttggtgaaatagtataactttaagcattatgagttTCATTTAGAGAAAGTTTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29342869 74 + 50890351 ttgatagagattgtgttgaatctgtggatgaatttggtgaAATAGTATAACTTTAAG------------CATTTAGAGAAAGTTTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 975535 86 - 2385121 ttgatagagattgtgttgaatctgtggatgaatttggtgaaatagtataactttaagcattataagtttCATTTAGAGAAAGTTTG i manLeu1.NW_012102454v1 C 0 C 0 s calJac3.chr22 28620743 86 + 49145316 ttgatggagattgtgttgaatctgtggattaatttggtgaaataatataattttaagcattgtaagtttCATTTAGAGAAAGTTTG i calJac3.chr22 I 5 C 0 s saiBol1.JH378197 5475239 86 + 8899380 ttaatagagattgtgttgaatctgtagatgaatttggtgaaataatataattttaagcattttaagtttCATTTAGAGAAAGTTTG i saiBol1.JH378197 I 1 C 0 s cebCap1.NW_016107633v1 1682640 86 - 2680843 ttgatagagattgtgttgaatctgtagatgaatttggtgaaataatataattttaagcattgtaagtttCATTTAGAGAAAGTTTG i cebCap1.NW_016107633v1 I 38 C 0 s aotNan1.NW_018505377v1 424237 86 - 4471408 ttgatagagattgtgttgaatctgtatatgaatttggtgaAATAATATAATTGTAAGCATTGTAAGTTTCGTTTAGAGAAAGTTTG i aotNan1.NW_018505377v1 I 32 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I e colAng1.NW_012111697v1 2417611 311 + 4274983 I a score=6112821.000000 s hg38.chr19_GL383574v1_alt 152302 643 + 155864 GAAGTATGTAAAGTGAAAAAGAGTTTAATGTTTGTGGTTTTTT--AATTAGGTAAGCATATAGGTCTCACTTGGTCTTCCAGATCTGTCAAAGGAATGGGGGCAGGCTCTCCTAGAGCCAGAGGCAG-CCGCGGTAGAGGAACTAGGAAGCTGGTGCACCACTGAACAAAGATAGAGTGTTTCTCAGGGCTGCATAAGACACTCACTGTGGCCAACTCAGGTGAAGGTTTTCCTTCAGAGGCCACAGAGTCTCCACGGGAACAGCCT-GCCCCGCTTCAGCATTCCTGTAGAGTGCTTCTGTTGTATATCAGAATCTATAAATTGTGGAGCACTCGGGTGGGGATAGATGTGATTGCCTTATTTGTCATGAATTTGAAAAAAGAAAACATTTTGGAACACATTTTTTACAAGTAGCCATTTGATATTTGTTTCTTGAAAAGTTTATGAGATTTTTTTTAAAGAGCTCAAATTTTGTTGAACATAGAGCCATAAATAATGGTTGTTTTATTGACTTTATATGTTATGTGTTTGTATCCACAGTGTCCTTCTCATCTCTTGCCTTTGTAACCTACCTAATTCCTGTGTTGCCAACACAATCATAGAAATACAAAGGAATTATGGTAATTGGCCATAAGTGACGAAGTAT s panTro5.chr19 36219819 643 + 61309027 GAAGTATGTAAAGTGAAAAAGAGTTTAATGTTTGTGGTTTTTT--AATTAGGTAAGCATACAGGTCTCATTTGGTCTTCTAGATCTATCAAAGGAATGGGGGCAGGCTCTCCTAGAGCCAGAGGCAG-CCGCGGTAGAGGAACTAGGAAGCTGGTGCACCACTGAACAAAGATAGAGTGTTTCTCAGGGCTGCATAAGACACTCACTGTGGCCAACTCAGGTGAAGGTTTTCCTTCAGAGGCCACAGAGTCTCCACGGGAACAGCCT-GCCCCCCTTCAGCATTCCTGTAGAGTGCTTCTGTTGTATATCAGAATCTATAAATTGTGGAGGACTCGGGTGGGGATAGATGTGATTGCCTTATTTGTCATGAATTTGAAAAAAGAAAACATTTTGGAACACATTTTTTACAAGTAGCCATTTGATATTTGTTTCTTGAAAAGTTTATGAGATTTTTTTTAAAGAGCTCAAATTTTGTTGAACATAGAGCCATAAATAGTGGTTGTTTTATTGACTTTATATGTTATGTGTTTGTATCCACAGTGTTCTTCTCATCTCTTGCCTTTGTAACCTACCTAATTCCTGTGTTGCCAACACAATCATAGAAATACAAAGGAATTATGGTAATTGGCCATAAGTGACGAAGTAT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39964036 643 + 64411610 GAAGTATGTAAAGTGAAAAAGAGTTTAATGTTTGTGGTTTTTT--AATTAGGTAAGCATACAGGTCTCATTTGGTCTTCTAGATCTATCAAAGGAATGGGGGCAGGCTCTCCTAGAGCCAGAGGCAG-CCGCGGTAGAGGAACTAGGAAGCTGGTGCACCACTGAACAAAGATAGAGTGTTTCTCAGGGCTGCATAAGACACTCACTGTGGCCAACTCAGGTGAAGGTTTTCCTTCAGAGGCCACAGAGTCTCCACGGGAACAGCCT-GCCCCCCTTCAGCATTCCTGTAGAGTGCTTCTGTTGTATATCAGAATCTATAAATTGTGGAGGACTCGGGTGGGGATAGATGTGATTGCCTTATTTGTCATGAATTTGAAAAAAGAAAACATTTTGGAACACATTTTTTACAAGTAGCCATTTGATATTTGTTTCTTGAAAAGTTTATGAGATTTTTTTTAAAGAGCTCAAATTTTGTTGAACATAGAGCCATAAATAGTGGTTGTTTTATTGACTTTATATGTTATGTGTTTATATCCACAGTGTTCTTCTCATCTCTTGCCTTTGTAACCTACCTAATTCCTGTGTTGCCAACACAATCATAGAAATACAAAGGAATTATGGTAATTGGCCATAAGTGACGAAGTAT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6375278 642 - 8369475 GAAGTATGTAAAGTGAAAAAGAGTTTAATGTTTGTGGTTTTTT--AATTAGGTAAGCATATAGGTCTCACTTGGTCTTCTAGATCTGTCAAAGGAATGGGGGCAGGCTCTTCTAGAGCCAGAGGCAG-CCGCGGTAGGGGAACTAGGAAGCTGGTGCACCACTGAACAAAGATAGAGTGTTTCTCAGGGCTGCATAAGACACTCACTGTGGCCAACTCAGGTGAGGGTTTTCCTTCAGAGGCCACAGAGTCTCCACGGGAACAGCCT-GCCCCGCTTCAGCATTCCTGTAGAGTGCTTCTGTTGTATATCAGAATCTATAAATTGTGGAGCACTCGGGTGGGGATAGATGTGATTGCCTTATTTGTCATGAATTTGAAAAAAGAAAACATTTTGGAACACATTTTTTACAAGTAGCCATTTGATATTTGTTTCTTGAAAAGTTTATGAGATTTTTTTTAAAGAGCTCAAATTTTGTTGAACATAGAGCCATAAATAGTGGTTGTTTTATTGACTTTATATGTTATGTGTTTGTATCCACAGTGTTCTTCTCATCTCTTGCCTTTGTAACCTACCTAATTCCTGTGTTGCCAACACAATCATAGAAATACAAAGGAATTATGGTAATTGGCCATAAG-GACGAAGTAT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63973602 640 - 106955855 GAAGTATGTAAAGTGAAAAAGAGTTTAATGTTTGTGGTTTTTT--AATTAGGTAAGCATATAGGTCTCACTTGGTCTTCTAGATCTGTCAAAGGAATGGGGGCAGGCTCCCCTAGAGCCAGAGGCAG-CCGCGGTAGAGGAACCAGGAAGCTGGTGCACCACTGAACAAAGATAGAGTGCCTCTCAGGGCTGCATAAGACACTCACTGTGGCCAACTCAGGTGAAGGTTTTCCTTCAGAGGCCACAGAGTCTCCACGGGAACAGCCT-CCCCCGCTTCAGCATTCCTGTAGAGTGCTTCTGTTGTACATCAGAATCTGTAAATTGTGGAGCACTTGGGTGGGGATAGATGTGATTGCCTTATTTGTTATGAATTTGAAAAA--AAAACATTTGGGAATACATTTTTTACAAGTAGCCATTTGATATTTGTTTCCTGAAAAGTTTATGAGA-TTTTTTTAAAGAGCTCAAATTTTGTTGAACATAGAGCCATAAATAGTGGTTGTTTTATTGACTTTATATGTTATGTGTTTGTATCCACAGTGTTCTTCTCATCTCTTGCCTTTGTAACCTACCTAATTCCTGTGTTGCCAACACAATCATAGAAATACAAAGGAATTACGGTAATTGGACATAAGTGACGAAGTAT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30288806 640 + 53671032 GAAGTATGTAAAGTGAAAA--AGTTCAGTGTTTGTGATTTTTT--AATTAGGTAAGCATATAGGTCCCACTTGGCCTTCTAGATCTGTCAAAGGAATGGGGGCAGGCTCTCCTAGAGCCACAGGCAGCCCGCGGAATAGGAACTAGGAAGCTGGTGCACCACTGAACAAAGATAGAGTGCTTCTCAGGGCTGCCTAAGACTCTCACTGTGGCCAACTCAGGTGAAGGTTTTCCTTCAGAGGCTACAGAGTCTCCACGGGAACATCCT-GCCCCCCTTCAGCATTCCTGTAGAGTGCTTCTGTTGTATATCAAAACCTGTAAATTGTGGAGCACTCAGGTGGGGATAGATATGATTGCCTTATTTGTCATGAATTTGAAAAAAGAAAACATTTGGGAACATGTTTTTTACAAGTAGCCATTTGATATTTGTTTCCTGAAAAGTTTATGAGA-TTTTTTAAAGGAGCTCAAATTTTGTTGAACATAGAGCCATAAATAGTGGTTGTTTTATTGACTTTATATG-TATGTGTTTGTATCCACAGTGTTCTTCTCATTTCTTGCCTTTGTAATGTACCTAATTCCTGTGTTGCCAACACAATCATAGAAATACAAAGGAATTATGGTAATTGGCCGTAAGTGATGAAGTAT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34742972 640 + 59248254 GAAGTATGTAAAGTGAAAA--AGTTCAGTGTTTGTGATTTTTT--AATTAGGTAAGCATATAGGTCCCACTTGGCCTTCTAGATCTGTCAAAGGAATGGGGGCAGGCTCTCCTAGAGCCACAGGCAGCCCGCGGAATAGGAACTAGGAAGCTGGTGCACCACTGAACAAAGATAGAGTGCTTCTCAGGGCTGCCTAAGACTCTCACTGTGGCCAACTCAGGTGAAGGTTTTCCTTCAGAGGCTACAGAGTCTCCACGGGAACATCCT-GCCCCCCTTCAGCATTCCTGTAGAGTGCTTCTGTTGTATATCAAAACCTGTAAATTGTGGAGCACTCAGGTGGGGATAGATATGATTGCCTTATTTGTCATGAATTTGAAAAAAGAAAACATTTGGGAACATGTTTTTTACAAGTAGCCATTTGATATTTGTTTCCTGAAAAGTTTATGAGA-TTTTTTTAAGGAGCTCAAATTTTGTTGAACATAGAGCCATAAATAGTGGTTGTTTTATTGACTTTATATG-TATGTGTTTGTATCCACAGTGTTCTTCTCATTTCTTGCCTTTGTAATGTACCTAATTCCTGTGTTGCCAACACAATCATAGAAATACAAAGGAATTATGGTAATTGGCCGTAAGTGATGAAGTAT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4618465 640 - 13342542 GAAGTATGTAAAGTGAAAA--AGTTCAGTGTTTGTGATTTTTT--AATTAGGTAAGCATATAGGTCCCACTTGGCCTTCTAGATCTGTCAAAGGAATGGGGGCAGGCTCTCCTAGAGCCACAGGCAGCCCGCGGAATAGGAACTAGGAAGCTGGTGCACCACTGAACAAAGATAGAGTGCTTCTCAGGGCTGCCTAAGACTCTCACTGTGGCCAACTCAGGTGAAGGTTTTCCTTCAGAGGCTACAGAGTCTCCACGGGAACATCCT-GCCCCCCTTCAGCATTCCTGTAGAGTGCTTCTGTTGTATATCAAAACCTGTAAATTGTGGAGCACTCAGGTGGGGATAGATATGATTGCCTTATTTGTCATGAATTTGAAAAAAGAAAACATTTGGGAACATGTTTTTTACAAGTAGCCATTTGATATTTGTTTCCTGAAAAGTTTATGAGA-TTTTTTTAAGGACCTCAAATTTTGTTGAACATAGAGCCATAAATAGTGGTTGTTTTATTGACTTTATATG-TATGTGTTTGTATCCACAGTGTTCTTCTCATTTCTTGCCTTTGTAATGTACCTAATTCCTGTGTTGCCAACACAATCATAGAAATACAAAGGAATTATGGTAATTGGCCGTAAGTGATGAAGTAT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5540220 639 + 7714307 GAAGTATGTAAAGTGAAAA--AGTTCAATGTTTGTGATTTTTT--AATTAGATAAGCATATAGGTCCCACTTGGCCTTCTAGATCTGTCAAA-GAATGGGGGCAGGCTCTCCTAGAGCCACAGGCAGCCCGCGGAATAGGAACTAGGAAGCTGGTGCACCACTGAACAAAGATAGAGTGCTTCTCAGGGCTGCCTAAGACTCTCACTGTGGCCAACTCAGGTGAAGGTTTTCCTTCAGAGGCTACAGAGTCTCCACGGGAACATCCT-GCCCCCCTTCAGCATTCCTGTAGAGTGCTTCTGTTGTGTATCAAAACCTGTAAATTGTGGAGCACTCAGGTGGGGATAGATATGATTGCCTTATTTGTCATGAATTTGAAAAAAGAAAACATTTGGGAACATGTTTTTTACAAGTAGCCATTTGATATTTGTTTCCTGAAAAGTTTATGAGA-TTTTTTTAAGGAGCTCAAATTTTGTTGAACATAGAGCCATAAATAGTGGTTGTTTTATTGACTTTATATG-TATGTGTTTGTATCCACAGTGTTCTTCTCATTTCTTGCCTTTGTAACGTACCTAATTCCTGTGTTGCCAACACAGTCATAGAAATACAAAGGAATTATGGTAATTGGCTGTAAGTGATGAAGTAT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29342943 640 + 50890351 GAAGTATGTAAAGTGAAAA--AGTTCAATGTTTGTGATTTTTT--AGTTAGGTAAGCATATAGGTCCCACTTGGCCTTCTAGATCTGTCAAAGGAATGGGGGCAGGCTCTCCTAGAGCCACAGGCATCCCGCGGTATAGGAACTAGGAAGCTGGTGCACCACTGAACAAAGATAGAGTGCTTCTCAGGGCTGCCTAAGACTCTCACTGTGGCCAACTCAGGTGAAGGTTTTCCTTCAGAGGCTACAGAGTCTCCATGGGAACATCCT-GCCCCCCTTCAGCATTCCTGTAGAGTGCTTCTGTTGTATATCAAAACCTGTAACTTGTGGAGCACTCAGGTGGGGATAGATATGATTGCCTTATTTGTCATGAATTTGAAAAAAGAAAACATTTGGGAACATGTTTTTTACAAGTAGCCATTTGATATTTGTTTCCTGAAAAGTTTATGAGG-TTTTTTTAAGGAGCTCAAATTTTGTTGAACGTAGAGCCATAAATAGTGGTTGTTTTATTGACTTTCTATG-TATGTGTTTGTATCCACAGTGTTCTTCTCATTTCTTGCCTTTGTAATGTACCTAATTCCTGTGTTGCCAACACAATCATAGAAATACAAAGGAATTATGGTAATTGGCCGTAAGTGATGAAGTAT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 975621 632 - 2385121 GAAGTATGTAAAGTGAAAA--AGTTCAATGTTTGTGATTTTTT--AACTAGGTAAGCATGTAGGTCCCACTTGGCCTTCTAGATCTGTCAAA-GAATGGGGGCAGGCTCTCCTAGAGCCACAGGCAGCCCGCGGAATAGGAACTAGGAAGCTGGTGCACCACTGAACAAAGATAGAGTGCTTCTCAGGGCTGCCTAAGACTCTCACTGTGGCCAACTCAGGTGAAGGTTTTTCTTCAGAGGCTACAGAGTCTCCATGGGAACATCCT-GCCCCCCTTCAGCATTCCTGTAGAGTGCTTCTGTTGTATATCAAAACCTGTAAATTGTGGAGCACTCAGGTGGGGATAGATATGATTGCCTTATTTGTCATGAATTTGAAAAAAGAAAACATTTGGGAACATGTTTTTTACAAGTAGCCATTTGATATTTGTTTCTTGAAAAGTTTATGA-G-TTTTTTTAAGGAGCTCAAATTTTGTTGAACATAGAGCCATAAATAGTGGTTGTTTTATTGACTT-------TATGTGTTTGTATCCACAGTGTTCTTCTCATTTCTTGCCTTTGTAACGTACCTAATTCCTGTGTTGCCAACACAATCATAGAAATACAAAGGAATTATGGTAATTGGCCGTAAGTGATGAAGTAT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2417922 637 + 4274983 gaaGTATGTAAAGTGAAAAAGAGTTCAATGTTTGTGATTTTTT--AATTAGGTAAGCGTATAGGTCCCACTTGGCCTTCTAGATCTGTCAAAGGAATGGGGGCAGCCTCTCCTAGAGCCACAGGCAGTCCGTGGTATAGGAACTAGGAAGCTGGTGCACCACTGAACAAAGATAGAGTGCTTCTCAGGCCTGCCTAAGACTCTCACTGTGGCCAACTCAGGTGAAGGTTTTCCTTCAGAGACCACAGAGTCTCCATGGGAACAGCCT-G-CCCGCTTCAGCATTCCTGTAGAGTGCTTCTGTTGTACATCAGAACCTGTAAATTGTGGAGCACTCGGGTGGGGATAGATATGATTGCCTTATTTGTCATGAATTTGAAAAAAGAAAACGTTTGGGAACACATTTTTTACAAGTAGCCATTTGATATTTGTTTCCTGAAAAGTTTATGAGA-TTTTTTTAAAGAGCTCAAATTTTATTGAACATAGAGCCATAAATGGTGG----TTTATTGACTTTATATG-TATGTGTTTGTATCCACAGTGTTCTTCTCATTTCTTGCCTTTGTAACGTACCTAATTCCTGTGTTGCCCACACAATCATAGAAATAGAAAGGAATTATGGTAATTGGCCGTAAGTGATGAATTAT i colAng1.NW_012111697v1 I 311 C 0 s calJac3.chr22 28620829 635 + 49145316 GAAGTATGTAAAATGAAAAAGGGTTTAATGATTGTGGTTTTTT-TAATTAGGTAAGCATATAGGTCTCACTTGGCCTCCTAGATCTGTCAAAGGAAT-GGGTCAGGCTCTCCTAGAGCCAGAGGCAG-CCGCAGTAGAGGAACTAGGAAGCTGGTGCATCACTGAACAAAGATAGAGTGCTTCTCAGGGCTGCACATGATACTTGCTATGGCCAACTCAGGTGAAGGTTTTCCTTCAGAGGCCACAGAGTCTCCATGGGAACAGCCT-TCC-CCCTTCAGCATTCCTGTAGAGTGGTTCTGTTGTACATCTGAATCTTTACATTGTGGAGCACTTGGGTTGGGATAGATATGATTGCCTTATTTCTCATGAAAT---AACAAAGGAACATTTGGGAATAATTTTTTTACAAGTAGCCATTTGATATTTGTTTCCTCAAAAGTTTATGAGA-TTTTTTTAAAGAGCTGAAGTTATGTTGAACATAGAGCCATAAATAGTGGTTGTTTTATTGACTTTATA---TAAATGTTTGTATCCACAGTGTTCTTCTCATCTCTTGCCTTTGTAACCTGCCTAATTTCTGTGTTGCTGACACAATCATAGAAATACAAAGGAATTATCATAGTTGGCTGTCAGTGACTAAGTAT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5475325 631 + 8899380 GAAGTATGTAAAATGAAAAAGAGTTTAATGATTGTGTTTTTTTAAAATTATGTAAGCGTATAGGTCTCACTTGGCCTCCTAGGTCTGTCAAAGGAATCGGGGCAGGCTCTCCTAGAGCCAGAAGCAC-CCGCAGTAGAGGAACTAGGAAGCTGCTGCATCACTGAACAAAGATAGAGTGCTTCTCAGGGCTGCACATGATACTCGCTATGGCTAACTCAGGTGAAGGTTTTCCTTCAGAGGCCAC--AGTCCCTATGGGAACAGCCTGGCC-CCCTTCAGCATTCCTGTAGAGTGGTTCTGTTGTACATCTGAATCTTTTCATTGTGGAGCACTCCGGTGCGGATAGATGTGATTGCCTTATTTGTCATGAA--------AAAGGAACATTTGGGAACAATTTTTTTATAAGTAGCCATTTGATATTTGTTTCCTGAAAAGTTTATGAGA-TTTTTTTAAAGAGCTGAAATTATGTTGAACATAGAACCATAAATAGTGGTTGTTTTAGCGACTTTATG---TAAATGTTTGTATTCACAGTGTTATTCTCATCTCTTGCCTTTGTAACCTGCCTAGTTTCTGTGTTGCTGACACAATCATAAAAATACAAAAGAACTATCGTAGTTGGCCATAAGTGACGAAGTAT i saiBol1.JH378197 C 0 I 322 s cebCap1.NW_016107633v1 1682726 629 - 2680843 GAAGTATGTAAAATGAAAAAGGGTTTAATGATTGTGGTTTTTT-AAATTAGGTAAGCATATAGGTCTCACTTGGCCTCCTAGATCTGTGAAAGGAATCGGGACAGGCTGTCCTAGAGCCAGAGGCAG-CCGCAGTAGAGGAGCTAGGAAGCTGGTGCATCACTGAACAAAGATAGAGTGCTTCTCAGGGCTGCACATGTTACTCACTATGGCCAACTCAGGTGAAGGTTTTCCTTCAGAGGCCACAGAGTCTCCATGGGAACAGCCT-GCC-CCCTTCAGCATTCCTGTAGAGTGGTTTTGTTGTACATCTGAATCTTTACATTGTGGAGCACTCAGGTGGGGATAGATATGATTGCCTTATTTGTCATGAA--------AAAGGAACATTTGGGAACAATTTTTTTGTAAGTAGCCATTTGATATTTGTTTGCTGAAAAGTTTATGAGA-TTTTTTTAACAAGCTGAAATTATGTTGAACATACAGCCATAAATAGTGGTCGTTTTATTGACTTTATG---TAAATGTTTGTAGT--CAGTGTTCTTCTCATCTCTTGCCTTTGTAACCTGCCTAATTTCTGTGTTGCTGACACAATCATAGAAATACAAAGGAATTATCGTAGTTGGCCATAAGTGACGAAGTAT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 424323 625 - 4471408 GAAGTATGTAAAATGAAAAAGGGTTTAATGATTGTGGTTTTTT-AAATTAGGTAAGCATATAGGTCTCACTTGGCCTCCTAGATCTGTCAAAGTAATGGGGGCAGGCTCTCCTAGATCCAGAGGCAA-CCGCAGTAGAGGAACTAGGAAGCTGGTGCATCACTGAACAG----AGAGTGCTTCTCAGGGCTGCACATGATACTCGCTATGGCCAACTCAGGTGAAGGTTTTCCTTCAGAGGCCACAGAGTCTCCATGGGAACAGCCT-GCCGCCCTTCATCATTCCTGTAGAGTGGTTCTGTTGTACATCTGAATC--TACATTGTGGAGCACTCGGGTGGGGATAGATATGATTGCCTTATTTGTCATGAA--------AAAGGAACATTTGGAAATAATTTTTTTAAAAGTAGCCATTTGATATTTGTTTCCTGAAAAGTTTATGAGA-TTTTTTTAAAGAGCTGAAATTATGTTGAACATAGAGCCATAAATGGTGGTCATTTTATTGACTTTATG---TAAATGTTTGTATCCACAGTGTTCTTCTCATCTCTTGCCTTTGTAAGCTGCCTAATTTCTATGTTGCTGACACAATCATAGAAATACAAAGGAA-TATCGTAGTTGGCCATAAGTGATGAAGTAT i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I a score=271695.000000 s hg38.chr19_GL383574v1_alt 152945 25 + 155864 GAGTTACATTTAATTATATATTCAA s panTro5.chr19 36220462 25 + 61309027 GAGTTACATTTAATTATATATTCAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39964679 25 + 64411610 GAGTTACATTTAATTATATATTCAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6375920 25 - 8369475 GAGTTACATTTAATTATATATTCAA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63974242 25 - 106955855 GAGTTACATTTAATTATATATTCAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30289446 25 + 53671032 GAGTTACATTTAATTATATATTCAA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34743612 25 + 59248254 GAGTTACATTTAATTATATATTCAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4619105 25 - 13342542 GAGTTACATTTAATTATATATTCAA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5540859 25 + 7714307 GAGTTACATTTGATTATATATTCAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29343583 25 + 50890351 GAGTTACATTTAATTATATATTCAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 976253 25 - 2385121 GAGTTACATTTAATTATATATTCAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2418559 25 + 4274983 GAGTTACATTTAATTATATATTCAA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28621464 25 + 49145316 GAGTTACGTTTAATTATATATTCAA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5476278 25 + 8899380 GAGTTACATTTAATTATATATTCAA i saiBol1.JH378197 I 322 C 0 s cebCap1.NW_016107633v1 1683355 25 - 2680843 GAGTTATATTTAATTATATATTCAA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 424948 25 - 4471408 GAGTTACATTTAATTATATATTCAA i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4666666 4670 - 122678785 I a score=120968.000000 s hg38.chr19_GL383574v1_alt 152970 11 + 155864 AAAAGGAAAAT- s panTro5.chr19 36220487 11 + 61309027 AAAAGGAAAAT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39964704 11 + 64411610 AAAAGGAAAAT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6375945 11 - 8369475 AAAAGGAAAAT- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63974267 11 - 106955855 AAAAGGAAAAT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30289471 11 + 53671032 AAAAGGAAAAT- i rheMac8.chr19 C 0 I 8 s macFas5.chr19 34743637 11 + 59248254 AAAAGGAAAAT- i macFas5.chr19 C 0 I 8 s macNem1.NW_012011689v1 4619130 11 - 13342542 AAAAGGAAAAT- i macNem1.NW_012011689v1 C 0 I 8 s cerAty1.NW_012005268v1 5540884 11 + 7714307 AAAAGGAAAAT- i cerAty1.NW_012005268v1 C 0 I 8 s chlSab2.chr6 29343608 11 + 50890351 AAAAGGAAAAT- i chlSab2.chr6 C 0 I 8 s manLeu1.NW_012102454v1 976278 11 - 2385121 AAAAGGAAAAT- i manLeu1.NW_012102454v1 C 0 I 8 s colAng1.NW_012111697v1 2418584 11 + 4274983 AAAAGGAAAAT- i colAng1.NW_012111697v1 C 0 I 8 s calJac3.chr22 28621489 11 + 49145316 AAAAGGAAAAT- i calJac3.chr22 C 0 I 6 s saiBol1.JH378197 5476303 11 + 8899380 AAAAGGAAAAT- i saiBol1.JH378197 C 0 I 310 s cebCap1.NW_016107633v1 1683380 11 - 2680843 AAAAGGAAAAT- i cebCap1.NW_016107633v1 C 0 I 8 s aotNan1.NW_018505377v1 424973 11 - 4471408 AAAAGGAAAAT- i aotNan1.NW_018505377v1 C 0 I 8 s canFam3.chr1 4671336 11 - 122678785 -AATGGAAAGAA i canFam3.chr1 I 4670 C 0 e proCoq1.NW_012149263v1 619443 5601 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I a score=487482.000000 s hg38.chr19_GL383574v1_alt 152981 36 + 155864 AGAAAACCTGGTTATCAATAAGTAGACGAAACTATA s panTro5.chr19 36220498 36 + 61309027 AGAAAACCTGGTTATCAATAAGTAGACCAAACTATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39964715 36 + 64411610 AGAAAACCTGGTTATCAATAAGTAGACCAAACTATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6375956 36 - 8369475 AGAAAACCTGGTTGTCAATAAGTAGACCAAACTATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63974278 36 - 106955855 AGAAAACCTGTTTATCAATAAATAGACCAAACTATA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30289490 36 + 53671032 AGAAAACCTGGTTATCAATAAGTAGACCAAACTATA i rheMac8.chr19 I 8 C 0 s macFas5.chr19 34743656 36 + 59248254 AGAAAACCTGGTTATCAATAAGTAGACCAAACTATA i macFas5.chr19 I 8 C 0 s macNem1.NW_012011689v1 4619149 36 - 13342542 AGAAAACCTGGTTATCAATAAGTAGACCAAACTATA i macNem1.NW_012011689v1 I 8 C 0 s cerAty1.NW_012005268v1 5540903 36 + 7714307 AGAAAACCTGGTTATCAATAAGTAGACCAAACTATA i cerAty1.NW_012005268v1 I 8 C 0 s chlSab2.chr6 29343627 36 + 50890351 AGAAAACCTGGTTATCAATAAGTAGACCAAACTATA i chlSab2.chr6 I 8 C 0 s manLeu1.NW_012102454v1 976297 36 - 2385121 AGAAAACCTGGTTATCAATAAGTAGACCAAACTATA i manLeu1.NW_012102454v1 I 8 C 0 s colAng1.NW_012111697v1 2418603 36 + 4274983 AGAAAACCTGGTTATCAATAAGTAGACCAAACTATA i colAng1.NW_012111697v1 I 8 C 0 s calJac3.chr22 28621506 36 + 49145316 AGAAAACCTGGTTATCAATAAGTAGACCAAACTATA i calJac3.chr22 I 6 C 0 s saiBol1.JH378197 5476624 36 + 8899380 agaaaaCCTGGTTATCAGTAAGTAGACCAAACTATA i saiBol1.JH378197 I 310 C 0 s cebCap1.NW_016107633v1 1683399 36 - 2680843 AGAAAACCTGGTTATCAATAAGTAGACCAAACTATA i cebCap1.NW_016107633v1 I 8 C 0 s aotNan1.NW_018505377v1 424992 36 - 4471408 AGAAAACCTGGTTATCAATAAGTAGACCAAACTGTA i aotNan1.NW_018505377v1 I 8 C 0 s proCoq1.NW_012149263v1 625044 36 + 2501019 AGAAAACCTGGGTGTCAATAAGTAGACCAAACTCTA i proCoq1.NW_012149263v1 I 5601 C 0 s canFam3.chr1 4671347 36 - 122678785 AGAAAACCTAGTTATCAATAAGTAGGCCAAACTATA i canFam3.chr1 C 0 I 20 e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I a score=222875.000000 s hg38.chr19_GL383574v1_alt 153017 20 + 155864 TACCACCATTACATAGGTTG s panTro5.chr19 36220534 20 + 61309027 TACCACCATTACATAGGTTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39964751 20 + 64411610 TACCACCATTACATAGGTTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6375992 20 - 8369475 TACCACCATTACGTAGGTTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63974314 20 - 106955855 TACCACCATTACATAGGTTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30289526 20 + 53671032 TACCACCATTACTTAGGTTG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34743692 20 + 59248254 TACCACCATTACTTAGGTTG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4619185 20 - 13342542 TACCACCATTACTTAGGTTG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5540939 20 + 7714307 TACCACCATTACTTAGGTTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29343663 20 + 50890351 TACCACCGTTACTTAGGTTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 976333 20 - 2385121 TACCACCATTACTTAGGTTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2418639 20 + 4274983 TACCACCATTACTTAGGTTC i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28621542 20 + 49145316 TACCACCATTACATAGGTTG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5476660 20 + 8899380 TACCACCATTACATAGGTTG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1683435 20 - 2680843 TACTACCATTACATAGGTTG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 425028 20 - 4471408 TACCACCATTACATAGGTTG i aotNan1.NW_018505377v1 C 0 C 0 s proCoq1.NW_012149263v1 625080 20 + 2501019 TACAGACATTATATAGGTTG i proCoq1.NW_012149263v1 C 0 I 249 e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4671383 20 - 122678785 I a score=5709210.000000 s hg38.chr19_GL383574v1_alt 153037 602 + 155864 CAGTTGAATATGTggtcaagcacggtggctcatgcctgtaatctcagcattttgggctgaggcgggaggatcacttgagctcaggagtttgagaccagcctgggcaacatggcgaaacctcgtctctac-aaaaaatacaaaaattaaccaagcatggtggtacatctgtagtcccagctgctccggagactgaggcaggaggattgcttgggcctaggagttcgaggctgtagtaagccaaggtcatg-ccactgcactctag-cctgggtaacacagtgagactctgtctcaa--aaaaaaaaaa---------------------aaGTTggccaggcgcagtggctcaggcctgtaatcccagcactttgggaggccgagacgggtggatcacctgaggtcaggagttcgagaccagcctggccagcatggtgaaaccccatctctactaaaagtacaaaaattagccaggcatggtgggcgcttgtaatcccagctactcaggaggctgaggcaggagaatcactggaacctgggaggcggaggttgtggtgagctgagaccacgccactgcactccagcctgggcaac--agcaagactccatctcaaaa---aaaaTAATAATAA--------T s panTro5.chr19 36220554 606 + 61309027 TAGTTGAATATGTggtcaagcacggtggctcatgcctgtaatctcagcattttggcctgaggcgggaggatcacttgagctcaggagtttgagaccagcctgggcaacatggcgaaacctcgtctctac-aaaaaatacaaaaattaaccaagcatggtggtacatctgtagtcccagctgctccggagactgaggcaggaggattgcttgggcctaggagttcgaggctgtagtaagccaaggtcatg-ccactgcactctag-cctgggtaacagagtgagactctgtctcaa--aaaaaaaaaa-----------------------GTTggccaggcgcagtggctcacgcctataatcccagcactttgggaggccgagacgggtggatcacctgaggtcaggagttcgagaccagcctggccagcatggtgaaaccccacctctactaaaaatacaaaaattagccaggcatggtgggcgcttgtaatcccagctactcaggaggctgaggcaggagaatcactggaacctgggaggcggaggttgtgatgagctgagaccacgccactgcactccagcctgggcaac--agcaagactccatctcaaaa---aaaaataaaataa--ataaaaT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39964771 605 + 64411610 TAGTTGAATATGTggtcaagcacggtggctcatgcctgtaatctcagcattttgggctgaggcgggaggatcacttgagctcaggagtttgagaccagcctcggcaacatggcgaaacctcatctctac-aaaaaatacaaaaattaaccaagcatggtggtacatctgtagtcccagctgctccggagactgaggcaggaggattgcttgggcctaggagttcgaggctgtagtaagccaaggtcatg-ccactgcactctag-cctgggtaacagagtgagactctgtctcaa--aaaaaaaaaa-----------------------GTTggccaggcgcagtggctcacgcctataatcccagcactttgggaggccgagacgggtggatcacctgaggtcaggagttcgagaccagcctggccagcatggtgaaaccccatctctactaaaaatacaaaaattagccaggcatggtgggcgtttgtaatcccagctactcaggaggctgaggcaggagaatcactggaacctgggaggtggaggttgtgatgagctgagaccacgccactgcactccagcctgggcaac--agcaagactccatctcaaaa---aaa--taaaataa-aataaaaT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6376012 606 - 8369475 TAGTTGAATATGTggtcaagcacggtggctcatgcctgtaatctcagcattttgggctgaggcgggaggatcacttgagctcaggagtttgagaccagcctgggcaacatggcgaaacctcgtctctac-aaaaaatacaaaaattaaccaagcatggtggtacatctgtagtcccagctgctccggagactgaggcaggaggattgcttgggcctaggagttcgaggctgtagtaagccaaggtcatg-ccactgcactctag-cctgggtaacagagtgagactctgtctcaa--aaaaaaaaaa----------------------aGTTggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggccgagacgggtggatcacctgaggtcaggagttcgagaccagcctggccagcatggtgaaaccccatctctactaaaaatacaaaaattagccaggcatggtgggcacttgtaatcccagctactcaggaggctgaggcaggagaatcactggaacgtgggaggcggaggttgtggtgagctgagacaacgccactgcactgcagcctgggcaac--agcaagactccatctcaaaa---aaa--aaaaataa-aataaaaT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63974334 613 - 106955855 TAGTTGAATATGTggtcaagcacggtggctcatgcctgtaatctcagcattttgggctgaggcgggaggatcacttgagctcaggagtttgcaaccagcctgggcaacatggcgaaacctcgtctctac-aaaaaatacaaaaattaaccaagcagggtggtacgtctgtagtcccagctactccggagactgaggcaggaggattgcttgggcctaggagttcgaggctgcattaagccaaggtcatg-ccactgcactccag-cctgagtaacagagtgagactatgtctcaa--aaaaaaaaaaaa-------------aa-aaaaaGTTggccaggcacagtggctcacgcctgtaatcccagcactttgggaggctgagatgggtggatcagctgaggtcaggagttcgagaccagcctggccagcatggcgaaaccccatctctactaaaaatacaaaaattagccagtcatggtgggtgcttgtaatccaagctactcaggaggctgaggcaggagaatcactggaacctgggaggcggaggttgtggtgagccgagaccacgccactgcactccagcctgggcaac--agcaagactccatctcaaaa---aaa-taataataa---taaaaT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30289546 632 + 53671032 TAGTTGAATATGTggtcaagcacggtggctcatgcctgtaatctcagcattttgggctgaggcaggaggatcacctgagctcaggagtttgagaccagcctgggcaacatggcgaaacctcgtctctac-aaaaaatacaaaaattaaccaagcatggtggtatgtctgtagtcccagctactctggcgactgaggcaggaggattgcttgggcctaggagttcgaggctgtagtaggtcaaggtcatg-ccactgcactctag-cctgggtaacagagtgagactctgtctcaa--aaaaaaaaaaaaaaaaaaaaacaaaaaaaaaCAGTTggccaggcgcagtggctcatgcctataatcccagcactttgggaggctgagatgggtggatcacctgaggtcaggagttcgagaccagcctggccagcatggcgaaaccctgtctctactaaaaatacaaaaattagccaggcatggtgggtgcttgtactcccagctactcaggaggctgaggcaggagaatcactgaaacctgggaggtggaggttgcggtgagctgagaccacgccactgcactccagcctgggcaac--agcaagactccatctaaaataataat--aataataataataaaaT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34743712 632 + 59248254 TAGTTGAATATGTggtcaagcacggtggctcatgcctgtaatctcagcattttgggctgaggcaggaggatcacctgagctcaggagtttgagaccagcctgggcaacatggcgaaacctcgtctctac-aaaaaatacaaaaattaaccaagcatggtggtatgtctgtagtcccagctactctggcgactgaggcaggaggattgcttgggcctaggagttcgaggctgtagtaggtcaaggtcatg-ccactgcactctag-cctgggtaacagagtgagactctgtctcaa--aaaaaaaaaaaaaaaaaccaacaaaaaaaaACAGTTggccaggcgcagtggctcatgcctataatcccagcactttgggaggctgagatgggtggatcacctgaggtcaggagttcgagaccagcctggccagcatggcgaaaccctgtctctactaaaaatacaaaaattagccaggcatggtgggtgcttgtactcccagctactcaggaggctgaggcaggagaatcactgaaacctgggaggtggaggttgtggtgagctgagaccacgccactgcactccagcctgggcaac--agcaagactccatctaaaaaaataat--aataataataataaaat i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4619205 622 - 13342542 TAGTTGAATATGTggtcaagcacggtggctcatgcctgtaatctcagcattttgggctgaggcaggaggatcacctgagctcaggagtttgagaccagcctgggcaacatggcgaaacctcgtctctac-aaaaaatacaaaaattaaccaagcatggtggtatctctgtagtcccagctactctggcgactgaggcaggaggattgcttgggcctaggagttcgaggctgtagtaggtcaaggtcatg-ccactgcactctag-cctgggtaacagagtgagactctgtctcaa--aacaaaaacaaa-------aacaaaaacaaaCAGTTggccaggcgcagtggctcatgcctataatcccagcactttgggaggctgagatgggtggatcacctgaggtcaggagttcgagaccagcctggccagcatggcgaaaccctgtctctactaaaaatacaaaaattagccaggcatggtgggtgcttgtactcccagctactcaggaggctgaggcaggagaatcactgaaacctgggaggtggaggttgcagtgagctgagaccacgccactgcactccagcctgggcaac--agcaagactccatctaaaaa---aat--aataataataataaaaT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5540959 625 + 7714307 TAGTTGAATATGTggtcaagcacggtggctcatgcctgtaatctcagcattttgggctgaggcaggaggatcacctgagctcaggagtttgagaccagccggggcaacatggcgaaacctcgtctctacaaaaaaatacaaaaattaaccaagcatggtggtatgtctgtagtcccaggtactctggcgactgaggcaggaggattgcttgggcctaggagttcgaggctgtagtaggtcaaggtcatg-ccactgcactctag-cctgggtaacagagtgaga--ctgtctcaa--aaaacaacaaca--acaacaacaacaa-aaaCAGTTggtcaggcgcagtggctcatgcctataatcccagcactttgggaagctgagatgggtggatcacctgaggtcaggagttcgagaccagcctggccagcatggcgaaaccctgtctctactaaaaatacaaaaattagccaggcatggtgggtgcttgtactcccagctactcaggaggctgaggcaggagaatcactggaacctgggagctggaggttgcggtgagctgagactacgccactgcactccagcctgggcaac--agcaagactctatctcaaaa---aat--aataataataataaaaT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29343683 610 + 50890351 TAGTTGAATATGTggtcaagcacggtggctcatgcctgtaatctcagcattttgggctgaggcaggaggatcacctgagctcaggagttggagaccagcctgggcaacatggcgaaacctcgtctttac-aaaaaatacaaaaattaaccaagcatggtggtacgtctgtagtcccagctactctggcgactgaggcaggaggattgcttgggcctaggagttcgaggctgtagtaggtcaaggtcatg-ccactgcactctag-cctgggtaacagagtgagactctgtctcaa--aaaaaaaaaa------------aaaaa-aaCCAGTTggccaggcgcagtggctcatgcctataatcccagcactttgggaggctgagatgggtggatcacctgaggtcaggagttcgagaccagcctggccagcatggcgaaaccctgtctttactaaaaatacaaaaattagccaggcatggtgggtgcttgtactcccagctactcaggaggctgaggcaggagaatcactggaacctgggaggtggaggttgcggtgagccgagaccacgcctctgcactccagcctgggcaac--agcaagactccatctcaaaa-----------aataataataaaaT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 976353 623 - 2385121 TAGTTGAATATGTggtcaagcacggtggctcatgcctgtaatctcagcattttgggctgaggcaggaggatcacctaagctcaggagtttgagaccagcctgggcaacatggcgaaacctcatctctac-aaaaaatacaaaaactaaccaagcatggtggtatgtctgtagtcccagctactctggcgactgaggcaggaggattgcttgggcctaggagttcgaggctgtagtaggtcaaggtcatg-ccgctgcactctag-cctgggtaacagagtgaga--ctgtctcaa--aaaaaaaaaaaa---aaacaacaaaaa-aaaCAGTTggccaggcgcagtggctcatgcctataatcccagcactttgggaagctgagatgggtggatcacctgaggtcaagagttcgagaccagcctggccagcatggcgaaaccctgtctctactaaaaatacaaaaattagccaggcatggtgggtgcttgtactcccagctactcaggaggctgaggcaggagaatcactggaacctgggaggtggaggttgcggtgagctgagactacgccactgcactccagcctgggcaac--agcaagactccatctcaaaa---aat--aataataataataaaaT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2418659 605 + 4274983 TAGTTGAATATGTggtcaagcacggtggctcatgcctgtaatatcagcattttgggctgaggcaggaggatcacctgagctcaggagtttgagaccagcctgggcaacatggcgaaacctcgtctctac-aaaaaatacaaaaattaaccaagcatggtggtacgtctgtactcccaactactctggcaactgaggcaggaggattgcttaggcctaggagttcgaggctgtagtaggtcaaggttgtg-ccactgcactgtag-cctgggtaacagagtgagactctgtctcaa--aaaa------------------------aaaaaGGTggctgggcacagtggctcatgcctataatcccagcactttgggaggctgagatgggtggatcacctgaggtcaggagttcgagaccagcctggccagcatggtgaaacaccgtttctactaaaaatacaaaaattagccaggcatggtgggtgcttgtactcccagctactcaggaggctgaggcaggagaatcactggaacttgggaggcggaggttgcgttgagccgagaccacgccactgcactccagcctgggcaac--agcaagactccatctcaaaa---aat--aataataataataaaaT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28621562 585 + 49145316 AAGTTGAAGATCGggtcaagcatggtggctccttcctgtaatctcagcattttgggctgaggtgggaagat--------ctcaggaatttgagaccagcctgggcaacatggcaaaacctcgtctctaccaaaaaatataaaaat----taaacatagtggtatgtctgtagtcccagctactccggagactgaagcagaaggattgtttggacccaggcattagaggctgcagtgagccaaggtcatgcccactgcattccag-cctgggtaacagagggagactctgtctctc--aaaaaaaaaa------------------aaaaaGTTggccaggcacagtggctcacacctgcaataccagcactttggga----------ggtggatcacctgaggtcaggagttcaagaccagcctagccagcatggcaaaaccccatctttactaaaaatac-aaaattggttgggcatggtgggtgcttgtaatgccagctactcaggaggctgaggcaggagaattgctggaacctgggaggtggaggttatggtgagccgagaccatgccactgcacttcagcctggatgacagagcaagactccatctcaaaa---aga-------taa--ataaaaT i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5476680 598 + 8899380 AAGTTGAAGATTGggtcaagcatggtagctcatgcctgtaatctcagcattttgggctgaggtgggaggatcactt--gctcaggagtttgagaccagcctgggcaacatggtgaaacctcgtctctaccaaaaaatacaaaaattaactaagcatagtggtatgtctgtagtcccagctactctggagactgaggcagaaggattgtttggatccaggctttcgaggctgcagtgagccaaggtcatg-ccactgcattccagccctgggtaacagagagagtctctgtctctcaaaaaaaaaaaa------------------aaaaaGTTggccaggcgcagtggcccatgcctgcaatcccagcattttggga----------ggtggattacctgaggtcaggagttcaagaccagcttggccagcatggcgaaaccccatctttactaaaaatacaaaaattggccaggcatggtgggtgcttgtaatgccagctactcaggaggctgaggcaggagaattgctggaacctgggaggtggaggttgtggtgagccgagaccatgccactgcactccagcctgggtgacagagcaagacttcatctcaaaa---aga-------taa--aTAGAAT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1683455 583 - 2680843 AAGTTGAAGATTGggtcaagcatagtggctcatgcctgtaatctcaacattttgggctgaggtgggaggatcattt--gctcaggagtttgagaccagcctgggcaacatggtgaaacctcgtctctaccaaaaaatacaaaaat----taagcatagcgatatgtctgtagtcccagctactctggagactgaggcagaaggattgtttggacccaggcattcgaggc-----tgagccaaagtcatg-ccactgcattccag-cctgggtaacagagggagtctctgtctctc----aaaaaaaa------------------aaaaaGTTggccagg-gcagtggctcacgcctgcaatcccagcactttggga----------ggtggatcacctgaggtcaggagatcaagactagcctggccagcgtggcgaaaccctatctttactaaaaatacaaaaattggccgggcatggtgggtgcttgtaatgccagctaatcaggaggctgaggcaggagaattgctggaacctgggagatggaggttgtggtgagccgagaccatgccactgcactccagcctgggtaacagagcaagactccatctcaaaa---aga-------taa--ataaaaT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 425048 594 - 4471408 AAGTTGAAGATTGggtcaagcatggtggctcatgcctgtaatctcagcattttgggctgagatgggaggatcactt--gctcaggagtttgagaccagcctgggcaacatggcgaaacctcgtctttaccaaaaaatataaaaattaattaagcgtagtgatatgtctgtagccccagctactctggagactgaggcagaaggattgtctggatccaggcattcgaggctgcagtgagtcaaggtcatg-ccactgcattccag-cctgggtaagagagggagactctgtctctc---aaaaaaaaa------------------aaaaaGTTggccaggcgcagtggctcacgcctgcaatcccagcactttggga----------ggcggatcacctgaggtcaggagttcaagaccagcctggccagcatggcaaaaccccatctttactaaaaatacaaaaattggccgggcatggtgggtgcttgtaatgccagctactcaggaggctgaggcaggagaatcgctggaacctgggaggtggaggttgtggtgagccgagaccatgccactgcactccagcctaggtgacagagcaagactccatctcaaaa---aga-------taa--ataaaat i aotNan1.NW_018505377v1 C 0 C 0 e proCoq1.NW_012149263v1 625100 249 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e canFam3.chr1 4671383 20 - 122678785 I a score=430804.000000 s hg38.chr19_GL383574v1_alt 153639 43 + 155864 AAGTTAAATATGTGGTAAATGTGACTTTCAGTGAAACGTATTT s panTro5.chr19 36221160 43 + 61309027 AAGTTAAATATATGGTAAATGTGACTTTCAGTGAAATGTATTT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39965376 43 + 64411610 AAGTTAAATATATGGTAAATGTGACTTTCAGTGAAATGTATTT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6376618 43 - 8369475 AAGTTAAATATGTGGTAAATGTGACTTTCAGTGAAATGTATTT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63974947 43 - 106955855 AAGTTAAATATGTGGTAAATGTGACTTTCAGTGAAATTTATTT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30290178 43 + 53671032 AAGTTAAATATGTGGTAAATGTGACTTTCAGTGAAATGTATTT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34744344 43 + 59248254 aaGTTAAATATGTGGTAAATGTGACTTTCAGTGAAATGTATTT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4619827 43 - 13342542 AAGTTAAATATGTGGTAAATGTGACTTTCAGTGAAATGTATTT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5541584 43 + 7714307 AAGTTAAATATGTGGTAAATGTGACTTTCAGTGAAATGTATTT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29344293 43 + 50890351 AAGTTAAATATGTGGTAAATGTGACTTTCAGTGAAATGTATTT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 976976 43 - 2385121 AAGTTAAATATGTGGTAAATGTGACTTTCAGTGAAATGTATTT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2419264 43 + 4274983 AAGTTAAATATGCGGTAAATGTGACTTTTAGTGAAATGTATTT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28622147 42 + 49145316 AACTTAAATGTGTAGTAAATGTGACTTTCAGTAAACTTTTGT- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5477278 43 + 8899380 AACTTAAATATGTAGTAAATGTGACTTTCAGTGAAATGTATTT i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1684038 43 - 2680843 AACTTCAATATATAGTAAATGTGACTTTCAGTGAAATGTATTT i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 425642 38 - 4471408 a-----aaTATGTAGTAAATGTGATTTTCAGTGAAATGTATTT i aotNan1.NW_018505377v1 C 0 I 21 s canFam3.chr1 4671403 43 - 122678785 AAGTTTAATTTAGAACAAATATAACACTCAGTAAAATAGAACT i canFam3.chr1 I 20 C 0 e proCoq1.NW_012149263v1 625100 249 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I a score=66247.000000 s hg38.chr19_GL383574v1_alt 153682 10 + 155864 GAACTTTTGT----- s panTro5.chr19 36221203 10 + 61309027 GAACTTGTGT----- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39965419 10 + 64411610 GAACTTGTGT----- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6376661 10 - 8369475 GAACTTTTGT----- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63974990 10 - 106955855 GAACTTTTGT----- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30290221 10 + 53671032 GAACTTTTGT----- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34744387 10 + 59248254 GAACTTTTGT----- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4619870 10 - 13342542 GAACTTTTGT----- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5541627 10 + 7714307 GAACTTTTGT----- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29344336 10 + 50890351 GAACTTTTGA----- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 977019 10 - 2385121 GAACTTTTGT----- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2419307 10 + 4274983 TAACTTTTGT----- i colAng1.NW_012111697v1 C 0 C 0 s saiBol1.JH378197 5477321 10 + 8899380 AAACTTTTGT----- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1684081 10 - 2680843 AAACTTTTGT----- i cebCap1.NW_016107633v1 C 0 C 0 s canFam3.chr1 4671446 10 - 122678785 -----CTTGTTATGT i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 625100 249 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 425680 21 - 4471408 I e calJac3.chr22 28622189 0 + 49145316 C a score=1370880.000000 s hg38.chr19_GL383574v1_alt 153692 211 + 155864 TTGGGAGAGCAGATGGTTTCAAGCAAATGTTATTCCTGATTTTAGCTTTATGAGAAGAGTCACAGTATTCCGCTGTTGTAGGTATCAGAAACTACAACCAGCGATATCCAGATTCTGCTATTTGAACCTATCCAGAGTCAGGGGTTCTA-AGAAGCCACCCAAGGTGTGAAA--CTGGTATACCTTGCCAGGCTCCCGCTCTGCACACCCAGAG s panTro5.chr19 36221213 211 + 61309027 TTGGGAGAGCAGATGGTTTCAAGCAAATGTTATTTCTGATTTTAGCTTTATGAGAAGAATCACAGTATTCCGCTGTTGTAGGTATCAGAAACTACAACCAGCGATATCCAGATTCTGCTATTTGAACCTATCCAGAGTCAGGGGTTCTA-AGAAGCCACCCAAGGTGTGAAA--CTGGTATACCTTGCCAGGCTCCCGCTCTGCACACCCAAAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39965429 211 + 64411610 TTGGGAGAGCAGATGGTTTCAAGCAAATGTTATTTCTGATTTTAGCTTTATGAGAAGAATCACAGTATTCCGCTGTTGTAGGTATCAGAAACTACAACCAGCAATATCCAGATTCTGCTATTTGAACCTATCCAGAGTCAGGGGTTCTA-AGAAGCCACCCAAGGTGTGAAA--CTGGTATACCTTGCCAGGCTCCCGCTCTGCACACCCAAAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6376671 211 - 8369475 TTGGGAGAGCAGATGGTTTCAAGCAAATGTTATTCCTGATTTTAGCTTTATGAGAAGAATCACAGTATTCCACTGTTGTAGGTATCAGAAACTACAACCAGCGATATCCAGATTCTGCTATTTGAACCTATCCAGAGTCAGGGGTTCTA-GGAAGCCACCCAAGGTGTGAAA--CTGGTATACCTTGCCAGGCTCCCGCTCTGCACACCCAAAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63975000 211 - 106955855 TTGGGAGAGCAGATGGTTTCAAGCAAGTGTTATTCCTGATTTTAGCTTTATGAGAAGAATCACAGTATTCCGCTGTTGTAGGTATCAGAAACTACAACCAGCGATATCCAGATTCTGCTATTTGAACCTACCCAGAGTCAGGGGTTCTA-AGAAGCCACCCAAGGTGTGAAA--CTGGTATACCTTGCCAGGCTCCCGCTCTGCACACCCAAAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30290231 211 + 53671032 TTGGGAGAGCAGATGGTTTCAAGCAAGCATTATTCCTGATTTTAGCTTTTTGAGAAGAATCACAGTATTCCACTGTTGTAAGTATCAGAAACTATAATCAGCGATGTCCAGATTCTGCTCTTTGAACCTACCCAGAGTCAGGGGTTCTA-AGAAGCCACCCAAGGTGTGAAA--CTGGTATAGCTTGCCAGGCTCCCGCTCTGCACACCCAAAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34744397 211 + 59248254 TTGGGAGAGCAGATGGTTTCAAGCAAGCATTATTCCTGATTTTAGCTTTTTGAGAAGAATCACAGTATTCCACTGTTGTAAGTATCAGAAACTATAATCAGCGATGTCCAGATTCTGCTCTTTGAACCTACCCAGAGTCAGGGGTTCTA-AGAAGCCACCCAAGGTGTGAAA--CTGGTATAGCTTGCCAGGCTCCCGCTCTGCACACCCAAAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4619880 211 - 13342542 TTGGGAGAGCAGATGGTTTCAAGCAAGCATTATTCCTGATTTTAGCTTTTTGAGAAGAATCACAGTATTCCACTGTTGTAAGTATCAGAAACTATAATCAGCGATGTCCAGATTCTTCTCTTTGAACCTACCCAGAGTCAGGGGTTCTA-AGAAGCCACCCAAGGTGTGAAA--CTGGTATAGCTTGCCAGGCTCCCGCTCTGCACACCCAAAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5541637 211 + 7714307 TTGGGAGAGCAGATGGTTTCAAGCAAGCATTATTCCTGATTTTAGCTTTTTGAGAAGAATCACAGTATTCCACTGTTGTAAGTATCAGAAACTATAATCAGCGATGTCCAGATTCTGCTCTTTGAACCTACCCAGAGTCAGGGGTTCTA-AGAAGCCACCCAAGGTGTGAAA--CTGGTATAGCTTGCCAGGCTCCCACTCTGCACACCCAAAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29344346 211 + 50890351 TTGGGAGAGCAGATGGTTTCAAGCAAGCATTATTCCTGATTTTAGCTTTTTGAGAAGAATCACAGTATTCCACTGTTGTAAGTATCAGAAACTATAATCAGCGATGTCCAGATTCTGCTCTTTGAACCTACCCAGAGTCAGGGGTTCTA-AGAAGCCACCCAAGGTGGGAAA--CTGGTATAGCTTGCCAGGCTCCCGCTCTGCACACCCAAAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 977029 211 - 2385121 TTGGGAGAGCAGATGGTTTCAAGCAAGCATTATTCCTGATTTTAGCTTTTTGAGAAGAATCACAGTATTCCACTGTTGTAAGTATCAGAAACTATAATCAGCGATGTCCAGATTCTGCTCTTTGAACCTACCCAGAGTCAGGGGTTCTA-AGAAGCCACCCAAGGTGTGAAA--CTGGTATAGCTTGCCAGGCTCCCGCTCTGCACACCCAAAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2419317 211 + 4274983 TTGGGAGAGCAGATGGTTTCAAGCAAGCGTTATTCCTGATTTTAGCTTTTTGAGAAGAATCACAGTATTCCACTGTTGTAGGTATCAGAAACTATAATCAGCGATGTCCAGATTCTGCTATTTGAACCTACCCAGAGTCAGGGGTTCTA-AGAAGCCACCCAAGGTGTGAAA--TTGGTATACCTTGCCAGGCTCCCACTCTGCACACCCAAAG i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4671456 212 - 122678785 TTGGGAGAACAAATAG-TTCAGACAAATGTGAACCCCGATGTTAGCTATGTGAGAAGAATCCCACTACTCCACTGTTGAAGGTATCAGAAACTAAAGCCAGAGATATCCAGATGTTGCTATTGGAACCAATCCAGAGCCAGGGGTTCTATAGGAGCTACCCCAGGGGGTAAGACCTAGCACACCCTGCCAAGCTTCT-CTTTGAACATCCAGAG i canFam3.chr1 C 0 C 0 e proCoq1.NW_012149263v1 625100 249 + 2501019 I e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 425680 21 - 4471408 I e cebCap1.NW_016107633v1 1684091 0 - 2680843 C e saiBol1.JH378197 5477331 0 + 8899380 C e calJac3.chr22 28622189 0 + 49145316 C a score=1122016.000000 s hg38.chr19_GL383574v1_alt 153903 163 + 155864 GGAAACTGGTACCGGAGTGAGGATTGGAAGAATCGTGTCTGTAAACCGCCTGCCAGCCACTCCCTTCTCCAGGCTCTGTTTCTGCACCCTGCACTTAAGCCCAGCTTGGTATCC------GAC--TGTCCCGTCCTACTTTGGGACCT--TTGCCGTGGTGGTCCTTTACCTT- s panTro5.chr19 36221424 163 + 61309027 GGAAACTGGTACCGGAGTGAGGACTGGAAGAATCGTGTCTGTAAACCGCCTGCCAGCCACTCCCTTCTCCAGGCTCTGTTTCTGCACCCTGCACTTAAGCCCAGCTTGGTATCC------GAC--TGTCCCGTCCTACTTTGGGACCT--TTGCCGTGGTGGTCCTTTACCTT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39965640 163 + 64411610 GGAAACTGGTACCGGAGTGAGGATTGGAAGAATCGTGTCTGTAAACCGCCTGCCAGCCACTCCCTTCTCCAGGCTCTGTTTCTGCACCCTGCACTTAAGCCCAGCTTGGTATCC------GAC--TGTCCCGTCCTACTTTGGGACCT--TTGCCGTGGTGGTCCTTTACCTT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6376882 163 - 8369475 GGAAACTGGTACCGGAGTGAGGATTGGAAGAATCGTGTCTGTAAACCGCCTGCCAGCCACTCCCTTCTCCAGGCTCTGTTTCTGCaccctgcacttaagcccagcttggtatct------gac--tgtcccgtcctactttgggacct--ttgctgtggtggtcctttacctt- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63975211 163 - 106955855 GGAAACCGGTACCAGCGTGAGGATCGGAAGAATTGTGTCTGTAAACTGCCTGCCAGCCACTCCCTTCTCCAGGCTCTGTTTCTGCACCCTGCACTTAAGACCAGCTTGGTATCC------AAC--TGTCCCTTCCTGCTTTGGGACCT--TTGCCGTGGTGGTCCTTTCCCTT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30290442 163 + 53671032 GGAAACTGGTACCGGAGGGAGGATTGGAAGAATCGTGTCTGTAAACCACCTGGCAGCCACTCCCTTCTCCAGGCTCTGTTTCTGCaccctgcacttaagctcagcttggtatct------gac--tgtcccgtcctgctttgggacct--ttgccgtggtggtcctttccctt- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34744608 163 + 59248254 GGAAACTGGTACCGGAGGGAGGATTGGAAGAATCGTGTCTGTAAACCACCTGGCAGCCACTCCCTTCTCCAGGCTCTGTTTCTGCACCCTGCACTTAAGCTCAGCTTGGTATCT------GAC--TGTCCCGTCCTGCTTTGGGACCT--TTGCCGTGGTGGTCCTTTCCCTT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4620091 163 - 13342542 GGAAACTGGTACCGGAGGGAGGATTGGAAGAATCGTGTCTGTAAACCACCTGGCAGCCACTCCCTTCTCCAGGCTCTGTTTCTGCACCCTGCACTTAAGCTCAGCTTGGTATCT------GAC--TGTCCCGtcctgctttgggacct--ttgccgtggtggtcctttccctc- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5541848 163 + 7714307 GGAAACTGGTACCGGAGGGAGGATTGGAAGAATCGTGTCTGTAAACCACCTGGCAGCCACTCCCTTCTCCAGGCTCTGTTTCTGCACCCTGCACTTAAGCTCAGCTTGGTATCT------GAC--TGTCCCGTCCTGCTTTGGGACCT--TTGCCGTGGTGGTCCTTTCCCTT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29344557 163 + 50890351 GGAAACTGGTACCGGAGGGAGGATTGGAAGAATCGTGTCTGTATACCACCTGGCAGCCACTCCCTTCTCCAGGCTCTGTTTCTGCACCCTGCACTTAAGCTCAGCTTGGTATCT------GAC--TGTCCCGTCCTGCTTTGGGACCT--TTGCCGTGGTGGTCCTTTCCCTT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 977240 163 - 2385121 GGAAACTGGTACCGGAGGGAGGATTGGAAGAATCGTGTCTGTAAACCACCTGGCAGCCACTCCCTTCTCCAGGCTCTGTTTCTGCACCCTGCACTTAAGCTCAGCTTGGTATCT------GAC--TGTCCCGTCCTGCTTTGGGACCT--TTGCCGTGGTGGTCCTTTCCCTT- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2419528 163 + 4274983 GGAAACTGGTACCGGAGGGAGGATTGGAAGAATCGTGTCTGTAAACCACCTGCCAGCCACTCCCTTCTCCAGGCTCTATTTCTGCGCCCTGCACTTAAGCCCAGCTTGGTATCT------GAC--TGTCCCAtcctgctttgggacct--ttgccgtggtagtcctttccctt- i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 625349 164 + 2501019 GGAAACTGGTACCCGGGTGAGGATTAGAAGAATCCTCTCTGTA-----CCTGCCAGTCACCCACCTCTTCAGGCTC--TTTCTGTAGCCTGTACTTTAGCCCAGCCAGgtatcctgagcagaccttgtgcagtcctgctttagagcct--ttgctgtggtagtccttgcactt- i proCoq1.NW_012149263v1 I 249 I 1 s canFam3.chr1 4671668 164 - 122678785 GGGAGCTG--------GGTAGGGTGAGAAGAATCCTGTCTACAGACCTCTCTTCAGCCACTCACTACTCCAGGCTCTGTCTGTGCA--CTGCACTTTGGCCCATCTGGGAATCCTGAGTAGACCCCAAGCCATGCTGCTTCCAGGCCTTGTTGTGGTGGTGGTCCCTTGACCTG i canFam3.chr1 C 0 C 0 e micMur3.chr22 4003999 1201 - 30143674 I e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 425680 21 - 4471408 I e cebCap1.NW_016107633v1 1684091 0 - 2680843 C e saiBol1.JH378197 5477331 0 + 8899380 C e calJac3.chr22 28622189 0 + 49145316 C a score=163692.000000 s hg38.chr19_GL383574v1_alt 154066 18 + 155864 GTGAGTCCCAC----CTGTCCC s panTro5.chr19 36221587 18 + 61309027 GTGAGTCCCAC----CTGTCCC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39965803 18 + 64411610 GTGAGTCCCAC----CTGTCCC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6377045 18 - 8369475 gtgagtcccac----ctgtccc i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63975374 18 - 106955855 GTGAGTCCCAC----CTGTCCC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30290605 18 + 53671032 gtgagtcccac----ctgtccc i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34744771 18 + 59248254 GTGAGTCCCAC----CTGTCCC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4620254 18 - 13342542 gtgagtcccac----ctgtccc i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5542011 18 + 7714307 GTGAGTCCCAC----CTGTCCC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29344720 18 + 50890351 GTGAGTCCCAC----CTGTCCC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 977403 18 - 2385121 GTGAGTCCCAC----CTGTCCC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2419691 18 + 4274983 gtgagtcccac----ctgtccc i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 4005200 18 - 30143674 GTGAGCCCCGC----CTGTCCC i micMur3.chr22 I 1201 C 0 s proCoq1.NW_012149263v1 625514 22 + 2501019 gtgagccccgcctgtctgtccc i proCoq1.NW_012149263v1 I 1 C 0 s canFam3.chr1 4671832 18 - 122678785 GTGAGCCCCAC----ATATCCC i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 402751 9590 + 643850 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 425680 21 - 4471408 I e cebCap1.NW_016107633v1 1684091 0 - 2680843 C e saiBol1.JH378197 5477331 0 + 8899380 C e calJac3.chr22 28622189 0 + 49145316 C a score=436949.000000 s hg38.chr19_GL383574v1_alt 154084 47 + 155864 TTTTGCACTTGTC-CAAACCTATCCTACAATCAAGGCCTACCTCAGAA s panTro5.chr19 36221605 47 + 61309027 TTTTGCACTTGTC-CAAACCTATCCTACAATCAAGGCCTACCTCAGAA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39965821 47 + 64411610 TTTTGCACTTGTC-CAAACCTATCCTACAATCAAGGCCTACCTCAGAA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6377063 47 - 8369475 ttttgcacttgtc-caaacctatcctacaatcaaggcctacctcagaa i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63975392 47 - 106955855 TTTTGCACTTGTC-CAAACCTATCCTACAATCAAGGCCTACCTCAGAA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30290623 47 + 53671032 ttttgcacttgtc-caaacctatcctacaatcaaggcctacttcagaa i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34744789 47 + 59248254 TTTTGCACTTGTC-CAAACCTATCCTACAATCAAGGCTTACTTCAGAA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4620272 47 - 13342542 ttttgcacttgtc-caaacctatcctacaatcaaggcctacttcagaa i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5542029 47 + 7714307 TTTTGCACTTGTC-CAAACCTATCCTACAATCAAGGCCTACTTCAGAA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29344738 47 + 50890351 TTTTGCACTTGTC-CAAACCTATCCTACAAGCAAGGCCTACTTCAGAA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 977421 47 - 2385121 TTTTGCACTTGTC-CAAACCTATCCTACAATCAAGGCCTACTTCAGAA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2419709 47 + 4274983 ttttgcacttgtc-caaacctatcctacaatcaaggcctacctcagaa i colAng1.NW_012111697v1 C 0 C 0 s micMur3.chr22 4005218 48 - 30143674 TTTTGTACTTGTTGAAAACCTATCCTACGATCCAGGCCTACCTCAGAA i micMur3.chr22 C 0 I 280 s proCoq1.NW_012149263v1 625536 48 + 2501019 ttttgcacttgtcgaaaacctatcctacgatccaggcctacctcagaa i proCoq1.NW_012149263v1 C 0 C 0 s canFam3.chr1 4671850 47 - 122678785 TTTTGGGCTTGTC-AAAACCTGTCCTACGCTCAAGGTTTAGGTCAAAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 412341 44 + 643850 TCTTACACCTATT-AAAACCT---CTGTAATCAAGGCCTACTTCAGAA i dasNov3.JH563638 I 9590 C 0 e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 425680 21 - 4471408 I e cebCap1.NW_016107633v1 1684091 0 - 2680843 C e saiBol1.JH378197 5477331 0 + 8899380 C e calJac3.chr22 28622189 0 + 49145316 C a score=565590.000000 s hg38.chr19_GL383574v1_alt 154131 80 + 155864 GAATATTTTTTT-C-GTAACAACCTTTTTGATTTCCCTTGCCCTTTGCCCATCTCTGCCTTTGCTGATG-CCCCATAAAGTTT- s panTro5.chr19 36221652 81 + 61309027 GAATATTTTTTTTC-GTAACAACCTTTTTTATTTCCCTTGCCCTTTGCCCATCTCTGCCTTTGCTGATG-CCCCATAAAGTTT- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39965868 81 + 64411610 GAATATTTTTTTTC-GTAACAACCTTTTTGATTTCCCTTGCCCTTTGCCCATCTCTGCCTTTGCTGATG-CCCCATAAAGTTT- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6377110 80 - 8369475 gaatattttttt-c-gtaacaacctttttgatttcccttgccctttgcccatctctgcctttgctgatg-ccccataaagttt- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63975439 80 - 106955855 GAATATTTTTTT-C-ATAACAACCTTCTTGATTTCCCTCGCCCTTTGCCCATCTCTGCCTTTGCTGATG-CCCCATAAAGTTT- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30290670 80 + 53671032 taatattttttt-c-gtaacagacttcttgatttctctcgccctttgcccatctctgtctttgctgatg-ccccataaagttt- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34744836 80 + 59248254 TAATATTTTTTT-C-GTAACAGACTTCTTGATTTCTCTCGCCCTTTGCCCATCTCTGTCTTTGCTGATG-CCCCATAAAGTTT- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4620319 80 - 13342542 taatattttttt-c-gtaacagacttcttgatttctctcgccctttgcccatctctgtctttgctgatg-ccccataaagttt- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5542076 80 + 7714307 TAATATTTTTTT-C-GTAACAGACTTCTTGATTTCTCTCGCCCTTTGCCCATCTCTGTCTTTGCTGATG-CCCCATAAAGTTT- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29344785 80 + 50890351 TAATATTTTTTT-C-ATAACAGACTTCTTGATTTCTCTCGCCCTTTGCCCATCTCTGTCTTTGCTGATG-CCCCATAAAGTTT- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 977468 80 - 2385121 TAATATTTTTTT-C-GTAACAGACTTCTTGATTTCTCTCGCCCTTTGCCCATCTCTGTCTTTGCTGATG-CCCCATAAAGTTT- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2419756 81 + 4274983 taatattttttt-tggtaacagtcttcttgatttctctcgccctttgcccatctctgcctttgctgatg-ccccataaagttt- i colAng1.NW_012111697v1 C 0 C 0 s proCoq1.NW_012149263v1 625584 80 + 2501019 tagttttttttttc-gtaacaa-cttcgtgatttctcttgctctttgctcatctctccctttgctgatc-ccccatGAAGTTT- i proCoq1.NW_012149263v1 C 0 I 562 s canFam3.chr1 4671897 64 - 122678785 GAACATTTCCTT-T-ATTATCGCCTTCCTGATTTCTCCCTCTCTTTTCCAGTCT-----------------CCCTTAAAGTTT- i canFam3.chr1 C 0 I 1 s dasNov3.JH563638 412385 82 + 643850 TAACACTGTCTT-T-ATAAAAACCTTCCAGATTTCTCTTACTCTTTGCCCATCTTTCCCTTTTCAGATACCCCCTTAAAGTTTT i dasNov3.JH563638 C 0 C 0 e micMur3.chr22 4005266 280 - 30143674 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 425680 21 - 4471408 I e cebCap1.NW_016107633v1 1684091 0 - 2680843 C e saiBol1.JH378197 5477331 0 + 8899380 C e calJac3.chr22 28622189 0 + 49145316 C a score=311250.000000 s hg38.chr19_GL383574v1_alt 154211 42 + 155864 ATGAGTGCTGTGTGTGTCAACAGCCCTCACCATAATCTGAGT s panTro5.chr19 36221733 42 + 61309027 ATGAGTGCTGTGTGTGTCAACAACCCTCACCATAATCTGAGT i panTro5.chr19 C 0 C 0 s panPan2.chr19 39965949 42 + 64411610 ATGAGTGCTGTGTGTGTCAACAACCCTCACCATAATCTGAGT i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6377190 42 - 8369475 atGAGTGCTGTGTGTGTCAACAGCCCTCACCATAATCTGAGT i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63975519 42 - 106955855 ATGAGTGCTGTGCTTGTCAACATCCCTCACCGTAATCTGAGT i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30290750 42 + 53671032 atgagtgctgtgcTTGTCAACAGCCCTCACCATAATCTGAGT i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34744916 42 + 59248254 ATGAGTGCTGTGCTTGTCAACAGCCCTCACCATAATCTGAGT i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4620399 42 - 13342542 atGAGTGCTGTGCTTGTCAACAGCCCTCACCATAATCTGAGT i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5542156 42 + 7714307 ATGAGTGCTGTGCTTGTCAACAGCCCTCACCATAATCTGAGT i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29344865 42 + 50890351 ATGAGTGCTGTGCTTGTCAACAGCCCTCACCATAATCTGAGT i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 977548 42 - 2385121 ATGAGTGCTGTGCTTGTCAACAGCCCTCACCATAATCTGAGT i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2419837 42 + 4274983 atGAGTGCTGTGCTTGTCAACAGCCCTCACCATAATCTGAGT i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4671962 42 - 122678785 GGGAGTGCTGTAGTTGTTGACACCCCTCCCCATGATCTGGGT i canFam3.chr1 I 1 C 0 s dasNov3.JH563638 412467 42 + 643850 GTTAGTGTTCTATTTATCAACAGCCCTCACCATAATCTGAGT i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 625664 562 + 2501019 I e micMur3.chr22 4005266 280 - 30143674 I e mm10.chr7 111151645 2982 - 145441459 I e aotNan1.NW_018505377v1 425680 21 - 4471408 I e cebCap1.NW_016107633v1 1684091 0 - 2680843 C e saiBol1.JH378197 5477331 0 + 8899380 C e calJac3.chr22 28622189 0 + 49145316 C a score=537051.000000 s hg38.chr19_GL383574v1_alt 154253 86 + 155864 ACTCATGTGATCCTCCTGAA-GCTTGTGAGCTCTTCAAAGAGGAAAGGAGAAAATGCTGAACG----TGGA------TCCAGG--CCCTGTTC------AACGTG s panTro5.chr19 36221775 86 + 61309027 ACTCATGTGATCCTCCTGAA-GCTTGTGAGCCCTTCAAAGAGGAAAGGAGAAAATGCTGAGCG----TGGA------TCCAGG--CCCTGTTC------AACGTG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39965991 86 + 64411610 ACTCATGTGATCCTCCTGAA-GCTTGTGAGCCCTTCAAAGAGGAAAGGAGAAAATGCTGAGTG----TGGA------TCCAGG--CCCTGTTC------AACGTG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6377232 86 - 8369475 ACTCATGTGATCCTCCTGAA-GCTTGTGAGCTCTTCAAAGAGGAAAGGAGAAAATGCTGAACG----TGGA------TCCAGG--CCCTGTTC------AACGTG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63975561 86 - 106955855 ACTCATGCGATCCTCCTGAA-GCTTGTGAGCTCTTCAAGGAGGAAAGGAGAAAATGCTGAACG----TGGA------TCCAGG--CCCCGTTC------AGCGTG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30290792 88 + 53671032 ACTCAGGCAATCCTCCTGCA-ACTTGTGAGCTCTTCAAGGAGGAAACGAGAAAATGCTGAACG----ATGA------TCCAGGCCCCCCGTTC------AACATG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34744958 88 + 59248254 ACTCAGGCAATCCTCCTGCA-ACTTGTGAGCTCTTCAAGGAGGAAACGAGAAAATGCTGAACG----ATGA------TCCAGGCCCCCCGTTC------AACATG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4620441 88 - 13342542 ACTCAGGCAATCCTCCTGCA-ACTTGTGAGCTCTTCAAGGAGGAAACGAGAAAATGCTGAACG----ATGA------TCCAGGCCCCCCATTC------AACATG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5542198 88 + 7714307 ACTCAGGCAATCCTCCTGCA-ACTTGTGAGCTCTTCAAGGAGGAAACGAGAAAATGCTGAACG----ATGA------TCCAGGCCCCCCGTTT------AACGTG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29344907 88 + 50890351 ACTCAGGCAATCCTCCTGCA-ACTTGTGAGCTCTTCAAGGAGGAAATAAGAAAATGCTGAACG----ATGA------TCCAGGCCCCCCGTTC------AACGTG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 977590 88 - 2385121 ACTCAGGCAATCCTCCTGCA-ACTTGTGAGCTCTTCAAGGAGGAAACGAGAAGATGCTGAACG----ATGA------TCCAGGCCCCCCGTTT------AACGTG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2419879 86 + 4274983 ACTCAGGCAATCCTCCTGCA-ACTTGTGAGCTCTTCAAGGAGGAAACGAGAAAATGCTGAACG----ATGA------TCCAGG--CCCCGTTC------AACATG i colAng1.NW_012111697v1 C 0 C 0 s mm10.chr7 111154627 85 - 145441459 ACTCAT-CAATCCTCTTGTAGGTTTGTGAGCCCTTTGAAGAGGAAACAAAGGAATGCCAAATG----TTGA-------ACAGG--CCCTGTTC------AAAGTG i mm10.chr7 I 2982 I 605 s canFam3.chr1 4672004 86 - 122678785 ACTCTCCTGATCCTCTTGCAGATTTATGAACTCTTTGAGGAAGAATCAAGGGTATGTCAAACA----CAAACACAAGTCCAGG--CCCCATT------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 412509 96 + 643850 GCTCCTCCAGTCATCTGTGG-GTTTGTGAGCCCTTTGAGGGGGAAGCAAGGGAATACTGAACACTCTTTAA------TCCAGA--CTGCGTTCCCTTGTCACTTG i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 625664 562 + 2501019 I e micMur3.chr22 4005266 280 - 30143674 I e aotNan1.NW_018505377v1 425680 21 - 4471408 I e cebCap1.NW_016107633v1 1684091 0 - 2680843 C e saiBol1.JH378197 5477331 0 + 8899380 C e calJac3.chr22 28622189 0 + 49145316 C a score=432407.000000 s hg38.chr19_GL383574v1_alt 154339 68 + 155864 CCAGCCTCAGCTTTGAAGGGGCCAGTCTAGAATCATACTTTTT---TGGTTGCATTG-TTTTTGTATTACTA s panTro5.chr19 36221861 68 + 61309027 CCAGCCTCAGCTTTGAAGGGGCCAGTCTAGAATCATACTTTTT---TGGTTGCATTG-TTTTTGTATTACTA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39966077 68 + 64411610 CCAGCCTCAGCTTTGAAGGGGCCAGTCTAGAATCATACTTTTT---TGGTTGCATTG-TTTTTGTATTACTA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6377318 68 - 8369475 CCAGCCTCAGCTTTGAAGGGGCCAGTCTAGAATCATACTTTTT---TGATTGCATTG-TTTTTGTATTACTA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63975647 68 - 106955855 CCAGCCTCAGCTTTGAAGGGGCCAGTCTAGAATCATACTTTTT---TTGTTGCATTA-TTTTTGTATTACTA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30290880 68 + 53671032 CCAGCCTCAGCTTTGAAGGGGCCAGCCTAGAATCATACTTTTT---TTGTTGCATTA-TTTTTTTATTACTA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34745046 68 + 59248254 CCAGCCTCAGCTTTGAAGGGGCCAGCCTAGAATCATACTTTTT---TTGTTGCATTA-TTTTTTTATTACTA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4620529 69 - 13342542 CCAGCCTCAGCTTTGAAGGGGCCAGCCTAGAATCATACTTTTT---TTGTTGCATTATTTTTTTTATTACTA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5542286 68 + 7714307 CCAGCCTCAGCTTTGAAGGGGCCAGCCTAGAATCATACTTTTT---TTGTTGCATTA-TTTTTTTATTACTA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29344995 68 + 50890351 CCAGCCTCAGCTTTGAAGGGGCCAGCCTAGAATCATACTTTTT---TTGTTGCATTA-TTTTTTTATTACTA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 977678 68 - 2385121 CCAGCCTCAGCTTTGAAGGGGCCAGCCTAGAATCATACTTTTT---TTGTTGCATTA-TTTTTTTATTACTA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2419965 68 + 4274983 CCAGCCTCAGCTTTGAAGGGGCCAGCCTAGAATCATACTTTTT---TTGTTGCATTA-TTTATTTATTACTA i colAng1.NW_012111697v1 C 0 C 0 s canFam3.chr1 4672090 64 - 122678785 --AACCTCAGCTGTGGAGTGGTTGGTGTGGAATCAAACTATTTGCCCTATTGTACTA-TTTGTACAA----- i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 412605 66 + 643850 TTAGCTCTAGTTGTGAAGTGTTGGGTGTGGAATTAAACTTATT---TTGTTGGGTTA-ATTTTGTTTTAC-- i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 625664 562 + 2501019 I e micMur3.chr22 4005266 280 - 30143674 I e mm10.chr7 111154712 605 - 145441459 I e aotNan1.NW_018505377v1 425680 21 - 4471408 I e cebCap1.NW_016107633v1 1684091 0 - 2680843 C e saiBol1.JH378197 5477331 0 + 8899380 C e calJac3.chr22 28622189 0 + 49145316 C a score=277869.000000 s hg38.chr19_GL383574v1_alt 154407 44 + 155864 CTTGAGGAATTTTCTAACAGTCATCATTTCATAGTTCAGTGCTC s panTro5.chr19 36221929 44 + 61309027 CTTGAGGAATTTTCTAACAGTCATCATTTCATAGTTCAGTGCTC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39966145 44 + 64411610 CTTGAGGAATTTTCTAACAGTCATCATTTCATAGTTCAGTGCTC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6377386 44 - 8369475 CTTGAGGAATTTTATAACAGTCATCATTTCATAGTTCAGTGCTC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63975715 44 - 106955855 CTTGAGGAATTTTCTAACAGTCATCAGTTCATAGTTCAGTGCTC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30290948 41 + 53671032 CTTGAGGAATTTTCTGACAGTCAT---TTCATAGTTCAGTGCTC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34745114 41 + 59248254 CTTGAGGAATTTTCTGACAGTCAT---TTCATAGTTCAGTGCTC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4620598 41 - 13342542 CTTGAGGAATTTTCTGACAGTCAT---TTCATAGTTCAGTGCTC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5542354 41 + 7714307 CTTGAGGAATTTTCTGACAGTCAT---TTCATAGTTCATTGCTC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29345063 41 + 50890351 CTTGAGGAATTTTCTGACAGTCAT---TTCATAGTTCAGTGCTC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 977746 41 - 2385121 CTTGAGGAATTTTCTGACAGTCAT---TTCATAGTTCATTGCTC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2420033 41 + 4274983 CTTGAGGAATTTTCTAACAGTCAT---TTCATAGTTCAGTGCTC i colAng1.NW_012111697v1 C 0 C 0 s mm10.chr7 111155317 43 - 145441459 CCCAAGGAGTTTTCTAACATTCCTCCTCTCGTAGCTGGGTTTC- i mm10.chr7 I 605 C 0 s canFam3.chr1 4672154 44 - 122678785 CATGAGGAATTTTCTAGTAGTCGTCATGTTGTAGTTGAACTCTC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 412671 29 + 643850 ---------------AACAGTCATCATTTCGTAGTTCAGGTCTC i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 625664 562 + 2501019 I e micMur3.chr22 4005266 280 - 30143674 I e aotNan1.NW_018505377v1 425680 21 - 4471408 I e cebCap1.NW_016107633v1 1684091 0 - 2680843 C e saiBol1.JH378197 5477331 0 + 8899380 C e calJac3.chr22 28622189 0 + 49145316 C a score=84764.000000 s hg38.chr19_GL383574v1_alt 154451 10 + 155864 ACTATTGTAC s panTro5.chr19 36221973 10 + 61309027 ACTATTGTAC i panTro5.chr19 C 0 C 0 s panPan2.chr19 39966189 10 + 64411610 ACTATTGTAC i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6377430 10 - 8369475 ACTATTGTAC i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63975759 10 - 106955855 ACTATTGTAC i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30290989 10 + 53671032 ACTATTGTAC i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34745155 10 + 59248254 ACTATTGTAC i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4620639 10 - 13342542 ACTATTGTAC i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5542395 10 + 7714307 ACTATTGTAC i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29345104 10 + 50890351 ACTATTGTAC i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 977787 10 - 2385121 ACTATTGTAC i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2420074 10 + 4274983 ACTATTGTAT i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28622189 10 + 49145316 ACTATTATTC i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5477331 10 + 8899380 ACTATTATAC i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1684091 10 - 2680843 ACTATTATAC i cebCap1.NW_016107633v1 C 0 C 0 s mm10.chr7 111155360 8 - 145441459 ACGGCGTT-- i mm10.chr7 C 0 C 0 s canFam3.chr1 4672198 10 - 122678785 AGTGTCGCAC i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 412700 10 + 643850 TCTGTTGAAA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 625664 562 + 2501019 I e micMur3.chr22 4005266 280 - 30143674 I e aotNan1.NW_018505377v1 425680 21 - 4471408 I a score=5320.000000 s hg38.chr19_GL383574v1_alt 154461 1 + 155864 C s panTro5.chr19 36221983 1 + 61309027 C i panTro5.chr19 C 0 C 0 s panPan2.chr19 39966199 1 + 64411610 C i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6377440 1 - 8369475 C i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63975769 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30290999 1 + 53671032 T i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34745165 1 + 59248254 T i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4620649 1 - 13342542 T i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5542405 1 + 7714307 T i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29345114 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 977797 1 - 2385121 T i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2420084 1 + 4274983 C i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28622199 1 + 49145316 C i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5477341 1 + 8899380 T i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1684101 1 - 2680843 T i cebCap1.NW_016107633v1 C 0 C 0 s micMur3.chr22 4005546 1 - 30143674 C i micMur3.chr22 I 280 C 0 s mm10.chr7 111155368 1 - 145441459 C i mm10.chr7 C 0 C 0 s canFam3.chr1 4672208 1 - 122678785 C i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 412710 1 + 643850 C i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 625664 562 + 2501019 I e aotNan1.NW_018505377v1 425680 21 - 4471408 I a score=233227.000000 s hg38.chr19_GL383574v1_alt 154462 18 + 155864 TGCTCCTCT-AAGGTTATA s panTro5.chr19 36221984 18 + 61309027 TGCTCCTCT-AAGGTTATA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39966200 18 + 64411610 TGCTCCTCT-AAGGTTATA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6377441 18 - 8369475 TGCTCCTCT-AAGTTTATA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63975770 18 - 106955855 TGCTCTTCT-AAGGTTATA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30291000 18 + 53671032 TGCTCCTGT-AAGGTTATA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34745166 18 + 59248254 TGCTCCTGT-AAGGTTATA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4620650 18 - 13342542 TGCTCCTGT-AAGGTTATA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5542406 18 + 7714307 TGCTCCTGT-AAGGTTATA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29345115 18 + 50890351 TGCTCCTGT-AAGGTTATA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 977798 18 - 2385121 TGCTCCTGT-AAGGTTATA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2420085 18 + 4274983 TGCTCCTGT-AAGGTTATA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28622200 18 + 49145316 TGCTCCTCT-AAGGTTATA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5477342 18 + 8899380 TGCTCCTCT-AAGGTTTTA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1684102 18 - 2680843 TGCTCCTCT-AAGGTTATA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 425701 18 - 4471408 TGCTCCTCT-AAGGTTATA i aotNan1.NW_018505377v1 I 21 C 0 s micMur3.chr22 4005547 18 - 30143674 TGCTTCTGT-AAGGTTATC i micMur3.chr22 C 0 C 0 s mm10.chr7 111155369 17 - 145441459 TGCTTTCATGAAGCTTA-- i mm10.chr7 C 0 C 0 s canFam3.chr1 4672209 18 - 122678785 TGCTTTGGT-AAGGTTATA i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 412711 18 + 643850 TGCTTTTAT-AAAGTGATA i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 625664 562 + 2501019 I a score=4180201.000000 s hg38.chr19_GL383574v1_alt 154480 263 + 155864 ATATGATTTCTTATT-----CATTTGTAGCCCAC---------CTGTGTGGATAAT--AGCATCACAGGAGTTATTG-TCCAGAATTA---------CTG--TAGCCTTCCTCACTTTATCTTATTTTT-----CCCCCCGACAGGAAAGGACTTAGAAGCCTTACAAATACATCTGTGCATTCTTGCTTCAGA----CTTTACAACTGAGGGCCAGCCCAGTCTGGAAGCATCTCTTATTAATGTTACAAGGAAACCGCTACCTCAGCAAACAAAAGGAATGGAGGAGGAGACTTACAA--- s panTro5.chr19 36222002 268 + 61309027 ATATGATTTCTTATTTCATTCATTTGTAGCCCAC---------CTGTGTGGATAAT--AGCATCACAGGAGTTATTG-TCCAGAATTA---------CTG--TAGCCTTCCTCACTTTATCTTATTTTT-----CCCCCCGACAGGAAAGGACTTAGAAGCTTTACAAATACATCTGTGCATTCTTGCTGCAGA----CTTTACAACTGAGGGCCAGCCCAGTCTGGAAGCATCTCTTATTAATGTTACAAGGAAACTGCTACCTCAGCAAACAAAAGGAATGGAGGAGGAGACTTACAA--- i panTro5.chr19 C 0 C 0 s panPan2.chr19 39966218 268 + 64411610 ATATGATTTCTTATTTCATTCATTTGTAGCCCAC---------CTGTGTGGATAAT--AGCATCACAGGAGTTATTG-TCCAGAATTA---------CTG--TAGCCTTCCTCACTTTATCTTATTTTT-----CCCCCCGACAGGAAAGGACTTAGAAGCTTTACAAATACATCTGTGCATTCTTGCTGCAGA----CTTTACAACTGAGGGCCAGCCCAGTCTGGAAGCATCTCTTATTAATGTTACAAGGAAACTGCTACCTCAGCAAACAAAAGGAATGGAGGAGGAGACTTACAA--- i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6377459 268 - 8369475 ATATGATTTCTTATTTCATTCATTTGTAACCCAC---------CTGTGTGGATAAT--AGCATCACAGGAGTTATTG-TCCAGAATTA---------CTG--TAGCCTTCCTCACTTTATCTTATTTTT-----CCCCCTGACAGGAAAGGACTTAGAAGCCTTACAAATACATCTGTGCATTCTTGCTTCAGA----CTTTACAACTGAGGGCCAGCCCAGTCTGGAAGCATCTCTTATTAATGTTACAAGGAAACCGCTACCTCAGCAAACAAAAGGAATGGAGGAGGAGAGTTACAA--- i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63975788 270 - 106955855 ATATGATTTCTTATTTCATTCATTTATAGCCCAC---------CTGTGTGGATAAT--AGCATCAGAGGAGTTATTG-TCCAGAATTA---------CTG--TAGCCTTCCTCACTTTATCTTATTTTTTC---CCCCCTGACAGGAAAAGACTTAGAAGCCTTACAAATACATCTGTGCATTCTTGCTTCAGA----CTTTACAACTGAGGACCAGCCCAGTCTGGAAGCATCTCTTATTAATGTTACAAGGAAACTGCTACCTCAGCAAACAAAAGGAATGGAGGAGGAGACTTATAA--- i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30291018 272 + 53671032 ATATGATTTCTT-----ATTCATTTGTCGCCCAC---------CTGTGTGGATAAC--AGCATCACAGGAGTTATTG-TCTGGAATTACTCATTGTCCTG--TAGCCTTCCTCACTTTATCTTATTTTT-----CCCCCCGACAGGAAAGGACTTAGAAGCCTTACAAATACATCTGTGCATTCTTGCTTCAGA----CTTTACAACTGAGGGCCAGCCCAGTCTGGAAGCATCTCTTGTTAATGTTACAAGGAAACCGCTACCTCAGCAAACAAAAGGAATGGAGGAGGAGACTTATAA--- i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34745184 272 + 59248254 ATATGATTTCTT-----ATTCATTTGTCGCCCAC---------CTGTGTGGATAAC--AGCATCACAGGAGTTATTG-TCTGGAATTACTCATTGTCCTG--TAGCCTTCCTCACTTTATCTTATTTTT-----CCCCCCGACAGGAAAGGACTTAGAAGCCTTACAAATACATCTGTGCATTCTTGCTTCAGA----CTTTACAACTGAGGGCCAGCCCAGTCTGGAAGCATCTCTTGTTAATGTTACAAGGAAACCGCTACCTCAGCAAACAAAAGGAATGGAGGAGGAGACTTATAA--- i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4620668 272 - 13342542 ATATGATTTCTT-----ATTCATTTGTCGCCCAC---------CTGTGTGGATAAC--AGCATCACAGGAGTTATTG-TCTGGAATTACTCATTGTCCTG--TAGCCTTCCTCACTTTATCTTATTTTT-----CCCCCCGACAGGAAAGGACTTAGAAGCCTTACAAATACATCTGTGCATTCTTGCTTCAGA----CTTTACAACTGAGGGCCAGCCCAGTCTGGAAGCATCTCTTGTTAATGTTACAAGGAAACCGCTACCTCAGCAAACAAAAGGAATGGAGGAGGAGACTTATAA--- i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5542424 277 + 7714307 GTATGATTTCTTATTTCATTCATTTGTAGCCCAC---------CTGTGTGGATAAC--AGCATCACAGGAGTTATTG-TCTGGAATTACTCATTGTCCTG--TAGCCTTCCTCACTTTATCTTATTTTT-----CCCCCCGACAGGAAAGGACTTAGAAGCCTTACAAATACATCTGTGCATTCTTGCTTCAGA----CTTTACAACTGAGGGCCAGCCCAGTCTGGAAGCATCTCTTGTTAATGTTACAAGGAAACCGCTACCTCAGCAAACAAAAGGAATGGAGGAGGAGACTTATAA--- i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29345133 279 + 50890351 ATATGATTTCTTATTTCATTCATTTGTAGCCCAC---------CTGTGTGGATAAC--AGCATCACAGGAGTTATTG-TCTGGAATTACTCATTGTCCTGTATAGCCTTCCTCACTTTATCTTATTTTT-----CCCCCCGACAGGAAAGGACTTAGAAGCCTTACAAATACATCTGTGCATTCTTGCTTCAGA----CTTTACAACTGAGGGCCAGCCCAGTCTGGAAGCATCTCTTGTTAATGTTACAAGGAAACCGCTACCTCAGCAAACAAAAGGAATGGAGGAGGAGACTTATAA--- i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 977816 277 - 2385121 GTATGATTTCTTATTTCATTCATTTGTAGCCCAC---------CTGTGTGGATAAC--AGCATCACAGGAGTTATTG-TCTGGAATTACTCATTGTCCTG--TAGCCTTCCTCACTTTATCTTATTTTT-----TCCCCCGACAGGAAAGGACTTAGAAGCCTTACAAATACATCTGTGCATTCTTGCTTCAGA----CTTTACAACTGAGGGCCAGCCCAGTCTGGAAGCATCTCTTGTTAATGTTACAAGGAAACCGCTACCTCAGCAAACAAAAGGAATGGAGGAGGAGACTTATAA--- i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2420103 278 + 4274983 ATATGATTTCTTATTTCGTTCATTTGTAGCCCAC---------CTGCGTGGGTAAC--AGCATCACAGGAGTTATTG-TCTGGAGTTACTCATTGTCCTG--TAGCCTCCCTCACTTTATCTTATTTTT-C---CCCCCCGACAGGAAAGGACTTAGAAGCCTTACAAATACATCTGTGCATTCTTGCTTCAGA----CTTTACTACTGAGGGCCAGCCCAGTCTGGAAGCATCTCTTGTTAATGTTACAAGGAAACCGCTACCTCAGCAAACAAAAGGAATGGAGGAGGAGACTTATAA--- i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28622218 274 + 49145316 ATATGATTTCTT-----ATTCATTTGTATCCCAC---------CTATGTGGATAAT--AGCTTCATGGGCGTTATTG-TCTAGAATTACTCATTGTCCTA--TAGCTTTCCTCACTTTATCTTATTTCT-C---CCCCCTGACAGGAAATGACTTAGAAGCCTTACAAATACATCTGTGCATTTTTGCTTTACAAACGCACAGCAACTGAGGGCCAGCCTAGTCTGGAAGCACC---TCTTAATGTTACACGGAAACAGCTACCTCAGCAAACAAAAGGAACGGAGGAGGAGACTTAAAA--- i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5477360 273 + 8899380 ATATGATTTCTT-----ACTCATTTGTAGCCCAC---------CTGTGTGGATAAT--AGCTTCGTGGGCATTATTG-TCTGGAATTACTCATTGTCCTA--TAGCTTTCCTCACTTTATCTTATTTTT-C---CTCCTTAACAGGAAATGACTTAGAAGCCTTACAAATACATCTGTGCATTTTTGCTTCAGA----CTTTACAACTGAGGGCCAGCCCAGTCTGGAAGCACCTCTTCTTAATGTTACAAGGAAACAGCTACCTCAGCAAACAAAAGGAACGGAGGAGGAGACTTACAA--- i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1684120 272 - 2680843 ATATGATTTCTT-----ACTCATTCGTAGCCCAC---------CTGTGTGGATGAT--AGCTTCATGGGCGTTATTG-TCTGGAATTACTCATTGTCCTA--TAGCTTTCCTCACTTTATCTTATTTTT-T---CCCCCCGACAGGAAATGACTTAGAAGCCTTACAAATACATCTGTGCATTTTTGCTTCAGA----CTTTACAACTGAGGGCCAGCCCAGTCTGGAAGCACCTCTTATAAATGTTACAA-GAAACAGCTACCTCAGCAAACAAAAGGAAAGGAGGAGGAGACTTATAA--- i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 425719 274 - 4471408 ATATGATTTCTT-----AATCATTTGTAGCCCAC---------CTGTGTGGATAAT--AGCTTCATGGGCGTTATTG-TCTGGAATTACTCATTGTCCTA--TAGCTTTCCTCACTTTATCTTATTTTC-C--TCCCCCTGACAGGAAATGACTTAGAAGCCTTACAAATACATCTGTGCATTTTTGCTTCAGA----CTTTACTACTGAGGGCCAGCCCAGTCTGGAAGCACCTCTTCTTAATATTACAAGGAAACAGCTACCTCAGCAAACAAAAGGAACGGAGGAGGAGACTTATAA--- i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4005565 272 - 30143674 ATATGATTTCTT-----ATTAATTTGTAGCCCAC---------CTTTGTGAATAAT--AGCATTGCAGAAGTTAATGTTCCAGAATTACTCCTTGTCTTA--TAGCCTTCCTAACTTTATTTTATTTTT-----CCCCTT-ACAGGAAATGACTTAGAGGCCTTACAAATACATCTGTGCATTCTTGCTTCAGA----CTTCACAATTGAGGGCCAGCCCAGTCTGGAAGCACCTCTTATTAATGTTACAAGGAAACCGCTACCTCAGCAAACAAAAGGAAAGGAGGAGAAGACTTATAA--- i micMur3.chr22 C 0 I 3 s proCoq1.NW_012149263v1 626226 269 + 2501019 ATATGATTTCTT-----ATTCATTTGTAGCCCAC---------CTGTGTAAATAAT--AGCATTGCAGAAGTTAATGTTCCAGAATTACTCATTGTCTTA--TAGCCTTCCTAACTTTATTTTATTTTT-----CCCCTT-ACAGGAAATGACTTAGAGGCCTTACAAATACATCTGTGCATTCTTGCTTCAGA----CTTCACAATTGAGGGCCAACCCAGTCTGGAAGCACCTCTTATTAATGTTACAAGGAAACCGCTACCTCAGCAAACAAAAGGAA---AGGAGAAGACTTATAA--- i proCoq1.NW_012149263v1 I 562 I 25 s mm10.chr7 111155386 267 - 145441459 TTATGGTGTCTT--------GATGTAAAGCTCAC---------CAAAGTGGAGGATACAGCATTTTAGAAG----TG-TTCAGAATTGCTCTTTGTCCTA--CAGCCTCCTTGACTTCATCTTTTCTTT-CTTTCTTTCTTACAGGAAATGACTTAGAGGCCTTATGAATACATCTGTGCTTTCTTGCTTCAGA----CTTTACAACTGCAGGCCAACCCAGTCTGGAAGCACTTTTTATTAATGTTACAAGGAAACCGCTACCTCAGCAAACAAAAGAA----AGGAGAAGACACACAA--- i mm10.chr7 C 0 I 3 s canFam3.chr1 4672227 270 - 122678785 -TATGATTTCCT-----ATTCACTTA-AACCCAC---------CTTTATGTATTGT--AGCATTTCAGGAGTTAATGTTTCGGAATTACTCATCGTCCTG--TAACTTTCCTAACTTTATCTTATTTTC-----CCCCTC-ACAGGAAATGACTTAGAGGCCTTACAAATACATCTGTGCATTCTTGCTTCAGA----CTTTACAATTGAGGGCCAACCCAGTCTGGAAGCACCTCTTATTACTGTTACAAGGAAACTGCTACCTCAGCAAACAGAAGGGAAGGAGGAGAAGACTTGTAA--- i canFam3.chr1 C 0 I 3 s dasNov3.JH563638 412729 293 + 643850 ATATAATTTCTTACTTCACTCA-GTGTGGATAATAACTATTTGCTGTGTGGATGTT--AGCATTGCAAGAGTTAACGTTCCAGAATTACTCATCGTCCTG--TAACCTTACTGATTTTATCTTATGTTT-TTTTTTCCCTGACAGGAAATGACTTAGAGGCCTTAGAAATACATCTGTGCATTCTTGCTTCAGA----CTTTACAATTAAGGGCCAACTCATTCTGGAAGCACCTCTTATTAATATTACAAGGAAACTGCTACCTCAGCCAACAAAAGGAAAAGAGGAGAAGACTTACAATAA i dasNov3.JH563638 C 0 C 0 a score=216471.000000 s hg38.chr19_GL383574v1_alt 154743 28 + 155864 CAA---ACGCCATTTAAAAAAAAAAGAAA-AA s panTro5.chr19 36222270 28 + 61309027 CAA---ATGCCATTTAAAAAAAAAAGAAA-AA i panTro5.chr19 C 0 C 0 s panPan2.chr19 39966486 27 + 64411610 CAA---ATGCCATTT-AAAAAAAAAGAAA-AA i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6377727 27 - 8369475 CAA---ATGCCATTT-AAAAAAAAAGAAA-AA i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63976058 28 - 106955855 CAA---ATGCCATTTAAAAAAAAAAGAAA-AA i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30291290 28 + 53671032 CAA---ATGCCATTTAAAAAAAAAAGAAA-AA i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34745456 28 + 59248254 CAA---ATGCCATTTAAAAAAAAAAGAAA-AA i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4620940 28 - 13342542 CAA---ATGCCATTTAAAAAAAAAAGAAA-AA i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5542701 28 + 7714307 CAA---ATGCCATTTAAAAAAAAAAGAAA-AA i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29345412 28 + 50890351 CAA---ATGCCATTTAAAAAAAAAAGAAA-AA i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 978093 28 - 2385121 CAA---ATGCCATTTAAAAAAAAAAGAAA-AA i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2420381 28 + 4274983 TAA---ATGCCATTTAAAAAAAAAAGAAA-AA i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28622492 28 + 49145316 TAACACATGCCATTT---AAAAAAACAAC-AA i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5477633 29 + 8899380 TAACACATGCCATTT---AAAAAAAAAACAAA i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1684392 29 - 2680843 TGACACATGCCATTT--AAAAAAAACAAC-AA i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 425993 29 - 4471408 TAACACATGCCATTT--AAAAAAAAAAAC-AA i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4005840 22 - 30143674 CAA---ATGCCATTTTTAAAAAAAG------- i micMur3.chr22 I 3 C 0 s mm10.chr7 111155656 22 - 145441459 CAA---ATGCCATGTTTAAAGAAAA------- i mm10.chr7 I 3 C 0 s canFam3.chr1 4672500 24 - 122678785 CAA---ATGCCATTTTTAAAAAAAACA----- i canFam3.chr1 I 3 C 0 s dasNov3.JH563638 413022 23 + 643850 CAA---ACGCGAGTTTTTAAAAAGAG------ i dasNov3.JH563638 C 0 C 0 e proCoq1.NW_012149263v1 626495 25 + 2501019 I a score=8494603.000000 s hg38.chr19_GL383574v1_alt 154771 523 + 155864 CTTGTTTTCAGGAAACATTAGAGGAAATTTGGAGAATTTCAGCATTGCATAGAAGCAGCCTTACAGGTAAA--CGGATTTGACGGGCAGGCTCTGTCAAAATTCTGCAGAAGTTTGATCTTCCTTCTT-AAGGACTTTGTGTGAAGTAATTCTT---TACTGC-TTTTAAATTGCTGTTGATCAGCTTCTGGGTTTTTGGGTTCTAACTTTTTTGGGTATATTGAAGACACAGTGTATTACA---------TTATATTACATTTTTAAACGTTAAGTTATTTTTCTGCCATTGTAAATACAAGTATCAAAATATTCTTGCAAAG-------AAGTAAACATTTTTCTCAGCAAGCATATCCTTTTAGTAAGAGAGTGGAATGCTAAACAGTTCTTATCCAGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGATCCTGTCTACACTGAAAATATTAATTATATAAACCTGTTG--TCTCTCACCTCTACATTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTCGATTTGCAG s panTro5.chr19 36222298 523 + 61309027 CTTGTTTTCAGGAAACATTAGAGGAAATTTGGAGAATTTCAGCATTGCATAGAAGCAGCCTTACAGGTAAA--CGGATTTGACGGGCAGGCTCTGTCAAAATTCTGCAGAAGTTTGATGTTCCTTCTT-AAGGACTTTATGTGAAGTAATTCTG---TACTGC-TTTTAAATTGCTGTTGATCAGCTTCTGGGTTTTTGGGTTCTAACTTTTTTGGGTATATTGAAGACACAGTGTATTACA---------TTATATTACATTTTTAAACGTTAAGTTATTTTTCTGCCATTGTAAATACAAGTATCAAAATATTCTTACAAAG-------AAGTAAACATTTTTCTCAGCAAGCATATCCTTTTAGTAAGAGAGTGGAATGCTAAACAGTTCTTATCCAGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGATCCTGTCTACACTGAAAATATTAATTATATAAACCTGTTG--TCTCTCACCTCTACGTTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTCGATTTGCAG i panTro5.chr19 C 0 C 0 s panPan2.chr19 39966513 523 + 64411610 CTTGTTTTCAGGAAACATTAGAGGAAATTTGGAGAATTTCAGCATTGCATAGAAGCAGCCTTACAGGTAAA--CGGATTTGACGGGCAGGCTCTGTCAAAATTCTGCAGAAGTTTGATCTTCCTTCTT-AAGGACTTTATGTGAAGTAATTCTG---TACTGC-TTTTAAATTGCTGTTGATCAGCTTCTGGGTTTTTGGGTTCTAACTTTTTTGGGTATATTGAAGACACAGTGTATTACA---------TTATATTACATTTTTAAACGTTAAGTTATTTTTCTGCCATTGTAAATACAAGTATCAAAATATTCTTACAAAG-------AAGTAAACATTTTTCTCAGCAAGCATATCCTTTTAGTAAGAGAGTGGAATGCTAAACAGTTCTTATCCAGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGATCCTGTCTACACTGAAAATATTAATTATATAAACCTGTTG--TCTCTCACCTCTACGTTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTCGATTTGCAG i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6377754 523 - 8369475 CTTGTTTTCAGGAAACATTAGAGGAAATTTGGAGAATTTCAGCATTGCATAGAAGCAGCCTTACAGGTAAA--CGGATTTGACGGGCAGGCTCTGTCAAAATTCTGCAGAAGTTTGATCTTCCTTCTT-AAGGACTTTGTGTGAAGTAATTCTG---TACTGC-TTTTAAATTGCTGTTGATCAGCTTCTGGGTTTTTGGGTTCTAACTTTTTTGGGTATATTGAAGACACAGTGTATTACG---------TTATATTACATTTTTAAACGTTAAGTTATTTTTCTGCCATTGTAAATACAAGTATCAAAATATTCTTGCAAAG-------AAGTAAACATTTTTCTCAGCAAGCATATCCTTTTAGTAAGAGAGTGGAATGCTAAACAGTTCTTATCCAGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGATCCTGTCTACACTGAAAATATTAATTATATAAACCTGTTG--TCTCTCACCTCTACGTTGGATCACATGGTCACCTGCCTCATAGAAATGCCTTTTTTAAAACTTCGATTTGCAG i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63976086 523 - 106955855 CTTGTTTTCAGGAAACATTAGAGGAAATTTGGAGAATTTTAGCATTGCATAGAAGCAGCCTTACAGGTAAA--CGGATTTGACGGGCAGGCTCTGTCAAAATTCTGCAGAAGTTTGATCTTCCTTCTT-AAGGACTTTGTGTGAAGTAATTCTG---TACTGC-TTTTAAATTGCTGTTGATCAGCTTCTGGGTTTTTGGGTTCTAACTTTTTTGGGTATATTGAAGACACGGTGTATTACA---------TTATATTACATTTTTAAAAGTTAAGTTATTTTTCTGCCATTGTAAATACAAGTATCAAAATATTCTTGCAAAG-------AAGTAAACGTTTTTCTCAGCAAGCATATCCTTTTAGTAAGAGAGTGGAATGCTAAACAGTTCTTATCCAGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGATCCTGTCTACACTGAAAATATTAATTATATAAACCTGTTG--TCTCTAACCTCTACATTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTCGATTTGCAG i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30291318 522 + 53671032 CTTGTTTTCAGAAAACATTAGAGGAAATTCGGAGAATTTTAGCATTGCATAGAAGCAGCTTCACAGGTAAA--CAGATTTGACGGGCAGGCTCTGTCAAAATTCTGCAGAAGTTTGAT----CTTCTT-AAGGACTTTGTGTGAAGTAATTCTG---TACTGCTTTTTAAATTGCTGTTGATCAGCTTCTGGGTTTTTGGGTTCTAACTTTTTTGGGTATATTGAAGACATGGTGTACTACA---------TTATATTACATTTTTAAAAGTTAAGTTATTTTTCTGCCATTGTAAATACAAGTATCAAACTATTCTTGCAAAG-------AAGTAAACATTTTTCTCAGCAAGCATATCCTTTTAGTAAGAGAGTGGAATGCTAAACAGTTCTTATCCAGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGATCTTGCCTACACTGAAAATATTAATTATATAAACCTGTTGTCTCTCTCACCTCTACGTTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTCGATTTCCAG i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34745484 522 + 59248254 CTTGTTTTCAGAAAACATTAGAGGAAATTCGGAGAATTTTAGCATTGCATAGAAGCAGCTTCACAGGTAAA--CAGATTTGACGGGCAGGCTCTGTCAAAATTCTGCAGAAGTTTGAT----CTTCTT-AAGGACTTTGTGTGAAGTAATTCTG---TACTGCTTTTTAAATTGCTGTTGATCAGCTTCTGGGTTTTTGGGTTCTAACTTTTTTGGGTATATTGAAGACATGGTGTACTACA---------TTATATTACATTTTTAAAAGTTAAGTTATTTTTCTGCCATTGTAAATACAAGTATCAAACTATTCTTGCAAAG-------AAGTAAACATTTTTCTCAGCAAGCATATCCTTTTAGTAAGAGAGTGGAATGCTAAACAGTTCTTATCCAGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGATCTTGCCTACACTGAAAATATTAATTATATAAACCTGTTGTCTCTCTCACCTCTACGTTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTCGATTTCCAG i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4620968 522 - 13342542 CTTGTTTTCAGAAAACATTAGAGGAAATTCGGAGAATTTTAGCATTGCATAGAAGCAGCTTCACAGGTAAA--CAGATTTGACGGGCAGGCTCTGTCAAAATTCTGCAGAAGTTTGAT----CTTCTT-AAGGACTTTGTGTGAAGTAATTCTG---TACTGCTTTTTAAATTGCTGTTGATCAGCTTCTGGGTTTTTGGGTTCTAACTTTTTTGGGTATATTGAAGACATGGTGTACTACA---------TTATATTACATTTTTAAAAGTTAAGTTATTTTTCTGCCATTGTAAATACAAGTATCAAACTATTCTTGCAAAG-------AAGTAAACATTTTTCTCAGCAAGCATATCCTTTTAGTAAGAGAGTGGAATGCTAAACAGTTCTTATCCAGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGATCTTGCCTACACTGAAAATATTAATTATATAAACCTGTTGTCTCTCTCACCTCTACGTTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTCGATTTCCAG i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5542729 519 + 7714307 CTTGTTTTCAGAAAACATTAGAGGAAATTCGGAGAATTTTAGCATTGCATAGAAGCAGCTTCACAGGTAAA--CAGATTTGACGGGCAGGCTCTGTCAAAATTCTGCAGAAGTTTGA-------TCTT-AAGGACTTTGTGTGAAGTAATTCTG---TACTGCTTTTTAAATTGCTGTTGATCAGCTACTGGGTTTTTGGGTTCTAACTTTTTTGGGTATATTGAAGACATGGTGTACTACA---------TTATATTACATTTTTAAAAGTTAAGTTATTTTTCTGCCATTGTAAATACAAGTATCAAACTATTCTTGCAAAG-------AAGTAAACATTTTTCTCAGCAAGCATATCCTTTTAGTAAGAGAGTGGAATGCTAAACAGTTCTTATCCGGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGATCTTGCCTACACTGAAAATATTAATTATATAAACCTGTTGTCTCTCTCACCTCTACGTTGGATCACATGGTCATCTGCCTCATGGAAATGCCTTTTTTAAAACTTCGATTTCCAG i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29345440 522 + 50890351 CTTGTTTTCAGAAAACATTAGAGGAAATTCGGAGAATTTTAGCATTGCATAGAAGCAGCTTCACAGGTAAA--CAGATTTGACGGGCAGGCTCTGTCAAAATTCTGCAGAAGTTTGAT----CTTCTT-AAGGACTTTGTGTGAAGTAATTCTG---TACTGCTTTTTAAATTGCTGTTGATCAGCTTCTGGGTTTTTGGGTTCTAACTTTTTTGGGTGTATTGAAGACATGGTGTACTACA---------TTGTATTACATTTTTAAAAGTTAAGTTATTTTTCTGCCATTGTAAATACAAGTATCAAACTATTCTTGCAAAG-------AAGTAAACATTTTTCTTAGCAAGCATATCCTTTTAGTAAGAGAGTGGAATGCTAAACAGTTCTTATCCAGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGATCCTGCCTACACTGAAAATATTAATTATATAAACCTGTTGTCTCTCTCACCTCTACGTTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTCGATTTCCAG i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 978121 522 - 2385121 CTTGTTTTCAGAAAACATTAGAGGAAATTCGGAGAATTTTAGCATTGCATAGAAGCAGCTTCACAGGTAAA--CAGATTTGACGGGCAGGCTCTGTCAAAATTCTGCAGAAGTTTGAT----CTTCTT-AAGGACTTTGTGTGAAGTAATTCTG---TACTGCTTTTTAAATTGCTGTTGATCAGCTTCTGGGTTTTTGGGTTCTAACTTTTTTGGGTATATTGAAGACATGGTGTACTACA---------TTATATTACATTTTTAAAAGTTAAGTTATTTTTCTGCCATTGTAAATACAAGTATCAAACTATTCTTGCAAAG-------AAGTAAACATTTTTCTCAGCAAGCATATCCTTTTAGTAAGAGAGTGGAATGCTAAACAGTTCTTATCCAGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGATCTTGCCTACACTGAAAATATTAATTATATAAACCTGTTGTCTCTCTCACCTCTACGTTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTCGATTTCCAG i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2420409 522 + 4274983 CTTGTTTTCAGAAAACATTAGAGGAAATTCAGAGAATTTTAGCATTGCATAGAAGCAGCTTTACAGGTAAA--CGGATTTGACGGGCAGGCTCTGTCAAAATTCTGCAGAAGTTTGAT----CTTCTT-AAGGACTTTGTGTGAAGTAATTCTG---TACTGCTTTTTAAATTGCTGTTGATCAGCTTCTGGGTTTTTGGGTTCTAACTTTTTTGGGTATATTGAAGATATGGTGTATTACA---------TTATATTACATTTTTAAAAGTTAAGTTATTTTTCTGCCATTGTAAATACAAGGATCAAACTATTCTTGCAAAG-------AAGTAAACATTTTTCTCAGCAAGCATATCCTTTTAGTAAGAGAGTGGAATGCTAAACAGTTCTTATCCAGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGATCCTGCCTACACTGAAAATATTAATTATATAAACCTGTTGTCTCTCTCACCTCTACGTTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTCTAAAACTTCGATTTGCAG i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28622520 524 + 49145316 CTTGTTTTCAGAAAAC-----AGGAAATTTGGAGATTTTTAGCATTGCATACAAGCAGCTTTACAGGGAAA--TGGATTTGACGGGCAGGCTCTGTCAAAATTCTGCAGAAGTTTGATCTTCCTTCTT-AAGGACTTTGTGTGAATTAATTCTGTACTACTGCTTTTTAAATTGCTGTTGATCAGCTTCTGGGTTTTTGGGTTCTAACTTTTTTGAGTATATTGAAGACATGCTGTATTACA---------TTATATTACATTTTTAAAAGTTAAGTTATTTTTCTGCCATTGTAAATAGAAGTATCAAAATATTCTTGCAAAG-------AAGTAAACATTTTTCTCAGCAAGCATATTCTTTTATTAATAGAGTAGAATGCTAAAAAGTTCTTATCCAGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGATCCTGCCTATACTGAAAATATTAATTATATAAACGTGTTGTCCTTCTCACCTCTGTGTTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTCAATTTGCAG i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5477662 521 + 8899380 CTTGTTTTCAGAAAAC-----AGGAAATTTGGAGATTTTTAGCGTTGCATACAAGCAGCTTTACAGGGAAA--TGGATTTGACGGGCAGGTTCTGTCAAAATTCTGCAGAAGTTTGATCTTCCTTCTT-AAGGACTTTGTGTGAATTAATTCTG---TACTGCTTTTTAAATTGCTGTTGATCAGCTTCTGGGTTTTTGGGTTCTAACTTTTTTGGGTATATTGAAGACATGCTGTATTACA---------TTATATTACATTTTTAAAAGTTAAGTTATTTTTCTGCCATTGTAAATATAAGTATCAAAATATTCTTGCAAAG-------AAGTAAACATTTTTCTCAGCAAGCATATTCTTTTATTAATAGAGTAGAATGCTAAATTGTTCTTATCCAGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGCTCCTGCCTACACTGAAAATATTAATTATATAAACGTGTTGTCCTTCTCACCTCTGTGTTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTCGATTTGCAG i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1684421 521 - 2680843 CTTGTTTTCAGAAAAC-----AGGAAATTTGGAGATTTTTAGCATTGCATGTAAACAGCTTTACAGGAAAA--TGGATTTGACAGGCAGGCTCTGTCAAAATTCTGCAGAAGTTTGACCTTCCTTCTT-AAGGACATTGTGTGAATTAATTCTG---TACTGCTTTTTAAATTGCTGTTGATCAGCTTCTGGGTTTTTGGGTTCTAACTTTTTTGGGTATATTGAAGACATGCTGTATTACA---------TTATATTACATTTTTAAAAGTTAAGTTATTTTTCTGCCATTGTAAATAGAAGTATCAAAATATTCTTGCAAAG-------AAGTAAACATTTTTCTCAGCAAGCGTATTCTTTTATTAATAGAGTAGAATGCTAAATAGTTCTTATCCAGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGATTCTGCCTACACTGAAAATATTAATTATATAAACGTGTTGTCCTTCTCACCTCTGTGTTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTCGATTTGCAG i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 426022 521 - 4471408 CTTGTTTTCAGAAAAC-----AGGAAATTTGGAGATTTTTAGCATTGCATACAAGCAGCTTTACAGGGAAA--TGGATTTGACGGGCAGGCTCTGTCAAAATTCTGCAAAAGTTTGATCTTCCTTCTT-AAGGACTTTGTGTGAATTAATTCTG---TACTGCTTTTTAAATTGCTGTTGATCAGCTTCTGGGTTTTTGGGTTCTAACTTTTTTGGGCATATTGAAGACATGCTGTATTACA---------TTATATTACATTTTTAAAAGTTAAGTTATTTTTCTGCCATTGTAAATAGAAGTATCAAAATATTCTTGCAAAG-------AAGTAAACATTTTTCTCAGCAAGCGTATTCTTTTATTAATAGAGTAGAATGCTAAATAGTTCTTATCCAGCATTTTGGACAT-CTTTTATTTTTTGTCAGAGATCCTGCCTACACTGAAAATATTAATTATATAAACGTGTTGTCCTTCCCACCTCTGTGTTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTCGATTTGCAG i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4005862 529 - 30143674 TTTGTTTTCAGAAAACATTAGAGGAAATTTGGAAATTTTTTGCATTGCAGAGACAAAGCTTTACAGGTAAA--TGGATTTGACAGGCAGGCTCTGTCAAAATTCTGCAGAGGTTTGATCTTCCTTCCT-AAGGACTTTGTTTAAAGTAATTCCG---TACTGCTTTTTAAATTGCTGTTGATCAGCTTGTGGGTTTTTGGGTTCTAACTTTTT--GGTATGTTGAAGAtacattgtattaca---------ttatattacattTTTAAAGGTTAAGTTATTTTTCTGCCATTGTAAATACAAATATGGAAATATTCTTGCAAAGCAATTATAAGTAAACATTTTTCTCAGCAAGCATATCTTTTTATTGAGAGAGTGGAATGCTAAACAGTTCTTATGTAGCATTTTGGACACACTTTTATTTTTTGTCAGAGGTCCTGCCTACACTGAAAATATTAGTTATATAAACCTGTTGTCCTTCTCACATCTACATTGGATCAC---GTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTAGATTTGCAG i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 626520 528 + 2501019 TTTGTTTTCAGAAAACATTAGAGGAAATTTGGAAATTTTTTGCATTGCAGAGACAAAGCTTTACAGGTAAA--TGGATTTGACAGGCAGGCTCTGTCAAAATTCTGCAGAGGTTTGATCTTCCTTCCT-AAGGACTTTGTGTAAAGTAATTCTC---TACTGCTTTTTAAATTGCTGTTGATCAGCTTGTGGGTTTTTGGGTTCTAACTTTTT--GGTATGTTGAAGAtacattgtattaca---------ttatattacattTTTAAAAGTTAAGTTATTTTTCTGCCATTGTAAATACAAATATGGAAATATTCTTGC-AAGCAATTATAGGTAAGCATTTTTCTCAGCAAGCATATCTTTTTATTAAGAGAGTGGAATGCTAAACAGTTCTTATGTAGTGTTTTGGACACACTTTTATTTTTTGTCAGAGGTCCTGCCTACACTGAAAATATTAATTATATAAACCTGTTGTCCTTCTCACATCTACATTGGATCAC---GTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTAGATTTGCAG i proCoq1.NW_012149263v1 I 25 C 0 s mm10.chr7 111155678 488 - 145441459 CTTGTTCCCAGAAACCTTTACAGGAGATTTGGAAGTTTTTAGCACTG---AGAAGCAGCTTTCCAGGTAAA--TGGATTTGACAGGCAGGCTCTGTCAGAATTCTGCAGAGGTGTGTTCTTCCTTC----AGGACTTCTTGTGAAGTAACCCCT---T-CCGCCT----AAATGCTGTTGACCAGC-----------TGGGGTC---CTTTTT--GGTATATAGAAGA----------TACA---------TTATATTACA-TTTTAAAAGTTAAGTTATTTTTCTGCCATTGTAAATGTAAGTATCAAAATATTCTTGCAAAGCAATTATAAGCAAACACTTTCCTCAGCAAGCATATCTTCAT----TGAGGGTAGGATGCTGAACAG---TTACAGAGCATTTCGGACAC-TGTTATTTTTTTGTTAGAGTTCCTGCCTACACTGAAAATATTAATTATATAAATCTGTTATTTTTCTCACCTTTATGTTGGATCACATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAACTTAGATTTGCAG i mm10.chr7 C 0 C 0 s canFam3.chr1 4672524 521 - 122678785 CTTGTTTTCAGAAAATATTAAAGGAAATTTGGAAATTTTTCCCATTG---AGAAGAAGCTTTGCAGGTGAA--TGGATTTGGCAGGCGGGCTCTGTCAAAATTCTGAAGCGGTTTGCTCTTCCTTCCT-AAGGACTTAGTGTGAAGTAA--CTG---TACTGCTTTTTAAATTGCTGTTGATCAGCTTGTGGGTTTTTGGGTTCTAATTTTTCT-GGTATATTGAAGAtacattatattaca---------ttatattacattTTTTAAAGTTAAGTTATTTTTCTGCCATTGTAAATACAAGTATCAAAATATTCTTGCAAAGCAATTATAGGTAAACATTTTTCTCGGCAAGCATATCTTTTTATTAAGAGAGTGGAATGCT-AACAGTTCTTATACAGCATTTTGGACACACTTGTATTTTTTGTCAGCAGTCCTGTCTACACTGAAAATACTAATTATACATACTTGT------TCTCACATCTACGTTGGATCACATGGTCACCTGCCTCCTGGAAATGCCTTTTTCAAAACTTAGATTTGCAG i canFam3.chr1 C 0 C 0 s dasNov3.JH563638 413045 535 + 643850 -TTGTTTTCAGAAAACATTAGAGGAAATCTGGAAATTTTCAGCATTA---AGAAGAAGCTTTACAGGGATATTTGGGTTTGGCAGGCAGGCTCTGTCAAAATTCTGCAGAGGTTTCAT----CTTCTTAAAGGGCTCAGTGTGAAGTAATTCTG---TACTGCTTTTTAAATTGCTGTTGATCAGCATGTGGATTTTTGGGTTCTAACTTTTCT-GGTATATTGAAGACACATGATATTACATATAATACCTTATATTACATTTTTAAAACTTAAGTTATTTTTCTGTCATTGTAAATAGAAGTATCAAGATATTCTTGCAAGC-AATTATATGTAAACATTTTTCTCAGCAAGCATATCTTTTTATTAAGAGAGTGGAATGCTAAACAGTTCTTACACAGCATTTTGGATACACTTTTATTTTACGTCAAAGACCTTGCCAATACTGAAAA-ATTAACTATGTAAACCTGTTGTCTTTCTCAAACCTATGTTGAATCTCATGGTCACCTGCCTCATGGAAATGCCTTTTTTAAAATGTAGGTTTGTAG i dasNov3.JH563638 C 0 I 375 a score=579423.000000 s hg38.chr19_GL383574v1_alt 155294 37 + 155864 AACTCCACTATTTTTATACCTAGCTACAGTTTTGA---G-----A s panTro5.chr19 36222821 37 + 61309027 AACTCCACTATTTTTATACCTAGCTACAGTTTTGA---G-----A i panTro5.chr19 C 0 C 0 s panPan2.chr19 39967036 37 + 64411610 AACTCCACTATTTTTATACCTAGCTACAGTTTTGA---G-----A i panPan2.chr19 C 0 C 0 s gorGor5.CYUI01015150v1 6378277 37 - 8369475 AACTCCACTATTTTTATACCTAGCTACAGTTTTGA---G-----A i gorGor5.CYUI01015150v1 C 0 C 0 s nomLeu3.chr10 63976609 37 - 106955855 AACTCCACTATTTTTATACCTAGCTACAGTTTTGA---G-----A i nomLeu3.chr10 C 0 C 0 s rheMac8.chr19 30291840 37 + 53671032 AACTCCGCTATTTTTATACCTAGCTACAGTTTTGA---G-----A i rheMac8.chr19 C 0 C 0 s macFas5.chr19 34746006 37 + 59248254 AACTCCGCTATTTTTATACCTAGCTACAGTTTTGA---G-----A i macFas5.chr19 C 0 C 0 s macNem1.NW_012011689v1 4621490 37 - 13342542 AACTCCGCTATTTTTATACCTAGCTACAGTTTTGA---G-----A i macNem1.NW_012011689v1 C 0 C 0 s cerAty1.NW_012005268v1 5543248 37 + 7714307 AACTCCGCTATTTTTATACCTAGCTACAGTTTTGA---G-----A i cerAty1.NW_012005268v1 C 0 C 0 s chlSab2.chr6 29345962 37 + 50890351 AACTCCGCTATTTTTATACCTAGCCACAGTTTTGA---G-----A i chlSab2.chr6 C 0 C 0 s manLeu1.NW_012102454v1 978643 37 - 2385121 AACTCCGCTATTTTTATACCTAGCTACAGTTTTGA---G-----A i manLeu1.NW_012102454v1 C 0 C 0 s colAng1.NW_012111697v1 2420931 37 + 4274983 AACTCCACTATTTTTATACCTAGCTACAGTCTTGA---G-----A i colAng1.NW_012111697v1 C 0 C 0 s calJac3.chr22 28623044 37 + 49145316 AACTTCACTATTTTTATACCTAGCTACAGTTTTGA---G-----A i calJac3.chr22 C 0 C 0 s saiBol1.JH378197 5478183 37 + 8899380 AACTCCACTATTTTTATACCTAGCCACAGTTTAGA---G-----A i saiBol1.JH378197 C 0 C 0 s cebCap1.NW_016107633v1 1684942 37 - 2680843 AACTCCACTATTTTTATACCTAGCTACAGTTTTGA---G-----A i cebCap1.NW_016107633v1 C 0 C 0 s aotNan1.NW_018505377v1 426543 37 - 4471408 AACTCCACTATTTTTATACCTAGCTACAGTTTTGA---G-----A i aotNan1.NW_018505377v1 C 0 C 0 s micMur3.chr22 4006391 40 - 30143674 AACTCCACTATTTTTATACCTAGCTACCACTTTGGGAAA-----A i micMur3.chr22 C 0 C 0 s proCoq1.NW_012149263v1 627048 37 + 2501019 AACTCCGCTATTTTTATACCTAGCTACCACTTTGG---A-----A i proCoq1.NW_012149263v1 C 0 C 0 s mm10.chr7 111156166 37 - 145441459 AACTCCACTATTTTTATACCTAGCTACAGTTTTGG---A-----A i mm10.chr7 C 0 C 0 s canFam3.chr1 4673045 42 - 122678785 AACTCCGCTATTTTTATACCTAGCTACAGCTTGGG---GGAAAAA i canFam3.chr1 C 0 C 0 e dasNov3.JH563638 413580 375 + 643850 I a score=9903189.000000 s hg38.chr19_GL383574v1_alt 155331 533 + 155864 AAGAAGAA-----TCAGAACCCTGACCCACTTACGGTTGCTGGGACAATTCCCCCTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAATACCCGATGCCTGAGCTGGGCCGAGCACTGAGTGCTCCCCTGGCATCCACGGCCACCACTGCCCCCCTGGGCAGTCTGACCGCTGCAGGCAGCTGCCACCATGCCATGCCCCACACTACTCCTATCGCCGACATCCAGCAGGGCATCTCCAAGTATCTGGATGCCCTGAACGTCTTCTGCCGTGCCAGTACTTTCCTCACAGATCTCTTCAGCACTGTGTTCAGGAACTCTCACTACTCAAAGGCAGCCACACAGCTCAAAGATGTGCAGGAGCATGTCATGGAAGCAGCCAGTCGGCTGACCTCGGCCATAAAGCCTGAGATCGCCAAGATGCTAATGGAACTTAGTGCTGGGGCTGCAAATTTTACGGATCAGAAGGAATTC s panTro5.chr19 36222858 533 + 61309027 AAGAAGAA-----TCAGAACCCTGACCCACTTACGGTTGCTGGGACAATTCCCCCTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCTGAGCTGGGCCGAGCACTGAGTGCTCCCCTGGCATCCACGGCCACCACTGCCCCCCTGGGCAGTCTGACCACTGCAGGCAGCTGCCACCATGCCATGCCCCACACTACTCCTATCGCCGACATCCAGCAGGGCATCTCCAAGTATCTGGATGCCCTGAACGTCTTCTGCCGTGCCAGTACTTTCCTCACAGATCTCTTCAGCACTGTGTTCAGGAACTCTCACTACTCAAAGGCAGCCACACAGCTCAAAGATGTGCAGGAGCATGTCATGGAAGCAGCCAGTCGGCTGACCTCGGCCATAAAGCCTGAGATCGCCAAGATGCTAATGGAACTTAGTGCTGGGGCTGCAAATTTTACGGATCAGAAGGAATTC i panTro5.chr19 C 0 N 0 s panPan2.chr19 39967073 533 + 64411610 AAGAAGAA-----TCAGAACCCTGACCCACTTACGGTTGCTGGGACAATTCCCCCTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCTGAGCTGGGCCGAGCACTGAGTGCTCCCCTGGCATCCACGGCCACCACTGCCCCCCTGGGCAGTCTGACCACTGCAGGCAGCTGCCACCATGCCATGCCCCACACTACTCCTATCGCTGACATCCAGCAGGGCATCTCCAAGTATCTGGATGCCCTGAACGTCTTCTGCCGTGCCAGTACTTTCCTCACAGATCTCTTCAGCACTGTGTTCAGGAACTCTCACTACTCAAAGGCAGCCACACAGCTCAAAGATGTGCAGGAGCATGTCATGGAAGCAGCCAGTCGGCTGACCTCGGCCATAAAGCCTGAGATCGCCAAGATGCTAATGGAACTTAGTGCTGGGGCTGCAAATTTTACGGATCAGAAGGAATTC i panPan2.chr19 C 0 N 0 s gorGor5.CYUI01015150v1 6378314 532 - 8369475 AAGAAGAA-----TCAGAACCCTGACCCACTTACGGTTGCTGGGACAATTCCCCCTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCTGAGCTGGGCCGAGCACTGAGTGCTCCCCTGGCATCCACGGCCACCACTG-CCCCCTGGGCAGTCTGACTGCTGCAGGCAGCTGCCACCATGCCATGCCCCACACTACTCCTATCGCCGACATCCAGCAGGGCATCTCCAAGTATCTGGATGCCCTGAACGTCTTCTGCCGTGCCAGTACTTTCCTCACAGATCTCTTCAGCACTGTGTTCAGGAACTCTCACTATTCAAAGGCAGCCACACAGCTCAAAGATGTGCAGGAGCATGTCATGGAAGCAGCCAGTCGGCTGACCTCGGCCATAAAGCCTGAGATCGCCAAGATGCTAATGGAACTTAGTGCTGGGGCTGCAAATTTTACGGATCAGAAGGAATTC i gorGor5.CYUI01015150v1 C 0 N 0 s nomLeu3.chr10 63976646 533 - 106955855 AAGAAGAA-----TCAGAACCCTGACCTGCTTACGGTTGCTGGGACAATTCCCCCTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCTGAGCTGGGCCGAGCACTGAGTGCTCCCCTGGCATCCACGGCCACCACTGCCCCCCTGGGCAGTCTGACCGCTGCAGGCAGCTGCCACCATGCCATGCCCCACTCTACTCCTATCGCCGACATCCAGCAGGGCATCTCCAAGTATCTGGATGCCCTGAACGTCTTCTGCCGTGCCAGTACTTTCCTCACAGATCTCTTCAGCACTGTGTTCAGGAACTCTCACTACTCAAAGGCAGCCACGCAGCTCAAAGATGTGCAGGAGCATGTCATGGAAGCAGCCAGTCGGCTGACCTCAGCCATAAAACCTGAGATCGCCAAGATGCTAATGGAACTTAGTGCTGGGGCTGCAAATTTTACAGATCAAAAGGAATTC i nomLeu3.chr10 C 0 N 0 s rheMac8.chr19 30291877 533 + 53671032 AAGAAGAA-----TCAGAACCCTGACCCGCTTACGGTCGCTGGGACAATTCCCTCTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCCGAGCTGGGCCGAGCGCTGAGTGCTCCCCTGGCATCCACAGCCACCACTGCCCCCCTGGGCAGTCTGACTGCTGCAGGCAGCTGCCACCATGCCATGCCCCACTCCACTCCCATCGCCGATATCCAGCAGGGCATCTCCAAGTATCTGGATGCCCTGAACGTCTTCTGCCGCGCCAGTACTTTTCTCACAGATCTCTTCAGCACTGTGTTCAGGAACTCTCACTACTCAAAGGCAGCCACGCAGCTCAAAGATGTGCAAGAGCATGTCATGGAAGCAGCCAGTCGGCTGACCTCGGCCATAAAGCCTGAGATCGCCAAGATGCTAATGGAACTTAGTGCTGGGGCCGCAAATTTTACGGATCAAAAGGAATTC i rheMac8.chr19 C 0 N 0 s macFas5.chr19 34746043 533 + 59248254 AAGAAGAA-----TCAGAACCCTGACCCGCTTACGGTCGCTGGGACAATTCCCTCTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCCGAGCTGGGCCGAGCGCTGAGTGCTCCCCTGGCATCCACAGCCACCACTGCCCCCCTGGGCAGTCTGACTGCTGCAGGCAGCTGCCACCATGCCATGCCCCACTCCACTCCCATCGCCGATATCCAGCAGGGCATCTCCAAGTATCTGGATGCCCTGAACGTCTTCTGCCGCGCCAGTACTTTTCTCACAGATCTCTTCAGCACTGTGTTCAGGAACTCTCACTACTCAAAGGCAGCCACGCAGCTCAAAGATGTGCAAGAGCATGTCATGGAAGCAGCCAGTCGGCTGACCTCGGCCATAAAGCCTGAGATCGCCAAGATGCTAATGGAACTTAGTGCTGGGGCCGCAAATTTTACGGATCAAAAGGAATTC i macFas5.chr19 C 0 N 0 s macNem1.NW_012011689v1 4621527 533 - 13342542 AAGAAGAA-----TCAGAACCCTGACCCGCTTACGGTCGCTGGGACAATTCCCTCTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCCGAGCTGGGCCGAGCGCTGAGTGCTCCCCTGGCATCCACAGCCACCACTGCCCCCCTGGGCAGTCTGACTGCTGCAGGCAGCTGCCACCATGCCATGCCCCACTCCACTCCCATCGCCGATATCCAGCAGGGCATCTCCAAGTATCTGGATGCCCTGAACGTCTTCTGCCGCGCCAGTACTTTTCTCACAGATCTCTTCAGCACTGTGTTCAGGAACTCTCACTACTCAAAGGCAGCCATGCAGCTCAAAGATGTGCAAGAGCATGTCATGGAAGCAGCCAGTCGGCTGACCTCGGCCATAAAGCCTGAGATCGCCAAGATGCTAATGGAACTTAGTGCTGGGGCCGCAAATTTTACGGATCAAAAGGAATTC i macNem1.NW_012011689v1 C 0 N 0 s cerAty1.NW_012005268v1 5543285 533 + 7714307 AAGAAGAA-----TCAGAACCCTGACCCGCTTACGGTCGCTGGGACAATTCCCTCTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCCGAGCTGGGCCGAGCGCTGAGTGCTCCCCTGGCATCCACAGCCACCACTGCCCCCCTGGGCAGTCTGACTGCTGCAGGCAGCTGCCACCATGCCATGCCCCACTCCACTCCCATCGCCGATATCCAGCAGGGCATCTCCAAGTATCTGGATGCCCTGAACGTCTTCTGCCGCGCCAGTACTTTTCTCACAGATCTCTTCAGCACTGTGTTCAGAAACTCTCACTACTCAAAGGCAGCCACGCAGCTCAAAGATGTGCAAGAGCATGTCATGGAAGCAGCCAGTCGGCTGACCTCGGCCATAAAGCCTGAGATCGCCAAGATGCTAATGGAACTTAGTGCTGGGGCCGCAAATTTTACGGATCAAAAGGAATTC i cerAty1.NW_012005268v1 C 0 N 0 s chlSab2.chr6 29345999 533 + 50890351 AAGAAGAA-----TCAGAACCCTGACCCGCTTACGGTCGCTGGGACAGTTCCCTCTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCCGAGCTAGGCCGAGCGCTGAGTGCTCCCCTGGCATCCACAGCCACCACTGTCCCCCTGGGCAGTCTGACTGCTGCAGGCAGCTGCCACCATGCCATGCCCCACTCCACTCCCATCGCCGATATCCAGCAGGGCATCTCCAAGTATCTGGATGCCCTGAACGTCTTCTGCCGCGCCAGTACTTTTCTCACAGATCTCTTCAGCACTGTGTTCAGGAACTCTCACTACTCAAAGGCAGCCACGCAGCTCAAAGATGTGCAAGAGCATGTTATGGAAGCAGCCAGTCGGCTGACCTCGGCCATAAAGCCTGAGATCGCCAAGATGCTAATGGAACTTAGTGCTGGGGCCGCAAATTTTACGGATCAAAAGGAATTC i chlSab2.chr6 C 0 N 0 s manLeu1.NW_012102454v1 978680 533 - 2385121 AAGAAGAA-----TCAGAACCCTGACCCGCTTACGGTCGCTGGGACAATTCCCTCTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCCGAGCTGGGCCGAGCGCTGAGTGCTCCCCTGGCATCCACAGCCACCACTGCCCCCCTGGGCAGTCTGACTGCTGCAGGCAGCTGCCACCATGCCATGCCCCACTCCACTCCCATCGCTGATATCCAGCAGGGCATCTCCAAGTATCTGGATGCCCTGAACGTCTTCTGCCGCGCCAGTACTTTTCTCACAGATCTCTTCAGCACTGTGTTCAGGAACTCTCACTACTCAAAGGCAGCCACGCAGCTCAAAGATGTGCAAGAGCATGTCATGGAAGCAGCCAGTCGGCTGACCTCGGCCATAAAGCCTGAGATCGCCAAGATGCTAATGGAACTTAGTGCTGGGGCCGCAAATTTTACGGATCAAAAGGAATTC i manLeu1.NW_012102454v1 C 0 N 0 s colAng1.NW_012111697v1 2420968 533 + 4274983 AAGAAGAA-----TCAGAACCCTGACCCGCTTACGGTCGCTGGGACAATTCCCTCTCACGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCCGAGCTGGGCCGAGCGCTGAGTGCTCCCCTGGCATCCACAGCCACCACTGCCCCCCTGGGCAGTCTGACTGCTGCAGGCAGCTGCCACCATGCCATGCCCCACTCCACTCCCATCGCCGATATCCAGCAGGGCATCTCCAAGTATCTGGATGCCCTGAACGTCTTCTGCCGCGCCAGTACTTTTCTCACAGATCTCTTCAGCACTGTGTTCAGGAACTCTCACTACTCAAAGGCAGCCACGCAGCTCAAAGATGTGCAAGAGCATGTCATGGAAGCAGCCAGTCGGCTGACCTCGGCCATAAAGCCTGAGATCGCCAAGATGCTAATGGAACTTAGTGCTGGGGCCGCAAATTTTACGGATCAGAAGGAATTC i colAng1.NW_012111697v1 C 0 N 0 s calJac3.chr22 28623081 533 + 49145316 AAAAAGAA-----TCGGAACCCTGACCCGCTCACGGTTGCTGGGACATTTCCCCCTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCTGAGCTGGGCCGAGCACTGAGTGCTCCCCTGGCATCCACGGCCACCACTGCCCCCCTGGGCAGTCTGACCACTGCAGGCAGTTGCCACCATGCCATGCCCCACTCCACTCCCATCGCTGACATCCAGCAGGGCATCTCCAAGTATTTGGATGCCCTGAACGTCTTCTGCCGTGCCAGTACTTTCCTCACAGATCTCTTCAGCACTGTGTTCAGAAACTCTCACTACTCAAAGGCAGCCACACAGCTCAAAGATGTGCAGGAGCATGTCATGGAAGCAGCCAGTCGGCTCACCTCGGCCATAAAGCCCGAGATCGCCAAGATGCTGATGGAACTTAGTGCTGGGGCCGCAAATTTTACAGATCAAAAGGAATTC i calJac3.chr22 C 0 N 0 s saiBol1.JH378197 5478220 533 + 8899380 AAAAAGAA-----TCAGAACCCTGACCTGCTCACGGTCACTGGGACATTTCCCCCTCCCGCATGTATTGCTGCAGCGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCTGAGCTGGGCCGAGCACTGAGTGCTCCCCTGGCATCCACGGCCACCACTGCCCCCCTGGGCAGTCTGACCGCTGCAGGCAGCTGCCACCATGCCATGCCCCACTCCACTCCCATCGCTGATATCCAGCAGGGCATTTCCAAGTATCTGGATGCCCTGAACGTCTTCTGCCGTGCCAGTACTTTCCTCACAGATCTCTTCAGCACTGTGTTCAGAAACTCTCACTACTCAAAGGCAGCCACGCAGCTCAAAGATGTGCAGGAGCACGTCATGGAAGCAGCCAGTCGGCTCACCTCAGCCATAAAGCCAGAGATCGCCAAGATGCTGATGGAACTTAGTGCTGGGGCTGCAAATTTTACAGATCAAAAGGAATTC i saiBol1.JH378197 C 0 N 0 s cebCap1.NW_016107633v1 1684979 533 - 2680843 AAAAAGAA-----TCAGAACCCTGACCCGCTCACGGTCACTGGGACATTTCCCCCTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCTGAGCTGGGCCGAGCACTGAGTGCTCCCCTGGCATCCACGGCCACCACTGCCCCCCTGGGCAGTCTGACTGCTGCAGGCAGCTGCCACCATGCCATGCCCCACTCCACTCCCATCGCTGACATCCAGCAGGGCATCTCCAAGTATCTGGATGCCCTGAACGTCTTCTGCCGTGCCAGTACTTTCCTCACAGATCTCTTCAGCACTGTGTTCAGAAACTCTCACTACTCAAAGGCAGCCACGCAGCTCAAAGATGTGCAGGAGCACGTCATGGAAGCAGCCAGTCGGCTCACCTCGGCCATAAAGCCCGAGATCGCCAAGATGCTGATGGAACTTAGTGCTGGGGCCGCAAATTTTACAGATCAAAAGGAATTC i cebCap1.NW_016107633v1 C 0 N 0 s aotNan1.NW_018505377v1 426580 533 - 4471408 AAAAAGAA-----TCAGAACCCTGACCCGCTCACGGTTGCTGCGACATTTCCCCCTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCTGAGCTGGGCCGAGCACTGAGTGCTCCCCTGGCATCCACGGCCACCACTGCCCCCCTGGGCAGTCTGACCGCTGCAGGCAGCTGCCACCATGCCATGCCCCACTCCACTCCCATCGCTGACATCCAGCAGGGCATCTCCAAGTATCTGGATGCCCTGAACGTCTTCTGCCGTGCCAGTACTTTCCTCACAGATCTCTTCAGCACTGTGTTCAGAAACTCTCACTACTCAAAGGCAGCCACGCAGCTCAAAGATGTGCAGGAGCACGTCATGGAAGCAGCCAGTCGGCTCACCTCGGCCATAAAGCCCGAGATTGCCAAGATGCTGATGGAACTTAGTGCTGGGGCTGCAAATTTTACAGATCAAAAGGAATTC i aotNan1.NW_018505377v1 C 0 N 0 s micMur3.chr22 4006431 532 - 30143674 AAAAAGAA-----TCAGAACCCTGACCTACTCAGGGTCACTGGGACAG-TCTCTCTCCCGTATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCTTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCCGAGCTGGGCCGAGCACTGAGTGCTCCCCTGGCATCTACAGCCACCACTGCCCCCCTGGGCAGTCTGACCGCTGCAGGCAGCTGCCACCACGCCATGCCCCACTCCACTCCCATCGCCGACATCCAGCAGGGCATCTCTAAGTACCTGGATGCCCTCAACGTCTTCTGCCGTGCCAGTACTTTCCTCACAGATCTTTTCAGCACTGTGTTCAGGAACTCTCACTACTCAAAGGCGGCCATGCAGCTCAAAGACGTGCAGGAGCACGTCATGGAAGCAGCCAGTCGGCTGACCTCGGCCATAAAGCCTGAGATCGCCAAAATGCTGATGGAACTCAGTGCTGGGGCTGCAAACTTTACCGATCAGAAGGAATTC i micMur3.chr22 C 0 N 0 s proCoq1.NW_012149263v1 627085 532 + 2501019 AAAAAGAA-----TCAGAACCCTGACCTACTCAGGGTCACTGGGACAG-TCTCTCTCCCGTATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCTTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCCGAGCTGGGCCGAGCACTGAGTGCTCCCCTGGCATCTACAGCCACCACTGCCCCCCTGAGCAGTCTGACCGCTGCAGGCAGCTGCCACCACGCCATGCCCCACTCCACTCCCATCGCCGACATCCAGCAGGGCATCTCTAAGTACCTGGATGCCCTCAACGTCTTCTGCCGTGCCAGTACTTTCCTCACAGATCTTTTCAGCACTGTGTTCAGGAACTCTCACTACTCAAAGGCGGCCATGCAGCTCAAAGACGTGCAGGAGCACGTCATGGAAGCAGCCAGTCGGCTGACCTCGGCCATAAAGCCTGAGATCGCCAAAATGCTGATGGAACTCAGTGCTGGGGCTGCAAACTTTACCGATCAGAAGGAATTC i proCoq1.NW_012149263v1 C 0 N 0 s mm10.chr7 111156203 537 - 145441459 AAAAAAAAAGGACTCAGAACCCTGACCTGCCAGTGGTCCCCGGGACAGTTCCC-CACCCGTATGTATTGCTGCAGTGCCCAGGACAATAAGATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAGCAGCACCAGCAGTACCCGATGCCTGAGCTGGGCCGAGCACTGAGCGCTCCCCTGGCATCCACCGCCCCCTCTGCCCCGCTGGGCAGTCTGACCGCTGCAGGCAGCTGCCACCATGCCATGCCCCACTCTACTCCCATTGCTGACATCCAGCAGGGCATCTCTAAGTACCTGGATGCCCTCAATGTCTTTTGCCGTGCTAGTACGTTCCTCACAGATCTCTTCAGCACCGTGTTCAGGAACTCACACTACTCAAAGGCCGCCATGCAGCTCAAAGATGTGCAGGAACATGTAATGGAAGCAGCCAGCAGATTGACCTCAGCCATAAAGCCCGAGATTGCCAAGATGCTCATGGAACTCAGTGCTGGGGCTGCAAACTTCACAGATCAGAAGGAATTC i mm10.chr7 C 0 N 0 s canFam3.chr1 4673087 533 - 122678785 AAAAGGAA-----TCAGAACCCTGCCCTCTGCTCAGTCACTGGGACAGTTCTCCCTCCCGCATGTATTGCTGCAGTGCCCAGGACAGTAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAAGTGCAGCAGCACCAGCAGTACCCGATGCCTGAGCTGGGCCGAGCACTGAGTGCTCCCCTGGCGTCGACGGCCACCGCTGCCCCTCTGGGCAGCCTGACTGCTGCAGGCAGCTGCCACCATGCCATGCCCCACTCCACTCCCATCGCTGACATCCAGCAGGGCATCTCCAAGTACCTGGATGCCCTCAACGTCTTCTGCCGTGCCAGTACCTTCCTCACAGATCTCTTCAGCACTGTGTTCAGGAACTCTCACTACTCCAAGGCCGCCATGCAGCTTAAAGATGTACAGGAGCATGTCATGGAAGCAGCTAGTCGGCTGACTTCCGCCATAAAGCCCGAGATCGCCAAGATGCTGATGGAACTTAGTGCTGGGGCCGCAAACTTTACAGATCAGAAGGAATTC i canFam3.chr1 C 0 N 0 s dasNov3.JH563638 413955 532 + 643850 AAAAAGCA-----TCAGAACCCTGATCCACTCACGGCCTCTGGGACAACTTCC-CTCCCGCATGTATTGCTGCAGTGCCCAGGACAATAAAATGGACTACAAGCGGCGCTTCCTGCTTGGCGGGTCCAAGCAGAAGGTGCAACAGCACCAGCAGTATCCAATGCCTGAGCTGGGCCGAGCATTGAGCACTCCCCTGGCATCTACAAGCACCACCGCCCCCCTGGGTAGTCTGACTGCTGCAGGCAGCTGCCACCATGCCATGTCCCACTCCACCCCCATTGCCGACATCCAGCAGGGCATCTCCAAGTACCTGGATGCCCTTAACGTCTTCTGCCGTGCCAGTACTTTCCTCACAGACCTCTTCAGCACTGTGTTCAGGAACTCTCATTACTCCAAGGCAGCCATGCAGCTCAAAGATGTGCAGGAGCATGTCATGGAAGCAGCCAGCCGCCTGACCTCGGCCATAAAGCCCGAGATCGCCAAGATGCTGATGGAACTTAGTGCTGGGGCTGCAAACTTTACTGATCAGAAGGAATTC i dasNov3.JH563638 I 375 N 0